Y11_33811 088867c833b3583aa40ceff6a299218c 211 Pfam PF01548 Transposase 16 156 1.3E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_30511 3ecdc8303ac9b87cf8a78a5a08bb73b2 462 SUPERFAMILY SSF53383 72 344 1.21E-42 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_30511 3ecdc8303ac9b87cf8a78a5a08bb73b2 462 Pfam PF12390 Selenocysteine synthase N terminal 9 48 3.5E-8 T 13-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Y11_30511 3ecdc8303ac9b87cf8a78a5a08bb73b2 462 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 456 1.6E-180 T 13-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Y11_30511 3ecdc8303ac9b87cf8a78a5a08bb73b2 462 Gene3D G3DSA:3.90.1150.110 11 452 1.5E-152 T 13-10-2018 Y11_30511 3ecdc8303ac9b87cf8a78a5a08bb73b2 462 Pfam PF03841 L-seryl-tRNA selenium transferase 82 450 1.3E-167 T 13-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Y11_30511 3ecdc8303ac9b87cf8a78a5a08bb73b2 462 Gene3D G3DSA:3.40.640.10 94 358 1.5E-152 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_30511 3ecdc8303ac9b87cf8a78a5a08bb73b2 462 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 462 242.08 T 13-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Y11_02951 e06f466574f83ff494d7a8839856c175 597 PIRSF PIRSF004950 6 597 3.7E-238 T 13-10-2018 IPR012159 Inner membrane protein YejM Y11_02951 e06f466574f83ff494d7a8839856c175 597 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 5.6E-107 T 13-10-2018 IPR024588 Inner membrane protein YejM, N-terminal Y11_02951 e06f466574f83ff494d7a8839856c175 597 Gene3D G3DSA:3.40.720.10 251 523 1.7E-37 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Y11_02951 e06f466574f83ff494d7a8839856c175 597 Pfam PF00884 Sulfatase 260 511 1.3E-22 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Y11_02951 e06f466574f83ff494d7a8839856c175 597 SUPERFAMILY SSF53649 257 580 2.97E-48 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 Pfam PF13492 GAF domain 569 646 1.6E-11 T 13-10-2018 IPR003018 GAF domain GO:0005515 Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 231 6.5E-99 T 13-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 SUPERFAMILY SSF55874 721 887 3.93E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 SMART SM00387 776 886 8.8E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 PRINTS PR00344 Bacterial sensor protein C-terminal signature 831 841 2.2E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 PRINTS PR00344 Bacterial sensor protein C-terminal signature 813 827 2.2E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 PRINTS PR00344 Bacterial sensor protein C-terminal signature 870 883 2.2E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 PRINTS PR00344 Bacterial sensor protein C-terminal signature 846 864 2.2E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 Pfam PF13493 Domain of unknown function (DUF4118) 404 508 3.2E-30 T 13-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 Gene3D G3DSA:3.40.50.300 20 230 3.4E-102 T 13-10-2018 Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 Gene3D G3DSA:3.30.565.10 738 891 2.8E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 Gene3D G3DSA:1.20.120.620 397 503 6.2E-39 T 13-10-2018 IPR038318 KdpD, transmembrane domain superfamily Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 Gene3D G3DSA:3.40.50.620 238 364 1.9E-6 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 778 886 1.1E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 Gene3D G3DSA:3.30.450.40 512 654 1.6E-35 T 13-10-2018 IPR029016 GAF-like domain superfamily Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 SUPERFAMILY SSF47384 660 733 2.55E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 Gene3D G3DSA:1.10.287.130 655 734 6.1E-14 T 13-10-2018 Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 SUPERFAMILY SSF55781 510 658 4.71E-6 T 13-10-2018 Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 SMART SM00388 665 732 7.3E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 SUPERFAMILY SSF52402 254 361 5.61E-8 T 13-10-2018 Y11_18831 4a27ab03c8752eec40eda86aa2666c6b 899 Pfam PF00512 His Kinase A (phospho-acceptor) domain 666 732 2.2E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_00961 86b441a71b825c9f98a5a7f121cd7679 566 SUPERFAMILY SSF55874 413 549 1.7E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_00961 86b441a71b825c9f98a5a7f121cd7679 566 Gene3D G3DSA:1.10.1760.20 44 204 1.3E-10 T 13-10-2018 Y11_00961 86b441a71b825c9f98a5a7f121cd7679 566 SUPERFAMILY SSF55781 226 345 2.27E-6 T 13-10-2018 Y11_00961 86b441a71b825c9f98a5a7f121cd7679 566 Pfam PF06580 Histidine kinase 359 437 7.7E-25 T 13-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Y11_00961 86b441a71b825c9f98a5a7f121cd7679 566 SMART SM00387 451 553 1.5E-5 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_00961 86b441a71b825c9f98a5a7f121cd7679 566 Pfam PF07694 5TMR of 5TMR-LYT 28 193 7.0E-46 T 13-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 Y11_00961 86b441a71b825c9f98a5a7f121cd7679 566 Gene3D G3DSA:3.30.565.10 411 556 2.9E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_00961 86b441a71b825c9f98a5a7f121cd7679 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 455 550 2.2E-7 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_00961 86b441a71b825c9f98a5a7f121cd7679 566 Gene3D G3DSA:3.30.450.40 228 378 3.4E-5 T 13-10-2018 IPR029016 GAF-like domain superfamily Y11_40641 e40813c289e22724171e74ab686107f5 228 SUPERFAMILY SSF52980 10 227 8.58E-83 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Y11_40641 e40813c289e22724171e74ab686107f5 228 SMART SM00927 59 157 3.4E-66 T 13-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 Y11_40641 e40813c289e22724171e74ab686107f5 228 Gene3D G3DSA:3.40.600.10 6 228 6.5E-54 T 13-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 Y11_40641 e40813c289e22724171e74ab686107f5 228 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 11 226 8.1E-107 T 13-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 Y11_40641 e40813c289e22724171e74ab686107f5 228 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 228 154.662 T 13-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 Y11_40641 e40813c289e22724171e74ab686107f5 228 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 1.8E-34 T 13-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 Y11_43021 65748e7a4a1db6efa6b039d3d8955361 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.1E-194 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Y11_43021 65748e7a4a1db6efa6b039d3d8955361 487 Pfam PF00571 CBS domain 149 202 1.2E-4 T 13-10-2018 IPR000644 CBS domain Y11_43021 65748e7a4a1db6efa6b039d3d8955361 487 Pfam PF00571 CBS domain 95 140 1.1E-7 T 13-10-2018 IPR000644 CBS domain Y11_43021 65748e7a4a1db6efa6b039d3d8955361 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.7E-159 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Y11_43021 65748e7a4a1db6efa6b039d3d8955361 487 SUPERFAMILY SSF54631 95 203 1.15E-24 T 13-10-2018 Y11_43021 65748e7a4a1db6efa6b039d3d8955361 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 13-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Y11_43021 65748e7a4a1db6efa6b039d3d8955361 487 SMART SM00116 158 206 4.5E-8 T 13-10-2018 IPR000644 CBS domain Y11_43021 65748e7a4a1db6efa6b039d3d8955361 487 SMART SM00116 96 144 7.2E-9 T 13-10-2018 IPR000644 CBS domain Y11_43021 65748e7a4a1db6efa6b039d3d8955361 487 PIRSF PIRSF000130 1 487 1.5E-194 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Y11_43021 65748e7a4a1db6efa6b039d3d8955361 487 SUPERFAMILY SSF51412 1 477 2.09E-123 T 13-10-2018 Y11_43021 65748e7a4a1db6efa6b039d3d8955361 487 Gene3D G3DSA:3.20.20.70 1 486 6.2E-205 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_43021 65748e7a4a1db6efa6b039d3d8955361 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 83.67 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Y11_43021 65748e7a4a1db6efa6b039d3d8955361 487 SMART SM01240 7 473 0.0 T 13-10-2018 Y11_28781 6a1a95495a50273c49d0f33ccd527f99 156 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 146 1.8E-69 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Y11_28781 6a1a95495a50273c49d0f33ccd527f99 156 Pfam PF02556 Preprotein translocase subunit SecB 5 144 1.2E-57 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Y11_28781 6a1a95495a50273c49d0f33ccd527f99 156 Gene3D G3DSA:3.10.420.10 1 153 5.6E-63 T 13-10-2018 IPR035958 SecB-like superfamily Y11_28781 6a1a95495a50273c49d0f33ccd527f99 156 SUPERFAMILY SSF54611 2 141 1.0E-53 T 13-10-2018 IPR035958 SecB-like superfamily Y11_28781 6a1a95495a50273c49d0f33ccd527f99 156 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.682 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Y11_28781 6a1a95495a50273c49d0f33ccd527f99 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 8.4E-42 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Y11_28781 6a1a95495a50273c49d0f33ccd527f99 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 8.4E-42 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Y11_28781 6a1a95495a50273c49d0f33ccd527f99 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 8.4E-42 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Y11_28781 6a1a95495a50273c49d0f33ccd527f99 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 8.4E-42 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Y11_41601 effd5fb22b8e1c0c67ab03ba39683de6 484 SMART SM00345 23 82 8.1E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_41601 effd5fb22b8e1c0c67ab03ba39683de6 484 Pfam PF00155 Aminotransferase class I and II 152 423 1.4E-19 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_41601 effd5fb22b8e1c0c67ab03ba39683de6 484 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 82 2.1E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_41601 effd5fb22b8e1c0c67ab03ba39683de6 484 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 7.4E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_41601 effd5fb22b8e1c0c67ab03ba39683de6 484 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 7.4E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_41601 effd5fb22b8e1c0c67ab03ba39683de6 484 SUPERFAMILY SSF53383 79 478 1.99E-79 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_41601 effd5fb22b8e1c0c67ab03ba39683de6 484 Gene3D G3DSA:1.10.10.10 7 88 6.3E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_41601 effd5fb22b8e1c0c67ab03ba39683de6 484 SUPERFAMILY SSF46785 12 85 4.99E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_41601 effd5fb22b8e1c0c67ab03ba39683de6 484 Gene3D G3DSA:3.40.640.10 106 473 3.2E-110 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_12511 76f77be47fe616e6957d5b8695db295e 284 Gene3D G3DSA:3.20.20.70 1 284 2.3E-99 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_12511 76f77be47fe616e6957d5b8695db295e 284 Pfam PF00793 DAHP synthetase I family 10 275 1.9E-68 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Y11_12511 76f77be47fe616e6957d5b8695db295e 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 1.3E-119 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Y11_12511 76f77be47fe616e6957d5b8695db295e 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.315 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Y11_12511 76f77be47fe616e6957d5b8695db295e 284 SUPERFAMILY SSF51569 3 278 6.41E-104 T 13-10-2018 Y11_39871 100e16c389f68985188203d3b7167183 389 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 13-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 Y11_39871 100e16c389f68985188203d3b7167183 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 9.5E-15 T 13-10-2018 Y11_39871 100e16c389f68985188203d3b7167183 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 9.5E-15 T 13-10-2018 Y11_39871 100e16c389f68985188203d3b7167183 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 9.5E-15 T 13-10-2018 Y11_39871 100e16c389f68985188203d3b7167183 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 9.5E-15 T 13-10-2018 Y11_39871 100e16c389f68985188203d3b7167183 389 Pfam PF01494 FAD binding domain 2 340 2.6E-26 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 Y11_39871 100e16c389f68985188203d3b7167183 389 Gene3D G3DSA:3.30.9.50 78 267 6.0E-97 T 13-10-2018 Y11_39871 100e16c389f68985188203d3b7167183 389 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 385 1.1E-130 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Y11_39871 100e16c389f68985188203d3b7167183 389 SUPERFAMILY SSF51905 2 379 9.07E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_39871 100e16c389f68985188203d3b7167183 389 Gene3D G3DSA:3.50.50.60 3 333 6.0E-97 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_39871 100e16c389f68985188203d3b7167183 389 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 385 4.1E-146 T 13-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 Y11_07561 18117a867389ed4f46de8ff44f27ecad 242 Gene3D G3DSA:1.10.3720.10 4 229 2.2E-64 T 13-10-2018 IPR035906 MetI-like superfamily Y11_07561 18117a867389ed4f46de8ff44f27ecad 242 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 220 8.3E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_07561 18117a867389ed4f46de8ff44f27ecad 242 SUPERFAMILY SSF161098 2 219 4.06E-57 T 13-10-2018 IPR035906 MetI-like superfamily Y11_26261 5c2bfc845426d5dea3f6c18214c075d1 472 SUPERFAMILY SSF46548 7 157 8.37E-42 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Y11_26261 5c2bfc845426d5dea3f6c18214c075d1 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 1.1E-261 T 13-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 Y11_26261 5c2bfc845426d5dea3f6c18214c075d1 472 Gene3D G3DSA:1.10.1060.10 13 146 4.7E-35 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Y11_26261 5c2bfc845426d5dea3f6c18214c075d1 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 1.5E-37 T 13-10-2018 Y11_26261 5c2bfc845426d5dea3f6c18214c075d1 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.5E-37 T 13-10-2018 Y11_26261 5c2bfc845426d5dea3f6c18214c075d1 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.5E-37 T 13-10-2018 Y11_26261 5c2bfc845426d5dea3f6c18214c075d1 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.5E-37 T 13-10-2018 Y11_26261 5c2bfc845426d5dea3f6c18214c075d1 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 1.5E-37 T 13-10-2018 Y11_26261 5c2bfc845426d5dea3f6c18214c075d1 472 Gene3D G3DSA:3.50.50.60 147 210 2.0E-10 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_26261 5c2bfc845426d5dea3f6c18214c075d1 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 1.8E-24 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Y11_26261 5c2bfc845426d5dea3f6c18214c075d1 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 3.2E-38 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Y11_26261 5c2bfc845426d5dea3f6c18214c075d1 472 Gene3D G3DSA:3.50.50.60 248 400 1.2E-43 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_26261 5c2bfc845426d5dea3f6c18214c075d1 472 SUPERFAMILY SSF51971 145 401 8.83E-70 T 13-10-2018 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.141 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.1E-39 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.4E-76 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 2.3E-37 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 SUPERFAMILY SSF52440 558 676 1.28E-48 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 Gene3D G3DSA:1.10.1030.10 404 522 7.3E-39 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 Gene3D G3DSA:3.40.50.20 1 116 1.1E-50 T 13-10-2018 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 SUPERFAMILY SSF52335 939 1071 1.26E-34 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 SUPERFAMILY SSF52440 1 127 5.75E-50 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 Gene3D G3DSA:3.40.50.1380 937 1073 2.2E-35 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 SUPERFAMILY SSF56059 674 934 7.78E-104 T 13-10-2018 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.5E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.5E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.5E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.5E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.5E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.5E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.5E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 Gene3D G3DSA:3.40.50.20 524 663 3.4E-64 T 13-10-2018 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 SUPERFAMILY SSF48108 396 554 2.88E-53 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 SUPERFAMILY SSF56059 128 401 4.42E-109 T 13-10-2018 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 Gene3D G3DSA:3.30.470.20 666 936 5.2E-125 T 13-10-2018 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 Gene3D G3DSA:3.30.470.20 119 403 6.9E-132 T 13-10-2018 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.332 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 Pfam PF02142 MGS-like domain 957 1041 4.7E-18 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 SMART SM00851 956 1042 1.3E-30 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Y11_38531 0c468228b99f464c08692b1fec4e8048 1077 SMART SM01096 424 547 2.4E-74 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_20421 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 SUPERFAMILY SSF54909 62 151 1.74E-21 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Y11_20421 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 1.7E-20 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Y11_20421 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 1.1E-16 T 13-10-2018 Y11_20421 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 Gene3D G3DSA:3.30.70.920 55 139 9.7E-24 T 13-10-2018 Y11_20421 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 Gene3D G3DSA:1.10.10.10 3 54 8.6E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_20421 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 SUPERFAMILY SSF46785 2 92 2.63E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_20421 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 SMART SM00344 2 111 4.6E-37 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Y11_20421 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 4.6E-9 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Y11_20421 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 4.6E-9 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Y11_39341 48a1ce8bcaa60a4d34b94aab7ae7c8d9 335 SMART SM00342 247 330 3.4E-24 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_39341 48a1ce8bcaa60a4d34b94aab7ae7c8d9 335 SUPERFAMILY SSF46689 230 281 3.58E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_39341 48a1ce8bcaa60a4d34b94aab7ae7c8d9 335 Pfam PF12833 Helix-turn-helix domain 253 331 4.7E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_39341 48a1ce8bcaa60a4d34b94aab7ae7c8d9 335 SUPERFAMILY SSF46689 283 332 5.38E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_39341 48a1ce8bcaa60a4d34b94aab7ae7c8d9 335 Gene3D G3DSA:1.10.10.60 229 333 3.6E-24 T 13-10-2018 Y11_21101 0d6b3779db795504819db47dd72e820d 174 Hamap MF_01269 Shikimate kinase 2 [aroL]. 1 173 42.98 T 13-10-2018 IPR027544 Shikimate kinase 2 GO:0004765|GO:0009073 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Y11_21101 0d6b3779db795504819db47dd72e820d 174 SUPERFAMILY SSF52540 3 168 1.83E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_21101 0d6b3779db795504819db47dd72e820d 174 PRINTS PR01100 Shikimate kinase family signature 5 20 1.7E-22 T 13-10-2018 Y11_21101 0d6b3779db795504819db47dd72e820d 174 PRINTS PR01100 Shikimate kinase family signature 29 42 1.7E-22 T 13-10-2018 Y11_21101 0d6b3779db795504819db47dd72e820d 174 PRINTS PR01100 Shikimate kinase family signature 57 65 1.7E-22 T 13-10-2018 Y11_21101 0d6b3779db795504819db47dd72e820d 174 PRINTS PR01100 Shikimate kinase family signature 95 112 1.7E-22 T 13-10-2018 Y11_21101 0d6b3779db795504819db47dd72e820d 174 PRINTS PR01100 Shikimate kinase family signature 74 83 1.7E-22 T 13-10-2018 Y11_21101 0d6b3779db795504819db47dd72e820d 174 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 25.859 T 13-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Y11_21101 0d6b3779db795504819db47dd72e820d 174 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 13-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Y11_21101 0d6b3779db795504819db47dd72e820d 174 Pfam PF01202 Shikimate kinase 11 167 7.7E-49 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Y11_21101 0d6b3779db795504819db47dd72e820d 174 Gene3D G3DSA:3.40.50.300 1 170 6.8E-54 T 13-10-2018 Y11_04471 b04fc45fc9f8203805f02abc6b6d03ef 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 5.8E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Y11_04471 b04fc45fc9f8203805f02abc6b6d03ef 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 5.8E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Y11_04471 b04fc45fc9f8203805f02abc6b6d03ef 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 5.8E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Y11_04471 b04fc45fc9f8203805f02abc6b6d03ef 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 5.8E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Y11_04471 b04fc45fc9f8203805f02abc6b6d03ef 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 5.8E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Y11_04471 b04fc45fc9f8203805f02abc6b6d03ef 871 Gene3D G3DSA:2.60.40.1730 15 194 8.6E-71 T 13-10-2018 Y11_04471 b04fc45fc9f8203805f02abc6b6d03ef 871 SUPERFAMILY SSF63737 1 193 1.7E-49 T 13-10-2018 Y11_04471 b04fc45fc9f8203805f02abc6b6d03ef 871 SUPERFAMILY SSF55486 204 450 1.1E-73 T 13-10-2018 Y11_04471 b04fc45fc9f8203805f02abc6b6d03ef 871 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 444 544 3.7E-34 T 13-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold Y11_04471 b04fc45fc9f8203805f02abc6b6d03ef 871 Pfam PF01433 Peptidase family M1 domain 208 439 9.6E-59 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Y11_04471 b04fc45fc9f8203805f02abc6b6d03ef 871 Gene3D G3DSA:1.25.50.10 546 870 2.1E-126 T 13-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily Y11_04471 b04fc45fc9f8203805f02abc6b6d03ef 871 Gene3D G3DSA:1.10.390.10 280 443 5.3E-65 T 13-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily Y11_04471 b04fc45fc9f8203805f02abc6b6d03ef 871 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 13-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 Y11_04471 b04fc45fc9f8203805f02abc6b6d03ef 871 Gene3D G3DSA:2.60.40.1840 444 545 3.0E-36 T 13-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily Y11_04471 b04fc45fc9f8203805f02abc6b6d03ef 871 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 548 870 2.6E-122 T 13-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal Y11_04471 b04fc45fc9f8203805f02abc6b6d03ef 871 Gene3D G3DSA:1.10.1740.60 195 279 2.0E-40 T 13-10-2018 Y11_19011 434f5eb45e4c6b52877554e95dcad267 392 Pfam PF01047 MarR family 11 49 1.1E-6 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Y11_19011 434f5eb45e4c6b52877554e95dcad267 392 Gene3D G3DSA:3.30.420.40 196 364 3.9E-90 T 13-10-2018 Y11_19011 434f5eb45e4c6b52877554e95dcad267 392 Pfam PF00480 ROK family 74 378 5.7E-91 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Y11_19011 434f5eb45e4c6b52877554e95dcad267 392 SUPERFAMILY SSF46785 1 65 5.75E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_19011 434f5eb45e4c6b52877554e95dcad267 392 SUPERFAMILY SSF53067 74 380 1.35E-55 T 13-10-2018 Y11_19011 434f5eb45e4c6b52877554e95dcad267 392 Gene3D G3DSA:3.30.420.40 79 372 3.9E-90 T 13-10-2018 Y11_19011 434f5eb45e4c6b52877554e95dcad267 392 Gene3D G3DSA:1.10.10.10 1 67 1.8E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_19011 434f5eb45e4c6b52877554e95dcad267 392 ProSitePatterns PS01125 ROK family signature. 206 233 - T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Y11_21161 fbf31c9b1a7959ea21ea81238410992e 89 Pfam PF07338 Protein of unknown function (DUF1471) 33 89 6.3E-20 T 13-10-2018 IPR010854 Domain of unknown function DUF1471 Y11_21161 fbf31c9b1a7959ea21ea81238410992e 89 Gene3D G3DSA:3.30.1660.10 20 89 8.6E-22 T 13-10-2018 IPR025543 Dodecin-like Y11_21161 fbf31c9b1a7959ea21ea81238410992e 89 SUPERFAMILY SSF159871 2 89 5.23E-25 T 13-10-2018 IPR036275 YdgH-like superfamily Y11_02071 23be121c8400fdfdc6b14383e535c90d 164 SUPERFAMILY SSF116960 1 164 5.23E-70 T 13-10-2018 Y11_02071 23be121c8400fdfdc6b14383e535c90d 164 PIRSF PIRSF006272 1 164 1.6E-75 T 13-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU Y11_02071 23be121c8400fdfdc6b14383e535c90d 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 4.0E-94 T 13-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU Y11_02071 23be121c8400fdfdc6b14383e535c90d 164 Pfam PF03887 YfbU domain 1 164 7.0E-70 T 13-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU Y11_02071 23be121c8400fdfdc6b14383e535c90d 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 38.232 T 13-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU Y11_02071 23be121c8400fdfdc6b14383e535c90d 164 Gene3D G3DSA:1.10.287.680 1 53 5.4E-33 T 13-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily Y11_02071 23be121c8400fdfdc6b14383e535c90d 164 Gene3D G3DSA:1.10.3190.10 54 164 2.1E-40 T 13-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 ProSitePatterns PS01229 Hypothetical cof family signature 2. 802 824 - T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 PRINTS PR00943 Copper-transporting ATPase signature 393 411 1.4E-7 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 PRINTS PR00943 Copper-transporting ATPase signature 588 603 1.4E-7 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 PRINTS PR00943 Copper-transporting ATPase signature 779 796 1.4E-7 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 PRINTS PR00943 Copper-transporting ATPase signature 526 540 1.4E-7 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 PRINTS PR00943 Copper-transporting ATPase signature 321 340 1.4E-7 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 SUPERFAMILY SSF81653 406 503 3.66E-24 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 SUPERFAMILY SSF55008 1 67 5.76E-12 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 Pfam PF00702 haloacid dehalogenase-like hydrolase 602 816 2.6E-49 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 317 911 1.6E-185 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 Gene3D G3DSA:3.40.1110.10 616 734 2.5E-92 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 Gene3D G3DSA:2.70.150.20 396 508 1.2E-32 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 SUPERFAMILY SSF81665 370 869 1.57E-10 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 Gene3D G3DSA:3.40.50.1000 586 854 2.5E-92 T 13-10-2018 IPR023214 HAD superfamily Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 SUPERFAMILY SSF56784 603 908 1.33E-60 T 13-10-2018 IPR036412 HAD-like superfamily Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 607 613 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 727 738 6.8E-25 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 802 821 6.8E-25 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 825 837 6.8E-25 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 605 619 6.8E-25 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 749 759 6.8E-25 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 453 467 6.8E-25 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 375 880 1.9E-84 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 SUPERFAMILY SSF55008 71 133 9.56E-13 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 Pfam PF00122 E1-E2 ATPase 404 584 1.5E-49 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 Gene3D G3DSA:3.30.70.100 71 131 4.9E-14 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 Gene3D G3DSA:3.30.70.100 185 248 9.1E-19 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 Gene3D G3DSA:3.30.70.100 6 64 1.4E-11 T 13-10-2018 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 ProSitePatterns PS01047 Heavy-metal-associated domain. 189 218 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 336 911 3.5E-179 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 Pfam PF00403 Heavy-metal-associated domain 7 62 3.3E-8 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 Pfam PF00403 Heavy-metal-associated domain 191 243 1.7E-12 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 Pfam PF00403 Heavy-metal-associated domain 73 128 2.8E-8 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Y11_19811 d68be98293df9aa8caccb4f28ccc0b61 918 SUPERFAMILY SSF55008 184 250 1.7E-17 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Y11_29261 ad05bd934b87b4254e7c9a9dbb02aa4c 228 SMART SM00421 148 205 1.9E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_29261 ad05bd934b87b4254e7c9a9dbb02aa4c 228 Gene3D G3DSA:3.30.450.20 10 125 2.1E-5 T 13-10-2018 Y11_29261 ad05bd934b87b4254e7c9a9dbb02aa4c 228 SUPERFAMILY SSF46894 141 210 8.16E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_29261 ad05bd934b87b4254e7c9a9dbb02aa4c 228 Pfam PF08448 PAS fold 16 126 1.4E-6 T 13-10-2018 IPR013656 PAS fold-4 Y11_29261 ad05bd934b87b4254e7c9a9dbb02aa4c 228 SUPERFAMILY SSF55785 5 123 8.19E-5 T 13-10-2018 IPR035965 PAS domain superfamily Y11_29261 ad05bd934b87b4254e7c9a9dbb02aa4c 228 Gene3D G3DSA:1.10.10.10 145 211 3.3E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_29261 ad05bd934b87b4254e7c9a9dbb02aa4c 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 3.0E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_38881 944ebafbd11b162b3e8fba50e31f71f0 318 Pfam PF03466 LysR substrate binding domain 118 312 8.8E-20 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_38881 944ebafbd11b162b3e8fba50e31f71f0 318 Gene3D G3DSA:3.40.190.10 108 310 6.3E-37 T 13-10-2018 Y11_38881 944ebafbd11b162b3e8fba50e31f71f0 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 86 3.2E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_38881 944ebafbd11b162b3e8fba50e31f71f0 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 63 74 4.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_38881 944ebafbd11b162b3e8fba50e31f71f0 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_38881 944ebafbd11b162b3e8fba50e31f71f0 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 63 4.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_38881 944ebafbd11b162b3e8fba50e31f71f0 318 Gene3D G3DSA:3.40.190.10 189 286 6.3E-37 T 13-10-2018 Y11_38881 944ebafbd11b162b3e8fba50e31f71f0 318 Gene3D G3DSA:1.10.10.10 18 105 2.1E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_38881 944ebafbd11b162b3e8fba50e31f71f0 318 SUPERFAMILY SSF46785 22 101 9.07E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_38881 944ebafbd11b162b3e8fba50e31f71f0 318 SUPERFAMILY SSF53850 108 313 9.59E-42 T 13-10-2018 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 Gene3D G3DSA:1.20.120.160 656 778 2.0E-32 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 SMART SM00091 155 221 4.9E-8 T 13-10-2018 IPR000014 PAS domain Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 PIRSF PIRSF003182 1 778 0.0 T 13-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 SUPERFAMILY SSF47226 661 774 1.16E-31 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 SUPERFAMILY SSF52172 525 659 1.71E-30 T 13-10-2018 IPR011006 CheY-like superfamily Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 505 3.2E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 SMART SM00073 675 772 8.2E-19 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 Gene3D G3DSA:1.10.287.130 267 345 2.5E-21 T 13-10-2018 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 Pfam PF00072 Response regulator receiver domain 527 638 8.3E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 SUPERFAMILY SSF47384 269 347 9.61E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 SMART SM00387 394 507 2.4E-36 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 Gene3D G3DSA:3.30.450.20 152 266 1.8E-19 T 13-10-2018 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 Pfam PF00989 PAS fold 157 266 2.6E-17 T 13-10-2018 IPR013767 PAS fold GO:0006355 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 SUPERFAMILY SSF55874 336 505 1.17E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 276 1.0E-15 T 13-10-2018 IPR000014 PAS domain Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 6.3E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 Gene3D G3DSA:3.40.50.2300 509 647 2.2E-33 T 13-10-2018 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 Gene3D G3DSA:1.10.287.970 1 89 5.9E-37 T 13-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 SUPERFAMILY SSF55785 143 267 1.92E-21 T 13-10-2018 IPR035965 PAS domain superfamily Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 Gene3D G3DSA:3.30.565.10 348 508 1.1E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 4.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 4.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 4.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 4.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 SMART SM00388 282 347 4.8E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 SMART SM00448 525 638 1.8E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_26231 2a7d5457f65d51ea61beaef62fc3dbcc 778 Pfam PF01627 Hpt domain 686 763 4.1E-14 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Y11_34131 d2965de5ec6aa288dc76a7b6d6a3b2be 424 Gene3D G3DSA:3.50.50.60 1 66 3.0E-6 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_34131 d2965de5ec6aa288dc76a7b6d6a3b2be 424 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 420 51.204 T 13-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 Y11_34131 d2965de5ec6aa288dc76a7b6d6a3b2be 424 SUPERFAMILY SSF51905 1 419 1.73E-25 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_34131 d2965de5ec6aa288dc76a7b6d6a3b2be 424 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 417 3.2E-180 T 13-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 Y11_34131 d2965de5ec6aa288dc76a7b6d6a3b2be 424 PIRSF PIRSF000141 1 423 2.2E-173 T 13-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 Y11_34131 d2965de5ec6aa288dc76a7b6d6a3b2be 424 Pfam PF00890 FAD binding domain 4 404 6.3E-62 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_41831 04f4795073d4f908b147026a061be6ff 164 Hamap MF_01954 Urease subunit beta [ureB]. 35 135 29.237 T 13-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41831 04f4795073d4f908b147026a061be6ff 164 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 38 133 5.8E-40 T 13-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41831 04f4795073d4f908b147026a061be6ff 164 Gene3D G3DSA:2.10.150.10 34 147 1.5E-49 T 13-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41831 04f4795073d4f908b147026a061be6ff 164 Pfam PF00699 Urease beta subunit 39 133 2.6E-40 T 13-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41831 04f4795073d4f908b147026a061be6ff 164 SUPERFAMILY SSF51278 38 139 1.7E-42 T 13-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_08271 5fc4d3c189ca735b97fcc1b7359b5297 217 SUPERFAMILY SSF63380 1 93 3.66E-28 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Y11_08271 5fc4d3c189ca735b97fcc1b7359b5297 217 Gene3D G3DSA:2.40.30.20 94 191 1.3E-28 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_08271 5fc4d3c189ca735b97fcc1b7359b5297 217 SUPERFAMILY SSF63380 93 199 6.63E-32 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Y11_08271 5fc4d3c189ca735b97fcc1b7359b5297 217 Pfam PF00677 Lumazine binding domain 100 185 3.0E-21 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Y11_08271 5fc4d3c189ca735b97fcc1b7359b5297 217 Pfam PF00677 Lumazine binding domain 3 87 5.0E-21 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Y11_08271 5fc4d3c189ca735b97fcc1b7359b5297 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 3.8E-84 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Y11_08271 5fc4d3c189ca735b97fcc1b7359b5297 217 Gene3D G3DSA:2.40.30.20 1 89 1.6E-32 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_08271 5fc4d3c189ca735b97fcc1b7359b5297 217 PIRSF PIRSF000498 1 212 8.1E-74 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Y11_34701 680c8bc4de2d3bdb0a8e1a1c063edb6f 340 Gene3D G3DSA:3.20.20.70 3 337 9.7E-146 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_34701 680c8bc4de2d3bdb0a8e1a1c063edb6f 340 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 13-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Y11_34701 680c8bc4de2d3bdb0a8e1a1c063edb6f 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 8.2E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Y11_34701 680c8bc4de2d3bdb0a8e1a1c063edb6f 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 8.2E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Y11_34701 680c8bc4de2d3bdb0a8e1a1c063edb6f 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 8.2E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Y11_34701 680c8bc4de2d3bdb0a8e1a1c063edb6f 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 8.2E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Y11_34701 680c8bc4de2d3bdb0a8e1a1c063edb6f 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 8.2E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Y11_34701 680c8bc4de2d3bdb0a8e1a1c063edb6f 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 8.2E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Y11_34701 680c8bc4de2d3bdb0a8e1a1c063edb6f 340 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 3.7E-139 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Y11_34701 680c8bc4de2d3bdb0a8e1a1c063edb6f 340 SMART SM01004 9 333 6.0E-239 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Y11_34701 680c8bc4de2d3bdb0a8e1a1c063edb6f 340 SUPERFAMILY SSF51569 7 335 2.34E-143 T 13-10-2018 Y11_34701 680c8bc4de2d3bdb0a8e1a1c063edb6f 340 PIRSF PIRSF001415 2 336 1.7E-152 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Y11_26531 65b26e51c57250547c0ae110e53bef17 283 PIRSF PIRSF005052 1 283 1.1E-114 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 Y11_26531 65b26e51c57250547c0ae110e53bef17 283 SUPERFAMILY SSF52540 2 151 1.68E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_26531 65b26e51c57250547c0ae110e53bef17 283 Pfam PF03668 P-loop ATPase protein family 1 282 2.3E-144 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 Y11_26531 65b26e51c57250547c0ae110e53bef17 283 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 40.967 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 Y11_13621 f159faa46dc85ea42a78be2a0aa8714a 244 SUPERFAMILY SSF53335 6 234 3.68E-40 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_13621 f159faa46dc85ea42a78be2a0aa8714a 244 Pfam PF08241 Methyltransferase domain 47 141 1.1E-17 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Y11_13621 f159faa46dc85ea42a78be2a0aa8714a 244 Gene3D G3DSA:3.40.50.150 24 242 7.3E-63 T 13-10-2018 Y11_13031 972a8838de0db62ce9eb7f89a9d9ed63 241 Pfam PF01695 IstB-like ATP binding protein 54 228 5.1E-54 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Y11_13031 972a8838de0db62ce9eb7f89a9d9ed63 241 Gene3D G3DSA:3.40.50.300 61 241 2.2E-40 T 13-10-2018 Y11_13031 972a8838de0db62ce9eb7f89a9d9ed63 241 PIRSF PIRSF003073 1 241 1.5E-70 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Y11_13031 972a8838de0db62ce9eb7f89a9d9ed63 241 SUPERFAMILY SSF52540 64 228 2.59E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_13031 972a8838de0db62ce9eb7f89a9d9ed63 241 SMART SM00382 97 229 6.7E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_30351 7cb5276587d07e614e1fe8768585ce37 640 Pfam PF02378 Phosphotransferase system, EIIC 18 278 3.2E-19 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Y11_30351 7cb5276587d07e614e1fe8768585ce37 640 Gene3D G3DSA:3.40.930.10 493 640 1.2E-54 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Y11_30351 7cb5276587d07e614e1fe8768585ce37 640 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 5.9E-183 T 13-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 Y11_30351 7cb5276587d07e614e1fe8768585ce37 640 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 501 636 3.4E-34 T 13-10-2018 IPR002178 PTS EIIA type-2 domain Y11_30351 7cb5276587d07e614e1fe8768585ce37 640 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 542 558 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain Y11_30351 7cb5276587d07e614e1fe8768585ce37 640 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 382 457 3.1E-9 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Y11_30351 7cb5276587d07e614e1fe8768585ce37 640 Gene3D G3DSA:3.40.50.2300 368 473 1.5E-35 T 13-10-2018 Y11_30351 7cb5276587d07e614e1fe8768585ce37 640 SUPERFAMILY SSF55804 499 637 1.83E-41 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Y11_30351 7cb5276587d07e614e1fe8768585ce37 640 SUPERFAMILY SSF52794 380 470 6.28E-22 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Y11_38381 a839ed523369ce870c08c85a9cfe872c 455 Pfam PF07690 Major Facilitator Superfamily 77 403 5.3E-27 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_38381 a839ed523369ce870c08c85a9cfe872c 455 Gene3D G3DSA:1.20.1250.20 31 444 8.6E-58 T 13-10-2018 Y11_38381 a839ed523369ce870c08c85a9cfe872c 455 SUPERFAMILY SSF103473 5 436 1.83E-62 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_23861 aa3b06da9463c0eaaf45478890d7b5a8 490 Pfam PF00083 Sugar (and other) transporter 19 439 3.0E-65 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Y11_23861 aa3b06da9463c0eaaf45478890d7b5a8 490 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 24 423 1.6E-142 T 13-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 Y11_23861 aa3b06da9463c0eaaf45478890d7b5a8 490 Gene3D G3DSA:1.20.1250.20 15 451 7.3E-73 T 13-10-2018 Y11_23861 aa3b06da9463c0eaaf45478890d7b5a8 490 SUPERFAMILY SSF103661 456 488 3.53E-11 T 13-10-2018 IPR036292 Proline/betaine transporter ProP, C-terminal Y11_23861 aa3b06da9463c0eaaf45478890d7b5a8 490 SUPERFAMILY SSF103473 15 435 1.44E-70 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_23861 aa3b06da9463c0eaaf45478890d7b5a8 490 Pfam PF08946 Osmosensory transporter coiled coil 445 490 7.7E-21 T 13-10-2018 IPR015041 Osmosensory transporter coiled coil Y11_23861 aa3b06da9463c0eaaf45478890d7b5a8 490 ProSitePatterns PS00216 Sugar transport proteins signature 1. 306 323 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Y11_06441 30b18a458ab88badaf88d22f840016d8 684 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 412 9.3E-97 T 13-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 Y11_06441 30b18a458ab88badaf88d22f840016d8 684 Gene3D G3DSA:3.40.50.1820 23 680 2.1E-249 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_06441 30b18a458ab88badaf88d22f840016d8 684 Gene3D G3DSA:2.130.10.120 74 413 2.1E-249 T 13-10-2018 Y11_06441 30b18a458ab88badaf88d22f840016d8 684 SUPERFAMILY SSF50993 2 414 1.2E-85 T 13-10-2018 Y11_06441 30b18a458ab88badaf88d22f840016d8 684 SUPERFAMILY SSF53474 422 663 2.25E-47 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_06441 30b18a458ab88badaf88d22f840016d8 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 614 636 5.7E-55 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Y11_06441 30b18a458ab88badaf88d22f840016d8 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 596 611 5.7E-55 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Y11_06441 30b18a458ab88badaf88d22f840016d8 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 508 527 5.7E-55 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Y11_06441 30b18a458ab88badaf88d22f840016d8 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 480 504 5.7E-55 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Y11_06441 30b18a458ab88badaf88d22f840016d8 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 454 472 5.7E-55 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Y11_06441 30b18a458ab88badaf88d22f840016d8 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 538 558 5.7E-55 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Y11_06441 30b18a458ab88badaf88d22f840016d8 684 Pfam PF00326 Prolyl oligopeptidase family 469 682 2.1E-70 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Y11_11841 429cb929e67b232aede523e1e0762e98 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.956 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Y11_11841 429cb929e67b232aede523e1e0762e98 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 6.6E-42 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Y11_11841 429cb929e67b232aede523e1e0762e98 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 6.6E-42 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Y11_11841 429cb929e67b232aede523e1e0762e98 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 6.6E-42 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Y11_11841 429cb929e67b232aede523e1e0762e98 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 6.6E-42 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Y11_11841 429cb929e67b232aede523e1e0762e98 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 6.6E-42 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Y11_11841 429cb929e67b232aede523e1e0762e98 173 SUPERFAMILY SSF53098 3 156 1.78E-55 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_11841 429cb929e67b232aede523e1e0762e98 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 13-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 Y11_11841 429cb929e67b232aede523e1e0762e98 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 3.4E-65 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Y11_11841 429cb929e67b232aede523e1e0762e98 173 Gene3D G3DSA:3.30.420.10 2 159 3.7E-54 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_11841 429cb929e67b232aede523e1e0762e98 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 158 9.0E-82 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Y11_32041 75ead49731a313374a9a2a023f058fad 82 Gene3D G3DSA:1.10.10.10 1 80 4.1E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_32041 75ead49731a313374a9a2a023f058fad 82 Hamap MF_01586 Probable [Fe-S]-dependent transcriptional repressor [feoC]. 1 79 26.119 T 13-10-2018 IPR023732 Probable [Fe-S]-dependent transcriptional repressor Y11_32041 75ead49731a313374a9a2a023f058fad 82 Pfam PF09012 FeoC like transcriptional regulator 3 77 8.1E-22 T 13-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC Y11_32041 75ead49731a313374a9a2a023f058fad 82 SUPERFAMILY SSF46785 2 75 5.23E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_17591 e26e33b92f30b1f8cee70e627efc3bff 482 Gene3D G3DSA:1.10.1370.10 36 114 2.0E-9 T 13-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Y11_17591 e26e33b92f30b1f8cee70e627efc3bff 482 Gene3D G3DSA:1.10.1370.40 115 136 2.0E-9 T 13-10-2018 Y11_17591 e26e33b92f30b1f8cee70e627efc3bff 482 Gene3D G3DSA:3.40.390.10 148 245 5.3E-19 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Y11_17591 e26e33b92f30b1f8cee70e627efc3bff 482 Pfam PF01432 Peptidase family M3 33 411 4.2E-20 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Y11_17591 e26e33b92f30b1f8cee70e627efc3bff 482 SUPERFAMILY SSF55486 10 414 5.01E-67 T 13-10-2018 Y11_17591 e26e33b92f30b1f8cee70e627efc3bff 482 Gene3D G3DSA:1.10.1370.10 246 409 5.3E-19 T 13-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Y11_42431 8363c7aff06c2376443f14bf0471a20e 295 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 295 4.2E-126 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 Y11_42431 8363c7aff06c2376443f14bf0471a20e 295 Pfam PF01380 SIS domain 129 208 3.3E-8 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_42431 8363c7aff06c2376443f14bf0471a20e 295 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 13-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 Y11_42431 8363c7aff06c2376443f14bf0471a20e 295 Gene3D G3DSA:1.10.8.1080 219 295 8.1E-30 T 13-10-2018 Y11_42431 8363c7aff06c2376443f14bf0471a20e 295 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 43.424 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 Y11_42431 8363c7aff06c2376443f14bf0471a20e 295 SUPERFAMILY SSF53697 4 248 1.74E-73 T 13-10-2018 Y11_42431 8363c7aff06c2376443f14bf0471a20e 295 Gene3D G3DSA:3.40.50.10490 1 218 5.5E-85 T 13-10-2018 Y11_25051 6e0572b5e60157f94a6274b307cbedeb 217 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.742 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Y11_25051 6e0572b5e60157f94a6274b307cbedeb 217 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 1.9E-51 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Y11_25051 6e0572b5e60157f94a6274b307cbedeb 217 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 5.6E-82 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Y11_25051 6e0572b5e60157f94a6274b307cbedeb 217 SMART SM01207 10 185 6.1E-86 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Y11_40471 7670d77050bd7a4e0b934c933382004e 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 44 112 3.0E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_40471 7670d77050bd7a4e0b934c933382004e 236 SMART SM00862 39 112 4.0E-14 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_40471 7670d77050bd7a4e0b934c933382004e 236 Gene3D G3DSA:1.10.10.10 17 128 2.9E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_40471 7670d77050bd7a4e0b934c933382004e 236 SUPERFAMILY SSF46894 20 112 3.97E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.3E-131 T 13-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 SMART SM00322 301 358 0.19 T 13-10-2018 IPR004087 K Homology domain GO:0003676 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 SMART SM00322 230 293 17.0 T 13-10-2018 IPR004087 K Homology domain GO:0003676 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 Gene3D G3DSA:2.40.50.140 135 198 4.8E-20 T 13-10-2018 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 SMART SM00316 133 200 3.9E-9 T 13-10-2018 IPR022967 RNA-binding domain, S1 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 Gene3D G3DSA:3.30.1480.10 1 129 9.1E-47 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 441 489 4.2E-18 T 13-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 5.9E-21 T 13-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 SUPERFAMILY SSF54814 201 278 2.68E-29 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 SUPERFAMILY SSF54814 279 342 6.54E-15 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 SUPERFAMILY SSF50249 133 199 2.11E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 SUPERFAMILY SSF47794 429 492 1.88E-17 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 Pfam PF13184 NusA-like KH domain 230 297 8.1E-28 T 13-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 Gene3D G3DSA:1.10.150.20 431 490 2.2E-25 T 13-10-2018 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 Gene3D G3DSA:3.30.300.20 278 346 1.1E-23 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 1.7E-9 T 13-10-2018 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.413 T 13-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 SUPERFAMILY SSF69705 1 126 2.62E-42 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 Gene3D G3DSA:1.10.150.20 352 421 3.0E-31 T 13-10-2018 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 Gene3D G3DSA:3.30.300.20 199 277 5.1E-31 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 SUPERFAMILY SSF47794 355 415 1.52E-16 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Y11_36701 7f651ae64bae80d437ed08cb9708e7eb 495 Pfam PF08529 NusA N-terminal domain 4 123 3.0E-37 T 13-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Y11_36401 94ff8eda14d0a40cfce3b3f740733afb 213 Gene3D G3DSA:3.30.1060.10 6 213 1.5E-85 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Y11_36401 94ff8eda14d0a40cfce3b3f740733afb 213 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 44 206 37.838 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Y11_36401 94ff8eda14d0a40cfce3b3f740733afb 213 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 200 2.2E-65 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Y11_36401 94ff8eda14d0a40cfce3b3f740733afb 213 Pfam PF01625 Peptide methionine sulfoxide reductase 47 200 1.4E-63 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Y11_36401 94ff8eda14d0a40cfce3b3f740733afb 213 SUPERFAMILY SSF55068 7 209 2.62E-81 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Y11_24001 522faf72ffd8afe12df1966ef6b78780 172 Gene3D G3DSA:3.30.1460.40 1 143 6.7E-44 T 13-10-2018 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily Y11_24001 522faf72ffd8afe12df1966ef6b78780 172 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 16 161 9.2E-52 T 13-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE Y11_24001 522faf72ffd8afe12df1966ef6b78780 172 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 16 161 7.0E-38 T 13-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE Y11_24001 522faf72ffd8afe12df1966ef6b78780 172 Pfam PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE 12 162 8.9E-44 T 13-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE Y11_12261 27a2b99e1a8878015d4946cdb9b8aaa8 345 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 336 6.3E-141 T 13-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 Y11_12261 27a2b99e1a8878015d4946cdb9b8aaa8 345 SUPERFAMILY SSF55729 1 338 1.13E-130 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_12261 27a2b99e1a8878015d4946cdb9b8aaa8 345 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 344 72.163 T 13-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 Y11_12261 27a2b99e1a8878015d4946cdb9b8aaa8 345 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 4 338 3.9E-145 T 13-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 Y11_12261 27a2b99e1a8878015d4946cdb9b8aaa8 345 Gene3D G3DSA:2.40.40.20 275 339 4.2E-8 T 13-10-2018 Y11_12261 27a2b99e1a8878015d4946cdb9b8aaa8 345 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 4 338 3.3E-155 T 13-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 Y11_12261 27a2b99e1a8878015d4946cdb9b8aaa8 345 Gene3D G3DSA:3.40.630.30 1 272 4.1E-120 T 13-10-2018 Y11_00891 ee46038ec5a7a7daddc53e1d56ea7f22 553 SUPERFAMILY SSF52518 356 544 6.08E-50 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_00891 ee46038ec5a7a7daddc53e1d56ea7f22 553 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 384 528 3.6E-20 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Y11_00891 ee46038ec5a7a7daddc53e1d56ea7f22 553 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 330 1.1E-21 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Y11_00891 ee46038ec5a7a7daddc53e1d56ea7f22 553 SUPERFAMILY SSF52518 5 176 4.12E-42 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_00891 ee46038ec5a7a7daddc53e1d56ea7f22 553 Gene3D G3DSA:3.40.50.970 1 184 1.2E-74 T 13-10-2018 Y11_00891 ee46038ec5a7a7daddc53e1d56ea7f22 553 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 178 5.0E-34 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Y11_00891 ee46038ec5a7a7daddc53e1d56ea7f22 553 PIRSF PIRSF036565 1 552 3.2E-206 T 13-10-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 Y11_00891 ee46038ec5a7a7daddc53e1d56ea7f22 553 Gene3D G3DSA:3.40.50.970 356 544 1.0E-63 T 13-10-2018 Y11_00891 ee46038ec5a7a7daddc53e1d56ea7f22 553 SUPERFAMILY SSF52467 167 335 2.45E-31 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Y11_00891 ee46038ec5a7a7daddc53e1d56ea7f22 553 Gene3D G3DSA:3.40.50.1220 190 347 1.1E-44 T 13-10-2018 Y11_16911 2f9f918f8055795e4da0cf8b47a737b1 417 SUPERFAMILY SSF51004 16 318 1.33E-8 T 13-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily Y11_16911 2f9f918f8055795e4da0cf8b47a737b1 417 Pfam PF08309 LVIVD repeat 221 250 0.026 T 13-10-2018 IPR013211 LVIVD Y11_19801 e0b14e1be36c234b284a1dc9e54e9611 139 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 5.6E-58 T 13-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 Y11_19801 e0b14e1be36c234b284a1dc9e54e9611 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.7E-5 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Y11_19801 e0b14e1be36c234b284a1dc9e54e9611 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.7E-5 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Y11_19801 e0b14e1be36c234b284a1dc9e54e9611 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.7E-5 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Y11_19801 e0b14e1be36c234b284a1dc9e54e9611 139 SUPERFAMILY SSF46955 1 126 2.12E-35 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Y11_19801 e0b14e1be36c234b284a1dc9e54e9611 139 SMART SM00422 1 70 3.8E-29 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Y11_19801 e0b14e1be36c234b284a1dc9e54e9611 139 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.2E-19 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Y11_19801 e0b14e1be36c234b284a1dc9e54e9611 139 Gene3D G3DSA:1.10.1660.10 1 125 1.8E-32 T 13-10-2018 Y11_21871 43dbef86d0cca579bc6dcaeeed98fe83 880 SUPERFAMILY SSF52210 125 286 1.14E-36 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Y11_21871 43dbef86d0cca579bc6dcaeeed98fe83 880 SUPERFAMILY SSF51735 2 136 2.36E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_21871 43dbef86d0cca579bc6dcaeeed98fe83 880 SUPERFAMILY SSF56059 481 692 1.55E-25 T 13-10-2018 Y11_21871 43dbef86d0cca579bc6dcaeeed98fe83 880 SMART SM00881 9 104 6.9E-23 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Y11_21871 43dbef86d0cca579bc6dcaeeed98fe83 880 Gene3D G3DSA:3.40.50.261 285 455 1.2E-44 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Y11_21871 43dbef86d0cca579bc6dcaeeed98fe83 880 Pfam PF00583 Acetyltransferase (GNAT) family 761 863 3.7E-11 T 13-10-2018 IPR000182 GNAT domain Y11_21871 43dbef86d0cca579bc6dcaeeed98fe83 880 Gene3D G3DSA:3.40.630.30 716 880 1.7E-40 T 13-10-2018 Y11_21871 43dbef86d0cca579bc6dcaeeed98fe83 880 Gene3D G3DSA:3.40.50.720 2 130 4.4E-30 T 13-10-2018 Y11_21871 43dbef86d0cca579bc6dcaeeed98fe83 880 Pfam PF13380 CoA binding domain 13 129 1.4E-20 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Y11_21871 43dbef86d0cca579bc6dcaeeed98fe83 880 SUPERFAMILY SSF52210 287 447 9.16E-39 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Y11_21871 43dbef86d0cca579bc6dcaeeed98fe83 880 Gene3D G3DSA:3.30.470.20 479 690 3.5E-56 T 13-10-2018 Y11_21871 43dbef86d0cca579bc6dcaeeed98fe83 880 Gene3D G3DSA:3.30.1490.20 499 576 3.5E-56 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Y11_21871 43dbef86d0cca579bc6dcaeeed98fe83 880 Gene3D G3DSA:3.40.50.261 131 283 2.7E-47 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Y11_21871 43dbef86d0cca579bc6dcaeeed98fe83 880 SUPERFAMILY SSF55729 617 866 1.7E-20 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_21871 43dbef86d0cca579bc6dcaeeed98fe83 880 Pfam PF13549 ATP-grasp domain 472 694 2.0E-73 T 13-10-2018 Y11_21871 43dbef86d0cca579bc6dcaeeed98fe83 880 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 7.1E-45 T 13-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Y11_04441 3140680aea0db50d37049beae4366969 371 SUPERFAMILY SSF56935 23 371 5.95E-83 T 13-10-2018 Y11_04441 3140680aea0db50d37049beae4366969 371 Gene3D G3DSA:2.40.160.10 23 371 3.1E-152 T 13-10-2018 IPR023614 Porin domain superfamily Y11_04441 3140680aea0db50d37049beae4366969 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 52 70 5.2E-70 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_04441 3140680aea0db50d37049beae4366969 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 97 119 5.2E-70 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_04441 3140680aea0db50d37049beae4366969 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 152 174 5.2E-70 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_04441 3140680aea0db50d37049beae4366969 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 278 297 5.2E-70 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_04441 3140680aea0db50d37049beae4366969 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 247 264 5.2E-70 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_04441 3140680aea0db50d37049beae4366969 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 5.2E-70 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_04441 3140680aea0db50d37049beae4366969 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 97 107 3.9E-16 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_04441 3140680aea0db50d37049beae4366969 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 241 253 3.9E-16 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_04441 3140680aea0db50d37049beae4366969 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 323 340 3.9E-16 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_04441 3140680aea0db50d37049beae4366969 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 154 165 3.9E-16 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_04441 3140680aea0db50d37049beae4366969 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 53 64 3.9E-16 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_04441 3140680aea0db50d37049beae4366969 371 Pfam PF00267 Gram-negative porin 28 371 2.4E-146 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_04441 3140680aea0db50d37049beae4366969 371 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 323 339 - T 13-10-2018 IPR013793 Porin, Gram-negative type, conserved site Y11_40811 8bf9bd0ad2b4324911a0e916eec297b6 390 Gene3D G3DSA:2.40.40.10 54 355 1.6E-154 T 13-10-2018 IPR036908 RlpA-like domain superfamily Y11_40811 8bf9bd0ad2b4324911a0e916eec297b6 390 PIRSF PIRSF019422 1 367 9.0E-87 T 13-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A Y11_40811 8bf9bd0ad2b4324911a0e916eec297b6 390 Pfam PF06725 3D domain 279 356 2.4E-25 T 13-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 Y11_40811 8bf9bd0ad2b4324911a0e916eec297b6 390 Pfam PF03562 MltA specific insert domain 103 259 1.3E-41 T 13-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 Y11_40811 8bf9bd0ad2b4324911a0e916eec297b6 390 SMART SM00925 125 259 6.3E-73 T 13-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 Y11_40811 8bf9bd0ad2b4324911a0e916eec297b6 390 SUPERFAMILY SSF50685 25 355 4.53E-110 T 13-10-2018 IPR036908 RlpA-like domain superfamily Y11_40811 8bf9bd0ad2b4324911a0e916eec297b6 390 Gene3D G3DSA:2.40.240.50 125 264 1.6E-154 T 13-10-2018 Y11_32081 3dfbd968a1f33912d5b89327673cd097 794 Gene3D G3DSA:3.30.420.140 325 450 9.0E-151 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Y11_32081 3dfbd968a1f33912d5b89327673cd097 794 Pfam PF12836 Helix-hairpin-helix motif 490 554 3.5E-28 T 13-10-2018 Y11_32081 3dfbd968a1f33912d5b89327673cd097 794 Pfam PF09371 Tex-like protein N-terminal domain 9 193 2.0E-68 T 13-10-2018 IPR018974 Tex-like protein, N-terminal Y11_32081 3dfbd968a1f33912d5b89327673cd097 794 Gene3D G3DSA:2.40.50.140 630 723 3.5E-29 T 13-10-2018 Y11_32081 3dfbd968a1f33912d5b89327673cd097 794 SUPERFAMILY SSF158832 2 321 2.48E-118 T 13-10-2018 Y11_32081 3dfbd968a1f33912d5b89327673cd097 794 Gene3D G3DSA:1.10.150.310 498 629 3.5E-50 T 13-10-2018 Y11_32081 3dfbd968a1f33912d5b89327673cd097 794 SMART SM00316 648 719 6.4E-26 T 13-10-2018 IPR022967 RNA-binding domain, S1 Y11_32081 3dfbd968a1f33912d5b89327673cd097 794 SUPERFAMILY SSF50249 637 721 4.77E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_32081 3dfbd968a1f33912d5b89327673cd097 794 SMART SM00732 326 423 4.4E-35 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Y11_32081 3dfbd968a1f33912d5b89327673cd097 794 SUPERFAMILY SSF53098 322 468 6.07E-49 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_32081 3dfbd968a1f33912d5b89327673cd097 794 SUPERFAMILY SSF47781 559 631 1.09E-19 T 13-10-2018 IPR010994 RuvA domain 2-like Y11_32081 3dfbd968a1f33912d5b89327673cd097 794 Pfam PF00575 S1 RNA binding domain 649 719 1.3E-22 T 13-10-2018 IPR003029 S1 domain GO:0003676 Y11_32081 3dfbd968a1f33912d5b89327673cd097 794 SUPERFAMILY SSF47781 469 557 1.89E-28 T 13-10-2018 IPR010994 RuvA domain 2-like Y11_32081 3dfbd968a1f33912d5b89327673cd097 794 Gene3D G3DSA:1.10.10.650 1 109 1.4E-39 T 13-10-2018 IPR023319 Tex-like protein, HTH domain superfamily Y11_32081 3dfbd968a1f33912d5b89327673cd097 794 Pfam PF16921 Tex protein YqgF-like domain 327 450 7.7E-49 T 13-10-2018 IPR032639 Tex protein, YqgF-like domain Y11_32081 3dfbd968a1f33912d5b89327673cd097 794 Gene3D G3DSA:1.10.3500.10 112 497 9.0E-151 T 13-10-2018 IPR023323 Tex-like domain superfamily Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 SMART SM00228 352 449 1.2E-10 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 SMART SM00228 269 351 1.0E-13 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 455 7.9E-160 T 13-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 Gene3D G3DSA:2.30.42.10 267 367 7.3E-29 T 13-10-2018 Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 Gene3D G3DSA:2.30.42.10 368 457 1.7E-25 T 13-10-2018 Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 SUPERFAMILY SSF50156 227 352 9.86E-24 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 PRINTS PR00834 HtrA/DegQ protease family signature 125 145 3.5E-58 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 3.5E-58 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 PRINTS PR00834 HtrA/DegQ protease family signature 166 190 3.5E-58 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 PRINTS PR00834 HtrA/DegQ protease family signature 104 116 3.5E-58 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 PRINTS PR00834 HtrA/DegQ protease family signature 201 218 3.5E-58 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 PRINTS PR00834 HtrA/DegQ protease family signature 309 321 3.5E-58 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 Pfam PF13180 PDZ domain 271 360 1.1E-15 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 SUPERFAMILY SSF50494 40 265 7.08E-65 T 13-10-2018 IPR009003 Peptidase S1, PA clan Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 Pfam PF13365 Trypsin-like peptidase domain 94 230 7.3E-33 T 13-10-2018 Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 376 445 1.7E-11 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 SUPERFAMILY SSF50156 382 456 1.31E-15 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Y11_26351 c93c8b841bc9223c3f8dcb201b18d222 457 Gene3D G3DSA:2.40.10.120 39 263 2.6E-86 T 13-10-2018 Y11_34261 e2920b04b1327f740abc8394330bf65c 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_34261 e2920b04b1327f740abc8394330bf65c 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 6.7E-94 T 13-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 Y11_34261 e2920b04b1327f740abc8394330bf65c 222 Pfam PF00005 ABC transporter 18 165 8.4E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_34261 e2920b04b1327f740abc8394330bf65c 222 Gene3D G3DSA:3.40.50.300 1 221 4.6E-62 T 13-10-2018 Y11_34261 e2920b04b1327f740abc8394330bf65c 222 SMART SM00382 27 214 3.0E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_34261 e2920b04b1327f740abc8394330bf65c 222 SUPERFAMILY SSF52540 1 216 2.18E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_30981 23cb4954558fa00ad271d0947cc541d3 468 Gene3D G3DSA:2.160.20.10 61 344 3.7E-66 T 13-10-2018 IPR012334 Pectin lyase fold Y11_30981 23cb4954558fa00ad271d0947cc541d3 468 SUPERFAMILY SSF51126 63 338 1.26E-40 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor Y11_30981 23cb4954558fa00ad271d0947cc541d3 468 Pfam PF05860 haemagglutination activity domain 65 185 2.8E-25 T 13-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal Y11_30981 23cb4954558fa00ad271d0947cc541d3 468 SMART SM00912 69 186 3.6E-33 T 13-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal Y11_30981 23cb4954558fa00ad271d0947cc541d3 468 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 88 181 4.7E-17 T 13-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 SUPERFAMILY SSF52009 125 246 5.23E-37 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 7.2E-23 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 9.7E-259 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 SUPERFAMILY SSF47831 23 143 1.2E-33 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.8E-29 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 4.5E-31 T 13-10-2018 Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 4.5E-31 T 13-10-2018 Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 4.5E-31 T 13-10-2018 Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 4.5E-31 T 13-10-2018 Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 541 3.2E-125 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 PIRSF PIRSF000732 1 574 3.6E-218 T 13-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 SUPERFAMILY SSF51621 252 549 5.76E-110 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 Gene3D G3DSA:3.50.30.10 4 233 5.8E-82 T 13-10-2018 Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 Gene3D G3DSA:1.10.274.10 21 146 5.8E-82 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Y11_00731 6a0cde666e1ffdba835310ff4d8cccdc 575 Gene3D G3DSA:3.20.20.60 234 575 6.9E-128 T 13-10-2018 Y11_13651 0dfee8cdf0e74984f3e5c4ca12072998 473 PIRSF PIRSF006060 5 470 2.1E-68 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_13651 0dfee8cdf0e74984f3e5c4ca12072998 473 Pfam PF00324 Amino acid permease 27 465 2.8E-115 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Y11_13651 0dfee8cdf0e74984f3e5c4ca12072998 473 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 13-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 Y11_13651 0dfee8cdf0e74984f3e5c4ca12072998 473 Gene3D G3DSA:1.20.1740.10 17 472 9.9E-61 T 13-10-2018 Y11_09911 4f46b7dd003d663107e6e2da025fbec3 294 ProSitePatterns PS00146 Beta-lactamase class-A active site. 71 86 - T 13-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 Y11_09911 4f46b7dd003d663107e6e2da025fbec3 294 Pfam PF13354 Beta-lactamase enzyme family 59 266 1.9E-42 T 13-10-2018 Y11_09911 4f46b7dd003d663107e6e2da025fbec3 294 PRINTS PR00118 Beta-lactamase class A signature 147 171 3.6E-68 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Y11_09911 4f46b7dd003d663107e6e2da025fbec3 294 PRINTS PR00118 Beta-lactamase class A signature 38 62 3.6E-68 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Y11_09911 4f46b7dd003d663107e6e2da025fbec3 294 PRINTS PR00118 Beta-lactamase class A signature 173 198 3.6E-68 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Y11_09911 4f46b7dd003d663107e6e2da025fbec3 294 PRINTS PR00118 Beta-lactamase class A signature 111 136 3.6E-68 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Y11_09911 4f46b7dd003d663107e6e2da025fbec3 294 PRINTS PR00118 Beta-lactamase class A signature 209 224 3.6E-68 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Y11_09911 4f46b7dd003d663107e6e2da025fbec3 294 PRINTS PR00118 Beta-lactamase class A signature 226 241 3.6E-68 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Y11_09911 4f46b7dd003d663107e6e2da025fbec3 294 PRINTS PR00118 Beta-lactamase class A signature 69 86 3.6E-68 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Y11_09911 4f46b7dd003d663107e6e2da025fbec3 294 Gene3D G3DSA:3.40.710.10 33 294 2.8E-79 T 13-10-2018 Y11_09911 4f46b7dd003d663107e6e2da025fbec3 294 SUPERFAMILY SSF56601 34 293 2.15E-79 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_33091 36b24613b794edc4fbba17e3f435aac6 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.2E-52 T 13-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_33091 36b24613b794edc4fbba17e3f435aac6 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 5.1E-33 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33091 36b24613b794edc4fbba17e3f435aac6 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.349 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33091 36b24613b794edc4fbba17e3f435aac6 118 PIRSF PIRSF002134 1 118 6.8E-42 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33091 36b24613b794edc4fbba17e3f435aac6 118 SUPERFAMILY SSF46946 2 114 3.68E-46 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Y11_33091 36b24613b794edc4fbba17e3f435aac6 118 Gene3D G3DSA:1.10.8.50 1 71 8.7E-28 T 13-10-2018 Y11_33091 36b24613b794edc4fbba17e3f435aac6 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 13-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33091 36b24613b794edc4fbba17e3f435aac6 118 Gene3D G3DSA:4.10.910.10 72 118 2.3E-25 T 13-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_27551 7dd251a4d3135a963b9c3226ccc2ac5e 327 SUPERFAMILY SSF51735 113 275 1.42E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_27551 7dd251a4d3135a963b9c3226ccc2ac5e 327 Pfam PF00107 Zinc-binding dehydrogenase 152 257 5.1E-30 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Y11_27551 7dd251a4d3135a963b9c3226ccc2ac5e 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 13-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Y11_27551 7dd251a4d3135a963b9c3226ccc2ac5e 327 Gene3D G3DSA:3.40.50.720 124 269 2.7E-117 T 13-10-2018 Y11_27551 7dd251a4d3135a963b9c3226ccc2ac5e 327 SMART SM00829 11 325 4.1E-27 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Y11_27551 7dd251a4d3135a963b9c3226ccc2ac5e 327 SUPERFAMILY SSF50129 2 145 4.87E-32 T 13-10-2018 IPR011032 GroES-like superfamily Y11_27551 7dd251a4d3135a963b9c3226ccc2ac5e 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 1.6E-9 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Y11_27551 7dd251a4d3135a963b9c3226ccc2ac5e 327 Gene3D G3DSA:3.90.180.10 11 321 2.7E-117 T 13-10-2018 Y11_17251 3849bf6ef948874dc8ecf02357634902 280 Gene3D G3DSA:3.40.50.1820 5 280 2.6E-91 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_17251 3849bf6ef948874dc8ecf02357634902 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 276 3.3E-118 T 13-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 Y11_17251 3849bf6ef948874dc8ecf02357634902 280 Pfam PF00756 Putative esterase 26 261 2.2E-67 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Y11_17251 3849bf6ef948874dc8ecf02357634902 280 SUPERFAMILY SSF53474 5 278 2.96E-88 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 Gene3D G3DSA:3.30.565.10 357 522 1.4E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 176 1.0E-57 T 13-10-2018 IPR019247 Histidine kinase BarA, N-terminal Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 SUPERFAMILY SSF55874 345 516 2.1E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 SMART SM00387 403 519 4.3E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 SUPERFAMILY SSF52172 531 651 3.13E-5 T 13-10-2018 IPR011006 CheY-like superfamily Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 Pfam PF00512 His Kinase A (phospho-acceptor) domain 292 355 8.4E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 SUPERFAMILY SSF158472 199 248 1.44E-5 T 13-10-2018 Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 Gene3D G3DSA:1.10.287.130 255 354 4.4E-28 T 13-10-2018 Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 Gene3D G3DSA:3.40.50.12740 668 843 5.3E-35 T 13-10-2018 Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 458 6.9E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 472 6.9E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 497 6.9E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 516 6.9E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 Pfam PF00072 Response regulator receiver domain 670 781 1.6E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 SMART SM00304 199 251 2.6E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 SMART SM00448 668 781 2.5E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 Gene3D G3DSA:1.20.1480.50 165 254 1.1E-8 T 13-10-2018 Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 SUPERFAMILY SSF47384 277 357 4.32E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 SMART SM00388 291 356 8.3E-22 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 517 6.1E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_39771 94ccab3a2956cbcfccd7c14108dabf0e 847 SUPERFAMILY SSF52172 668 788 3.84E-33 T 13-10-2018 IPR011006 CheY-like superfamily Y11_30131 de0e3fa3aaaf0214a10689c297f9ad7f 43 Gene3D G3DSA:3.40.50.1100 1 43 4.9E-9 T 13-10-2018 Y11_30131 de0e3fa3aaaf0214a10689c297f9ad7f 43 SUPERFAMILY SSF53686 1 40 1.7E-8 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y11_38791 dcacb4c89d47282450fe80841151e712 393 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 17 391 1.2E-159 T 13-10-2018 IPR004750 Sugar efflux GO:0005351|GO:0008643|GO:0016021 Y11_38791 dcacb4c89d47282450fe80841151e712 393 Pfam PF07690 Major Facilitator Superfamily 19 346 2.3E-31 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_38791 dcacb4c89d47282450fe80841151e712 393 Gene3D G3DSA:1.20.1250.20 207 392 1.5E-18 T 13-10-2018 Y11_38791 dcacb4c89d47282450fe80841151e712 393 SUPERFAMILY SSF103473 10 391 1.03E-47 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_38791 dcacb4c89d47282450fe80841151e712 393 Gene3D G3DSA:1.20.1250.20 11 200 2.4E-20 T 13-10-2018 Y11_32141 a801167d1f5e40e53f8683ff16f1f6b3 165 Hamap MF_00930 Transcription elongation factor GreB [greB]. 2 157 53.155 T 13-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 Y11_32141 a801167d1f5e40e53f8683ff16f1f6b3 165 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Y11_32141 a801167d1f5e40e53f8683ff16f1f6b3 165 Gene3D G3DSA:3.10.50.30 79 158 9.0E-33 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Y11_32141 a801167d1f5e40e53f8683ff16f1f6b3 165 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Y11_32141 a801167d1f5e40e53f8683ff16f1f6b3 165 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 1.0E-27 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Y11_32141 a801167d1f5e40e53f8683ff16f1f6b3 165 PIRSF PIRSF006092 1 158 2.6E-61 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Y11_32141 a801167d1f5e40e53f8683ff16f1f6b3 165 SUPERFAMILY SSF46557 4 79 2.49E-26 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Y11_32141 a801167d1f5e40e53f8683ff16f1f6b3 165 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 5.5E-24 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Y11_32141 a801167d1f5e40e53f8683ff16f1f6b3 165 Gene3D G3DSA:1.10.287.180 2 77 4.8E-29 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Y11_32141 a801167d1f5e40e53f8683ff16f1f6b3 165 SUPERFAMILY SSF54534 81 156 1.7E-24 T 13-10-2018 Y11_32141 a801167d1f5e40e53f8683ff16f1f6b3 165 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 4 157 8.3E-73 T 13-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 Y11_32141 a801167d1f5e40e53f8683ff16f1f6b3 165 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 155 28.65 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Y11_24841 3541f9b49d24fe578da1b1e66ec5a941 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 7.4E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_24841 3541f9b49d24fe578da1b1e66ec5a941 307 Pfam PF03466 LysR substrate binding domain 91 292 2.3E-35 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_24841 3541f9b49d24fe578da1b1e66ec5a941 307 Gene3D G3DSA:3.40.190.10 164 264 2.8E-60 T 13-10-2018 Y11_24841 3541f9b49d24fe578da1b1e66ec5a941 307 Gene3D G3DSA:1.10.10.10 1 87 1.6E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_24841 3541f9b49d24fe578da1b1e66ec5a941 307 Gene3D G3DSA:3.40.190.10 93 290 2.8E-60 T 13-10-2018 Y11_24841 3541f9b49d24fe578da1b1e66ec5a941 307 SUPERFAMILY SSF53850 91 294 3.1E-37 T 13-10-2018 Y11_24841 3541f9b49d24fe578da1b1e66ec5a941 307 SUPERFAMILY SSF46785 3 112 3.59E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_01121 bbaacc8a8fbfe386865e6ab598f1d7eb 507 Gene3D G3DSA:1.20.1250.20 248 486 1.5E-12 T 13-10-2018 Y11_01121 bbaacc8a8fbfe386865e6ab598f1d7eb 507 Gene3D G3DSA:1.20.1720.10 2 235 3.8E-34 T 13-10-2018 Y11_01121 bbaacc8a8fbfe386865e6ab598f1d7eb 507 PRINTS PR01036 Tetracycline resistance protein TetB signature 152 176 8.0E-10 T 13-10-2018 Y11_01121 bbaacc8a8fbfe386865e6ab598f1d7eb 507 PRINTS PR01036 Tetracycline resistance protein TetB signature 127 151 8.0E-10 T 13-10-2018 Y11_01121 bbaacc8a8fbfe386865e6ab598f1d7eb 507 PRINTS PR01036 Tetracycline resistance protein TetB signature 389 408 8.0E-10 T 13-10-2018 Y11_01121 bbaacc8a8fbfe386865e6ab598f1d7eb 507 PRINTS PR01036 Tetracycline resistance protein TetB signature 65 87 8.0E-10 T 13-10-2018 Y11_01121 bbaacc8a8fbfe386865e6ab598f1d7eb 507 PRINTS PR01036 Tetracycline resistance protein TetB signature 326 346 8.0E-10 T 13-10-2018 Y11_01121 bbaacc8a8fbfe386865e6ab598f1d7eb 507 Pfam PF07690 Major Facilitator Superfamily 7 398 2.1E-38 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_01121 bbaacc8a8fbfe386865e6ab598f1d7eb 507 SUPERFAMILY SSF103473 2 485 1.7E-54 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_13691 2ad046b93d870273c8b0cb5e43efa945 262 TIGRFAM TIGR03614 RutB: pyrimidine utilization protein B 34 255 8.6E-130 T 13-10-2018 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110 Y11_13691 2ad046b93d870273c8b0cb5e43efa945 262 Hamap MF_00830 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB [rutB]. 32 259 60.962 T 13-10-2018 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110 Y11_13691 2ad046b93d870273c8b0cb5e43efa945 262 Gene3D G3DSA:3.40.50.850 31 261 4.1E-55 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Y11_13691 2ad046b93d870273c8b0cb5e43efa945 262 SUPERFAMILY SSF52499 34 252 1.83E-52 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Y11_13691 2ad046b93d870273c8b0cb5e43efa945 262 Pfam PF00857 Isochorismatase family 49 246 2.7E-40 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 Y11_23161 d2333f7a25da7f7d58f9d5f37ac46eea 664 Pfam PF02780 Transketolase, C-terminal domain 545 655 2.3E-18 T 13-10-2018 IPR033248 Transketolase, C-terminal domain Y11_23161 d2333f7a25da7f7d58f9d5f37ac46eea 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Y11_23161 d2333f7a25da7f7d58f9d5f37ac46eea 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 2.6E-47 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Y11_23161 d2333f7a25da7f7d58f9d5f37ac46eea 664 Gene3D G3DSA:3.40.50.970 1 326 4.7E-136 T 13-10-2018 Y11_23161 d2333f7a25da7f7d58f9d5f37ac46eea 664 Gene3D G3DSA:3.40.50.970 327 537 2.3E-85 T 13-10-2018 Y11_23161 d2333f7a25da7f7d58f9d5f37ac46eea 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 4.2E-170 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Y11_23161 d2333f7a25da7f7d58f9d5f37ac46eea 664 SUPERFAMILY SSF52518 5 330 6.96E-121 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_23161 d2333f7a25da7f7d58f9d5f37ac46eea 664 SMART SM00861 355 525 2.6E-69 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Y11_23161 d2333f7a25da7f7d58f9d5f37ac46eea 664 Gene3D G3DSA:3.40.50.920 538 664 2.0E-43 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Y11_23161 d2333f7a25da7f7d58f9d5f37ac46eea 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 13-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 Y11_23161 d2333f7a25da7f7d58f9d5f37ac46eea 664 SUPERFAMILY SSF52922 533 664 4.71E-44 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Y11_23161 d2333f7a25da7f7d58f9d5f37ac46eea 664 SUPERFAMILY SSF52518 333 526 1.35E-69 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_23161 d2333f7a25da7f7d58f9d5f37ac46eea 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Y11_05671 afc53a8cf9e71adcf8c7a9d7d6ded680 208 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 35 206 8.6E-58 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Y11_05671 afc53a8cf9e71adcf8c7a9d7d6ded680 208 SUPERFAMILY SSF55120 29 206 2.08E-41 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_05671 afc53a8cf9e71adcf8c7a9d7d6ded680 208 Gene3D G3DSA:3.30.70.1560 95 195 2.1E-41 T 13-10-2018 Y11_05671 afc53a8cf9e71adcf8c7a9d7d6ded680 208 Gene3D G3DSA:3.30.70.580 19 94 1.7E-27 T 13-10-2018 Y11_05671 afc53a8cf9e71adcf8c7a9d7d6ded680 208 Pfam PF00849 RNA pseudouridylate synthase 60 176 7.8E-12 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_05671 afc53a8cf9e71adcf8c7a9d7d6ded680 208 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 66 80 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Y11_09571 0d50360744b53b72960b1b65f75c6359 283 SUPERFAMILY SSF52833 39 131 2.67E-18 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_09571 0d50360744b53b72960b1b65f75c6359 283 Gene3D G3DSA:1.20.1050.10 133 249 4.1E-112 T 13-10-2018 Y11_09571 0d50360744b53b72960b1b65f75c6359 283 Pfam PF02798 Glutathione S-transferase, N-terminal domain 44 126 4.5E-9 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Y11_09571 0d50360744b53b72960b1b65f75c6359 283 Gene3D G3DSA:3.40.30.10 19 255 4.1E-112 T 13-10-2018 Y11_09571 0d50360744b53b72960b1b65f75c6359 283 Pfam PF13410 Glutathione S-transferase, C-terminal domain 174 243 1.8E-9 T 13-10-2018 Y11_09571 0d50360744b53b72960b1b65f75c6359 283 SUPERFAMILY SSF47616 117 258 8.63E-34 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Y11_16451 4965a62439fd10a267ae316ce80860a4 476 SUPERFAMILY SSF53098 8 474 2.15E-135 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_16451 4965a62439fd10a267ae316ce80860a4 476 Pfam PF00929 Exonuclease 12 191 1.1E-25 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Y11_16451 4965a62439fd10a267ae316ce80860a4 476 PIRSF PIRSF000977 2 476 5.9E-204 T 13-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 Y11_16451 4965a62439fd10a267ae316ce80860a4 476 Pfam PF08411 Exonuclease C-terminal 211 472 1.8E-108 T 13-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 Y11_16451 4965a62439fd10a267ae316ce80860a4 476 Gene3D G3DSA:1.20.1280.70 359 420 4.6E-27 T 13-10-2018 Y11_16451 4965a62439fd10a267ae316ce80860a4 476 Gene3D G3DSA:2.30.30.450 213 353 6.7E-59 T 13-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily Y11_16451 4965a62439fd10a267ae316ce80860a4 476 Gene3D G3DSA:3.30.420.10 1 200 3.8E-71 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_41461 f4f4dd5fb8806640551d82df97423c0b 353 Pfam PF01464 Transglycosylase SLT domain 5 113 3.8E-28 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Y11_41461 f4f4dd5fb8806640551d82df97423c0b 353 SUPERFAMILY SSF54106 297 344 1.44E-9 T 13-10-2018 Y11_41461 f4f4dd5fb8806640551d82df97423c0b 353 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 20 48 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Y11_41461 f4f4dd5fb8806640551d82df97423c0b 353 SMART SM00257 299 344 8.2E-8 T 13-10-2018 IPR018392 LysM domain Y11_41461 f4f4dd5fb8806640551d82df97423c0b 353 SMART SM00257 245 289 6.3E-13 T 13-10-2018 IPR018392 LysM domain Y11_41461 f4f4dd5fb8806640551d82df97423c0b 353 Pfam PF01476 LysM domain 246 287 5.1E-13 T 13-10-2018 IPR018392 LysM domain Y11_41461 f4f4dd5fb8806640551d82df97423c0b 353 Pfam PF01476 LysM domain 300 343 6.6E-9 T 13-10-2018 IPR018392 LysM domain Y11_41461 f4f4dd5fb8806640551d82df97423c0b 353 SUPERFAMILY SSF54106 244 288 2.22E-10 T 13-10-2018 Y11_41461 f4f4dd5fb8806640551d82df97423c0b 353 Gene3D G3DSA:1.10.530.10 1 149 2.2E-31 T 13-10-2018 Y11_41461 f4f4dd5fb8806640551d82df97423c0b 353 Gene3D G3DSA:3.10.350.10 297 346 1.2E-12 T 13-10-2018 IPR036779 LysM domain superfamily Y11_41461 f4f4dd5fb8806640551d82df97423c0b 353 Gene3D G3DSA:3.10.350.10 241 296 2.6E-15 T 13-10-2018 IPR036779 LysM domain superfamily Y11_41461 f4f4dd5fb8806640551d82df97423c0b 353 SUPERFAMILY SSF53955 2 150 1.69E-39 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Y11_25091 e0ccd44be4159fd7884b28ec15e37348 508 Pfam PF08275 DNA primase catalytic core, N-terminal domain 52 177 3.7E-44 T 13-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Y11_25091 e0ccd44be4159fd7884b28ec15e37348 508 SUPERFAMILY SSF117023 373 504 6.15E-47 T 13-10-2018 Y11_25091 e0ccd44be4159fd7884b28ec15e37348 508 SMART SM00766 376 501 8.9E-56 T 13-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 Y11_25091 e0ccd44be4159fd7884b28ec15e37348 508 Gene3D G3DSA:1.20.50.20 294 352 6.4E-29 T 13-10-2018 Y11_25091 e0ccd44be4159fd7884b28ec15e37348 508 Gene3D G3DSA:1.10.860.10 360 507 2.9E-53 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Y11_25091 e0ccd44be4159fd7884b28ec15e37348 508 Gene3D G3DSA:3.90.980.10 41 166 2.3E-48 T 13-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Y11_25091 e0ccd44be4159fd7884b28ec15e37348 508 Pfam PF10410 DnaB-helicase binding domain of primase 296 350 2.0E-12 T 13-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 Y11_25091 e0ccd44be4159fd7884b28ec15e37348 508 SUPERFAMILY SSF56731 41 353 9.94E-115 T 13-10-2018 Y11_25091 e0ccd44be4159fd7884b28ec15e37348 508 Pfam PF08278 DNA primase DnaG DnaB-binding 377 500 1.8E-35 T 13-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 Y11_25091 e0ccd44be4159fd7884b28ec15e37348 508 Gene3D G3DSA:3.40.1360.10 167 293 1.4E-44 T 13-10-2018 Y11_25091 e0ccd44be4159fd7884b28ec15e37348 508 TIGRFAM TIGR01391 dnaG: DNA primase 1 345 7.1E-109 T 13-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Y11_25091 e0ccd44be4159fd7884b28ec15e37348 508 SMART SM00493 185 256 1.8E-22 T 13-10-2018 IPR006171 TOPRIM domain Y11_25091 e0ccd44be4159fd7884b28ec15e37348 508 Pfam PF13155 Toprim-like 189 274 1.7E-14 T 13-10-2018 Y11_08181 5c1c3cf553f74a54c41c5e28ddf8028c 123 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 4.0E-18 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Y11_08181 5c1c3cf553f74a54c41c5e28ddf8028c 123 Gene3D G3DSA:2.60.300.12 18 123 1.9E-33 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Y11_08181 5c1c3cf553f74a54c41c5e28ddf8028c 123 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 122 9.8E-32 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Y11_08181 5c1c3cf553f74a54c41c5e28ddf8028c 123 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 104 121 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Y11_08181 5c1c3cf553f74a54c41c5e28ddf8028c 123 SUPERFAMILY SSF89360 19 112 1.73E-26 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Y11_18121 294b226a442acb011e61541ddec8f08d 670 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 663 0.0 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Y11_18121 294b226a442acb011e61541ddec8f08d 670 SUPERFAMILY SSF52540 4 415 4.57E-139 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_18121 294b226a442acb011e61541ddec8f08d 670 Pfam PF00271 Helicase conserved C-terminal domain 439 544 1.2E-17 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_18121 294b226a442acb011e61541ddec8f08d 670 SUPERFAMILY SSF46600 618 666 1.44E-12 T 13-10-2018 IPR036876 UVR domain superfamily Y11_18121 294b226a442acb011e61541ddec8f08d 670 Gene3D G3DSA:3.40.50.300 271 414 4.3E-52 T 13-10-2018 Y11_18121 294b226a442acb011e61541ddec8f08d 670 Gene3D G3DSA:3.40.50.300 415 596 1.8E-48 T 13-10-2018 Y11_18121 294b226a442acb011e61541ddec8f08d 670 Gene3D G3DSA:3.40.50.300 1 241 4.0E-76 T 13-10-2018 Y11_18121 294b226a442acb011e61541ddec8f08d 670 Gene3D G3DSA:4.10.860.10 613 670 2.8E-22 T 13-10-2018 Y11_18121 294b226a442acb011e61541ddec8f08d 670 SUPERFAMILY SSF52540 37 579 1.54E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_18121 294b226a442acb011e61541ddec8f08d 670 SMART SM00487 9 426 4.8E-29 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Y11_18121 294b226a442acb011e61541ddec8f08d 670 SMART SM00490 460 546 6.3E-20 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_18121 294b226a442acb011e61541ddec8f08d 670 Pfam PF12344 Ultra-violet resistance protein B 552 593 7.5E-20 T 13-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Y11_18121 294b226a442acb011e61541ddec8f08d 670 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 665 44.042 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Y11_18121 294b226a442acb011e61541ddec8f08d 670 Pfam PF02151 UvrB/uvrC motif 631 665 2.3E-9 T 13-10-2018 IPR001943 UVR domain GO:0005515 Y11_18121 294b226a442acb011e61541ddec8f08d 670 Pfam PF04851 Type III restriction enzyme, res subunit 11 92 1.0E-9 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Y11_18301 0213a77dc09bad4448aef88dc7d60d2c 272 Pfam PF02517 CAAX protease self-immunity 172 259 8.0E-18 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Y11_04651 c80a9e6d0401340a3d84e05490b8d08d 119 Pfam PF04993 TfoX N-terminal domain 17 105 4.6E-26 T 13-10-2018 IPR007076 TfoX, N-terminal Y11_04651 c80a9e6d0401340a3d84e05490b8d08d 119 Gene3D G3DSA:3.30.1460.30 6 108 4.2E-28 T 13-10-2018 Y11_04651 c80a9e6d0401340a3d84e05490b8d08d 119 SUPERFAMILY SSF159894 15 106 2.62E-28 T 13-10-2018 Y11_16601 444b81ff6e28d2252e9abead84331b31 468 SMART SM01350 179 468 8.1E-224 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Y11_16601 444b81ff6e28d2252e9abead84331b31 468 Gene3D G3DSA:1.20.5.320 436 468 7.9E-22 T 13-10-2018 Y11_16601 444b81ff6e28d2252e9abead84331b31 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 467 1.2E-133 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Y11_16601 444b81ff6e28d2252e9abead84331b31 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 8.5E-52 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Y11_16601 444b81ff6e28d2252e9abead84331b31 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 13-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Y11_16601 444b81ff6e28d2252e9abead84331b31 468 PIRSF PIRSF000109 1 468 9.9E-241 T 13-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Y11_16601 444b81ff6e28d2252e9abead84331b31 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 1.5E-89 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Y11_16601 444b81ff6e28d2252e9abead84331b31 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Y11_16601 444b81ff6e28d2252e9abead84331b31 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.5E-89 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Y11_16601 444b81ff6e28d2252e9abead84331b31 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Y11_16601 444b81ff6e28d2252e9abead84331b31 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.5E-89 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Y11_16601 444b81ff6e28d2252e9abead84331b31 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Y11_16601 444b81ff6e28d2252e9abead84331b31 468 SUPERFAMILY SSF51735 4 172 3.26E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_16601 444b81ff6e28d2252e9abead84331b31 468 Gene3D G3DSA:1.10.1040.10 181 435 1.0E-110 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Y11_16601 444b81ff6e28d2252e9abead84331b31 468 Gene3D G3DSA:3.40.50.720 1 180 5.3E-57 T 13-10-2018 Y11_16601 444b81ff6e28d2252e9abead84331b31 468 SUPERFAMILY SSF48179 177 467 5.1E-132 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_16601 444b81ff6e28d2252e9abead84331b31 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 1.0E-227 T 13-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Y11_40101 75923d6685d3e79eb3e75f30f88f58fe 289 Gene3D G3DSA:1.20.58.410 1 40 2.8E-7 T 13-10-2018 Y11_40101 75923d6685d3e79eb3e75f30f88f58fe 289 Gene3D G3DSA:3.30.70.1660 54 282 6.4E-98 T 13-10-2018 Y11_40101 75923d6685d3e79eb3e75f30f88f58fe 289 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 287 1.5E-151 T 13-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Y11_40101 75923d6685d3e79eb3e75f30f88f58fe 289 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 4 289 32.026 T 13-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Y11_40101 75923d6685d3e79eb3e75f30f88f58fe 289 Pfam PF03462 PCRF domain 9 143 7.7E-46 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 Y11_40101 75923d6685d3e79eb3e75f30f88f58fe 289 SUPERFAMILY SSF75620 2 288 4.32E-129 T 13-10-2018 Y11_40101 75923d6685d3e79eb3e75f30f88f58fe 289 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 169 185 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Y11_40101 75923d6685d3e79eb3e75f30f88f58fe 289 SMART SM00937 9 119 9.1E-57 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 Y11_40101 75923d6685d3e79eb3e75f30f88f58fe 289 Gene3D G3DSA:3.30.160.20 150 245 6.4E-98 T 13-10-2018 Y11_40101 75923d6685d3e79eb3e75f30f88f58fe 289 Pfam PF00472 RF-1 domain 152 261 1.6E-41 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Y11_40521 cdd983d44b26ed8d073d7acc91dcd688 295 Pfam PF00753 Metallo-beta-lactamase superfamily 44 228 1.4E-7 T 13-10-2018 IPR001279 Metallo-beta-lactamase Y11_40521 cdd983d44b26ed8d073d7acc91dcd688 295 SMART SM00849 43 228 4.0E-17 T 13-10-2018 IPR001279 Metallo-beta-lactamase Y11_40521 cdd983d44b26ed8d073d7acc91dcd688 295 SUPERFAMILY SSF56281 27 251 3.91E-40 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_40521 cdd983d44b26ed8d073d7acc91dcd688 295 Gene3D G3DSA:3.60.15.10 25 262 5.2E-27 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_43271 605b2b90121782766df7d99c8da964a2 239 Gene3D G3DSA:3.40.50.2300 2 140 2.4E-36 T 13-10-2018 Y11_43271 605b2b90121782766df7d99c8da964a2 239 SMART SM00862 155 231 8.3E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_43271 605b2b90121782766df7d99c8da964a2 239 SUPERFAMILY SSF52172 12 189 3.81E-40 T 13-10-2018 IPR011006 CheY-like superfamily Y11_43271 605b2b90121782766df7d99c8da964a2 239 Pfam PF00072 Response regulator receiver domain 14 122 1.7E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_43271 605b2b90121782766df7d99c8da964a2 239 Gene3D G3DSA:1.10.10.10 141 238 2.9E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_43271 605b2b90121782766df7d99c8da964a2 239 SMART SM00448 12 122 2.5E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_43271 605b2b90121782766df7d99c8da964a2 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 230 3.3E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_14041 b2283fe7fcd51229407457c392be09eb 369 SUPERFAMILY SSF64518 1 369 7.06E-98 T 13-10-2018 Y11_14041 b2283fe7fcd51229407457c392be09eb 369 Gene3D G3DSA:1.20.1330.10 44 179 4.4E-73 T 13-10-2018 Y11_14041 b2283fe7fcd51229407457c392be09eb 369 Gene3D G3DSA:1.20.58.1830 4 32 4.4E-73 T 13-10-2018 Y11_14041 b2283fe7fcd51229407457c392be09eb 369 Gene3D G3DSA:1.10.8.410 317 369 3.2E-23 T 13-10-2018 Y11_14041 b2283fe7fcd51229407457c392be09eb 369 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 139 3.9E-42 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Y11_14041 b2283fe7fcd51229407457c392be09eb 369 PRINTS PR00207 Flagellin signature 75 94 4.9E-30 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Y11_14041 b2283fe7fcd51229407457c392be09eb 369 PRINTS PR00207 Flagellin signature 110 133 4.9E-30 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Y11_14041 b2283fe7fcd51229407457c392be09eb 369 PRINTS PR00207 Flagellin signature 36 53 4.9E-30 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Y11_14041 b2283fe7fcd51229407457c392be09eb 369 Pfam PF00700 Bacterial flagellin C-terminal helical region 284 368 2.9E-30 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Y11_14041 b2283fe7fcd51229407457c392be09eb 369 Gene3D G3DSA:2.30.220.10 197 278 4.4E-73 T 13-10-2018 Y11_14041 b2283fe7fcd51229407457c392be09eb 369 Gene3D G3DSA:2.170.280.10 180 196 4.4E-73 T 13-10-2018 Y11_06931 5381a9ccf807a7031f137faee0bba008 289 SUPERFAMILY SSF53335 70 277 8.75E-33 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_06931 5381a9ccf807a7031f137faee0bba008 289 Pfam PF03848 Tellurite resistance protein TehB 93 285 1.2E-105 T 13-10-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain Y11_06931 5381a9ccf807a7031f137faee0bba008 289 Pfam PF09313 Domain of unknown function (DUF1971) 11 91 1.5E-28 T 13-10-2018 IPR015392 Domain of unknown function DUF1971 Y11_06931 5381a9ccf807a7031f137faee0bba008 289 Gene3D G3DSA:3.40.50.150 110 289 1.2E-42 T 13-10-2018 Y11_06931 5381a9ccf807a7031f137faee0bba008 289 PIRSF PIRSF005215 1 289 1.9E-145 T 13-10-2018 IPR014431 Tellurite resistance methyltransferase, TehB type-2 Y11_06931 5381a9ccf807a7031f137faee0bba008 289 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 51 288 3.0E-109 T 13-10-2018 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 Y11_06931 5381a9ccf807a7031f137faee0bba008 289 Gene3D G3DSA:2.60.120.10 3 109 3.0E-40 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_06931 5381a9ccf807a7031f137faee0bba008 289 SUPERFAMILY SSF51197 5 104 2.06E-34 T 13-10-2018 Y11_34681 8e80229d46640573023f783007dd9550 259 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 3.8E-78 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Y11_34681 8e80229d46640573023f783007dd9550 259 ProSitePatterns PS01218 TatC family signature. 154 173 - T 13-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site Y11_34681 8e80229d46640573023f783007dd9550 259 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 7 241 15.886 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Y11_34681 8e80229d46640573023f783007dd9550 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 1.2E-49 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Y11_34681 8e80229d46640573023f783007dd9550 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 1.2E-49 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Y11_34681 8e80229d46640573023f783007dd9550 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 1.2E-49 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Y11_34681 8e80229d46640573023f783007dd9550 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 1.2E-49 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Y11_34681 8e80229d46640573023f783007dd9550 259 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 1.1E-63 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Y11_21541 5358a8269f67f6b363b57cc97deb4449 527 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 175 479 8.8E-16 T 13-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal Y11_21541 5358a8269f67f6b363b57cc97deb4449 527 Gene3D G3DSA:3.10.20.310 6 97 8.5E-17 T 13-10-2018 Y11_21541 5358a8269f67f6b363b57cc97deb4449 527 Pfam PF08479 POTRA domain, ShlB-type 18 97 1.0E-11 T 13-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type Y11_21541 5358a8269f67f6b363b57cc97deb4449 527 Gene3D G3DSA:2.40.160.50 144 524 1.2E-61 T 13-10-2018 Y11_43471 93dca4161445640c32786c541d97185f 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 6.2E-64 T 13-10-2018 Y11_43471 93dca4161445640c32786c541d97185f 208 SUPERFAMILY SSF53271 4 206 1.7E-66 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Y11_43471 93dca4161445640c32786c541d97185f 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 43.773 T 13-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Y11_43471 93dca4161445640c32786c541d97185f 208 Gene3D G3DSA:3.40.50.2020 1 208 3.1E-72 T 13-10-2018 Y11_43471 93dca4161445640c32786c541d97185f 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 1.6E-89 T 13-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Y11_22841 9fc6b4bbb3fe05bcd813f6fa3fbd7b7c 499 SUPERFAMILY SSF50465 359 459 7.19E-29 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Y11_22841 9fc6b4bbb3fe05bcd813f6fa3fbd7b7c 499 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 43 499 53.192 T 13-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Y11_22841 9fc6b4bbb3fe05bcd813f6fa3fbd7b7c 499 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 52 458 3.0E-204 T 13-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Y11_22841 9fc6b4bbb3fe05bcd813f6fa3fbd7b7c 499 SUPERFAMILY SSF52540 45 259 2.56E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_22841 9fc6b4bbb3fe05bcd813f6fa3fbd7b7c 499 PRINTS PR00315 GTP-binding elongation factor signature 150 161 1.0E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_22841 9fc6b4bbb3fe05bcd813f6fa3fbd7b7c 499 PRINTS PR00315 GTP-binding elongation factor signature 114 122 1.0E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_22841 9fc6b4bbb3fe05bcd813f6fa3fbd7b7c 499 PRINTS PR00315 GTP-binding elongation factor signature 187 196 1.0E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_22841 9fc6b4bbb3fe05bcd813f6fa3fbd7b7c 499 PRINTS PR00315 GTP-binding elongation factor signature 53 66 1.0E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_22841 9fc6b4bbb3fe05bcd813f6fa3fbd7b7c 499 PRINTS PR00315 GTP-binding elongation factor signature 134 144 1.0E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_22841 9fc6b4bbb3fe05bcd813f6fa3fbd7b7c 499 Pfam PF00009 Elongation factor Tu GTP binding domain 50 255 1.1E-44 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_22841 9fc6b4bbb3fe05bcd813f6fa3fbd7b7c 499 Gene3D G3DSA:3.40.50.300 30 264 1.8E-72 T 13-10-2018 Y11_22841 9fc6b4bbb3fe05bcd813f6fa3fbd7b7c 499 Gene3D G3DSA:2.40.30.10 356 459 9.3E-29 T 13-10-2018 Y11_22841 9fc6b4bbb3fe05bcd813f6fa3fbd7b7c 499 SUPERFAMILY SSF50447 266 352 7.95E-23 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Y11_22841 9fc6b4bbb3fe05bcd813f6fa3fbd7b7c 499 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 58 238 1.2E-17 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Y11_22841 9fc6b4bbb3fe05bcd813f6fa3fbd7b7c 499 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 107 122 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Y11_22841 9fc6b4bbb3fe05bcd813f6fa3fbd7b7c 499 Gene3D G3DSA:2.40.30.10 266 353 6.1E-25 T 13-10-2018 Y11_22631 098204613739a7d482c176c4b9353180 171 SUPERFAMILY SSF49401 47 171 2.14E-24 T 13-10-2018 IPR008966 Adhesion domain superfamily Y11_22631 098204613739a7d482c176c4b9353180 171 Pfam PF00419 Fimbrial protein 38 171 1.6E-13 T 13-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 Y11_22631 098204613739a7d482c176c4b9353180 171 Gene3D G3DSA:2.60.40.1090 49 171 1.1E-35 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Y11_18271 3d526817b6274f233ee68790ac91f98b 263 Gene3D G3DSA:2.40.50.100 183 253 1.2E-17 T 13-10-2018 Y11_18271 3d526817b6274f233ee68790ac91f98b 263 Gene3D G3DSA:2.40.50.100 108 182 2.8E-24 T 13-10-2018 Y11_18271 3d526817b6274f233ee68790ac91f98b 263 SUPERFAMILY SSF46785 2 103 1.21E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_18271 3d526817b6274f233ee68790ac91f98b 263 Gene3D G3DSA:1.10.10.10 1 107 3.7E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_18271 3d526817b6274f233ee68790ac91f98b 263 SUPERFAMILY SSF50331 170 259 5.86E-15 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Y11_18271 3d526817b6274f233ee68790ac91f98b 263 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 7.3E-13 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_18271 3d526817b6274f233ee68790ac91f98b 263 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 191 3.4E-26 T 13-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 Y11_18271 3d526817b6274f233ee68790ac91f98b 263 SUPERFAMILY SSF50331 122 191 8.5E-19 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Y11_18271 3d526817b6274f233ee68790ac91f98b 263 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 112 6.6E-38 T 13-10-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal Y11_18271 3d526817b6274f233ee68790ac91f98b 263 PIRSF PIRSF005763 1 263 4.9E-94 T 13-10-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 Y11_18271 3d526817b6274f233ee68790ac91f98b 263 Pfam PF03459 TOBE domain 124 188 6.0E-15 T 13-10-2018 IPR005116 Transport-associated OB, type 1 Y11_18271 3d526817b6274f233ee68790ac91f98b 263 Pfam PF03459 TOBE domain 198 258 1.1E-12 T 13-10-2018 IPR005116 Transport-associated OB, type 1 Y11_08531 404350eeaf8b4338e0ed36412d68e99e 91 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 1 84 3.0E-29 T 13-10-2018 IPR020317 Uncharacterised protein family YjbD Y11_08531 404350eeaf8b4338e0ed36412d68e99e 91 Pfam PF11656 YjbD family (DUF3811) 1 70 3.0E-29 T 13-10-2018 IPR020317 Uncharacterised protein family YjbD Y11_34021 c6d623b66e431ac9ee52558959c9b24b 293 Gene3D G3DSA:2.40.230.10 34 293 6.9E-105 T 13-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Y11_34021 c6d623b66e431ac9ee52558959c9b24b 293 SUPERFAMILY SSF56931 40 292 3.66E-93 T 13-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Y11_34021 c6d623b66e431ac9ee52558959c9b24b 293 Pfam PF02253 Phospholipase A1 44 289 9.1E-97 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Y11_34021 c6d623b66e431ac9ee52558959c9b24b 293 PRINTS PR01486 Bacterial phospholipase A1 protein signature 82 99 5.0E-83 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Y11_34021 c6d623b66e431ac9ee52558959c9b24b 293 PRINTS PR01486 Bacterial phospholipase A1 protein signature 172 190 5.0E-83 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Y11_34021 c6d623b66e431ac9ee52558959c9b24b 293 PRINTS PR01486 Bacterial phospholipase A1 protein signature 104 120 5.0E-83 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Y11_34021 c6d623b66e431ac9ee52558959c9b24b 293 PRINTS PR01486 Bacterial phospholipase A1 protein signature 262 282 5.0E-83 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Y11_34021 c6d623b66e431ac9ee52558959c9b24b 293 PRINTS PR01486 Bacterial phospholipase A1 protein signature 127 146 5.0E-83 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Y11_34021 c6d623b66e431ac9ee52558959c9b24b 293 PRINTS PR01486 Bacterial phospholipase A1 protein signature 207 225 5.0E-83 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Y11_34021 c6d623b66e431ac9ee52558959c9b24b 293 PRINTS PR01486 Bacterial phospholipase A1 protein signature 240 257 5.0E-83 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Y11_34021 c6d623b66e431ac9ee52558959c9b24b 293 PRINTS PR01486 Bacterial phospholipase A1 protein signature 157 171 5.0E-83 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Y11_00371 fbaf36ddf8bd5ea7be1d745162f0001f 831 SMART SM00926 40 94 6.7E-16 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_00371 fbaf36ddf8bd5ea7be1d745162f0001f 831 Gene3D G3DSA:3.40.50.740 97 624 0.0 T 13-10-2018 Y11_00371 fbaf36ddf8bd5ea7be1d745162f0001f 831 Pfam PF01568 Molydopterin dinucleotide binding domain 715 823 8.9E-25 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Y11_00371 fbaf36ddf8bd5ea7be1d745162f0001f 831 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 7.3E-5 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Y11_00371 fbaf36ddf8bd5ea7be1d745162f0001f 831 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 23 4.2E-6 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Y11_00371 fbaf36ddf8bd5ea7be1d745162f0001f 831 Gene3D G3DSA:2.40.40.20 705 829 4.0E-48 T 13-10-2018 Y11_00371 fbaf36ddf8bd5ea7be1d745162f0001f 831 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 40 93 9.6E-18 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_00371 fbaf36ddf8bd5ea7be1d745162f0001f 831 Gene3D G3DSA:3.30.200.210 40 667 0.0 T 13-10-2018 Y11_00371 fbaf36ddf8bd5ea7be1d745162f0001f 831 Pfam PF00384 Molybdopterin oxidoreductase 97 569 8.9E-91 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_00371 fbaf36ddf8bd5ea7be1d745162f0001f 831 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 829 32.366 T 13-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 Y11_00371 fbaf36ddf8bd5ea7be1d745162f0001f 831 Gene3D G3DSA:3.40.228.10 176 704 0.0 T 13-10-2018 Y11_00371 fbaf36ddf8bd5ea7be1d745162f0001f 831 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 45 62 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Y11_00371 fbaf36ddf8bd5ea7be1d745162f0001f 831 SUPERFAMILY SSF50692 689 828 9.04E-42 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Y11_00371 fbaf36ddf8bd5ea7be1d745162f0001f 831 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 829 0.0 T 13-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 Y11_00371 fbaf36ddf8bd5ea7be1d745162f0001f 831 SUPERFAMILY SSF53706 37 702 1.11E-202 T 13-10-2018 Y11_40491 e1c3bc815e6475da9421936dba8758bd 268 Gene3D G3DSA:1.10.287.950 185 268 1.4E-7 T 13-10-2018 Y11_40491 e1c3bc815e6475da9421936dba8758bd 268 SMART SM00319 12 148 0.0086 T 13-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 Y11_40491 e1c3bc815e6475da9421936dba8758bd 268 Gene3D G3DSA:1.20.120.30 1 157 4.5E-41 T 13-10-2018 Y11_40491 e1c3bc815e6475da9421936dba8758bd 268 SUPERFAMILY SSF47170 1 142 2.35E-38 T 13-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Y11_40491 e1c3bc815e6475da9421936dba8758bd 268 SMART SM00304 182 236 1.2E-4 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_40491 e1c3bc815e6475da9421936dba8758bd 268 Pfam PF02203 Tar ligand binding domain homologue 1 139 9.3E-23 T 13-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 Y11_38541 2ce1c8035847199c62d30193cdb49893 225 Pfam PF01810 LysE type translocator 36 224 1.3E-38 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Y11_38541 2ce1c8035847199c62d30193cdb49893 225 PIRSF PIRSF006324 20 225 4.3E-58 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Y11_30481 33633f683d4dd0a438eedadfee0d0e2c 323 Pfam PF09163 Formate dehydrogenase N, transmembrane 248 290 1.3E-22 T 13-10-2018 IPR015246 Formate dehydrogenase, transmembrane Y11_30481 33633f683d4dd0a438eedadfee0d0e2c 323 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 292 3.5E-141 T 13-10-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 Y11_30481 33633f683d4dd0a438eedadfee0d0e2c 323 Gene3D G3DSA:1.20.5.480 249 296 5.9E-27 T 13-10-2018 IPR038384 Formate dehydrogenase, C-terminal domain superfamily Y11_30481 33633f683d4dd0a438eedadfee0d0e2c 323 Gene3D G3DSA:3.30.70.20 18 164 2.2E-101 T 13-10-2018 Y11_30481 33633f683d4dd0a438eedadfee0d0e2c 323 Gene3D G3DSA:3.30.70.20 28 229 2.2E-101 T 13-10-2018 Y11_30481 33633f683d4dd0a438eedadfee0d0e2c 323 SUPERFAMILY SSF54862 28 274 9.21E-70 T 13-10-2018 Y11_30481 33633f683d4dd0a438eedadfee0d0e2c 323 PIRSF PIRSF036298 1 315 2.6E-166 T 13-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 Y11_30481 33633f683d4dd0a438eedadfee0d0e2c 323 Pfam PF13247 4Fe-4S dicluster domain 94 190 8.8E-25 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_30481 33633f683d4dd0a438eedadfee0d0e2c 323 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 135 146 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_27821 dd3b4418ea27a9fbdbcf247ecf0fb3fc 279 SMART SM00346 27 117 2.8E-33 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Y11_27821 dd3b4418ea27a9fbdbcf247ecf0fb3fc 279 SUPERFAMILY SSF46785 27 100 1.24E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_27821 dd3b4418ea27a9fbdbcf247ecf0fb3fc 279 Gene3D G3DSA:1.10.10.10 25 100 6.0E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_27821 dd3b4418ea27a9fbdbcf247ecf0fb3fc 279 Pfam PF01614 Bacterial transcriptional regulator 148 271 1.9E-39 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal Y11_27821 dd3b4418ea27a9fbdbcf247ecf0fb3fc 279 Gene3D G3DSA:3.30.450.40 101 278 5.9E-66 T 13-10-2018 IPR029016 GAF-like domain superfamily Y11_27821 dd3b4418ea27a9fbdbcf247ecf0fb3fc 279 SUPERFAMILY SSF55781 98 274 7.85E-50 T 13-10-2018 Y11_27821 dd3b4418ea27a9fbdbcf247ecf0fb3fc 279 Pfam PF09339 IclR helix-turn-helix domain 29 79 3.1E-18 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Y11_42801 56206787f047569d56eafd0ba37f28d1 841 SUPERFAMILY SSF103515 550 841 1.83E-42 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Y11_42801 56206787f047569d56eafd0ba37f28d1 841 Gene3D G3DSA:2.40.128.130 539 841 1.3E-50 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Y11_42801 56206787f047569d56eafd0ba37f28d1 841 SUPERFAMILY SSF51126 43 536 3.14E-17 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor Y11_42801 56206787f047569d56eafd0ba37f28d1 841 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 275 308 1.8E-5 T 13-10-2018 IPR030930 Adhesin of bacterial autotransporter system Y11_42801 56206787f047569d56eafd0ba37f28d1 841 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 242 274 9.7E-5 T 13-10-2018 IPR030930 Adhesin of bacterial autotransporter system Y11_42801 56206787f047569d56eafd0ba37f28d1 841 Pfam PF03212 Pertactin 428 535 1.6E-13 T 13-10-2018 IPR004899 Pertactin, central region Y11_42801 56206787f047569d56eafd0ba37f28d1 841 Gene3D G3DSA:2.160.20.20 151 538 3.1E-33 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily Y11_42801 56206787f047569d56eafd0ba37f28d1 841 SMART SM00869 580 830 1.7E-31 T 13-10-2018 IPR005546 Autotransporter beta-domain Y11_42801 56206787f047569d56eafd0ba37f28d1 841 Pfam PF03797 Autotransporter beta-domain 583 817 1.3E-33 T 13-10-2018 IPR005546 Autotransporter beta-domain Y11_42801 56206787f047569d56eafd0ba37f28d1 841 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 444 841 3.2E-79 T 13-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 Y11_02151 cd7ef8a598d387fc4cfda69f360ca9f8 163 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 9 126 19.967 T 13-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 Y11_02151 cd7ef8a598d387fc4cfda69f360ca9f8 163 Gene3D G3DSA:1.20.58.1610 1 126 5.1E-43 T 13-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02151 cd7ef8a598d387fc4cfda69f360ca9f8 163 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 29 125 1.6E-31 T 13-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02201 4fc5419b65e83a91b7b1958f2522482f 847 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 83 93 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02201 4fc5419b65e83a91b7b1958f2522482f 847 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 154 207 4.7E-10 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02201 4fc5419b65e83a91b7b1958f2522482f 847 SMART SM00926 154 208 2.4E-9 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02201 4fc5419b65e83a91b7b1958f2522482f 847 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 1 594 9.5E-172 T 13-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02201 4fc5419b65e83a91b7b1958f2522482f 847 SUPERFAMILY SSF53706 152 626 7.54E-80 T 13-10-2018 Y11_02201 4fc5419b65e83a91b7b1958f2522482f 847 Gene3D G3DSA:2.40.40.20 751 841 5.8E-9 T 13-10-2018 Y11_02201 4fc5419b65e83a91b7b1958f2522482f 847 SMART SM00929 21 61 1.9E-19 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02201 4fc5419b65e83a91b7b1958f2522482f 847 Gene3D G3DSA:3.40.50.740 444 608 5.1E-11 T 13-10-2018 Y11_02201 4fc5419b65e83a91b7b1958f2522482f 847 SUPERFAMILY SSF50692 754 829 3.84E-13 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Y11_02201 4fc5419b65e83a91b7b1958f2522482f 847 Pfam PF00384 Molybdopterin oxidoreductase 489 570 1.0E-7 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02201 4fc5419b65e83a91b7b1958f2522482f 847 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 21 57 1.0E-14 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02201 4fc5419b65e83a91b7b1958f2522482f 847 Gene3D G3DSA:2.20.25.90 154 208 8.7E-13 T 13-10-2018 Y11_02201 4fc5419b65e83a91b7b1958f2522482f 847 SUPERFAMILY SSF54862 15 146 6.28E-34 T 13-10-2018 Y11_02201 4fc5419b65e83a91b7b1958f2522482f 847 Pfam PF01568 Molydopterin dinucleotide binding domain 765 829 3.5E-7 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Y11_02201 4fc5419b65e83a91b7b1958f2522482f 847 Gene3D G3DSA:3.10.20.740 1 60 1.0E-8 T 13-10-2018 Y11_02201 4fc5419b65e83a91b7b1958f2522482f 847 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 36 48 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_08471 ce64ac20c4be9fef7396861d960778df 370 Gene3D G3DSA:3.30.420.40 145 327 7.8E-131 T 13-10-2018 Y11_08471 ce64ac20c4be9fef7396861d960778df 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 41.019 T 13-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Y11_08471 ce64ac20c4be9fef7396861d960778df 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 366 3.4E-162 T 13-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Y11_08471 ce64ac20c4be9fef7396861d960778df 370 SUPERFAMILY SSF53067 6 341 3.37E-26 T 13-10-2018 Y11_08471 ce64ac20c4be9fef7396861d960778df 370 Gene3D G3DSA:3.30.420.40 11 362 7.8E-131 T 13-10-2018 Y11_14761 07d9486d910db8b9608eef612179ab04 579 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 318 340 - T 13-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Y11_14761 07d9486d910db8b9608eef612179ab04 579 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 351 508 1.1E-53 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_14761 07d9486d910db8b9608eef612179ab04 579 SUPERFAMILY SSF58104 260 541 4.45E-73 T 13-10-2018 Y11_14761 07d9486d910db8b9608eef612179ab04 579 SMART SM00304 240 292 7.3E-13 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_14761 07d9486d910db8b9608eef612179ab04 579 Pfam PF00672 HAMP domain 242 287 1.5E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_14761 07d9486d910db8b9608eef612179ab04 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 468 497 1.9E-60 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14761 07d9486d910db8b9608eef612179ab04 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 30 55 1.9E-60 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14761 07d9486d910db8b9608eef612179ab04 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 343 1.9E-60 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14761 07d9486d910db8b9608eef612179ab04 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 418 1.9E-60 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14761 07d9486d910db8b9608eef612179ab04 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 1.9E-60 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14761 07d9486d910db8b9608eef612179ab04 579 SMART SM00283 293 540 1.6E-89 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_14761 07d9486d910db8b9608eef612179ab04 579 SUPERFAMILY SSF47170 56 190 1.28E-13 T 13-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Y11_14761 07d9486d910db8b9608eef612179ab04 579 Gene3D G3DSA:1.10.287.950 240 542 2.9E-92 T 13-10-2018 Y11_14761 07d9486d910db8b9608eef612179ab04 579 Pfam PF02203 Tar ligand binding domain homologue 27 193 3.4E-27 T 13-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 Y11_p0831 4663d409d770ff8f6b8b876637656c2e 114 SUPERFAMILY SSF48452 9 111 1.59E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_p0831 4663d409d770ff8f6b8b876637656c2e 114 Gene3D G3DSA:1.25.40.10 2 114 1.2E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_p0831 4663d409d770ff8f6b8b876637656c2e 114 PIRSF PIRSF017117 3 112 4.6E-45 T 13-10-2018 IPR016684 Type III secretion system chaperone, YscY Y11_27931 86234878541b0e2841641b48f092b3bc 210 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 1 209 52.469 T 13-10-2018 IPR023764 Transcriptional repressor HTH, FabR Y11_27931 86234878541b0e2841641b48f092b3bc 210 SUPERFAMILY SSF46689 3 77 2.32E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_27931 86234878541b0e2841641b48f092b3bc 210 Gene3D G3DSA:1.10.10.60 2 52 1.8E-22 T 13-10-2018 Y11_27931 86234878541b0e2841641b48f092b3bc 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 2.4E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Y11_27931 86234878541b0e2841641b48f092b3bc 210 Gene3D G3DSA:1.10.357.10 53 209 4.4E-43 T 13-10-2018 Y11_02571 dacdd34a7144643b69b0771af7477b9d 1280 SUPERFAMILY SSF51120 694 791 1.22E-11 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_02571 dacdd34a7144643b69b0771af7477b9d 1280 SUPERFAMILY SSF51120 573 715 2.01E-18 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_02571 dacdd34a7144643b69b0771af7477b9d 1280 Gene3D G3DSA:2.150.10.10 722 826 2.0E-7 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_02571 dacdd34a7144643b69b0771af7477b9d 1280 Gene3D G3DSA:2.150.10.10 565 650 1.8E-8 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_02571 dacdd34a7144643b69b0771af7477b9d 1280 Gene3D G3DSA:2.150.10.10 651 721 1.5E-8 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_02571 dacdd34a7144643b69b0771af7477b9d 1280 Pfam PF00082 Subtilase family 999 1238 2.4E-23 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Y11_02571 dacdd34a7144643b69b0771af7477b9d 1280 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 1189 1199 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Y11_02571 dacdd34a7144643b69b0771af7477b9d 1280 Gene3D G3DSA:3.40.50.200 926 1272 3.6E-56 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Y11_02571 dacdd34a7144643b69b0771af7477b9d 1280 PRINTS PR00313 NodO calcium binding signature 681 689 6.1E-8 T 13-10-2018 Y11_02571 dacdd34a7144643b69b0771af7477b9d 1280 PRINTS PR00313 NodO calcium binding signature 735 744 6.1E-8 T 13-10-2018 Y11_02571 dacdd34a7144643b69b0771af7477b9d 1280 PRINTS PR00313 NodO calcium binding signature 574 585 6.1E-8 T 13-10-2018 Y11_02571 dacdd34a7144643b69b0771af7477b9d 1280 PRINTS PR00313 NodO calcium binding signature 653 661 6.1E-8 T 13-10-2018 Y11_02571 dacdd34a7144643b69b0771af7477b9d 1280 ProSitePatterns PS00018 EF-hand calcium-binding domain. 464 476 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site Y11_02571 dacdd34a7144643b69b0771af7477b9d 1280 SUPERFAMILY SSF52743 937 1271 4.45E-46 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Y11_19261 43d5c210b1b04432325ef386875ac5b7 365 Pfam PF03330 Lytic transglycolase 76 164 3.0E-25 T 13-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain Y11_19261 43d5c210b1b04432325ef386875ac5b7 365 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 78 177 4.5E-36 T 13-10-2018 IPR012997 Rare lipoprotein A Y11_19261 43d5c210b1b04432325ef386875ac5b7 365 SUPERFAMILY SSF110997 290 362 2.35E-14 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Y11_19261 43d5c210b1b04432325ef386875ac5b7 365 Gene3D G3DSA:2.40.40.10 75 167 9.2E-33 T 13-10-2018 IPR036908 RlpA-like domain superfamily Y11_19261 43d5c210b1b04432325ef386875ac5b7 365 Gene3D G3DSA:3.30.70.1070 292 363 1.2E-11 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Y11_19261 43d5c210b1b04432325ef386875ac5b7 365 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 16 166 23.112 T 13-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 Y11_19261 43d5c210b1b04432325ef386875ac5b7 365 Pfam PF05036 Sporulation related domain 290 362 1.9E-14 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Y11_19261 43d5c210b1b04432325ef386875ac5b7 365 SUPERFAMILY SSF50685 76 164 6.98E-9 T 13-10-2018 IPR036908 RlpA-like domain superfamily Y11_08781 d98ee1180f164d42237a94f8273a4cdb 525 Gene3D G3DSA:1.10.8.60 378 455 1.1E-18 T 13-10-2018 Y11_08781 d98ee1180f164d42237a94f8273a4cdb 525 Gene3D G3DSA:1.10.10.60 457 514 8.5E-27 T 13-10-2018 Y11_08781 d98ee1180f164d42237a94f8273a4cdb 525 SMART SM00382 226 370 4.4E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_08781 d98ee1180f164d42237a94f8273a4cdb 525 SUPERFAMILY SSF46689 459 513 1.13E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_08781 d98ee1180f164d42237a94f8273a4cdb 525 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 466 513 7.8E-28 T 13-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 Y11_08781 d98ee1180f164d42237a94f8273a4cdb 525 SMART SM00091 80 146 2.9E-6 T 13-10-2018 IPR000014 PAS domain Y11_08781 d98ee1180f164d42237a94f8273a4cdb 525 SUPERFAMILY SSF55785 81 173 7.61E-9 T 13-10-2018 IPR035965 PAS domain superfamily Y11_08781 d98ee1180f164d42237a94f8273a4cdb 525 Gene3D G3DSA:3.30.70.260 1 81 3.8E-26 T 13-10-2018 Y11_08781 d98ee1180f164d42237a94f8273a4cdb 525 Gene3D G3DSA:3.40.50.300 194 377 5.0E-60 T 13-10-2018 Y11_08781 d98ee1180f164d42237a94f8273a4cdb 525 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 419 428 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Y11_08781 d98ee1180f164d42237a94f8273a4cdb 525 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y11_08781 d98ee1180f164d42237a94f8273a4cdb 525 Gene3D G3DSA:3.30.450.20 82 190 9.3E-29 T 13-10-2018 Y11_08781 d98ee1180f164d42237a94f8273a4cdb 525 Pfam PF00989 PAS fold 82 123 3.5E-6 T 13-10-2018 IPR013767 PAS fold GO:0006355 Y11_08781 d98ee1180f164d42237a94f8273a4cdb 525 SUPERFAMILY SSF52540 206 447 9.0E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_08781 d98ee1180f164d42237a94f8273a4cdb 525 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 292 307 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y11_08781 d98ee1180f164d42237a94f8273a4cdb 525 Pfam PF00158 Sigma-54 interaction domain 207 372 1.1E-60 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Y11_20541 b5680d25e625f6c2bf252f8c6ff454de 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 3.1E-213 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Y11_20541 b5680d25e625f6c2bf252f8c6ff454de 423 SUPERFAMILY SSF52540 63 402 2.04E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_20541 b5680d25e625f6c2bf252f8c6ff454de 423 SMART SM00994 12 51 1.0E-24 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Y11_20541 b5680d25e625f6c2bf252f8c6ff454de 423 SMART SM00382 111 302 2.4E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_20541 b5680d25e625f6c2bf252f8c6ff454de 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.324 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Y11_20541 b5680d25e625f6c2bf252f8c6ff454de 423 SUPERFAMILY SSF57716 13 48 5.84E-12 T 13-10-2018 Y11_20541 b5680d25e625f6c2bf252f8c6ff454de 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 394 5.0E-17 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Y11_20541 b5680d25e625f6c2bf252f8c6ff454de 423 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.2E-20 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Y11_20541 b5680d25e625f6c2bf252f8c6ff454de 423 SMART SM01086 317 412 5.8E-34 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Y11_20541 b5680d25e625f6c2bf252f8c6ff454de 423 Gene3D G3DSA:1.10.8.60 316 423 3.9E-42 T 13-10-2018 Y11_20541 b5680d25e625f6c2bf252f8c6ff454de 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 2.2E-48 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Y11_20541 b5680d25e625f6c2bf252f8c6ff454de 423 Gene3D G3DSA:3.30.50.30 2 52 9.3E-28 T 13-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Y11_20541 b5680d25e625f6c2bf252f8c6ff454de 423 Gene3D G3DSA:3.40.50.300 62 315 2.3E-108 T 13-10-2018 Y11_33291 7fdac47a83e862f0da25a135b0d4b981 155 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 105 7.1E-8 T 13-10-2018 IPR001451 Hexapeptide repeat Y11_33291 7fdac47a83e862f0da25a135b0d4b981 155 Gene3D G3DSA:2.160.10.10 1 155 1.8E-51 T 13-10-2018 Y11_33291 7fdac47a83e862f0da25a135b0d4b981 155 SUPERFAMILY SSF51161 1 150 2.36E-41 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Y11_33551 cf35044a64433c5a60fb616e8a56dddf 252 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 115 132 - T 13-10-2018 IPR018046 Pili assembly chaperone, conserved site Y11_33551 cf35044a64433c5a60fb616e8a56dddf 252 SUPERFAMILY SSF49354 32 161 9.68E-38 T 13-10-2018 IPR008962 PapD-like superfamily Y11_33551 cf35044a64433c5a60fb616e8a56dddf 252 PRINTS PR00969 Pili chaperone signature 87 108 8.8E-29 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_33551 cf35044a64433c5a60fb616e8a56dddf 252 PRINTS PR00969 Pili chaperone signature 38 47 8.8E-29 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_33551 cf35044a64433c5a60fb616e8a56dddf 252 PRINTS PR00969 Pili chaperone signature 143 158 8.8E-29 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_33551 cf35044a64433c5a60fb616e8a56dddf 252 PRINTS PR00969 Pili chaperone signature 116 133 8.8E-29 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_33551 cf35044a64433c5a60fb616e8a56dddf 252 PRINTS PR00969 Pili chaperone signature 182 197 8.8E-29 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_33551 cf35044a64433c5a60fb616e8a56dddf 252 SUPERFAMILY SSF49584 155 247 1.83E-16 T 13-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily Y11_33551 cf35044a64433c5a60fb616e8a56dddf 252 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 38 161 4.8E-40 T 13-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Y11_33551 cf35044a64433c5a60fb616e8a56dddf 252 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 187 245 8.9E-13 T 13-10-2018 IPR016148 Pili assembly chaperone, C-terminal Y11_33551 cf35044a64433c5a60fb616e8a56dddf 252 Gene3D G3DSA:2.60.40.10 39 161 1.8E-37 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_33551 cf35044a64433c5a60fb616e8a56dddf 252 Gene3D G3DSA:2.60.40.10 165 252 1.2E-17 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_00221 e79b532145385422cb55ec535015e1dc 158 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 150 158 - T 13-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 Y11_00221 e79b532145385422cb55ec535015e1dc 158 Pfam PF13505 Outer membrane protein beta-barrel domain 6 158 9.1E-30 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel Y11_00221 e79b532145385422cb55ec535015e1dc 158 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 31 39 - T 13-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 Y11_00221 e79b532145385422cb55ec535015e1dc 158 SUPERFAMILY SSF56925 9 158 1.1E-31 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Y11_00221 e79b532145385422cb55ec535015e1dc 158 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 30 42 1.4E-35 T 13-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 Y11_00221 e79b532145385422cb55ec535015e1dc 158 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 119 140 1.4E-35 T 13-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 Y11_00221 e79b532145385422cb55ec535015e1dc 158 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 73 96 1.4E-35 T 13-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 Y11_00221 e79b532145385422cb55ec535015e1dc 158 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 146 157 1.4E-35 T 13-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 Y11_00221 e79b532145385422cb55ec535015e1dc 158 Gene3D G3DSA:2.40.160.20 4 158 2.2E-58 T 13-10-2018 Y11_25171 24acc4c1a3d903baaea3d621783316e4 810 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 200 549 3.0E-88 T 13-10-2018 IPR010090 Phage tail tape measure protein Y11_25171 24acc4c1a3d903baaea3d621783316e4 810 Pfam PF10145 Phage-related minor tail protein 240 440 5.9E-49 T 13-10-2018 IPR010090 Phage tail tape measure protein Y11_42271 6ac2c4d230015237eb728dd0ae36fda8 248 SUPERFAMILY SSF53335 16 201 9.71E-32 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_42271 6ac2c4d230015237eb728dd0ae36fda8 248 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 122 128 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Y11_42271 6ac2c4d230015237eb728dd0ae36fda8 248 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 149 173 4.0E-5 T 13-10-2018 Y11_42271 6ac2c4d230015237eb728dd0ae36fda8 248 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 119 131 4.0E-5 T 13-10-2018 Y11_42271 6ac2c4d230015237eb728dd0ae36fda8 248 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 51 65 4.0E-5 T 13-10-2018 Y11_42271 6ac2c4d230015237eb728dd0ae36fda8 248 Pfam PF05175 Methyltransferase small domain 42 177 7.7E-15 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Y11_42271 6ac2c4d230015237eb728dd0ae36fda8 248 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 14 248 55.49 T 13-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 Y11_42271 6ac2c4d230015237eb728dd0ae36fda8 248 Gene3D G3DSA:3.40.50.150 14 244 2.2E-57 T 13-10-2018 Y11_29141 5cfe3b9ee5550550cb5fae586f744391 565 SMART SM00532 34 433 1.9E-45 T 13-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Y11_29141 5cfe3b9ee5550550cb5fae586f744391 565 Hamap MF_01587 DNA ligase B [ligB]. 4 561 53.478 T 13-10-2018 IPR020923 DNA ligase B GO:0003911|GO:0006259 Y11_29141 5cfe3b9ee5550550cb5fae586f744391 565 SUPERFAMILY SSF47781 403 559 3.78E-25 T 13-10-2018 IPR010994 RuvA domain 2-like Y11_29141 5cfe3b9ee5550550cb5fae586f744391 565 SUPERFAMILY SSF50249 315 395 5.82E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_29141 5cfe3b9ee5550550cb5fae586f744391 565 SUPERFAMILY SSF56091 30 312 1.6E-67 T 13-10-2018 Y11_29141 5cfe3b9ee5550550cb5fae586f744391 565 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 318 393 5.9E-17 T 13-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Y11_29141 5cfe3b9ee5550550cb5fae586f744391 565 Gene3D G3DSA:2.40.50.140 315 386 2.2E-12 T 13-10-2018 Y11_29141 5cfe3b9ee5550550cb5fae586f744391 565 Gene3D G3DSA:3.30.470.90 95 314 8.9E-31 T 13-10-2018 Y11_29141 5cfe3b9ee5550550cb5fae586f744391 565 Gene3D G3DSA:1.10.150.20 435 493 1.5E-5 T 13-10-2018 Y11_29141 5cfe3b9ee5550550cb5fae586f744391 565 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 124 313 2.1E-20 T 13-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Y11_10001 e0c50fae7a52b56da9d678ec512ee460 125 Gene3D G3DSA:3.40.50.2300 1 125 1.9E-23 T 13-10-2018 Y11_10001 e0c50fae7a52b56da9d678ec512ee460 125 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 2 103 5.9E-19 T 13-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain Y11_10001 e0c50fae7a52b56da9d678ec512ee460 125 SUPERFAMILY SSF53822 2 124 1.11E-20 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_08321 5781fc4baccf3a3baa3a8a3bf0f42448 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 13-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_08321 5781fc4baccf3a3baa3a8a3bf0f42448 192 PIRSF PIRSF000349 1 192 1.8E-86 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_08321 5781fc4baccf3a3baa3a8a3bf0f42448 192 SUPERFAMILY SSF54719 82 191 1.96E-44 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_08321 5781fc4baccf3a3baa3a8a3bf0f42448 192 Gene3D G3DSA:2.40.500.20 83 192 1.4E-44 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_08321 5781fc4baccf3a3baa3a8a3bf0f42448 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.6E-22 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_08321 5781fc4baccf3a3baa3a8a3bf0f42448 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 3.6E-22 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_08321 5781fc4baccf3a3baa3a8a3bf0f42448 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 3.6E-22 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_08321 5781fc4baccf3a3baa3a8a3bf0f42448 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.6E-22 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_08321 5781fc4baccf3a3baa3a8a3bf0f42448 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 3.6E-22 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_08321 5781fc4baccf3a3baa3a8a3bf0f42448 192 Gene3D G3DSA:1.10.287.990 20 82 3.8E-26 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_08321 5781fc4baccf3a3baa3a8a3bf0f42448 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 8.3E-41 T 13-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_08321 5781fc4baccf3a3baa3a8a3bf0f42448 192 SUPERFAMILY SSF46609 1 84 2.88E-35 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_08321 5781fc4baccf3a3baa3a8a3bf0f42448 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 1.8E-34 T 13-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_05271 f9840860c37a072fb5986e957bd2d561 309 Gene3D G3DSA:3.40.366.10 6 286 3.2E-108 T 13-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Y11_05271 f9840860c37a072fb5986e957bd2d561 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 6.1E-129 T 13-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Y11_05271 f9840860c37a072fb5986e957bd2d561 309 Pfam PF00698 Acyl transferase domain 7 293 1.1E-35 T 13-10-2018 IPR014043 Acyl transferase Y11_05271 f9840860c37a072fb5986e957bd2d561 309 Gene3D G3DSA:3.30.70.250 125 197 3.2E-108 T 13-10-2018 Y11_05271 f9840860c37a072fb5986e957bd2d561 309 SUPERFAMILY SSF55048 128 197 1.07E-17 T 13-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Y11_05271 f9840860c37a072fb5986e957bd2d561 309 SUPERFAMILY SSF52151 4 307 1.41E-80 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Y11_05271 f9840860c37a072fb5986e957bd2d561 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 309 7.6E-41 T 13-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Y11_05271 f9840860c37a072fb5986e957bd2d561 309 PIRSF PIRSF000446 1 309 2.2E-137 T 13-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Y11_30211 be614c0dfe454a4ba23a346401ef3de2 553 Pfam PF02080 TrkA-C domain 293 358 1.0E-8 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Y11_30211 be614c0dfe454a4ba23a346401ef3de2 553 SUPERFAMILY SSF116726 290 359 1.1E-11 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_30211 be614c0dfe454a4ba23a346401ef3de2 553 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 553 55.569 T 13-10-2018 IPR023018 Transport protein YidE, putative Y11_30211 be614c0dfe454a4ba23a346401ef3de2 553 Pfam PF06826 Predicted Permease Membrane Region 374 546 1.1E-45 T 13-10-2018 IPR006512 YidE/YbjL duplication Y11_30211 be614c0dfe454a4ba23a346401ef3de2 553 Pfam PF06826 Predicted Permease Membrane Region 10 179 3.3E-46 T 13-10-2018 IPR006512 YidE/YbjL duplication Y11_30211 be614c0dfe454a4ba23a346401ef3de2 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 1.2E-43 T 13-10-2018 IPR006512 YidE/YbjL duplication Y11_30211 be614c0dfe454a4ba23a346401ef3de2 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 2.8E-49 T 13-10-2018 IPR006512 YidE/YbjL duplication Y11_30211 be614c0dfe454a4ba23a346401ef3de2 553 Gene3D G3DSA:3.30.70.1450 198 274 2.6E-8 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_30211 be614c0dfe454a4ba23a346401ef3de2 553 SUPERFAMILY SSF116726 206 271 4.45E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_30211 be614c0dfe454a4ba23a346401ef3de2 553 Gene3D G3DSA:3.30.70.1450 289 364 2.7E-10 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_26281 aa71bb98e14c843218c5fc222f9cb0b0 166 Pfam PF04386 Stringent starvation protein B 4 166 1.4E-41 T 13-10-2018 IPR007481 Stringent starvation protein B Y11_26281 aa71bb98e14c843218c5fc222f9cb0b0 166 PIRSF PIRSF005276 1 166 2.5E-59 T 13-10-2018 IPR007481 Stringent starvation protein B Y11_26281 aa71bb98e14c843218c5fc222f9cb0b0 166 SUPERFAMILY SSF101738 1 108 2.49E-47 T 13-10-2018 IPR036760 SspB-like superfamily Y11_26281 aa71bb98e14c843218c5fc222f9cb0b0 166 Gene3D G3DSA:2.30.30.220 1 128 8.1E-52 T 13-10-2018 IPR036760 SspB-like superfamily Y11_32681 be86384414a1ac52dc0cf32430e65093 323 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 80 301 2.1E-13 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Y11_32681 be86384414a1ac52dc0cf32430e65093 323 Gene3D G3DSA:3.40.50.2000 170 323 1.4E-20 T 13-10-2018 Y11_32681 be86384414a1ac52dc0cf32430e65093 323 SUPERFAMILY SSF53756 2 323 3.85E-57 T 13-10-2018 Y11_32681 be86384414a1ac52dc0cf32430e65093 323 Gene3D G3DSA:3.40.50.2000 1 165 2.5E-22 T 13-10-2018 Y11_17851 eb0008c9659028469decb480c6b8c3af 301 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 29 282 1.3E-77 T 13-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 Y11_17851 eb0008c9659028469decb480c6b8c3af 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 272 2.3E-7 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_17851 eb0008c9659028469decb480c6b8c3af 301 SUPERFAMILY SSF161098 85 274 3.76E-26 T 13-10-2018 IPR035906 MetI-like superfamily Y11_17851 eb0008c9659028469decb480c6b8c3af 301 Gene3D G3DSA:1.10.3720.10 81 282 1.4E-23 T 13-10-2018 IPR035906 MetI-like superfamily Y11_41441 d4839deb4f4f1c4923e4634f8b0889a7 274 Pfam PF01548 Transposase 17 87 1.1E-10 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_41441 d4839deb4f4f1c4923e4634f8b0889a7 274 Pfam PF02371 Transposase IS116/IS110/IS902 family 150 226 8.6E-22 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_01001 00b3d6e410159664fa4eea8a394f9387 174 Pfam PF01292 Prokaryotic cytochrome b561 4 173 4.8E-21 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Y11_01001 00b3d6e410159664fa4eea8a394f9387 174 SUPERFAMILY SSF81342 3 174 5.1E-28 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Y11_00271 d29af643e6884200d9d6e5c6256e9de9 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 3.6E-178 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Y11_00271 d29af643e6884200d9d6e5c6256e9de9 375 Pfam PF07687 Peptidase dimerisation domain 175 282 4.5E-24 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain Y11_00271 d29af643e6884200d9d6e5c6256e9de9 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.325 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Y11_00271 d29af643e6884200d9d6e5c6256e9de9 375 Gene3D G3DSA:3.30.70.360 179 292 7.8E-126 T 13-10-2018 Y11_00271 d29af643e6884200d9d6e5c6256e9de9 375 Gene3D G3DSA:3.40.630.10 8 360 7.8E-126 T 13-10-2018 Y11_00271 d29af643e6884200d9d6e5c6256e9de9 375 SUPERFAMILY SSF53187 5 373 3.93E-64 T 13-10-2018 Y11_00271 d29af643e6884200d9d6e5c6256e9de9 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 7.7E-43 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 Y11_00271 d29af643e6884200d9d6e5c6256e9de9 375 SUPERFAMILY SSF55031 179 286 7.18E-28 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Y11_00271 d29af643e6884200d9d6e5c6256e9de9 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Y11_15411 6bf79d5099e0ca6a08ec0617e42a1c12 525 SUPERFAMILY SSF55874 386 505 9.04E-19 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_15411 6bf79d5099e0ca6a08ec0617e42a1c12 525 SMART SM00387 418 508 2.4E-6 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_15411 6bf79d5099e0ca6a08ec0617e42a1c12 525 Pfam PF07730 Histidine kinase 315 379 4.0E-14 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Y11_15411 6bf79d5099e0ca6a08ec0617e42a1c12 525 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 506 6.2E-7 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_15411 6bf79d5099e0ca6a08ec0617e42a1c12 525 Gene3D G3DSA:3.30.565.10 381 506 1.4E-25 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_15411 6bf79d5099e0ca6a08ec0617e42a1c12 525 Pfam PF05231 MASE1 9 280 1.5E-34 T 13-10-2018 IPR007895 MASE1 Y11_18481 53ee443c197ce566ab3862f7e80c057d 389 Gene3D G3DSA:3.30.1150.10 311 383 8.8E-35 T 13-10-2018 Y11_18481 53ee443c197ce566ab3862f7e80c057d 389 TIGRFAM TIGR02794 tolA_full: protein TolA 13 388 6.6E-99 T 13-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 Y11_18481 53ee443c197ce566ab3862f7e80c057d 389 SUPERFAMILY SSF74653 303 389 9.02E-21 T 13-10-2018 Y11_18481 53ee443c197ce566ab3862f7e80c057d 389 Pfam PF06519 TolA C-terminal 294 386 2.2E-35 T 13-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 Y11_33121 4b9d9ab2444a10a15a888f84a80fffbc 330 SMART SM00662 23 234 1.4E-105 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_33121 4b9d9ab2444a10a15a888f84a80fffbc 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.7E-23 T 13-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_33121 4b9d9ab2444a10a15a888f84a80fffbc 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_33121 4b9d9ab2444a10a15a888f84a80fffbc 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 7.5E-24 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_33121 4b9d9ab2444a10a15a888f84a80fffbc 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 5.9E-113 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_33121 4b9d9ab2444a10a15a888f84a80fffbc 330 Gene3D G3DSA:2.170.120.12 53 177 4.2E-86 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_33121 4b9d9ab2444a10a15a888f84a80fffbc 330 SUPERFAMILY SSF47789 251 325 1.26E-25 T 13-10-2018 Y11_33121 4b9d9ab2444a10a15a888f84a80fffbc 330 SUPERFAMILY SSF55257 6 231 1.57E-30 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_33121 4b9d9ab2444a10a15a888f84a80fffbc 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.627 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_33121 4b9d9ab2444a10a15a888f84a80fffbc 330 SUPERFAMILY SSF56553 53 178 2.09E-41 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_33121 4b9d9ab2444a10a15a888f84a80fffbc 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 328 7.0E-36 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_33121 4b9d9ab2444a10a15a888f84a80fffbc 330 Gene3D G3DSA:3.30.1360.10 17 228 4.2E-86 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_33121 4b9d9ab2444a10a15a888f84a80fffbc 330 Gene3D G3DSA:1.10.150.20 244 329 1.1E-38 T 13-10-2018 Y11_16531 7748fe96d966189e2cd7a9b1a4132c82 441 SUPERFAMILY SSF53720 10 430 4.9E-86 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Y11_16531 7748fe96d966189e2cd7a9b1a4132c82 441 PRINTS PR00083 Histidinol dehydrogenase signature 112 139 8.6E-100 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Y11_16531 7748fe96d966189e2cd7a9b1a4132c82 441 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 8.6E-100 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Y11_16531 7748fe96d966189e2cd7a9b1a4132c82 441 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 8.6E-100 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Y11_16531 7748fe96d966189e2cd7a9b1a4132c82 441 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 8.6E-100 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Y11_16531 7748fe96d966189e2cd7a9b1a4132c82 441 PRINTS PR00083 Histidinol dehydrogenase signature 364 382 8.6E-100 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Y11_16531 7748fe96d966189e2cd7a9b1a4132c82 441 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 8.6E-100 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Y11_16531 7748fe96d966189e2cd7a9b1a4132c82 441 PRINTS PR00083 Histidinol dehydrogenase signature 323 348 8.6E-100 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Y11_16531 7748fe96d966189e2cd7a9b1a4132c82 441 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 8.6E-100 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Y11_16531 7748fe96d966189e2cd7a9b1a4132c82 441 PIRSF PIRSF000099 3 433 2.3E-167 T 13-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Y11_16531 7748fe96d966189e2cd7a9b1a4132c82 441 Pfam PF00815 Histidinol dehydrogenase 31 430 1.9E-164 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Y11_16531 7748fe96d966189e2cd7a9b1a4132c82 441 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 10 430 40.799 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Y11_16531 7748fe96d966189e2cd7a9b1a4132c82 441 Gene3D G3DSA:3.40.50.1980 237 352 2.7E-121 T 13-10-2018 Y11_16531 7748fe96d966189e2cd7a9b1a4132c82 441 Gene3D G3DSA:3.40.50.1980 36 235 2.7E-121 T 13-10-2018 Y11_16531 7748fe96d966189e2cd7a9b1a4132c82 441 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 429 3.0E-159 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Y11_16531 7748fe96d966189e2cd7a9b1a4132c82 441 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 13-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 Y11_25801 774881c8710587b6c04e9b32aecaaaf8 418 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 4.3E-13 T 13-10-2018 Y11_25801 774881c8710587b6c04e9b32aecaaaf8 418 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 4.3E-13 T 13-10-2018 Y11_25801 774881c8710587b6c04e9b32aecaaaf8 418 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 4.3E-13 T 13-10-2018 Y11_25801 774881c8710587b6c04e9b32aecaaaf8 418 PRINTS PR00173 Glutamate-aspartate symporter signature 351 371 4.3E-13 T 13-10-2018 Y11_25801 774881c8710587b6c04e9b32aecaaaf8 418 PRINTS PR00173 Glutamate-aspartate symporter signature 25 45 4.3E-13 T 13-10-2018 Y11_25801 774881c8710587b6c04e9b32aecaaaf8 418 Gene3D G3DSA:1.10.3860.10 11 404 2.8E-70 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Y11_25801 774881c8710587b6c04e9b32aecaaaf8 418 SUPERFAMILY SSF118215 17 399 7.59E-94 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Y11_25801 774881c8710587b6c04e9b32aecaaaf8 418 Pfam PF00375 Sodium:dicarboxylate symporter family 17 397 2.6E-63 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Y11_25801 774881c8710587b6c04e9b32aecaaaf8 418 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 36.102 T 13-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 Y11_07191 7d94322d6ec480590f3703cdfbcc5a18 200 Pfam PF14834 Glutathione S-transferase, C-terminal domain 84 200 2.2E-51 T 13-10-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|KEGG: 00983+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 Y11_07191 7d94322d6ec480590f3703cdfbcc5a18 200 Gene3D G3DSA:3.40.30.10 2 194 8.1E-81 T 13-10-2018 Y11_07191 7d94322d6ec480590f3703cdfbcc5a18 200 Gene3D G3DSA:1.20.1050.10 79 187 8.1E-81 T 13-10-2018 Y11_07191 7d94322d6ec480590f3703cdfbcc5a18 200 SUPERFAMILY SSF52833 4 102 1.12E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_07191 7d94322d6ec480590f3703cdfbcc5a18 200 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 75 1.2E-12 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Y11_07191 7d94322d6ec480590f3703cdfbcc5a18 200 SUPERFAMILY SSF47616 80 198 1.19E-11 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Y11_29151 f1a6fb4d924a15ad5f5a4663f5f9be65 207 SUPERFAMILY SSF52540 3 189 1.64E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_29151 f1a6fb4d924a15ad5f5a4663f5f9be65 207 Gene3D G3DSA:3.30.63.10 37 96 1.0E-74 T 13-10-2018 Y11_29151 f1a6fb4d924a15ad5f5a4663f5f9be65 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.47 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Y11_29151 f1a6fb4d924a15ad5f5a4663f5f9be65 207 Pfam PF00625 Guanylate kinase 5 186 1.4E-67 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Y11_29151 f1a6fb4d924a15ad5f5a4663f5f9be65 207 Gene3D G3DSA:3.40.50.300 8 183 1.0E-74 T 13-10-2018 Y11_29151 f1a6fb4d924a15ad5f5a4663f5f9be65 207 SMART SM00072 3 187 4.7E-81 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Y11_29151 f1a6fb4d924a15ad5f5a4663f5f9be65 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 13-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 Y11_29151 f1a6fb4d924a15ad5f5a4663f5f9be65 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 3.6E-75 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 Pfam PF08447 PAS fold 42 129 5.1E-14 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 Pfam PF13185 GAF domain 282 425 3.9E-11 T 13-10-2018 IPR003018 GAF domain GO:0005515 Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 Gene3D G3DSA:3.20.20.450 584 836 7.4E-89 T 13-10-2018 IPR035919 EAL domain superfamily Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 SMART SM00091 147 219 0.019 T 13-10-2018 IPR000014 PAS domain Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 SMART SM00091 18 88 1.2E-4 T 13-10-2018 IPR000014 PAS domain Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 Gene3D G3DSA:3.30.70.270 494 583 1.7E-19 T 13-10-2018 Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 Pfam PF00990 Diguanylate cyclase, GGDEF domain 437 498 5.6E-17 T 13-10-2018 IPR000160 GGDEF domain Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 SMART SM00086 223 264 45.0 T 13-10-2018 IPR001610 PAC motif Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 SMART SM00086 93 135 0.12 T 13-10-2018 IPR001610 PAC motif Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 Gene3D G3DSA:3.30.70.270 430 493 2.0E-20 T 13-10-2018 Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 SMART SM00052 581 827 2.1E-101 T 13-10-2018 IPR001633 EAL domain Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 PIRSF PIRSF005925 136 496 2.7E-96 T 13-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 PIRSF PIRSF005925 489 838 5.2E-137 T 13-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 PIRSF PIRSF005925 10 147 1.2E-5 T 13-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 SUPERFAMILY SSF55785 30 132 1.47E-23 T 13-10-2018 IPR035965 PAS domain superfamily Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 Pfam PF00563 EAL domain 587 821 7.9E-68 T 13-10-2018 IPR001633 EAL domain Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 Gene3D G3DSA:3.30.450.40 286 429 4.6E-18 T 13-10-2018 IPR029016 GAF-like domain superfamily Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 SMART SM00065 266 434 9.3E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 SUPERFAMILY SSF55073 442 572 2.35E-32 T 13-10-2018 IPR029787 Nucleotide cyclase Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 Gene3D G3DSA:3.30.450.20 7 144 3.6E-22 T 13-10-2018 Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 SMART SM00267 426 571 8.5E-30 T 13-10-2018 IPR000160 GGDEF domain Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 SUPERFAMILY SSF141868 586 834 1.96E-79 T 13-10-2018 IPR035919 EAL domain superfamily Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 433 496 7.0E-16 T 13-10-2018 IPR000160 GGDEF domain Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 SUPERFAMILY SSF55785 171 262 2.09E-13 T 13-10-2018 IPR035965 PAS domain superfamily Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 SUPERFAMILY SSF55781 284 437 2.03E-20 T 13-10-2018 Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 25 141 5.3E-18 T 13-10-2018 IPR000014 PAS domain Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 268 3.2E-10 T 13-10-2018 IPR000014 PAS domain Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 Pfam PF13426 PAS domain 159 262 6.1E-9 T 13-10-2018 IPR000014 PAS domain Y11_11391 0455b686d002dd785688a9b4f0e14f56 838 Gene3D G3DSA:3.30.450.20 145 285 8.1E-18 T 13-10-2018 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 SUPERFAMILY SSF54980 411 488 1.73E-25 T 13-10-2018 IPR035647 EF-G domain III/V-like Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 Pfam PF00679 Elongation factor G C-terminus 609 694 2.0E-31 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 Gene3D G3DSA:3.40.50.300 1 303 3.9E-116 T 13-10-2018 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 SUPERFAMILY SSF54980 612 697 2.27E-29 T 13-10-2018 IPR035647 EF-G domain III/V-like Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 Pfam PF03764 Elongation factor G, domain IV 486 607 1.9E-48 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 Pfam PF14492 Elongation Factor G, domain II 411 485 9.8E-34 T 13-10-2018 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 SUPERFAMILY SSF52540 6 287 3.24E-106 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 SUPERFAMILY SSF50447 271 411 3.98E-35 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 SUPERFAMILY SSF54211 486 608 2.48E-42 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 Gene3D G3DSA:3.30.230.10 491 695 5.2E-89 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 Pfam PF03144 Elongation factor Tu domain 2 331 398 9.7E-17 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 113.655 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 Gene3D G3DSA:3.30.70.870 412 487 1.3E-32 T 13-10-2018 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 SMART SM00889 487 607 3.6E-75 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 3.1E-32 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 SMART SM00838 609 696 2.3E-58 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 701 0.0 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 Gene3D G3DSA:3.30.70.240 613 683 5.2E-89 T 13-10-2018 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 4.6E-67 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 Gene3D G3DSA:2.40.30.10 304 411 3.5E-44 T 13-10-2018 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_32831 bd4c634683b7b318f1fb0a7b027f56d1 702 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 SUPERFAMILY SSF52374 5 668 1.6E-139 T 13-10-2018 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 1.0E-51 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 1.0E-51 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 1.0E-51 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 1.0E-51 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 1.0E-51 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 1.0E-51 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 1.0E-51 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 Pfam PF08264 Anticodon-binding domain of tRNA 701 822 2.2E-16 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 Gene3D G3DSA:3.10.330.110 567 628 0.0 T 13-10-2018 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 2.7E-78 T 13-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 SUPERFAMILY SSF47323 662 859 5.61E-38 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 Gene3D G3DSA:3.10.20.590 799 860 2.9E-25 T 13-10-2018 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 Gene3D G3DSA:3.40.50.620 33 566 0.0 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 Gene3D G3DSA:1.10.730.10 8 791 0.0 T 13-10-2018 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.382 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 571 1.0E-5 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 652 2.8E-7 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 171 1.5E-25 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 SUPERFAMILY SSF50677 226 415 2.72E-57 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Y11_19181 fb713b475303e3539aef7fea6f2903f4 860 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Y11_22051 94dd18918d7e8623da3f51b8c5ef3910 246 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 246 120.456 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Y11_22051 94dd18918d7e8623da3f51b8c5ef3910 246 Gene3D G3DSA:3.40.1280.10 1 160 8.3E-68 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Y11_22051 94dd18918d7e8623da3f51b8c5ef3910 246 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 7.8E-71 T 13-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Y11_22051 94dd18918d7e8623da3f51b8c5ef3910 246 SUPERFAMILY SSF75217 1 244 1.5E-102 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Y11_22051 94dd18918d7e8623da3f51b8c5ef3910 246 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 233 3.5E-111 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Y11_22051 94dd18918d7e8623da3f51b8c5ef3910 246 Gene3D G3DSA:1.10.1270.20 161 246 4.9E-36 T 13-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Y11_22051 94dd18918d7e8623da3f51b8c5ef3910 246 PIRSF PIRSF000386 1 245 2.1E-102 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Y11_40001 e7adf76bd5339d24ccba0df9541ae234 88 SUPERFAMILY SSF109910 2 78 6.54E-28 T 13-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily Y11_40001 e7adf76bd5339d24ccba0df9541ae234 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 3.1E-26 T 13-10-2018 IPR005631 Flavinator of succinate dehydrogenase Y11_40001 e7adf76bd5339d24ccba0df9541ae234 88 Gene3D G3DSA:1.10.150.250 1 88 1.1E-39 T 13-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily Y11_31031 0d9c7fa54e97eecac21c995cd24db805 443 SUPERFAMILY SSF103473 21 434 2.35E-81 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_31031 0d9c7fa54e97eecac21c995cd24db805 443 PIRSF PIRSF002808 6 443 3.7E-143 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 Y11_31031 0d9c7fa54e97eecac21c995cd24db805 443 Gene3D G3DSA:1.20.1250.20 19 223 5.4E-51 T 13-10-2018 Y11_31031 0d9c7fa54e97eecac21c995cd24db805 443 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 1.8E-143 T 13-10-2018 Y11_31031 0d9c7fa54e97eecac21c995cd24db805 443 Pfam PF07690 Major Facilitator Superfamily 36 396 1.3E-49 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_31031 0d9c7fa54e97eecac21c995cd24db805 443 Gene3D G3DSA:1.20.1250.20 237 439 1.6E-46 T 13-10-2018 Y11_35621 bf26a7562e80f312bb2eeed42d29b439 84 Gene3D G3DSA:3.30.2310.20 1 84 3.7E-41 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Y11_35621 bf26a7562e80f312bb2eeed42d29b439 84 SUPERFAMILY SSF143011 3 83 2.09E-28 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Y11_35621 bf26a7562e80f312bb2eeed42d29b439 84 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 1.5E-41 T 13-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 Y11_35621 bf26a7562e80f312bb2eeed42d29b439 84 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 2.2E-37 T 13-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 Y11_39571 6e4a5c9c555b0da2501b1a6b54d0d155 151 SUPERFAMILY SSF57716 111 149 5.7E-10 T 13-10-2018 Y11_39571 6e4a5c9c555b0da2501b1a6b54d0d155 151 Gene3D G3DSA:1.20.120.910 20 150 1.4E-35 T 13-10-2018 Y11_39571 6e4a5c9c555b0da2501b1a6b54d0d155 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 7.0E-51 T 13-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Y11_39571 6e4a5c9c555b0da2501b1a6b54d0d155 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 13-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Y11_39571 6e4a5c9c555b0da2501b1a6b54d0d155 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 13-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Y11_39571 6e4a5c9c555b0da2501b1a6b54d0d155 151 SUPERFAMILY SSF109635 9 110 2.88E-37 T 13-10-2018 IPR037187 DksA, N-terminal domain superfamily Y11_39571 6e4a5c9c555b0da2501b1a6b54d0d155 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 13-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Y11_39571 6e4a5c9c555b0da2501b1a6b54d0d155 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 111 143 3.1E-10 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Y11_39571 6e4a5c9c555b0da2501b1a6b54d0d155 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 29.866 T 13-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Y11_42761 133436b9674ee09e7af4e43c50465fb1 111 Gene3D G3DSA:3.10.20.30 1 111 1.4E-37 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Y11_42761 133436b9674ee09e7af4e43c50465fb1 111 SUPERFAMILY SSF54292 4 109 1.4E-35 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Y11_42761 133436b9674ee09e7af4e43c50465fb1 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 92 7.3E-16 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Y11_42761 133436b9674ee09e7af4e43c50465fb1 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 4.7E-62 T 13-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 Y11_42761 133436b9674ee09e7af4e43c50465fb1 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 13-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Y11_42761 133436b9674ee09e7af4e43c50465fb1 111 PRINTS PR00355 Adrenodoxin signature 42 52 5.4E-10 T 13-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Y11_42761 133436b9674ee09e7af4e43c50465fb1 111 PRINTS PR00355 Adrenodoxin signature 60 74 5.4E-10 T 13-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Y11_42761 133436b9674ee09e7af4e43c50465fb1 111 PRINTS PR00355 Adrenodoxin signature 83 91 5.4E-10 T 13-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Y11_21051 b8bc5f11c3d9a242b0e20a8832fd1609 1229 Gene3D G3DSA:3.40.50.300 975 1222 8.4E-27 T 13-10-2018 Y11_21051 b8bc5f11c3d9a242b0e20a8832fd1609 1229 SUPERFAMILY SSF52540 1 250 2.72E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_21051 b8bc5f11c3d9a242b0e20a8832fd1609 1229 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1111 1181 3.4E-15 T 13-10-2018 Y11_21051 b8bc5f11c3d9a242b0e20a8832fd1609 1229 SUPERFAMILY SSF52540 1010 1199 1.19E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_21051 b8bc5f11c3d9a242b0e20a8832fd1609 1229 Gene3D G3DSA:3.40.50.300 1 274 4.2E-46 T 13-10-2018 Y11_21051 b8bc5f11c3d9a242b0e20a8832fd1609 1229 Pfam PF13476 AAA domain 5 280 1.7E-22 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain Y11_37681 d20711f26160419ab834bbe7a85d2543 427 SUPERFAMILY SSF55909 13 425 1.8E-128 T 13-10-2018 Y11_37681 d20711f26160419ab834bbe7a85d2543 427 Pfam PF02274 Amidinotransferase 28 422 2.5E-110 T 13-10-2018 Y11_37681 d20711f26160419ab834bbe7a85d2543 427 Gene3D G3DSA:1.10.3930.10 78 164 7.9E-149 T 13-10-2018 Y11_37681 d20711f26160419ab834bbe7a85d2543 427 Gene3D G3DSA:3.75.10.10 16 422 7.9E-149 T 13-10-2018 Y11_37681 d20711f26160419ab834bbe7a85d2543 427 Hamap MF_00242 Arginine deiminase [arcA]. 11 425 46.583 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Y11_37681 d20711f26160419ab834bbe7a85d2543 427 TIGRFAM TIGR01078 arcA: arginine deiminase 16 425 2.4E-153 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Y11_37681 d20711f26160419ab834bbe7a85d2543 427 PRINTS PR01466 Bacterial arginine deiminase signature 361 378 8.2E-47 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Y11_37681 d20711f26160419ab834bbe7a85d2543 427 PRINTS PR01466 Bacterial arginine deiminase signature 12 32 8.2E-47 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Y11_37681 d20711f26160419ab834bbe7a85d2543 427 PRINTS PR01466 Bacterial arginine deiminase signature 193 208 8.2E-47 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Y11_37681 d20711f26160419ab834bbe7a85d2543 427 PRINTS PR01466 Bacterial arginine deiminase signature 165 183 8.2E-47 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Y11_37681 d20711f26160419ab834bbe7a85d2543 427 PRINTS PR01466 Bacterial arginine deiminase signature 404 422 8.2E-47 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Y11_37681 d20711f26160419ab834bbe7a85d2543 427 PRINTS PR01466 Bacterial arginine deiminase signature 381 395 8.2E-47 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Y11_37681 d20711f26160419ab834bbe7a85d2543 427 PIRSF PIRSF006356 1 425 1.9E-139 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Y11_18741 4c648faab17e56255854ab84ca50b7ac 481 Pfam PF00875 DNA photolyase 5 175 2.8E-41 T 13-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 Y11_18741 4c648faab17e56255854ab84ca50b7ac 481 Gene3D G3DSA:3.40.50.620 5 206 4.0E-79 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_18741 4c648faab17e56255854ab84ca50b7ac 481 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 347 366 - T 13-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal Y11_18741 4c648faab17e56255854ab84ca50b7ac 481 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 327 339 - T 13-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal Y11_18741 4c648faab17e56255854ab84ca50b7ac 481 SUPERFAMILY SSF52425 3 200 5.49E-54 T 13-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 Y11_18741 4c648faab17e56255854ab84ca50b7ac 481 Gene3D G3DSA:1.25.40.80 134 291 4.0E-79 T 13-10-2018 Y11_18741 4c648faab17e56255854ab84ca50b7ac 481 Gene3D G3DSA:1.10.579.10 295 477 6.0E-82 T 13-10-2018 Y11_18741 4c648faab17e56255854ab84ca50b7ac 481 Pfam PF03441 FAD binding domain of DNA photolyase 277 471 7.0E-81 T 13-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 Y11_18741 4c648faab17e56255854ab84ca50b7ac 481 PRINTS PR00147 DNA photolyase signature 386 400 2.5E-30 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Y11_18741 4c648faab17e56255854ab84ca50b7ac 481 PRINTS PR00147 DNA photolyase signature 347 365 2.5E-30 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Y11_18741 4c648faab17e56255854ab84ca50b7ac 481 PRINTS PR00147 DNA photolyase signature 145 161 2.5E-30 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Y11_18741 4c648faab17e56255854ab84ca50b7ac 481 PRINTS PR00147 DNA photolyase signature 327 343 2.5E-30 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Y11_18741 4c648faab17e56255854ab84ca50b7ac 481 SUPERFAMILY SSF48173 193 474 5.49E-108 T 13-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Y11_30051 9240acf8a3d6a0bb107ba66b40cbdf89 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 30 1.0E-10 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_30051 9240acf8a3d6a0bb107ba66b40cbdf89 46 Pfam PF00468 Ribosomal protein L34 1 44 3.9E-23 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_30051 9240acf8a3d6a0bb107ba66b40cbdf89 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.9E-26 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_30051 9240acf8a3d6a0bb107ba66b40cbdf89 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 13-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_30051 9240acf8a3d6a0bb107ba66b40cbdf89 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.553 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_22061 62be16fe07bd253be5bfb7cf9aa6d2f1 182 SUPERFAMILY SSF50447 13 100 1.17E-24 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Y11_22061 62be16fe07bd253be5bfb7cf9aa6d2f1 182 Gene3D G3DSA:2.40.30.60 6 100 3.1E-34 T 13-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Y11_22061 62be16fe07bd253be5bfb7cf9aa6d2f1 182 Pfam PF05239 PRC-barrel domain 103 177 4.0E-9 T 13-10-2018 IPR027275 PRC-barrel domain Y11_22061 62be16fe07bd253be5bfb7cf9aa6d2f1 182 Gene3D G3DSA:2.30.30.240 101 182 1.7E-31 T 13-10-2018 Y11_22061 62be16fe07bd253be5bfb7cf9aa6d2f1 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 1.2E-60 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Y11_22061 62be16fe07bd253be5bfb7cf9aa6d2f1 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.408 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Y11_22061 62be16fe07bd253be5bfb7cf9aa6d2f1 182 SUPERFAMILY SSF50346 106 182 2.94E-19 T 13-10-2018 IPR011033 PRC-barrel-like superfamily Y11_22061 62be16fe07bd253be5bfb7cf9aa6d2f1 182 Pfam PF01782 RimM N-terminal domain 16 96 2.2E-26 T 13-10-2018 IPR002676 RimM, N-terminal GO:0006364 Y11_37171 c57226229a4fddd6fde0e698a90f190f 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 13-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Y11_37171 c57226229a4fddd6fde0e698a90f190f 712 Gene3D G3DSA:3.20.70.20 121 687 3.7E-232 T 13-10-2018 Y11_37171 c57226229a4fddd6fde0e698a90f190f 712 Pfam PF03477 ATP cone domain 4 89 9.7E-19 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Y11_37171 c57226229a4fddd6fde0e698a90f190f 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 3.2E-205 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Y11_37171 c57226229a4fddd6fde0e698a90f190f 712 SUPERFAMILY SSF51998 121 687 4.88E-193 T 13-10-2018 Y11_37171 c57226229a4fddd6fde0e698a90f190f 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 5.0E-181 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Y11_09201 257c13a369d50e7dd7235c98b8994714 309 Hamap MF_01987 Ribokinase [rbsK]. 1 301 25.153 T 13-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 Y11_09201 257c13a369d50e7dd7235c98b8994714 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 3 297 1.3E-108 T 13-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 Y11_09201 257c13a369d50e7dd7235c98b8994714 309 SUPERFAMILY SSF53613 1 302 2.03E-82 T 13-10-2018 IPR029056 Ribokinase-like Y11_09201 257c13a369d50e7dd7235c98b8994714 309 Pfam PF00294 pfkB family carbohydrate kinase 2 294 8.2E-62 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Y11_09201 257c13a369d50e7dd7235c98b8994714 309 Gene3D G3DSA:3.40.1190.20 1 307 3.2E-98 T 13-10-2018 IPR029056 Ribokinase-like Y11_09201 257c13a369d50e7dd7235c98b8994714 309 PRINTS PR00990 Ribokinase signature 5 26 9.2E-29 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Y11_09201 257c13a369d50e7dd7235c98b8994714 309 PRINTS PR00990 Ribokinase signature 217 228 9.2E-29 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Y11_09201 257c13a369d50e7dd7235c98b8994714 309 PRINTS PR00990 Ribokinase signature 32 51 9.2E-29 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Y11_09201 257c13a369d50e7dd7235c98b8994714 309 PRINTS PR00990 Ribokinase signature 104 117 9.2E-29 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Y11_09201 257c13a369d50e7dd7235c98b8994714 309 PRINTS PR00990 Ribokinase signature 173 188 9.2E-29 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 Gene3D G3DSA:3.30.390.30 346 467 1.1E-45 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 Gene3D G3DSA:3.50.50.60 9 332 1.5E-124 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 Gene3D G3DSA:3.50.50.60 150 271 1.5E-124 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 SUPERFAMILY SSF51905 2 337 3.83E-57 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.2E-68 T 13-10-2018 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.2E-68 T 13-10-2018 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.2E-68 T 13-10-2018 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.2E-68 T 13-10-2018 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.2E-68 T 13-10-2018 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.2E-68 T 13-10-2018 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.2E-68 T 13-10-2018 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.2E-68 T 13-10-2018 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.2E-68 T 13-10-2018 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 SUPERFAMILY SSF55424 343 466 5.84E-39 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 PIRSF PIRSF000350 1 468 6.1E-86 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 2.6E-63 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.8E-35 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 458 2.2E-148 T 13-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 6.2E-41 T 13-10-2018 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 6.2E-41 T 13-10-2018 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 6.2E-41 T 13-10-2018 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.2E-41 T 13-10-2018 Y11_39321 17cdaf5f708fc3aee41a41873f17ce69 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 6.2E-41 T 13-10-2018 Y11_07881 34e232fd890b3151fd38a67a38674ae1 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_07881 34e232fd890b3151fd38a67a38674ae1 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_07881 34e232fd890b3151fd38a67a38674ae1 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_07881 34e232fd890b3151fd38a67a38674ae1 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_07881 34e232fd890b3151fd38a67a38674ae1 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 3.0E-14 T 13-10-2018 Y11_07881 34e232fd890b3151fd38a67a38674ae1 118 Pfam PF00453 Ribosomal protein L20 3 109 4.2E-49 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_07881 34e232fd890b3151fd38a67a38674ae1 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.795 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_07881 34e232fd890b3151fd38a67a38674ae1 118 SUPERFAMILY SSF74731 3 117 1.19E-50 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_07881 34e232fd890b3151fd38a67a38674ae1 118 Gene3D G3DSA:1.10.720.90 2 55 5.8E-25 T 13-10-2018 Y11_07881 34e232fd890b3151fd38a67a38674ae1 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.0E-52 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_07881 34e232fd890b3151fd38a67a38674ae1 118 Gene3D G3DSA:1.10.1900.20 56 118 1.4E-28 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_17461 296e747bac2a313166fee9feb923f9fb 258 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 257 43.574 T 13-10-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 Y11_17461 296e747bac2a313166fee9feb923f9fb 258 Gene3D G3DSA:3.40.50.150 9 254 3.4E-87 T 13-10-2018 Y11_17461 296e747bac2a313166fee9feb923f9fb 258 Pfam PF13649 Methyltransferase domain 36 121 5.0E-13 T 13-10-2018 Y11_17461 296e747bac2a313166fee9feb923f9fb 258 Gene3D G3DSA:1.10.150.290 132 237 3.4E-87 T 13-10-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 Y11_17461 296e747bac2a313166fee9feb923f9fb 258 SUPERFAMILY SSF53335 4 210 3.19E-31 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_29051 c200214985fd17f4d5d055aa1a5822c9 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.953 T 13-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Y11_29051 c200214985fd17f4d5d055aa1a5822c9 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 3.3E-67 T 13-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Y11_29051 c200214985fd17f4d5d055aa1a5822c9 213 Gene3D G3DSA:3.40.50.2020 1 213 3.1E-78 T 13-10-2018 Y11_29051 c200214985fd17f4d5d055aa1a5822c9 213 SUPERFAMILY SSF53271 2 212 4.12E-50 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Y11_29051 c200214985fd17f4d5d055aa1a5822c9 213 Pfam PF00156 Phosphoribosyl transferase domain 49 159 2.6E-12 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 PIRSF PIRSF037149 1 834 0.0 T 13-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 SUPERFAMILY SSF56014 632 808 1.7E-45 T 13-10-2018 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 559 621 8.2E-12 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 SUPERFAMILY SSF51905 144 310 3.29E-29 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 Gene3D G3DSA:3.50.50.60 8 283 3.8E-83 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 Gene3D G3DSA:3.50.50.60 110 246 3.8E-83 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 Gene3D G3DSA:3.30.413.10 631 783 3.0E-30 T 13-10-2018 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 756 1.2E-14 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 PRINTS PR00397 Sirohaem Fe-binding site signature 678 696 1.0E-5 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 PRINTS PR00397 Sirohaem Fe-binding site signature 635 653 1.0E-5 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 4.2E-11 T 13-10-2018 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 4.2E-11 T 13-10-2018 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 4.2E-11 T 13-10-2018 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 4.2E-11 T 13-10-2018 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 Gene3D G3DSA:1.10.10.1100 422 476 2.8E-12 T 13-10-2018 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 6.3E-14 T 13-10-2018 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 6.3E-14 T 13-10-2018 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 6.3E-14 T 13-10-2018 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 6.3E-14 T 13-10-2018 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 470 5.5E-15 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 SUPERFAMILY SSF51905 2 189 8.55E-39 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 SUPERFAMILY SSF55124 501 626 2.33E-32 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 678 694 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 13-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 Y11_32431 3a55ce28ada5aaf2ab5cb246856eb92b 848 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 285 1.9E-52 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Y11_p0711 a6a3e73d13d58b5faf23313a70f0f85a 354 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 8.2E-147 T 13-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 Y11_p0711 a6a3e73d13d58b5faf23313a70f0f85a 354 SUPERFAMILY SSF160544 238 343 7.32E-31 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Y11_p0711 a6a3e73d13d58b5faf23313a70f0f85a 354 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 340 4.0E-112 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_p0711 a6a3e73d13d58b5faf23313a70f0f85a 354 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 2.0E-46 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_p0711 a6a3e73d13d58b5faf23313a70f0f85a 354 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 2.0E-46 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_p0711 a6a3e73d13d58b5faf23313a70f0f85a 354 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 2.0E-46 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_p0711 a6a3e73d13d58b5faf23313a70f0f85a 354 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 2.0E-46 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_p0711 a6a3e73d13d58b5faf23313a70f0f85a 354 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 2.0E-46 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_p0711 a6a3e73d13d58b5faf23313a70f0f85a 354 Gene3D G3DSA:3.40.1690.10 211 354 5.4E-54 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Y11_21561 447154f5024cc0a52056e2167a7a784d 399 PIRSF PIRSF031134 1 399 5.2E-165 T 13-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 Y11_21561 447154f5024cc0a52056e2167a7a784d 399 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 399 211.583 T 13-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 Y11_21561 447154f5024cc0a52056e2167a7a784d 399 Gene3D G3DSA:3.90.1200.10 116 398 7.7E-101 T 13-10-2018 Y11_21561 447154f5024cc0a52056e2167a7a784d 399 Gene3D G3DSA:3.30.200.20 1 115 3.0E-38 T 13-10-2018 Y11_21561 447154f5024cc0a52056e2167a7a784d 399 SUPERFAMILY SSF56112 1 397 1.9E-89 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Y11_21561 447154f5024cc0a52056e2167a7a784d 399 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 33 395 1.2E-158 T 13-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 Y11_21561 447154f5024cc0a52056e2167a7a784d 399 Pfam PF01636 Phosphotransferase enzyme family 33 263 1.3E-12 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase Y11_42181 74f84080982381a05cacaaf5de002ddd 228 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 4.0E-89 T 13-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Y11_42181 74f84080982381a05cacaaf5de002ddd 228 Gene3D G3DSA:3.40.470.10 2 228 2.4E-107 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Y11_42181 74f84080982381a05cacaaf5de002ddd 228 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 13-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Y11_42181 74f84080982381a05cacaaf5de002ddd 228 SMART SM00987 49 210 3.3E-42 T 13-10-2018 Y11_42181 74f84080982381a05cacaaf5de002ddd 228 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.543 T 13-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Y11_42181 74f84080982381a05cacaaf5de002ddd 228 SUPERFAMILY SSF52141 6 221 4.58E-97 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Y11_42181 74f84080982381a05cacaaf5de002ddd 228 SMART SM00986 49 210 3.3E-42 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Y11_42181 74f84080982381a05cacaaf5de002ddd 228 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 1.7E-24 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Y11_00151 dffda22744aab5f6ff271fef7799a10d 211 Pfam PF02230 Phospholipase/Carboxylesterase 7 205 6.5E-33 T 13-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 Y11_00151 dffda22744aab5f6ff271fef7799a10d 211 Gene3D G3DSA:3.40.50.1820 1 206 6.4E-37 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_00151 dffda22744aab5f6ff271fef7799a10d 211 SUPERFAMILY SSF53474 8 204 5.95E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_37471 3477dad815af0e0e0e97cde7587fb2a5 252 Pfam PF00196 Bacterial regulatory proteins, luxR family 177 226 1.1E-7 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_37471 3477dad815af0e0e0e97cde7587fb2a5 252 SUPERFAMILY SSF46894 170 228 2.21E-12 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_37471 3477dad815af0e0e0e97cde7587fb2a5 252 Gene3D G3DSA:1.10.10.10 155 235 1.8E-9 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_37471 3477dad815af0e0e0e97cde7587fb2a5 252 Pfam PF08448 PAS fold 43 146 2.9E-5 T 13-10-2018 IPR013656 PAS fold-4 Y11_37471 3477dad815af0e0e0e97cde7587fb2a5 252 SMART SM00421 174 231 2.5E-4 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_33391 2cd8fdc174372369e641eeb1eba090a5 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 390 1.5E-89 T 13-10-2018 IPR000523 Magnesium chelatase ChlI domain Y11_33391 2cd8fdc174372369e641eeb1eba090a5 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 6.0E-29 T 13-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain Y11_33391 2cd8fdc174372369e641eeb1eba090a5 507 SUPERFAMILY SSF54211 9 169 6.07E-28 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_33391 2cd8fdc174372369e641eeb1eba090a5 507 SUPERFAMILY SSF52540 189 502 3.41E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_33391 2cd8fdc174372369e641eeb1eba090a5 507 Gene3D G3DSA:3.40.50.300 187 499 7.6E-57 T 13-10-2018 Y11_33391 2cd8fdc174372369e641eeb1eba090a5 507 SMART SM00382 210 390 1.6E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_33391 2cd8fdc174372369e641eeb1eba090a5 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 3.6E-7 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Y11_33391 2cd8fdc174372369e641eeb1eba090a5 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 3.6E-7 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Y11_33391 2cd8fdc174372369e641eeb1eba090a5 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 3.6E-7 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Y11_33391 2cd8fdc174372369e641eeb1eba090a5 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 3.6E-7 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Y11_33391 2cd8fdc174372369e641eeb1eba090a5 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 3.2E-44 T 13-10-2018 Y11_33391 2cd8fdc174372369e641eeb1eba090a5 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 9.0E-212 T 13-10-2018 IPR004482 Mg chelatase-related protein Y11_15171 737f010b226ec0aefda82caf4420c521 854 Pfam PF13953 PapC C-terminal domain 758 833 7.2E-17 T 13-10-2018 IPR025949 PapC-like, C-terminal domain Y11_15171 737f010b226ec0aefda82caf4420c521 854 Gene3D G3DSA:2.60.40.2610 664 754 1.6E-28 T 13-10-2018 Y11_15171 737f010b226ec0aefda82caf4420c521 854 Gene3D G3DSA:3.10.20.410 11 130 2.4E-26 T 13-10-2018 Y11_15171 737f010b226ec0aefda82caf4420c521 854 Gene3D G3DSA:2.60.40.2070 755 853 1.9E-15 T 13-10-2018 Y11_15171 737f010b226ec0aefda82caf4420c521 854 SUPERFAMILY SSF141729 11 128 8.63E-29 T 13-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 Y11_15171 737f010b226ec0aefda82caf4420c521 854 Pfam PF00577 Outer membrane usher protein 172 749 1.7E-137 T 13-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 Y11_15171 737f010b226ec0aefda82caf4420c521 854 Pfam PF13954 PapC N-terminal domain 14 153 8.8E-35 T 13-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 Y11_15171 737f010b226ec0aefda82caf4420c521 854 Gene3D G3DSA:2.60.40.3110 242 331 1.8E-35 T 13-10-2018 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 1.4E-70 T 13-10-2018 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 1.4E-70 T 13-10-2018 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.4E-70 T 13-10-2018 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 1.4E-70 T 13-10-2018 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 1.4E-70 T 13-10-2018 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.4E-70 T 13-10-2018 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 1.4E-70 T 13-10-2018 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.4E-70 T 13-10-2018 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 1.4E-70 T 13-10-2018 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 Gene3D G3DSA:3.40.50.670 706 802 2.3E-25 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 Gene3D G3DSA:3.40.50.670 398 572 2.6E-74 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 Pfam PF01751 Toprim domain 419 531 5.2E-18 T 13-10-2018 IPR006171 TOPRIM domain Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 SUPERFAMILY SSF55874 4 220 1.24E-77 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 SUPERFAMILY SSF54211 221 392 3.98E-62 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 SMART SM00433 35 797 1.8E-280 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 793 3.0E-29 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 4.6E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 4.6E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 4.6E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 4.6E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 4.6E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 4.6E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 4.6E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 4.6E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 4.6E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 4.6E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 Gene3D G3DSA:3.30.565.10 1 220 2.6E-97 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 Gene3D G3DSA:3.10.20.690 592 683 5.2E-38 T 13-10-2018 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 6.9E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 110.06 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 Pfam PF00204 DNA gyrase B 221 390 2.1E-59 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 Gene3D G3DSA:3.30.230.10 221 392 4.8E-75 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 SUPERFAMILY SSF56719 394 795 2.59E-86 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 SMART SM00387 31 175 3.3E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_30101 d1547417b50b47fe54b34bb771c04b24 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Y11_04011 b4e507b611da8a05d1050998b19fa283 203 Gene3D G3DSA:2.50.20.10 20 202 1.8E-54 T 13-10-2018 Y11_04011 b4e507b611da8a05d1050998b19fa283 203 SUPERFAMILY SSF89392 23 202 3.84E-56 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Y11_04011 b4e507b611da8a05d1050998b19fa283 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 9 201 31.722 T 13-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 Y11_04011 b4e507b611da8a05d1050998b19fa283 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 32 191 9.5E-59 T 13-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like Y11_04011 b4e507b611da8a05d1050998b19fa283 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 203 3.9E-98 T 13-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 Y11_15161 4ab6866b2ac3b1eb612e0f6bacff02cc 244 Gene3D G3DSA:2.60.40.10 28 150 2.5E-40 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_15161 4ab6866b2ac3b1eb612e0f6bacff02cc 244 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 150 1.4E-40 T 13-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Y11_15161 4ab6866b2ac3b1eb612e0f6bacff02cc 244 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 174 236 2.0E-13 T 13-10-2018 IPR016148 Pili assembly chaperone, C-terminal Y11_15161 4ab6866b2ac3b1eb612e0f6bacff02cc 244 PRINTS PR00969 Pili chaperone signature 27 36 1.6E-28 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_15161 4ab6866b2ac3b1eb612e0f6bacff02cc 244 PRINTS PR00969 Pili chaperone signature 76 97 1.6E-28 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_15161 4ab6866b2ac3b1eb612e0f6bacff02cc 244 PRINTS PR00969 Pili chaperone signature 169 184 1.6E-28 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_15161 4ab6866b2ac3b1eb612e0f6bacff02cc 244 PRINTS PR00969 Pili chaperone signature 104 121 1.6E-28 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_15161 4ab6866b2ac3b1eb612e0f6bacff02cc 244 PRINTS PR00969 Pili chaperone signature 131 146 1.6E-28 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_15161 4ab6866b2ac3b1eb612e0f6bacff02cc 244 SUPERFAMILY SSF49354 22 149 1.1E-38 T 13-10-2018 IPR008962 PapD-like superfamily Y11_15161 4ab6866b2ac3b1eb612e0f6bacff02cc 244 Gene3D G3DSA:2.60.40.10 152 244 2.2E-16 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_15161 4ab6866b2ac3b1eb612e0f6bacff02cc 244 SUPERFAMILY SSF49584 167 241 2.49E-13 T 13-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily Y11_35141 201f1d5291578213b08bc51efbe574ae 103 Pfam PF04341 Protein of unknown function, DUF485 11 98 4.8E-34 T 13-10-2018 IPR007436 Protein of unknown function DUF485 Y11_03431 6a6b752335319acc2d08ab06804c2bee 206 Gene3D G3DSA:3.40.30.10 1 83 2.8E-34 T 13-10-2018 Y11_03431 6a6b752335319acc2d08ab06804c2bee 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 8.8E-15 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Y11_03431 6a6b752335319acc2d08ab06804c2bee 206 Gene3D G3DSA:1.20.1050.10 85 201 3.0E-40 T 13-10-2018 Y11_03431 6a6b752335319acc2d08ab06804c2bee 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 123 194 1.7E-6 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal Y11_03431 6a6b752335319acc2d08ab06804c2bee 206 SUPERFAMILY SSF52833 1 83 1.12E-23 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_03431 6a6b752335319acc2d08ab06804c2bee 206 SUPERFAMILY SSF47616 72 202 1.14E-24 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Y11_16511 f3ccca84b4d89458df120d301ce4bede 275 SUPERFAMILY SSF51735 2 267 2.09E-30 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_16511 f3ccca84b4d89458df120d301ce4bede 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 213 8.5E-7 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Y11_16511 f3ccca84b4d89458df120d301ce4bede 275 Gene3D G3DSA:3.40.50.720 1 271 4.2E-60 T 13-10-2018 Y11_10591 316b44404159ec697bbcb9d7cdc190ed 200 Pfam PF00925 GTP cyclohydrolase II 9 174 2.1E-66 T 13-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Y11_10591 316b44404159ec697bbcb9d7cdc190ed 200 Gene3D G3DSA:3.40.50.10990 5 178 1.0E-75 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Y11_10591 316b44404159ec697bbcb9d7cdc190ed 200 SUPERFAMILY SSF142695 7 177 9.15E-66 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Y11_10591 316b44404159ec697bbcb9d7cdc190ed 200 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 9 198 1.4E-91 T 13-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Y11_10591 316b44404159ec697bbcb9d7cdc190ed 200 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 5 200 48.059 T 13-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Y11_20271 d35de8b2b148a94f967480dd2184aa9f 292 PRINTS PR00691 Adhesin B signature 67 86 2.9E-20 T 13-10-2018 IPR006129 Adhesin B GO:0007155 Y11_20271 d35de8b2b148a94f967480dd2184aa9f 292 PRINTS PR00691 Adhesin B signature 178 195 2.9E-20 T 13-10-2018 IPR006129 Adhesin B GO:0007155 Y11_20271 d35de8b2b148a94f967480dd2184aa9f 292 PRINTS PR00691 Adhesin B signature 23 44 2.9E-20 T 13-10-2018 IPR006129 Adhesin B GO:0007155 Y11_20271 d35de8b2b148a94f967480dd2184aa9f 292 PRINTS PR00691 Adhesin B signature 48 66 2.9E-20 T 13-10-2018 IPR006129 Adhesin B GO:0007155 Y11_20271 d35de8b2b148a94f967480dd2184aa9f 292 PRINTS PR00691 Adhesin B signature 227 244 2.9E-20 T 13-10-2018 IPR006129 Adhesin B GO:0007155 Y11_20271 d35de8b2b148a94f967480dd2184aa9f 292 PRINTS PR00691 Adhesin B signature 270 288 2.9E-20 T 13-10-2018 IPR006129 Adhesin B GO:0007155 Y11_20271 d35de8b2b148a94f967480dd2184aa9f 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 27 288 1.0E-76 T 13-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Y11_20271 d35de8b2b148a94f967480dd2184aa9f 292 Gene3D G3DSA:3.40.50.1980 23 163 1.5E-41 T 13-10-2018 Y11_20271 d35de8b2b148a94f967480dd2184aa9f 292 Gene3D G3DSA:3.40.50.1980 164 292 7.7E-42 T 13-10-2018 Y11_20271 d35de8b2b148a94f967480dd2184aa9f 292 SUPERFAMILY SSF53807 20 292 5.4E-82 T 13-10-2018 Y11_20271 d35de8b2b148a94f967480dd2184aa9f 292 PRINTS PR00690 Adhesin family signature 231 249 2.2E-27 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Y11_20271 d35de8b2b148a94f967480dd2184aa9f 292 PRINTS PR00690 Adhesin family signature 54 67 2.2E-27 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Y11_20271 d35de8b2b148a94f967480dd2184aa9f 292 PRINTS PR00690 Adhesin family signature 178 199 2.2E-27 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Y11_20271 d35de8b2b148a94f967480dd2184aa9f 292 PRINTS PR00690 Adhesin family signature 67 84 2.2E-27 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Y11_20271 d35de8b2b148a94f967480dd2184aa9f 292 PRINTS PR00690 Adhesin family signature 257 276 2.2E-27 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Y11_20271 d35de8b2b148a94f967480dd2184aa9f 292 PRINTS PR00690 Adhesin family signature 23 41 2.2E-27 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Y11_33151 7302af87ab1303293edffea8d3d4979f 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.7E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Y11_33151 7302af87ab1303293edffea8d3d4979f 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.7E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Y11_33151 7302af87ab1303293edffea8d3d4979f 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.7E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Y11_33151 7302af87ab1303293edffea8d3d4979f 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 2.8E-68 T 13-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 Y11_33151 7302af87ab1303293edffea8d3d4979f 141 Pfam PF13411 MerR HTH family regulatory protein 3 69 8.5E-20 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Y11_33151 7302af87ab1303293edffea8d3d4979f 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Y11_33151 7302af87ab1303293edffea8d3d4979f 141 SMART SM00422 2 71 3.4E-31 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Y11_33151 7302af87ab1303293edffea8d3d4979f 141 Gene3D G3DSA:1.10.1660.10 1 129 2.7E-36 T 13-10-2018 Y11_33151 7302af87ab1303293edffea8d3d4979f 141 SUPERFAMILY SSF46955 2 121 1.54E-33 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Y11_13961 79263bc62ea913be8b1a086e86762c41 253 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 52 65 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site Y11_13961 79263bc62ea913be8b1a086e86762c41 253 Gene3D G3DSA:3.40.190.10 113 212 5.8E-73 T 13-10-2018 Y11_13961 79263bc62ea913be8b1a086e86762c41 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 248 1.1E-72 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_13961 79263bc62ea913be8b1a086e86762c41 253 SMART SM00062 29 250 5.8E-86 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_13961 79263bc62ea913be8b1a086e86762c41 253 SMART SM00079 29 249 6.8E-5 T 13-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Y11_13961 79263bc62ea913be8b1a086e86762c41 253 SUPERFAMILY SSF53850 2 251 4.81E-79 T 13-10-2018 Y11_13961 79263bc62ea913be8b1a086e86762c41 253 Gene3D G3DSA:3.40.190.10 27 247 5.8E-73 T 13-10-2018 Y11_38441 65cdd5f64d0480d54e7b6eafba72576a 299 SUPERFAMILY SSF53850 92 290 1.01E-26 T 13-10-2018 Y11_38441 65cdd5f64d0480d54e7b6eafba72576a 299 Gene3D G3DSA:3.40.190.10 99 283 2.1E-8 T 13-10-2018 Y11_38441 65cdd5f64d0480d54e7b6eafba72576a 299 Gene3D G3DSA:1.10.10.10 5 95 2.2E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_38441 65cdd5f64d0480d54e7b6eafba72576a 299 Gene3D G3DSA:3.40.190.10 171 268 2.1E-8 T 13-10-2018 Y11_38441 65cdd5f64d0480d54e7b6eafba72576a 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.2E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_38441 65cdd5f64d0480d54e7b6eafba72576a 299 SUPERFAMILY SSF46785 1 87 8.17E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_38441 65cdd5f64d0480d54e7b6eafba72576a 299 Pfam PF03466 LysR substrate binding domain 98 288 1.2E-12 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_19091 81d44765ab7e9f764ee8d0a47de76be9 292 SMART SM00116 78 127 3.9 T 13-10-2018 IPR000644 CBS domain Y11_19091 81d44765ab7e9f764ee8d0a47de76be9 292 SMART SM00116 141 189 3.7 T 13-10-2018 IPR000644 CBS domain Y11_19091 81d44765ab7e9f764ee8d0a47de76be9 292 Pfam PF00571 CBS domain 69 123 5.3E-8 T 13-10-2018 IPR000644 CBS domain Y11_19091 81d44765ab7e9f764ee8d0a47de76be9 292 Pfam PF00571 CBS domain 143 189 9.6E-5 T 13-10-2018 IPR000644 CBS domain Y11_19091 81d44765ab7e9f764ee8d0a47de76be9 292 Gene3D G3DSA:3.10.580.10 51 197 4.0E-56 T 13-10-2018 Y11_19091 81d44765ab7e9f764ee8d0a47de76be9 292 SUPERFAMILY SSF54631 66 202 3.16E-32 T 13-10-2018 Y11_19091 81d44765ab7e9f764ee8d0a47de76be9 292 Pfam PF03471 Transporter associated domain 206 281 3.2E-22 T 13-10-2018 IPR005170 Transporter-associated domain Y11_19091 81d44765ab7e9f764ee8d0a47de76be9 292 SUPERFAMILY SSF56176 203 289 3.54E-24 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Y11_19091 81d44765ab7e9f764ee8d0a47de76be9 292 Gene3D G3DSA:3.30.465.10 198 292 1.1E-34 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Y11_19091 81d44765ab7e9f764ee8d0a47de76be9 292 SMART SM01091 205 283 1.1E-30 T 13-10-2018 IPR005170 Transporter-associated domain Y11_39601 705cccf1f3610504e1cff223f3ef97b6 839 Pfam PF08482 ATP-dependent helicase C-terminal 692 824 4.4E-52 T 13-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal Y11_39601 705cccf1f3610504e1cff223f3ef97b6 839 SMART SM00490 251 353 2.1E-16 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_39601 705cccf1f3610504e1cff223f3ef97b6 839 Pfam PF04408 Helicase associated domain (HA2) 414 474 6.3E-13 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 Y11_39601 705cccf1f3610504e1cff223f3ef97b6 839 Pfam PF00271 Helicase conserved C-terminal domain 230 352 4.6E-12 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_39601 705cccf1f3610504e1cff223f3ef97b6 839 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 29 836 0.0 T 13-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 Y11_39601 705cccf1f3610504e1cff223f3ef97b6 839 Pfam PF00270 DEAD/DEAH box helicase 40 188 3.2E-9 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Y11_39601 705cccf1f3610504e1cff223f3ef97b6 839 Gene3D G3DSA:3.40.50.300 6 204 1.6E-54 T 13-10-2018 Y11_39601 705cccf1f3610504e1cff223f3ef97b6 839 SMART SM00487 27 211 2.2E-18 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Y11_39601 705cccf1f3610504e1cff223f3ef97b6 839 Gene3D G3DSA:3.40.50.300 205 371 9.3E-51 T 13-10-2018 Y11_39601 705cccf1f3610504e1cff223f3ef97b6 839 SUPERFAMILY SSF52540 40 363 5.35E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_39601 705cccf1f3610504e1cff223f3ef97b6 839 PIRSF PIRSF005496 24 838 0.0 T 13-10-2018 Y11_39601 705cccf1f3610504e1cff223f3ef97b6 839 Gene3D G3DSA:1.20.120.1080 396 501 4.3E-10 T 13-10-2018 Y11_39601 705cccf1f3610504e1cff223f3ef97b6 839 SMART SM00847 413 504 1.7E-15 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 Y11_22661 07f61c85e7156caef720c2c538128300 81 SUPERFAMILY SSF49401 9 80 2.04E-13 T 13-10-2018 IPR008966 Adhesion domain superfamily Y11_22661 07f61c85e7156caef720c2c538128300 81 Gene3D G3DSA:2.60.40.1090 6 80 7.9E-14 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Y11_29341 78bc5bbf6873b0d6949ac878a251440b 469 Gene3D G3DSA:3.10.20.70 2 104 1.5E-41 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Y11_29341 78bc5bbf6873b0d6949ac878a251440b 469 SUPERFAMILY SSF55931 102 468 3.63E-137 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Y11_29341 78bc5bbf6873b0d6949ac878a251440b 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 1.2E-214 T 13-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Y11_29341 78bc5bbf6873b0d6949ac878a251440b 469 Gene3D G3DSA:3.30.590.10 105 457 4.5E-149 T 13-10-2018 Y11_29341 78bc5bbf6873b0d6949ac878a251440b 469 SMART SM01230 102 379 1.2E-147 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Y11_29341 78bc5bbf6873b0d6949ac878a251440b 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 13-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Y11_29341 78bc5bbf6873b0d6949ac878a251440b 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 4.2E-137 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Y11_29341 78bc5bbf6873b0d6949ac878a251440b 469 SUPERFAMILY SSF54368 3 99 2.22E-36 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Y11_29341 78bc5bbf6873b0d6949ac878a251440b 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 4.9E-32 T 13-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Y11_29341 78bc5bbf6873b0d6949ac878a251440b 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 13-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Y11_29341 78bc5bbf6873b0d6949ac878a251440b 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 13-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Y11_23281 da00a9c16619d981a6a11ab51e02008a 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 3.3E-87 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Y11_23281 da00a9c16619d981a6a11ab51e02008a 243 SUPERFAMILY SSF88697 2 69 1.69E-17 T 13-10-2018 IPR015947 PUA-like superfamily Y11_23281 da00a9c16619d981a6a11ab51e02008a 243 PIRSF PIRSF015601 2 242 1.3E-54 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Y11_23281 da00a9c16619d981a6a11ab51e02008a 243 SUPERFAMILY SSF75217 75 242 3.4E-51 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Y11_23281 da00a9c16619d981a6a11ab51e02008a 243 Gene3D G3DSA:3.40.1280.10 74 243 2.8E-64 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Y11_23281 da00a9c16619d981a6a11ab51e02008a 243 Pfam PF04452 RNA methyltransferase 20 236 6.1E-74 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Y11_23281 da00a9c16619d981a6a11ab51e02008a 243 Gene3D G3DSA:2.40.240.20 1 73 4.1E-22 T 13-10-2018 Y11_29461 9fb47d6e3989f98ada26588f6d726768 177 Gene3D G3DSA:2.20.25.120 52 84 4.0E-58 T 13-10-2018 Y11_29461 9fb47d6e3989f98ada26588f6d726768 177 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 1.4E-44 T 13-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Y11_29461 9fb47d6e3989f98ada26588f6d726768 177 SUPERFAMILY SSF52540 6 168 1.95E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_29461 9fb47d6e3989f98ada26588f6d726768 177 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 2.4E-47 T 13-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Y11_29461 9fb47d6e3989f98ada26588f6d726768 177 Gene3D G3DSA:3.40.50.300 9 164 4.0E-58 T 13-10-2018 Y11_13331 42e759b1c56e54137913a37ffec6dd28 151 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 128 1.9E-41 T 13-10-2018 IPR009678 Bacteriophage tail completion protein R Y11_25321 42e759b1c56e54137913a37ffec6dd28 151 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 128 1.9E-41 T 13-10-2018 IPR009678 Bacteriophage tail completion protein R Y11_41701 fbb580aa81952ef25e6ba55fad58c72b 84 Gene3D G3DSA:1.10.10.60 38 84 6.3E-12 T 13-10-2018 Y11_41701 fbb580aa81952ef25e6ba55fad58c72b 84 SUPERFAMILY SSF46689 32 82 6.72E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_41701 fbb580aa81952ef25e6ba55fad58c72b 84 SMART SM00342 1 78 1.4E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_41701 fbb580aa81952ef25e6ba55fad58c72b 84 Pfam PF12833 Helix-turn-helix domain 1 80 1.8E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_41701 fbb580aa81952ef25e6ba55fad58c72b 84 Gene3D G3DSA:1.10.10.60 1 37 3.1E-8 T 13-10-2018 Y11_41701 fbb580aa81952ef25e6ba55fad58c72b 84 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 32 74 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Y11_16161 093d496de696da38995e6631b1a315e2 275 SMART SM00877 190 267 1.4E-14 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Y11_16161 093d496de696da38995e6631b1a315e2 275 SMART SM00877 84 166 2.3E-12 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Y11_16161 093d496de696da38995e6631b1a315e2 275 SUPERFAMILY SSF143414 191 262 2.49E-11 T 13-10-2018 IPR037233 CcmK-like superfamily Y11_16161 093d496de696da38995e6631b1a315e2 275 SUPERFAMILY SSF143414 84 163 4.58E-10 T 13-10-2018 IPR037233 CcmK-like superfamily Y11_16161 093d496de696da38995e6631b1a315e2 275 PIRSF PIRSF012290 43 275 2.1E-106 T 13-10-2018 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0031469 Y11_16161 093d496de696da38995e6631b1a315e2 275 Pfam PF00936 BMC domain 191 261 8.2E-14 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Y11_16161 093d496de696da38995e6631b1a315e2 275 Pfam PF00936 BMC domain 85 159 2.8E-13 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Y11_16161 093d496de696da38995e6631b1a315e2 275 Gene3D G3DSA:3.30.70.1810 65 157 8.0E-44 T 13-10-2018 Y11_16161 093d496de696da38995e6631b1a315e2 275 Gene3D G3DSA:3.30.70.1810 158 249 8.0E-44 T 13-10-2018 Y11_16161 093d496de696da38995e6631b1a315e2 275 TIGRFAM TIGR04501 microcomp_PduB: microcompartment protein PduB 51 275 7.9E-121 T 13-10-2018 IPR030984 Microcompartment protein PduB GO:0005198 Y11_16201 a5f5f1460641120bc804a937cb373bfb 608 SUPERFAMILY SSF53067 407 600 1.58E-32 T 13-10-2018 Y11_16201 a5f5f1460641120bc804a937cb373bfb 608 Pfam PF08841 Diol dehydratase reactivase ATPase-like domain 275 602 1.7E-161 T 13-10-2018 IPR030994 Diol dehydratase reactivase ATPase-like domain Y11_16201 a5f5f1460641120bc804a937cb373bfb 608 Gene3D G3DSA:2.40.50.140 466 510 1.1E-265 T 13-10-2018 Y11_16201 a5f5f1460641120bc804a937cb373bfb 608 Gene3D G3DSA:3.30.420.40 405 582 1.1E-265 T 13-10-2018 Y11_16201 a5f5f1460641120bc804a937cb373bfb 608 Gene3D G3DSA:3.50.30.70 97 247 1.1E-265 T 13-10-2018 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain superfamily Y11_16201 a5f5f1460641120bc804a937cb373bfb 608 Gene3D G3DSA:3.30.420.40 3 600 1.1E-265 T 13-10-2018 Y11_16201 a5f5f1460641120bc804a937cb373bfb 608 SUPERFAMILY SSF82317 93 254 7.06E-68 T 13-10-2018 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain superfamily Y11_16201 a5f5f1460641120bc804a937cb373bfb 608 Gene3D G3DSA:3.90.470.30 77 370 1.1E-265 T 13-10-2018 Y11_16201 a5f5f1460641120bc804a937cb373bfb 608 TIGRFAM TIGR04491 reactive_PduG: diol dehydratase reactivase alpha subunit 3 601 2.6E-289 T 13-10-2018 IPR009191 Diol dehydratase-reactivating factor alpha subunit Y11_16201 a5f5f1460641120bc804a937cb373bfb 608 SUPERFAMILY SSF53067 2 403 4.53E-70 T 13-10-2018 Y11_16201 a5f5f1460641120bc804a937cb373bfb 608 PIRSF PIRSF011502 1 608 0.0 T 13-10-2018 IPR009191 Diol dehydratase-reactivating factor alpha subunit Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.33 T 13-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 SUPERFAMILY SSF51735 271 562 1.88E-94 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 13-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 SUPERFAMILY SSF53223 6 270 4.32E-111 T 13-10-2018 Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 PIRSF PIRSF000106 3 563 1.1E-228 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 6.7E-103 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 PRINTS PR00072 Malic enzyme signature 87 111 1.2E-71 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 PRINTS PR00072 Malic enzyme signature 242 260 1.2E-71 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 PRINTS PR00072 Malic enzyme signature 408 424 1.2E-71 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 PRINTS PR00072 Malic enzyme signature 147 176 1.2E-71 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 PRINTS PR00072 Malic enzyme signature 183 205 1.2E-71 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 PRINTS PR00072 Malic enzyme signature 267 283 1.2E-71 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 PRINTS PR00072 Malic enzyme signature 298 314 1.2E-71 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 SMART SM00919 271 531 1.3E-132 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 SMART SM01274 81 261 1.4E-109 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 Gene3D G3DSA:3.40.50.720 269 565 2.0E-109 T 13-10-2018 Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 3.4E-79 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Y11_16961 c7a316fb79fab2926dc0c48b4898fb94 565 Gene3D G3DSA:3.40.50.10380 18 268 2.4E-115 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Y11_17881 c718f826216f24a361f94766caadad0f 278 Pfam PF00005 ABC transporter 41 202 2.3E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_17881 c718f826216f24a361f94766caadad0f 278 Gene3D G3DSA:3.40.50.300 10 274 2.5E-60 T 13-10-2018 Y11_17881 c718f826216f24a361f94766caadad0f 278 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 24 269 6.1E-90 T 13-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 Y11_17881 c718f826216f24a361f94766caadad0f 278 SUPERFAMILY SSF52540 24 260 1.54E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_17881 c718f826216f24a361f94766caadad0f 278 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_17881 c718f826216f24a361f94766caadad0f 278 SMART SM00382 50 272 3.6E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_36071 574ef9c9c5ff1e71aa47ab96136b0e99 156 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 9.4E-41 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Y11_36071 574ef9c9c5ff1e71aa47ab96136b0e99 156 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 4.6E-52 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Y11_36071 574ef9c9c5ff1e71aa47ab96136b0e99 156 SUPERFAMILY SSF52540 26 134 1.78E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_36071 574ef9c9c5ff1e71aa47ab96136b0e99 156 Gene3D G3DSA:3.40.50.300 1 153 5.8E-47 T 13-10-2018 Y11_12651 cfabb19cd11e0aead742c118bc335238 388 ProSitePatterns PS00336 Beta-lactamase class-C active site. 85 92 - T 13-10-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 Y11_12651 cfabb19cd11e0aead742c118bc335238 388 Gene3D G3DSA:3.40.710.10 28 387 1.6E-121 T 13-10-2018 Y11_12651 cfabb19cd11e0aead742c118bc335238 388 SUPERFAMILY SSF56601 35 387 1.43E-97 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_12651 cfabb19cd11e0aead742c118bc335238 388 Pfam PF00144 Beta-lactamase 38 386 1.9E-78 T 13-10-2018 IPR001466 Beta-lactamase-related Y11_11121 665a900f9c0c2b606463589b09fe5f9d 154 Pfam PF02810 SEC-C motif 136 154 1.4E-10 T 13-10-2018 IPR004027 SEC-C motif Y11_11121 665a900f9c0c2b606463589b09fe5f9d 154 SUPERFAMILY SSF54427 26 130 1.17E-35 T 13-10-2018 IPR032710 NTF2-like domain superfamily Y11_11121 665a900f9c0c2b606463589b09fe5f9d 154 Gene3D G3DSA:3.10.450.50 2 154 3.5E-54 T 13-10-2018 Y11_11121 665a900f9c0c2b606463589b09fe5f9d 154 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 130 28.434 T 13-10-2018 IPR023006 Uncharacterised protein family UPF0225 Y11_11121 665a900f9c0c2b606463589b09fe5f9d 154 SUPERFAMILY SSF103642 134 153 1.01E-7 T 13-10-2018 Y11_41251 fe1ff70aef7c8f4d7588602a42b83881 182 PIRSF PIRSF011484 1 180 4.6E-69 T 13-10-2018 IPR009822 YaeQ Y11_41251 fe1ff70aef7c8f4d7588602a42b83881 182 SMART SM01322 1 176 1.9E-118 T 13-10-2018 IPR009822 YaeQ Y11_41251 fe1ff70aef7c8f4d7588602a42b83881 182 Gene3D G3DSA:3.10.640.10 1 181 4.0E-76 T 13-10-2018 IPR038590 YaeQ superfamily Y11_41251 fe1ff70aef7c8f4d7588602a42b83881 182 Pfam PF07152 YaeQ protein 1 173 3.0E-75 T 13-10-2018 IPR009822 YaeQ Y11_41251 fe1ff70aef7c8f4d7588602a42b83881 182 SUPERFAMILY SSF52980 2 179 2.25E-71 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Y11_21371 6e3cfe46dc21a3c7c59429152253477e 366 Gene3D G3DSA:3.30.1490.20 155 224 1.3E-86 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Y11_21371 6e3cfe46dc21a3c7c59429152253477e 366 SUPERFAMILY SSF56059 140 357 5.48E-57 T 13-10-2018 Y11_21371 6e3cfe46dc21a3c7c59429152253477e 366 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 1.2E-74 T 13-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_21371 6e3cfe46dc21a3c7c59429152253477e 366 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 42.304 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_21371 6e3cfe46dc21a3c7c59429152253477e 366 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 1.6E-112 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_21371 6e3cfe46dc21a3c7c59429152253477e 366 Gene3D G3DSA:3.40.50.20 1 128 4.7E-45 T 13-10-2018 Y11_21371 6e3cfe46dc21a3c7c59429152253477e 366 Gene3D G3DSA:3.30.470.20 129 353 1.3E-86 T 13-10-2018 Y11_21371 6e3cfe46dc21a3c7c59429152253477e 366 PIRSF PIRSF039102 1 359 5.8E-132 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_21371 6e3cfe46dc21a3c7c59429152253477e 366 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_21371 6e3cfe46dc21a3c7c59429152253477e 366 SUPERFAMILY SSF52440 3 139 1.92E-37 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Y11_21371 6e3cfe46dc21a3c7c59429152253477e 366 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_21371 6e3cfe46dc21a3c7c59429152253477e 366 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 2.2E-31 T 13-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_35291 87a9b114bde3c114d868646c8cd81b3a 153 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 26 151 4.3E-31 T 13-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD Y11_35291 87a9b114bde3c114d868646c8cd81b3a 153 SUPERFAMILY SSF48452 33 138 6.33E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_35291 87a9b114bde3c114d868646c8cd81b3a 153 Gene3D G3DSA:1.25.40.10 16 153 1.1E-28 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_21791 13674c19774733f8dd3f20cdeeb3424d 170 SMART SM00347 46 148 2.6E-31 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Y11_21791 13674c19774733f8dd3f20cdeeb3424d 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 1.9E-22 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Y11_21791 13674c19774733f8dd3f20cdeeb3424d 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 1.9E-22 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Y11_21791 13674c19774733f8dd3f20cdeeb3424d 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 1.9E-22 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Y11_21791 13674c19774733f8dd3f20cdeeb3424d 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 1.9E-22 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Y11_21791 13674c19774733f8dd3f20cdeeb3424d 170 SUPERFAMILY SSF46785 21 165 3.18E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_21791 13674c19774733f8dd3f20cdeeb3424d 170 Pfam PF01047 MarR family 53 112 2.5E-16 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Y11_21791 13674c19774733f8dd3f20cdeeb3424d 170 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Y11_21791 13674c19774733f8dd3f20cdeeb3424d 170 Gene3D G3DSA:1.10.10.10 8 164 8.3E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_11031 13bad6e728024259f6ba42a944184374 199 PIRSF PIRSF035805 1 197 7.4E-58 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Y11_11031 13bad6e728024259f6ba42a944184374 199 Gene3D G3DSA:3.40.50.300 1 141 7.5E-27 T 13-10-2018 Y11_11031 13bad6e728024259f6ba42a944184374 199 Pfam PF00265 Thymidine kinase 2 186 7.4E-62 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Y11_11031 13bad6e728024259f6ba42a944184374 199 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 13-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Y11_11031 13bad6e728024259f6ba42a944184374 199 Gene3D G3DSA:3.30.60.20 144 190 3.9E-10 T 13-10-2018 Y11_11031 13bad6e728024259f6ba42a944184374 199 SUPERFAMILY SSF52540 1 141 2.6E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_11031 13bad6e728024259f6ba42a944184374 199 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.97 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Y11_11031 13bad6e728024259f6ba42a944184374 199 SUPERFAMILY SSF57716 142 191 1.24E-17 T 13-10-2018 Y11_01141 55747b7b94a9eed84c38a4ec6323c347 268 SUPERFAMILY SSF52540 9 246 4.66E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_01141 55747b7b94a9eed84c38a4ec6323c347 268 Gene3D G3DSA:3.40.50.300 8 265 2.8E-63 T 13-10-2018 Y11_01141 55747b7b94a9eed84c38a4ec6323c347 268 Pfam PF00005 ABC transporter 27 176 4.9E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_01141 55747b7b94a9eed84c38a4ec6323c347 268 SMART SM00382 35 224 1.1E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_07381 a560241386fc8ddbb38cd00152892cfa 242 Gene3D G3DSA:1.10.1710.10 1 128 9.7E-25 T 13-10-2018 IPR036442 ProQ/FinO domain superfamily Y11_07381 a560241386fc8ddbb38cd00152892cfa 242 SMART SM00945 5 119 5.0E-61 T 13-10-2018 IPR016103 ProQ/FinO domain Y11_07381 a560241386fc8ddbb38cd00152892cfa 242 SUPERFAMILY SSF48657 5 119 2.09E-39 T 13-10-2018 IPR036442 ProQ/FinO domain superfamily Y11_07381 a560241386fc8ddbb38cd00152892cfa 242 Pfam PF17516 ProQ C-terminal domain 192 242 1.1E-24 T 13-10-2018 IPR035236 RNA chaperone ProQ, C-terminal Y11_07381 a560241386fc8ddbb38cd00152892cfa 242 Pfam PF04352 ProQ/FINO family 8 115 8.0E-43 T 13-10-2018 IPR016103 ProQ/FinO domain Y11_07381 a560241386fc8ddbb38cd00152892cfa 242 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 242 30.927 T 13-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 Y11_02621 8bd52c0d444795e739118b238b9a7422 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 3.5E-117 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_02621 8bd52c0d444795e739118b238b9a7422 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_02621 8bd52c0d444795e739118b238b9a7422 761 Pfam PF03477 ATP cone domain 6 92 1.1E-15 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Y11_02621 8bd52c0d444795e739118b238b9a7422 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 4.9E-38 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_02621 8bd52c0d444795e739118b238b9a7422 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 4.9E-38 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_02621 8bd52c0d444795e739118b238b9a7422 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 4.9E-38 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_02621 8bd52c0d444795e739118b238b9a7422 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 4.9E-38 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_02621 8bd52c0d444795e739118b238b9a7422 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 4.9E-38 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_02621 8bd52c0d444795e739118b238b9a7422 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 4.9E-38 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_02621 8bd52c0d444795e739118b238b9a7422 761 SUPERFAMILY SSF51998 222 741 6.71E-168 T 13-10-2018 Y11_02621 8bd52c0d444795e739118b238b9a7422 761 SUPERFAMILY SSF48168 10 221 2.49E-73 T 13-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_02621 8bd52c0d444795e739118b238b9a7422 761 Gene3D G3DSA:1.10.1650.20 341 394 1.5E-156 T 13-10-2018 Y11_02621 8bd52c0d444795e739118b238b9a7422 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 6.2E-13 T 13-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_02621 8bd52c0d444795e739118b238b9a7422 761 Gene3D G3DSA:3.20.70.20 209 732 1.5E-156 T 13-10-2018 Y11_02621 8bd52c0d444795e739118b238b9a7422 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 8.6E-180 T 13-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_27071 0e46b7debe895a25d5e6f069bbb1faa4 481 PIRSF PIRSF004919 14 481 1.4E-146 T 13-10-2018 IPR025502 TldD Y11_27071 0e46b7debe895a25d5e6f069bbb1faa4 481 SUPERFAMILY SSF111283 18 480 1.31E-130 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Y11_27071 0e46b7debe895a25d5e6f069bbb1faa4 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 1.5E-67 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Y11_27071 0e46b7debe895a25d5e6f069bbb1faa4 481 Gene3D G3DSA:3.30.2290.10 11 240 8.0E-18 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Y11_04581 162cab68bc2dc71200c3107d4ca0575a 424 SUPERFAMILY SSF53901 225 422 2.97E-65 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_04581 162cab68bc2dc71200c3107d4ca0575a 424 Gene3D G3DSA:3.40.47.10 1 265 4.6E-85 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_04581 162cab68bc2dc71200c3107d4ca0575a 424 SUPERFAMILY SSF53901 3 262 2.31E-72 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_04581 162cab68bc2dc71200c3107d4ca0575a 424 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 164 180 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site Y11_04581 162cab68bc2dc71200c3107d4ca0575a 424 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 265 378 1.4E-35 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Y11_04581 162cab68bc2dc71200c3107d4ca0575a 424 PIRSF PIRSF000447 1 424 7.3E-164 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Y11_04581 162cab68bc2dc71200c3107d4ca0575a 424 SMART SM00825 Beta-ketoacyl synthase 6 424 5.7E-14 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Y11_04581 162cab68bc2dc71200c3107d4ca0575a 424 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 257 4.2E-59 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Y11_04581 162cab68bc2dc71200c3107d4ca0575a 424 Gene3D G3DSA:3.40.47.10 271 424 1.1E-48 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_04581 162cab68bc2dc71200c3107d4ca0575a 424 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 420 2.7E-166 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Y11_23901 0927c288b40a671e4f6e4b5749b4ffe3 854 SUPERFAMILY SSF141868 606 848 4.84E-87 T 13-10-2018 IPR035919 EAL domain superfamily Y11_23901 0927c288b40a671e4f6e4b5749b4ffe3 854 SUPERFAMILY SSF55785 299 416 1.14E-18 T 13-10-2018 IPR035965 PAS domain superfamily Y11_23901 0927c288b40a671e4f6e4b5749b4ffe3 854 Gene3D G3DSA:3.30.450.20 294 423 8.1E-18 T 13-10-2018 Y11_23901 0927c288b40a671e4f6e4b5749b4ffe3 854 Gene3D G3DSA:3.20.20.450 604 849 7.1E-95 T 13-10-2018 IPR035919 EAL domain superfamily Y11_23901 0927c288b40a671e4f6e4b5749b4ffe3 854 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 304 424 3.5E-13 T 13-10-2018 IPR000014 PAS domain Y11_23901 0927c288b40a671e4f6e4b5749b4ffe3 854 SMART SM00267 418 590 4.3E-66 T 13-10-2018 IPR000160 GGDEF domain Y11_23901 0927c288b40a671e4f6e4b5749b4ffe3 854 Pfam PF00990 Diguanylate cyclase, GGDEF domain 430 586 2.0E-49 T 13-10-2018 IPR000160 GGDEF domain Y11_23901 0927c288b40a671e4f6e4b5749b4ffe3 854 Pfam PF05228 CHASE4 domain 66 225 7.3E-20 T 13-10-2018 IPR007892 CHASE4 Y11_23901 0927c288b40a671e4f6e4b5749b4ffe3 854 Gene3D G3DSA:3.30.70.270 424 603 4.0E-59 T 13-10-2018 Y11_23901 0927c288b40a671e4f6e4b5749b4ffe3 854 Pfam PF00989 PAS fold 306 415 3.6E-8 T 13-10-2018 IPR013767 PAS fold GO:0006355 Y11_23901 0927c288b40a671e4f6e4b5749b4ffe3 854 SMART SM00052 600 842 4.9E-111 T 13-10-2018 IPR001633 EAL domain Y11_23901 0927c288b40a671e4f6e4b5749b4ffe3 854 Pfam PF00563 EAL domain 608 837 1.3E-71 T 13-10-2018 IPR001633 EAL domain Y11_23901 0927c288b40a671e4f6e4b5749b4ffe3 854 SMART SM00091 306 371 2.8E-7 T 13-10-2018 IPR000014 PAS domain Y11_23901 0927c288b40a671e4f6e4b5749b4ffe3 854 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 425 587 4.0E-44 T 13-10-2018 IPR000160 GGDEF domain Y11_23901 0927c288b40a671e4f6e4b5749b4ffe3 854 SUPERFAMILY SSF55073 434 592 4.32E-50 T 13-10-2018 IPR029787 Nucleotide cyclase Y11_13531 c634bf7a30d5acd14982c21253cfc2ac 150 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 17 39 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Y11_13531 c634bf7a30d5acd14982c21253cfc2ac 150 PIRSF PIRSF000847 1 149 9.5E-37 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Y11_13531 c634bf7a30d5acd14982c21253cfc2ac 150 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 39 3.3E-12 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Y11_13531 c634bf7a30d5acd14982c21253cfc2ac 150 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 148 1.6E-50 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Y11_13531 c634bf7a30d5acd14982c21253cfc2ac 150 Gene3D G3DSA:1.20.120.1760 1 144 4.2E-11 T 13-10-2018 Y11_36471 f0b3a7a66831c7e92dbfc43adc710032 526 Gene3D G3DSA:1.10.287.950 216 518 2.1E-86 T 13-10-2018 Y11_36471 f0b3a7a66831c7e92dbfc43adc710032 526 Pfam PF02203 Tar ligand binding domain homologue 1 170 1.3E-19 T 13-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 Y11_36471 f0b3a7a66831c7e92dbfc43adc710032 526 SMART SM00283 269 516 9.8E-88 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_36471 f0b3a7a66831c7e92dbfc43adc710032 526 SUPERFAMILY SSF47170 30 173 1.41E-9 T 13-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Y11_36471 f0b3a7a66831c7e92dbfc43adc710032 526 SMART SM00304 216 268 3.0E-4 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_36471 f0b3a7a66831c7e92dbfc43adc710032 526 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 483 4.8E-55 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_36471 f0b3a7a66831c7e92dbfc43adc710032 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 2.1E-54 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_36471 f0b3a7a66831c7e92dbfc43adc710032 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.1E-54 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_36471 f0b3a7a66831c7e92dbfc43adc710032 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 2.1E-54 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_36471 f0b3a7a66831c7e92dbfc43adc710032 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 2.1E-54 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_36471 f0b3a7a66831c7e92dbfc43adc710032 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 2.1E-54 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_36471 f0b3a7a66831c7e92dbfc43adc710032 526 SUPERFAMILY SSF58104 236 522 4.19E-71 T 13-10-2018 Y11_38151 b9e26a2d4aa1e12d4001d36496eb93ae 303 SUPERFAMILY SSF46785 5 89 5.9E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_38151 b9e26a2d4aa1e12d4001d36496eb93ae 303 SUPERFAMILY SSF53850 89 289 3.62E-43 T 13-10-2018 Y11_38151 b9e26a2d4aa1e12d4001d36496eb93ae 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.5E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_38151 b9e26a2d4aa1e12d4001d36496eb93ae 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.5E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_38151 b9e26a2d4aa1e12d4001d36496eb93ae 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.5E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_38151 b9e26a2d4aa1e12d4001d36496eb93ae 303 Pfam PF03466 LysR substrate binding domain 89 289 6.3E-42 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_38151 b9e26a2d4aa1e12d4001d36496eb93ae 303 Gene3D G3DSA:1.10.10.10 3 92 1.0E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_38151 b9e26a2d4aa1e12d4001d36496eb93ae 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.8E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_38151 b9e26a2d4aa1e12d4001d36496eb93ae 303 Gene3D G3DSA:3.40.190.290 93 290 2.2E-59 T 13-10-2018 Y11_02481 f7c31dba7f90cba6c3d781f4f9ea57c5 464 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 36 453 5.9E-119 T 13-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 Y11_02481 f7c31dba7f90cba6c3d781f4f9ea57c5 464 Pfam PF00501 AMP-binding enzyme 16 365 9.3E-51 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Y11_02481 f7c31dba7f90cba6c3d781f4f9ea57c5 464 ProSitePatterns PS00455 Putative AMP-binding domain signature. 148 159 - T 13-10-2018 IPR020845 AMP-binding, conserved site Y11_02481 f7c31dba7f90cba6c3d781f4f9ea57c5 464 SUPERFAMILY SSF56801 15 459 5.36E-90 T 13-10-2018 Y11_02481 f7c31dba7f90cba6c3d781f4f9ea57c5 464 Gene3D G3DSA:3.30.300.30 364 441 3.4E-14 T 13-10-2018 Y11_02481 f7c31dba7f90cba6c3d781f4f9ea57c5 464 Gene3D G3DSA:3.40.50.12780 13 363 1.8E-65 T 13-10-2018 Y11_02481 f7c31dba7f90cba6c3d781f4f9ea57c5 464 Pfam PF13193 AMP-binding enzyme C-terminal domain 377 443 7.7E-6 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Y11_19141 dc68430a1f81d40b6de54fc4436ad21b 224 Gene3D G3DSA:1.10.3720.10 2 224 5.0E-50 T 13-10-2018 IPR035906 MetI-like superfamily Y11_19141 dc68430a1f81d40b6de54fc4436ad21b 224 SUPERFAMILY SSF161098 14 209 5.1E-39 T 13-10-2018 IPR035906 MetI-like superfamily Y11_19141 dc68430a1f81d40b6de54fc4436ad21b 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 4.9E-24 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Y11_19141 dc68430a1f81d40b6de54fc4436ad21b 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 5.6E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_18971 90045526b1936180ba0b3b62044aea01 555 SUPERFAMILY SSF52374 28 346 2.79E-101 T 13-10-2018 Y11_18971 90045526b1936180ba0b3b62044aea01 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 1.6E-126 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Y11_18971 90045526b1936180ba0b3b62044aea01 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Y11_18971 90045526b1936180ba0b3b62044aea01 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Y11_18971 90045526b1936180ba0b3b62044aea01 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Y11_18971 90045526b1936180ba0b3b62044aea01 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Y11_18971 90045526b1936180ba0b3b62044aea01 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 549 53.701 T 13-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 Y11_18971 90045526b1936180ba0b3b62044aea01 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 550 1.9E-303 T 13-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Y11_18971 90045526b1936180ba0b3b62044aea01 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_18971 90045526b1936180ba0b3b62044aea01 555 Gene3D G3DSA:2.40.240.10 463 547 3.7E-34 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Y11_18971 90045526b1936180ba0b3b62044aea01 555 Gene3D G3DSA:1.10.1160.10 261 339 3.0E-34 T 13-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 Y11_18971 90045526b1936180ba0b3b62044aea01 555 Gene3D G3DSA:3.40.50.620 30 247 9.6E-107 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_18971 90045526b1936180ba0b3b62044aea01 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 528 1.1E-62 T 13-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Y11_18971 90045526b1936180ba0b3b62044aea01 555 SUPERFAMILY SSF50715 340 547 1.46E-80 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Y11_18971 90045526b1936180ba0b3b62044aea01 555 Gene3D G3DSA:3.90.800.10 101 209 9.6E-107 T 13-10-2018 Y11_18971 90045526b1936180ba0b3b62044aea01 555 Gene3D G3DSA:2.40.240.10 348 462 3.6E-47 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Y11_11451 c7b4d48160342ebd1149ced3e21f25f2 239 SUPERFAMILY SSF46785 11 87 2.85E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_11451 c7b4d48160342ebd1149ced3e21f25f2 239 SUPERFAMILY SSF48008 79 230 9.02E-66 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Y11_11451 c7b4d48160342ebd1149ced3e21f25f2 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 162.458 T 13-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 Y11_11451 c7b4d48160342ebd1149ced3e21f25f2 239 Gene3D G3DSA:1.10.10.10 1 79 4.9E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_11451 c7b4d48160342ebd1149ced3e21f25f2 239 SMART SM00345 12 71 5.9E-23 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_11451 c7b4d48160342ebd1149ced3e21f25f2 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.8E-20 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_11451 c7b4d48160342ebd1149ced3e21f25f2 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_11451 c7b4d48160342ebd1149ced3e21f25f2 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_11451 c7b4d48160342ebd1149ced3e21f25f2 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 236 1.8E-122 T 13-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 Y11_11451 c7b4d48160342ebd1149ced3e21f25f2 239 Gene3D G3DSA:1.20.120.530 80 239 3.6E-44 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Y11_11451 c7b4d48160342ebd1149ced3e21f25f2 239 Pfam PF07840 FadR C-terminal domain 72 234 7.9E-74 T 13-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 Y11_07011 2f6461623704172f31d026f46142ca21 444 SUPERFAMILY SSF53448 66 345 1.63E-63 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_07011 2f6461623704172f31d026f46142ca21 444 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 30 438 1.3E-192 T 13-10-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 Y11_07011 2f6461623704172f31d026f46142ca21 444 Gene3D G3DSA:3.90.550.10 68 285 1.0E-43 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_07011 2f6461623704172f31d026f46142ca21 444 Pfam PF00535 Glycosyl transferase family 2 78 245 1.3E-35 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Y11_32091 2bd2231b2ec0d92dca18a1bba5aadb42 387 SUPERFAMILY SSF103473 4 378 1.31E-23 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_32091 2bd2231b2ec0d92dca18a1bba5aadb42 387 Pfam PF07690 Major Facilitator Superfamily 5 344 6.5E-13 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_32091 2bd2231b2ec0d92dca18a1bba5aadb42 387 Gene3D G3DSA:1.20.1250.20 200 382 1.0E-7 T 13-10-2018 Y11_32091 2bd2231b2ec0d92dca18a1bba5aadb42 387 Gene3D G3DSA:1.20.1250.20 1 181 2.5E-11 T 13-10-2018 Y11_42911 51b913b8d7562abb387c20933748517e 374 Gene3D G3DSA:3.30.413.10 262 361 3.5E-22 T 13-10-2018 Y11_42911 51b913b8d7562abb387c20933748517e 374 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 352 2.9E-124 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Y11_42911 51b913b8d7562abb387c20933748517e 374 SUPERFAMILY SSF51604 23 139 3.88E-9 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Y11_42911 51b913b8d7562abb387c20933748517e 374 Pfam PF04551 GcpE protein 14 354 2.5E-130 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Y11_42911 51b913b8d7562abb387c20933748517e 374 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.246 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Y11_42911 51b913b8d7562abb387c20933748517e 374 PIRSF PIRSF004640 1 364 3.1E-146 T 13-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Y11_42911 51b913b8d7562abb387c20933748517e 374 Gene3D G3DSA:3.20.20.20 1 261 9.0E-104 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_42911 51b913b8d7562abb387c20933748517e 374 SUPERFAMILY SSF56014 265 354 4.8E-11 T 13-10-2018 Y11_10931 1c2d1263f70c15af0ccd419c83bcde1d 486 SUPERFAMILY SSF56024 274 473 1.88E-49 T 13-10-2018 Y11_10931 1c2d1263f70c15af0ccd419c83bcde1d 486 Gene3D G3DSA:3.30.870.10 111 306 1.3E-35 T 13-10-2018 Y11_10931 1c2d1263f70c15af0ccd419c83bcde1d 486 Gene3D G3DSA:3.30.870.10 316 458 1.3E-25 T 13-10-2018 Y11_10931 1c2d1263f70c15af0ccd419c83bcde1d 486 Pfam PF13091 PLD-like domain 135 244 3.3E-11 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Y11_10931 1c2d1263f70c15af0ccd419c83bcde1d 486 Pfam PF13091 PLD-like domain 331 448 2.3E-23 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Y11_10931 1c2d1263f70c15af0ccd419c83bcde1d 486 SMART SM00155 219 246 0.001 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Y11_10931 1c2d1263f70c15af0ccd419c83bcde1d 486 SMART SM00155 399 426 7.3E-5 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Y11_10931 1c2d1263f70c15af0ccd419c83bcde1d 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 2.3E-7 T 13-10-2018 IPR027379 Cardiolipin synthase N-terminal Y11_10931 1c2d1263f70c15af0ccd419c83bcde1d 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 52.193 T 13-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 Y11_10931 1c2d1263f70c15af0ccd419c83bcde1d 486 SUPERFAMILY SSF56024 66 315 8.9E-48 T 13-10-2018 Y11_10931 1c2d1263f70c15af0ccd419c83bcde1d 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 6.3E-206 T 13-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 Y11_42951 e69057253a61b4fe7c7e876beaf43ceb 393 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 392 1.7E-135 T 13-10-2018 IPR017687 Outer membrane protein assembly factor BamB Y11_42951 e69057253a61b4fe7c7e876beaf43ceb 393 Gene3D G3DSA:2.130.10.10 21 392 7.7E-95 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Y11_42951 e69057253a61b4fe7c7e876beaf43ceb 393 SUPERFAMILY SSF50998 24 385 1.77E-76 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Y11_42951 e69057253a61b4fe7c7e876beaf43ceb 393 SMART SM00564 115 147 0.37 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Y11_42951 e69057253a61b4fe7c7e876beaf43ceb 393 SMART SM00564 201 232 56.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Y11_42951 e69057253a61b4fe7c7e876beaf43ceb 393 SMART SM00564 65 96 6.2 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Y11_42951 e69057253a61b4fe7c7e876beaf43ceb 393 SMART SM00564 289 321 120.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Y11_42951 e69057253a61b4fe7c7e876beaf43ceb 393 SMART SM00564 156 187 2.8E-4 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Y11_42951 e69057253a61b4fe7c7e876beaf43ceb 393 SMART SM00564 330 362 8.1 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Y11_42951 e69057253a61b4fe7c7e876beaf43ceb 393 SMART SM00564 252 283 7.7E-6 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Y11_42951 e69057253a61b4fe7c7e876beaf43ceb 393 Pfam PF13360 PQQ-like domain 78 320 1.6E-51 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Y11_42951 e69057253a61b4fe7c7e876beaf43ceb 393 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 393 40.839 T 13-10-2018 IPR017687 Outer membrane protein assembly factor BamB Y11_43141 92c8febc4d8b4a4405190a6ea7aab4eb 266 Gene3D G3DSA:3.40.1190.20 1 266 2.7E-100 T 13-10-2018 IPR029056 Ribokinase-like Y11_43141 92c8febc4d8b4a4405190a6ea7aab4eb 266 SUPERFAMILY SSF53613 5 266 5.3E-78 T 13-10-2018 IPR029056 Ribokinase-like Y11_43141 92c8febc4d8b4a4405190a6ea7aab4eb 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 1.3E-92 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Y11_43141 92c8febc4d8b4a4405190a6ea7aab4eb 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 1.5E-101 T 13-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Y11_29691 395bc39664bf76eb072c88a67576c40e 252 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 252 15.816 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29691 395bc39664bf76eb072c88a67576c40e 252 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 20 247 3.0E-43 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29691 395bc39664bf76eb072c88a67576c40e 252 Pfam PF00119 ATP synthase A chain 29 246 2.6E-54 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29691 395bc39664bf76eb072c88a67576c40e 252 Gene3D G3DSA:1.20.120.220 76 252 1.1E-69 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29691 395bc39664bf76eb072c88a67576c40e 252 SUPERFAMILY SSF81336 76 246 1.57E-48 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29691 395bc39664bf76eb072c88a67576c40e 252 ProSitePatterns PS00449 ATP synthase a subunit signature. 187 196 - T 13-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29691 395bc39664bf76eb072c88a67576c40e 252 PRINTS PR00123 ATP synthase A subunit signature 232 247 3.0E-15 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29691 395bc39664bf76eb072c88a67576c40e 252 PRINTS PR00123 ATP synthase A subunit signature 184 206 3.0E-15 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29691 395bc39664bf76eb072c88a67576c40e 252 PRINTS PR00123 ATP synthase A subunit signature 85 101 3.0E-15 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 Gene3D G3DSA:1.10.730.10 454 576 1.0E-31 T 13-10-2018 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 Gene3D G3DSA:3.30.1360.70 1 106 2.7E-35 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 28.577 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 Gene3D G3DSA:3.40.50.620 107 453 6.1E-110 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 SMART SM00836 460 576 4.3E-36 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 SUPERFAMILY SSF52374 108 451 1.06E-95 T 13-10-2018 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 Pfam PF05746 DALR anticodon binding domain 460 576 4.1E-33 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 SMART SM01016 5 87 1.2E-28 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 SUPERFAMILY SSF47323 454 576 1.05E-34 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 576 6.9E-205 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 SUPERFAMILY SSF55190 2 100 1.57E-22 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 3.3E-21 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 Pfam PF00750 tRNA synthetases class I (R) 98 446 1.3E-168 T 13-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 1.5E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 1.5E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 1.5E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Y11_07081 30d0c8b6d68f2ce431d5579309e6a225 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 1.5E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 900 958 1.2E-16 T 13-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 PRINTS PR00986 Valyl-tRNA synthetase signature 514 532 2.1E-35 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 PRINTS PR00986 Valyl-tRNA synthetase signature 483 504 2.1E-35 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 PRINTS PR00986 Valyl-tRNA synthetase signature 383 396 2.1E-35 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 PRINTS PR00986 Valyl-tRNA synthetase signature 250 267 2.1E-35 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 PRINTS PR00986 Valyl-tRNA synthetase signature 49 60 2.1E-35 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 Gene3D G3DSA:3.40.50.620 382 567 5.0E-42 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 Hamap MF_02004 Valine--tRNA ligase [valS]. 15 963 16.2 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 Gene3D G3DSA:1.10.287.380 891 963 5.7E-19 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 SUPERFAMILY SSF47323 656 913 1.81E-73 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 56 67 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 Pfam PF08264 Anticodon-binding domain of tRNA 688 839 1.4E-44 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 Gene3D G3DSA:3.90.740.10 211 374 8.6E-49 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 SUPERFAMILY SSF46589 898 962 4.81E-16 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 Gene3D G3DSA:3.40.50.620 16 210 5.8E-64 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 Gene3D G3DSA:1.10.730.10 592 831 4.4E-73 T 13-10-2018 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 TIGRFAM TIGR00422 valS: valine--tRNA ligase 16 944 0.0 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 SUPERFAMILY SSF52374 14 655 1.31E-136 T 13-10-2018 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 SUPERFAMILY SSF50677 205 379 1.44E-56 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Y11_37321 21bc7015b6cf8fd50ae96749686a5f7d 965 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 1.1E-230 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_03791 38a0057389240b51959e6b3d0ec2bdde 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 232 3.3E-28 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Y11_03791 38a0057389240b51959e6b3d0ec2bdde 336 SUPERFAMILY SSF51735 1 332 3.42E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_03791 38a0057389240b51959e6b3d0ec2bdde 336 Gene3D G3DSA:3.40.50.720 1 332 7.7E-57 T 13-10-2018 Y11_31131 cc9f786f44f1e99b818acf1cca36bfa3 326 Pfam PF00005 ABC transporter 24 181 3.3E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_31131 cc9f786f44f1e99b818acf1cca36bfa3 326 SMART SM00382 32 231 2.7E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_31131 cc9f786f44f1e99b818acf1cca36bfa3 326 Gene3D G3DSA:3.40.50.300 1 321 1.6E-93 T 13-10-2018 Y11_31131 cc9f786f44f1e99b818acf1cca36bfa3 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_31131 cc9f786f44f1e99b818acf1cca36bfa3 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 8.2E-19 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Y11_31131 cc9f786f44f1e99b818acf1cca36bfa3 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 315 1.0E-25 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Y11_31131 cc9f786f44f1e99b818acf1cca36bfa3 326 SUPERFAMILY SSF52540 3 253 5.68E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_29491 fd8e259608624ff7314d1838d90a0be9 229 SMART SM00345 18 77 9.3E-19 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_29491 fd8e259608624ff7314d1838d90a0be9 229 Gene3D G3DSA:1.20.120.530 101 227 3.7E-21 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Y11_29491 fd8e259608624ff7314d1838d90a0be9 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 77 4.1E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_29491 fd8e259608624ff7314d1838d90a0be9 229 SMART SM00895 106 227 4.9E-17 T 13-10-2018 IPR011711 GntR, C-terminal Y11_29491 fd8e259608624ff7314d1838d90a0be9 229 Pfam PF07729 FCD domain 110 221 2.8E-21 T 13-10-2018 IPR011711 GntR, C-terminal Y11_29491 fd8e259608624ff7314d1838d90a0be9 229 Gene3D G3DSA:1.10.10.10 1 79 3.9E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_29491 fd8e259608624ff7314d1838d90a0be9 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.6E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_29491 fd8e259608624ff7314d1838d90a0be9 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.6E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_29491 fd8e259608624ff7314d1838d90a0be9 229 SUPERFAMILY SSF46785 10 81 1.11E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_29491 fd8e259608624ff7314d1838d90a0be9 229 SUPERFAMILY SSF48008 107 222 1.46E-21 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Y11_30321 d5c2f6fb9368363eecf57a9a2a38c8c1 304 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.369 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_30321 d5c2f6fb9368363eecf57a9a2a38c8c1 304 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 1.0E-174 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_30321 d5c2f6fb9368363eecf57a9a2a38c8c1 304 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 1.9E-149 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_30321 d5c2f6fb9368363eecf57a9a2a38c8c1 304 Gene3D G3DSA:3.30.930.10 1 214 2.9E-110 T 13-10-2018 Y11_30321 d5c2f6fb9368363eecf57a9a2a38c8c1 304 Gene3D G3DSA:1.20.58.180 215 297 1.2E-33 T 13-10-2018 Y11_30321 d5c2f6fb9368363eecf57a9a2a38c8c1 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.1E-71 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_30321 d5c2f6fb9368363eecf57a9a2a38c8c1 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.1E-71 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_30321 d5c2f6fb9368363eecf57a9a2a38c8c1 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.1E-71 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_30321 d5c2f6fb9368363eecf57a9a2a38c8c1 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.1E-71 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_30321 d5c2f6fb9368363eecf57a9a2a38c8c1 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.1E-71 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_30321 d5c2f6fb9368363eecf57a9a2a38c8c1 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.1E-71 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_30321 d5c2f6fb9368363eecf57a9a2a38c8c1 304 SUPERFAMILY SSF55681 8 292 1.49E-133 T 13-10-2018 Y11_24481 e2d0948d7a6f5e440983831bbe4d264c 253 Pfam PF12833 Helix-turn-helix domain 173 249 1.8E-10 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_24481 e2d0948d7a6f5e440983831bbe4d264c 253 SMART SM00342 167 249 9.3E-24 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_24481 e2d0948d7a6f5e440983831bbe4d264c 253 SUPERFAMILY SSF46689 202 249 1.03E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_24481 e2d0948d7a6f5e440983831bbe4d264c 253 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 203 245 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Y11_24481 e2d0948d7a6f5e440983831bbe4d264c 253 Gene3D G3DSA:1.10.10.60 148 253 1.3E-21 T 13-10-2018 Y11_38281 aff0b30d35a2841b3d2eb46d1396fa88 238 Pfam PF00072 Response regulator receiver domain 6 113 2.6E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_38281 aff0b30d35a2841b3d2eb46d1396fa88 238 SUPERFAMILY SSF52172 2 125 1.32E-35 T 13-10-2018 IPR011006 CheY-like superfamily Y11_38281 aff0b30d35a2841b3d2eb46d1396fa88 238 SMART SM00862 156 232 2.1E-14 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_38281 aff0b30d35a2841b3d2eb46d1396fa88 238 Gene3D G3DSA:1.10.10.10 126 236 1.1E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_38281 aff0b30d35a2841b3d2eb46d1396fa88 238 Gene3D G3DSA:3.40.50.2300 1 123 8.7E-33 T 13-10-2018 Y11_38281 aff0b30d35a2841b3d2eb46d1396fa88 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 7.3E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_38281 aff0b30d35a2841b3d2eb46d1396fa88 238 SUPERFAMILY SSF46894 137 234 2.72E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_38281 aff0b30d35a2841b3d2eb46d1396fa88 238 SMART SM00448 4 114 2.6E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_10501 3552a021dea9d33d25f29719f2de3b6f 246 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 234 1.5E-53 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Y11_10501 3552a021dea9d33d25f29719f2de3b6f 246 Gene3D G3DSA:3.20.20.70 2 244 1.3E-85 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_10501 3552a021dea9d33d25f29719f2de3b6f 246 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 13-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Y11_10501 3552a021dea9d33d25f29719f2de3b6f 246 SMART SM00934 16 237 3.6E-101 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Y11_10501 3552a021dea9d33d25f29719f2de3b6f 246 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 39.858 T 13-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Y11_10501 3552a021dea9d33d25f29719f2de3b6f 246 SUPERFAMILY SSF51366 14 240 2.77E-80 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Y11_10501 3552a021dea9d33d25f29719f2de3b6f 246 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 18 236 1.2E-55 T 13-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Y11_06001 15b5961e3ca784d6a5db72ee3dab47ed 467 SUPERFAMILY SSF55785 177 290 4.79E-13 T 13-10-2018 IPR035965 PAS domain superfamily Y11_06001 15b5961e3ca784d6a5db72ee3dab47ed 467 Pfam PF13426 PAS domain 53 153 1.7E-14 T 13-10-2018 IPR000014 PAS domain Y11_06001 15b5961e3ca784d6a5db72ee3dab47ed 467 Pfam PF00990 Diguanylate cyclase, GGDEF domain 299 460 2.6E-47 T 13-10-2018 IPR000160 GGDEF domain Y11_06001 15b5961e3ca784d6a5db72ee3dab47ed 467 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 51 156 1.3E-18 T 13-10-2018 IPR000014 PAS domain Y11_06001 15b5961e3ca784d6a5db72ee3dab47ed 467 SUPERFAMILY SSF55073 304 462 4.71E-44 T 13-10-2018 IPR029787 Nucleotide cyclase Y11_06001 15b5961e3ca784d6a5db72ee3dab47ed 467 SMART SM00086 112 154 5.2E-6 T 13-10-2018 IPR001610 PAC motif Y11_06001 15b5961e3ca784d6a5db72ee3dab47ed 467 SMART SM00086 247 288 150.0 T 13-10-2018 IPR001610 PAC motif Y11_06001 15b5961e3ca784d6a5db72ee3dab47ed 467 Gene3D G3DSA:3.30.450.20 35 169 1.5E-25 T 13-10-2018 Y11_06001 15b5961e3ca784d6a5db72ee3dab47ed 467 Gene3D G3DSA:3.30.450.20 170 285 4.6E-17 T 13-10-2018 Y11_06001 15b5961e3ca784d6a5db72ee3dab47ed 467 Gene3D G3DSA:3.30.70.270 286 465 5.0E-54 T 13-10-2018 Y11_06001 15b5961e3ca784d6a5db72ee3dab47ed 467 Pfam PF08447 PAS fold 194 278 2.0E-8 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Y11_06001 15b5961e3ca784d6a5db72ee3dab47ed 467 SMART SM00091 40 107 2.2E-5 T 13-10-2018 IPR000014 PAS domain Y11_06001 15b5961e3ca784d6a5db72ee3dab47ed 467 SMART SM00091 166 241 1.5 T 13-10-2018 IPR000014 PAS domain Y11_06001 15b5961e3ca784d6a5db72ee3dab47ed 467 SUPERFAMILY SSF55785 53 162 1.12E-19 T 13-10-2018 IPR035965 PAS domain superfamily Y11_06001 15b5961e3ca784d6a5db72ee3dab47ed 467 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 295 463 1.3E-50 T 13-10-2018 IPR000160 GGDEF domain Y11_06001 15b5961e3ca784d6a5db72ee3dab47ed 467 SMART SM00267 288 464 1.4E-60 T 13-10-2018 IPR000160 GGDEF domain Y11_40261 42ecb227f2889ab2191411285e7c47f0 101 Pfam PF13591 MerR HTH family regulatory protein 9 92 4.6E-25 T 13-10-2018 Y11_40261 42ecb227f2889ab2191411285e7c47f0 101 Gene3D G3DSA:1.10.1660.10 1 100 7.3E-29 T 13-10-2018 Y11_18491 aed3b0e70fe9b10f92178caf17c34b97 142 Gene3D G3DSA:3.30.420.270 60 133 1.3E-25 T 13-10-2018 Y11_18491 aed3b0e70fe9b10f92178caf17c34b97 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 5.4E-25 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Y11_18491 aed3b0e70fe9b10f92178caf17c34b97 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 4.7E-39 T 13-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 Y11_18491 aed3b0e70fe9b10f92178caf17c34b97 142 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 6 140 28.222 T 13-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 Y11_03201 f950383f3652921834a14939acf2fdc1 826 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 62 823 0.0 T 13-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 Y11_03201 f950383f3652921834a14939acf2fdc1 826 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 506 523 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Y11_03201 f950383f3652921834a14939acf2fdc1 826 SUPERFAMILY SSF53706 63 683 7.72E-171 T 13-10-2018 Y11_03201 f950383f3652921834a14939acf2fdc1 826 SUPERFAMILY SSF50692 676 820 4.52E-38 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Y11_03201 f950383f3652921834a14939acf2fdc1 826 Gene3D G3DSA:3.40.50.740 105 572 3.1E-235 T 13-10-2018 Y11_03201 f950383f3652921834a14939acf2fdc1 826 Gene3D G3DSA:2.40.40.20 657 820 3.0E-49 T 13-10-2018 Y11_03201 f950383f3652921834a14939acf2fdc1 826 Gene3D G3DSA:3.90.55.10 61 623 3.1E-235 T 13-10-2018 Y11_03201 f950383f3652921834a14939acf2fdc1 826 Pfam PF00384 Molybdopterin oxidoreductase 105 563 6.9E-94 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_03201 f950383f3652921834a14939acf2fdc1 826 Gene3D G3DSA:3.40.228.10 198 649 3.1E-235 T 13-10-2018 Y11_03201 f950383f3652921834a14939acf2fdc1 826 Pfam PF01568 Molydopterin dinucleotide binding domain 683 797 4.0E-24 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Y11_10451 49d6520524d0cf09c2248a0912189b16 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 5.8E-128 T 13-10-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 Y11_10451 49d6520524d0cf09c2248a0912189b16 231 SMART SM01007 7 198 1.1E-67 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal Y11_10451 49d6520524d0cf09c2248a0912189b16 231 SUPERFAMILY SSF53639 1 223 3.73E-68 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Y11_10451 49d6520524d0cf09c2248a0912189b16 231 Gene3D G3DSA:3.40.225.10 1 231 4.9E-61 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Y11_10451 49d6520524d0cf09c2248a0912189b16 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 9.8E-45 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal Y11_39361 2b815c846bef61077302afd0cacb8c0d 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Y11_39361 2b815c846bef61077302afd0cacb8c0d 865 Gene3D G3DSA:3.30.499.10 683 865 9.0E-76 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Y11_39361 2b815c846bef61077302afd0cacb8c0d 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.9E-40 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_39361 2b815c846bef61077302afd0cacb8c0d 865 PIRSF PIRSF036687 1 859 0.0 T 13-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Y11_39361 2b815c846bef61077302afd0cacb8c0d 865 Gene3D G3DSA:3.30.499.10 402 529 1.8E-152 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Y11_39361 2b815c846bef61077302afd0cacb8c0d 865 Gene3D G3DSA:1.25.40.310 1 161 3.0E-74 T 13-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Y11_39361 2b815c846bef61077302afd0cacb8c0d 865 Gene3D G3DSA:3.40.1060.10 385 681 1.8E-152 T 13-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Y11_39361 2b815c846bef61077302afd0cacb8c0d 865 SUPERFAMILY SSF52016 162 370 4.12E-71 T 13-10-2018 Y11_39361 2b815c846bef61077302afd0cacb8c0d 865 Gene3D G3DSA:3.20.19.10 162 361 1.0E-79 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Y11_39361 2b815c846bef61077302afd0cacb8c0d 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 2.8E-96 T 13-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Y11_39361 2b815c846bef61077302afd0cacb8c0d 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 13-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Y11_39361 2b815c846bef61077302afd0cacb8c0d 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Y11_39361 2b815c846bef61077302afd0cacb8c0d 865 SUPERFAMILY SSF74778 2 160 1.44E-68 T 13-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Y11_39361 2b815c846bef61077302afd0cacb8c0d 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 5.1E-67 T 13-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Y11_39361 2b815c846bef61077302afd0cacb8c0d 865 SUPERFAMILY SSF53732 379 859 4.45E-151 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Y11_08351 73dcbda2dc9d6bf9aedef1bf9cf6d10b 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 2.4E-26 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y11_08351 73dcbda2dc9d6bf9aedef1bf9cf6d10b 135 Gene3D G3DSA:3.10.180.10 1 131 3.9E-49 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y11_08351 73dcbda2dc9d6bf9aedef1bf9cf6d10b 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Y11_08351 73dcbda2dc9d6bf9aedef1bf9cf6d10b 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 4.5E-67 T 13-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Y11_08351 73dcbda2dc9d6bf9aedef1bf9cf6d10b 135 SUPERFAMILY SSF54593 1 128 2.42E-35 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y11_17281 d0159cb39aa15d46dca4250aa79dd2dc 420 Gene3D G3DSA:2.40.420.20 344 405 9.3E-31 T 13-10-2018 Y11_17281 d0159cb39aa15d46dca4250aa79dd2dc 420 Gene3D G3DSA:2.40.30.170 71 342 9.3E-31 T 13-10-2018 Y11_17281 d0159cb39aa15d46dca4250aa79dd2dc 420 Gene3D G3DSA:1.10.287.470 108 235 9.3E-31 T 13-10-2018 Y11_17281 d0159cb39aa15d46dca4250aa79dd2dc 420 Gene3D G3DSA:2.40.50.100 74 269 9.3E-31 T 13-10-2018 Y11_17281 d0159cb39aa15d46dca4250aa79dd2dc 420 Pfam PF13437 HlyD family secretion protein 235 319 4.1E-9 T 13-10-2018 Y11_37821 5abb17801771abe248628de3679dc099 639 Gene3D G3DSA:3.30.450.40 1 186 7.7E-52 T 13-10-2018 IPR029016 GAF-like domain superfamily Y11_37821 5abb17801771abe248628de3679dc099 639 Gene3D G3DSA:1.10.10.60 583 626 2.3E-10 T 13-10-2018 Y11_37821 5abb17801771abe248628de3679dc099 639 SMART SM00091 199 267 0.0024 T 13-10-2018 IPR000014 PAS domain Y11_37821 5abb17801771abe248628de3679dc099 639 Pfam PF02954 Bacterial regulatory protein, Fis family 584 622 4.3E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Y11_37821 5abb17801771abe248628de3679dc099 639 SUPERFAMILY SSF46689 532 626 5.02E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_37821 5abb17801771abe248628de3679dc099 639 Pfam PF00158 Sigma-54 interaction domain 327 486 1.4E-38 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Y11_37821 5abb17801771abe248628de3679dc099 639 Gene3D G3DSA:3.40.50.300 313 491 5.2E-46 T 13-10-2018 Y11_37821 5abb17801771abe248628de3679dc099 639 Gene3D G3DSA:3.30.450.20 209 312 4.0E-21 T 13-10-2018 Y11_37821 5abb17801771abe248628de3679dc099 639 Pfam PF00989 PAS fold 200 300 4.6E-10 T 13-10-2018 IPR013767 PAS fold GO:0006355 Y11_37821 5abb17801771abe248628de3679dc099 639 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 347 360 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y11_37821 5abb17801771abe248628de3679dc099 639 Gene3D G3DSA:1.10.8.60 492 566 1.2E-16 T 13-10-2018 Y11_37821 5abb17801771abe248628de3679dc099 639 SUPERFAMILY SSF55785 195 298 6.81E-9 T 13-10-2018 IPR035965 PAS domain superfamily Y11_37821 5abb17801771abe248628de3679dc099 639 SUPERFAMILY SSF52540 328 563 1.61E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_19951 f31850c0d877b715ea71c39860273145 247 Gene3D G3DSA:3.40.50.2000 43 229 1.3E-55 T 13-10-2018 Y11_19951 f31850c0d877b715ea71c39860273145 247 Pfam PF00534 Glycosyl transferases group 1 55 224 9.0E-34 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Y11_19951 f31850c0d877b715ea71c39860273145 247 SUPERFAMILY SSF53756 4 244 2.92E-59 T 13-10-2018 Y11_19951 f31850c0d877b715ea71c39860273145 247 Gene3D G3DSA:3.40.50.2000 3 238 1.3E-55 T 13-10-2018 Y11_23811 d6c7986da71c876a1e941ec2f6ff1249 318 Gene3D G3DSA:3.40.50.2300 146 274 9.6E-76 T 13-10-2018 Y11_23811 d6c7986da71c876a1e941ec2f6ff1249 318 SUPERFAMILY SSF53822 48 312 3.99E-72 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_23811 d6c7986da71c876a1e941ec2f6ff1249 318 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 35 2.1E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_23811 d6c7986da71c876a1e941ec2f6ff1249 318 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 47 252 3.2E-35 T 13-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain Y11_23811 d6c7986da71c876a1e941ec2f6ff1249 318 Gene3D G3DSA:1.10.260.40 1 46 1.7E-13 T 13-10-2018 Y11_23811 d6c7986da71c876a1e941ec2f6ff1249 318 SUPERFAMILY SSF47413 2 46 4.88E-8 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_23811 d6c7986da71c876a1e941ec2f6ff1249 318 SMART SM00354 1 58 3.8E-11 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_23811 d6c7986da71c876a1e941ec2f6ff1249 318 Gene3D G3DSA:3.40.50.2300 50 288 9.6E-76 T 13-10-2018 Y11_05331 837aa6519e5608eec60e593f559b91d6 212 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 13-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Y11_05331 837aa6519e5608eec60e593f559b91d6 212 Gene3D G3DSA:3.40.50.300 1 210 2.3E-63 T 13-10-2018 Y11_05331 837aa6519e5608eec60e593f559b91d6 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 28.493 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Y11_05331 837aa6519e5608eec60e593f559b91d6 212 SUPERFAMILY SSF52540 1 206 4.87E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_05331 837aa6519e5608eec60e593f559b91d6 212 Pfam PF02223 Thymidylate kinase 8 198 7.9E-61 T 13-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Y11_05331 837aa6519e5608eec60e593f559b91d6 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 6.9E-64 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Y11_29361 1d8e8a347a87cbb34de482d517d62119 349 Gene3D G3DSA:3.30.450.20 9 112 1.1E-16 T 13-10-2018 Y11_29361 1d8e8a347a87cbb34de482d517d62119 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 190 3.3E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_29361 1d8e8a347a87cbb34de482d517d62119 349 Gene3D G3DSA:3.30.565.10 192 348 8.9E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_29361 1d8e8a347a87cbb34de482d517d62119 349 SMART SM00388 129 194 1.6E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_29361 1d8e8a347a87cbb34de482d517d62119 349 SUPERFAMILY SSF47384 121 190 1.28E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_29361 1d8e8a347a87cbb34de482d517d62119 349 Pfam PF00989 PAS fold 12 98 6.2E-5 T 13-10-2018 IPR013767 PAS fold GO:0006355 Y11_29361 1d8e8a347a87cbb34de482d517d62119 349 SMART SM00091 7 75 7.6E-4 T 13-10-2018 IPR000014 PAS domain Y11_29361 1d8e8a347a87cbb34de482d517d62119 349 SMART SM00387 233 349 1.6E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_29361 1d8e8a347a87cbb34de482d517d62119 349 Gene3D G3DSA:1.10.287.130 116 191 4.6E-14 T 13-10-2018 Y11_29361 1d8e8a347a87cbb34de482d517d62119 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 4.0E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_29361 1d8e8a347a87cbb34de482d517d62119 349 SUPERFAMILY SSF55874 198 346 4.06E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_29361 1d8e8a347a87cbb34de482d517d62119 349 SUPERFAMILY SSF55785 12 97 1.14E-5 T 13-10-2018 IPR035965 PAS domain superfamily Y11_29361 1d8e8a347a87cbb34de482d517d62119 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 2.6E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_29361 1d8e8a347a87cbb34de482d517d62119 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 2.6E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_29361 1d8e8a347a87cbb34de482d517d62119 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 2.6E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_07711 b4c541a80ba674848a9836703e4c9b34 294 Gene3D G3DSA:1.10.3470.10 37 269 1.6E-8 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_07711 b4c541a80ba674848a9836703e4c9b34 294 Pfam PF00950 ABC 3 transport family 10 265 6.0E-90 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Y11_07711 b4c541a80ba674848a9836703e4c9b34 294 SUPERFAMILY SSF81345 5 261 6.8E-39 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_29741 660d4468ee5d025387bd263da2f0918e 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 2.0E-111 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29741 660d4468ee5d025387bd263da2f0918e 287 Gene3D G3DSA:1.10.287.80 6 283 2.0E-112 T 13-10-2018 Y11_29741 660d4468ee5d025387bd263da2f0918e 287 SUPERFAMILY SSF52943 2 287 1.83E-96 T 13-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29741 660d4468ee5d025387bd263da2f0918e 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.364 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29741 660d4468ee5d025387bd263da2f0918e 287 Gene3D G3DSA:3.40.1380.10 61 206 2.0E-112 T 13-10-2018 Y11_29741 660d4468ee5d025387bd263da2f0918e 287 Pfam PF00231 ATP synthase 5 286 4.7E-96 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29741 660d4468ee5d025387bd263da2f0918e 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 13-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29741 660d4468ee5d025387bd263da2f0918e 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 3.0E-38 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29741 660d4468ee5d025387bd263da2f0918e 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 3.0E-38 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29741 660d4468ee5d025387bd263da2f0918e 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 3.0E-38 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29741 660d4468ee5d025387bd263da2f0918e 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 3.0E-38 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_10311 23c5e8919b5f8c7d4264217ae7eaf628 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 3.5E-7 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Y11_10311 23c5e8919b5f8c7d4264217ae7eaf628 213 Gene3D G3DSA:1.10.340.30 21 132 4.5E-77 T 13-10-2018 Y11_10311 23c5e8919b5f8c7d4264217ae7eaf628 213 Gene3D G3DSA:1.10.1670.10 11 203 4.5E-77 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Y11_10311 23c5e8919b5f8c7d4264217ae7eaf628 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.796 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Y11_10311 23c5e8919b5f8c7d4264217ae7eaf628 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Y11_10311 23c5e8919b5f8c7d4264217ae7eaf628 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.1E-19 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Y11_10311 23c5e8919b5f8c7d4264217ae7eaf628 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 5.2E-87 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Y11_10311 23c5e8919b5f8c7d4264217ae7eaf628 213 SMART SM00478 38 185 2.1E-53 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Y11_10311 23c5e8919b5f8c7d4264217ae7eaf628 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Y11_10311 23c5e8919b5f8c7d4264217ae7eaf628 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Y11_10311 23c5e8919b5f8c7d4264217ae7eaf628 213 PIRSF PIRSF001435 1 211 3.0E-50 T 13-10-2018 Y11_10311 23c5e8919b5f8c7d4264217ae7eaf628 213 SUPERFAMILY SSF48150 2 207 5.02E-72 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Y11_10311 23c5e8919b5f8c7d4264217ae7eaf628 213 SMART SM00525 186 206 4.4E-5 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Y11_07451 c0804150da0fe569d413d39c5f9d4ac6 283 SMART SM00644 36 182 4.8E-28 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Y11_07451 c0804150da0fe569d413d39c5f9d4ac6 283 Gene3D G3DSA:1.10.101.10 197 280 1.6E-29 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Y11_07451 c0804150da0fe569d413d39c5f9d4ac6 283 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 45 183 1.9E-28 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Y11_07451 c0804150da0fe569d413d39c5f9d4ac6 283 Gene3D G3DSA:3.40.80.10 46 196 1.7E-49 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Y11_07451 c0804150da0fe569d413d39c5f9d4ac6 283 SUPERFAMILY SSF55846 29 198 1.44E-53 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Y11_07451 c0804150da0fe569d413d39c5f9d4ac6 283 Pfam PF01471 Putative peptidoglycan binding domain 216 269 3.0E-10 T 13-10-2018 IPR002477 Peptidoglycan binding-like Y11_07451 c0804150da0fe569d413d39c5f9d4ac6 283 SUPERFAMILY SSF47090 201 280 2.67E-22 T 13-10-2018 IPR036365 PGBD-like superfamily Y11_03851 5847715f921f78030ccd05fbe949c6eb 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 20.765 T 13-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Y11_03851 5847715f921f78030ccd05fbe949c6eb 550 Gene3D G3DSA:3.40.50.2030 380 548 9.5E-59 T 13-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Y11_03851 5847715f921f78030ccd05fbe949c6eb 550 SUPERFAMILY SSF56821 1 549 1.83E-188 T 13-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Y11_03851 5847715f921f78030ccd05fbe949c6eb 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 544 7.3E-160 T 13-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Y11_03851 5847715f921f78030ccd05fbe949c6eb 550 Gene3D G3DSA:3.40.50.2030 234 379 1.1E-60 T 13-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Y11_03851 5847715f921f78030ccd05fbe949c6eb 550 Gene3D G3DSA:1.20.1270.20 1 139 3.6E-35 T 13-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Y11_03851 5847715f921f78030ccd05fbe949c6eb 550 Gene3D G3DSA:1.20.1270.20 149 232 7.0E-28 T 13-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Y11_03851 5847715f921f78030ccd05fbe949c6eb 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 3.3E-247 T 13-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Y11_03851 5847715f921f78030ccd05fbe949c6eb 550 PIRSF PIRSF000076 1 550 3.3E-241 T 13-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Y11_21331 95d095d8b9df5a139f6bdf0f7e152b8e 352 Gene3D G3DSA:3.30.70.270 4 164 3.1E-65 T 13-10-2018 Y11_21331 95d095d8b9df5a139f6bdf0f7e152b8e 352 SUPERFAMILY SSF100879 241 349 7.65E-27 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Y11_21331 95d095d8b9df5a139f6bdf0f7e152b8e 352 Gene3D G3DSA:2.30.40.20 21 73 3.1E-65 T 13-10-2018 Y11_21331 95d095d8b9df5a139f6bdf0f7e152b8e 352 Gene3D G3DSA:3.30.1490.100 237 351 4.3E-30 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Y11_21331 95d095d8b9df5a139f6bdf0f7e152b8e 352 Pfam PF11799 impB/mucB/samB family C-terminal domain 234 341 2.5E-9 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Y11_21331 95d095d8b9df5a139f6bdf0f7e152b8e 352 SUPERFAMILY SSF56672 1 234 1.6E-93 T 13-10-2018 Y11_21331 95d095d8b9df5a139f6bdf0f7e152b8e 352 Gene3D G3DSA:1.10.150.20 166 227 2.3E-19 T 13-10-2018 Y11_21331 95d095d8b9df5a139f6bdf0f7e152b8e 352 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 37.341 T 13-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Y11_21331 95d095d8b9df5a139f6bdf0f7e152b8e 352 Pfam PF00817 impB/mucB/samB family 7 154 1.2E-49 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Y11_21331 95d095d8b9df5a139f6bdf0f7e152b8e 352 Pfam PF11798 IMS family HHH motif 167 197 1.5E-8 T 13-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Y11_08961 089b806d949c614a6d48ea21953a70a0 201 SUPERFAMILY SSF52218 1 199 6.81E-59 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_08961 089b806d949c614a6d48ea21953a70a0 201 Pfam PF02525 Flavodoxin-like fold 3 195 4.2E-47 T 13-10-2018 IPR003680 Flavodoxin-like fold Y11_08961 089b806d949c614a6d48ea21953a70a0 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.899 T 13-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 Y11_08961 089b806d949c614a6d48ea21953a70a0 201 Gene3D G3DSA:3.40.50.360 1 201 6.1E-66 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_34171 8586470db2c827487b653e85ed20f4e3 84 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 13-10-2018 IPR001455 TusA-like domain Y11_34171 8586470db2c827487b653e85ed20f4e3 84 Gene3D G3DSA:3.30.110.40 1 81 1.5E-31 T 13-10-2018 IPR036868 TusA-like domain superfamily Y11_34171 8586470db2c827487b653e85ed20f4e3 84 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 29.368 T 13-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 Y11_34171 8586470db2c827487b653e85ed20f4e3 84 Pfam PF01206 Sulfurtransferase TusA 10 79 8.7E-25 T 13-10-2018 IPR001455 TusA-like domain Y11_34171 8586470db2c827487b653e85ed20f4e3 84 SUPERFAMILY SSF64307 4 80 9.29E-27 T 13-10-2018 IPR036868 TusA-like domain superfamily Y11_42251 c834ec98eaf7db38cbb31003386a866e 294 Pfam PF01548 Transposase 52 156 3.0E-12 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_42251 c834ec98eaf7db38cbb31003386a866e 294 Pfam PF02371 Transposase IS116/IS110/IS902 family 219 286 2.3E-16 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_20871 a383a18cbd663368d191684239c997be 378 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 3.0E-93 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Y11_20871 a383a18cbd663368d191684239c997be 378 Gene3D G3DSA:3.20.20.105 1 367 3.4E-171 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Y11_20871 a383a18cbd663368d191684239c997be 378 SUPERFAMILY SSF51713 2 364 6.93E-164 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Y11_20871 a383a18cbd663368d191684239c997be 378 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 1.4E-190 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Y11_20871 a383a18cbd663368d191684239c997be 378 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 367 6.8E-180 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Y11_20871 a383a18cbd663368d191684239c997be 378 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 57.57 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Y11_18401 b2855255b15bc6a755b9dfe78868c9bd 250 SMART SM00855 5 191 1.6E-27 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Y11_18401 b2855255b15bc6a755b9dfe78868c9bd 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 13-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Y11_18401 b2855255b15bc6a755b9dfe78868c9bd 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 9.7E-30 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Y11_18401 b2855255b15bc6a755b9dfe78868c9bd 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 137 221 1.2E-4 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Y11_18401 b2855255b15bc6a755b9dfe78868c9bd 250 SUPERFAMILY SSF53254 4 247 2.36E-78 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Y11_18401 b2855255b15bc6a755b9dfe78868c9bd 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.09 T 13-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 Y11_18401 b2855255b15bc6a755b9dfe78868c9bd 250 Gene3D G3DSA:3.40.50.1240 2 250 1.1E-91 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Y11_18401 b2855255b15bc6a755b9dfe78868c9bd 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 1.2E-126 T 13-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 Y11_18401 b2855255b15bc6a755b9dfe78868c9bd 250 PIRSF PIRSF000709 3 114 9.8E-9 T 13-10-2018 Y11_18401 b2855255b15bc6a755b9dfe78868c9bd 250 PIRSF PIRSF000709 169 237 0.037 T 13-10-2018 Y11_06901 5f19865d06e39e0669dd80d1187ff6aa 237 Gene3D G3DSA:3.40.50.300 15 237 6.1E-68 T 13-10-2018 Y11_06901 5f19865d06e39e0669dd80d1187ff6aa 237 SUPERFAMILY SSF52540 17 233 2.66E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_06901 5f19865d06e39e0669dd80d1187ff6aa 237 Pfam PF00005 ABC transporter 33 178 6.8E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_06901 5f19865d06e39e0669dd80d1187ff6aa 237 SMART SM00382 42 226 3.1E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_06901 5f19865d06e39e0669dd80d1187ff6aa 237 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_05831 a62bbbda82a650b5c2b83a57d772511c 519 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 114 3.8E-11 T 13-10-2018 IPR000014 PAS domain Y11_05831 a62bbbda82a650b5c2b83a57d772511c 519 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 6.6E-51 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_05831 a62bbbda82a650b5c2b83a57d772511c 519 SMART SM00283 269 516 1.1E-76 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_05831 a62bbbda82a650b5c2b83a57d772511c 519 Pfam PF08447 PAS fold 31 114 2.6E-13 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Y11_05831 a62bbbda82a650b5c2b83a57d772511c 519 Gene3D G3DSA:1.10.287.950 216 517 4.6E-78 T 13-10-2018 Y11_05831 a62bbbda82a650b5c2b83a57d772511c 519 Gene3D G3DSA:3.30.450.20 21 145 1.0E-22 T 13-10-2018 Y11_05831 a62bbbda82a650b5c2b83a57d772511c 519 SUPERFAMILY SSF58104 242 515 9.16E-66 T 13-10-2018 Y11_05831 a62bbbda82a650b5c2b83a57d772511c 519 SUPERFAMILY SSF55785 23 114 2.62E-24 T 13-10-2018 IPR035965 PAS domain superfamily Y11_05831 a62bbbda82a650b5c2b83a57d772511c 519 SMART SM00086 80 121 0.0021 T 13-10-2018 IPR001610 PAC motif Y11_05831 a62bbbda82a650b5c2b83a57d772511c 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 3.1E-40 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_05831 a62bbbda82a650b5c2b83a57d772511c 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 3.1E-40 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_05831 a62bbbda82a650b5c2b83a57d772511c 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 3.1E-40 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_05831 a62bbbda82a650b5c2b83a57d772511c 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 3.1E-40 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 PRINTS PR00959 Mevalonate kinase family signature 25 49 4.0E-46 T 13-10-2018 Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 PRINTS PR00959 Mevalonate kinase family signature 328 345 4.0E-46 T 13-10-2018 Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 PRINTS PR00959 Mevalonate kinase family signature 119 141 4.0E-46 T 13-10-2018 Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 PRINTS PR00959 Mevalonate kinase family signature 162 181 4.0E-46 T 13-10-2018 Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 Pfam PF08544 GHMP kinases C terminal 279 361 2.2E-9 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 13-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 Gene3D G3DSA:3.30.230.10 2 205 9.4E-67 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 Pfam PF00288 GHMP kinases N terminal domain 115 181 4.9E-15 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 PRINTS PR00473 Galactokinase signature 263 277 2.5E-29 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 PRINTS PR00473 Galactokinase signature 112 130 2.5E-29 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 PRINTS PR00473 Galactokinase signature 92 103 2.5E-29 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 PRINTS PR00473 Galactokinase signature 27 45 2.5E-29 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 TIGRFAM TIGR00131 gal_kin: galactokinase 5 383 2.1E-153 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 Hamap MF_00246 Galactokinase [galK]. 25 382 42.348 T 13-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 Gene3D G3DSA:3.30.70.890 206 382 9.9E-60 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 PIRSF PIRSF000530 1 383 2.1E-119 T 13-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 Pfam PF10509 Galactokinase galactose-binding signature 11 57 4.5E-22 T 13-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 SUPERFAMILY SSF54211 3 203 3.49E-64 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 13-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 Y11_18331 b622a098a70ea0407f4aaf58b4ef7c0d 383 SUPERFAMILY SSF55060 205 381 2.4E-53 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Y11_37441 0badfc853193254deb484f53d6170152 502 SUPERFAMILY SSF53098 155 277 1.31E-5 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_37441 0badfc853193254deb484f53d6170152 502 Gene3D G3DSA:1.10.10.60 7 41 6.2E-6 T 13-10-2018 Y11_37441 0badfc853193254deb484f53d6170152 502 Pfam PF00665 Integrase core domain 132 254 2.6E-16 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_27661 4504b86bc617d41cddac1ee4c955681f 288 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 13-10-2018 IPR030470 UbiA prenyltransferase conserved site Y11_27661 4504b86bc617d41cddac1ee4c955681f 288 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 10 287 4.3E-109 T 13-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Y11_27661 4504b86bc617d41cddac1ee4c955681f 288 Gene3D G3DSA:1.20.120.1780 171 288 7.1E-15 T 13-10-2018 Y11_27661 4504b86bc617d41cddac1ee4c955681f 288 Pfam PF01040 UbiA prenyltransferase family 28 270 7.9E-66 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Y11_27661 4504b86bc617d41cddac1ee4c955681f 288 Gene3D G3DSA:1.10.357.140 23 170 1.4E-40 T 13-10-2018 Y11_27661 4504b86bc617d41cddac1ee4c955681f 288 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.233 T 13-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Y11_31661 6594e4c43ac13458178da9acd69d3c82 501 SUPERFAMILY SSF53720 3 485 6.54E-142 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Y11_31661 6594e4c43ac13458178da9acd69d3c82 501 Pfam PF00171 Aldehyde dehydrogenase family 16 480 7.6E-137 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Y11_31661 6594e4c43ac13458178da9acd69d3c82 501 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 4 485 2.5E-200 T 13-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 Y11_31661 6594e4c43ac13458178da9acd69d3c82 501 Gene3D G3DSA:3.40.309.10 249 454 1.5E-147 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Y11_31661 6594e4c43ac13458178da9acd69d3c82 501 Gene3D G3DSA:3.40.605.10 24 462 1.5E-147 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 Gene3D G3DSA:3.30.450.40 192 363 1.0E-23 T 13-10-2018 IPR029016 GAF-like domain superfamily Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 Gene3D G3DSA:1.10.10.60 650 711 2.2E-8 T 13-10-2018 Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 601 610 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 Pfam PF00158 Sigma-54 interaction domain 388 554 4.1E-70 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 SMART SM00065 32 180 0.017 T 13-10-2018 IPR003018 GAF domain GO:0005515 Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 SMART SM00065 208 362 9.3E-17 T 13-10-2018 IPR003018 GAF domain GO:0005515 Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 Gene3D G3DSA:3.40.50.300 375 558 2.1E-64 T 13-10-2018 Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 474 489 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 Gene3D G3DSA:3.30.450.40 14 184 7.7E-12 T 13-10-2018 IPR029016 GAF-like domain superfamily Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 SMART SM00382 408 552 8.0E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 Pfam PF01590 GAF domain 209 352 1.6E-11 T 13-10-2018 IPR003018 GAF domain GO:0005515 Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 SUPERFAMILY SSF46689 601 707 1.52E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 412 425 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 SUPERFAMILY SSF55781 16 187 1.72E-13 T 13-10-2018 Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 SUPERFAMILY SSF55781 189 365 6.76E-22 T 13-10-2018 Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 Gene3D G3DSA:1.10.8.60 559 625 8.8E-24 T 13-10-2018 Y11_17141 e9ebbed4468e417cfda3d6b7df9674eb 719 SUPERFAMILY SSF52540 387 624 1.69E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_10861 9b3abff6f85bea4b5c6d4ffc05b78e75 180 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 8.3E-71 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Y11_10861 9b3abff6f85bea4b5c6d4ffc05b78e75 180 Pfam PF04279 Intracellular septation protein A 1 175 1.7E-71 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Y11_10861 9b3abff6f85bea4b5c6d4ffc05b78e75 180 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.622 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Y11_24551 8156c9946f9700ecddae5af62c247831 221 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 23 213 7.1E-51 T 13-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like Y11_24551 8156c9946f9700ecddae5af62c247831 221 SUPERFAMILY SSF51197 18 214 7.69E-58 T 13-10-2018 Y11_24551 8156c9946f9700ecddae5af62c247831 221 Gene3D G3DSA:2.60.120.590 15 219 4.3E-56 T 13-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily Y11_22351 e7bbf5a7c5ba2b6b8e05746d805f3c8c 212 SUPERFAMILY SSF52172 17 193 4.14E-35 T 13-10-2018 IPR011006 CheY-like superfamily Y11_22351 e7bbf5a7c5ba2b6b8e05746d805f3c8c 212 SMART SM01012 138 193 5.6E-13 T 13-10-2018 IPR005561 ANTAR domain GO:0003723 Y11_22351 e7bbf5a7c5ba2b6b8e05746d805f3c8c 212 PIRSF PIRSF036382 9 200 1.1E-36 T 13-10-2018 IPR008327 Signal transduction response regulator, antiterminator Y11_22351 e7bbf5a7c5ba2b6b8e05746d805f3c8c 212 Gene3D G3DSA:1.10.10.10 141 198 3.2E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_22351 e7bbf5a7c5ba2b6b8e05746d805f3c8c 212 Pfam PF03861 ANTAR domain 141 193 3.5E-11 T 13-10-2018 IPR005561 ANTAR domain GO:0003723 Y11_22351 e7bbf5a7c5ba2b6b8e05746d805f3c8c 212 Gene3D G3DSA:3.40.50.2300 10 131 3.9E-35 T 13-10-2018 Y11_33521 c316c0cf823d01d156b5d8ae86c54253 84 SUPERFAMILY SSF47345 4 84 1.11E-31 T 13-10-2018 IPR035900 Colicin E immunity protein superfamily Y11_33521 c316c0cf823d01d156b5d8ae86c54253 84 Gene3D G3DSA:1.10.1200.20 1 84 7.2E-34 T 13-10-2018 IPR035900 Colicin E immunity protein superfamily Y11_33521 c316c0cf823d01d156b5d8ae86c54253 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 3 21 1.1E-24 T 13-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 Y11_33521 c316c0cf823d01d156b5d8ae86c54253 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 62 83 1.1E-24 T 13-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 Y11_33521 c316c0cf823d01d156b5d8ae86c54253 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 39 55 1.1E-24 T 13-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 Y11_33521 c316c0cf823d01d156b5d8ae86c54253 84 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 8 83 2.0E-32 T 13-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 Y11_33521 c316c0cf823d01d156b5d8ae86c54253 84 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 3 83 3.7E-34 T 13-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 Y11_31561 a77696ad74e37e842dccb422c59fe73d 237 SUPERFAMILY SSF54211 4 101 1.29E-14 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_31561 a77696ad74e37e842dccb422c59fe73d 237 Gene3D G3DSA:3.30.230.10 1 93 9.3E-13 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y11_31561 a77696ad74e37e842dccb422c59fe73d 237 Pfam PF00288 GHMP kinases N terminal domain 24 71 9.8E-9 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Y11_00171 af6feb879984a3eea0e80ec8bd91b991 149 Pfam PF03245 Bacteriophage Rz lysis protein 37 147 6.8E-38 T 13-10-2018 IPR004929 Spanin, inner membrane subunit GO:0019076|GO:0019835 Y11_04381 15f442938cbc9261770c0ea35606ed91 1481 Gene3D G3DSA:1.20.58.850 581 852 1.2E-138 T 13-10-2018 Y11_04381 15f442938cbc9261770c0ea35606ed91 1481 Gene3D G3DSA:3.40.1140.10 1383 1468 2.8E-38 T 13-10-2018 Y11_04381 15f442938cbc9261770c0ea35606ed91 1481 SUPERFAMILY SSF52540 22 224 8.77E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_04381 15f442938cbc9261770c0ea35606ed91 1481 Pfam PF16330 MukB hinge domain 645 810 2.5E-73 T 13-10-2018 IPR032520 MukB, hinge domain Y11_04381 15f442938cbc9261770c0ea35606ed91 1481 Gene3D G3DSA:1.20.1060.30 667 778 1.2E-138 T 13-10-2018 Y11_04381 15f442938cbc9261770c0ea35606ed91 1481 PIRSF PIRSF005246 1 1478 0.0 T 13-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 Y11_04381 15f442938cbc9261770c0ea35606ed91 1481 Gene3D G3DSA:3.40.1140.10 1 227 2.7E-102 T 13-10-2018 Y11_04381 15f442938cbc9261770c0ea35606ed91 1481 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 4.5E-15 T 13-10-2018 Y11_04381 15f442938cbc9261770c0ea35606ed91 1481 Gene3D G3DSA:1.20.58.850 620 830 1.2E-138 T 13-10-2018 Y11_04381 15f442938cbc9261770c0ea35606ed91 1481 SUPERFAMILY SSF52540 21 1433 9.08E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_04381 15f442938cbc9261770c0ea35606ed91 1481 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.069 T 13-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 Y11_04381 15f442938cbc9261770c0ea35606ed91 1481 Pfam PF04310 MukB N-terminal 2 227 3.9E-124 T 13-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 Y11_21651 939c6877e4cb4a3cfe2c337692bf35fa 416 SUPERFAMILY SSF53383 13 395 4.03E-90 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_21651 939c6877e4cb4a3cfe2c337692bf35fa 416 PIRSF PIRSF000524 12 416 1.9E-104 T 13-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Y11_21651 939c6877e4cb4a3cfe2c337692bf35fa 416 Gene3D G3DSA:3.90.1150.10 18 388 5.7E-136 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_21651 939c6877e4cb4a3cfe2c337692bf35fa 416 Pfam PF00266 Aminotransferase class-V 20 356 9.3E-25 T 13-10-2018 IPR000192 Aminotransferase class V domain Y11_21651 939c6877e4cb4a3cfe2c337692bf35fa 416 Gene3D G3DSA:3.40.640.10 29 290 5.7E-136 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_28011 9229320247b79112a9e6910b9ad18c96 230 SUPERFAMILY SSF54621 3 200 7.59E-8 T 13-10-2018 IPR036912 Haem-binding HasA superfamily Y11_28011 9229320247b79112a9e6910b9ad18c96 230 Gene3D G3DSA:3.30.1500.10 1 218 5.9E-60 T 13-10-2018 IPR036912 Haem-binding HasA superfamily Y11_28011 9229320247b79112a9e6910b9ad18c96 230 Pfam PF06438 Heme-binding protein A (HasA) 1 230 3.9E-48 T 13-10-2018 IPR010495 Haem-binding HasA Y11_16331 a68efc380bf8a8f2cb0d4ed9a374b3b7 144 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 142 2.3E-55 T 13-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Y11_16331 a68efc380bf8a8f2cb0d4ed9a374b3b7 144 Gene3D G3DSA:3.40.50.300 1 143 7.2E-15 T 13-10-2018 Y11_16331 a68efc380bf8a8f2cb0d4ed9a374b3b7 144 PIRSF PIRSF036409 1 144 1.5E-52 T 13-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Y11_16331 a68efc380bf8a8f2cb0d4ed9a374b3b7 144 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 2 142 1.3E-51 T 13-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Y11_16331 a68efc380bf8a8f2cb0d4ed9a374b3b7 144 SUPERFAMILY SSF52540 3 141 1.21E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_27941 83bc688d66125db440e3f4fd575952ac 466 Gene3D G3DSA:3.50.50.60 7 332 1.8E-94 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_27941 83bc688d66125db440e3f4fd575952ac 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 66.316 T 13-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 Gene3D G3DSA:3.50.50.60 158 276 1.8E-94 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_27941 83bc688d66125db440e3f4fd575952ac 466 PIRSF PIRSF000350 1 463 1.6E-71 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 326 1.4E-58 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.1E-27 T 13-10-2018 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 2.1E-27 T 13-10-2018 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.1E-27 T 13-10-2018 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.1E-27 T 13-10-2018 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.1E-27 T 13-10-2018 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 SUPERFAMILY SSF55424 345 463 4.47E-30 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 Gene3D G3DSA:3.30.390.30 345 464 6.8E-32 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.3E-52 T 13-10-2018 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.3E-52 T 13-10-2018 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.3E-52 T 13-10-2018 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.3E-52 T 13-10-2018 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.3E-52 T 13-10-2018 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.3E-52 T 13-10-2018 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.3E-52 T 13-10-2018 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.3E-52 T 13-10-2018 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.3E-52 T 13-10-2018 Y11_27941 83bc688d66125db440e3f4fd575952ac 466 SUPERFAMILY SSF51905 1 322 2.5E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_27941 83bc688d66125db440e3f4fd575952ac 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 6.8E-30 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Y11_31361 f291dd26b9354b88b92537db91e4b502 254 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 30 247 1.3E-91 T 13-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 Y11_31361 f291dd26b9354b88b92537db91e4b502 254 SUPERFAMILY SSF54197 30 247 1.02E-86 T 13-10-2018 IPR036265 HIT-like superfamily Y11_31361 f291dd26b9354b88b92537db91e4b502 254 Gene3D G3DSA:3.30.428.30 24 249 3.9E-91 T 13-10-2018 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily KEGG: 00564+3.6.1.26 Y11_31361 f291dd26b9354b88b92537db91e4b502 254 PIRSF PIRSF001273 1 251 2.3E-101 T 13-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 Y11_31361 f291dd26b9354b88b92537db91e4b502 254 Hamap MF_00319 CDP-diacylglycerol pyrophosphatase [cdh]. 2 249 40.964 T 13-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 Y11_40321 2c48f07586208788798d648ebdaf2751 531 Gene3D G3DSA:3.30.1370.120 16 181 1.4E-50 T 13-10-2018 IPR038591 NolW-like superfamily Y11_40321 2c48f07586208788798d648ebdaf2751 531 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 25 530 7.5E-125 T 13-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 Y11_40321 2c48f07586208788798d648ebdaf2751 531 Gene3D G3DSA:3.30.1370.120 260 337 7.2E-16 T 13-10-2018 IPR038591 NolW-like superfamily Y11_40321 2c48f07586208788798d648ebdaf2751 531 Gene3D G3DSA:3.30.1370.120 184 255 1.1E-16 T 13-10-2018 IPR038591 NolW-like superfamily Y11_40321 2c48f07586208788798d648ebdaf2751 531 Pfam PF00263 Bacterial type II and III secretion system protein 410 530 1.1E-29 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Y11_40321 2c48f07586208788798d648ebdaf2751 531 PRINTS PR00811 Bacterial general secretion pathway protein D signature 406 430 3.8E-16 T 13-10-2018 IPR001775 GspD/PilQ family Y11_40321 2c48f07586208788798d648ebdaf2751 531 PRINTS PR00811 Bacterial general secretion pathway protein D signature 441 451 3.8E-16 T 13-10-2018 IPR001775 GspD/PilQ family Y11_40321 2c48f07586208788798d648ebdaf2751 531 PRINTS PR00811 Bacterial general secretion pathway protein D signature 339 349 3.8E-16 T 13-10-2018 IPR001775 GspD/PilQ family Y11_40321 2c48f07586208788798d648ebdaf2751 531 Pfam PF03958 Bacterial type II/III secretion system short domain 262 339 5.5E-16 T 13-10-2018 IPR005644 NolW-like Y11_40321 2c48f07586208788798d648ebdaf2751 531 Pfam PF03958 Bacterial type II/III secretion system short domain 122 182 3.5E-10 T 13-10-2018 IPR005644 NolW-like Y11_40321 2c48f07586208788798d648ebdaf2751 531 Pfam PF03958 Bacterial type II/III secretion system short domain 186 256 3.8E-10 T 13-10-2018 IPR005644 NolW-like Y11_21911 08829330636b91cf695451020e01e059 243 Pfam PF13525 Outer membrane lipoprotein 28 236 9.3E-85 T 13-10-2018 IPR039565 Outer membrane lipoprotein BamD-like Y11_21911 08829330636b91cf695451020e01e059 243 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 242 38.772 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD Y11_21911 08829330636b91cf695451020e01e059 243 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 241 3.3E-89 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD Y11_21911 08829330636b91cf695451020e01e059 243 SUPERFAMILY SSF48452 27 119 1.42E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_21911 08829330636b91cf695451020e01e059 243 Gene3D G3DSA:1.25.40.10 29 243 1.5E-62 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_12741 b566f3910b2598f15fc58f78f0e9cccc 139 Gene3D G3DSA:1.10.260.40 12 76 4.6E-10 T 13-10-2018 Y11_12741 b566f3910b2598f15fc58f78f0e9cccc 139 SMART SM00530 15 69 8.5E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_12741 b566f3910b2598f15fc58f78f0e9cccc 139 Pfam PF01381 Helix-turn-helix 24 69 5.9E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_12741 b566f3910b2598f15fc58f78f0e9cccc 139 SUPERFAMILY SSF47413 11 71 4.44E-8 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_04811 ebbd1601f15d0b6d5a2d56457fe17bac 188 Gene3D G3DSA:1.10.1130.10 23 144 9.5E-7 T 13-10-2018 Y11_04811 ebbd1601f15d0b6d5a2d56457fe17bac 188 SUPERFAMILY SSF48695 13 177 6.46E-25 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Y11_04811 ebbd1601f15d0b6d5a2d56457fe17bac 188 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 38 179 1.4E-56 T 13-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 Y11_04811 ebbd1601f15d0b6d5a2d56457fe17bac 188 Pfam PF13435 Cytochrome c554 and c-prime 44 85 0.023 T 13-10-2018 IPR023155 Cytochrome c-552/4 Y11_05681 b7790dba0d9a0739a426f4cf6386480d 417 SMART SM01329 29 413 8.6E-181 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Y11_05681 b7790dba0d9a0739a426f4cf6386480d 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 413 1.8E-117 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Y11_05681 b7790dba0d9a0739a426f4cf6386480d 417 SUPERFAMILY SSF53659 4 417 1.5E-148 T 13-10-2018 Y11_05681 b7790dba0d9a0739a426f4cf6386480d 417 Gene3D G3DSA:3.40.718.10 1 417 2.3E-186 T 13-10-2018 Y11_05681 b7790dba0d9a0739a426f4cf6386480d 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 417 8.0E-234 T 13-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Y11_05681 b7790dba0d9a0739a426f4cf6386480d 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Y11_40861 0f5ca79a93d2136454d4e3b06a76a625 305 SUPERFAMILY SSF53850 93 296 2.33E-40 T 13-10-2018 Y11_40861 0f5ca79a93d2136454d4e3b06a76a625 305 Gene3D G3DSA:1.10.10.10 7 94 2.4E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_40861 0f5ca79a93d2136454d4e3b06a76a625 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.2E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_40861 0f5ca79a93d2136454d4e3b06a76a625 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.2E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_40861 0f5ca79a93d2136454d4e3b06a76a625 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.2E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_40861 0f5ca79a93d2136454d4e3b06a76a625 305 Pfam PF03466 LysR substrate binding domain 91 292 5.0E-39 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_40861 0f5ca79a93d2136454d4e3b06a76a625 305 Gene3D G3DSA:3.40.190.10 163 262 2.8E-60 T 13-10-2018 Y11_40861 0f5ca79a93d2136454d4e3b06a76a625 305 Gene3D G3DSA:3.40.190.10 103 288 2.8E-60 T 13-10-2018 Y11_40861 0f5ca79a93d2136454d4e3b06a76a625 305 SUPERFAMILY SSF46785 3 87 5.94E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_40861 0f5ca79a93d2136454d4e3b06a76a625 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.3E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_39551 b4f3859638f12eb486827f025175818d 478 SUPERFAMILY SSF81891 204 442 1.02E-50 T 13-10-2018 Y11_39551 b4f3859638f12eb486827f025175818d 478 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 41 470 1.9E-159 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 Y11_39551 b4f3859638f12eb486827f025175818d 478 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 233 293 7.2E-20 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Y11_39551 b4f3859638f12eb486827f025175818d 478 Pfam PF01743 Poly A polymerase head domain 72 206 1.1E-39 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Y11_39551 b4f3859638f12eb486827f025175818d 478 Gene3D G3DSA:3.30.460.10 38 203 3.6E-66 T 13-10-2018 Y11_39551 b4f3859638f12eb486827f025175818d 478 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 11 469 38.414 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 Y11_39551 b4f3859638f12eb486827f025175818d 478 Pfam PF12626 Polymerase A arginine-rich C-terminus 351 470 1.7E-43 T 13-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain Y11_39551 b4f3859638f12eb486827f025175818d 478 SUPERFAMILY SSF81301 43 202 1.55E-40 T 13-10-2018 Y11_39551 b4f3859638f12eb486827f025175818d 478 Gene3D G3DSA:1.10.3090.10 204 455 7.1E-102 T 13-10-2018 Y11_20561 a693e43f019aec1dec7243361566a1d6 434 PIRSF PIRSF003095 1 434 9.0E-130 T 13-10-2018 IPR005215 Trigger factor GO:0015031 Y11_20561 a693e43f019aec1dec7243361566a1d6 434 TIGRFAM TIGR00115 tig: trigger factor 13 412 9.4E-144 T 13-10-2018 IPR005215 Trigger factor GO:0015031 Y11_20561 a693e43f019aec1dec7243361566a1d6 434 Gene3D G3DSA:3.30.70.1050 1 115 1.9E-43 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Y11_20561 a693e43f019aec1dec7243361566a1d6 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 236 1.6E-14 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Y11_20561 a693e43f019aec1dec7243361566a1d6 434 Gene3D G3DSA:1.10.3120.10 116 417 1.5E-111 T 13-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Y11_20561 a693e43f019aec1dec7243361566a1d6 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 2.7E-44 T 13-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Y11_20561 a693e43f019aec1dec7243361566a1d6 434 SUPERFAMILY SSF109998 248 429 1.31E-48 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Y11_20561 a693e43f019aec1dec7243361566a1d6 434 SUPERFAMILY SSF54534 96 240 1.51E-37 T 13-10-2018 Y11_20561 a693e43f019aec1dec7243361566a1d6 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.951 T 13-10-2018 IPR005215 Trigger factor GO:0015031 Y11_20561 a693e43f019aec1dec7243361566a1d6 434 Gene3D G3DSA:3.10.50.40 150 246 1.5E-111 T 13-10-2018 Y11_20561 a693e43f019aec1dec7243361566a1d6 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 1.2E-40 T 13-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Y11_20561 a693e43f019aec1dec7243361566a1d6 434 SUPERFAMILY SSF102735 1 131 1.03E-41 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Y11_15481 68668b79491238576086fca8948fa58e 325 Gene3D G3DSA:1.10.10.10 22 123 4.1E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_15481 68668b79491238576086fca8948fa58e 325 SUPERFAMILY SSF46785 24 91 5.34E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_15481 68668b79491238576086fca8948fa58e 325 SMART SM00345 22 81 7.0E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_15481 68668b79491238576086fca8948fa58e 325 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 81 1.6E-11 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_15481 68668b79491238576086fca8948fa58e 325 Pfam PF00155 Aminotransferase class I and II 173 229 1.3E-4 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_15481 68668b79491238576086fca8948fa58e 325 SUPERFAMILY SSF53383 117 234 1.18E-19 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_15481 68668b79491238576086fca8948fa58e 325 Gene3D G3DSA:3.40.640.10 124 241 6.2E-23 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_01081 19239d387f5c651edb24774b5dfa215c 358 SUPERFAMILY SSF53955 51 351 7.97E-92 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Y11_01081 19239d387f5c651edb24774b5dfa215c 358 Gene3D G3DSA:1.10.530.10 98 352 8.4E-116 T 13-10-2018 Y11_01081 19239d387f5c651edb24774b5dfa215c 358 Gene3D G3DSA:1.10.8.350 60 232 8.4E-116 T 13-10-2018 Y11_01081 19239d387f5c651edb24774b5dfa215c 358 Pfam PF13406 Transglycosylase SLT domain 57 349 4.8E-91 T 13-10-2018 IPR031304 Transglycosylase SLT domain 2 Y11_01081 19239d387f5c651edb24774b5dfa215c 358 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 352 1.7E-120 T 13-10-2018 IPR011757 Lytic transglycosylase MltB Y11_23961 085218a1a692d412ec9baeb1d1d6fccb 367 Gene3D G3DSA:1.10.10.2140 318 367 1.8E-21 T 13-10-2018 Y11_23961 085218a1a692d412ec9baeb1d1d6fccb 367 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 367 2.7E-153 T 13-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Y11_23961 085218a1a692d412ec9baeb1d1d6fccb 367 Gene3D G3DSA:3.40.50.11750 27 263 4.8E-110 T 13-10-2018 Y11_23961 085218a1a692d412ec9baeb1d1d6fccb 367 Pfam PF01924 Hydrogenase formation hypA family 18 367 7.7E-149 T 13-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Y11_23961 085218a1a692d412ec9baeb1d1d6fccb 367 Gene3D G3DSA:3.40.50.11740 66 304 4.8E-110 T 13-10-2018 Y11_23961 085218a1a692d412ec9baeb1d1d6fccb 367 PIRSF PIRSF005622 1 367 7.6E-153 T 13-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Y11_13391 8c63102731164bc7461b1d8b7b7d540a 116 Pfam PF04965 Gene 25-like lysozyme 20 101 3.2E-15 T 13-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD Y11_13391 8c63102731164bc7461b1d8b7b7d540a 116 Gene3D G3DSA:3.10.450.40 6 116 2.1E-21 T 13-10-2018 Y11_13391 8c63102731164bc7461b1d8b7b7d540a 116 SUPERFAMILY SSF160719 14 115 1.31E-29 T 13-10-2018 Y11_25261 8c63102731164bc7461b1d8b7b7d540a 116 Pfam PF04965 Gene 25-like lysozyme 20 101 3.2E-15 T 13-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD Y11_25261 8c63102731164bc7461b1d8b7b7d540a 116 Gene3D G3DSA:3.10.450.40 6 116 2.1E-21 T 13-10-2018 Y11_25261 8c63102731164bc7461b1d8b7b7d540a 116 SUPERFAMILY SSF160719 14 115 1.31E-29 T 13-10-2018 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 Pfam PF01627 Hpt domain 7 102 5.1E-19 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 531 5.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 5.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 453 5.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 488 5.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 SMART SM01231 286 349 2.7E-20 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 Gene3D G3DSA:3.30.565.10 350 533 1.9E-52 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 SUPERFAMILY SSF55874 352 532 2.1E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 Pfam PF01584 CheW-like domain 539 665 2.3E-24 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 Pfam PF09078 CheY binding 165 227 2.9E-25 T 13-10-2018 IPR015162 CheY binding Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 SUPERFAMILY SSF47384 287 350 4.32E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 Gene3D G3DSA:2.30.30.40 534 662 7.0E-38 T 13-10-2018 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 287 349 1.0E-16 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 SMART SM00073 3 100 4.2E-29 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 SUPERFAMILY SSF50341 533 665 1.44E-30 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 Gene3D G3DSA:1.20.120.160 1 143 4.7E-43 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 SMART SM00260 526 666 7.3E-42 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 Gene3D G3DSA:3.30.70.400 159 232 4.0E-27 T 13-10-2018 IPR035891 CheY-binding domain of CheA Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 SUPERFAMILY SSF55052 164 227 4.18E-20 T 13-10-2018 IPR035891 CheY-binding domain of CheA Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 SUPERFAMILY SSF47226 5 124 5.18E-29 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 SMART SM00387 394 534 1.1E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 Gene3D G3DSA:1.10.287.560 286 349 1.3E-16 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 397 533 7.7E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_14641 02a9f47ee533af1999b4b8c12c30b0a8 682 Gene3D G3DSA:2.40.50.180 557 621 7.0E-38 T 13-10-2018 Y11_24081 3df7322e0555e8510202e1be4c68a85e 288 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 13-10-2018 IPR000540 Flagellar motor protein MotA, conserved site Y11_24081 3df7322e0555e8510202e1be4c68a85e 288 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 1.4E-113 T 13-10-2018 IPR022522 Flagellar motor stator, MotA Y11_24081 3df7322e0555e8510202e1be4c68a85e 288 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 234 3.9E-10 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Y11_28531 4a988dc3a2fdad4da2905a70bed95361 91 Pfam PF13560 Helix-turn-helix domain 12 66 1.2E-10 T 13-10-2018 Y11_28531 4a988dc3a2fdad4da2905a70bed95361 91 SMART SM00530 14 70 6.1E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_28531 4a988dc3a2fdad4da2905a70bed95361 91 SUPERFAMILY SSF47413 5 72 5.63E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_28531 4a988dc3a2fdad4da2905a70bed95361 91 Gene3D G3DSA:1.10.260.40 3 77 8.7E-13 T 13-10-2018 Y11_32561 d16a83e1a56d90dec289f64ee0fa6ceb 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 13-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site Y11_32561 d16a83e1a56d90dec289f64ee0fa6ceb 210 SUPERFAMILY SSF51206 8 136 1.23E-35 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Y11_32561 d16a83e1a56d90dec289f64ee0fa6ceb 210 SUPERFAMILY SSF46785 139 207 3.73E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_32561 d16a83e1a56d90dec289f64ee0fa6ceb 210 SMART SM00419 160 208 4.5E-17 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Y11_32561 d16a83e1a56d90dec289f64ee0fa6ceb 210 Gene3D G3DSA:1.10.10.10 139 207 1.3E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_32561 d16a83e1a56d90dec289f64ee0fa6ceb 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Y11_32561 d16a83e1a56d90dec289f64ee0fa6ceb 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Y11_32561 d16a83e1a56d90dec289f64ee0fa6ceb 210 SMART SM00100 2 122 1.1E-26 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Y11_32561 d16a83e1a56d90dec289f64ee0fa6ceb 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.5E-24 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Y11_32561 d16a83e1a56d90dec289f64ee0fa6ceb 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 13-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 Y11_32561 d16a83e1a56d90dec289f64ee0fa6ceb 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 13-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site Y11_32561 d16a83e1a56d90dec289f64ee0fa6ceb 210 Gene3D G3DSA:2.60.120.10 10 138 6.9E-45 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_32561 d16a83e1a56d90dec289f64ee0fa6ceb 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.8E-15 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Y11_32851 b22ea8bcef50ba378fd61637aeca6f44 64 Gene3D G3DSA:1.10.10.1100 1 57 2.7E-19 T 13-10-2018 Y11_32851 b22ea8bcef50ba378fd61637aeca6f44 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 5.4E-15 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Y11_11621 59351439a6a8f18a9f8c23288c398665 373 SUPERFAMILY SSF47819 194 300 2.18E-29 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Y11_11621 59351439a6a8f18a9f8c23288c398665 373 SMART SM00474 3 171 7.1E-40 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Y11_11621 59351439a6a8f18a9f8c23288c398665 373 Pfam PF00570 HRDC domain 213 279 8.0E-16 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Y11_11621 59351439a6a8f18a9f8c23288c398665 373 Gene3D G3DSA:3.30.420.10 1 194 1.2E-63 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_11621 59351439a6a8f18a9f8c23288c398665 373 TIGRFAM TIGR01388 rnd: ribonuclease D 5 371 1.6E-145 T 13-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 Y11_11621 59351439a6a8f18a9f8c23288c398665 373 Gene3D G3DSA:1.10.150.80 195 293 8.3E-23 T 13-10-2018 Y11_11621 59351439a6a8f18a9f8c23288c398665 373 SUPERFAMILY SSF47819 295 372 6.02E-23 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Y11_11621 59351439a6a8f18a9f8c23288c398665 373 Pfam PF01612 3'-5' exonuclease 3 168 1.2E-34 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Y11_11621 59351439a6a8f18a9f8c23288c398665 373 Gene3D G3DSA:1.10.150.80 294 373 3.6E-29 T 13-10-2018 Y11_11621 59351439a6a8f18a9f8c23288c398665 373 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 45.649 T 13-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 Y11_11621 59351439a6a8f18a9f8c23288c398665 373 SMART SM00341 210 289 5.5E-16 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Y11_11621 59351439a6a8f18a9f8c23288c398665 373 SUPERFAMILY SSF53098 2 210 5.85E-63 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_38311 db2c9be6020a2fffb06f437102be6503 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 13-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Y11_38311 db2c9be6020a2fffb06f437102be6503 819 Gene3D G3DSA:3.40.50.720 466 811 2.2E-119 T 13-10-2018 Y11_38311 db2c9be6020a2fffb06f437102be6503 819 Gene3D G3DSA:3.30.2130.10 304 464 5.8E-48 T 13-10-2018 Y11_38311 db2c9be6020a2fffb06f437102be6503 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Y11_38311 db2c9be6020a2fffb06f437102be6503 819 Gene3D G3DSA:3.40.1160.10 3 295 5.8E-85 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Y11_38311 db2c9be6020a2fffb06f437102be6503 819 SUPERFAMILY SSF51735 464 636 3.1E-39 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_38311 db2c9be6020a2fffb06f437102be6503 819 Gene3D G3DSA:3.30.360.10 625 795 2.2E-119 T 13-10-2018 Y11_38311 db2c9be6020a2fffb06f437102be6503 819 Pfam PF00742 Homoserine dehydrogenase 614 810 8.8E-49 T 13-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Y11_38311 db2c9be6020a2fffb06f437102be6503 819 Pfam PF01842 ACT domain 324 376 1.5E-8 T 13-10-2018 IPR002912 ACT domain Y11_38311 db2c9be6020a2fffb06f437102be6503 819 SUPERFAMILY SSF55021 384 476 7.02E-22 T 13-10-2018 Y11_38311 db2c9be6020a2fffb06f437102be6503 819 Pfam PF00696 Amino acid kinase family 2 284 2.3E-46 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Y11_38311 db2c9be6020a2fffb06f437102be6503 819 SUPERFAMILY SSF55021 304 381 3.51E-23 T 13-10-2018 Y11_38311 db2c9be6020a2fffb06f437102be6503 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 5.1E-28 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Y11_38311 db2c9be6020a2fffb06f437102be6503 819 Pfam PF13840 ACT domain 395 453 9.1E-8 T 13-10-2018 IPR027795 CASTOR, ACT domain Y11_38311 db2c9be6020a2fffb06f437102be6503 819 SUPERFAMILY SSF53633 1 297 7.02E-73 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Y11_38311 db2c9be6020a2fffb06f437102be6503 819 PIRSF PIRSF000727 1 817 0.0 T 13-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Y11_38311 db2c9be6020a2fffb06f437102be6503 819 Gene3D G3DSA:1.20.120.1320 41 142 5.8E-85 T 13-10-2018 Y11_38311 db2c9be6020a2fffb06f437102be6503 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 2.3E-144 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Y11_38311 db2c9be6020a2fffb06f437102be6503 819 SUPERFAMILY SSF55347 614 797 8.5E-52 T 13-10-2018 Y11_34901 17a13e1e5a175a39d934fdf96b71346b 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 13-10-2018 Y11_34901 17a13e1e5a175a39d934fdf96b71346b 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.743 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Y11_34901 17a13e1e5a175a39d934fdf96b71346b 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.7E-24 T 13-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Y11_34901 17a13e1e5a175a39d934fdf96b71346b 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 13-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_34901 17a13e1e5a175a39d934fdf96b71346b 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.8E-30 T 13-10-2018 IPR020784 Ribosomal protein L11, N-terminal Y11_34901 17a13e1e5a175a39d934fdf96b71346b 142 SUPERFAMILY SSF54747 3 73 2.49E-30 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Y11_34901 17a13e1e5a175a39d934fdf96b71346b 142 SUPERFAMILY SSF46906 68 141 5.76E-26 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Y11_34901 17a13e1e5a175a39d934fdf96b71346b 142 Gene3D G3DSA:1.10.10.250 73 141 7.3E-27 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Y11_34901 17a13e1e5a175a39d934fdf96b71346b 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 7.6E-65 T 13-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_34901 17a13e1e5a175a39d934fdf96b71346b 142 Gene3D G3DSA:3.30.1550.10 2 72 2.1E-35 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Y11_34901 17a13e1e5a175a39d934fdf96b71346b 142 SMART SM00649 9 141 2.0E-83 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Y11_20331 e170c44f73704e57c10cc6de67d4d054 67 Pfam PF05321 Haemolysin expression modulating protein 8 64 4.1E-33 T 13-10-2018 IPR007985 Haemolysin expression modulating, HHA Y11_20331 e170c44f73704e57c10cc6de67d4d054 67 SUPERFAMILY SSF68989 1 67 1.22E-30 T 13-10-2018 IPR036666 HHA superfamily Y11_20331 e170c44f73704e57c10cc6de67d4d054 67 Gene3D G3DSA:1.20.1280.40 1 67 3.7E-37 T 13-10-2018 IPR036666 HHA superfamily Y11_03511 d283964b3264bfeeb597e1fd0b6b53ce 455 Gene3D G3DSA:3.40.50.1100 40 153 1.5E-108 T 13-10-2018 Y11_03511 d283964b3264bfeeb597e1fd0b6b53ce 455 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 301 2.7E-64 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Y11_03511 d283964b3264bfeeb597e1fd0b6b53ce 455 SMART SM00116 406 451 48.0 T 13-10-2018 IPR000644 CBS domain Y11_03511 d283964b3264bfeeb597e1fd0b6b53ce 455 SMART SM00116 342 389 5.1E-6 T 13-10-2018 IPR000644 CBS domain Y11_03511 d283964b3264bfeeb597e1fd0b6b53ce 455 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Y11_03511 d283964b3264bfeeb597e1fd0b6b53ce 455 Pfam PF00571 CBS domain 344 388 5.6E-7 T 13-10-2018 IPR000644 CBS domain Y11_03511 d283964b3264bfeeb597e1fd0b6b53ce 455 Pfam PF00571 CBS domain 399 448 2.8E-4 T 13-10-2018 IPR000644 CBS domain Y11_03511 d283964b3264bfeeb597e1fd0b6b53ce 455 Gene3D G3DSA:3.10.580.10 335 454 3.8E-20 T 13-10-2018 Y11_03511 d283964b3264bfeeb597e1fd0b6b53ce 455 SUPERFAMILY SSF54631 343 452 8.46E-21 T 13-10-2018 Y11_03511 d283964b3264bfeeb597e1fd0b6b53ce 455 SUPERFAMILY SSF53686 4 320 1.83E-93 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y11_03511 d283964b3264bfeeb597e1fd0b6b53ce 455 Gene3D G3DSA:3.40.50.1100 9 309 1.5E-108 T 13-10-2018 Y11_37201 c9f3f03f697cb6683a65da794fa22fad 238 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_37201 c9f3f03f697cb6683a65da794fa22fad 238 SUPERFAMILY SSF52540 3 229 3.38E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_37201 c9f3f03f697cb6683a65da794fa22fad 238 SMART SM00382 32 220 5.9E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_37201 c9f3f03f697cb6683a65da794fa22fad 238 Pfam PF00005 ABC transporter 24 171 5.6E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_37201 c9f3f03f697cb6683a65da794fa22fad 238 Gene3D G3DSA:3.40.50.300 1 236 1.5E-74 T 13-10-2018 Y11_20691 2ebe1c42deeda15fdded682fab23a9af 196 SUPERFAMILY SSF52317 5 189 3.82E-47 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_20691 2ebe1c42deeda15fdded682fab23a9af 196 Pfam PF01965 DJ-1/PfpI family 4 169 8.7E-45 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Y11_20691 2ebe1c42deeda15fdded682fab23a9af 196 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 182 4.2E-65 T 13-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 Y11_20691 2ebe1c42deeda15fdded682fab23a9af 196 Gene3D G3DSA:3.40.50.880 1 196 3.1E-55 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 Gene3D G3DSA:3.30.2090.10 188 278 1.0E-296 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 Gene3D G3DSA:3.30.70.1430 567 662 1.0E-296 T 13-10-2018 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 SUPERFAMILY SSF82866 299 498 1.57E-46 T 13-10-2018 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 Gene3D G3DSA:3.30.70.1440 663 861 1.0E-296 T 13-10-2018 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 2.5E-81 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.5E-81 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 2.5E-81 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 2.5E-81 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 2.5E-81 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.5E-81 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.5E-81 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 2.5E-81 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 2.5E-81 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 Gene3D G3DSA:1.20.1640.10 19 512 1.0E-296 T 13-10-2018 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1037 35.077 T 13-10-2018 IPR022831 Multidrug resistance protein MdtB Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 Gene3D G3DSA:1.20.1640.10 513 1019 1.0E-296 T 13-10-2018 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 SUPERFAMILY SSF82693 565 662 1.46E-15 T 13-10-2018 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 SUPERFAMILY SSF82693 49 142 8.63E-23 T 13-10-2018 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 SUPERFAMILY SSF82866 799 1025 3.79E-47 T 13-10-2018 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 SUPERFAMILY SSF82714 192 275 6.15E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 SUPERFAMILY SSF82714 719 802 1.06E-15 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 SUPERFAMILY SSF82693 146 333 3.53E-21 T 13-10-2018 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 Gene3D G3DSA:3.30.2090.10 715 803 1.0E-296 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 Gene3D G3DSA:3.30.70.1320 144 335 1.0E-296 T 13-10-2018 Y11_43321 e9ba9326ec37ed59053659f9dfe7ce07 1047 Gene3D G3DSA:3.30.70.1430 49 811 1.0E-296 T 13-10-2018 Y11_27701 a6dc6e56342f021c91f6cdae2bdc334d 432 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 31 427 0.0 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Y11_27701 a6dc6e56342f021c91f6cdae2bdc334d 432 SUPERFAMILY SSF56935 25 432 1.28E-146 T 13-10-2018 Y11_27701 a6dc6e56342f021c91f6cdae2bdc334d 432 Hamap MF_01301 Maltoporin [lamB]. 3 432 43.084 T 13-10-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 Y11_27701 a6dc6e56342f021c91f6cdae2bdc334d 432 Pfam PF02264 LamB porin 27 432 6.4E-144 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Y11_27701 a6dc6e56342f021c91f6cdae2bdc334d 432 Gene3D G3DSA:2.40.170.10 25 432 2.9E-170 T 13-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 Y11_02371 2f67fcf5907a786e925aabc3e08b4ccf 147 SUPERFAMILY SSF51735 5 115 9.44E-29 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_02371 2f67fcf5907a786e925aabc3e08b4ccf 147 Gene3D G3DSA:3.40.50.720 1 117 1.7E-35 T 13-10-2018 Y11_02371 2f67fcf5907a786e925aabc3e08b4ccf 147 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 4 114 4.3E-29 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Y11_21981 1eccac613b4e0d32735a6a3aa7272bcb 385 SUPERFAMILY SSF53850 104 290 1.85E-57 T 13-10-2018 Y11_21981 1eccac613b4e0d32735a6a3aa7272bcb 385 Gene3D G3DSA:1.20.59.10 1 106 2.1E-33 T 13-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Y11_21981 1eccac613b4e0d32735a6a3aa7272bcb 385 Gene3D G3DSA:3.40.190.10 188 273 5.6E-57 T 13-10-2018 Y11_21981 1eccac613b4e0d32735a6a3aa7272bcb 385 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 6 88 2.7E-34 T 13-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 Y11_21981 1eccac613b4e0d32735a6a3aa7272bcb 385 SMART SM00830 10 90 1.4E-22 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Y11_21981 1eccac613b4e0d32735a6a3aa7272bcb 385 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 324 331 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Y11_21981 1eccac613b4e0d32735a6a3aa7272bcb 385 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 260 282 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Y11_21981 1eccac613b4e0d32735a6a3aa7272bcb 385 PIRSF PIRSF001500 1 379 7.1E-144 T 13-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Y11_21981 1eccac613b4e0d32735a6a3aa7272bcb 385 Gene3D G3DSA:3.40.190.10 107 280 5.6E-57 T 13-10-2018 Y11_21981 1eccac613b4e0d32735a6a3aa7272bcb 385 Gene3D G3DSA:3.30.70.260 290 378 2.2E-23 T 13-10-2018 Y11_21981 1eccac613b4e0d32735a6a3aa7272bcb 385 Pfam PF01817 Chorismate mutase type II 10 88 3.7E-16 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Y11_21981 1eccac613b4e0d32735a6a3aa7272bcb 385 SUPERFAMILY SSF55021 279 376 4.76E-23 T 13-10-2018 Y11_21981 1eccac613b4e0d32735a6a3aa7272bcb 385 Pfam PF00800 Prephenate dehydratase 105 285 6.6E-63 T 13-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Y11_21981 1eccac613b4e0d32735a6a3aa7272bcb 385 SUPERFAMILY SSF48600 5 91 4.03E-21 T 13-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Y11_29591 6b236b0c9900f99eb5bac2459a93e7a8 502 Gene3D G3DSA:1.10.8.300 222 285 6.9E-28 T 13-10-2018 Y11_29591 6b236b0c9900f99eb5bac2459a93e7a8 502 SMART SM00382 38 187 3.1E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_29591 6b236b0c9900f99eb5bac2459a93e7a8 502 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 1.4E-24 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Y11_29591 6b236b0c9900f99eb5bac2459a93e7a8 502 Gene3D G3DSA:1.20.58.1510 287 494 1.7E-97 T 13-10-2018 Y11_29591 6b236b0c9900f99eb5bac2459a93e7a8 502 Hamap MF_01625 ATPase RavA [ravA]. 1 498 58.337 T 13-10-2018 IPR023671 ATPase RavA GO:0005737|GO:0016887 Y11_29591 6b236b0c9900f99eb5bac2459a93e7a8 502 Pfam PF12592 Protein of unknown function (DUF3763) 444 497 8.7E-21 T 13-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 Y11_29591 6b236b0c9900f99eb5bac2459a93e7a8 502 SUPERFAMILY SSF52540 21 289 2.34E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_29591 6b236b0c9900f99eb5bac2459a93e7a8 502 Gene3D G3DSA:2.40.128.430 331 441 1.7E-97 T 13-10-2018 Y11_29591 6b236b0c9900f99eb5bac2459a93e7a8 502 Gene3D G3DSA:3.40.50.300 1 221 1.3E-61 T 13-10-2018 Y11_17111 5bf23078a098b8f9215212aafdbcc022 157 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 10 145 1.8E-36 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Y11_17111 5bf23078a098b8f9215212aafdbcc022 157 PRINTS PR00446 Hydrogen uptake protein signature 9 21 1.5E-12 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Y11_17111 5bf23078a098b8f9215212aafdbcc022 157 PRINTS PR00446 Hydrogen uptake protein signature 21 32 1.5E-12 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Y11_17111 5bf23078a098b8f9215212aafdbcc022 157 PRINTS PR00446 Hydrogen uptake protein signature 62 72 1.5E-12 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Y11_17111 5bf23078a098b8f9215212aafdbcc022 157 PRINTS PR00446 Hydrogen uptake protein signature 73 89 1.5E-12 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Y11_17111 5bf23078a098b8f9215212aafdbcc022 157 PRINTS PR00446 Hydrogen uptake protein signature 39 56 1.5E-12 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Y11_17111 5bf23078a098b8f9215212aafdbcc022 157 SUPERFAMILY SSF53163 10 155 1.75E-35 T 13-10-2018 IPR023430 Peptidase HybD-like domain superfamily Y11_17111 5bf23078a098b8f9215212aafdbcc022 157 Pfam PF01750 Hydrogenase maturation protease 28 144 1.6E-26 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Y11_17111 5bf23078a098b8f9215212aafdbcc022 157 Gene3D G3DSA:3.40.50.1450 5 157 1.2E-57 T 13-10-2018 IPR023430 Peptidase HybD-like domain superfamily Y11_17111 5bf23078a098b8f9215212aafdbcc022 157 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 10 152 8.9E-54 T 13-10-2018 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 Y11_24811 bed9f073d99af869809bba5d0f931a37 758 SUPERFAMILY SSF101904 498 741 8.76E-51 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Y11_24811 bed9f073d99af869809bba5d0f931a37 758 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 469 4.9E-134 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Y11_24811 bed9f073d99af869809bba5d0f931a37 758 Gene3D G3DSA:3.90.199.10 31 162 3.8E-59 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Y11_24811 bed9f073d99af869809bba5d0f931a37 758 Gene3D G3DSA:2.120.10.90 501 730 4.3E-11 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Y11_24811 bed9f073d99af869809bba5d0f931a37 758 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 743 34.089 T 13-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24811 bed9f073d99af869809bba5d0f931a37 758 SUPERFAMILY SSF56719 32 483 1.7E-153 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Y11_24811 bed9f073d99af869809bba5d0f931a37 758 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 696 4.1E-8 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Y11_24811 bed9f073d99af869809bba5d0f931a37 758 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 633 0.016 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Y11_24811 bed9f073d99af869809bba5d0f931a37 758 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 742 0.0 T 13-10-2018 Y11_24811 bed9f073d99af869809bba5d0f931a37 758 SMART SM00434 12 462 3.6E-237 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Y11_24811 bed9f073d99af869809bba5d0f931a37 758 Gene3D G3DSA:1.10.268.10 345 484 2.1E-45 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Y11_24811 bed9f073d99af869809bba5d0f931a37 758 Gene3D G3DSA:3.30.1360.40 163 344 2.7E-70 T 13-10-2018 Y11_42001 3a45826586679cdeb5104f4c67aa8d64 387 Gene3D G3DSA:2.120.10.30 33 383 5.3E-135 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Y11_42001 3a45826586679cdeb5104f4c67aa8d64 387 Pfam PF07995 Glucose / Sorbosone dehydrogenase 48 380 9.6E-134 T 13-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase Y11_42001 3a45826586679cdeb5104f4c67aa8d64 387 SUPERFAMILY SSF50952 34 384 3.4E-47 T 13-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 Gene3D G3DSA:2.60.260.20 114 246 6.8E-39 T 13-10-2018 Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 Gene3D G3DSA:2.60.260.20 251 330 2.8E-29 T 13-10-2018 Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 SUPERFAMILY SSF49493 112 259 4.45E-21 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 SUPERFAMILY SSF57938 131 208 1.23E-23 T 13-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 Gene3D G3DSA:2.10.230.10 144 204 6.8E-39 T 13-10-2018 Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 PRINTS PR00625 DnaJ domain signature 62 81 6.8E-32 T 13-10-2018 IPR001623 DnaJ domain Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 PRINTS PR00625 DnaJ domain signature 25 40 6.8E-32 T 13-10-2018 IPR001623 DnaJ domain Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 PRINTS PR00625 DnaJ domain signature 42 62 6.8E-32 T 13-10-2018 IPR001623 DnaJ domain Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 PRINTS PR00625 DnaJ domain signature 7 25 6.8E-32 T 13-10-2018 IPR001623 DnaJ domain Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 13-10-2018 IPR018253 DnaJ domain, conserved site Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 SMART SM00271 4 62 3.8E-28 T 13-10-2018 IPR001623 DnaJ domain Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 Gene3D G3DSA:1.10.287.110 1 113 8.7E-37 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 SUPERFAMILY SSF49493 256 341 5.23E-22 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 347 5.2E-141 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 Pfam PF00226 DnaJ domain 5 67 9.3E-27 T 13-10-2018 IPR001623 DnaJ domain Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 Pfam PF01556 DnaJ C terminal domain 118 330 3.9E-46 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 Pfam PF00684 DnaJ central domain 144 204 2.4E-15 T 13-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 370 42.348 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Y11_38421 73c7d3bcea511ccc41b7df369a24e60c 376 SUPERFAMILY SSF46565 1 106 3.14E-36 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Y11_25651 9cce7ef875b733382043f67d5d7519ff 322 Gene3D G3DSA:3.90.1150.160 216 322 2.3E-36 T 13-10-2018 Y11_25651 9cce7ef875b733382043f67d5d7519ff 322 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 1 304 8.7E-135 T 13-10-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 Y11_25651 9cce7ef875b733382043f67d5d7519ff 322 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 125 146 - T 13-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 Y11_25651 9cce7ef875b733382043f67d5d7519ff 322 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 8 239 1.0E-67 T 13-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Y11_25651 9cce7ef875b733382043f67d5d7519ff 322 Gene3D G3DSA:3.40.640.10 1 214 1.2E-57 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_25651 9cce7ef875b733382043f67d5d7519ff 322 SUPERFAMILY SSF53383 3 306 6.26E-87 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_08651 a27efa77678ff266b048be1892b02339 321 SUPERFAMILY SSF161098 69 300 2.22E-23 T 13-10-2018 IPR035906 MetI-like superfamily Y11_08651 a27efa77678ff266b048be1892b02339 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 4.7E-43 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_17631 cf3b2814306f50405267aa43ccfd089b 727 Gene3D G3DSA:3.40.50.300 505 690 2.5E-19 T 13-10-2018 Y11_17631 cf3b2814306f50405267aa43ccfd089b 727 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 34 696 34.364 T 13-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 Y11_17631 cf3b2814306f50405267aa43ccfd089b 727 Gene3D G3DSA:3.40.50.300 26 289 1.5E-39 T 13-10-2018 Y11_17631 cf3b2814306f50405267aa43ccfd089b 727 SMART SM00488 18 294 0.0037 T 13-10-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 Y11_17631 cf3b2814306f50405267aa43ccfd089b 727 SUPERFAMILY SSF52540 47 670 2.94E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_17631 cf3b2814306f50405267aa43ccfd089b 727 SMART SM00487 23 307 0.0015 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Y11_17631 cf3b2814306f50405267aa43ccfd089b 727 SMART SM00491 545 677 5.0E-31 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Y11_17631 cf3b2814306f50405267aa43ccfd089b 727 Pfam PF06733 DEAD_2 197 263 2.0E-7 T 13-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 Y11_17631 cf3b2814306f50405267aa43ccfd089b 727 Pfam PF13307 Helicase C-terminal domain 534 688 1.4E-23 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Y11_18381 8f811727d4214999a51f1114ea6f9c68 283 Gene3D G3DSA:3.40.570.10 42 283 1.7E-72 T 13-10-2018 Y11_18381 8f811727d4214999a51f1114ea6f9c68 283 SMART SM00892 62 264 3.9E-42 T 13-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 Y11_18381 8f811727d4214999a51f1114ea6f9c68 283 Pfam PF01223 DNA/RNA non-specific endonuclease 47 263 8.4E-43 T 13-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 Y11_18381 8f811727d4214999a51f1114ea6f9c68 283 SUPERFAMILY SSF54060 46 267 1.24E-47 T 13-10-2018 Y11_18381 8f811727d4214999a51f1114ea6f9c68 283 SMART SM00477 63 264 4.4E-41 T 13-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 Y11_03311 b2851bb9e364951db633227bf3a59ac3 154 PRINTS PR00969 Pili chaperone signature 117 134 1.1E-17 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_03311 b2851bb9e364951db633227bf3a59ac3 154 PRINTS PR00969 Pili chaperone signature 89 110 1.1E-17 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_03311 b2851bb9e364951db633227bf3a59ac3 154 PRINTS PR00969 Pili chaperone signature 44 53 1.1E-17 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_03311 b2851bb9e364951db633227bf3a59ac3 154 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 116 133 - T 13-10-2018 IPR018046 Pili assembly chaperone, conserved site Y11_03311 b2851bb9e364951db633227bf3a59ac3 154 Gene3D G3DSA:2.60.40.10 44 154 2.3E-33 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_03311 b2851bb9e364951db633227bf3a59ac3 154 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 44 141 4.7E-28 T 13-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Y11_03311 b2851bb9e364951db633227bf3a59ac3 154 SUPERFAMILY SSF49354 43 147 1.23E-27 T 13-10-2018 IPR008962 PapD-like superfamily Y11_41891 d660d1edd1b2410e51d4c6b0932932c0 329 Pfam PF03253 Urea transporter 24 319 8.1E-92 T 13-10-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 Y11_41891 d660d1edd1b2410e51d4c6b0932932c0 329 TIGRFAM TIGR03441 urea_trans_yut: urea transporter 21 318 5.5E-110 T 13-10-2018 IPR017807 Urea transporter, bacteria GO:0015204|GO:0016021|GO:0071918 Y11_41891 d660d1edd1b2410e51d4c6b0932932c0 329 PIRSF PIRSF016502 7 329 1.4E-103 T 13-10-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 Y11_41891 d660d1edd1b2410e51d4c6b0932932c0 329 Gene3D G3DSA:1.10.3430.10 8 328 3.9E-98 T 13-10-2018 IPR029020 Ammonium/urea transporter Y11_14901 cccb9d60daf2f74cd59fb0a950372e79 425 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Y11_14901 cccb9d60daf2f74cd59fb0a950372e79 425 Gene3D G3DSA:2.160.10.10 301 425 1.3E-38 T 13-10-2018 Y11_14901 cccb9d60daf2f74cd59fb0a950372e79 425 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 51.423 T 13-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Y11_14901 cccb9d60daf2f74cd59fb0a950372e79 425 SUPERFAMILY SSF53448 19 359 1.01E-76 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_14901 cccb9d60daf2f74cd59fb0a950372e79 425 Gene3D G3DSA:3.90.550.10 3 300 2.9E-91 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_14901 cccb9d60daf2f74cd59fb0a950372e79 425 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Y11_14901 cccb9d60daf2f74cd59fb0a950372e79 425 SUPERFAMILY SSF51161 310 411 2.91E-18 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Y11_14901 cccb9d60daf2f74cd59fb0a950372e79 425 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 1.2E-153 T 13-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Y11_14901 cccb9d60daf2f74cd59fb0a950372e79 425 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Y11_14901 cccb9d60daf2f74cd59fb0a950372e79 425 Pfam PF00483 Nucleotidyl transferase 22 290 9.0E-68 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Y11_07261 928b30445b9606b81db781fc8e45c176 507 SMART SM00267 387 503 9.0E-6 T 13-10-2018 IPR000160 GGDEF domain Y11_07261 928b30445b9606b81db781fc8e45c176 507 Gene3D G3DSA:3.30.70.270 434 505 2.5E-9 T 13-10-2018 Y11_07261 928b30445b9606b81db781fc8e45c176 507 SMART SM00086 338 380 0.0027 T 13-10-2018 IPR001610 PAC motif Y11_07261 928b30445b9606b81db781fc8e45c176 507 SMART SM00086 93 135 0.066 T 13-10-2018 IPR001610 PAC motif Y11_07261 928b30445b9606b81db781fc8e45c176 507 Gene3D G3DSA:3.30.70.270 384 433 2.5E-9 T 13-10-2018 Y11_07261 928b30445b9606b81db781fc8e45c176 507 Gene3D G3DSA:3.30.450.20 269 377 1.3E-23 T 13-10-2018 Y11_07261 928b30445b9606b81db781fc8e45c176 507 SMART SM00091 20 86 1.2E-7 T 13-10-2018 IPR000014 PAS domain Y11_07261 928b30445b9606b81db781fc8e45c176 507 SMART SM00091 144 210 8.9 T 13-10-2018 IPR000014 PAS domain Y11_07261 928b30445b9606b81db781fc8e45c176 507 SMART SM00091 266 332 1.4E-5 T 13-10-2018 IPR000014 PAS domain Y11_07261 928b30445b9606b81db781fc8e45c176 507 Pfam PF08447 PAS fold 289 374 1.4E-15 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Y11_07261 928b30445b9606b81db781fc8e45c176 507 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 262 387 1.1E-14 T 13-10-2018 IPR000014 PAS domain Y11_07261 928b30445b9606b81db781fc8e45c176 507 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 132 3.1E-12 T 13-10-2018 IPR000014 PAS domain Y11_07261 928b30445b9606b81db781fc8e45c176 507 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 261 1.8E-8 T 13-10-2018 IPR000014 PAS domain Y11_07261 928b30445b9606b81db781fc8e45c176 507 Gene3D G3DSA:3.30.450.20 16 135 1.0E-17 T 13-10-2018 Y11_07261 928b30445b9606b81db781fc8e45c176 507 Pfam PF08448 PAS fold 152 255 1.3E-9 T 13-10-2018 IPR013656 PAS fold-4 Y11_07261 928b30445b9606b81db781fc8e45c176 507 Pfam PF00990 Diguanylate cyclase, GGDEF domain 398 437 4.1E-6 T 13-10-2018 IPR000160 GGDEF domain Y11_07261 928b30445b9606b81db781fc8e45c176 507 SUPERFAMILY SSF55073 403 501 5.65E-11 T 13-10-2018 IPR029787 Nucleotide cyclase Y11_07261 928b30445b9606b81db781fc8e45c176 507 Pfam PF00989 PAS fold 22 125 1.7E-9 T 13-10-2018 IPR013767 PAS fold GO:0006355 Y11_07261 928b30445b9606b81db781fc8e45c176 507 Gene3D G3DSA:3.30.450.20 140 268 5.6E-17 T 13-10-2018 Y11_07261 928b30445b9606b81db781fc8e45c176 507 SUPERFAMILY SSF55785 251 377 3.07E-23 T 13-10-2018 IPR035965 PAS domain superfamily Y11_07261 928b30445b9606b81db781fc8e45c176 507 SUPERFAMILY SSF55785 149 256 2.42E-9 T 13-10-2018 IPR035965 PAS domain superfamily Y11_07261 928b30445b9606b81db781fc8e45c176 507 SUPERFAMILY SSF55785 9 131 7.96E-20 T 13-10-2018 IPR035965 PAS domain superfamily Y11_13911 f4d78d97485b4e925de1ff5b674fd4bd 1329 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 149 260 3.7E-45 T 13-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Y11_13911 f4d78d97485b4e925de1ff5b674fd4bd 1329 Gene3D G3DSA:1.20.5.550 88 139 1.7E-30 T 13-10-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Y11_13911 f4d78d97485b4e925de1ff5b674fd4bd 1329 Gene3D G3DSA:3.40.605.10 663 1119 8.1E-143 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Y11_13911 f4d78d97485b4e925de1ff5b674fd4bd 1329 Pfam PF01619 Proline dehydrogenase 271 570 3.0E-100 T 13-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 Y11_13911 f4d78d97485b4e925de1ff5b674fd4bd 1329 Gene3D G3DSA:3.40.309.10 892 1089 8.1E-143 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Y11_13911 f4d78d97485b4e925de1ff5b674fd4bd 1329 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 889 896 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Y11_13911 f4d78d97485b4e925de1ff5b674fd4bd 1329 SUPERFAMILY SSF53720 641 1117 3.27E-127 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Y11_13911 f4d78d97485b4e925de1ff5b674fd4bd 1329 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 917 928 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Y11_13911 f4d78d97485b4e925de1ff5b674fd4bd 1329 Gene3D G3DSA:3.20.20.220 219 611 2.6E-160 T 13-10-2018 Y11_13911 f4d78d97485b4e925de1ff5b674fd4bd 1329 SUPERFAMILY SSF81935 89 262 4.84E-65 T 13-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Y11_13911 f4d78d97485b4e925de1ff5b674fd4bd 1329 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 611 1120 9.8E-249 T 13-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Y11_13911 f4d78d97485b4e925de1ff5b674fd4bd 1329 Gene3D G3DSA:1.10.1220.10 11 52 1.7E-23 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Y11_13911 f4d78d97485b4e925de1ff5b674fd4bd 1329 Pfam PF00171 Aldehyde dehydrogenase family 667 1111 4.4E-114 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Y11_13911 f4d78d97485b4e925de1ff5b674fd4bd 1329 SUPERFAMILY SSF51730 263 619 1.41E-123 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like Y11_13911 f4d78d97485b4e925de1ff5b674fd4bd 1329 SUPERFAMILY SSF47598 4 45 1.45E-10 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Y11_13911 f4d78d97485b4e925de1ff5b674fd4bd 1329 PIRSF PIRSF000197 75 1329 0.0 T 13-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Y11_15581 320432637da747fca4068c41f133225d 454 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Y11_15581 320432637da747fca4068c41f133225d 454 Gene3D G3DSA:1.10.287.400 377 440 3.3E-33 T 13-10-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Y11_15581 320432637da747fca4068c41f133225d 454 SUPERFAMILY SSF52402 3 186 4.19E-35 T 13-10-2018 Y11_15581 320432637da747fca4068c41f133225d 454 Gene3D G3DSA:3.40.50.620 14 191 2.8E-119 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_15581 320432637da747fca4068c41f133225d 454 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Y11_15581 320432637da747fca4068c41f133225d 454 Gene3D G3DSA:3.90.1260.10 74 367 2.8E-119 T 13-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Y11_15581 320432637da747fca4068c41f133225d 454 SUPERFAMILY SSF69864 190 442 2.22E-79 T 13-10-2018 Y11_15581 320432637da747fca4068c41f133225d 454 Pfam PF00764 Arginosuccinate synthase 16 410 9.0E-58 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Y11_15581 320432637da747fca4068c41f133225d 454 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 450 73.831 T 13-10-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Y11_15581 320432637da747fca4068c41f133225d 454 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 5.2E-166 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Y11_21211 bb73a815d06c64e8ce41261f123a1010 2881 Gene3D G3DSA:1.50.10.140 996 1156 1.4E-10 T 13-10-2018 Y11_21211 bb73a815d06c64e8ce41261f123a1010 2881 SUPERFAMILY SSF74650 2086 2351 3.14E-85 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Y11_21211 bb73a815d06c64e8ce41261f123a1010 2881 Pfam PF06165 Glycosyltransferase family 36 1567 1814 5.4E-67 T 13-10-2018 IPR010383 Glycosyl hydrolase 94 Y11_21211 bb73a815d06c64e8ce41261f123a1010 2881 Pfam PF06165 Glycosyltransferase family 36 2109 2349 3.2E-77 T 13-10-2018 IPR010383 Glycosyl hydrolase 94 Y11_21211 bb73a815d06c64e8ce41261f123a1010 2881 SUPERFAMILY SSF48208 2366 2877 6.8E-95 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Y11_21211 bb73a815d06c64e8ce41261f123a1010 2881 Gene3D G3DSA:1.50.10.140 1370 1526 1.5E-12 T 13-10-2018 Y11_21211 bb73a815d06c64e8ce41261f123a1010 2881 Gene3D G3DSA:2.70.98.40 2088 2384 7.3E-92 T 13-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Y11_21211 bb73a815d06c64e8ce41261f123a1010 2881 Gene3D G3DSA:2.70.98.40 1557 1848 1.3E-74 T 13-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Y11_21211 bb73a815d06c64e8ce41261f123a1010 2881 Pfam PF10091 Putative glucoamylase 1308 1515 3.4E-14 T 13-10-2018 IPR019282 Domain of unknown function DUF2329 Y11_21211 bb73a815d06c64e8ce41261f123a1010 2881 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2379 2805 3.9E-123 T 13-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain Y11_21211 bb73a815d06c64e8ce41261f123a1010 2881 Gene3D G3DSA:1.50.10.10 2393 2805 2.0E-193 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Y11_21211 bb73a815d06c64e8ce41261f123a1010 2881 Gene3D G3DSA:2.60.420.10 2388 2862 2.0E-193 T 13-10-2018 Y11_21211 bb73a815d06c64e8ce41261f123a1010 2881 SUPERFAMILY SSF74650 1556 1817 2.73E-73 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Y11_21211 bb73a815d06c64e8ce41261f123a1010 2881 SMART SM01068 2086 2151 3.5E-34 T 13-10-2018 IPR009342 Putative carbohydrate binding domain Y11_21211 bb73a815d06c64e8ce41261f123a1010 2881 SMART SM01068 1543 1604 8.6E-21 T 13-10-2018 IPR009342 Putative carbohydrate binding domain Y11_03671 6a7fb007bea04fb83bbb8e9455bd8419 321 SUPERFAMILY SSF161098 32 312 2.52E-57 T 13-10-2018 IPR035906 MetI-like superfamily Y11_03671 6a7fb007bea04fb83bbb8e9455bd8419 321 Gene3D G3DSA:1.10.3720.10 33 316 2.3E-55 T 13-10-2018 IPR035906 MetI-like superfamily Y11_03671 6a7fb007bea04fb83bbb8e9455bd8419 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 315 8.1E-23 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_32641 ec8305a433ab6f6cfe33b0239742a25d 342 Gene3D G3DSA:3.40.190.10 116 211 3.4E-50 T 13-10-2018 Y11_32641 ec8305a433ab6f6cfe33b0239742a25d 342 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 38 260 2.0E-22 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Y11_32641 ec8305a433ab6f6cfe33b0239742a25d 342 Gene3D G3DSA:3.40.190.10 40 318 3.4E-50 T 13-10-2018 Y11_32641 ec8305a433ab6f6cfe33b0239742a25d 342 SMART SM00062 38 253 3.1E-21 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_32641 ec8305a433ab6f6cfe33b0239742a25d 342 SUPERFAMILY SSF53850 48 320 3.42E-46 T 13-10-2018 Y11_32641 ec8305a433ab6f6cfe33b0239742a25d 342 Gene3D G3DSA:1.10.8.450 247 286 3.4E-50 T 13-10-2018 Y11_32641 ec8305a433ab6f6cfe33b0239742a25d 342 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 39 334 4.2E-137 T 13-10-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 Y11_41171 5be45352da5f7c8d1184db6516debc5e 1171 Gene3D G3DSA:3.20.20.140 3 281 5.0E-96 T 13-10-2018 Y11_41171 5be45352da5f7c8d1184db6516debc5e 1171 Gene3D G3DSA:1.10.10.1600 444 521 2.3E-34 T 13-10-2018 Y11_41171 5be45352da5f7c8d1184db6516debc5e 1171 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 302 745 2.4E-176 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_41171 5be45352da5f7c8d1184db6516debc5e 1171 Pfam PF01336 OB-fold nucleic acid binding domain 1011 1082 2.0E-7 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Y11_41171 5be45352da5f7c8d1184db6516debc5e 1171 Gene3D G3DSA:2.40.50.140 996 1085 2.3E-5 T 13-10-2018 Y11_41171 5be45352da5f7c8d1184db6516debc5e 1171 SUPERFAMILY SSF89550 17 274 6.28E-18 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Y11_41171 5be45352da5f7c8d1184db6516debc5e 1171 Pfam PF02811 PHP domain 19 182 7.5E-45 T 13-10-2018 IPR004013 PHP domain GO:0003824 Y11_41171 5be45352da5f7c8d1184db6516debc5e 1171 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 17 1042 0.0 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_41171 5be45352da5f7c8d1184db6516debc5e 1171 Pfam PF14579 Helix-hairpin-helix motif 819 908 9.8E-24 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_41171 5be45352da5f7c8d1184db6516debc5e 1171 SMART SM00481 18 85 2.0E-28 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Y11_03521 26b8d5b13639f99be4edca05860eabd0 396 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 285 376 1.1E-19 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_03521 26b8d5b13639f99be4edca05860eabd0 396 SMART SM00936 285 376 7.0E-30 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_03521 26b8d5b13639f99be4edca05860eabd0 396 SUPERFAMILY SSF69189 285 378 1.67E-23 T 13-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_03521 26b8d5b13639f99be4edca05860eabd0 396 Gene3D G3DSA:3.40.710.10 25 284 4.0E-90 T 13-10-2018 Y11_03521 26b8d5b13639f99be4edca05860eabd0 396 Gene3D G3DSA:2.60.410.10 285 376 2.3E-25 T 13-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_03521 26b8d5b13639f99be4edca05860eabd0 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 141 1.3E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Y11_03521 26b8d5b13639f99be4edca05860eabd0 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 164 1.3E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Y11_03521 26b8d5b13639f99be4edca05860eabd0 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.3E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Y11_03521 26b8d5b13639f99be4edca05860eabd0 396 SUPERFAMILY SSF56601 8 285 1.1E-80 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_03521 26b8d5b13639f99be4edca05860eabd0 396 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 32 265 6.6E-97 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Y11_38191 efee405a2c65ddfbccafd82371f992fc 453 Pfam PF00990 Diguanylate cyclase, GGDEF domain 259 412 4.2E-49 T 13-10-2018 IPR000160 GGDEF domain Y11_38191 efee405a2c65ddfbccafd82371f992fc 453 Pfam PF17152 Periplasmic sensor domain 55 156 1.3E-31 T 13-10-2018 IPR033417 Periplasmic sensor domain CHASE8 Y11_38191 efee405a2c65ddfbccafd82371f992fc 453 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 412 8.7E-45 T 13-10-2018 IPR000160 GGDEF domain Y11_38191 efee405a2c65ddfbccafd82371f992fc 453 Gene3D G3DSA:3.30.70.270 253 418 1.3E-54 T 13-10-2018 Y11_38191 efee405a2c65ddfbccafd82371f992fc 453 SUPERFAMILY SSF55073 264 414 4.71E-47 T 13-10-2018 IPR029787 Nucleotide cyclase Y11_38191 efee405a2c65ddfbccafd82371f992fc 453 SMART SM00267 248 420 4.3E-63 T 13-10-2018 IPR000160 GGDEF domain Y11_08221 077edc9f442506cc368fa3cb849567f7 416 Gene3D G3DSA:3.90.1150.10 18 408 7.6E-166 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_08221 077edc9f442506cc368fa3cb849567f7 416 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 227 246 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Y11_08221 077edc9f442506cc368fa3cb849567f7 416 Pfam PF00266 Aminotransferase class-V 36 404 1.7E-154 T 13-10-2018 IPR000192 Aminotransferase class V domain Y11_08221 077edc9f442506cc368fa3cb849567f7 416 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 17 415 2.4E-176 T 13-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Y11_08221 077edc9f442506cc368fa3cb849567f7 416 SUPERFAMILY SSF53383 15 411 8.11E-122 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_08221 077edc9f442506cc368fa3cb849567f7 416 Gene3D G3DSA:3.40.640.10 46 307 7.6E-166 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_23411 21f0d9e99c4346f9fd52a983d7311969 246 Pfam PF11101 Protein of unknown function (DUF2884) 29 245 3.0E-48 T 13-10-2018 IPR021307 Protein of unknown function DUF2884 Y11_33041 56a7de53caec126398e32f9a63c8b19e 167 SUPERFAMILY SSF54768 9 75 3.87E-23 T 13-10-2018 Y11_33041 56a7de53caec126398e32f9a63c8b19e 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.8E-28 T 13-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Y11_33041 56a7de53caec126398e32f9a63c8b19e 167 Gene3D G3DSA:3.30.160.20 1 73 2.3E-33 T 13-10-2018 Y11_33041 56a7de53caec126398e32f9a63c8b19e 167 SUPERFAMILY SSF54211 79 159 5.06E-27 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_33041 56a7de53caec126398e32f9a63c8b19e 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 2.4E-70 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Y11_33041 56a7de53caec126398e32f9a63c8b19e 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 13-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site Y11_33041 56a7de53caec126398e32f9a63c8b19e 167 Gene3D G3DSA:3.30.230.10 74 167 1.8E-38 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y11_33041 56a7de53caec126398e32f9a63c8b19e 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.59 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Y11_33041 56a7de53caec126398e32f9a63c8b19e 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 4.3E-30 T 13-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Y11_34971 103458ee887120497b598d60d08870c9 376 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 5 369 1.8E-163 T 13-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 Y11_34971 103458ee887120497b598d60d08870c9 376 Gene3D G3DSA:3.20.20.70 13 366 5.5E-105 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_34971 103458ee887120497b598d60d08870c9 376 Pfam PF04055 Radical SAM superfamily 83 220 1.7E-10 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_34971 103458ee887120497b598d60d08870c9 376 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 259 361 2.8E-23 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Y11_34971 103458ee887120497b598d60d08870c9 376 SUPERFAMILY SSF102114 39 362 3.53E-52 T 13-10-2018 Y11_34971 103458ee887120497b598d60d08870c9 376 SMART SM00876 259 362 1.5E-30 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Y11_36591 38f98084f11a8f15ed52f2b14b07f09b 343 Pfam PF00512 His Kinase A (phospho-acceptor) domain 128 185 5.9E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_36591 38f98084f11a8f15ed52f2b14b07f09b 343 SMART SM00388 126 186 3.6E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_36591 38f98084f11a8f15ed52f2b14b07f09b 343 Gene3D G3DSA:1.10.287.130 77 187 3.5E-18 T 13-10-2018 Y11_36591 38f98084f11a8f15ed52f2b14b07f09b 343 SMART SM00387 232 341 1.1E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_36591 38f98084f11a8f15ed52f2b14b07f09b 343 Gene3D G3DSA:3.30.565.10 195 342 5.9E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_36591 38f98084f11a8f15ed52f2b14b07f09b 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 232 339 7.0E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_36591 38f98084f11a8f15ed52f2b14b07f09b 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 318 2.6E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_36591 38f98084f11a8f15ed52f2b14b07f09b 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 269 283 2.6E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_36591 38f98084f11a8f15ed52f2b14b07f09b 343 SUPERFAMILY SSF55874 176 339 6.29E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_36591 38f98084f11a8f15ed52f2b14b07f09b 343 SUPERFAMILY SSF47384 111 184 3.92E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_10041 efd6724e2a69d3894e984e6a337cda96 337 Gene3D G3DSA:1.20.1530.20 7 327 4.6E-32 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily Y11_10041 efd6724e2a69d3894e984e6a337cda96 337 PIRSF PIRSF026166 1 334 2.4E-135 T 13-10-2018 IPR016833 Putative sodium bile acid cotransporter Y11_10041 efd6724e2a69d3894e984e6a337cda96 337 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 319 2.9E-103 T 13-10-2018 IPR016833 Putative sodium bile acid cotransporter Y11_36611 3201be00d06a1b8493b363c32d62ad2c 482 Gene3D G3DSA:3.40.710.10 249 482 2.2E-68 T 13-10-2018 Y11_36611 3201be00d06a1b8493b363c32d62ad2c 482 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 52 452 1.6E-169 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_36611 3201be00d06a1b8493b363c32d62ad2c 482 Gene3D G3DSA:3.50.80.20 87 186 1.9E-22 T 13-10-2018 Y11_36611 3201be00d06a1b8493b363c32d62ad2c 482 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 26 473 1.4E-164 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_36611 3201be00d06a1b8493b363c32d62ad2c 482 SUPERFAMILY SSF56601 28 479 9.15E-104 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_36611 3201be00d06a1b8493b363c32d62ad2c 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 291 313 1.9E-38 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_36611 3201be00d06a1b8493b363c32d62ad2c 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 350 364 1.9E-38 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_36611 3201be00d06a1b8493b363c32d62ad2c 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 429 442 1.9E-38 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_36611 3201be00d06a1b8493b363c32d62ad2c 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 365 379 1.9E-38 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_36611 3201be00d06a1b8493b363c32d62ad2c 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 63 82 1.9E-38 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_27961 8fe6e4b458b27e2a69cb04ff0ffcdfae 243 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Y11_27961 8fe6e4b458b27e2a69cb04ff0ffcdfae 243 Gene3D G3DSA:3.40.30.10 171 241 4.2E-25 T 13-10-2018 Y11_27961 8fe6e4b458b27e2a69cb04ff0ffcdfae 243 PRINTS PR00160 Glutaredoxin signature 173 191 4.9E-15 T 13-10-2018 IPR014025 Glutaredoxin subgroup Y11_27961 8fe6e4b458b27e2a69cb04ff0ffcdfae 243 PRINTS PR00160 Glutaredoxin signature 228 241 4.9E-15 T 13-10-2018 IPR014025 Glutaredoxin subgroup Y11_27961 8fe6e4b458b27e2a69cb04ff0ffcdfae 243 PRINTS PR00160 Glutaredoxin signature 214 227 4.9E-15 T 13-10-2018 IPR014025 Glutaredoxin subgroup Y11_27961 8fe6e4b458b27e2a69cb04ff0ffcdfae 243 Gene3D G3DSA:3.40.30.10 4 165 1.0E-62 T 13-10-2018 Y11_27961 8fe6e4b458b27e2a69cb04ff0ffcdfae 243 Pfam PF08534 Redoxin 5 160 2.7E-33 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Y11_27961 8fe6e4b458b27e2a69cb04ff0ffcdfae 243 SUPERFAMILY SSF52833 2 242 4.21E-46 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_27961 8fe6e4b458b27e2a69cb04ff0ffcdfae 243 Pfam PF00462 Glutaredoxin 173 231 5.3E-19 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Y11_27961 8fe6e4b458b27e2a69cb04ff0ffcdfae 243 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 241 5.0E-40 T 13-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 Y11_15011 7885a1cd659b1f70f847a7db0bcfd55d 421 Gene3D G3DSA:1.10.443.10 204 396 1.4E-15 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Y11_15011 7885a1cd659b1f70f847a7db0bcfd55d 421 Gene3D G3DSA:1.10.150.130 89 202 8.3E-31 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Y11_15011 7885a1cd659b1f70f847a7db0bcfd55d 421 Gene3D G3DSA:3.30.160.390 1 88 2.1E-32 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Y11_15011 7885a1cd659b1f70f847a7db0bcfd55d 421 Pfam PF13356 Arm DNA-binding domain 6 87 8.6E-17 T 13-10-2018 IPR025166 Integrase, DNA-binding domain Y11_15011 7885a1cd659b1f70f847a7db0bcfd55d 421 Pfam PF00589 Phage integrase family 206 383 1.8E-18 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Y11_15011 7885a1cd659b1f70f847a7db0bcfd55d 421 SUPERFAMILY SSF56349 97 393 1.56E-54 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Y11_40501 336ac7fb3657530e2de6309466b85601 207 Gene3D G3DSA:1.10.287.950 1 189 1.2E-49 T 13-10-2018 Y11_40501 336ac7fb3657530e2de6309466b85601 207 SMART SM00283 1 188 8.7E-21 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_40501 336ac7fb3657530e2de6309466b85601 207 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 2 156 4.8E-40 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_40501 336ac7fb3657530e2de6309466b85601 207 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 116 145 8.3E-29 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_40501 336ac7fb3657530e2de6309466b85601 207 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 97 8.3E-29 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_40501 336ac7fb3657530e2de6309466b85601 207 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 39 66 8.3E-29 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_40501 336ac7fb3657530e2de6309466b85601 207 SUPERFAMILY SSF58104 2 189 1.7E-45 T 13-10-2018 Y11_27211 74aeca7268835c012f399b0bc72109f6 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Y11_27211 74aeca7268835c012f399b0bc72109f6 449 SUPERFAMILY SSF56059 83 347 8.08E-69 T 13-10-2018 Y11_27211 74aeca7268835c012f399b0bc72109f6 449 SUPERFAMILY SSF52440 1 113 3.67E-46 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Y11_27211 74aeca7268835c012f399b0bc72109f6 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 2.5E-85 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Y11_27211 74aeca7268835c012f399b0bc72109f6 449 Gene3D G3DSA:3.40.50.20 1 85 4.4E-34 T 13-10-2018 Y11_27211 74aeca7268835c012f399b0bc72109f6 449 Gene3D G3DSA:3.30.470.20 86 433 9.5E-158 T 13-10-2018 Y11_27211 74aeca7268835c012f399b0bc72109f6 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.3E-43 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Y11_27211 74aeca7268835c012f399b0bc72109f6 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 3.1E-250 T 13-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 Y11_27211 74aeca7268835c012f399b0bc72109f6 449 SUPERFAMILY SSF51246 331 444 1.31E-43 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Y11_27211 74aeca7268835c012f399b0bc72109f6 449 Gene3D G3DSA:3.30.1490.20 131 203 9.5E-158 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Y11_27211 74aeca7268835c012f399b0bc72109f6 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Y11_27211 74aeca7268835c012f399b0bc72109f6 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.3E-38 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Y11_27211 74aeca7268835c012f399b0bc72109f6 449 SMART SM00878 336 441 3.2E-65 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Y11_18591 538de14b6de754469c70c87a7c4186b5 407 Pfam PF02817 e3 binding domain 114 146 1.2E-11 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Y11_18591 538de14b6de754469c70c87a7c4186b5 407 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 407 2.7E-189 T 13-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Y11_18591 538de14b6de754469c70c87a7c4186b5 407 SUPERFAMILY SSF51230 2 91 3.14E-24 T 13-10-2018 IPR011053 Single hybrid motif Y11_18591 538de14b6de754469c70c87a7c4186b5 407 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Y11_18591 538de14b6de754469c70c87a7c4186b5 407 Gene3D G3DSA:2.40.50.100 2 79 1.1E-23 T 13-10-2018 Y11_18591 538de14b6de754469c70c87a7c4186b5 407 SUPERFAMILY SSF47005 107 149 1.29E-10 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Y11_18591 538de14b6de754469c70c87a7c4186b5 407 Gene3D G3DSA:4.10.320.10 103 152 1.8E-21 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Y11_18591 538de14b6de754469c70c87a7c4186b5 407 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 177 405 1.1E-80 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Y11_18591 538de14b6de754469c70c87a7c4186b5 407 SUPERFAMILY SSF52777 177 406 9.78E-89 T 13-10-2018 Y11_18591 538de14b6de754469c70c87a7c4186b5 407 Gene3D G3DSA:3.30.559.10 175 407 1.5E-96 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Y11_18591 538de14b6de754469c70c87a7c4186b5 407 Pfam PF00364 Biotin-requiring enzyme 5 77 2.6E-19 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Y11_16811 8bc1359cc0a592b0757c3c0fc511ba13 528 Pfam PF00571 CBS domain 375 424 2.8E-6 T 13-10-2018 IPR000644 CBS domain Y11_16811 8bc1359cc0a592b0757c3c0fc511ba13 528 Pfam PF00571 CBS domain 304 360 0.0019 T 13-10-2018 IPR000644 CBS domain Y11_16811 8bc1359cc0a592b0757c3c0fc511ba13 528 SUPERFAMILY SSF56176 439 522 3.54E-21 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Y11_16811 8bc1359cc0a592b0757c3c0fc511ba13 528 SUPERFAMILY SSF54631 292 426 9.47E-25 T 13-10-2018 Y11_16811 8bc1359cc0a592b0757c3c0fc511ba13 528 Gene3D G3DSA:3.10.580.10 285 436 8.6E-40 T 13-10-2018 Y11_16811 8bc1359cc0a592b0757c3c0fc511ba13 528 Pfam PF03471 Transporter associated domain 442 518 7.1E-17 T 13-10-2018 IPR005170 Transporter-associated domain Y11_16811 8bc1359cc0a592b0757c3c0fc511ba13 528 SMART SM01091 441 520 6.4E-25 T 13-10-2018 IPR005170 Transporter-associated domain Y11_16811 8bc1359cc0a592b0757c3c0fc511ba13 528 Gene3D G3DSA:3.30.465.10 437 520 2.7E-19 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Y11_16811 8bc1359cc0a592b0757c3c0fc511ba13 528 Pfam PF03741 Integral membrane protein TerC family 15 203 6.3E-49 T 13-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 Y11_38101 fa1511a6ca2bdc9235180000fd37f3c7 325 Gene3D G3DSA:1.10.150.210 121 183 3.1E-117 T 13-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 Y11_38101 fa1511a6ca2bdc9235180000fd37f3c7 325 SUPERFAMILY SSF56784 112 316 6.1E-48 T 13-10-2018 IPR036412 HAD-like superfamily Y11_38101 fa1511a6ca2bdc9235180000fd37f3c7 325 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 98 316 1.0E-88 T 13-10-2018 Y11_38101 fa1511a6ca2bdc9235180000fd37f3c7 325 Gene3D G3DSA:3.30.70.2020 38 320 3.1E-117 T 13-10-2018 Y11_38101 fa1511a6ca2bdc9235180000fd37f3c7 325 Pfam PF12710 haloacid dehalogenase-like hydrolase 150 282 8.6E-17 T 13-10-2018 Y11_38101 fa1511a6ca2bdc9235180000fd37f3c7 325 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 283 5.3E-24 T 13-10-2018 Y11_38101 fa1511a6ca2bdc9235180000fd37f3c7 325 Gene3D G3DSA:3.40.50.1000 107 316 3.1E-117 T 13-10-2018 IPR023214 HAD superfamily Y11_03381 06214198af3e7d54a514c41dcb15a0cc 290 SUPERFAMILY SSF46785 2 109 3.7E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_03381 06214198af3e7d54a514c41dcb15a0cc 290 Gene3D G3DSA:3.40.190.290 89 289 4.6E-45 T 13-10-2018 Y11_03381 06214198af3e7d54a514c41dcb15a0cc 290 Pfam PF03466 LysR substrate binding domain 86 289 3.6E-47 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_03381 06214198af3e7d54a514c41dcb15a0cc 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.0E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_03381 06214198af3e7d54a514c41dcb15a0cc 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.1E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_03381 06214198af3e7d54a514c41dcb15a0cc 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.1E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_03381 06214198af3e7d54a514c41dcb15a0cc 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.1E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_03381 06214198af3e7d54a514c41dcb15a0cc 290 Gene3D G3DSA:1.10.10.10 1 84 1.8E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_03381 06214198af3e7d54a514c41dcb15a0cc 290 SUPERFAMILY SSF53850 89 289 3.75E-47 T 13-10-2018 Y11_40691 2c46ad633f284d4a8dfaf9eb5570256d 264 Pfam PF00303 Thymidylate synthase 2 264 1.3E-126 T 13-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Y11_40691 2c46ad633f284d4a8dfaf9eb5570256d 264 SUPERFAMILY SSF55831 1 264 1.83E-130 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Y11_40691 2c46ad633f284d4a8dfaf9eb5570256d 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 8.1E-93 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Y11_40691 2c46ad633f284d4a8dfaf9eb5570256d 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 2.5E-42 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Y11_40691 2c46ad633f284d4a8dfaf9eb5570256d 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 13-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Y11_40691 2c46ad633f284d4a8dfaf9eb5570256d 264 Gene3D G3DSA:3.30.572.10 1 264 5.4E-135 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Y11_40691 2c46ad633f284d4a8dfaf9eb5570256d 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 39.949 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Y11_40691 2c46ad633f284d4a8dfaf9eb5570256d 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 2.3E-47 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Y11_40691 2c46ad633f284d4a8dfaf9eb5570256d 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.3E-47 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Y11_40691 2c46ad633f284d4a8dfaf9eb5570256d 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 2.3E-47 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Y11_40691 2c46ad633f284d4a8dfaf9eb5570256d 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 2.3E-47 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Y11_40691 2c46ad633f284d4a8dfaf9eb5570256d 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.3E-47 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Y11_18021 80ec4a12a71a456c9b94883722e4288a 583 Gene3D G3DSA:3.40.50.300 321 559 2.5E-64 T 13-10-2018 Y11_18021 80ec4a12a71a456c9b94883722e4288a 583 Gene3D G3DSA:3.40.50.300 4 240 1.8E-58 T 13-10-2018 Y11_18021 80ec4a12a71a456c9b94883722e4288a 583 Pfam PF00005 ABC transporter 348 491 4.2E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_18021 80ec4a12a71a456c9b94883722e4288a 583 SMART SM00382 356 537 2.4E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_18021 80ec4a12a71a456c9b94883722e4288a 583 SMART SM00382 34 268 1.9E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_18021 80ec4a12a71a456c9b94883722e4288a 583 SUPERFAMILY SSF52540 7 230 2.05E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_18021 80ec4a12a71a456c9b94883722e4288a 583 SUPERFAMILY SSF52540 326 551 1.92E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_18021 80ec4a12a71a456c9b94883722e4288a 583 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_18021 80ec4a12a71a456c9b94883722e4288a 583 Pfam PF00005 ABC transporter 28 167 3.8E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_23151 cd46469d2b411cb39e1e54c33805795e 338 PIRSF PIRSF000149 1 337 1.7E-127 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23151 cd46469d2b411cb39e1e54c33805795e 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 5.5E-33 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23151 cd46469d2b411cb39e1e54c33805795e 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 4.5E-52 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23151 cd46469d2b411cb39e1e54c33805795e 338 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 7.5E-183 T 13-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 Y11_23151 cd46469d2b411cb39e1e54c33805795e 338 SMART SM00846 3 155 6.3E-79 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23151 cd46469d2b411cb39e1e54c33805795e 338 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 64.183 T 13-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 Y11_23151 cd46469d2b411cb39e1e54c33805795e 338 Gene3D G3DSA:3.30.360.10 154 318 6.9E-129 T 13-10-2018 Y11_23151 cd46469d2b411cb39e1e54c33805795e 338 Gene3D G3DSA:3.40.50.720 4 328 6.9E-129 T 13-10-2018 Y11_23151 cd46469d2b411cb39e1e54c33805795e 338 SUPERFAMILY SSF55347 155 317 1.31E-54 T 13-10-2018 Y11_23151 cd46469d2b411cb39e1e54c33805795e 338 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23151 cd46469d2b411cb39e1e54c33805795e 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 1.6E-29 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23151 cd46469d2b411cb39e1e54c33805795e 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 1.6E-29 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23151 cd46469d2b411cb39e1e54c33805795e 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 1.6E-29 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23151 cd46469d2b411cb39e1e54c33805795e 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 1.6E-29 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23151 cd46469d2b411cb39e1e54c33805795e 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 1.6E-29 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23151 cd46469d2b411cb39e1e54c33805795e 338 SUPERFAMILY SSF51735 1 174 8.34E-54 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_24821 02117207aba58515afc005604456d43f 197 Pfam PF02525 Flavodoxin-like fold 3 188 2.0E-35 T 13-10-2018 IPR003680 Flavodoxin-like fold Y11_24821 02117207aba58515afc005604456d43f 197 Gene3D G3DSA:3.40.50.360 1 193 5.8E-64 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_24821 02117207aba58515afc005604456d43f 197 SUPERFAMILY SSF52218 1 193 2.0E-42 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_p0491 c25911fd8834c1ad691c86ccaa97fe81 89 SUPERFAMILY SSF46689 2 82 9.68E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_p0491 c25911fd8834c1ad691c86ccaa97fe81 89 Pfam PF01527 Transposase 2 63 1.5E-8 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Y11_00561 721633a6d945c2cdabc2355082d708ec 302 Gene3D G3DSA:3.30.420.40 6 295 3.4E-73 T 13-10-2018 Y11_00561 721633a6d945c2cdabc2355082d708ec 302 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 2 302 47.723 T 13-10-2018 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138 Y11_00561 721633a6d945c2cdabc2355082d708ec 302 SUPERFAMILY SSF53067 2 300 2.69E-49 T 13-10-2018 Y11_00561 721633a6d945c2cdabc2355082d708ec 302 Gene3D G3DSA:3.30.420.40 119 282 3.4E-73 T 13-10-2018 Y11_00561 721633a6d945c2cdabc2355082d708ec 302 Pfam PF00480 ROK family 5 300 4.7E-66 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Y11_00561 721633a6d945c2cdabc2355082d708ec 302 ProSitePatterns PS01125 ROK family signature. 141 168 - T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Y11_42721 3fe6304556c3d10218ae6877b215bed5 128 Gene3D G3DSA:3.90.1010.10 1 128 1.6E-58 T 13-10-2018 Y11_42721 3fe6304556c3d10218ae6877b215bed5 128 Pfam PF01592 NifU-like N terminal domain 2 126 1.7E-56 T 13-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Y11_42721 3fe6304556c3d10218ae6877b215bed5 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.4E-68 T 13-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Y11_42721 3fe6304556c3d10218ae6877b215bed5 128 SUPERFAMILY SSF82649 1 125 1.12E-47 T 13-10-2018 Y11_10021 07dee550043cb4ee27fa0fcf066c02ba 392 Gene3D G3DSA:3.40.640.10 42 284 1.2E-126 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_10021 07dee550043cb4ee27fa0fcf066c02ba 392 SUPERFAMILY SSF53383 1 384 1.46E-87 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_10021 07dee550043cb4ee27fa0fcf066c02ba 392 Gene3D G3DSA:3.90.1150.10 32 379 1.2E-126 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_10021 07dee550043cb4ee27fa0fcf066c02ba 392 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 385 1.1E-114 T 13-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 Y11_10021 07dee550043cb4ee27fa0fcf066c02ba 392 Pfam PF00155 Aminotransferase class I and II 30 380 7.3E-52 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_05741 ffa9244ce79c2f8e320a22261983aa0b 319 Gene3D G3DSA:2.40.128.140 23 319 2.7E-94 T 13-10-2018 IPR037107 Putative outer membrane protein superfamily Y11_05741 ffa9244ce79c2f8e320a22261983aa0b 319 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 54 318 2.2E-36 T 13-10-2018 IPR018707 Protein of unknown function DUF2219 Y11_00621 ce5ec7e12b04492bb71c5615207590f4 278 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 272 1.5E-113 T 13-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 Y11_00621 ce5ec7e12b04492bb71c5615207590f4 278 SUPERFAMILY SSF161098 17 266 5.1E-57 T 13-10-2018 IPR035906 MetI-like superfamily Y11_00621 ce5ec7e12b04492bb71c5615207590f4 278 Gene3D G3DSA:1.10.3720.10 14 273 1.5E-69 T 13-10-2018 IPR035906 MetI-like superfamily Y11_00621 ce5ec7e12b04492bb71c5615207590f4 278 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 6 270 5.1E-110 T 13-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 Y11_00621 ce5ec7e12b04492bb71c5615207590f4 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 275 9.4E-30 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 Gene3D G3DSA:3.40.120.10 175 362 3.9E-65 T 13-10-2018 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 47.618 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 Gene3D G3DSA:3.40.120.10 3 154 3.9E-48 T 13-10-2018 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 Gene3D G3DSA:3.40.120.10 257 339 3.9E-65 T 13-10-2018 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 SUPERFAMILY SSF53738 156 256 1.73E-30 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 Gene3D G3DSA:3.30.310.50 370 446 1.5E-24 T 13-10-2018 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 SUPERFAMILY SSF55957 357 444 7.19E-21 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 2.5E-194 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 5.2E-45 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 SUPERFAMILY SSF53738 258 365 5.49E-31 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 2.2E-20 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 364 3.6E-32 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 5.7E-15 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 5.7E-15 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 5.7E-15 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 2.3E-13 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_36671 60bcdf47729926e4aa60afb2e824bc1b 446 SUPERFAMILY SSF53738 2 181 4.32E-49 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_01441 9ddcce406d4e9b7be5372bc14bdb87c5 745 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 508 533 - T 13-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Y11_01441 9ddcce406d4e9b7be5372bc14bdb87c5 745 SUPERFAMILY SSF51735 327 508 2.23E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_01441 9ddcce406d4e9b7be5372bc14bdb87c5 745 Gene3D G3DSA:3.40.50.720 328 513 2.1E-60 T 13-10-2018 Y11_01441 9ddcce406d4e9b7be5372bc14bdb87c5 745 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 20 730 53.814 T 13-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Y11_01441 9ddcce406d4e9b7be5372bc14bdb87c5 745 Gene3D G3DSA:1.10.1040.50 514 725 2.1E-68 T 13-10-2018 Y11_01441 9ddcce406d4e9b7be5372bc14bdb87c5 745 Gene3D G3DSA:3.90.226.10 22 323 8.3E-97 T 13-10-2018 Y11_01441 9ddcce406d4e9b7be5372bc14bdb87c5 745 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 511 604 2.1E-24 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Y11_01441 9ddcce406d4e9b7be5372bc14bdb87c5 745 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 642 726 2.0E-6 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Y11_01441 9ddcce406d4e9b7be5372bc14bdb87c5 745 Pfam PF00378 Enoyl-CoA hydratase/isomerase 45 223 6.0E-41 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Y11_01441 9ddcce406d4e9b7be5372bc14bdb87c5 745 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 26 730 0.0 T 13-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Y11_01441 9ddcce406d4e9b7be5372bc14bdb87c5 745 SUPERFAMILY SSF48179 641 730 6.89E-26 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_01441 9ddcce406d4e9b7be5372bc14bdb87c5 745 SUPERFAMILY SSF48179 511 613 6.8E-29 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_01441 9ddcce406d4e9b7be5372bc14bdb87c5 745 SUPERFAMILY SSF52096 24 317 3.73E-65 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Y11_01441 9ddcce406d4e9b7be5372bc14bdb87c5 745 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 330 508 4.8E-57 T 13-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Y11_19061 8fe0429195dcf1b8460758abb391d492 461 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 1 427 71.285 T 13-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Y11_19061 8fe0429195dcf1b8460758abb391d492 461 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 138 158 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Y11_19061 8fe0429195dcf1b8460758abb391d492 461 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 1 424 5.1E-149 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Y11_19061 8fe0429195dcf1b8460758abb391d492 461 SMART SM00729 134 354 6.5E-64 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Y11_19061 8fe0429195dcf1b8460758abb391d492 461 Pfam PF00919 Uncharacterized protein family UPF0004 1 91 1.0E-21 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Y11_19061 8fe0429195dcf1b8460758abb391d492 461 Pfam PF01938 TRAM domain 365 427 4.6E-18 T 13-10-2018 IPR002792 TRAM domain Y11_19061 8fe0429195dcf1b8460758abb391d492 461 Gene3D G3DSA:3.80.30.20 132 365 2.4E-84 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Y11_19061 8fe0429195dcf1b8460758abb391d492 461 Gene3D G3DSA:3.40.50.12160 1 123 1.0E-25 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Y11_19061 8fe0429195dcf1b8460758abb391d492 461 SUPERFAMILY SSF102114 113 360 4.45E-64 T 13-10-2018 Y11_19061 8fe0429195dcf1b8460758abb391d492 461 Pfam PF04055 Radical SAM superfamily 138 312 3.2E-27 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_19061 8fe0429195dcf1b8460758abb391d492 461 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 1 425 1.9E-199 T 13-10-2018 Y11_33701 5d88bb84d980c46abc2d4e20af65ae4e 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 189 2.7E-58 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Y11_33701 5d88bb84d980c46abc2d4e20af65ae4e 420 SUPERFAMILY SSF51735 5 198 9.24E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_33701 5d88bb84d980c46abc2d4e20af65ae4e 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 4.4E-19 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Y11_33701 5d88bb84d980c46abc2d4e20af65ae4e 420 Gene3D G3DSA:3.40.50.720 2 202 5.9E-64 T 13-10-2018 Y11_33701 5d88bb84d980c46abc2d4e20af65ae4e 420 PIRSF PIRSF000124 4 418 5.0E-74 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Y11_33701 5d88bb84d980c46abc2d4e20af65ae4e 420 Gene3D G3DSA:3.40.50.720 205 420 2.4E-59 T 13-10-2018 Y11_33701 5d88bb84d980c46abc2d4e20af65ae4e 420 SMART SM00984 324 420 2.0E-24 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Y11_33701 5d88bb84d980c46abc2d4e20af65ae4e 420 PIRSF PIRSF500136 1 420 8.1E-148 T 13-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 Y11_33701 5d88bb84d980c46abc2d4e20af65ae4e 420 SUPERFAMILY SSF48179 206 298 1.62E-27 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_33701 5d88bb84d980c46abc2d4e20af65ae4e 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 1.3E-118 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Y11_33701 5d88bb84d980c46abc2d4e20af65ae4e 420 SUPERFAMILY SSF52413 311 419 5.1E-26 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Y11_33701 5d88bb84d980c46abc2d4e20af65ae4e 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 3.0E-26 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Y11_33701 5d88bb84d980c46abc2d4e20af65ae4e 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 79.35 T 13-10-2018 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335 Y11_39521 dd9eaf28a0e65a97eeb0b759f0bedb4c 284 Gene3D G3DSA:3.40.50.620 1 179 2.0E-80 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_39521 dd9eaf28a0e65a97eeb0b759f0bedb4c 284 Gene3D G3DSA:3.30.1300.10 180 283 1.9E-32 T 13-10-2018 Y11_39521 dd9eaf28a0e65a97eeb0b759f0bedb4c 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.21 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Y11_39521 dd9eaf28a0e65a97eeb0b759f0bedb4c 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 1.4E-115 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Y11_39521 dd9eaf28a0e65a97eeb0b759f0bedb4c 284 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 62 5.1E-7 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Y11_39521 dd9eaf28a0e65a97eeb0b759f0bedb4c 284 SUPERFAMILY SSF52374 1 281 1.69E-106 T 13-10-2018 Y11_39521 dd9eaf28a0e65a97eeb0b759f0bedb4c 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.9E-103 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Y11_41211 fb346009aed55fd3acdce563aad41d29 461 Pfam PF01171 PP-loop family 24 202 8.0E-58 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Y11_41211 fb346009aed55fd3acdce563aad41d29 461 Pfam PF09179 TilS substrate binding domain 252 319 8.8E-18 T 13-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Y11_41211 fb346009aed55fd3acdce563aad41d29 461 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 383 423 1.8E-12 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Y11_41211 fb346009aed55fd3acdce563aad41d29 461 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 12 311 23.125 T 13-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Y11_41211 fb346009aed55fd3acdce563aad41d29 461 Gene3D G3DSA:1.20.59.20 238 322 5.9E-28 T 13-10-2018 Y11_41211 fb346009aed55fd3acdce563aad41d29 461 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 24 207 5.6E-53 T 13-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Y11_41211 fb346009aed55fd3acdce563aad41d29 461 SUPERFAMILY SSF56037 347 453 2.62E-31 T 13-10-2018 Y11_41211 fb346009aed55fd3acdce563aad41d29 461 Gene3D G3DSA:3.40.50.620 17 237 3.2E-69 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_41211 fb346009aed55fd3acdce563aad41d29 461 Pfam PF11734 TilS substrate C-terminal domain 380 451 2.7E-26 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Y11_41211 fb346009aed55fd3acdce563aad41d29 461 SUPERFAMILY SSF82829 238 323 4.71E-24 T 13-10-2018 Y11_41211 fb346009aed55fd3acdce563aad41d29 461 SMART SM00977 379 451 8.8E-26 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Y11_41211 fb346009aed55fd3acdce563aad41d29 461 SUPERFAMILY SSF52402 16 237 5.29E-61 T 13-10-2018 Y11_01871 1e9563b3b6940f2f7b12e3d321010e56 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 253 1.5E-94 T 13-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 Y11_01871 1e9563b3b6940f2f7b12e3d321010e56 260 Gene3D G3DSA:3.40.190.10 29 252 2.2E-85 T 13-10-2018 Y11_01871 1e9563b3b6940f2f7b12e3d321010e56 260 Gene3D G3DSA:3.40.190.10 113 213 2.2E-85 T 13-10-2018 Y11_01871 1e9563b3b6940f2f7b12e3d321010e56 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site Y11_01871 1e9563b3b6940f2f7b12e3d321010e56 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 1.0E-61 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_01871 1e9563b3b6940f2f7b12e3d321010e56 260 SMART SM00062 27 256 4.2E-72 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_01871 1e9563b3b6940f2f7b12e3d321010e56 260 SUPERFAMILY SSF53850 4 257 6.05E-65 T 13-10-2018 Y11_10891 c414bc6c2625e17f5809aeac9e16c7a4 98 Gene3D G3DSA:3.30.70.1060 1 98 7.4E-39 T 13-10-2018 Y11_10891 c414bc6c2625e17f5809aeac9e16c7a4 98 Pfam PF03795 YCII-related domain 1 94 6.3E-29 T 13-10-2018 IPR005545 YCII-related Y11_10891 c414bc6c2625e17f5809aeac9e16c7a4 98 SUPERFAMILY SSF54909 1 98 1.59E-31 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Y11_38251 3cb54efd454bbb02a35e118a7a7cfa4d 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 1.2E-57 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Y11_38251 3cb54efd454bbb02a35e118a7a7cfa4d 215 SMART SM00855 3 157 3.0E-22 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Y11_38251 3cb54efd454bbb02a35e118a7a7cfa4d 215 Gene3D G3DSA:3.40.50.1240 1 212 6.2E-57 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Y11_38251 3cb54efd454bbb02a35e118a7a7cfa4d 215 PIRSF PIRSF000709 2 175 6.8E-12 T 13-10-2018 Y11_38251 3cb54efd454bbb02a35e118a7a7cfa4d 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 13-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Y11_38251 3cb54efd454bbb02a35e118a7a7cfa4d 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 50.832 T 13-10-2018 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 Y11_38251 3cb54efd454bbb02a35e118a7a7cfa4d 215 SUPERFAMILY SSF53254 1 208 1.19E-56 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Y11_12501 50bcff8249cc5022ba82c9eb1198dda3 566 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 13-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 Y11_12501 50bcff8249cc5022ba82c9eb1198dda3 566 Gene3D G3DSA:3.30.750.24 446 563 6.1E-20 T 13-10-2018 IPR036513 STAS domain superfamily Y11_12501 50bcff8249cc5022ba82c9eb1198dda3 566 Pfam PF00916 Sulfate permease family 29 414 4.7E-80 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Y11_12501 50bcff8249cc5022ba82c9eb1198dda3 566 SUPERFAMILY SSF52091 456 563 4.71E-13 T 13-10-2018 IPR036513 STAS domain superfamily Y11_12501 50bcff8249cc5022ba82c9eb1198dda3 566 Pfam PF01740 STAS domain 457 558 2.4E-7 T 13-10-2018 IPR002645 STAS domain Y11_12501 50bcff8249cc5022ba82c9eb1198dda3 566 TIGRFAM TIGR00815 sulP: sulfate permease 18 559 1.2E-130 T 13-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 Gene3D G3DSA:3.20.20.60 400 741 2.6E-100 T 13-10-2018 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 Gene3D G3DSA:3.30.450.40 1 163 1.2E-44 T 13-10-2018 IPR029016 GAF-like domain superfamily Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 SMART SM00065 17 164 2.6E-27 T 13-10-2018 IPR003018 GAF domain GO:0005515 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 SUPERFAMILY SSF55781 2 159 6.98E-31 T 13-10-2018 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 176 730 1.2E-131 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 7.6E-25 T 13-10-2018 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 7.6E-25 T 13-10-2018 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 7.6E-25 T 13-10-2018 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 7.6E-25 T 13-10-2018 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 SUPERFAMILY SSF47831 200 309 9.81E-27 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 419 707 7.0E-102 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 Pfam PF01590 GAF domain 18 151 2.0E-15 T 13-10-2018 IPR003018 GAF domain GO:0005515 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 Gene3D G3DSA:1.10.274.10 190 313 3.1E-57 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 Gene3D G3DSA:3.50.30.10 175 399 3.1E-57 T 13-10-2018 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 SUPERFAMILY SSF51621 420 715 4.19E-94 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 SUPERFAMILY SSF52009 293 412 3.14E-26 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 6.4E-16 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Y11_40671 40f36235b122858a679a4bd7a958b4c1 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 4.8E-24 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 27.289 T 13-10-2018 IPR023931 Multidrug resistance protein MdtC Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 Gene3D G3DSA:1.20.1640.10 10 502 8.6E-294 T 13-10-2018 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 Gene3D G3DSA:3.30.2090.10 701 789 8.6E-294 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 SUPERFAMILY SSF82693 136 324 3.92E-22 T 13-10-2018 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 SUPERFAMILY SSF82866 812 1010 2.35E-41 T 13-10-2018 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 Gene3D G3DSA:3.30.70.1320 135 326 8.6E-294 T 13-10-2018 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 Gene3D G3DSA:1.20.1640.10 503 1005 8.6E-294 T 13-10-2018 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 SUPERFAMILY SSF82866 290 491 2.35E-46 T 13-10-2018 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.8E-85 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-85 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.8E-85 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 3.8E-85 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 3.8E-85 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-85 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.8E-85 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.8E-85 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.8E-85 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 SUPERFAMILY SSF82693 555 650 8.72E-18 T 13-10-2018 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 SUPERFAMILY SSF82714 183 265 4.84E-16 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 Gene3D G3DSA:3.30.70.1430 557 649 8.6E-294 T 13-10-2018 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 SUPERFAMILY SSF82693 40 135 4.36E-23 T 13-10-2018 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 Gene3D G3DSA:3.30.70.1440 650 847 8.6E-294 T 13-10-2018 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 Gene3D G3DSA:3.30.2090.10 179 269 8.6E-294 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 SUPERFAMILY SSF82693 665 832 8.11E-6 T 13-10-2018 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 Gene3D G3DSA:3.30.70.1430 40 797 8.6E-294 T 13-10-2018 Y11_43311 f38d7513f57907823cc451a63ba78ca0 1024 SUPERFAMILY SSF82714 703 785 5.75E-16 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_23621 8899f224f0031d4accf5f7a79d178d7f 506 PIRSF PIRSF001892 15 502 1.2E-165 T 13-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 Y11_23621 8899f224f0031d4accf5f7a79d178d7f 506 Pfam PF02321 Outer membrane efflux protein 304 493 8.2E-21 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Y11_23621 8899f224f0031d4accf5f7a79d178d7f 506 Pfam PF02321 Outer membrane efflux protein 85 278 5.1E-28 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Y11_23621 8899f224f0031d4accf5f7a79d178d7f 506 SUPERFAMILY SSF56954 13 495 2.49E-73 T 13-10-2018 Y11_23621 8899f224f0031d4accf5f7a79d178d7f 506 Gene3D G3DSA:1.20.1600.10 62 501 4.5E-72 T 13-10-2018 Y11_07591 73c66ce6ad81de17f10f9db4bdeb71d7 253 Gene3D G3DSA:3.40.50.720 1 253 1.7E-82 T 13-10-2018 Y11_07591 73c66ce6ad81de17f10f9db4bdeb71d7 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 5.1E-58 T 13-10-2018 Y11_07591 73c66ce6ad81de17f10f9db4bdeb71d7 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 6.2E-136 T 13-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 Y11_07591 73c66ce6ad81de17f10f9db4bdeb71d7 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Y11_07591 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.8E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_07591 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 4.8E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_07591 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.8E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_07591 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.8E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_07591 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.8E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_07591 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.8E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_07591 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 8.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_07591 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_07591 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_07591 73c66ce6ad81de17f10f9db4bdeb71d7 253 SUPERFAMILY SSF51735 9 252 1.72E-77 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_01111 00a00c66c4f316a9630adccb5aa4309f 205 Gene3D G3DSA:1.10.357.10 15 204 5.6E-27 T 13-10-2018 Y11_01111 00a00c66c4f316a9630adccb5aa4309f 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 60 2.2E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Y11_01111 00a00c66c4f316a9630adccb5aa4309f 205 SUPERFAMILY SSF48498 100 198 7.53E-16 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Y11_01111 00a00c66c4f316a9630adccb5aa4309f 205 SUPERFAMILY SSF46689 13 79 1.13E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_01111 00a00c66c4f316a9630adccb5aa4309f 205 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 100 199 5.9E-8 T 13-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal Y11_16381 2f8cc58fe516e423cc129fc4aae49eed 327 Gene3D G3DSA:3.40.50.2300 130 267 3.8E-92 T 13-10-2018 Y11_16381 2f8cc58fe516e423cc129fc4aae49eed 327 SUPERFAMILY SSF53822 29 325 1.22E-64 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_16381 2f8cc58fe516e423cc129fc4aae49eed 327 Pfam PF13407 Periplasmic binding protein domain 37 288 5.2E-52 T 13-10-2018 IPR025997 Periplasmic binding protein Y11_16381 2f8cc58fe516e423cc129fc4aae49eed 327 Gene3D G3DSA:3.40.50.2300 41 300 3.8E-92 T 13-10-2018 Y11_40791 a753ad899162417c850747683c93e929 441 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 440 9.2E-202 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Y11_40791 a753ad899162417c850747683c93e929 441 Pfam PF00583 Acetyltransferase (GNAT) family 335 412 2.6E-7 T 13-10-2018 IPR000182 GNAT domain Y11_40791 a753ad899162417c850747683c93e929 441 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 240.192 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Y11_40791 a753ad899162417c850747683c93e929 441 Pfam PF00696 Amino acid kinase family 25 266 3.5E-32 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Y11_40791 a753ad899162417c850747683c93e929 441 Gene3D G3DSA:3.40.1160.10 7 292 4.8E-86 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Y11_40791 a753ad899162417c850747683c93e929 441 SUPERFAMILY SSF53633 4 290 1.95E-70 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Y11_40791 a753ad899162417c850747683c93e929 441 SUPERFAMILY SSF55729 236 416 5.4E-19 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_40791 a753ad899162417c850747683c93e929 441 PIRSF PIRSF000423 1 441 1.5E-211 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Y11_40791 a753ad899162417c850747683c93e929 441 Gene3D G3DSA:3.40.630.30 293 441 1.5E-38 T 13-10-2018 Y11_30741 502886d4e7a28626bab79992dd1a339a 511 SUPERFAMILY SSF48557 4 509 6.75E-191 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 Y11_30741 502886d4e7a28626bab79992dd1a339a 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 4 505 44.199 T 13-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Y11_30741 502886d4e7a28626bab79992dd1a339a 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 508 3.2E-219 T 13-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Y11_30741 502886d4e7a28626bab79992dd1a339a 511 Gene3D G3DSA:1.20.200.10 199 510 6.6E-124 T 13-10-2018 Y11_30741 502886d4e7a28626bab79992dd1a339a 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 140 156 - T 13-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 Y11_30741 502886d4e7a28626bab79992dd1a339a 511 Gene3D G3DSA:1.10.275.10 3 198 1.7E-70 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal Y11_30741 502886d4e7a28626bab79992dd1a339a 511 Pfam PF00221 Aromatic amino acid lyase 12 469 1.0E-184 T 13-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 Y11_25281 2798d0ce717e59dcd2d7c976705365da 310 SUPERFAMILY SSF56672 36 239 1.19E-6 T 13-10-2018 Y11_25281 2798d0ce717e59dcd2d7c976705365da 310 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 111 129 3.5E-12 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Y11_25281 2798d0ce717e59dcd2d7c976705365da 310 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 242 248 3.5E-12 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Y11_25281 2798d0ce717e59dcd2d7c976705365da 310 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 95 109 3.5E-12 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Y11_25281 2798d0ce717e59dcd2d7c976705365da 310 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 65 77 3.5E-12 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Y11_25281 2798d0ce717e59dcd2d7c976705365da 310 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 192 203 3.5E-12 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Y11_25281 2798d0ce717e59dcd2d7c976705365da 310 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 51 64 3.5E-12 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Y11_25281 2798d0ce717e59dcd2d7c976705365da 310 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 59 245 5.6E-8 T 13-10-2018 IPR000477 Reverse transcriptase domain Y11_13371 2798d0ce717e59dcd2d7c976705365da 310 SUPERFAMILY SSF56672 36 239 1.19E-6 T 13-10-2018 Y11_13371 2798d0ce717e59dcd2d7c976705365da 310 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 111 129 3.5E-12 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Y11_13371 2798d0ce717e59dcd2d7c976705365da 310 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 242 248 3.5E-12 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Y11_13371 2798d0ce717e59dcd2d7c976705365da 310 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 95 109 3.5E-12 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Y11_13371 2798d0ce717e59dcd2d7c976705365da 310 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 65 77 3.5E-12 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Y11_13371 2798d0ce717e59dcd2d7c976705365da 310 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 192 203 3.5E-12 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Y11_13371 2798d0ce717e59dcd2d7c976705365da 310 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 51 64 3.5E-12 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Y11_13371 2798d0ce717e59dcd2d7c976705365da 310 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 59 245 5.6E-8 T 13-10-2018 IPR000477 Reverse transcriptase domain Y11_18231 a1e2865d303a88f4a5205e43aa2f00cb 231 Gene3D G3DSA:1.10.3720.10 2 225 6.8E-65 T 13-10-2018 IPR035906 MetI-like superfamily Y11_18231 a1e2865d303a88f4a5205e43aa2f00cb 231 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 220 5.1E-76 T 13-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 Y11_18231 a1e2865d303a88f4a5205e43aa2f00cb 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 227 2.0E-24 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_18231 a1e2865d303a88f4a5205e43aa2f00cb 231 SUPERFAMILY SSF161098 5 219 2.75E-52 T 13-10-2018 IPR035906 MetI-like superfamily Y11_41391 6b91fddb4baa945e334b41a4bb5bed3b 300 Gene3D G3DSA:1.10.10.10 1 87 8.8E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_41391 6b91fddb4baa945e334b41a4bb5bed3b 300 SUPERFAMILY SSF53850 91 293 5.79E-42 T 13-10-2018 Y11_41391 6b91fddb4baa945e334b41a4bb5bed3b 300 Gene3D G3DSA:3.40.190.10 92 290 6.0E-67 T 13-10-2018 Y11_41391 6b91fddb4baa945e334b41a4bb5bed3b 300 Gene3D G3DSA:3.40.190.10 164 264 6.0E-67 T 13-10-2018 Y11_41391 6b91fddb4baa945e334b41a4bb5bed3b 300 SUPERFAMILY SSF46785 5 85 1.19E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_41391 6b91fddb4baa945e334b41a4bb5bed3b 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.2E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_41391 6b91fddb4baa945e334b41a4bb5bed3b 300 Pfam PF03466 LysR substrate binding domain 91 293 6.8E-41 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_39531 a4ca70c521c7c1db7d9610e94e26d425 265 PIRSF PIRSF000388 1 265 6.0E-98 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Y11_39531 a4ca70c521c7c1db7d9610e94e26d425 265 SUPERFAMILY SSF51621 4 264 2.11E-103 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Y11_39531 a4ca70c521c7c1db7d9610e94e26d425 265 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 264 41.853 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Y11_39531 a4ca70c521c7c1db7d9610e94e26d425 265 Gene3D G3DSA:3.20.20.60 1 264 2.8E-104 T 13-10-2018 Y11_39531 a4ca70c521c7c1db7d9610e94e26d425 265 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 265 1.6E-117 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Y11_39531 a4ca70c521c7c1db7d9610e94e26d425 265 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 259 3.6E-105 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Y11_22271 8bf10e8117867436c1ebe75f4227d578 547 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 75 323 6.5E-31 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Y11_22271 8bf10e8117867436c1ebe75f4227d578 547 Pfam PF05683 Fumarase C-terminus 332 537 1.3E-93 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Y11_22271 8bf10e8117867436c1ebe75f4227d578 547 SUPERFAMILY SSF117457 361 536 3.92E-62 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Y11_22271 8bf10e8117867436c1ebe75f4227d578 547 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 1.3E-62 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Y11_22271 8bf10e8117867436c1ebe75f4227d578 547 Gene3D G3DSA:3.20.130.10 347 537 1.3E-58 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Y11_22271 8bf10e8117867436c1ebe75f4227d578 547 Pfam PF05681 Fumarate hydratase (Fumerase) 51 325 6.8E-83 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Y11_22271 8bf10e8117867436c1ebe75f4227d578 547 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Y11_22271 8bf10e8117867436c1ebe75f4227d578 547 PIRSF PIRSF001394 30 547 5.9E-230 T 13-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 Y11_30001 05e5d16d45ad2d27bac0606ebbbed6b7 454 Gene3D G3DSA:3.30.1360.120 1 121 5.1E-38 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Y11_30001 05e5d16d45ad2d27bac0606ebbbed6b7 454 Pfam PF12631 MnmE helical domain 123 451 8.1E-61 T 13-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 Y11_30001 05e5d16d45ad2d27bac0606ebbbed6b7 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 6.7E-23 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Y11_30001 05e5d16d45ad2d27bac0606ebbbed6b7 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 1.5E-100 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Y11_30001 05e5d16d45ad2d27bac0606ebbbed6b7 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.203 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Y11_30001 05e5d16d45ad2d27bac0606ebbbed6b7 454 SUPERFAMILY SSF116878 121 454 2.35E-51 T 13-10-2018 Y11_30001 05e5d16d45ad2d27bac0606ebbbed6b7 454 Gene3D G3DSA:1.20.120.430 122 454 1.4E-103 T 13-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 Y11_30001 05e5d16d45ad2d27bac0606ebbbed6b7 454 Pfam PF01926 50S ribosome-binding GTPase 218 307 1.6E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_30001 05e5d16d45ad2d27bac0606ebbbed6b7 454 SUPERFAMILY SSF52540 72 372 3.98E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_30001 05e5d16d45ad2d27bac0606ebbbed6b7 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 3.5E-34 T 13-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 Y11_30001 05e5d16d45ad2d27bac0606ebbbed6b7 454 Gene3D G3DSA:3.40.50.300 217 382 1.4E-103 T 13-10-2018 Y11_38671 eb4e8145a2e3eda94ed4c6b3474212b3 968 Pfam PF00176 SNF2 family N-terminal domain 174 441 8.9E-20 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Y11_38671 eb4e8145a2e3eda94ed4c6b3474212b3 968 SMART SM00490 517 601 4.9E-15 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_38671 eb4e8145a2e3eda94ed4c6b3474212b3 968 Gene3D G3DSA:3.40.50.10810 150 428 7.8E-109 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Y11_38671 eb4e8145a2e3eda94ed4c6b3474212b3 968 SUPERFAMILY SSF52540 125 378 5.2E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_38671 eb4e8145a2e3eda94ed4c6b3474212b3 968 Gene3D G3DSA:3.30.360.80 713 786 4.1E-32 T 13-10-2018 Y11_38671 eb4e8145a2e3eda94ed4c6b3474212b3 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 28.999 T 13-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 Y11_38671 eb4e8145a2e3eda94ed4c6b3474212b3 968 Gene3D G3DSA:3.40.50.300 429 633 1.9E-47 T 13-10-2018 Y11_38671 eb4e8145a2e3eda94ed4c6b3474212b3 968 Gene3D G3DSA:2.30.30.930 55 114 5.3E-30 T 13-10-2018 Y11_38671 eb4e8145a2e3eda94ed4c6b3474212b3 968 Pfam PF00271 Helicase conserved C-terminal domain 492 601 4.0E-14 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_38671 eb4e8145a2e3eda94ed4c6b3474212b3 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 7.3E-155 T 13-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 Y11_38671 eb4e8145a2e3eda94ed4c6b3474212b3 968 SMART SM00487 150 342 5.4E-21 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Y11_38671 eb4e8145a2e3eda94ed4c6b3474212b3 968 SUPERFAMILY SSF52540 273 643 1.95E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_38671 eb4e8145a2e3eda94ed4c6b3474212b3 968 Gene3D G3DSA:2.30.30.140 1 53 1.7E-23 T 13-10-2018 Y11_p0581 b6f6e70d764dd3359c37a7de0498f3a0 210 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 1 159 4.1E-61 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Y11_p0581 b6f6e70d764dd3359c37a7de0498f3a0 210 Pfam PF01514 Secretory protein of YscJ/FliF family 5 152 1.2E-19 T 13-10-2018 IPR006182 Secretory protein YscJ/FliF Y11_p0581 b6f6e70d764dd3359c37a7de0498f3a0 210 Gene3D G3DSA:3.30.70.1530 1 56 4.7E-19 T 13-10-2018 Y11_p0581 b6f6e70d764dd3359c37a7de0498f3a0 210 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 82 95 2.0E-25 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Y11_p0581 b6f6e70d764dd3359c37a7de0498f3a0 210 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 131 143 2.0E-25 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Y11_p0581 b6f6e70d764dd3359c37a7de0498f3a0 210 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 62 77 2.0E-25 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Y11_p0581 b6f6e70d764dd3359c37a7de0498f3a0 210 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 42 55 2.0E-25 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Y11_p0581 b6f6e70d764dd3359c37a7de0498f3a0 210 Gene3D G3DSA:3.30.300.30 58 165 3.4E-38 T 13-10-2018 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 Pfam PF00702 haloacid dehalogenase-like hydrolase 374 661 2.8E-19 T 13-10-2018 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 SUPERFAMILY SSF81660 347 551 2.68E-40 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 SMART SM00831 51 124 5.5E-5 T 13-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 860 881 2.5E-84 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 308 327 2.5E-84 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 775 791 2.5E-84 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 755 768 2.5E-84 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 705 720 2.5E-84 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 810 831 2.5E-84 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 291 307 2.5E-84 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 412 425 2.5E-84 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 723 734 2.5E-84 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 SUPERFAMILY SSF56784 536 691 3.07E-37 T 13-10-2018 IPR036412 HAD-like superfamily Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 131 395 6.3E-34 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 618 736 4.3E-29 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 Gene3D G3DSA:2.70.150.10 131 257 3.2E-32 T 13-10-2018 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 380 386 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 Pfam PF00122 E1-E2 ATPase 160 358 9.6E-44 T 13-10-2018 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 Gene3D G3DSA:1.20.1110.10 686 810 8.9E-10 T 13-10-2018 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 Gene3D G3DSA:3.40.1110.10 391 558 5.2E-57 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 Gene3D G3DSA:3.40.50.1000 594 685 4.0E-23 T 13-10-2018 IPR023214 HAD superfamily Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 Gene3D G3DSA:1.20.1110.10 258 390 5.2E-22 T 13-10-2018 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 SUPERFAMILY SSF81653 175 276 6.8E-26 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 Pfam PF00690 Cation transporter/ATPase, N-terminus 57 119 3.2E-14 T 13-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 47 906 0.0 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_26671 d64adf9a3decc1bbb9eb9a4aec8f343b 906 SUPERFAMILY SSF81665 58 904 1.31E-101 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Y11_06801 793ffaef678cca3bafa9e53e48e3bb7b 259 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 2.8E-30 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Y11_06801 793ffaef678cca3bafa9e53e48e3bb7b 259 SUPERFAMILY SSF51658 1 258 9.67E-83 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily Y11_06801 793ffaef678cca3bafa9e53e48e3bb7b 259 Gene3D G3DSA:3.20.20.150 1 259 7.1E-77 T 13-10-2018 Y11_06801 793ffaef678cca3bafa9e53e48e3bb7b 259 PIRSF PIRSF006241 1 259 6.2E-88 T 13-10-2018 IPR026040 Hydroxypyruvate isomerase-like Y11_36561 dead036fc3a26c259f7876fa50adbec6 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-17 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36561 dead036fc3a26c259f7876fa50adbec6 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 13-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_36561 dead036fc3a26c259f7876fa50adbec6 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.818 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36561 dead036fc3a26c259f7876fa50adbec6 85 Pfam PF01016 Ribosomal L27 protein 2 82 3.4E-38 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36561 dead036fc3a26c259f7876fa50adbec6 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 3.1E-42 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36561 dead036fc3a26c259f7876fa50adbec6 85 SUPERFAMILY SSF110324 2 79 1.05E-33 T 13-10-2018 Y11_36561 dead036fc3a26c259f7876fa50adbec6 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.6E-38 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36561 dead036fc3a26c259f7876fa50adbec6 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.6E-38 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36561 dead036fc3a26c259f7876fa50adbec6 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.6E-38 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36561 dead036fc3a26c259f7876fa50adbec6 85 Gene3D G3DSA:2.40.50.100 21 85 5.7E-30 T 13-10-2018 Y11_37621 4028af31cfafca1713b9d30161ce6aab 521 Gene3D G3DSA:3.40.50.300 8 237 2.2E-57 T 13-10-2018 Y11_37621 4028af31cfafca1713b9d30161ce6aab 521 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_37621 4028af31cfafca1713b9d30161ce6aab 521 SUPERFAMILY SSF52540 282 484 3.64E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_37621 4028af31cfafca1713b9d30161ce6aab 521 Gene3D G3DSA:3.40.50.300 280 501 1.9E-40 T 13-10-2018 Y11_37621 4028af31cfafca1713b9d30161ce6aab 521 SMART SM00382 291 483 5.5E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_37621 4028af31cfafca1713b9d30161ce6aab 521 SMART SM00382 36 257 2.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_37621 4028af31cfafca1713b9d30161ce6aab 521 Pfam PF00005 ABC transporter 27 169 1.3E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_37621 4028af31cfafca1713b9d30161ce6aab 521 SUPERFAMILY SSF52540 10 227 8.2E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_37621 4028af31cfafca1713b9d30161ce6aab 521 Pfam PF00005 ABC transporter 284 434 1.9E-17 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_26251 edce28878ed019977c239f9cc6479323 1486 SUPERFAMILY SSF56235 12 429 1.39E-150 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_26251 edce28878ed019977c239f9cc6479323 1486 Gene3D G3DSA:3.20.20.70 430 792 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_26251 edce28878ed019977c239f9cc6479323 1486 Gene3D G3DSA:3.60.20.10 12 545 0.0 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_26251 edce28878ed019977c239f9cc6479323 1486 SUPERFAMILY SSF51395 434 1188 1.18E-251 T 13-10-2018 Y11_26251 edce28878ed019977c239f9cc6479323 1486 Pfam PF01645 Conserved region in glutamate synthase 793 1156 1.8E-157 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Y11_26251 edce28878ed019977c239f9cc6479323 1486 Pfam PF00310 Glutamine amidotransferases class-II 12 425 2.5E-177 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Y11_26251 edce28878ed019977c239f9cc6479323 1486 Gene3D G3DSA:2.160.20.60 1196 1468 1.1E-103 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Y11_26251 edce28878ed019977c239f9cc6479323 1486 SUPERFAMILY SSF69336 1211 1465 1.96E-89 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Y11_26251 edce28878ed019977c239f9cc6479323 1486 Pfam PF01493 GXGXG motif 1236 1419 2.9E-76 T 13-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Y11_26251 edce28878ed019977c239f9cc6479323 1486 Gene3D G3DSA:3.20.20.70 483 1169 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_26251 edce28878ed019977c239f9cc6479323 1486 Pfam PF04898 Glutamate synthase central domain 457 737 1.3E-103 T 13-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 Y11_27261 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Y11_27261 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Y11_27261 b35aa6e9977e10a02a1243efe8e50ad3 98 SUPERFAMILY SSF46689 4 98 5.38E-27 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_27261 b35aa6e9977e10a02a1243efe8e50ad3 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-35 T 13-10-2018 Y11_27261 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 5.1E-34 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Y11_27261 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 5.1E-34 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Y11_27261 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 5.1E-34 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Y11_27261 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 5.1E-34 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Y11_27261 b35aa6e9977e10a02a1243efe8e50ad3 98 PIRSF PIRSF002097 1 98 8.9E-47 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Y11_27261 b35aa6e9977e10a02a1243efe8e50ad3 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.512 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Y11_27261 b35aa6e9977e10a02a1243efe8e50ad3 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.8E-14 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Y11_30241 8f8ca4a5349e7412d2027be69055ccb0 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 2.8E-61 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Y11_30241 8f8ca4a5349e7412d2027be69055ccb0 326 SUPERFAMILY SSF52283 1 133 7.56E-30 T 13-10-2018 Y11_30241 8f8ca4a5349e7412d2027be69055ccb0 326 Gene3D G3DSA:3.40.50.720 10 311 3.1E-108 T 13-10-2018 Y11_30241 8f8ca4a5349e7412d2027be69055ccb0 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 2.8E-29 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Y11_30241 8f8ca4a5349e7412d2027be69055ccb0 326 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 176 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Y11_30241 8f8ca4a5349e7412d2027be69055ccb0 326 SUPERFAMILY SSF51735 100 288 1.41E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_30241 8f8ca4a5349e7412d2027be69055ccb0 326 Gene3D G3DSA:3.40.50.720 98 286 3.1E-108 T 13-10-2018 Y11_30241 8f8ca4a5349e7412d2027be69055ccb0 326 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 324 67.796 T 13-10-2018 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 Y11_30241 8f8ca4a5349e7412d2027be69055ccb0 326 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Y11_24991 1e2164dd2ab63bb156df7bf7e465cff5 950 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 27 945 19.703 T 13-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 Y11_24991 1e2164dd2ab63bb156df7bf7e465cff5 950 Gene3D G3DSA:3.30.460.10 111 284 9.5E-68 T 13-10-2018 Y11_24991 1e2164dd2ab63bb156df7bf7e465cff5 950 Gene3D G3DSA:1.20.120.1510 450 561 5.7E-31 T 13-10-2018 Y11_24991 1e2164dd2ab63bb156df7bf7e465cff5 950 SUPERFAMILY SSF81593 287 436 1.57E-43 T 13-10-2018 Y11_24991 1e2164dd2ab63bb156df7bf7e465cff5 950 SUPERFAMILY SSF81301 17 286 1.06E-91 T 13-10-2018 Y11_24991 1e2164dd2ab63bb156df7bf7e465cff5 950 Gene3D G3DSA:1.20.120.330 812 946 8.0E-48 T 13-10-2018 Y11_24991 1e2164dd2ab63bb156df7bf7e465cff5 950 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 553 805 1.9E-98 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Y11_24991 1e2164dd2ab63bb156df7bf7e465cff5 950 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 276 4.6E-96 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Y11_24991 1e2164dd2ab63bb156df7bf7e465cff5 950 Gene3D G3DSA:1.20.120.330 285 440 4.9E-57 T 13-10-2018 Y11_24991 1e2164dd2ab63bb156df7bf7e465cff5 950 SUPERFAMILY SSF81593 818 943 2.75E-33 T 13-10-2018 Y11_24991 1e2164dd2ab63bb156df7bf7e465cff5 950 Pfam PF08335 GlnD PII-uridylyltransferase 825 920 1.8E-10 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Y11_24991 1e2164dd2ab63bb156df7bf7e465cff5 950 Pfam PF08335 GlnD PII-uridylyltransferase 297 436 2.6E-47 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Y11_24991 1e2164dd2ab63bb156df7bf7e465cff5 950 Gene3D G3DSA:3.30.460.100 562 811 2.8E-98 T 13-10-2018 Y11_24991 1e2164dd2ab63bb156df7bf7e465cff5 950 Gene3D G3DSA:1.10.4050.10 1 109 6.3E-30 T 13-10-2018 Y11_24991 1e2164dd2ab63bb156df7bf7e465cff5 950 SUPERFAMILY SSF81301 525 815 1.57E-88 T 13-10-2018 Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 479 3.8E-24 T 13-10-2018 Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 3.8E-24 T 13-10-2018 Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 541 3.8E-24 T 13-10-2018 Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 557 3.8E-24 T 13-10-2018 Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.8E-24 T 13-10-2018 Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 Pfam PF00122 E1-E2 ATPase 118 288 2.0E-31 T 13-10-2018 Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 SUPERFAMILY SSF56784 299 565 1.55E-37 T 13-10-2018 IPR036412 HAD-like superfamily Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 SUPERFAMILY SSF81653 115 207 1.57E-20 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 3 683 0.0 T 13-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 SUPERFAMILY SSF81665 33 594 3.79E-10 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 536 9.8E-36 T 13-10-2018 Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 Gene3D G3DSA:3.40.1110.10 325 453 2.8E-55 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 Gene3D G3DSA:2.70.150.20 106 212 4.3E-26 T 13-10-2018 Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 378 610 5.4E-49 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 347 7.4E-34 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 313 319 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Y11_18811 4b44bd84bb916148acaa36f61ec624e8 688 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 686 41.108 T 13-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 Y11_02361 f5a9e7fe34363b50c9d2f37e3c95088b 173 SUPERFAMILY SSF52283 10 143 3.83E-31 T 13-10-2018 Y11_02361 f5a9e7fe34363b50c9d2f37e3c95088b 173 Gene3D G3DSA:3.40.50.720 108 160 1.3E-42 T 13-10-2018 Y11_02361 f5a9e7fe34363b50c9d2f37e3c95088b 173 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 115 4.4E-19 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Y11_02361 f5a9e7fe34363b50c9d2f37e3c95088b 173 Gene3D G3DSA:3.40.50.720 20 107 1.3E-42 T 13-10-2018 Y11_04881 029826dc1fcdedb86a13a8fccbc533af 244 Pfam PF03472 Autoinducer binding domain 13 157 9.8E-29 T 13-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain Y11_04881 029826dc1fcdedb86a13a8fccbc533af 244 ProSitePatterns PS00622 LuxR-type HTH domain signature. 195 222 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_04881 029826dc1fcdedb86a13a8fccbc533af 244 Gene3D G3DSA:3.30.450.80 1 178 1.5E-77 T 13-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily Y11_04881 029826dc1fcdedb86a13a8fccbc533af 244 Gene3D G3DSA:1.10.10.10 179 242 3.0E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_04881 029826dc1fcdedb86a13a8fccbc533af 244 SMART SM00421 178 235 8.7E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_04881 029826dc1fcdedb86a13a8fccbc533af 244 SUPERFAMILY SSF46894 177 241 6.12E-15 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_04881 029826dc1fcdedb86a13a8fccbc533af 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 211 1.6E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_04881 029826dc1fcdedb86a13a8fccbc533af 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 195 1.6E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_04881 029826dc1fcdedb86a13a8fccbc533af 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 211 223 1.6E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_04881 029826dc1fcdedb86a13a8fccbc533af 244 Pfam PF00196 Bacterial regulatory proteins, luxR family 180 233 9.5E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_04881 029826dc1fcdedb86a13a8fccbc533af 244 SUPERFAMILY SSF75516 2 162 3.01E-37 T 13-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily Y11_18651 9546af455c09e036b829ecf14ece944c 426 Gene3D G3DSA:1.10.580.10 56 409 2.8E-152 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Y11_18651 9546af455c09e036b829ecf14ece944c 426 SUPERFAMILY SSF48256 3 421 6.15E-168 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Y11_18651 9546af455c09e036b829ecf14ece944c 426 PIRSF PIRSF001369 37 426 1.6E-173 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type Y11_18651 9546af455c09e036b829ecf14ece944c 426 Gene3D G3DSA:2.20.28.60 1 49 9.7E-19 T 13-10-2018 Y11_18651 9546af455c09e036b829ecf14ece944c 426 PRINTS PR00143 Citrate synthase signature 295 315 7.1E-56 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Y11_18651 9546af455c09e036b829ecf14ece944c 426 PRINTS PR00143 Citrate synthase signature 378 392 7.1E-56 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Y11_18651 9546af455c09e036b829ecf14ece944c 426 PRINTS PR00143 Citrate synthase signature 218 233 7.1E-56 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Y11_18651 9546af455c09e036b829ecf14ece944c 426 PRINTS PR00143 Citrate synthase signature 240 268 7.1E-56 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Y11_18651 9546af455c09e036b829ecf14ece944c 426 PRINTS PR00143 Citrate synthase signature 164 177 7.1E-56 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Y11_18651 9546af455c09e036b829ecf14ece944c 426 PRINTS PR00143 Citrate synthase signature 358 374 7.1E-56 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Y11_18651 9546af455c09e036b829ecf14ece944c 426 ProSitePatterns PS00480 Citrate synthase signature. 302 314 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Y11_18651 9546af455c09e036b829ecf14ece944c 426 Pfam PF00285 Citrate synthase, C-terminal domain 45 409 6.7E-133 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Y11_18651 9546af455c09e036b829ecf14ece944c 426 Gene3D G3DSA:1.10.230.10 267 375 2.8E-152 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Y11_18651 9546af455c09e036b829ecf14ece944c 426 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 420 8.5E-237 T 13-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 Y11_16011 691f03a79ae7c081d5679112ce599465 264 Gene3D G3DSA:3.40.50.1400 3 255 3.9E-97 T 13-10-2018 Y11_16011 691f03a79ae7c081d5679112ce599465 264 PIRSF PIRSF033579 1 264 2.1E-99 T 13-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 Y11_16011 691f03a79ae7c081d5679112ce599465 264 Gene3D G3DSA:3.40.50.1400 114 236 3.9E-97 T 13-10-2018 Y11_16011 691f03a79ae7c081d5679112ce599465 264 SUPERFAMILY SSF53800 2 256 2.29E-81 T 13-10-2018 Y11_16011 691f03a79ae7c081d5679112ce599465 264 Pfam PF06180 Cobalt chelatase (CbiK) 3 256 5.5E-95 T 13-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 Y11_40841 47b8c6ae5dbf3e7e7ff20e2836078616 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 8.6E-229 T 13-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Y11_40841 47b8c6ae5dbf3e7e7ff20e2836078616 401 Gene3D G3DSA:3.40.640.10 34 292 1.1E-147 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_40841 47b8c6ae5dbf3e7e7ff20e2836078616 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Y11_40841 47b8c6ae5dbf3e7e7ff20e2836078616 401 SUPERFAMILY SSF53383 5 397 5.45E-110 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_40841 47b8c6ae5dbf3e7e7ff20e2836078616 401 Gene3D G3DSA:3.90.1150.10 21 389 1.1E-147 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_40841 47b8c6ae5dbf3e7e7ff20e2836078616 401 Pfam PF00266 Aminotransferase class-V 21 388 2.3E-138 T 13-10-2018 IPR000192 Aminotransferase class V domain Y11_p0261 8f874c2d9d0fb76e3ed4635cffcf6120 138 Gene3D G3DSA:1.10.10.60 94 136 4.5E-6 T 13-10-2018 Y11_p0261 8f874c2d9d0fb76e3ed4635cffcf6120 138 Gene3D G3DSA:3.40.50.1390 1 79 7.8E-21 T 13-10-2018 Y11_p0261 8f874c2d9d0fb76e3ed4635cffcf6120 138 Pfam PF02796 Helix-turn-helix domain of resolvase 92 135 1.3E-9 T 13-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 Y11_p0261 8f874c2d9d0fb76e3ed4635cffcf6120 138 SUPERFAMILY SSF53041 1 89 1.7E-22 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Y11_p0261 8f874c2d9d0fb76e3ed4635cffcf6120 138 SMART SM00857 1 90 2.6E-4 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Y11_p0261 8f874c2d9d0fb76e3ed4635cffcf6120 138 SUPERFAMILY SSF46689 92 132 8.51E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_p0261 8f874c2d9d0fb76e3ed4635cffcf6120 138 Pfam PF00239 Resolvase, N terminal domain 1 89 2.6E-22 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Y11_p0261 8f874c2d9d0fb76e3ed4635cffcf6120 138 ProSitePatterns PS00398 Site-specific recombinases signature 2. 8 20 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Y11_10141 44245418dc08bdf5c8d980304ecdd9b2 635 SMART SM00382 423 607 6.3E-20 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_10141 44245418dc08bdf5c8d980304ecdd9b2 635 ProSitePatterns PS00211 ABC transporters family signature. 535 549 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_10141 44245418dc08bdf5c8d980304ecdd9b2 635 Pfam PF00664 ABC transporter transmembrane region 85 351 3.2E-46 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Y11_10141 44245418dc08bdf5c8d980304ecdd9b2 635 SUPERFAMILY SSF52540 392 633 2.41E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_10141 44245418dc08bdf5c8d980304ecdd9b2 635 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 1 635 0.0 T 13-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 Y11_10141 44245418dc08bdf5c8d980304ecdd9b2 635 Pfam PF00005 ABC transporter 415 563 1.9E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_10141 44245418dc08bdf5c8d980304ecdd9b2 635 Gene3D G3DSA:1.20.1560.10 69 382 1.3E-72 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_10141 44245418dc08bdf5c8d980304ecdd9b2 635 Gene3D G3DSA:3.40.50.300 389 635 1.3E-87 T 13-10-2018 Y11_10141 44245418dc08bdf5c8d980304ecdd9b2 635 SUPERFAMILY SSF90123 70 382 3.01E-66 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_08721 be68362f9d5cddc7f1e9cd9ac5e59aba 75 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 2.8E-36 T 13-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 Y11_08721 be68362f9d5cddc7f1e9cd9ac5e59aba 75 Pfam PF06667 Phage shock protein B 4 74 1.0E-34 T 13-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 Y11_28401 8b4eeab93fce8db492094dd71cb08267 300 SUPERFAMILY SSF160240 209 287 1.02E-24 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Y11_28401 8b4eeab93fce8db492094dd71cb08267 300 Gene3D G3DSA:1.20.1510.10 8 206 3.9E-67 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Y11_28401 8b4eeab93fce8db492094dd71cb08267 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 1.0E-24 T 13-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain Y11_28401 8b4eeab93fce8db492094dd71cb08267 300 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 61.673 T 13-10-2018 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 Y11_28401 8b4eeab93fce8db492094dd71cb08267 300 SUPERFAMILY SSF161111 9 207 2.22E-51 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Y11_28401 8b4eeab93fce8db492094dd71cb08267 300 Pfam PF01545 Cation efflux family 16 206 5.5E-45 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Y11_28401 8b4eeab93fce8db492094dd71cb08267 300 Gene3D G3DSA:3.30.70.1350 207 290 8.8E-33 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Y11_28401 8b4eeab93fce8db492094dd71cb08267 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 286 2.5E-73 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Y11_43421 5b9d11b9d76570e74205e0149828c70f 491 TIGRFAM TIGR00400 mgtE: magnesium transporter 64 490 6.4E-77 T 13-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 Y11_43421 5b9d11b9d76570e74205e0149828c70f 491 Gene3D G3DSA:1.10.357.20 317 491 9.3E-48 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Y11_43421 5b9d11b9d76570e74205e0149828c70f 491 Gene3D G3DSA:1.25.60.10 50 173 2.1E-15 T 13-10-2018 IPR038076 MgtE, N-terminal domain superfamily Y11_43421 5b9d11b9d76570e74205e0149828c70f 491 Pfam PF03448 MgtE intracellular N domain 75 175 6.3E-23 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Y11_43421 5b9d11b9d76570e74205e0149828c70f 491 SMART SM00924 75 178 1.7E-31 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Y11_43421 5b9d11b9d76570e74205e0149828c70f 491 Gene3D G3DSA:3.10.580.10 175 301 1.4E-40 T 13-10-2018 Y11_43421 5b9d11b9d76570e74205e0149828c70f 491 SUPERFAMILY SSF158791 63 173 2.62E-22 T 13-10-2018 Y11_43421 5b9d11b9d76570e74205e0149828c70f 491 SUPERFAMILY SSF54631 177 316 2.32E-24 T 13-10-2018 Y11_43421 5b9d11b9d76570e74205e0149828c70f 491 SUPERFAMILY SSF161093 319 490 4.45E-48 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Y11_43421 5b9d11b9d76570e74205e0149828c70f 491 Pfam PF00571 CBS domain 244 296 1.2E-4 T 13-10-2018 IPR000644 CBS domain Y11_43421 5b9d11b9d76570e74205e0149828c70f 491 Pfam PF01769 Divalent cation transporter 362 483 9.1E-24 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Y11_41191 b50486af2f6f0e06db6714b12589584a 713 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 2.2E-183 T 13-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Y11_41191 b50486af2f6f0e06db6714b12589584a 713 Gene3D G3DSA:3.40.50.2300 1 129 4.1E-53 T 13-10-2018 Y11_41191 b50486af2f6f0e06db6714b12589584a 713 Gene3D G3DSA:3.90.1150.10 425 594 1.3E-67 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_41191 b50486af2f6f0e06db6714b12589584a 713 SUPERFAMILY SSF55904 566 708 2.22E-39 T 13-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 Y11_41191 b50486af2f6f0e06db6714b12589584a 713 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 3.3E-26 T 13-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 Y11_41191 b50486af2f6f0e06db6714b12589584a 713 PIRSF PIRSF009393 1 712 9.6E-269 T 13-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 Y11_41191 b50486af2f6f0e06db6714b12589584a 713 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 13-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Y11_41191 b50486af2f6f0e06db6714b12589584a 713 Gene3D G3DSA:3.90.100.10 595 713 9.6E-41 T 13-10-2018 Y11_41191 b50486af2f6f0e06db6714b12589584a 713 Gene3D G3DSA:3.40.640.10 130 424 4.1E-89 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_41191 b50486af2f6f0e06db6714b12589584a 713 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 4.6E-42 T 13-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 Y11_41191 b50486af2f6f0e06db6714b12589584a 713 SUPERFAMILY SSF53383 130 561 2.77E-99 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_32341 3c93cdb6ecf044a970723a956086008e 362 SUPERFAMILY SSF56796 4 357 1.83E-115 T 13-10-2018 Y11_32341 3c93cdb6ecf044a970723a956086008e 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 357 74.522 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Y11_32341 3c93cdb6ecf044a970723a956086008e 362 PIRSF PIRSF001455 11 359 9.6E-107 T 13-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Y11_32341 3c93cdb6ecf044a970723a956086008e 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 1.2E-120 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Y11_32341 3c93cdb6ecf044a970723a956086008e 362 Gene3D G3DSA:1.20.1090.10 173 361 6.9E-65 T 13-10-2018 Y11_32341 3c93cdb6ecf044a970723a956086008e 362 Pfam PF01761 3-dehydroquinate synthase 67 326 9.3E-109 T 13-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Y11_32341 3c93cdb6ecf044a970723a956086008e 362 Gene3D G3DSA:3.40.50.1970 1 172 4.2E-64 T 13-10-2018 Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 13-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 2 381 2.1E-123 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 5.3E-73 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 5.3E-73 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 5.3E-73 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 5.3E-73 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 5.3E-73 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 5.3E-73 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 5.3E-73 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 5.3E-73 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 PIRSF PIRSF001480 1 391 4.9E-111 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 13-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 Gene3D G3DSA:2.60.120.10 6 275 9.8E-146 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 Gene3D G3DSA:2.60.120.10 301 381 9.8E-146 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 SUPERFAMILY SSF51182 1 374 2.16E-105 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 Gene3D G3DSA:1.10.441.10 150 300 9.8E-146 T 13-10-2018 Y11_09971 df87810f4f48ece35fb66c0ec062b70d 391 Pfam PF01238 Phosphomannose isomerase type I 1 356 1.3E-104 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_14201 d1dc66403ca06e1cb5c8aa4d42742772 559 PRINTS PR01009 Flagellar M-ring protein signature 156 170 6.4E-42 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Y11_14201 d1dc66403ca06e1cb5c8aa4d42742772 559 PRINTS PR01009 Flagellar M-ring protein signature 124 142 6.4E-42 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Y11_14201 d1dc66403ca06e1cb5c8aa4d42742772 559 PRINTS PR01009 Flagellar M-ring protein signature 364 388 6.4E-42 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Y11_14201 d1dc66403ca06e1cb5c8aa4d42742772 559 PRINTS PR01009 Flagellar M-ring protein signature 199 217 6.4E-42 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Y11_14201 d1dc66403ca06e1cb5c8aa4d42742772 559 PRINTS PR01009 Flagellar M-ring protein signature 268 286 6.4E-42 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Y11_14201 d1dc66403ca06e1cb5c8aa4d42742772 559 PIRSF PIRSF004862 7 559 2.9E-163 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Y11_14201 d1dc66403ca06e1cb5c8aa4d42742772 559 Pfam PF08345 Flagellar M-ring protein C-terminal 255 436 4.5E-50 T 13-10-2018 IPR013556 Flagellar M-ring C-terminal Y11_14201 d1dc66403ca06e1cb5c8aa4d42742772 559 Pfam PF01514 Secretory protein of YscJ/FliF family 34 223 3.8E-73 T 13-10-2018 IPR006182 Secretory protein YscJ/FliF Y11_14201 d1dc66403ca06e1cb5c8aa4d42742772 559 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 16 558 9.7E-170 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Y11_14201 d1dc66403ca06e1cb5c8aa4d42742772 559 Gene3D G3DSA:3.30.300.30 125 227 1.6E-9 T 13-10-2018 Y11_38571 d445c999e5e99d22fd641fbcd4639228 160 SUPERFAMILY SSF53597 1 160 2.49E-57 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Y11_38571 d445c999e5e99d22fd641fbcd4639228 160 Pfam PF00186 Dihydrofolate reductase 3 159 2.5E-58 T 13-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 Y11_38571 d445c999e5e99d22fd641fbcd4639228 160 PIRSF PIRSF000194 1 160 6.9E-58 T 13-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 Y11_38571 d445c999e5e99d22fd641fbcd4639228 160 Gene3D G3DSA:3.40.430.10 1 160 1.5E-58 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Y11_38571 d445c999e5e99d22fd641fbcd4639228 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.1E-14 T 13-10-2018 Y11_38571 d445c999e5e99d22fd641fbcd4639228 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.1E-14 T 13-10-2018 Y11_38571 d445c999e5e99d22fd641fbcd4639228 160 PRINTS PR00070 Dihydrofolate reductase signature 91 105 1.1E-14 T 13-10-2018 Y11_38571 d445c999e5e99d22fd641fbcd4639228 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.1E-14 T 13-10-2018 Y11_38571 d445c999e5e99d22fd641fbcd4639228 160 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 13-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 Y11_02141 05e22eeefbfff4b8bc6414cca3a716ef 310 SUPERFAMILY SSF53850 96 287 8.38E-30 T 13-10-2018 Y11_02141 05e22eeefbfff4b8bc6414cca3a716ef 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 2.2E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_02141 05e22eeefbfff4b8bc6414cca3a716ef 310 Gene3D G3DSA:3.40.190.10 103 269 5.0E-60 T 13-10-2018 Y11_02141 05e22eeefbfff4b8bc6414cca3a716ef 310 SUPERFAMILY SSF46785 9 89 4.99E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_02141 05e22eeefbfff4b8bc6414cca3a716ef 310 Gene3D G3DSA:1.10.10.10 8 92 3.0E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_02141 05e22eeefbfff4b8bc6414cca3a716ef 310 Pfam PF03466 LysR substrate binding domain 97 249 6.3E-28 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_02141 05e22eeefbfff4b8bc6414cca3a716ef 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 3.4E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_02141 05e22eeefbfff4b8bc6414cca3a716ef 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 3.4E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_02141 05e22eeefbfff4b8bc6414cca3a716ef 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 3.4E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_02141 05e22eeefbfff4b8bc6414cca3a716ef 310 Gene3D G3DSA:3.40.190.10 169 262 5.0E-60 T 13-10-2018 Y11_16981 157194980895397d90aa7b81ce3cebce 92 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 13-10-2018 IPR019812 Hydrogenase assembly chaperone, conserved site Y11_16981 157194980895397d90aa7b81ce3cebce 92 SUPERFAMILY SSF159127 1 87 1.23E-28 T 13-10-2018 IPR037254 HupF/HypC superfamily Y11_16981 157194980895397d90aa7b81ce3cebce 92 Pfam PF01455 HupF/HypC family 1 74 4.8E-27 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Y11_16981 157194980895397d90aa7b81ce3cebce 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 4.3E-22 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Y11_16981 157194980895397d90aa7b81ce3cebce 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 4.3E-22 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Y11_16981 157194980895397d90aa7b81ce3cebce 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 47 63 4.3E-22 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Y11_16981 157194980895397d90aa7b81ce3cebce 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 65 77 4.3E-22 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Y11_16981 157194980895397d90aa7b81ce3cebce 92 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 84 1.6E-26 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Y11_16981 157194980895397d90aa7b81ce3cebce 92 Gene3D G3DSA:2.40.50.970 1 83 1.9E-26 T 13-10-2018 IPR037254 HupF/HypC superfamily Y11_36651 544ff54c51dcb616423a86397b49c547 607 ProSitePatterns PS00674 AAA-protein family signature. 254 272 - T 13-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Y11_36651 544ff54c51dcb616423a86397b49c547 607 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 10 571 36.951 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Y11_36651 544ff54c51dcb616423a86397b49c547 607 Gene3D G3DSA:3.40.50.300 104 283 9.5E-71 T 13-10-2018 Y11_36651 544ff54c51dcb616423a86397b49c547 607 Gene3D G3DSA:1.20.58.760 360 563 1.3E-69 T 13-10-2018 Y11_36651 544ff54c51dcb616423a86397b49c547 607 Pfam PF01434 Peptidase family M41 345 554 8.4E-82 T 13-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Y11_36651 544ff54c51dcb616423a86397b49c547 607 Gene3D G3DSA:2.40.50.920 1 63 2.2E-27 T 13-10-2018 Y11_36651 544ff54c51dcb616423a86397b49c547 607 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 151 283 5.8E-46 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Y11_36651 544ff54c51dcb616423a86397b49c547 607 SUPERFAMILY SSF52540 105 354 2.58E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_36651 544ff54c51dcb616423a86397b49c547 607 SMART SM00382 147 286 1.9E-26 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_36651 544ff54c51dcb616423a86397b49c547 607 SUPERFAMILY SSF140990 365 564 1.27E-72 T 13-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Y11_36651 544ff54c51dcb616423a86397b49c547 607 Gene3D G3DSA:1.10.8.60 285 359 4.9E-28 T 13-10-2018 Y11_36651 544ff54c51dcb616423a86397b49c547 607 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 63 556 9.3E-247 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Y11_11591 e3856fe3260cfc70fd1b7e256a85edd3 228 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 2.4E-34 T 13-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 Y11_11591 e3856fe3260cfc70fd1b7e256a85edd3 228 Gene3D G3DSA:3.30.750.120 1 114 6.8E-42 T 13-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily Y11_11591 e3856fe3260cfc70fd1b7e256a85edd3 228 SUPERFAMILY SSF63848 122 227 5.75E-31 T 13-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 Y11_11591 e3856fe3260cfc70fd1b7e256a85edd3 228 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 124 224 2.0E-30 T 13-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 Y11_11591 e3856fe3260cfc70fd1b7e256a85edd3 228 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 227 8.6E-73 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Y11_11591 e3856fe3260cfc70fd1b7e256a85edd3 228 Gene3D G3DSA:2.160.20.70 119 228 1.7E-28 T 13-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 Y11_11591 e3856fe3260cfc70fd1b7e256a85edd3 228 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 228 28.78 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Y11_21821 cb6b3d47f90c366d0585339c2080bd07 511 Gene3D G3DSA:1.20.1720.10 14 219 4.0E-47 T 13-10-2018 Y11_21821 cb6b3d47f90c366d0585339c2080bd07 511 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 497 5.6E-210 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Y11_21821 cb6b3d47f90c366d0585339c2080bd07 511 SUPERFAMILY SSF103473 8 499 2.49E-73 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_21821 cb6b3d47f90c366d0585339c2080bd07 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 204 222 6.9E-5 T 13-10-2018 Y11_21821 cb6b3d47f90c366d0585339c2080bd07 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 6.9E-5 T 13-10-2018 Y11_21821 cb6b3d47f90c366d0585339c2080bd07 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 6.9E-5 T 13-10-2018 Y11_21821 cb6b3d47f90c366d0585339c2080bd07 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 6.9E-5 T 13-10-2018 Y11_21821 cb6b3d47f90c366d0585339c2080bd07 511 Pfam PF07690 Major Facilitator Superfamily 18 412 4.7E-55 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_11961 8a49cd40a3757d1d40657bc3033ed23c 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 18 52 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Y11_11961 8a49cd40a3757d1d40657bc3033ed23c 269 SMART SM00420 18 70 6.9E-21 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_11961 8a49cd40a3757d1d40657bc3033ed23c 269 SUPERFAMILY SSF100950 88 250 1.76E-33 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_11961 8a49cd40a3757d1d40657bc3033ed23c 269 SMART SM01134 87 248 3.1E-71 T 13-10-2018 Y11_11961 8a49cd40a3757d1d40657bc3033ed23c 269 Gene3D G3DSA:1.10.10.10 4 67 2.6E-9 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_11961 8a49cd40a3757d1d40657bc3033ed23c 269 Pfam PF08220 DeoR-like helix-turn-helix domain 18 72 2.0E-19 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_11961 8a49cd40a3757d1d40657bc3033ed23c 269 SUPERFAMILY SSF46785 16 70 5.33E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_11961 8a49cd40a3757d1d40657bc3033ed23c 269 Pfam PF00455 DeoR C terminal sensor domain 89 247 9.3E-56 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain Y11_32961 8b2fd8a4265bcf8859aa63a35e3fcda4 63 Gene3D G3DSA:1.10.287.310 1 63 8.5E-30 T 13-10-2018 Y11_32961 8b2fd8a4265bcf8859aa63a35e3fcda4 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.366 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32961 8b2fd8a4265bcf8859aa63a35e3fcda4 63 SUPERFAMILY SSF46561 1 61 1.03E-21 T 13-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32961 8b2fd8a4265bcf8859aa63a35e3fcda4 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 3.4E-22 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32961 8b2fd8a4265bcf8859aa63a35e3fcda4 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.3E-22 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_20671 850078f7b9c15020a4bb6cd627a40c90 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.095 T 13-10-2018 IPR007551 Protein of unknown function DUF520 Y11_20671 850078f7b9c15020a4bb6cd627a40c90 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 2.2E-65 T 13-10-2018 IPR007551 Protein of unknown function DUF520 Y11_20671 850078f7b9c15020a4bb6cd627a40c90 163 Gene3D G3DSA:3.30.70.860 98 163 9.4E-32 T 13-10-2018 IPR035571 UPF0234-like, C-terminal Y11_20671 850078f7b9c15020a4bb6cd627a40c90 163 Gene3D G3DSA:3.30.70.990 9 97 3.0E-32 T 13-10-2018 IPR035570 UPF0234, N-terminal Y11_20671 850078f7b9c15020a4bb6cd627a40c90 163 SUPERFAMILY SSF89963 91 163 2.88E-29 T 13-10-2018 IPR036183 YajQ-like superfamily Y11_20671 850078f7b9c15020a4bb6cd627a40c90 163 SUPERFAMILY SSF89963 2 89 9.94E-30 T 13-10-2018 IPR036183 YajQ-like superfamily Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 608 6.6E-35 T 13-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 SMART SM00890 622 679 9.7E-30 T 13-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 SUPERFAMILY SSF52922 255 409 2.57E-42 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 SUPERFAMILY SSF53323 417 668 1.44E-74 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 PIRSF PIRSF000159 1 1177 0.0 T 13-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 Gene3D G3DSA:3.40.50.920 255 415 9.7E-55 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 SUPERFAMILY SSF52518 2 254 4.41E-72 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 SUPERFAMILY SSF54862 665 837 7.95E-23 T 13-10-2018 Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 1.8E-80 T 13-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 Gene3D G3DSA:3.30.70.20 669 791 4.5E-38 T 13-10-2018 Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 350 2.3E-15 T 13-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 Pfam PF10371 Domain of unknown function 627 678 1.2E-23 T 13-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 Gene3D G3DSA:3.40.50.970 1 254 9.6E-106 T 13-10-2018 Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 Gene3D G3DSA:4.10.780.10 633 668 4.9E-7 T 13-10-2018 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1168 0.0 T 13-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 Pfam PF12838 4Fe-4S dicluster domain 689 757 5.1E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 957 1069 1.9E-8 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 Gene3D G3DSA:3.40.920.10 416 624 1.0E-74 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 SUPERFAMILY SSF52518 794 1164 1.95E-117 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 Gene3D G3DSA:3.40.50.970 793 1170 3.5E-151 T 13-10-2018 Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_08871 5da4626f3ed350700d6bd4c2f37c75fc 1177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 Gene3D G3DSA:3.40.50.1980 209 322 1.7E-42 T 13-10-2018 Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 SUPERFAMILY SSF53807 49 321 1.28E-91 T 13-10-2018 Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 Gene3D G3DSA:3.40.50.1980 51 208 7.9E-54 T 13-10-2018 Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 PRINTS PR00691 Adhesin B signature 207 224 1.2E-38 T 13-10-2018 IPR006129 Adhesin B GO:0007155 Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 PRINTS PR00691 Adhesin B signature 278 296 1.2E-38 T 13-10-2018 IPR006129 Adhesin B GO:0007155 Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 PRINTS PR00691 Adhesin B signature 52 73 1.2E-38 T 13-10-2018 IPR006129 Adhesin B GO:0007155 Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 PRINTS PR00691 Adhesin B signature 96 115 1.2E-38 T 13-10-2018 IPR006129 Adhesin B GO:0007155 Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 PRINTS PR00691 Adhesin B signature 77 95 1.2E-38 T 13-10-2018 IPR006129 Adhesin B GO:0007155 Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 PRINTS PR00691 Adhesin B signature 256 273 1.2E-38 T 13-10-2018 IPR006129 Adhesin B GO:0007155 Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 PRINTS PR00691 Adhesin B signature 233 251 1.2E-38 T 13-10-2018 IPR006129 Adhesin B GO:0007155 Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 Pfam PF01297 Zinc-uptake complex component A periplasmic 55 318 3.5E-79 T 13-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 PRINTS PR00690 Adhesin family signature 83 96 5.0E-46 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 PRINTS PR00690 Adhesin family signature 52 70 5.0E-46 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 PRINTS PR00690 Adhesin family signature 207 228 5.0E-46 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 PRINTS PR00690 Adhesin family signature 286 305 5.0E-46 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 PRINTS PR00690 Adhesin family signature 96 113 5.0E-46 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Y11_07731 dd9508fd652f90c1725a249fd2f8befa 322 PRINTS PR00690 Adhesin family signature 260 278 5.0E-46 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Y11_23471 cd5b12387abd064cbdbd1d027265a1f5 358 SUPERFAMILY SSF53955 155 357 6.48E-37 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Y11_23471 cd5b12387abd064cbdbd1d027265a1f5 358 Pfam PF01464 Transglycosylase SLT domain 195 317 5.3E-33 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Y11_23471 cd5b12387abd064cbdbd1d027265a1f5 358 Pfam PF11873 Domain of unknown function (DUF3393) 3 190 1.5E-77 T 13-10-2018 IPR024570 Murein transglycosylase-C, N-terminal Y11_23471 cd5b12387abd064cbdbd1d027265a1f5 358 Gene3D G3DSA:1.10.530.10 178 354 2.0E-49 T 13-10-2018 Y11_23471 cd5b12387abd064cbdbd1d027265a1f5 358 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 357 60.589 T 13-10-2018 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 Y11_23471 cd5b12387abd064cbdbd1d027265a1f5 358 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 212 240 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 SUPERFAMILY SSF56672 391 784 3.17E-118 T 13-10-2018 Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 Gene3D G3DSA:3.30.420.10 154 353 1.4E-72 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 Gene3D G3DSA:3.90.1600.30 518 643 9.1E-9 T 13-10-2018 Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 Gene3D G3DSA:3.90.1600.10 354 457 4.3E-30 T 13-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 Gene3D G3DSA:1.10.132.60 646 790 5.1E-61 T 13-10-2018 Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 SUPERFAMILY SSF53098 5 395 9.97E-92 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 495 507 7.2E-10 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 421 434 7.2E-10 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 547 555 7.2E-10 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 Gene3D G3DSA:3.30.70.2250 42 108 1.3E-57 T 13-10-2018 Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 Gene3D G3DSA:2.40.50.590 7 151 1.3E-57 T 13-10-2018 Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 Pfam PF00136 DNA polymerase family B 386 744 7.9E-42 T 13-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 SMART SM00486 151 561 3.0E-64 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 Gene3D G3DSA:1.10.287.690 471 517 3.2E-25 T 13-10-2018 Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 Pfam PF03104 DNA polymerase family B, exonuclease domain 73 166 3.2E-5 T 13-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 Pfam PF03104 DNA polymerase family B, exonuclease domain 210 302 5.1E-5 T 13-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_38681 776f766a9f8dc64f6c04b61f6fb67939 790 ProSitePatterns PS00116 DNA polymerase family B signature. 549 557 - T 13-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_19891 8e26c69d01af87b4869bf73df764b1a9 540 Pfam PF02254 TrkA-N domain 398 511 2.3E-21 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Y11_19891 8e26c69d01af87b4869bf73df764b1a9 540 Gene3D G3DSA:1.20.1530.20 1 374 6.2E-77 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily Y11_19891 8e26c69d01af87b4869bf73df764b1a9 540 Gene3D G3DSA:3.40.50.720 390 527 5.3E-27 T 13-10-2018 Y11_19891 8e26c69d01af87b4869bf73df764b1a9 540 Pfam PF00999 Sodium/hydrogen exchanger family 2 361 8.7E-77 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Y11_19891 8e26c69d01af87b4869bf73df764b1a9 540 SUPERFAMILY SSF51735 395 524 1.61E-26 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_19891 8e26c69d01af87b4869bf73df764b1a9 540 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 1 271 1.4E-80 T 13-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 Y11_03751 89fcbe2050367eff6775c8b560a1912d 238 Gene3D G3DSA:1.10.3720.10 2 233 1.6E-47 T 13-10-2018 IPR035906 MetI-like superfamily Y11_03751 89fcbe2050367eff6775c8b560a1912d 238 SUPERFAMILY SSF161098 7 216 1.31E-36 T 13-10-2018 IPR035906 MetI-like superfamily Y11_03751 89fcbe2050367eff6775c8b560a1912d 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 231 7.0E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_03751 89fcbe2050367eff6775c8b560a1912d 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 4 79 2.4E-13 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Y11_13771 01a6032d59ef576369ff98f57de969bd 46 Gene3D G3DSA:1.10.10.60 7 44 4.7E-5 T 13-10-2018 Y11_13771 01a6032d59ef576369ff98f57de969bd 46 SUPERFAMILY SSF46689 10 42 9.41E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_02531 0e880d2e2f37b05a1cc43052a435b4e1 400 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 400 116.469 T 13-10-2018 IPR008135 Competence-induced protein CinA Y11_02531 0e880d2e2f37b05a1cc43052a435b4e1 400 SMART SM00852 5 172 4.9E-34 T 13-10-2018 IPR001453 MoaB/Mog domain Y11_02531 0e880d2e2f37b05a1cc43052a435b4e1 400 PIRSF PIRSF006728 1 385 7.3E-113 T 13-10-2018 IPR008135 Competence-induced protein CinA Y11_02531 0e880d2e2f37b05a1cc43052a435b4e1 400 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 398 4.8E-124 T 13-10-2018 IPR008135 Competence-induced protein CinA Y11_02531 0e880d2e2f37b05a1cc43052a435b4e1 400 Pfam PF00994 Probable molybdopterin binding domain 6 170 1.8E-32 T 13-10-2018 IPR001453 MoaB/Mog domain Y11_02531 0e880d2e2f37b05a1cc43052a435b4e1 400 Gene3D G3DSA:3.40.980.10 1 172 2.8E-48 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Y11_02531 0e880d2e2f37b05a1cc43052a435b4e1 400 SUPERFAMILY SSF53218 1 204 7.98E-37 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Y11_02531 0e880d2e2f37b05a1cc43052a435b4e1 400 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 165 7.7E-32 T 13-10-2018 IPR001453 MoaB/Mog domain Y11_02531 0e880d2e2f37b05a1cc43052a435b4e1 400 SUPERFAMILY SSF142433 249 380 3.53E-5 T 13-10-2018 IPR036653 CinA-like, C-terminal Y11_43081 aed78b35e07a5863d7d3863e88a1e94d 422 Gene3D G3DSA:1.10.760.10 168 284 1.6E-6 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Y11_43081 aed78b35e07a5863d7d3863e88a1e94d 422 Pfam PF00034 Cytochrome c 33 131 6.2E-7 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_43081 aed78b35e07a5863d7d3863e88a1e94d 422 PIRSF PIRSF000018 1 422 1.1E-155 T 13-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 Y11_43081 aed78b35e07a5863d7d3863e88a1e94d 422 SUPERFAMILY SSF46626 19 155 1.71E-23 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Y11_43081 aed78b35e07a5863d7d3863e88a1e94d 422 Gene3D G3DSA:1.10.760.10 299 422 4.9E-26 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Y11_43081 aed78b35e07a5863d7d3863e88a1e94d 422 Gene3D G3DSA:1.10.760.10 1 143 1.1E-11 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Y11_43081 aed78b35e07a5863d7d3863e88a1e94d 422 SUPERFAMILY SSF46626 308 416 2.74E-21 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Y11_43081 aed78b35e07a5863d7d3863e88a1e94d 422 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 318 400 9.1E-9 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_43081 aed78b35e07a5863d7d3863e88a1e94d 422 SUPERFAMILY SSF46626 174 283 1.6E-16 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Y11_01221 aebee926482dc38f537f1beccbb1db10 343 Gene3D G3DSA:3.40.50.2300 75 306 8.0E-73 T 13-10-2018 Y11_01221 aebee926482dc38f537f1beccbb1db10 343 Pfam PF13377 Periplasmic binding protein-like domain 172 331 2.8E-33 T 13-10-2018 Y11_01221 aebee926482dc38f537f1beccbb1db10 343 SUPERFAMILY SSF47413 2 59 5.23E-19 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_01221 aebee926482dc38f537f1beccbb1db10 343 Gene3D G3DSA:3.40.50.2300 162 292 8.0E-73 T 13-10-2018 Y11_01221 aebee926482dc38f537f1beccbb1db10 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 Y11_01221 aebee926482dc38f537f1beccbb1db10 343 SUPERFAMILY SSF53822 61 336 6.87E-71 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_01221 aebee926482dc38f537f1beccbb1db10 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.2E-21 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_01221 aebee926482dc38f537f1beccbb1db10 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.0E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_01221 aebee926482dc38f537f1beccbb1db10 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.0E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_01221 aebee926482dc38f537f1beccbb1db10 343 Gene3D G3DSA:1.10.260.40 1 58 9.8E-24 T 13-10-2018 Y11_01221 aebee926482dc38f537f1beccbb1db10 343 SMART SM00354 1 71 8.7E-34 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_20981 72fd577b01a816784ae24081a97b9ec8 612 PIRSF PIRSF036918 1 611 1.8E-234 T 13-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 Y11_20981 72fd577b01a816784ae24081a97b9ec8 612 SUPERFAMILY SSF51011 532 610 1.7E-8 T 13-10-2018 Y11_20981 72fd577b01a816784ae24081a97b9ec8 612 Pfam PF00128 Alpha amylase, catalytic domain 179 495 1.3E-74 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Y11_20981 72fd577b01a816784ae24081a97b9ec8 612 SMART SM00642 129 523 2.6E-82 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Y11_20981 72fd577b01a816784ae24081a97b9ec8 612 Gene3D G3DSA:2.60.40.1180 527 610 8.5E-7 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta Y11_20981 72fd577b01a816784ae24081a97b9ec8 612 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 5 107 9.3E-5 T 13-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 Y11_20981 72fd577b01a816784ae24081a97b9ec8 612 Gene3D G3DSA:3.20.20.80 118 525 1.8E-125 T 13-10-2018 Y11_20981 72fd577b01a816784ae24081a97b9ec8 612 SUPERFAMILY SSF51445 119 532 3.66E-93 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_03721 fcd55f06b0a858feb98ad8ce0593e482 249 Gene3D G3DSA:3.40.190.10 114 207 9.3E-85 T 13-10-2018 Y11_03721 fcd55f06b0a858feb98ad8ce0593e482 249 SMART SM00062 28 248 2.8E-85 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_03721 fcd55f06b0a858feb98ad8ce0593e482 249 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site Y11_03721 fcd55f06b0a858feb98ad8ce0593e482 249 SUPERFAMILY SSF53850 1 248 4.35E-74 T 13-10-2018 Y11_03721 fcd55f06b0a858feb98ad8ce0593e482 249 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 248 1.6E-71 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_03721 fcd55f06b0a858feb98ad8ce0593e482 249 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 247 8.3E-89 T 13-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 Y11_03721 fcd55f06b0a858feb98ad8ce0593e482 249 SMART SM00079 28 249 0.0013 T 13-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Y11_03721 fcd55f06b0a858feb98ad8ce0593e482 249 Gene3D G3DSA:3.40.190.10 32 246 9.3E-85 T 13-10-2018 Y11_05791 346e917bfac01c0b9f089fb6d8177f90 413 Gene3D G3DSA:1.20.1250.20 201 399 3.7E-65 T 13-10-2018 Y11_05791 346e917bfac01c0b9f089fb6d8177f90 413 SUPERFAMILY SSF103473 8 400 1.44E-39 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_05791 346e917bfac01c0b9f089fb6d8177f90 413 ProSitePatterns PS00896 LacY family proton/sugar symporters signature 1. 64 78 - T 13-10-2018 IPR018457 LacY/RafB permease family, conserved site Y11_05791 346e917bfac01c0b9f089fb6d8177f90 413 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 7 397 5.3E-141 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 Y11_05791 346e917bfac01c0b9f089fb6d8177f90 413 Pfam PF01306 LacY proton/sugar symporter 6 400 1.8E-141 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 Y11_05791 346e917bfac01c0b9f089fb6d8177f90 413 Gene3D G3DSA:1.20.1250.20 5 194 5.3E-36 T 13-10-2018 Y11_05791 346e917bfac01c0b9f089fb6d8177f90 413 PRINTS PR00174 LacY proton/sugar symporter family signature 257 278 3.3E-80 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 Y11_05791 346e917bfac01c0b9f089fb6d8177f90 413 PRINTS PR00174 LacY proton/sugar symporter family signature 281 307 3.3E-80 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 Y11_05791 346e917bfac01c0b9f089fb6d8177f90 413 PRINTS PR00174 LacY proton/sugar symporter family signature 103 125 3.3E-80 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 Y11_05791 346e917bfac01c0b9f089fb6d8177f90 413 PRINTS PR00174 LacY proton/sugar symporter family signature 212 240 3.3E-80 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 Y11_05791 346e917bfac01c0b9f089fb6d8177f90 413 PRINTS PR00174 LacY proton/sugar symporter family signature 68 97 3.3E-80 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 Y11_05791 346e917bfac01c0b9f089fb6d8177f90 413 PRINTS PR00174 LacY proton/sugar symporter family signature 145 163 3.3E-80 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 Y11_05791 346e917bfac01c0b9f089fb6d8177f90 413 PRINTS PR00174 LacY proton/sugar symporter family signature 343 363 3.3E-80 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 Y11_05791 346e917bfac01c0b9f089fb6d8177f90 413 PRINTS PR00174 LacY proton/sugar symporter family signature 312 331 3.3E-80 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 Y11_09461 6e55d1624b0d2c85e390917a1f138208 329 SUPERFAMILY SSF56317 6 306 1.22E-53 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Y11_09461 6e55d1624b0d2c85e390917a1f138208 329 Gene3D G3DSA:3.60.110.10 7 303 6.0E-55 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Y11_09461 6e55d1624b0d2c85e390917a1f138208 329 Pfam PF00795 Carbon-nitrogen hydrolase 8 283 3.1E-37 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Y11_34751 af2c93e09bf576d4f2393af348e09eb3 729 SUPERFAMILY SSF48179 621 714 2.21E-23 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_34751 af2c93e09bf576d4f2393af348e09eb3 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Y11_34751 af2c93e09bf576d4f2393af348e09eb3 729 SUPERFAMILY SSF52096 2 303 1.19E-69 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Y11_34751 af2c93e09bf576d4f2393af348e09eb3 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 13-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Y11_34751 af2c93e09bf576d4f2393af348e09eb3 729 Gene3D G3DSA:1.10.1040.50 497 709 3.9E-73 T 13-10-2018 Y11_34751 af2c93e09bf576d4f2393af348e09eb3 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 205 1.2E-41 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Y11_34751 af2c93e09bf576d4f2393af348e09eb3 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 4.7E-60 T 13-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Y11_34751 af2c93e09bf576d4f2393af348e09eb3 729 Gene3D G3DSA:3.40.50.720 314 496 3.9E-65 T 13-10-2018 Y11_34751 af2c93e09bf576d4f2393af348e09eb3 729 SUPERFAMILY SSF51735 314 495 6.85E-56 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_34751 af2c93e09bf576d4f2393af348e09eb3 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 52.251 T 13-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Y11_34751 af2c93e09bf576d4f2393af348e09eb3 729 SUPERFAMILY SSF48179 495 609 8.5E-29 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_34751 af2c93e09bf576d4f2393af348e09eb3 729 Gene3D G3DSA:3.90.226.10 1 311 1.2E-94 T 13-10-2018 Y11_34751 af2c93e09bf576d4f2393af348e09eb3 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 1.6E-25 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Y11_34751 af2c93e09bf576d4f2393af348e09eb3 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 13-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Y11_42541 48b6910c22c2c6c9fefcd779270e0296 540 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 5 537 28.08 T 13-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Y11_42541 48b6910c22c2c6c9fefcd779270e0296 540 Pfam PF00795 Carbon-nitrogen hydrolase 7 239 1.1E-25 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Y11_42541 48b6910c22c2c6c9fefcd779270e0296 540 Gene3D G3DSA:3.60.110.10 1 256 3.3E-87 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Y11_42541 48b6910c22c2c6c9fefcd779270e0296 540 Pfam PF02540 NAD synthase 264 511 3.0E-71 T 13-10-2018 IPR022310 NAD/GMP synthase Y11_42541 48b6910c22c2c6c9fefcd779270e0296 540 TIGRFAM TIGR00552 nadE: NAD+ synthetase 265 511 4.3E-58 T 13-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Y11_42541 48b6910c22c2c6c9fefcd779270e0296 540 SUPERFAMILY SSF52402 258 520 1.26E-77 T 13-10-2018 Y11_42541 48b6910c22c2c6c9fefcd779270e0296 540 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 37 52 - T 13-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 Y11_42541 48b6910c22c2c6c9fefcd779270e0296 540 Gene3D G3DSA:3.40.50.620 261 539 1.1E-112 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_42541 48b6910c22c2c6c9fefcd779270e0296 540 PIRSF PIRSF006630 245 539 3.3E-120 T 13-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Y11_42541 48b6910c22c2c6c9fefcd779270e0296 540 PIRSF PIRSF006630 2 258 1.4E-80 T 13-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Y11_42541 48b6910c22c2c6c9fefcd779270e0296 540 SUPERFAMILY SSF56317 3 241 1.83E-60 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Y11_08061 718becbf37dcbbf15f1b192f654c75cb 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 158 2.4E-8 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Y11_08061 718becbf37dcbbf15f1b192f654c75cb 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 326 2.9E-18 T 13-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 Y11_08061 718becbf37dcbbf15f1b192f654c75cb 338 Gene3D G3DSA:3.30.930.10 2 249 4.2E-89 T 13-10-2018 Y11_08061 718becbf37dcbbf15f1b192f654c75cb 338 SUPERFAMILY SSF82649 248 336 7.32E-22 T 13-10-2018 Y11_08061 718becbf37dcbbf15f1b192f654c75cb 338 SUPERFAMILY SSF55681 4 247 1.16E-79 T 13-10-2018 Y11_08061 718becbf37dcbbf15f1b192f654c75cb 338 Gene3D G3DSA:3.30.390.50 250 338 1.6E-28 T 13-10-2018 Y11_08061 718becbf37dcbbf15f1b192f654c75cb 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 57.926 T 13-10-2018 IPR023741 Lipoate-protein ligase A GO:0009249|GO:0016979 KEGG: 00785+6.3.1.20 Y11_08061 718becbf37dcbbf15f1b192f654c75cb 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 326 7.9E-125 T 13-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 Y11_02441 0c109b1e75780fe9a74c1d47c361ce6d 557 Gene3D G3DSA:3.40.50.970 354 557 5.8E-61 T 13-10-2018 Y11_02441 0c109b1e75780fe9a74c1d47c361ce6d 557 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 554 32.432 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Y11_02441 0c109b1e75780fe9a74c1d47c361ce6d 557 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 420 536 5.2E-7 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Y11_02441 0c109b1e75780fe9a74c1d47c361ce6d 557 SUPERFAMILY SSF52518 366 553 1.77E-31 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_02441 0c109b1e75780fe9a74c1d47c361ce6d 557 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 389 1.7E-86 T 13-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Y11_02441 0c109b1e75780fe9a74c1d47c361ce6d 557 SUPERFAMILY SSF52518 7 175 2.3E-30 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_02441 0c109b1e75780fe9a74c1d47c361ce6d 557 Gene3D G3DSA:3.40.50.1220 212 337 3.8E-46 T 13-10-2018 Y11_02441 0c109b1e75780fe9a74c1d47c361ce6d 557 PIRSF PIRSF004983 1 557 5.1E-176 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Y11_02441 0c109b1e75780fe9a74c1d47c361ce6d 557 SUPERFAMILY SSF52467 204 360 1.5E-6 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Y11_02441 0c109b1e75780fe9a74c1d47c361ce6d 557 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 133 2.2E-26 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Y11_02441 0c109b1e75780fe9a74c1d47c361ce6d 557 Gene3D G3DSA:3.40.50.970 1 196 3.2E-61 T 13-10-2018 Y11_02441 0c109b1e75780fe9a74c1d47c361ce6d 557 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 431 5.5E-139 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Y11_28911 9538211fe75b23998e85585a52003075 321 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 312 7.9E-72 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Y11_28911 9538211fe75b23998e85585a52003075 321 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 319 4.9E-126 T 13-10-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 Y11_28911 9538211fe75b23998e85585a52003075 321 Gene3D G3DSA:3.40.50.2000 164 320 4.7E-56 T 13-10-2018 Y11_28911 9538211fe75b23998e85585a52003075 321 SUPERFAMILY SSF53756 1 320 1.15E-76 T 13-10-2018 Y11_28911 9538211fe75b23998e85585a52003075 321 Gene3D G3DSA:3.40.50.2000 1 163 2.2E-62 T 13-10-2018 Y11_08841 2c8069924bd913eef125a8df201ee291 313 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 10 271 56.921 T 13-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 Y11_08841 2c8069924bd913eef125a8df201ee291 313 Gene3D G3DSA:3.40.50.620 2 272 5.0E-46 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_08841 2c8069924bd913eef125a8df201ee291 313 PIRSF PIRSF004976 2 273 9.5E-75 T 13-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 Y11_08841 2c8069924bd913eef125a8df201ee291 313 SUPERFAMILY SSF52402 17 236 1.36E-53 T 13-10-2018 Y11_08841 2c8069924bd913eef125a8df201ee291 313 Pfam PF01171 PP-loop family 42 202 1.9E-12 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Y11_01561 9b3d442113d9c7620246137fedf35dae 73 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 2 71 9.3E-13 T 13-10-2018 IPR000160 GGDEF domain Y11_01561 9b3d442113d9c7620246137fedf35dae 73 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1 69 2.4E-10 T 13-10-2018 IPR000160 GGDEF domain Y11_01561 9b3d442113d9c7620246137fedf35dae 73 SUPERFAMILY SSF55073 2 71 1.57E-12 T 13-10-2018 IPR029787 Nucleotide cyclase Y11_01561 9b3d442113d9c7620246137fedf35dae 73 Gene3D G3DSA:3.30.70.270 1 72 8.3E-15 T 13-10-2018 Y11_03911 3534e25c01199b946a74e04cb525d1f4 85 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 13-10-2018 IPR019844 Cold-shock conserved site Y11_03911 3534e25c01199b946a74e04cb525d1f4 85 SMART SM00357 3 67 9.2E-28 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Y11_03911 3534e25c01199b946a74e04cb525d1f4 85 Gene3D G3DSA:2.40.50.140 2 65 2.2E-25 T 13-10-2018 Y11_03911 3534e25c01199b946a74e04cb525d1f4 85 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 4.5E-28 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_03911 3534e25c01199b946a74e04cb525d1f4 85 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 66 7.2E-41 T 13-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 Y11_03911 3534e25c01199b946a74e04cb525d1f4 85 PIRSF PIRSF002599 1 82 4.1E-23 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 Y11_03911 3534e25c01199b946a74e04cb525d1f4 85 SUPERFAMILY SSF50249 1 66 1.25E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_03911 3534e25c01199b946a74e04cb525d1f4 85 PRINTS PR00050 Cold shock protein signature 4 19 1.1E-14 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_03911 3534e25c01199b946a74e04cb525d1f4 85 PRINTS PR00050 Cold shock protein signature 40 58 1.1E-14 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_03911 3534e25c01199b946a74e04cb525d1f4 85 PRINTS PR00050 Cold shock protein signature 25 34 1.1E-14 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_23221 143a95f1cd2a3a5b94a35a021eeb6cd3 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Y11_23221 143a95f1cd2a3a5b94a35a021eeb6cd3 384 SUPERFAMILY SSF55973 3 109 2.08E-47 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Y11_23221 143a95f1cd2a3a5b94a35a021eeb6cd3 384 Gene3D G3DSA:3.30.300.10 103 372 1.4E-180 T 13-10-2018 Y11_23221 143a95f1cd2a3a5b94a35a021eeb6cd3 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 5.1E-70 T 13-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Y11_23221 143a95f1cd2a3a5b94a35a021eeb6cd3 384 SUPERFAMILY SSF55973 112 232 2.71E-52 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Y11_23221 143a95f1cd2a3a5b94a35a021eeb6cd3 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 7.4E-200 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Y11_23221 143a95f1cd2a3a5b94a35a021eeb6cd3 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Y11_23221 143a95f1cd2a3a5b94a35a021eeb6cd3 384 Gene3D G3DSA:3.30.300.10 11 270 1.4E-180 T 13-10-2018 Y11_23221 143a95f1cd2a3a5b94a35a021eeb6cd3 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 2.9E-43 T 13-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Y11_23221 143a95f1cd2a3a5b94a35a021eeb6cd3 384 Gene3D G3DSA:3.30.300.10 5 233 1.4E-180 T 13-10-2018 Y11_23221 143a95f1cd2a3a5b94a35a021eeb6cd3 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.743 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Y11_23221 143a95f1cd2a3a5b94a35a021eeb6cd3 384 PIRSF PIRSF000497 1 381 1.4E-174 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Y11_23221 143a95f1cd2a3a5b94a35a021eeb6cd3 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.2E-45 T 13-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Y11_23221 143a95f1cd2a3a5b94a35a021eeb6cd3 384 SUPERFAMILY SSF55973 233 382 7.46E-72 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Y11_01601 8817ecc274913f1438b8794fa28b86d0 460 Gene3D G3DSA:3.20.20.80 3 458 9.5E-150 T 13-10-2018 Y11_01601 8817ecc274913f1438b8794fa28b86d0 460 SUPERFAMILY SSF51445 1 460 3.02E-158 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_01601 8817ecc274913f1438b8794fa28b86d0 460 Pfam PF00232 Glycosyl hydrolase family 1 2 458 7.9E-131 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_01601 8817ecc274913f1438b8794fa28b86d0 460 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 360 368 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site Y11_01601 8817ecc274913f1438b8794fa28b86d0 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 383 394 4.7E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_01601 8817ecc274913f1438b8794fa28b86d0 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 428 440 4.7E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_01601 8817ecc274913f1438b8794fa28b86d0 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 4.7E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_01601 8817ecc274913f1438b8794fa28b86d0 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 404 421 4.7E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_01601 8817ecc274913f1438b8794fa28b86d0 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 4.7E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_04641 affec6fcc77cb9ca5470065644f23436 168 Gene3D G3DSA:3.40.50.300 32 145 5.5E-26 T 13-10-2018 Y11_04641 affec6fcc77cb9ca5470065644f23436 168 PIRSF PIRSF003093 1 168 1.1E-82 T 13-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 Y11_04641 affec6fcc77cb9ca5470065644f23436 168 SUPERFAMILY SSF52540 32 146 1.38E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_04641 affec6fcc77cb9ca5470065644f23436 168 Pfam PF03846 Cell division inhibitor SulA 10 120 1.8E-53 T 13-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 Y11_04641 affec6fcc77cb9ca5470065644f23436 168 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 168 40.254 T 13-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 Y11_23391 c4b971d09940a01149e893d2bf680cc2 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 2.7E-67 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Y11_23391 c4b971d09940a01149e893d2bf680cc2 197 Pfam PF01725 Ham1 family 4 192 8.5E-57 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Y11_23391 c4b971d09940a01149e893d2bf680cc2 197 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 50.112 T 13-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Y11_23391 c4b971d09940a01149e893d2bf680cc2 197 SUPERFAMILY SSF52972 1 196 9.68E-74 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Y11_23391 c4b971d09940a01149e893d2bf680cc2 197 Gene3D G3DSA:3.90.950.10 1 197 9.5E-83 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Y11_01031 4f9d603ef5d0702a4afdf3adbe695f5d 176 Pfam PF09900 Predicted membrane protein (DUF2127) 23 161 4.3E-31 T 13-10-2018 IPR021125 Protein of unknown function DUF2127 Y11_01031 4f9d603ef5d0702a4afdf3adbe695f5d 176 PIRSF PIRSF034455 3 171 2.1E-49 T 13-10-2018 IPR014591 Uncharacterised conserved protein UCP034455 Y11_38761 03e75216075217607ea385c9895712c9 299 PIRSF PIRSF000371 1 297 1.1E-93 T 13-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Y11_38761 03e75216075217607ea385c9895712c9 299 SUPERFAMILY SSF102114 109 262 1.31E-16 T 13-10-2018 Y11_38761 03e75216075217607ea385c9895712c9 299 Pfam PF04055 Radical SAM superfamily 19 228 3.0E-24 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_38761 03e75216075217607ea385c9895712c9 299 Pfam PF13353 4Fe-4S single cluster domain 12 156 9.1E-13 T 13-10-2018 Y11_38761 03e75216075217607ea385c9895712c9 299 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 2 290 3.2E-104 T 13-10-2018 Y11_38761 03e75216075217607ea385c9895712c9 299 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Y11_38761 03e75216075217607ea385c9895712c9 299 SUPERFAMILY SSF54862 4 143 3.14E-7 T 13-10-2018 Y11_33241 df0e57e2331c6582be53f15552ead34c 373 SUPERFAMILY SSF102405 77 282 2.9E-41 T 13-10-2018 Y11_33241 df0e57e2331c6582be53f15552ead34c 373 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 66 282 3.2E-81 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Y11_33241 df0e57e2331c6582be53f15552ead34c 373 Pfam PF02481 DNA recombination-mediator protein A 69 273 4.3E-75 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Y11_33241 df0e57e2331c6582be53f15552ead34c 373 Gene3D G3DSA:3.40.50.450 2 285 2.0E-87 T 13-10-2018 Y11_p0341 d27a8474d8a670b57c1e4a0bc5446c57 170 Gene3D G3DSA:3.30.420.10 65 169 3.3E-10 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_p0341 d27a8474d8a670b57c1e4a0bc5446c57 170 SUPERFAMILY SSF53098 63 165 9.26E-21 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_p0341 d27a8474d8a670b57c1e4a0bc5446c57 170 Pfam PF00665 Integrase core domain 67 165 4.1E-14 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_26981 86edc151be2e230673e910a48e21ea68 1165 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 33 316 3.8E-96 T 13-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 Y11_26981 86edc151be2e230673e910a48e21ea68 1165 SUPERFAMILY SSF69318 381 635 2.75E-21 T 13-10-2018 Y11_26981 86edc151be2e230673e910a48e21ea68 1165 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 637 811 1.0E-27 T 13-10-2018 IPR022045 Insecticide toxin TcdB middle/N-terminal Y11_26981 86edc151be2e230673e910a48e21ea68 1165 Pfam PF12255 Insecticide toxin TcdB middle/C-terminal region 861 999 2.6E-48 T 13-10-2018 IPR022044 Insecticide toxin TcdB middle/C-terminal Y11_26981 86edc151be2e230673e910a48e21ea68 1165 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 264 283 1.4E-34 T 13-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 Y11_26981 86edc151be2e230673e910a48e21ea68 1165 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 188 206 1.4E-34 T 13-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 Y11_26981 86edc151be2e230673e910a48e21ea68 1165 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 297 315 1.4E-34 T 13-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 Y11_26981 86edc151be2e230673e910a48e21ea68 1165 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 30 51 1.4E-34 T 13-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 Y11_26981 86edc151be2e230673e910a48e21ea68 1165 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 89 105 1.4E-34 T 13-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 Y11_23351 02229e6c1f59b5641143da9bcedd2b24 231 PIRSF PIRSF004848 1 231 1.5E-73 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Y11_23351 02229e6c1f59b5641143da9bcedd2b24 231 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 1.8E-91 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Y11_23351 02229e6c1f59b5641143da9bcedd2b24 231 Pfam PF01168 Alanine racemase, N-terminal domain 7 230 8.9E-28 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_23351 02229e6c1f59b5641143da9bcedd2b24 231 SUPERFAMILY SSF51419 1 228 4.58E-80 T 13-10-2018 IPR029066 PLP-binding barrel Y11_23351 02229e6c1f59b5641143da9bcedd2b24 231 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Y11_23351 02229e6c1f59b5641143da9bcedd2b24 231 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 33.184 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Y11_23351 02229e6c1f59b5641143da9bcedd2b24 231 Gene3D G3DSA:3.20.20.10 1 231 9.2E-83 T 13-10-2018 IPR029066 PLP-binding barrel Y11_39611 60bbe593ec4d346893d4992cf06cefcc 834 Gene3D G3DSA:1.20.5.100 69 110 3.2E-20 T 13-10-2018 Y11_39611 60bbe593ec4d346893d4992cf06cefcc 834 Gene3D G3DSA:3.30.2060.10 125 214 1.2E-264 T 13-10-2018 Y11_39611 60bbe593ec4d346893d4992cf06cefcc 834 SUPERFAMILY SSF56601 376 790 1.59E-105 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_39611 60bbe593ec4d346893d4992cf06cefcc 834 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 83 809 0.0 T 13-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_39611 60bbe593ec4d346893d4992cf06cefcc 834 Pfam PF00912 Transglycosylase 223 394 9.7E-55 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_39611 60bbe593ec4d346893d4992cf06cefcc 834 Gene3D G3DSA:3.40.710.10 117 775 1.2E-264 T 13-10-2018 Y11_39611 60bbe593ec4d346893d4992cf06cefcc 834 SUPERFAMILY SSF53955 211 416 9.56E-66 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Y11_39611 60bbe593ec4d346893d4992cf06cefcc 834 Pfam PF14814 Bifunctional transglycosylase second domain 127 211 1.4E-28 T 13-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_39611 60bbe593ec4d346893d4992cf06cefcc 834 SUPERFAMILY SSF52540 119 176 7.97E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_39611 60bbe593ec4d346893d4992cf06cefcc 834 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 93 6.9E-29 T 13-10-2018 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain Y11_39611 60bbe593ec4d346893d4992cf06cefcc 834 Gene3D G3DSA:1.10.3810.10 215 418 1.2E-264 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_39611 60bbe593ec4d346893d4992cf06cefcc 834 PIRSF PIRSF002799 53 834 0.0 T 13-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_39611 60bbe593ec4d346893d4992cf06cefcc 834 Pfam PF00905 Penicillin binding protein transpeptidase domain 487 733 1.6E-21 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Y11_03461 7177cae9931896e3a3e2cad1707d21d7 358 PRINTS PR00682 Isopenicillin N synthase signature 210 231 2.2E-11 T 13-10-2018 Y11_03461 7177cae9931896e3a3e2cad1707d21d7 358 PRINTS PR00682 Isopenicillin N synthase signature 39 56 2.2E-11 T 13-10-2018 Y11_03461 7177cae9931896e3a3e2cad1707d21d7 358 PRINTS PR00682 Isopenicillin N synthase signature 246 272 2.2E-11 T 13-10-2018 Y11_03461 7177cae9931896e3a3e2cad1707d21d7 358 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 17 140 4.8E-37 T 13-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain Y11_03461 7177cae9931896e3a3e2cad1707d21d7 358 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 189 285 9.3E-18 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 Y11_03461 7177cae9931896e3a3e2cad1707d21d7 358 SUPERFAMILY SSF51197 10 297 2.47E-84 T 13-10-2018 Y11_03461 7177cae9931896e3a3e2cad1707d21d7 358 Gene3D G3DSA:2.60.120.330 7 325 5.3E-86 T 13-10-2018 IPR027443 Isopenicillin N synthase-like Y11_06301 35afd3e2b35d1d4f7774cd6f9f7c2732 321 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 3 115 9.1E-45 T 13-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 Y11_06301 35afd3e2b35d1d4f7774cd6f9f7c2732 321 Pfam PF03610 PTS system fructose IIA component 5 115 8.2E-33 T 13-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 Y11_06301 35afd3e2b35d1d4f7774cd6f9f7c2732 321 Gene3D G3DSA:3.40.50.510 2 135 5.1E-40 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Y11_06301 35afd3e2b35d1d4f7774cd6f9f7c2732 321 Pfam PF03830 PTS system sorbose subfamily IIB component 162 308 3.5E-57 T 13-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 Y11_06301 35afd3e2b35d1d4f7774cd6f9f7c2732 321 SUPERFAMILY SSF52728 160 319 1.57E-56 T 13-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 Y11_06301 35afd3e2b35d1d4f7774cd6f9f7c2732 321 Gene3D G3DSA:3.40.35.10 157 321 2.3E-62 T 13-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 Y11_06301 35afd3e2b35d1d4f7774cd6f9f7c2732 321 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 162 309 1.8E-57 T 13-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 Y11_06301 35afd3e2b35d1d4f7774cd6f9f7c2732 321 SUPERFAMILY SSF53062 3 128 2.75E-35 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Y11_32711 21afc5ed03bdbfc804c7e7f9db3799d5 184 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 2 183 50.514 T 13-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 Y11_32711 21afc5ed03bdbfc804c7e7f9db3799d5 184 Gene3D G3DSA:3.40.50.360 7 180 1.4E-50 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_32711 21afc5ed03bdbfc804c7e7f9db3799d5 184 Pfam PF02525 Flavodoxin-like fold 7 174 1.6E-39 T 13-10-2018 IPR003680 Flavodoxin-like fold Y11_32711 21afc5ed03bdbfc804c7e7f9db3799d5 184 SUPERFAMILY SSF52218 6 177 2.56E-47 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_11401 72f66171e916b96cd236eb39fe0de44f 396 Pfam PF07690 Major Facilitator Superfamily 10 350 4.4E-45 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_11401 72f66171e916b96cd236eb39fe0de44f 396 Gene3D G3DSA:1.20.1720.10 4 382 8.0E-92 T 13-10-2018 Y11_11401 72f66171e916b96cd236eb39fe0de44f 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 372 1.4E-73 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Y11_11401 72f66171e916b96cd236eb39fe0de44f 396 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 74 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Y11_11401 72f66171e916b96cd236eb39fe0de44f 396 PRINTS PR01035 Tetracycline resistance protein signature 14 30 2.9E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Y11_11401 72f66171e916b96cd236eb39fe0de44f 396 PRINTS PR01035 Tetracycline resistance protein signature 301 321 2.9E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Y11_11401 72f66171e916b96cd236eb39fe0de44f 396 PRINTS PR01035 Tetracycline resistance protein signature 129 151 2.9E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Y11_11401 72f66171e916b96cd236eb39fe0de44f 396 SUPERFAMILY SSF103473 4 384 5.62E-59 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_43331 c2e973e3f6ffe0978a3971a7f06216a9 444 Gene3D G3DSA:2.40.30.170 83 305 6.0E-69 T 13-10-2018 Y11_43331 c2e973e3f6ffe0978a3971a7f06216a9 444 Pfam PF13533 Biotin-lipoyl like 90 138 4.5E-16 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Y11_43331 c2e973e3f6ffe0978a3971a7f06216a9 444 Gene3D G3DSA:1.10.287.470 124 197 6.0E-69 T 13-10-2018 Y11_43331 c2e973e3f6ffe0978a3971a7f06216a9 444 Gene3D G3DSA:2.40.50.100 89 233 6.0E-69 T 13-10-2018 Y11_43331 c2e973e3f6ffe0978a3971a7f06216a9 444 Gene3D G3DSA:2.40.420.20 306 399 4.2E-21 T 13-10-2018 Y11_43331 c2e973e3f6ffe0978a3971a7f06216a9 444 Pfam PF13437 HlyD family secretion protein 201 306 1.1E-6 T 13-10-2018 Y11_43331 c2e973e3f6ffe0978a3971a7f06216a9 444 SUPERFAMILY SSF111369 82 321 1.7E-56 T 13-10-2018 Y11_43331 c2e973e3f6ffe0978a3971a7f06216a9 444 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 4 421 54.409 T 13-10-2018 IPR022824 Multidrug resistance protein MdtA Y11_43331 c2e973e3f6ffe0978a3971a7f06216a9 444 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 65 397 4.5E-76 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Y11_08111 f2ef4b6d860e3bf7480a64ff41896298 59 Pfam PF10636 Hemin uptake protein hemP 23 59 2.6E-17 T 13-10-2018 IPR019600 Hemin uptake protein HemP Y11_08111 f2ef4b6d860e3bf7480a64ff41896298 59 Gene3D G3DSA:2.10.70.10 18 59 4.7E-21 T 13-10-2018 Y11_28291 611ef2926d86ac4f42856abf634ed6db 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_28291 611ef2926d86ac4f42856abf634ed6db 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_31971 4ce3461ccdb81b3d38fe899c7e36bc76 698 Gene3D G3DSA:3.20.20.80 144 688 1.4E-124 T 13-10-2018 Y11_31971 4ce3461ccdb81b3d38fe899c7e36bc76 698 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 103 690 3.6E-242 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Y11_31971 4ce3461ccdb81b3d38fe899c7e36bc76 698 SUPERFAMILY SSF51445 145 687 2.53E-148 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_31971 4ce3461ccdb81b3d38fe899c7e36bc76 698 Pfam PF02446 4-alpha-glucanotransferase 151 669 6.3E-132 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Y11_41011 cab9cfd4adc952f8a134eddc0d11793f 285 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 190 208 - T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Y11_41011 cab9cfd4adc952f8a134eddc0d11793f 285 Hamap MF_01974 Methionine aminopeptidase [map]. 25 273 43.141 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Y11_41011 cab9cfd4adc952f8a134eddc0d11793f 285 Gene3D G3DSA:3.90.230.10 24 285 1.8E-116 T 13-10-2018 Y11_41011 cab9cfd4adc952f8a134eddc0d11793f 285 Pfam PF00557 Metallopeptidase family M24 35 264 2.3E-51 T 13-10-2018 IPR000994 Peptidase M24 Y11_41011 cab9cfd4adc952f8a134eddc0d11793f 285 PRINTS PR00599 Methionine aminopeptidase-1 signature 184 196 1.6E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Y11_41011 cab9cfd4adc952f8a134eddc0d11793f 285 PRINTS PR00599 Methionine aminopeptidase-1 signature 114 130 1.6E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Y11_41011 cab9cfd4adc952f8a134eddc0d11793f 285 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 104 1.6E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Y11_41011 cab9cfd4adc952f8a134eddc0d11793f 285 PRINTS PR00599 Methionine aminopeptidase-1 signature 215 227 1.6E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Y11_41011 cab9cfd4adc952f8a134eddc0d11793f 285 SUPERFAMILY SSF55920 25 277 1.57E-89 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like Y11_41011 cab9cfd4adc952f8a134eddc0d11793f 285 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 25 272 2.3E-108 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Y11_02171 c1a516078d55ae594875d3f09e4b63fe 598 SUPERFAMILY SSF143243 25 228 4.58E-60 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02171 c1a516078d55ae594875d3f09e4b63fe 598 SUPERFAMILY SSF56762 224 598 1.11E-121 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02171 c1a516078d55ae594875d3f09e4b63fe 598 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 15 598 72.249 T 13-10-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 Y11_02171 c1a516078d55ae594875d3f09e4b63fe 598 Gene3D G3DSA:1.10.645.20 213 598 1.6E-143 T 13-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02171 c1a516078d55ae594875d3f09e4b63fe 598 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 24 184 24.866 T 13-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02171 c1a516078d55ae594875d3f09e4b63fe 598 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 48 175 1.9E-45 T 13-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02171 c1a516078d55ae594875d3f09e4b63fe 598 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 328 598 4.2E-104 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02171 c1a516078d55ae594875d3f09e4b63fe 598 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 210 598 41.953 T 13-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02171 c1a516078d55ae594875d3f09e4b63fe 598 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 49 176 3.2E-42 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02171 c1a516078d55ae594875d3f09e4b63fe 598 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 104 159 1.0E-26 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02171 c1a516078d55ae594875d3f09e4b63fe 598 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 251 262 - T 13-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02171 c1a516078d55ae594875d3f09e4b63fe 598 Gene3D G3DSA:3.30.460.80 4 156 9.7E-36 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02171 c1a516078d55ae594875d3f09e4b63fe 598 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 214 598 1.3E-175 T 13-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_20631 365afc3f2828aba611dea111a50d6545 204 Pfam PF00510 Cytochrome c oxidase subunit III 16 202 1.5E-14 T 13-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20631 365afc3f2828aba611dea111a50d6545 204 Gene3D G3DSA:1.20.120.80 19 204 3.2E-60 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20631 365afc3f2828aba611dea111a50d6545 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 2.2E-89 T 13-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 Y11_20631 365afc3f2828aba611dea111a50d6545 204 SUPERFAMILY SSF81452 21 202 7.85E-59 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1048 0.0 T 13-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 Gene3D G3DSA:3.30.70.1430 38 821 0.0 T 13-10-2018 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 SUPERFAMILY SSF82866 296 497 6.54E-49 T 13-10-2018 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 SUPERFAMILY SSF82714 182 272 3.66E-21 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 SUPERFAMILY SSF82866 807 1032 4.71E-45 T 13-10-2018 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 3.3E-115 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 3.3E-115 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.3E-115 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 3.3E-115 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 3.3E-115 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 3.3E-115 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 3.3E-115 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.3E-115 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 3.3E-115 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 Gene3D G3DSA:3.30.70.1430 570 674 0.0 T 13-10-2018 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 Gene3D G3DSA:3.30.70.1320 133 330 0.0 T 13-10-2018 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 Gene3D G3DSA:1.20.1640.10 8 515 0.0 T 13-10-2018 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 SUPERFAMILY SSF82693 38 132 5.75E-27 T 13-10-2018 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 Gene3D G3DSA:3.30.2090.10 725 813 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 Gene3D G3DSA:1.20.1640.10 516 1026 0.0 T 13-10-2018 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 SUPERFAMILY SSF82693 135 330 3.92E-28 T 13-10-2018 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 SUPERFAMILY SSF82693 566 670 1.67E-32 T 13-10-2018 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 SUPERFAMILY SSF82714 724 811 1.44E-20 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_20151 b8f7a0dab23681a289f13bd0d663a590 1050 Gene3D G3DSA:3.30.70.1440 675 865 0.0 T 13-10-2018 Y11_01931 65a4fd064400dbb4143853a07d5c0a2f 302 Gene3D G3DSA:3.40.50.720 2 301 4.5E-76 T 13-10-2018 Y11_01931 65a4fd064400dbb4143853a07d5c0a2f 302 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 9.4E-112 T 13-10-2018 IPR010099 Epimerase family protein SDR39U1 Y11_01931 65a4fd064400dbb4143853a07d5c0a2f 302 Pfam PF08338 Domain of unknown function (DUF1731) 250 295 8.3E-20 T 13-10-2018 IPR013549 Domain of unknown function DUF1731 Y11_01931 65a4fd064400dbb4143853a07d5c0a2f 302 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 5.4E-18 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Y11_01931 65a4fd064400dbb4143853a07d5c0a2f 302 SUPERFAMILY SSF51735 1 297 9.9E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_02661 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 7.9E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_02661 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 7.9E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_02661 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 7.9E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_02661 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_02661 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 Gene3D G3DSA:1.10.10.10 145 208 2.0E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_02661 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.611 T 13-10-2018 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 Y11_02661 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 Gene3D G3DSA:3.40.50.2300 1 144 2.8E-30 T 13-10-2018 Y11_02661 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 SUPERFAMILY SSF52172 3 136 2.56E-22 T 13-10-2018 IPR011006 CheY-like superfamily Y11_02661 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 SMART SM00421 148 205 2.3E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_02661 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.4E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_02661 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 SMART SM00448 4 120 4.3E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_02661 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 SUPERFAMILY SSF46894 144 206 1.97E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_02661 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 Pfam PF00072 Response regulator receiver domain 6 120 7.9E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_17991 f8a886611cb1b2a83297268611c934c3 451 SMART SM00490 259 340 2.3E-32 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_17991 f8a886611cb1b2a83297268611c934c3 451 SMART SM00487 20 223 4.7E-58 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Y11_17991 f8a886611cb1b2a83297268611c934c3 451 Pfam PF00271 Helicase conserved C-terminal domain 235 339 3.7E-26 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_17991 f8a886611cb1b2a83297268611c934c3 451 Gene3D G3DSA:3.40.50.300 215 395 2.5E-49 T 13-10-2018 Y11_17991 f8a886611cb1b2a83297268611c934c3 451 SUPERFAMILY SSF52540 75 361 2.96E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_17991 f8a886611cb1b2a83297268611c934c3 451 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Y11_17991 f8a886611cb1b2a83297268611c934c3 451 Gene3D G3DSA:3.40.50.300 1 211 1.9E-76 T 13-10-2018 Y11_17991 f8a886611cb1b2a83297268611c934c3 451 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 450 51.172 T 13-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 Y11_17991 f8a886611cb1b2a83297268611c934c3 451 Pfam PF00270 DEAD/DEAH box helicase 25 195 4.7E-50 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Y11_35181 7b873d1b427cca08a27aa00963bea204 926 Pfam PF01627 Hpt domain 859 923 1.1E-5 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Y11_35181 7b873d1b427cca08a27aa00963bea204 926 SUPERFAMILY SSF55874 451 614 3.93E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_35181 7b873d1b427cca08a27aa00963bea204 926 SUPERFAMILY SSF52172 704 824 1.99E-33 T 13-10-2018 IPR011006 CheY-like superfamily Y11_35181 7b873d1b427cca08a27aa00963bea204 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 559 7.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_35181 7b873d1b427cca08a27aa00963bea204 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 613 7.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_35181 7b873d1b427cca08a27aa00963bea204 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 573 7.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_35181 7b873d1b427cca08a27aa00963bea204 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 594 7.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_35181 7b873d1b427cca08a27aa00963bea204 926 SMART SM00388 397 462 6.2E-22 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_35181 7b873d1b427cca08a27aa00963bea204 926 Gene3D G3DSA:1.10.287.130 363 460 5.0E-24 T 13-10-2018 Y11_35181 7b873d1b427cca08a27aa00963bea204 926 Gene3D G3DSA:3.30.565.10 461 617 1.9E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_35181 7b873d1b427cca08a27aa00963bea204 926 SUPERFAMILY SSF47226 802 910 8.9E-8 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Y11_35181 7b873d1b427cca08a27aa00963bea204 926 Gene3D G3DSA:3.40.50.2300 700 821 9.7E-34 T 13-10-2018 Y11_35181 7b873d1b427cca08a27aa00963bea204 926 SUPERFAMILY SSF47384 384 463 5.3E-18 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_35181 7b873d1b427cca08a27aa00963bea204 926 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 510 614 5.3E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_35181 7b873d1b427cca08a27aa00963bea204 926 Pfam PF00072 Response regulator receiver domain 706 819 1.4E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_35181 7b873d1b427cca08a27aa00963bea204 926 Gene3D G3DSA:1.20.120.160 843 925 1.0E-5 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Y11_35181 7b873d1b427cca08a27aa00963bea204 926 SMART SM00448 704 819 1.7E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_35181 7b873d1b427cca08a27aa00963bea204 926 Pfam PF00512 His Kinase A (phospho-acceptor) domain 402 462 7.2E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_35181 7b873d1b427cca08a27aa00963bea204 926 SMART SM00387 509 616 9.1E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_41091 0984318a4bbc18cc2cd28837535d903b 451 SUPERFAMILY SSF50156 194 290 3.81E-17 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Y11_41091 0984318a4bbc18cc2cd28837535d903b 451 SUPERFAMILY SSF50156 86 181 5.78E-12 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Y11_41091 0984318a4bbc18cc2cd28837535d903b 451 Pfam PF13180 PDZ domain 225 286 9.8E-8 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Y11_41091 0984318a4bbc18cc2cd28837535d903b 451 Pfam PF02163 Peptidase family M50 10 439 7.1E-88 T 13-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Y11_41091 0984318a4bbc18cc2cd28837535d903b 451 Gene3D G3DSA:2.30.42.10 126 220 2.4E-33 T 13-10-2018 Y11_41091 0984318a4bbc18cc2cd28837535d903b 451 Gene3D G3DSA:2.30.42.10 221 310 1.8E-20 T 13-10-2018 Y11_41091 0984318a4bbc18cc2cd28837535d903b 451 SMART SM00228 211 280 1.1E-9 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Y11_41091 0984318a4bbc18cc2cd28837535d903b 451 SMART SM00228 115 186 0.12 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Y11_41091 0984318a4bbc18cc2cd28837535d903b 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 451 9.5E-161 T 13-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 SUPERFAMILY SSF46785 431 498 3.26E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 Gene3D G3DSA:1.10.10.10 502 561 2.7E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 Gene3D G3DSA:3.40.50.300 1 173 3.4E-45 T 13-10-2018 Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 Pfam PF09106 Elongation factor SelB, winged helix 440 495 3.1E-16 T 13-10-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 Gene3D G3DSA:2.40.30.10 176 289 1.5E-24 T 13-10-2018 Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 SUPERFAMILY SSF46785 503 560 9.08E-7 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 622 4.0E-211 T 13-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 Pfam PF09107 Elongation factor SelB, winged helix 575 620 5.9E-20 T 13-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 SUPERFAMILY SSF46785 565 622 7.49E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 SUPERFAMILY SSF52540 2 167 1.0E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 Gene3D G3DSA:1.10.10.10 562 622 1.3E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.3E-7 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.3E-7 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.3E-7 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.3E-7 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 SUPERFAMILY SSF50465 279 364 2.05E-5 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 Pfam PF00009 Elongation factor Tu GTP binding domain 2 166 4.2E-32 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_30521 fda3a729e1785e1fd02a7d4fa5162f20 630 SUPERFAMILY SSF50447 180 299 8.58E-25 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Y11_36691 f8d24971a3bb8e32565e46c33a808b97 150 SUPERFAMILY SSF75420 3 82 2.35E-24 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily Y11_36691 f8d24971a3bb8e32565e46c33a808b97 150 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 150 23.911 T 13-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Y11_36691 f8d24971a3bb8e32565e46c33a808b97 150 Pfam PF17384 RimP C-terminal SH3 domain 85 150 1.6E-22 T 13-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal Y11_36691 f8d24971a3bb8e32565e46c33a808b97 150 Pfam PF02576 RimP N-terminal domain 11 82 2.4E-28 T 13-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal Y11_36691 f8d24971a3bb8e32565e46c33a808b97 150 SUPERFAMILY SSF74942 83 150 1.22E-16 T 13-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Y11_36691 f8d24971a3bb8e32565e46c33a808b97 150 Gene3D G3DSA:3.30.300.70 1 79 6.2E-25 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily Y11_22191 7e950eeab6938ee9802c594060e40ed4 162 SUPERFAMILY SSF142433 5 159 9.55E-58 T 13-10-2018 IPR036653 CinA-like, C-terminal Y11_22191 7e950eeab6938ee9802c594060e40ed4 162 Gene3D G3DSA:3.90.950.20 1 161 7.8E-62 T 13-10-2018 IPR036653 CinA-like, C-terminal Y11_22191 7e950eeab6938ee9802c594060e40ed4 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 158 7.7E-56 T 13-10-2018 IPR008136 CinA, C-terminal Y11_22191 7e950eeab6938ee9802c594060e40ed4 162 Pfam PF02464 Competence-damaged protein 8 159 1.4E-58 T 13-10-2018 IPR008136 CinA, C-terminal Y11_29721 76abdb253cd0352663399de171a9e9d1 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 6.3E-62 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29721 76abdb253cd0352663399de171a9e9d1 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.1E-27 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29721 76abdb253cd0352663399de171a9e9d1 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.1E-27 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29721 76abdb253cd0352663399de171a9e9d1 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.1E-27 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29721 76abdb253cd0352663399de171a9e9d1 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.1E-27 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29721 76abdb253cd0352663399de171a9e9d1 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.1E-27 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29721 76abdb253cd0352663399de171a9e9d1 177 SUPERFAMILY SSF47928 3 104 3.27E-27 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29721 76abdb253cd0352663399de171a9e9d1 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 13-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29721 76abdb253cd0352663399de171a9e9d1 177 Gene3D G3DSA:1.10.520.20 2 106 2.3E-37 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29721 76abdb253cd0352663399de171a9e9d1 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 19.098 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29721 76abdb253cd0352663399de171a9e9d1 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 5.4E-51 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_22911 a595c90a15e85d14d4579fda2216513d 582 Gene3D G3DSA:3.30.413.10 432 574 1.1E-37 T 13-10-2018 Y11_22911 a595c90a15e85d14d4579fda2216513d 582 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 564 1.9E-6 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_22911 a595c90a15e85d14d4579fda2216513d 582 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 179 335 1.4E-44 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_22911 a595c90a15e85d14d4579fda2216513d 582 SUPERFAMILY SSF56014 435 567 1.7E-36 T 13-10-2018 Y11_22911 a595c90a15e85d14d4579fda2216513d 582 SUPERFAMILY SSF56014 156 350 1.15E-57 T 13-10-2018 Y11_22911 a595c90a15e85d14d4579fda2216513d 582 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.1E-8 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_22911 a595c90a15e85d14d4579fda2216513d 582 PRINTS PR00397 Sirohaem Fe-binding site signature 484 502 4.1E-8 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_22911 a595c90a15e85d14d4579fda2216513d 582 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 484 500 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_22911 a595c90a15e85d14d4579fda2216513d 582 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 16 577 58.492 T 13-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_22911 a595c90a15e85d14d4579fda2216513d 582 SUPERFAMILY SSF55124 20 148 1.24E-25 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_22911 a595c90a15e85d14d4579fda2216513d 582 Gene3D G3DSA:3.90.480.20 23 423 1.1E-88 T 13-10-2018 Y11_22911 a595c90a15e85d14d4579fda2216513d 582 Gene3D G3DSA:3.30.413.10 147 354 1.1E-88 T 13-10-2018 Y11_22911 a595c90a15e85d14d4579fda2216513d 582 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 25 565 7.5E-289 T 13-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_22911 a595c90a15e85d14d4579fda2216513d 582 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 86 145 6.2E-13 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_22911 a595c90a15e85d14d4579fda2216513d 582 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 423 1.0E-14 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_22911 a595c90a15e85d14d4579fda2216513d 582 SUPERFAMILY SSF55124 352 428 1.01E-21 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_31311 89ed46cae5d58f2aaf953b14fee8b9b8 314 Pfam PF00294 pfkB family carbohydrate kinase 4 308 2.6E-68 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Y11_31311 89ed46cae5d58f2aaf953b14fee8b9b8 314 SUPERFAMILY SSF53613 1 308 5.77E-73 T 13-10-2018 IPR029056 Ribokinase-like Y11_31311 89ed46cae5d58f2aaf953b14fee8b9b8 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 262 275 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Y11_31311 89ed46cae5d58f2aaf953b14fee8b9b8 314 Gene3D G3DSA:3.40.1190.20 1 312 1.0E-87 T 13-10-2018 IPR029056 Ribokinase-like Y11_01751 83ede903aee4974408589a6756472fbc 262 Pfam PF12833 Helix-turn-helix domain 179 256 3.8E-22 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_01751 83ede903aee4974408589a6756472fbc 262 Pfam PF07883 Cupin domain 26 88 7.6E-7 T 13-10-2018 IPR013096 Cupin 2, conserved barrel Y11_01751 83ede903aee4974408589a6756472fbc 262 SUPERFAMILY SSF51182 15 88 8.21E-13 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_01751 83ede903aee4974408589a6756472fbc 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 239 3.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_01751 83ede903aee4974408589a6756472fbc 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 255 3.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_01751 83ede903aee4974408589a6756472fbc 262 SMART SM00342 173 255 6.5E-22 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_01751 83ede903aee4974408589a6756472fbc 262 Gene3D G3DSA:2.60.120.10 9 97 3.7E-9 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_01751 83ede903aee4974408589a6756472fbc 262 Gene3D G3DSA:1.10.10.60 158 259 1.4E-22 T 13-10-2018 Y11_01751 83ede903aee4974408589a6756472fbc 262 SUPERFAMILY SSF46689 209 257 2.02E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_01751 83ede903aee4974408589a6756472fbc 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 251 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Y11_25831 2d9fa0b9c52c3e2540b818bfe414d35a 483 Gene3D G3DSA:3.40.50.720 3 267 3.1E-49 T 13-10-2018 Y11_25831 2d9fa0b9c52c3e2540b818bfe414d35a 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 204 458 2.0E-69 T 13-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 Y11_25831 2d9fa0b9c52c3e2540b818bfe414d35a 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 7.7E-30 T 13-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 Y11_25831 2d9fa0b9c52c3e2540b818bfe414d35a 483 Gene3D G3DSA:1.10.1040.10 272 483 4.8E-61 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Y11_25831 2d9fa0b9c52c3e2540b818bfe414d35a 483 SUPERFAMILY SSF51735 2 265 1.69E-66 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_25831 2d9fa0b9c52c3e2540b818bfe414d35a 483 SUPERFAMILY SSF48179 273 482 1.22E-50 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_07621 16a44c704688be0400bed7387f800bc3 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 105 182 3.4E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_07621 16a44c704688be0400bed7387f800bc3 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 190 5.3E-28 T 13-10-2018 Y11_07621 16a44c704688be0400bed7387f800bc3 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 2.3E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_07621 16a44c704688be0400bed7387f800bc3 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 2.3E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_07621 16a44c704688be0400bed7387f800bc3 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 2.3E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_07621 16a44c704688be0400bed7387f800bc3 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 2.3E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_07621 16a44c704688be0400bed7387f800bc3 221 Gene3D G3DSA:3.40.50.1000 10 202 1.2E-59 T 13-10-2018 IPR023214 HAD superfamily Y11_07621 16a44c704688be0400bed7387f800bc3 221 Gene3D G3DSA:1.10.150.240 20 91 1.2E-59 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Y11_07621 16a44c704688be0400bed7387f800bc3 221 SUPERFAMILY SSF56784 7 216 2.49E-49 T 13-10-2018 IPR036412 HAD-like superfamily Y11_07621 16a44c704688be0400bed7387f800bc3 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 87 191 2.4E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_01451 2c973360125f0aa266a3ddf19cb9167c 163 SUPERFAMILY SSF53254 1 143 1.28E-17 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Y11_01451 2c973360125f0aa266a3ddf19cb9167c 163 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 73 3.4E-7 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Y11_01451 2c973360125f0aa266a3ddf19cb9167c 163 Gene3D G3DSA:3.40.50.1240 1 161 4.3E-39 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Y11_01451 2c973360125f0aa266a3ddf19cb9167c 163 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 153 9.0E-50 T 13-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 Y11_27841 98406fa7a394c183855df2e0cc386f98 435 ProSitePatterns PS00161 Isocitrate lyase signature. 194 199 - T 13-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 Y11_27841 98406fa7a394c183855df2e0cc386f98 435 SUPERFAMILY SSF51621 5 435 4.35E-154 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Y11_27841 98406fa7a394c183855df2e0cc386f98 435 Pfam PF00463 Isocitrate lyase family 257 435 1.3E-48 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Y11_27841 98406fa7a394c183855df2e0cc386f98 435 Pfam PF00463 Isocitrate lyase family 9 256 3.1E-61 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Y11_27841 98406fa7a394c183855df2e0cc386f98 435 Gene3D G3DSA:3.20.20.60 1 418 3.0E-186 T 13-10-2018 Y11_27841 98406fa7a394c183855df2e0cc386f98 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 257 435 1.1E-88 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Y11_27841 98406fa7a394c183855df2e0cc386f98 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 256 4.2E-114 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Y11_27841 98406fa7a394c183855df2e0cc386f98 435 PIRSF PIRSF001362 1 435 9.2E-225 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Y11_22741 409ac930f5381d1f652838174d32e241 332 Gene3D G3DSA:1.10.10.10 246 322 9.4E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_22741 409ac930f5381d1f652838174d32e241 332 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 50 330 5.0E-144 T 13-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Y11_22741 409ac930f5381d1f652838174d32e241 332 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 12 330 39.918 T 13-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Y11_22741 409ac930f5381d1f652838174d32e241 332 Pfam PF04545 Sigma-70, region 4 264 317 2.7E-15 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Y11_22741 409ac930f5381d1f652838174d32e241 332 Gene3D G3DSA:1.10.601.10 86 168 5.5E-46 T 13-10-2018 Y11_22741 409ac930f5381d1f652838174d32e241 332 Gene3D G3DSA:1.10.10.10 169 244 5.7E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_22741 409ac930f5381d1f652838174d32e241 332 SUPERFAMILY SSF88659 169 243 8.72E-15 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Y11_22741 409ac930f5381d1f652838174d32e241 332 SUPERFAMILY SSF88659 227 324 1.55E-23 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Y11_22741 409ac930f5381d1f652838174d32e241 332 SUPERFAMILY SSF88946 58 166 1.96E-45 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Y11_22741 409ac930f5381d1f652838174d32e241 332 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 120 133 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_22741 409ac930f5381d1f652838174d32e241 332 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 93 319 4.2E-35 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Y11_22741 409ac930f5381d1f652838174d32e241 332 PRINTS PR00046 Major sigma-70 factor signature 268 280 2.5E-27 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_22741 409ac930f5381d1f652838174d32e241 332 PRINTS PR00046 Major sigma-70 factor signature 304 315 2.5E-27 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_22741 409ac930f5381d1f652838174d32e241 332 PRINTS PR00046 Major sigma-70 factor signature 289 304 2.5E-27 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_22741 409ac930f5381d1f652838174d32e241 332 PRINTS PR00046 Major sigma-70 factor signature 120 133 2.5E-27 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_22741 409ac930f5381d1f652838174d32e241 332 PRINTS PR00046 Major sigma-70 factor signature 144 152 2.5E-27 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_22741 409ac930f5381d1f652838174d32e241 332 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 289 315 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_22741 409ac930f5381d1f652838174d32e241 332 Pfam PF04539 Sigma-70 region 3 176 250 2.5E-20 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Y11_22741 409ac930f5381d1f652838174d32e241 332 Pfam PF04542 Sigma-70 region 2 96 165 3.2E-21 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Y11_22741 409ac930f5381d1f652838174d32e241 332 Pfam PF00140 Sigma-70 factor, region 1.2 58 89 5.1E-11 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 Pfam PF03764 Elongation factor G, domain IV 484 604 9.8E-45 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 5.6E-64 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 Gene3D G3DSA:3.40.50.300 1 298 2.6E-108 T 13-10-2018 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 Gene3D G3DSA:2.40.30.10 299 404 4.1E-43 T 13-10-2018 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 SUPERFAMILY SSF54980 407 485 3.31E-25 T 13-10-2018 IPR035647 EF-G domain III/V-like Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 Pfam PF00679 Elongation factor G C-terminus 606 693 1.6E-30 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 108.345 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 Gene3D G3DSA:3.30.70.870 410 485 3.2E-33 T 13-10-2018 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 SUPERFAMILY SSF50447 256 405 7.29E-36 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 SUPERFAMILY SSF52540 6 288 2.95E-103 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 184 1.1E-29 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 Gene3D G3DSA:3.30.70.240 610 681 2.9E-85 T 13-10-2018 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 Pfam PF03144 Elongation factor Tu domain 2 329 396 9.1E-17 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 SUPERFAMILY SSF54211 484 605 2.28E-42 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 SMART SM00889 485 604 7.6E-67 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.2E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.2E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.2E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.2E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.2E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 Gene3D G3DSA:3.30.230.10 489 694 2.9E-85 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 SMART SM00838 606 694 1.3E-51 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 SUPERFAMILY SSF54980 609 696 9.71E-28 T 13-10-2018 IPR035647 EF-G domain III/V-like Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 Pfam PF14492 Elongation Factor G, domain II 409 483 3.5E-35 T 13-10-2018 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 698 0.0 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Y11_22441 98427f1f8a9b98618fe6cdf6b617c495 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Y11_29761 a5a679f97ffa865f540d07694c565ae2 140 SUPERFAMILY SSF46604 90 138 2.88E-15 T 13-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29761 a5a679f97ffa865f540d07694c565ae2 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 21.264 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29761 a5a679f97ffa865f540d07694c565ae2 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 8.3E-13 T 13-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Y11_29761 a5a679f97ffa865f540d07694c565ae2 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 7 85 1.7E-28 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29761 a5a679f97ffa865f540d07694c565ae2 140 Gene3D G3DSA:1.20.5.440 92 135 6.7E-20 T 13-10-2018 Y11_29761 a5a679f97ffa865f540d07694c565ae2 140 SUPERFAMILY SSF51344 4 87 6.93E-24 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29761 a5a679f97ffa865f540d07694c565ae2 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 2.1E-45 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29761 a5a679f97ffa865f540d07694c565ae2 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 88 1.0E-38 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29761 a5a679f97ffa865f540d07694c565ae2 140 Gene3D G3DSA:2.60.15.10 4 91 1.2E-31 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_08801 6ca8295790de5ef485e206c2edaa4915 323 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 2 110 9.2E-16 T 13-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Y11_08801 6ca8295790de5ef485e206c2edaa4915 323 SMART SM00922 130 223 2.3E-18 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Y11_08801 6ca8295790de5ef485e206c2edaa4915 323 Pfam PF13378 Enolase C-terminal domain-like 136 320 5.0E-24 T 13-10-2018 IPR029065 Enolase C-terminal domain-like Y11_08801 6ca8295790de5ef485e206c2edaa4915 323 SUPERFAMILY SSF54826 3 110 7.27E-27 T 13-10-2018 Y11_08801 6ca8295790de5ef485e206c2edaa4915 323 SUPERFAMILY SSF51604 119 319 6.03E-52 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Y11_08801 6ca8295790de5ef485e206c2edaa4915 323 Gene3D G3DSA:3.20.20.120 116 321 5.7E-57 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Y11_08801 6ca8295790de5ef485e206c2edaa4915 323 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 13-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Y11_08801 6ca8295790de5ef485e206c2edaa4915 323 Gene3D G3DSA:3.30.390.10 1 102 5.5E-27 T 13-10-2018 IPR029017 Enolase-like, N-terminal Y11_10381 031d2b416ce13c43926e3a03c052098a 644 SMART SM00955 189 517 3.9E-124 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Y11_10381 031d2b416ce13c43926e3a03c052098a 644 Pfam PF00575 S1 RNA binding domain 560 638 5.0E-10 T 13-10-2018 IPR003029 S1 domain GO:0003676 Y11_10381 031d2b416ce13c43926e3a03c052098a 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 13-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 Y11_10381 031d2b416ce13c43926e3a03c052098a 644 SMART SM00357 23 79 1.5E-12 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Y11_10381 031d2b416ce13c43926e3a03c052098a 644 Gene3D G3DSA:2.40.50.140 558 644 1.2E-34 T 13-10-2018 Y11_10381 031d2b416ce13c43926e3a03c052098a 644 SUPERFAMILY SSF50249 177 556 3.66E-115 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_10381 031d2b416ce13c43926e3a03c052098a 644 SUPERFAMILY SSF50249 8 80 2.32E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_10381 031d2b416ce13c43926e3a03c052098a 644 Pfam PF08206 Ribonuclease B OB domain 24 80 5.9E-19 T 13-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Y11_10381 031d2b416ce13c43926e3a03c052098a 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 643 3.0E-218 T 13-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Y11_10381 031d2b416ce13c43926e3a03c052098a 644 Gene3D G3DSA:2.40.50.640 83 155 1.7E-29 T 13-10-2018 Y11_10381 031d2b416ce13c43926e3a03c052098a 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 13-10-2018 IPR022966 Ribonuclease II/R, conserved site Y11_10381 031d2b416ce13c43926e3a03c052098a 644 Pfam PF00773 RNB domain 189 516 2.5E-85 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Y11_10381 031d2b416ce13c43926e3a03c052098a 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 44.894 T 13-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 Y11_10381 031d2b416ce13c43926e3a03c052098a 644 Gene3D G3DSA:2.40.50.140 1 82 1.7E-30 T 13-10-2018 Y11_10381 031d2b416ce13c43926e3a03c052098a 644 SUPERFAMILY SSF50249 83 171 1.46E-30 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_10381 031d2b416ce13c43926e3a03c052098a 644 SUPERFAMILY SSF50249 560 642 3.24E-20 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_41201 3e88ccdcf07c5c557fc70e3ffd79c734 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 4.4E-19 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y11_41201 3e88ccdcf07c5c557fc70e3ffd79c734 132 SUPERFAMILY SSF54593 4 129 2.82E-30 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y11_41201 3e88ccdcf07c5c557fc70e3ffd79c734 132 Gene3D G3DSA:3.10.180.10 9 128 3.5E-30 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y11_02161 7c539d0c2f7dd72f249d015171871cc0 225 SUPERFAMILY SSF56770 43 190 5.1E-64 T 13-10-2018 Y11_02161 7c539d0c2f7dd72f249d015171871cc0 225 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 28 182 41.895 T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02161 7c539d0c2f7dd72f249d015171871cc0 225 Gene3D G3DSA:3.40.50.12280 26 192 6.8E-70 T 13-10-2018 Y11_02161 7c539d0c2f7dd72f249d015171871cc0 225 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 69 175 5.2E-22 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02161 7c539d0c2f7dd72f249d015171871cc0 225 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 46 183 9.4E-69 T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02161 7c539d0c2f7dd72f249d015171871cc0 225 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 149 165 - T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17781 c462c0e57afa28a79ec59d2deb6bd7be 284 SMART SM00450 156 276 1.5E-17 T 13-10-2018 IPR001763 Rhodanese-like domain Y11_17781 c462c0e57afa28a79ec59d2deb6bd7be 284 SMART SM00450 7 133 1.1E-24 T 13-10-2018 IPR001763 Rhodanese-like domain Y11_17781 c462c0e57afa28a79ec59d2deb6bd7be 284 ProSitePatterns PS00683 Rhodanese C-terminal signature. 260 270 - T 13-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Y11_17781 c462c0e57afa28a79ec59d2deb6bd7be 284 Gene3D G3DSA:3.40.250.10 151 276 2.7E-38 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Y11_17781 c462c0e57afa28a79ec59d2deb6bd7be 284 Gene3D G3DSA:3.40.250.10 1 150 4.2E-47 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Y11_17781 c462c0e57afa28a79ec59d2deb6bd7be 284 SUPERFAMILY SSF52821 159 279 6.94E-32 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Y11_17781 c462c0e57afa28a79ec59d2deb6bd7be 284 ProSitePatterns PS00380 Rhodanese signature 1. 43 54 - T 13-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Y11_17781 c462c0e57afa28a79ec59d2deb6bd7be 284 SUPERFAMILY SSF52821 1 152 5.76E-44 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Y11_17781 c462c0e57afa28a79ec59d2deb6bd7be 284 Pfam PF00581 Rhodanese-like domain 160 271 8.1E-11 T 13-10-2018 IPR001763 Rhodanese-like domain Y11_17781 c462c0e57afa28a79ec59d2deb6bd7be 284 Pfam PF00581 Rhodanese-like domain 8 129 3.0E-18 T 13-10-2018 IPR001763 Rhodanese-like domain Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.143 T 13-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.6E-17 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 Gene3D G3DSA:1.20.58.1480 120 245 2.5E-47 T 13-10-2018 Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 2.2E-44 T 13-10-2018 IPR003111 Lon, substrate-binding domain Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 6.8E-96 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 SMART SM00464 10 202 7.1E-84 T 13-10-2018 IPR003111 Lon, substrate-binding domain Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 Gene3D G3DSA:3.40.50.300 314 490 7.1E-61 T 13-10-2018 Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 5.0E-56 T 13-10-2018 Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 5.0E-56 T 13-10-2018 Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 5.0E-56 T 13-10-2018 Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 5.0E-56 T 13-10-2018 Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 5.0E-56 T 13-10-2018 Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 Gene3D G3DSA:3.30.230.10 585 772 1.5E-86 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 SUPERFAMILY SSF54211 595 771 1.25E-58 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 SMART SM00382 348 492 2.8E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 PIRSF PIRSF001174 1 775 0.0 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 Gene3D G3DSA:1.10.8.60 491 584 4.1E-33 T 13-10-2018 Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 13-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 Gene3D G3DSA:2.30.130.40 1 118 4.2E-38 T 13-10-2018 Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 SUPERFAMILY SSF52540 313 586 1.66E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_20521 875dd72b3f30b180faf1ff37f14d13b3 784 SUPERFAMILY SSF88697 10 201 1.22E-52 T 13-10-2018 IPR015947 PUA-like superfamily Y11_14311 298c9744aef447aa112f2719f7b0b59e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.4E-23 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Y11_14311 298c9744aef447aa112f2719f7b0b59e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.4E-23 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Y11_14311 298c9744aef447aa112f2719f7b0b59e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.4E-23 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Y11_14311 298c9744aef447aa112f2719f7b0b59e 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 9.7E-30 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Y11_14311 298c9744aef447aa112f2719f7b0b59e 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 4.5E-33 T 13-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 Y11_14311 298c9744aef447aa112f2719f7b0b59e 89 PIRSF PIRSF004669 1 89 1.7E-33 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Y11_42781 b8347d67916c4024333b1f0f162cd76c 431 Hamap MF_00504 Peptidase B [pepB]. 4 428 68.755 T 13-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 Y11_42781 b8347d67916c4024333b1f0f162cd76c 431 SUPERFAMILY SSF53187 108 427 1.76E-104 T 13-10-2018 Y11_42781 b8347d67916c4024333b1f0f162cd76c 431 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 110 422 5.2E-107 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Y11_42781 b8347d67916c4024333b1f0f162cd76c 431 Pfam PF12404 Peptidase 6 82 5.0E-35 T 13-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 Y11_42781 b8347d67916c4024333b1f0f162cd76c 431 Gene3D G3DSA:3.40.630.10 94 431 1.8E-108 T 13-10-2018 Y11_42781 b8347d67916c4024333b1f0f162cd76c 431 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 1.5E-47 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Y11_42781 b8347d67916c4024333b1f0f162cd76c 431 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 1.5E-47 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Y11_42781 b8347d67916c4024333b1f0f162cd76c 431 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 1.5E-47 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Y11_42781 b8347d67916c4024333b1f0f162cd76c 431 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 1.5E-47 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Y11_42781 b8347d67916c4024333b1f0f162cd76c 431 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 1.5E-47 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Y11_42781 b8347d67916c4024333b1f0f162cd76c 431 PIRSF PIRSF036388 2 431 1.5E-237 T 13-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 Y11_42781 b8347d67916c4024333b1f0f162cd76c 431 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Y11_29601 240b58ac73ef0a4c3f44b77d79eee8d0 488 Gene3D G3DSA:3.40.50.410 315 463 8.5E-6 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Y11_29601 240b58ac73ef0a4c3f44b77d79eee8d0 488 SMART SM00327 324 488 9.3E-8 T 13-10-2018 IPR002035 von Willebrand factor, type A Y11_29601 240b58ac73ef0a4c3f44b77d79eee8d0 488 Hamap MF_01626 Protein ViaA [viaA]. 1 488 58.348 T 13-10-2018 IPR023481 Uncharacterised protein family ViaA Y11_29601 240b58ac73ef0a4c3f44b77d79eee8d0 488 Pfam PF05762 VWA domain containing CoxE-like protein 309 441 8.4E-9 T 13-10-2018 IPR008912 Uncharacterised protein family CoxE-like Y11_29601 240b58ac73ef0a4c3f44b77d79eee8d0 488 SUPERFAMILY SSF53300 323 465 2.04E-18 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Y11_08171 8209c817a9227ea5e168dab0444136aa 158 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 19 154 42.808 T 13-10-2018 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837 Y11_08171 8209c817a9227ea5e168dab0444136aa 158 SUPERFAMILY SSF54637 38 156 5.75E-32 T 13-10-2018 IPR029069 HotDog domain superfamily Y11_08171 8209c817a9227ea5e168dab0444136aa 158 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 38 153 7.6E-47 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 Y11_08171 8209c817a9227ea5e168dab0444136aa 158 Pfam PF03061 Thioesterase superfamily 68 145 1.8E-15 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Y11_08171 8209c817a9227ea5e168dab0444136aa 158 Gene3D G3DSA:3.10.129.10 17 157 2.3E-59 T 13-10-2018 Y11_01471 13dedd6d0b85b8e53625d64589c8ecbc 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 303 4.1E-100 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Y11_01471 13dedd6d0b85b8e53625d64589c8ecbc 310 Gene3D G3DSA:3.40.50.150 109 276 2.8E-44 T 13-10-2018 Y11_01471 13dedd6d0b85b8e53625d64589c8ecbc 310 PIRSF PIRSF037167 2 307 1.2E-147 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Y11_01471 13dedd6d0b85b8e53625d64589c8ecbc 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.038 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Y11_01471 13dedd6d0b85b8e53625d64589c8ecbc 310 Pfam PF05175 Methyltransferase small domain 132 215 9.4E-16 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Y11_01471 13dedd6d0b85b8e53625d64589c8ecbc 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 3.2E-137 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Y11_01471 13dedd6d0b85b8e53625d64589c8ecbc 310 SUPERFAMILY SSF53335 15 293 5.11E-49 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_01471 13dedd6d0b85b8e53625d64589c8ecbc 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Y11_12591 b5e4f74f1d542aa71419b909e46594c6 315 Gene3D G3DSA:3.40.50.2020 148 290 7.9E-137 T 13-10-2018 Y11_12591 b5e4f74f1d542aa71419b909e46594c6 315 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.803 T 13-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Y11_12591 b5e4f74f1d542aa71419b909e46594c6 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.1E-30 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Y11_12591 b5e4f74f1d542aa71419b909e46594c6 315 Gene3D G3DSA:3.40.50.2020 7 302 7.9E-137 T 13-10-2018 Y11_12591 b5e4f74f1d542aa71419b909e46594c6 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.9E-49 T 13-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Y11_12591 b5e4f74f1d542aa71419b909e46594c6 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 4.4E-127 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Y11_12591 b5e4f74f1d542aa71419b909e46594c6 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 13-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Y11_12591 b5e4f74f1d542aa71419b909e46594c6 315 SMART SM01400 4 121 5.7E-76 T 13-10-2018 Y11_12591 b5e4f74f1d542aa71419b909e46594c6 315 SUPERFAMILY SSF53271 69 306 5.0E-67 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Y11_39171 c6424b0bd3cc7e2f229e943d331a0584 250 Gene3D G3DSA:2.60.440.10 9 250 1.0E-82 T 13-10-2018 IPR027462 Z ring-associated protein D, C-terminal Y11_39171 c6424b0bd3cc7e2f229e943d331a0584 250 Gene3D G3DSA:1.10.3900.10 16 182 1.0E-82 T 13-10-2018 Y11_39171 c6424b0bd3cc7e2f229e943d331a0584 250 Hamap MF_01092 Cell division protein ZapD [zapD]. 7 250 32.583 T 13-10-2018 IPR009777 Cell division protein ZapD Y11_39171 c6424b0bd3cc7e2f229e943d331a0584 250 Pfam PF07072 Cell division protein 22 228 9.4E-77 T 13-10-2018 IPR009777 Cell division protein ZapD Y11_39171 c6424b0bd3cc7e2f229e943d331a0584 250 SUPERFAMILY SSF160950 6 250 1.02E-90 T 13-10-2018 IPR036268 ZapD domain superfamily Y11_34501 5e74f4a34bf6943387b5b00cec621d6b 319 Pfam PF03547 Membrane transport protein 17 155 1.3E-10 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Y11_34501 5e74f4a34bf6943387b5b00cec621d6b 319 Pfam PF03547 Membrane transport protein 169 310 2.9E-15 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Y11_19651 5fd1b08ab19daa0a7a5bbd1f94276bf9 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 1.2E-39 T 13-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Y11_19651 5fd1b08ab19daa0a7a5bbd1f94276bf9 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 1.6E-68 T 13-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Y11_19651 5fd1b08ab19daa0a7a5bbd1f94276bf9 288 Gene3D G3DSA:3.40.50.720 6 259 3.7E-107 T 13-10-2018 Y11_19651 5fd1b08ab19daa0a7a5bbd1f94276bf9 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Y11_19651 5fd1b08ab19daa0a7a5bbd1f94276bf9 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Y11_19651 5fd1b08ab19daa0a7a5bbd1f94276bf9 288 SUPERFAMILY SSF51735 123 286 1.22E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_19651 5fd1b08ab19daa0a7a5bbd1f94276bf9 288 Gene3D G3DSA:3.40.50.10860 8 276 3.7E-107 T 13-10-2018 Y11_19651 5fd1b08ab19daa0a7a5bbd1f94276bf9 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.02 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Y11_19651 5fd1b08ab19daa0a7a5bbd1f94276bf9 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 6.5E-88 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Y11_19651 5fd1b08ab19daa0a7a5bbd1f94276bf9 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 6.5E-88 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Y11_19651 5fd1b08ab19daa0a7a5bbd1f94276bf9 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 6.5E-88 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Y11_19651 5fd1b08ab19daa0a7a5bbd1f94276bf9 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 6.5E-88 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Y11_19651 5fd1b08ab19daa0a7a5bbd1f94276bf9 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 6.5E-88 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Y11_19651 5fd1b08ab19daa0a7a5bbd1f94276bf9 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 6.5E-88 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Y11_19651 5fd1b08ab19daa0a7a5bbd1f94276bf9 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 6.5E-88 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Y11_19651 5fd1b08ab19daa0a7a5bbd1f94276bf9 288 SUPERFAMILY SSF53223 1 122 1.44E-40 T 13-10-2018 Y11_02241 3061c45f6e1df194d1cc1d29f2c031c8 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.962 T 13-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 Y11_02241 3061c45f6e1df194d1cc1d29f2c031c8 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 8.3E-22 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 SUPERFAMILY SSF53850 231 461 2.86E-38 T 13-10-2018 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 247 459 6.6E-28 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 SMART SM00448 902 1016 2.5E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 Gene3D G3DSA:3.40.50.2300 889 1026 1.5E-34 T 13-10-2018 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 Gene3D G3DSA:1.20.120.160 1059 1179 1.4E-8 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 Gene3D G3DSA:3.30.565.10 712 880 8.1E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 SMART SM00062 239 463 7.0E-20 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 SMART SM00062 1 215 6.0E-33 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 SUPERFAMILY SSF47384 634 714 9.42E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 SUPERFAMILY SSF47226 999 1152 5.36E-13 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 SMART SM00387 760 876 3.0E-33 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 Pfam PF01627 Hpt domain 1075 1147 1.3E-5 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 Gene3D G3DSA:1.10.287.130 625 711 1.1E-17 T 13-10-2018 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 SUPERFAMILY SSF53850 3 214 1.09E-20 T 13-10-2018 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 SMART SM00388 649 713 3.1E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 763 875 9.9E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 Gene3D G3DSA:3.40.190.10 326 422 6.7E-51 T 13-10-2018 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 SUPERFAMILY SSF55874 702 876 4.32E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 Gene3D G3DSA:3.40.190.10 2 211 1.7E-35 T 13-10-2018 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 Pfam PF00072 Response regulator receiver domain 904 1015 8.3E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 3 213 1.1E-13 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 Gene3D G3DSA:3.40.190.10 82 174 1.7E-35 T 13-10-2018 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 SUPERFAMILY SSF52172 900 1019 2.13E-34 T 13-10-2018 IPR011006 CheY-like superfamily Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 Gene3D G3DSA:3.40.190.10 230 459 6.7E-51 T 13-10-2018 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 PRINTS PR00344 Bacterial sensor protein C-terminal signature 819 829 1.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 PRINTS PR00344 Bacterial sensor protein C-terminal signature 836 854 1.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 PRINTS PR00344 Bacterial sensor protein C-terminal signature 860 873 1.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 PRINTS PR00344 Bacterial sensor protein C-terminal signature 801 815 1.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_15141 1fb76f9cc7452dca142802ab28fe411f 1185 Pfam PF00512 His Kinase A (phospho-acceptor) domain 650 713 1.5E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_23521 4cff724d34e3c3b334443cf515265759 320 SUPERFAMILY SSF56349 4 315 4.71E-34 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Y11_23521 4cff724d34e3c3b334443cf515265759 320 Gene3D G3DSA:1.10.150.130 2 102 6.6E-10 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Y11_23521 4cff724d34e3c3b334443cf515265759 320 Pfam PF00589 Phage integrase family 153 306 6.6E-21 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Y11_23521 4cff724d34e3c3b334443cf515265759 320 Gene3D G3DSA:1.10.443.10 134 319 3.7E-27 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 Gene3D G3DSA:1.10.1420.10 269 559 1.1E-105 T 13-10-2018 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 SUPERFAMILY SSF52540 567 798 5.91E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 Pfam PF05190 MutS family domain IV 428 517 2.0E-28 T 13-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 Gene3D G3DSA:3.40.50.300 571 848 1.2E-101 T 13-10-2018 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 848 0.0 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 Pfam PF01624 MutS domain I 11 122 1.9E-40 T 13-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 Pfam PF05188 MutS domain II 131 256 8.6E-34 T 13-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 Gene3D G3DSA:3.40.1170.10 2 124 3.5E-51 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 PIRSF PIRSF037677 3 831 4.3E-152 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 Gene3D G3DSA:1.10.1420.10 387 503 1.1E-105 T 13-10-2018 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 SUPERFAMILY SSF48334 270 564 6.93E-91 T 13-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 Pfam PF00488 MutS domain V 610 797 1.4E-88 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 SMART SM00534 607 794 3.6E-123 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 843 25.277 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 SUPERFAMILY SSF53150 117 269 2.75E-42 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 SUPERFAMILY SSF55271 5 116 4.19E-42 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 SMART SM00533 286 591 3.3E-106 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 Pfam PF05192 MutS domain III 272 559 2.5E-39 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Y11_22731 1a8b60602b9accf221b31cadff61c9cd 851 Gene3D G3DSA:3.30.420.110 130 265 1.9E-38 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Y11_10951 170c58e1c38afe5dac64c82a7d57121c 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 310 1.0E-18 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Y11_10951 170c58e1c38afe5dac64c82a7d57121c 333 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_10951 170c58e1c38afe5dac64c82a7d57121c 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 2.5E-29 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Y11_10951 170c58e1c38afe5dac64c82a7d57121c 333 Gene3D G3DSA:3.40.50.300 8 332 4.4E-98 T 13-10-2018 Y11_10951 170c58e1c38afe5dac64c82a7d57121c 333 SUPERFAMILY SSF52540 22 263 2.06E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_10951 170c58e1c38afe5dac64c82a7d57121c 333 SMART SM00382 48 241 4.0E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_10951 170c58e1c38afe5dac64c82a7d57121c 333 Pfam PF00005 ABC transporter 40 191 2.6E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_11021 b4bb536a00551e50b8be4169bdcf1717 891 Gene3D G3DSA:3.40.309.10 218 404 7.2E-182 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Y11_11021 b4bb536a00551e50b8be4169bdcf1717 891 Gene3D G3DSA:1.20.1090.10 645 865 1.3E-61 T 13-10-2018 Y11_11021 b4bb536a00551e50b8be4169bdcf1717 891 PIRSF PIRSF000111 1 866 0.0 T 13-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 Y11_11021 b4bb536a00551e50b8be4169bdcf1717 891 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Y11_11021 b4bb536a00551e50b8be4169bdcf1717 891 SUPERFAMILY SSF53720 6 453 6.54E-84 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Y11_11021 b4bb536a00551e50b8be4169bdcf1717 891 Pfam PF00171 Aldehyde dehydrogenase family 5 399 4.6E-28 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Y11_11021 b4bb536a00551e50b8be4169bdcf1717 891 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 5.5E-114 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Y11_11021 b4bb536a00551e50b8be4169bdcf1717 891 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Y11_11021 b4bb536a00551e50b8be4169bdcf1717 891 SUPERFAMILY SSF56796 451 864 6.02E-119 T 13-10-2018 Y11_11021 b4bb536a00551e50b8be4169bdcf1717 891 Gene3D G3DSA:3.40.605.10 10 444 7.2E-182 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Y11_11021 b4bb536a00551e50b8be4169bdcf1717 891 Gene3D G3DSA:3.40.50.1970 450 643 3.6E-58 T 13-10-2018 Y11_10981 2d6b3b0c52efe944039faece6b29d25f 306 Gene3D G3DSA:1.10.3720.10 85 301 3.9E-20 T 13-10-2018 IPR035906 MetI-like superfamily Y11_10981 2d6b3b0c52efe944039faece6b29d25f 306 SUPERFAMILY SSF161098 92 291 3.6E-20 T 13-10-2018 IPR035906 MetI-like superfamily Y11_10981 2d6b3b0c52efe944039faece6b29d25f 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 3.3E-38 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_21421 4768d50637e542b16d0517c4cb8ac0be 198 PIRSF PIRSF006102 1 198 8.9E-65 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Y11_21421 4768d50637e542b16d0517c4cb8ac0be 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 1.3E-104 T 13-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 Y11_21421 4768d50637e542b16d0517c4cb8ac0be 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 6.9E-59 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Y11_21421 4768d50637e542b16d0517c4cb8ac0be 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.601 T 13-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 Y11_33021 c3585cd03e547f9676f7ec2390414c9f 177 Gene3D G3DSA:3.90.930.12 1 82 1.7E-30 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33021 c3585cd03e547f9676f7ec2390414c9f 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 13-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_33021 c3585cd03e547f9676f7ec2390414c9f 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.3E-73 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Y11_33021 c3585cd03e547f9676f7ec2390414c9f 177 Pfam PF00347 Ribosomal protein L6 90 164 6.6E-19 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33021 c3585cd03e547f9676f7ec2390414c9f 177 Pfam PF00347 Ribosomal protein L6 11 82 2.8E-19 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33021 c3585cd03e547f9676f7ec2390414c9f 177 SUPERFAMILY SSF56053 83 177 9.08E-36 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33021 c3585cd03e547f9676f7ec2390414c9f 177 SUPERFAMILY SSF56053 1 82 2.09E-23 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33021 c3585cd03e547f9676f7ec2390414c9f 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.0E-33 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Y11_33021 c3585cd03e547f9676f7ec2390414c9f 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.0E-33 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Y11_33021 c3585cd03e547f9676f7ec2390414c9f 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.0E-33 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Y11_33021 c3585cd03e547f9676f7ec2390414c9f 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.625 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Y11_33021 c3585cd03e547f9676f7ec2390414c9f 177 PIRSF PIRSF002162 1 177 5.0E-44 T 13-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33021 c3585cd03e547f9676f7ec2390414c9f 177 Gene3D G3DSA:3.90.930.12 83 177 9.7E-40 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_03771 935ce9c5c11b4c20d075e1b59f993b11 259 SUPERFAMILY SSF52540 20 250 1.39E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_03771 935ce9c5c11b4c20d075e1b59f993b11 259 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_03771 935ce9c5c11b4c20d075e1b59f993b11 259 SMART SM00382 44 235 1.3E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_03771 935ce9c5c11b4c20d075e1b59f993b11 259 PIRSF PIRSF039085 17 259 2.3E-83 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Y11_03771 935ce9c5c11b4c20d075e1b59f993b11 259 Gene3D G3DSA:3.40.50.300 16 258 1.3E-69 T 13-10-2018 Y11_03771 935ce9c5c11b4c20d075e1b59f993b11 259 Pfam PF00005 ABC transporter 37 187 7.0E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_01251 03d0dffd4300023f50aa96d866037b03 103 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 4 95 2.2E-35 T 13-10-2018 IPR024476 Protein of unknown function DUF3861 Y11_01251 03d0dffd4300023f50aa96d866037b03 103 Gene3D G3DSA:1.10.225.20 1 96 1.1E-30 T 13-10-2018 Y11_37341 af2677d937b0c703d0cd2f73cd57c34e 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Y11_37341 af2677d937b0c703d0cd2f73cd57c34e 503 SUPERFAMILY SSF52949 1 184 8.24E-52 T 13-10-2018 Y11_37341 af2677d937b0c703d0cd2f73cd57c34e 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 3.1E-122 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Y11_37341 af2677d937b0c703d0cd2f73cd57c34e 503 Gene3D G3DSA:3.40.630.10 181 498 5.6E-141 T 13-10-2018 Y11_37341 af2677d937b0c703d0cd2f73cd57c34e 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 2.0E-33 T 13-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Y11_37341 af2677d937b0c703d0cd2f73cd57c34e 503 SUPERFAMILY SSF53187 180 496 1.54E-124 T 13-10-2018 Y11_37341 af2677d937b0c703d0cd2f73cd57c34e 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 3.3E-54 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Y11_37341 af2677d937b0c703d0cd2f73cd57c34e 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 3.3E-54 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Y11_37341 af2677d937b0c703d0cd2f73cd57c34e 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 3.3E-54 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Y11_37341 af2677d937b0c703d0cd2f73cd57c34e 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 3.3E-54 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Y11_37341 af2677d937b0c703d0cd2f73cd57c34e 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 3.3E-54 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Y11_37341 af2677d937b0c703d0cd2f73cd57c34e 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.193 T 13-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 Y11_37341 af2677d937b0c703d0cd2f73cd57c34e 503 Gene3D G3DSA:3.40.220.10 1 159 3.3E-59 T 13-10-2018 Y11_18631 1cf9e6fda426e3dafd2b613ba329bb40 115 PIRSF PIRSF000169 1 115 2.4E-41 T 13-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 Y11_18631 1cf9e6fda426e3dafd2b613ba329bb40 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 7.5E-36 T 13-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 Y11_18631 1cf9e6fda426e3dafd2b613ba329bb40 115 Gene3D G3DSA:1.20.1300.10 1 115 2.4E-30 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_18631 1cf9e6fda426e3dafd2b613ba329bb40 115 SUPERFAMILY SSF81343 5 114 8.5E-29 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 Gene3D G3DSA:3.40.50.1000 335 683 1.1E-290 T 13-10-2018 IPR023214 HAD superfamily Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 Pfam PF00122 E1-E2 ATPase 125 318 1.4E-54 T 13-10-2018 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 SUPERFAMILY SSF81660 345 541 2.03E-46 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 606 728 1.7E-35 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 97 359 5.4E-41 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 SUPERFAMILY SSF81653 127 237 1.18E-30 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 SUPERFAMILY SSF81665 17 898 2.62E-119 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 SMART SM00831 17 90 1.3E-35 T 13-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 SUPERFAMILY SSF56784 336 741 3.5E-61 T 13-10-2018 IPR036412 HAD-like superfamily Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 Pfam PF00689 Cation transporting ATPase, C-terminus 723 894 2.1E-42 T 13-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 610 626 2.7E-18 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 638 654 2.7E-18 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 670 695 2.7E-18 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 495 513 2.7E-18 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 Pfam PF00690 Cation transporter/ATPase, N-terminus 18 84 4.5E-22 T 13-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 Pfam PF00702 haloacid dehalogenase-like hydrolase 334 652 2.1E-23 T 13-10-2018 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 Gene3D G3DSA:1.20.1110.10 68 893 1.1E-290 T 13-10-2018 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 338 352 1.3E-40 T 13-10-2018 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 537 548 1.3E-40 T 13-10-2018 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 175 189 1.3E-40 T 13-10-2018 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 662 674 1.3E-40 T 13-10-2018 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 638 657 1.3E-40 T 13-10-2018 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 559 569 1.3E-40 T 13-10-2018 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 Gene3D G3DSA:2.70.150.10 32 240 1.1E-290 T 13-10-2018 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 340 346 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Y11_38211 d2b0d495063cb361901a25948aaa8b07 903 Gene3D G3DSA:3.40.1110.10 348 544 1.1E-290 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Y11_41281 dc74e920c81c2f994a2ed9454f1affa4 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 377 3.1E-26 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Y11_41281 dc74e920c81c2f994a2ed9454f1affa4 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 42.978 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Y11_41281 dc74e920c81c2f994a2ed9454f1affa4 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 4.2E-49 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_41281 dc74e920c81c2f994a2ed9454f1affa4 572 SUPERFAMILY SSF55826 218 390 9.29E-33 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Y11_41281 dc74e920c81c2f994a2ed9454f1affa4 572 Gene3D G3DSA:3.30.930.10 11 465 4.4E-243 T 13-10-2018 Y11_41281 dc74e920c81c2f994a2ed9454f1affa4 572 Gene3D G3DSA:3.90.960.10 240 389 4.4E-243 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Y11_41281 dc74e920c81c2f994a2ed9454f1affa4 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 1.1E-271 T 13-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Y11_41281 dc74e920c81c2f994a2ed9454f1affa4 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.9E-19 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Y11_41281 dc74e920c81c2f994a2ed9454f1affa4 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.9E-19 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Y11_41281 dc74e920c81c2f994a2ed9454f1affa4 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.9E-19 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Y11_41281 dc74e920c81c2f994a2ed9454f1affa4 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.9E-19 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Y11_41281 dc74e920c81c2f994a2ed9454f1affa4 572 SUPERFAMILY SSF52954 463 571 6.64E-33 T 13-10-2018 Y11_41281 dc74e920c81c2f994a2ed9454f1affa4 572 PIRSF PIRSF001535 1 572 4.8E-276 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Y11_41281 dc74e920c81c2f994a2ed9454f1affa4 572 Pfam PF03129 Anticodon binding domain 475 568 5.4E-21 T 13-10-2018 IPR004154 Anticodon-binding Y11_41281 dc74e920c81c2f994a2ed9454f1affa4 572 Gene3D G3DSA:3.40.50.800 4 554 4.4E-243 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily Y11_41281 dc74e920c81c2f994a2ed9454f1affa4 572 SUPERFAMILY SSF55681 10 478 1.58E-107 T 13-10-2018 Y11_27271 4fdf3822a26e15b5cc1c7b1bc85db72c 523 SUPERFAMILY SSF103190 77 185 1.84E-9 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Y11_27271 4fdf3822a26e15b5cc1c7b1bc85db72c 523 Pfam PF02743 Cache domain 50 271 9.1E-19 T 13-10-2018 IPR033479 Double Cache domain 1 Y11_27271 4fdf3822a26e15b5cc1c7b1bc85db72c 523 SMART SM00267 359 523 4.6E-55 T 13-10-2018 IPR000160 GGDEF domain Y11_27271 4fdf3822a26e15b5cc1c7b1bc85db72c 523 Gene3D G3DSA:3.30.70.270 357 523 8.2E-49 T 13-10-2018 Y11_27271 4fdf3822a26e15b5cc1c7b1bc85db72c 523 Gene3D G3DSA:3.30.450.20 41 184 1.2E-11 T 13-10-2018 Y11_27271 4fdf3822a26e15b5cc1c7b1bc85db72c 523 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 519 5.7E-42 T 13-10-2018 IPR000160 GGDEF domain Y11_27271 4fdf3822a26e15b5cc1c7b1bc85db72c 523 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 367 522 3.7E-45 T 13-10-2018 IPR000160 GGDEF domain Y11_27271 4fdf3822a26e15b5cc1c7b1bc85db72c 523 SUPERFAMILY SSF55073 375 522 7.61E-42 T 13-10-2018 IPR029787 Nucleotide cyclase Y11_27271 4fdf3822a26e15b5cc1c7b1bc85db72c 523 SUPERFAMILY SSF103190 190 271 2.0E-10 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Y11_35891 aa20eb5b724833bf4906c2e5a80d123b 550 Gene3D G3DSA:3.30.260.10 136 410 1.8E-237 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Y11_35891 aa20eb5b724833bf4906c2e5a80d123b 550 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 4.4E-253 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Y11_35891 aa20eb5b724833bf4906c2e5a80d123b 550 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 13-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Y11_35891 aa20eb5b724833bf4906c2e5a80d123b 550 Gene3D G3DSA:3.50.7.10 192 372 1.8E-237 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily Y11_35891 aa20eb5b724833bf4906c2e5a80d123b 550 Hamap MF_00600 60 kDa chaperonin [groL]. 2 549 41.425 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Y11_35891 aa20eb5b724833bf4906c2e5a80d123b 550 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Y11_35891 aa20eb5b724833bf4906c2e5a80d123b 550 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Y11_35891 aa20eb5b724833bf4906c2e5a80d123b 550 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Y11_35891 aa20eb5b724833bf4906c2e5a80d123b 550 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Y11_35891 aa20eb5b724833bf4906c2e5a80d123b 550 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Y11_35891 aa20eb5b724833bf4906c2e5a80d123b 550 Gene3D G3DSA:1.10.560.10 8 523 1.8E-237 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily Y11_35891 aa20eb5b724833bf4906c2e5a80d123b 550 SUPERFAMILY SSF48592 7 523 9.16E-76 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily Y11_35891 aa20eb5b724833bf4906c2e5a80d123b 550 SUPERFAMILY SSF54849 137 203 5.04E-24 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Y11_35891 aa20eb5b724833bf4906c2e5a80d123b 550 SUPERFAMILY SSF52029 185 376 1.26E-81 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily Y11_35891 aa20eb5b724833bf4906c2e5a80d123b 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 525 2.5E-92 T 13-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Y11_41821 a3146419f9bca7692336c5cdbe6c0346 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 2.9E-43 T 13-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41821 a3146419f9bca7692336c5cdbe6c0346 100 SUPERFAMILY SSF54111 1 99 7.19E-41 T 13-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41821 a3146419f9bca7692336c5cdbe6c0346 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 1.0E-46 T 13-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41821 a3146419f9bca7692336c5cdbe6c0346 100 Gene3D G3DSA:3.30.280.10 1 100 3.8E-43 T 13-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41821 a3146419f9bca7692336c5cdbe6c0346 100 Pfam PF00547 Urease, gamma subunit 1 99 2.6E-42 T 13-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41821 a3146419f9bca7692336c5cdbe6c0346 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 32.942 T 13-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41821 a3146419f9bca7692336c5cdbe6c0346 100 PIRSF PIRSF001223 1 100 4.0E-49 T 13-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41971 5c7d10df244621cbea3c968bdd48c7e3 344 SUPERFAMILY SSF51430 13 330 4.19E-87 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Y11_41971 5c7d10df244621cbea3c968bdd48c7e3 344 Gene3D G3DSA:3.20.20.100 15 344 1.8E-122 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Y11_41971 5c7d10df244621cbea3c968bdd48c7e3 344 Pfam PF00248 Aldo/keto reductase family 28 330 2.4E-74 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain Y11_36481 264f51f51888b5d5a6d316394605e346 337 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 270 282 - T 13-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Y11_36481 264f51f51888b5d5a6d316394605e346 337 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 193 1.5E-77 T 13-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Y11_36481 264f51f51888b5d5a6d316394605e346 337 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 330 41.798 T 13-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Y11_36481 264f51f51888b5d5a6d316394605e346 337 PIRSF PIRSF000904 1 333 1.4E-120 T 13-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Y11_36481 264f51f51888b5d5a6d316394605e346 337 SUPERFAMILY SSF56655 2 327 5.22E-109 T 13-10-2018 Y11_36481 264f51f51888b5d5a6d316394605e346 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 6.9E-71 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Y11_36481 264f51f51888b5d5a6d316394605e346 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 6.9E-71 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Y11_36481 264f51f51888b5d5a6d316394605e346 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 6.9E-71 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Y11_36481 264f51f51888b5d5a6d316394605e346 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 6.9E-71 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Y11_36481 264f51f51888b5d5a6d316394605e346 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 6.9E-71 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Y11_36481 264f51f51888b5d5a6d316394605e346 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 304 329 6.9E-71 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Y11_36481 264f51f51888b5d5a6d316394605e346 337 Gene3D G3DSA:3.30.540.10 1 195 1.8E-71 T 13-10-2018 Y11_36481 264f51f51888b5d5a6d316394605e346 337 Gene3D G3DSA:3.40.190.80 197 334 2.8E-58 T 13-10-2018 Y11_36481 264f51f51888b5d5a6d316394605e346 337 PIRSF PIRSF500210 1 332 2.1E-123 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Y11_41521 8dc1972739fc536b78d9dadf55cc282e 393 SUPERFAMILY SSF161098 179 361 6.93E-43 T 13-10-2018 IPR035906 MetI-like superfamily Y11_41521 8dc1972739fc536b78d9dadf55cc282e 393 Gene3D G3DSA:1.10.3720.10 176 366 7.2E-38 T 13-10-2018 IPR035906 MetI-like superfamily Y11_41521 8dc1972739fc536b78d9dadf55cc282e 393 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 200 365 1.2E-25 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_39681 93ed9dfcd1cbccc55a8c0db751d81a97 473 Pfam PF00654 Voltage gated chloride channel 89 437 7.7E-91 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Y11_39681 93ed9dfcd1cbccc55a8c0db751d81a97 473 SUPERFAMILY SSF81340 25 453 4.97E-110 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Y11_39681 93ed9dfcd1cbccc55a8c0db751d81a97 473 Gene3D G3DSA:1.10.3080.10 31 473 2.8E-154 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Y11_39681 93ed9dfcd1cbccc55a8c0db751d81a97 473 PRINTS PR00762 Chloride channel signature 352 372 5.3E-28 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Y11_39681 93ed9dfcd1cbccc55a8c0db751d81a97 473 PRINTS PR00762 Chloride channel signature 102 119 5.3E-28 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Y11_39681 93ed9dfcd1cbccc55a8c0db751d81a97 473 PRINTS PR00762 Chloride channel signature 405 424 5.3E-28 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Y11_39681 93ed9dfcd1cbccc55a8c0db751d81a97 473 PRINTS PR00762 Chloride channel signature 183 202 5.3E-28 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Y11_39681 93ed9dfcd1cbccc55a8c0db751d81a97 473 PRINTS PR00762 Chloride channel signature 387 403 5.3E-28 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Y11_14921 43b1279a43beca4ba9b6f494e5eb0cf4 263 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 256 2.6E-6 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_14921 43b1279a43beca4ba9b6f494e5eb0cf4 263 Pfam PF01548 Transposase 16 156 2.5E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_01611 1df0b84bf18f3e0ddd76fe5c89079d49 443 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 426 1.0E-109 T 13-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 Y11_01611 1df0b84bf18f3e0ddd76fe5c89079d49 443 Pfam PF02378 Phosphotransferase system, EIIC 33 352 9.1E-49 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Y11_01611 1df0b84bf18f3e0ddd76fe5c89079d49 443 PIRSF PIRSF006351 5 434 5.3E-134 T 13-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 Y11_07031 8337fee3b19e8b8205d409cf81fadd8a 235 Gene3D G3DSA:3.40.630.30 15 234 3.1E-56 T 13-10-2018 Y11_07031 8337fee3b19e8b8205d409cf81fadd8a 235 Pfam PF13302 Acetyltransferase (GNAT) domain 53 174 1.1E-13 T 13-10-2018 IPR000182 GNAT domain Y11_07031 8337fee3b19e8b8205d409cf81fadd8a 235 SUPERFAMILY SSF55729 30 198 2.44E-34 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_09551 bbf28f55f18e239f822a1826bc328aac 382 SUPERFAMILY SSF111369 233 311 3.66E-7 T 13-10-2018 Y11_09551 bbf28f55f18e239f822a1826bc328aac 382 Gene3D G3DSA:2.40.30.170 296 372 9.3E-13 T 13-10-2018 Y11_09551 bbf28f55f18e239f822a1826bc328aac 382 Pfam PF13437 HlyD family secretion protein 261 369 2.2E-6 T 13-10-2018 Y11_09551 bbf28f55f18e239f822a1826bc328aac 382 Pfam PF13533 Biotin-lipoyl like 63 100 1.0E-6 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Y11_09551 bbf28f55f18e239f822a1826bc328aac 382 SUPERFAMILY SSF111369 137 198 1.22E-5 T 13-10-2018 Y11_09551 bbf28f55f18e239f822a1826bc328aac 382 Gene3D G3DSA:1.10.287.470 232 261 9.3E-13 T 13-10-2018 Y11_09551 bbf28f55f18e239f822a1826bc328aac 382 Gene3D G3DSA:2.40.50.100 262 295 9.3E-13 T 13-10-2018 Y11_09551 bbf28f55f18e239f822a1826bc328aac 382 Gene3D G3DSA:1.10.287.470 88 113 1.1E-7 T 13-10-2018 Y11_09551 bbf28f55f18e239f822a1826bc328aac 382 Gene3D G3DSA:1.10.287.470 132 199 8.1E-11 T 13-10-2018 Y11_09551 bbf28f55f18e239f822a1826bc328aac 382 Gene3D G3DSA:2.40.50.100 53 87 1.1E-7 T 13-10-2018 Y11_09551 bbf28f55f18e239f822a1826bc328aac 382 Gene3D G3DSA:2.40.30.170 43 52 1.1E-7 T 13-10-2018 Y11_33461 0ce080541aadf5a6e038c3ff6a7051d0 514 Gene3D G3DSA:3.40.50.1100 25 327 4.0E-127 T 13-10-2018 Y11_33461 0ce080541aadf5a6e038c3ff6a7051d0 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 1.7E-28 T 13-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Y11_33461 0ce080541aadf5a6e038c3ff6a7051d0 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 1.9E-26 T 13-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Y11_33461 0ce080541aadf5a6e038c3ff6a7051d0 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 3.9E-72 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Y11_33461 0ce080541aadf5a6e038c3ff6a7051d0 514 SUPERFAMILY SSF53686 15 365 2.62E-96 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y11_33461 0ce080541aadf5a6e038c3ff6a7051d0 514 Gene3D G3DSA:3.40.1020.10 338 514 6.3E-74 T 13-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Y11_33461 0ce080541aadf5a6e038c3ff6a7051d0 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Y11_33461 0ce080541aadf5a6e038c3ff6a7051d0 514 Gene3D G3DSA:3.40.50.1100 61 157 4.0E-127 T 13-10-2018 Y11_33461 0ce080541aadf5a6e038c3ff6a7051d0 514 SUPERFAMILY SSF55021 336 423 3.66E-28 T 13-10-2018 Y11_33461 0ce080541aadf5a6e038c3ff6a7051d0 514 SUPERFAMILY SSF55021 420 512 3.66E-26 T 13-10-2018 Y11_33461 0ce080541aadf5a6e038c3ff6a7051d0 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 2.7E-262 T 13-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Y11_39841 0a5eb3c326c082716ff5c4c1cd089a4b 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 33.686 T 13-10-2018 IPR023771 Cell division protein ZapA, eubacteria Y11_39841 0a5eb3c326c082716ff5c4c1cd089a4b 109 Gene3D G3DSA:1.10.20.30 1 47 5.0E-26 T 13-10-2018 Y11_39841 0a5eb3c326c082716ff5c4c1cd089a4b 109 Pfam PF05164 Cell division protein ZapA 6 90 2.6E-19 T 13-10-2018 IPR007838 Cell division protein ZapA-like Y11_39841 0a5eb3c326c082716ff5c4c1cd089a4b 109 Gene3D G3DSA:1.20.5.50 48 102 4.1E-6 T 13-10-2018 Y11_39841 0a5eb3c326c082716ff5c4c1cd089a4b 109 SUPERFAMILY SSF102829 6 94 4.97E-25 T 13-10-2018 IPR036192 Cell division protein ZapA-like superfamily Y11_03681 5d2b38c61e1084cb3d4ed6db2ab7087b 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 269 5.8E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_03681 5d2b38c61e1084cb3d4ed6db2ab7087b 281 SUPERFAMILY SSF161098 8 267 1.5E-52 T 13-10-2018 IPR035906 MetI-like superfamily Y11_03681 5d2b38c61e1084cb3d4ed6db2ab7087b 281 Gene3D G3DSA:1.10.3720.10 15 269 7.5E-46 T 13-10-2018 IPR035906 MetI-like superfamily Y11_32201 4247332b14cdf71cbf14216befec7ba1 304 PIRSF PIRSF005261 4 296 1.5E-75 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Y11_32201 4247332b14cdf71cbf14216befec7ba1 304 Pfam PF01430 Hsp33 protein 15 285 5.4E-87 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Y11_32201 4247332b14cdf71cbf14216befec7ba1 304 Gene3D G3DSA:3.55.30.10 10 188 5.2E-66 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Y11_32201 4247332b14cdf71cbf14216befec7ba1 304 SUPERFAMILY SSF118352 237 293 2.75E-20 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Y11_32201 4247332b14cdf71cbf14216befec7ba1 304 Gene3D G3DSA:3.90.1280.10 238 296 1.4E-23 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Y11_32201 4247332b14cdf71cbf14216befec7ba1 304 Gene3D G3DSA:1.10.287.480 189 237 1.7E-23 T 13-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily Y11_32201 4247332b14cdf71cbf14216befec7ba1 304 SUPERFAMILY SSF64397 14 244 2.09E-74 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Y11_32201 4247332b14cdf71cbf14216befec7ba1 304 Hamap MF_00117 33 kDa chaperonin [hslO]. 14 296 32.924 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Y11_08921 e83ad41efb239ce9cbea3203c435d1d4 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 1.5E-54 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Y11_08921 e83ad41efb239ce9cbea3203c435d1d4 331 SUPERFAMILY SSF51735 103 299 1.14E-55 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_08921 e83ad41efb239ce9cbea3203c435d1d4 331 Gene3D G3DSA:3.40.50.720 103 298 5.7E-140 T 13-10-2018 Y11_08921 e83ad41efb239ce9cbea3203c435d1d4 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Y11_08921 e83ad41efb239ce9cbea3203c435d1d4 331 SUPERFAMILY SSF52283 1 136 2.46E-45 T 13-10-2018 Y11_08921 e83ad41efb239ce9cbea3203c435d1d4 331 Gene3D G3DSA:3.40.50.720 3 318 5.7E-140 T 13-10-2018 Y11_08921 e83ad41efb239ce9cbea3203c435d1d4 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Y11_08921 e83ad41efb239ce9cbea3203c435d1d4 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 10 329 5.3E-33 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Y11_08921 e83ad41efb239ce9cbea3203c435d1d4 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Y11_09521 7c086f71c3ede3e3988cc4b0962058c1 151 SUPERFAMILY SSF54909 73 149 1.34E-12 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Y11_09521 7c086f71c3ede3e3988cc4b0962058c1 151 Gene3D G3DSA:3.30.70.920 64 142 2.1E-13 T 13-10-2018 Y11_09521 7c086f71c3ede3e3988cc4b0962058c1 151 SUPERFAMILY SSF46785 6 61 6.52E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_09521 7c086f71c3ede3e3988cc4b0962058c1 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 7.0E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Y11_09521 7c086f71c3ede3e3988cc4b0962058c1 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 7.0E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Y11_09521 7c086f71c3ede3e3988cc4b0962058c1 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 7.0E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Y11_09521 7c086f71c3ede3e3988cc4b0962058c1 151 Gene3D G3DSA:1.10.10.10 1 61 2.1E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_09521 7c086f71c3ede3e3988cc4b0962058c1 151 SMART SM00344 7 115 1.9E-26 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Y11_09521 7c086f71c3ede3e3988cc4b0962058c1 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 54 4.3E-16 T 13-10-2018 Y11_09521 7c086f71c3ede3e3988cc4b0962058c1 151 Pfam PF01037 Lrp/AsnC ligand binding domain 81 131 9.1E-12 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Y11_32791 a4ac3477558b5ad6b41ee69c45c7290a 121 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 6 121 1.4E-47 T 13-10-2018 IPR017462 Sulphur relay, TusC/DsrF Y11_32791 a4ac3477558b5ad6b41ee69c45c7290a 121 SUPERFAMILY SSF75169 3 121 1.62E-37 T 13-10-2018 IPR027396 DsrEFH-like Y11_32791 a4ac3477558b5ad6b41ee69c45c7290a 121 Pfam PF02635 DsrE/DsrF-like family 6 121 1.9E-23 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Y11_32791 a4ac3477558b5ad6b41ee69c45c7290a 121 Hamap MF_00389 Protein TusC [tusC]. 3 121 36.165 T 13-10-2018 IPR037450 Sulphur relay, TusC Y11_32791 a4ac3477558b5ad6b41ee69c45c7290a 121 Gene3D G3DSA:3.40.1260.10 3 121 3.4E-38 T 13-10-2018 IPR027396 DsrEFH-like Y11_27951 aaa278a52d34d98b40cd6adf0e9045b9 310 SUPERFAMILY SSF53850 89 296 5.58E-45 T 13-10-2018 Y11_27951 aaa278a52d34d98b40cd6adf0e9045b9 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.6E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_27951 aaa278a52d34d98b40cd6adf0e9045b9 310 Gene3D G3DSA:3.40.190.10 91 280 6.1E-76 T 13-10-2018 Y11_27951 aaa278a52d34d98b40cd6adf0e9045b9 310 Pfam PF03466 LysR substrate binding domain 88 293 6.3E-51 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_27951 aaa278a52d34d98b40cd6adf0e9045b9 310 Gene3D G3DSA:3.40.190.10 164 267 6.1E-76 T 13-10-2018 Y11_27951 aaa278a52d34d98b40cd6adf0e9045b9 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_27951 aaa278a52d34d98b40cd6adf0e9045b9 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_27951 aaa278a52d34d98b40cd6adf0e9045b9 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_27951 aaa278a52d34d98b40cd6adf0e9045b9 310 SUPERFAMILY SSF46785 1 110 9.53E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_27951 aaa278a52d34d98b40cd6adf0e9045b9 310 Gene3D G3DSA:1.10.10.10 1 84 2.9E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_03871 19de41e9965cb512855482daef47d411 554 Gene3D G3DSA:3.40.50.300 1 349 8.0E-15 T 13-10-2018 Y11_03871 19de41e9965cb512855482daef47d411 554 SUPERFAMILY SSF52540 1 334 1.35E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_03871 19de41e9965cb512855482daef47d411 554 Pfam PF11398 Protein of unknown function (DUF2813) 1 377 1.2E-162 T 13-10-2018 IPR022602 Protein of unknown function DUF2813 Y11_16141 07cf47ffbe9c4a2542d955e2d99ede9b 271 PRINTS PR00783 Major intrinsic protein family signature 46 70 1.7E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_16141 07cf47ffbe9c4a2542d955e2d99ede9b 271 PRINTS PR00783 Major intrinsic protein family signature 7 26 1.7E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_16141 07cf47ffbe9c4a2542d955e2d99ede9b 271 PRINTS PR00783 Major intrinsic protein family signature 232 252 1.7E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_16141 07cf47ffbe9c4a2542d955e2d99ede9b 271 PRINTS PR00783 Major intrinsic protein family signature 182 204 1.7E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_16141 07cf47ffbe9c4a2542d955e2d99ede9b 271 PRINTS PR00783 Major intrinsic protein family signature 149 167 1.7E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_16141 07cf47ffbe9c4a2542d955e2d99ede9b 271 PRINTS PR00783 Major intrinsic protein family signature 83 102 1.7E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_16141 07cf47ffbe9c4a2542d955e2d99ede9b 271 ProSitePatterns PS00221 MIP family signature. 64 72 - T 13-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 Y11_16141 07cf47ffbe9c4a2542d955e2d99ede9b 271 SUPERFAMILY SSF81338 6 255 7.85E-76 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Y11_16141 07cf47ffbe9c4a2542d955e2d99ede9b 271 Pfam PF00230 Major intrinsic protein 6 249 2.6E-65 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_16141 07cf47ffbe9c4a2542d955e2d99ede9b 271 TIGRFAM TIGR00861 MIP: MIP family channel proteins 11 249 1.1E-66 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_16141 07cf47ffbe9c4a2542d955e2d99ede9b 271 Gene3D G3DSA:1.20.1080.10 1 257 1.6E-98 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Y11_39101 66a2d15348b9d318252c2776330b7d51 383 SUPERFAMILY SSF55307 203 319 2.98E-42 T 13-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Y11_39101 66a2d15348b9d318252c2776330b7d51 383 SMART SM00865 206 324 8.3E-56 T 13-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Y11_39101 66a2d15348b9d318252c2776330b7d51 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 337 8.0E-142 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Y11_39101 66a2d15348b9d318252c2776330b7d51 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 1.4E-51 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Y11_39101 66a2d15348b9d318252c2776330b7d51 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 1.4E-51 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Y11_39101 66a2d15348b9d318252c2776330b7d51 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 1.4E-51 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Y11_39101 66a2d15348b9d318252c2776330b7d51 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 1.4E-51 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Y11_39101 66a2d15348b9d318252c2776330b7d51 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Y11_39101 66a2d15348b9d318252c2776330b7d51 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 1.1E-41 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Y11_39101 66a2d15348b9d318252c2776330b7d51 383 SMART SM00864 12 204 4.3E-112 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Y11_39101 66a2d15348b9d318252c2776330b7d51 383 Gene3D G3DSA:3.40.50.1440 9 316 1.5E-116 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Y11_39101 66a2d15348b9d318252c2776330b7d51 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Y11_39101 66a2d15348b9d318252c2776330b7d51 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 5.7E-37 T 13-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Y11_39101 66a2d15348b9d318252c2776330b7d51 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 343 38.094 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Y11_39101 66a2d15348b9d318252c2776330b7d51 383 SUPERFAMILY SSF52490 12 207 1.3E-69 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Y11_24931 7f53c213bf5d5075e1d04ae5aff3cff0 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 3.3E-165 T 13-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain Y11_24931 7f53c213bf5d5075e1d04ae5aff3cff0 386 Gene3D G3DSA:3.30.1490.330 263 343 4.7E-29 T 13-10-2018 Y11_24931 7f53c213bf5d5075e1d04ae5aff3cff0 386 SUPERFAMILY SSF52440 174 279 1.04E-41 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Y11_24931 7f53c213bf5d5075e1d04ae5aff3cff0 386 SUPERFAMILY SSF56059 1 383 2.47E-93 T 13-10-2018 Y11_04571 6cf08b29070fb592a08cddd6c3dda859 55 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.595 T 13-10-2018 IPR007040 Ribosome modulation factor Y11_04571 6cf08b29070fb592a08cddd6c3dda859 55 Gene3D G3DSA:1.10.10.620 1 55 1.8E-29 T 13-10-2018 IPR023200 Ribosome modulation factor domain superfamily Y11_04571 6cf08b29070fb592a08cddd6c3dda859 55 Pfam PF04957 Ribosome modulation factor 1 52 1.6E-30 T 13-10-2018 IPR007040 Ribosome modulation factor Y11_04571 6cf08b29070fb592a08cddd6c3dda859 55 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 55 4.0E-25 T 13-10-2018 IPR007040 Ribosome modulation factor Y11_03831 0ba74160fd49deacefec299d63438d20 573 Gene3D G3DSA:3.40.50.1220 180 333 3.0E-48 T 13-10-2018 Y11_03831 0ba74160fd49deacefec299d63438d20 573 SUPERFAMILY SSF52467 186 350 5.89E-43 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Y11_03831 0ba74160fd49deacefec299d63438d20 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 526 4.4E-41 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Y11_03831 0ba74160fd49deacefec299d63438d20 573 SUPERFAMILY SSF52518 2 179 6.51E-45 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_03831 0ba74160fd49deacefec299d63438d20 573 Gene3D G3DSA:3.40.50.970 1 178 3.1E-61 T 13-10-2018 Y11_03831 0ba74160fd49deacefec299d63438d20 573 SUPERFAMILY SSF52518 357 558 1.73E-62 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_03831 0ba74160fd49deacefec299d63438d20 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 319 2.7E-31 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Y11_03831 0ba74160fd49deacefec299d63438d20 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Y11_03831 0ba74160fd49deacefec299d63438d20 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 171 6.6E-43 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Y11_03831 0ba74160fd49deacefec299d63438d20 573 Gene3D G3DSA:3.40.50.970 349 573 1.8E-74 T 13-10-2018 Y11_35981 a29f512fc8a463d015fbff055711a500 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 1.2E-31 T 13-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_35981 a29f512fc8a463d015fbff055711a500 244 Gene3D G3DSA:3.10.20.30 3 106 1.3E-34 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Y11_35981 a29f512fc8a463d015fbff055711a500 244 SUPERFAMILY SSF54292 4 106 1.62E-29 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Y11_35981 a29f512fc8a463d015fbff055711a500 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 6.3E-98 T 13-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_35981 a29f512fc8a463d015fbff055711a500 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 8.1E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_35981 a29f512fc8a463d015fbff055711a500 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_35981 a29f512fc8a463d015fbff055711a500 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Y11_35981 a29f512fc8a463d015fbff055711a500 244 Gene3D G3DSA:1.10.1060.10 107 244 6.2E-52 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Y11_35981 a29f512fc8a463d015fbff055711a500 244 SUPERFAMILY SSF46548 107 229 1.43E-31 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 SUPERFAMILY SSF52540 3 219 4.43E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 1.2E-25 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 SUPERFAMILY SSF54980 302 387 1.12E-15 T 13-10-2018 IPR035647 EF-G domain III/V-like Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 1.1E-12 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.6E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.6E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.6E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.6E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.6E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 3.0E-290 T 13-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 Gene3D G3DSA:3.40.50.300 1 198 1.4E-68 T 13-10-2018 Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 SUPERFAMILY SSF54980 398 512 5.76E-26 T 13-10-2018 IPR035647 EF-G domain III/V-like Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 Gene3D G3DSA:2.40.50.250 483 599 1.9E-128 T 13-10-2018 Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 Gene3D G3DSA:3.30.70.870 306 590 1.9E-128 T 13-10-2018 Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 194 3.0E-57 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 Pfam PF00679 Elongation factor G C-terminus 397 476 5.6E-21 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 Gene3D G3DSA:3.30.70.240 389 482 1.9E-128 T 13-10-2018 Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 SUPERFAMILY SSF50447 151 299 9.28E-34 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Y11_29331 eb4dd854299e05e79a29ec6b72e7eb6e 607 Gene3D G3DSA:2.40.30.10 199 299 1.9E-36 T 13-10-2018 Y11_42101 623f87a69d56f7679304f74c944ca958 160 Gene3D G3DSA:2.40.280.10 7 134 9.9E-48 T 13-10-2018 IPR023620 Small protein B Y11_42101 623f87a69d56f7679304f74c944ca958 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 122 3.0E-56 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 Y11_42101 623f87a69d56f7679304f74c944ca958 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 74.997 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 Y11_42101 623f87a69d56f7679304f74c944ca958 160 Pfam PF01668 SmpB protein 14 157 5.5E-59 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 Y11_42101 623f87a69d56f7679304f74c944ca958 160 SUPERFAMILY SSF74982 8 138 1.57E-51 T 13-10-2018 IPR023620 Small protein B Y11_42101 623f87a69d56f7679304f74c944ca958 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 4.3E-55 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 Y11_42101 623f87a69d56f7679304f74c944ca958 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 13-10-2018 IPR020081 SsrA-binding protein, conserved site Y11_03611 07b631dd18d6847672ffee000e4566c7 87 PRINTS PR00160 Glutaredoxin signature 66 79 3.4E-12 T 13-10-2018 IPR014025 Glutaredoxin subgroup Y11_03611 07b631dd18d6847672ffee000e4566c7 87 PRINTS PR00160 Glutaredoxin signature 52 65 3.4E-12 T 13-10-2018 IPR014025 Glutaredoxin subgroup Y11_03611 07b631dd18d6847672ffee000e4566c7 87 PRINTS PR00160 Glutaredoxin signature 3 21 3.4E-12 T 13-10-2018 IPR014025 Glutaredoxin subgroup Y11_03611 07b631dd18d6847672ffee000e4566c7 87 SUPERFAMILY SSF52833 4 82 4.01E-21 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_03611 07b631dd18d6847672ffee000e4566c7 87 Pfam PF00462 Glutaredoxin 4 69 3.0E-17 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Y11_03611 07b631dd18d6847672ffee000e4566c7 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Y11_03611 07b631dd18d6847672ffee000e4566c7 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 86 4.9E-51 T 13-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 Y11_03611 07b631dd18d6847672ffee000e4566c7 87 Gene3D G3DSA:3.40.30.10 3 85 1.4E-25 T 13-10-2018 Y11_00301 8246a76e5ce6e59a1321c74f26b32f6e 157 SUPERFAMILY SSF48452 9 150 1.14E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_00301 8246a76e5ce6e59a1321c74f26b32f6e 157 Gene3D G3DSA:1.25.40.10 1 154 1.5E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_00301 8246a76e5ce6e59a1321c74f26b32f6e 157 Pfam PF12688 Tetratrico peptide repeat 35 153 2.5E-13 T 13-10-2018 Y11_09381 78432ad3896e73869909cc85fbda0604 270 Gene3D G3DSA:3.40.190.80 155 269 2.6E-19 T 13-10-2018 Y11_09381 78432ad3896e73869909cc85fbda0604 270 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 90 103 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Y11_09381 78432ad3896e73869909cc85fbda0604 270 SUPERFAMILY SSF56655 9 266 6.94E-66 T 13-10-2018 Y11_09381 78432ad3896e73869909cc85fbda0604 270 Pfam PF00459 Inositol monophosphatase family 10 253 2.9E-53 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Y11_09381 78432ad3896e73869909cc85fbda0604 270 Gene3D G3DSA:3.30.540.10 2 148 2.2E-43 T 13-10-2018 Y11_09381 78432ad3896e73869909cc85fbda0604 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 48 68 2.8E-29 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Y11_09381 78432ad3896e73869909cc85fbda0604 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 139 162 2.8E-29 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Y11_09381 78432ad3896e73869909cc85fbda0604 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 184 205 2.8E-29 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Y11_09381 78432ad3896e73869909cc85fbda0604 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 2.8E-29 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Y11_09381 78432ad3896e73869909cc85fbda0604 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 70 86 2.8E-29 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Y11_09381 78432ad3896e73869909cc85fbda0604 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 215 239 2.8E-29 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Y11_37231 b6a682846c436f9669e1273ca120f014 349 Gene3D G3DSA:1.10.3720.10 101 345 2.2E-27 T 13-10-2018 IPR035906 MetI-like superfamily Y11_37231 b6a682846c436f9669e1273ca120f014 349 SUPERFAMILY SSF161098 106 337 1.44E-21 T 13-10-2018 IPR035906 MetI-like superfamily Y11_37231 b6a682846c436f9669e1273ca120f014 349 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 349 4.1E-42 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_28171 90b1679f4c1a787d714e98ecbb92a543 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.9E-21 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_28171 90b1679f4c1a787d714e98ecbb92a543 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.9E-21 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_28171 90b1679f4c1a787d714e98ecbb92a543 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.9E-21 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_28171 90b1679f4c1a787d714e98ecbb92a543 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 1.9E-32 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_28171 90b1679f4c1a787d714e98ecbb92a543 71 SUPERFAMILY SSF143800 1 66 3.92E-26 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_28171 90b1679f4c1a787d714e98ecbb92a543 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_28171 90b1679f4c1a787d714e98ecbb92a543 71 Pfam PF01197 Ribosomal protein L31 1 64 1.3E-28 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_28171 90b1679f4c1a787d714e98ecbb92a543 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 29.953 T 13-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_28171 90b1679f4c1a787d714e98ecbb92a543 71 Gene3D G3DSA:2.30.170.50 1 70 3.5E-32 T 13-10-2018 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 Pfam PF00476 DNA polymerase family A 555 929 7.1E-155 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 272 1.1E-30 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 TIGRFAM TIGR00593 pola: DNA polymerase I 9 932 4.8E-288 T 13-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 SUPERFAMILY SSF88723 7 170 2.7E-57 T 13-10-2018 IPR029060 PIN-like domain superfamily Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 SMART SM00475 7 268 3.1E-139 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 SMART SM00482 689 896 1.6E-116 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 658 680 1.7E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 696 1.7E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 879 892 1.7E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 805 1.7E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 726 1.7E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 757 782 1.7E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 733 746 1.7E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 848 864 1.7E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 816 827 1.7E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 Gene3D G3DSA:3.30.420.10 329 545 1.8E-74 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 SMART SM00474 333 520 5.5E-50 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 Pfam PF01612 3'-5' exonuclease 333 520 1.8E-45 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 Gene3D G3DSA:1.20.1060.10 546 661 5.9E-40 T 13-10-2018 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 Gene3D G3DSA:1.10.150.20 174 253 1.6E-97 T 13-10-2018 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 Gene3D G3DSA:3.40.50.1010 9 284 1.6E-97 T 13-10-2018 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 SUPERFAMILY SSF56672 525 932 5.67E-158 T 13-10-2018 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.9E-55 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 SMART SM00279 173 208 1.2E-13 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 ProSitePatterns PS00447 DNA polymerase family A signature. 757 776 - T 13-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 SUPERFAMILY SSF47807 171 291 1.09E-31 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 Gene3D G3DSA:3.30.70.370 667 928 7.4E-116 T 13-10-2018 Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 SUPERFAMILY SSF53098 329 521 1.34E-58 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_29411 e2dc13fd4b7ae6a7add2b28ce9f7c93e 932 Gene3D G3DSA:1.10.150.20 712 855 7.4E-116 T 13-10-2018 Y11_30821 68433bc6585c573207afc2012cd0bc2e 728 SUPERFAMILY SSF51445 32 356 3.75E-40 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_30821 68433bc6585c573207afc2012cd0bc2e 728 Gene3D G3DSA:2.60.40.10 506 596 3.5E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_30821 68433bc6585c573207afc2012cd0bc2e 728 SUPERFAMILY SSF49265 395 496 7.71E-5 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 Y11_30821 68433bc6585c573207afc2012cd0bc2e 728 Pfam PF16990 Carbohydrate binding module (family 35) 610 727 4.8E-30 T 13-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 Y11_30821 68433bc6585c573207afc2012cd0bc2e 728 SUPERFAMILY SSF49785 626 725 8.65E-8 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Y11_30821 68433bc6585c573207afc2012cd0bc2e 728 Gene3D G3DSA:2.60.120.260 612 727 9.8E-22 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Y11_30821 68433bc6585c573207afc2012cd0bc2e 728 Gene3D G3DSA:3.20.20.80 31 392 3.9E-57 T 13-10-2018 Y11_30821 68433bc6585c573207afc2012cd0bc2e 728 Gene3D G3DSA:2.60.40.10 394 502 8.6E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_11051 1362c687572cb6d857671c58bcfe54c3 449 SUPERFAMILY SSF48179 205 301 2.79E-32 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_11051 1362c687572cb6d857671c58bcfe54c3 449 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 298 3.2E-37 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Y11_11051 1362c687572cb6d857671c58bcfe54c3 449 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 322 426 1.5E-30 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Y11_11051 1362c687572cb6d857671c58bcfe54c3 449 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 181 3.6E-63 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Y11_11051 1362c687572cb6d857671c58bcfe54c3 449 Gene3D G3DSA:3.40.50.720 1 204 9.7E-76 T 13-10-2018 Y11_11051 1362c687572cb6d857671c58bcfe54c3 449 Gene3D G3DSA:1.20.5.100 205 235 1.4E-18 T 13-10-2018 Y11_11051 1362c687572cb6d857671c58bcfe54c3 449 PIRSF PIRSF500134 1 444 3.3E-186 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 Y11_11051 1362c687572cb6d857671c58bcfe54c3 449 PIRSF PIRSF000124 1 441 1.1E-146 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Y11_11051 1362c687572cb6d857671c58bcfe54c3 449 SMART SM00984 322 426 1.6E-51 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Y11_11051 1362c687572cb6d857671c58bcfe54c3 449 Gene3D G3DSA:3.40.50.720 237 449 2.5E-76 T 13-10-2018 Y11_11051 1362c687572cb6d857671c58bcfe54c3 449 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 422 1.5E-135 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Y11_11051 1362c687572cb6d857671c58bcfe54c3 449 SUPERFAMILY SSF51735 1 197 7.8E-54 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_11051 1362c687572cb6d857671c58bcfe54c3 449 SUPERFAMILY SSF52413 311 437 4.58E-39 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Y11_p0731 b1a31f2ce8edf8f720a75b0704149f34 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 1.7E-34 T 13-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 Y11_p0731 b1a31f2ce8edf8f720a75b0704149f34 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.7E-26 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Y11_p0731 b1a31f2ce8edf8f720a75b0704149f34 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.7E-26 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Y11_p0731 b1a31f2ce8edf8f720a75b0704149f34 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.7E-26 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Y11_p0731 b1a31f2ce8edf8f720a75b0704149f34 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 4.4E-28 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Y11_p0731 b1a31f2ce8edf8f720a75b0704149f34 88 PIRSF PIRSF004669 1 88 1.5E-27 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Y11_09841 30814f9c0087c00d3e49ed2d4fd7d7ec 426 SUPERFAMILY SSF81340 5 425 2.88E-87 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Y11_09841 30814f9c0087c00d3e49ed2d4fd7d7ec 426 PRINTS PR00762 Chloride channel signature 330 350 1.2E-22 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Y11_09841 30814f9c0087c00d3e49ed2d4fd7d7ec 426 PRINTS PR00762 Chloride channel signature 383 402 1.2E-22 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Y11_09841 30814f9c0087c00d3e49ed2d4fd7d7ec 426 PRINTS PR00762 Chloride channel signature 166 185 1.2E-22 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Y11_09841 30814f9c0087c00d3e49ed2d4fd7d7ec 426 PRINTS PR00762 Chloride channel signature 365 381 1.2E-22 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Y11_09841 30814f9c0087c00d3e49ed2d4fd7d7ec 426 PRINTS PR00762 Chloride channel signature 116 135 1.2E-22 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Y11_09841 30814f9c0087c00d3e49ed2d4fd7d7ec 426 Hamap MF_01203 Voltage-gated ClC-type chloride channel ClcB [clcB]. 16 426 39.016 T 13-10-2018 IPR023790 Chloride channel, voltage-gated, ClcB GO:0006821|GO:0010447 Y11_09841 30814f9c0087c00d3e49ed2d4fd7d7ec 426 Gene3D G3DSA:1.10.3080.10 12 426 7.2E-77 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Y11_09841 30814f9c0087c00d3e49ed2d4fd7d7ec 426 Pfam PF00654 Voltage gated chloride channel 79 416 7.8E-77 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Y11_41471 2ad161d876a7da90607df9aedbfbf61b 251 PIRSF PIRSF005457 1 251 1.8E-88 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Y11_41471 2ad161d876a7da90607df9aedbfbf61b 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 3.5E-103 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Y11_41471 2ad161d876a7da90607df9aedbfbf61b 251 Pfam PF00753 Metallo-beta-lactamase superfamily 13 165 7.3E-16 T 13-10-2018 IPR001279 Metallo-beta-lactamase Y11_41471 2ad161d876a7da90607df9aedbfbf61b 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 2.0E-23 T 13-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Y11_41471 2ad161d876a7da90607df9aedbfbf61b 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 45.118 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Y11_41471 2ad161d876a7da90607df9aedbfbf61b 251 SMART SM00849 11 165 7.8E-39 T 13-10-2018 IPR001279 Metallo-beta-lactamase Y11_41471 2ad161d876a7da90607df9aedbfbf61b 251 Gene3D G3DSA:3.60.15.10 1 251 5.6E-94 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_41471 2ad161d876a7da90607df9aedbfbf61b 251 SUPERFAMILY SSF56281 1 251 3.54E-68 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_00811 29921ee543d161f4e048c15d8424fe5a 186 Pfam PF06042 Nucleotidyltransferase 23 183 1.1E-65 T 13-10-2018 IPR009267 Putative nucleotidyltransferase Y11_38471 09387a5742d9511203ef122fa0a69a97 938 SUPERFAMILY SSF52374 3 647 1.03E-136 T 13-10-2018 Y11_38471 09387a5742d9511203ef122fa0a69a97 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 640 2.4E-224 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_38471 09387a5742d9511203ef122fa0a69a97 938 SUPERFAMILY SSF50677 204 403 4.71E-56 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Y11_38471 09387a5742d9511203ef122fa0a69a97 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_38471 09387a5742d9511203ef122fa0a69a97 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 2.9E-298 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Y11_38471 09387a5742d9511203ef122fa0a69a97 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.391 T 13-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 Y11_38471 09387a5742d9511203ef122fa0a69a97 938 Gene3D G3DSA:1.10.730.20 640 929 3.8E-92 T 13-10-2018 Y11_38471 09387a5742d9511203ef122fa0a69a97 938 SUPERFAMILY SSF47323 652 929 5.98E-78 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_38471 09387a5742d9511203ef122fa0a69a97 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 1.6E-29 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Y11_38471 09387a5742d9511203ef122fa0a69a97 938 Gene3D G3DSA:3.40.50.620 25 629 1.6E-232 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_38471 09387a5742d9511203ef122fa0a69a97 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 8.6E-10 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Y11_38471 09387a5742d9511203ef122fa0a69a97 938 Gene3D G3DSA:3.90.740.10 195 408 1.6E-232 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Y11_38471 09387a5742d9511203ef122fa0a69a97 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 4.8E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Y11_38471 09387a5742d9511203ef122fa0a69a97 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 4.8E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Y11_38471 09387a5742d9511203ef122fa0a69a97 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 4.8E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Y11_38471 09387a5742d9511203ef122fa0a69a97 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 4.8E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Y11_38471 09387a5742d9511203ef122fa0a69a97 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 4.8E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Y11_05241 7f3eaee928b008b8c80fd81346c2a94d 55 Pfam PF01783 Ribosomal L32p protein family 2 54 1.1E-19 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_05241 7f3eaee928b008b8c80fd81346c2a94d 55 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.225 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_05241 7f3eaee928b008b8c80fd81346c2a94d 55 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 3.5E-20 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_05241 7f3eaee928b008b8c80fd81346c2a94d 55 SUPERFAMILY SSF57829 2 54 1.04E-18 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Y11_16741 82715b02d8a4ae2373554d9d75c49b3e 239 SMART SM00382 58 228 4.1E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_16741 82715b02d8a4ae2373554d9d75c49b3e 239 Gene3D G3DSA:3.40.50.300 22 237 2.4E-38 T 13-10-2018 Y11_16741 82715b02d8a4ae2373554d9d75c49b3e 239 Pfam PF00005 ABC transporter 49 180 4.0E-19 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_16741 82715b02d8a4ae2373554d9d75c49b3e 239 SUPERFAMILY SSF52540 46 233 7.73E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_13541 2cae5702dc7c3d8053cdb99466286667 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 7.4E-13 T 13-10-2018 IPR000305 GIY-YIG endonuclease Y11_13541 2cae5702dc7c3d8053cdb99466286667 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 542 1.4E-45 T 13-10-2018 IPR001162 UvrC family homology region Y11_13541 2cae5702dc7c3d8053cdb99466286667 610 Gene3D G3DSA:1.10.150.20 555 610 7.5E-23 T 13-10-2018 Y11_13541 2cae5702dc7c3d8053cdb99466286667 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 29.927 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Y11_13541 2cae5702dc7c3d8053cdb99466286667 610 SUPERFAMILY SSF46600 191 243 6.28E-13 T 13-10-2018 IPR036876 UVR domain superfamily Y11_13541 2cae5702dc7c3d8053cdb99466286667 610 SUPERFAMILY SSF47781 521 609 2.38E-17 T 13-10-2018 IPR010994 RuvA domain 2-like Y11_13541 2cae5702dc7c3d8053cdb99466286667 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 8 589 2.3E-228 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Y11_13541 2cae5702dc7c3d8053cdb99466286667 610 Pfam PF02151 UvrB/uvrC motif 205 237 4.2E-10 T 13-10-2018 IPR001943 UVR domain GO:0005515 Y11_13541 2cae5702dc7c3d8053cdb99466286667 610 Gene3D G3DSA:3.40.1440.10 5 102 3.3E-32 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Y11_13541 2cae5702dc7c3d8053cdb99466286667 610 Gene3D G3DSA:3.30.420.340 377 552 1.7E-46 T 13-10-2018 IPR038476 UvrC homology region 2 superfamily Y11_13541 2cae5702dc7c3d8053cdb99466286667 610 Gene3D G3DSA:4.10.860.10 188 241 5.1E-5 T 13-10-2018 Y11_13541 2cae5702dc7c3d8053cdb99466286667 610 SUPERFAMILY SSF82771 17 100 4.84E-25 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Y11_13541 2cae5702dc7c3d8053cdb99466286667 610 SMART SM00465 17 98 5.9E-23 T 13-10-2018 IPR000305 GIY-YIG endonuclease Y11_39221 184d99db81fee2fedc7efb12f5ac23c9 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 6.5E-11 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Y11_39221 184d99db81fee2fedc7efb12f5ac23c9 144 Gene3D G3DSA:3.30.700.10 7 141 1.2E-24 T 13-10-2018 Y11_39221 184d99db81fee2fedc7efb12f5ac23c9 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 3.7E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Y11_39221 184d99db81fee2fedc7efb12f5ac23c9 144 SUPERFAMILY SSF54523 28 138 1.83E-24 T 13-10-2018 Y11_39221 184d99db81fee2fedc7efb12f5ac23c9 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Y11_11341 bf16112895d29c4069ed35dc9a87f203 452 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 29 450 42.033 T 13-10-2018 IPR006698 Uncharacterised protein family UPF0229 Y11_11341 bf16112895d29c4069ed35dc9a87f203 452 Pfam PF04285 Protein of unknown function (DUF444) 32 448 4.5E-187 T 13-10-2018 IPR006698 Uncharacterised protein family UPF0229 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 Gene3D G3DSA:2.70.150.10 41 273 2.1E-83 T 13-10-2018 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 Pfam PF00122 E1-E2 ATPase 143 350 1.4E-39 T 13-10-2018 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 Pfam PF00702 haloacid dehalogenase-like hydrolase 366 654 1.4E-18 T 13-10-2018 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 Gene3D G3DSA:3.40.1110.10 406 547 1.9E-77 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 14 899 0.0 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 372 378 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 SUPERFAMILY SSF56784 357 680 2.64E-34 T 13-10-2018 IPR036412 HAD-like superfamily Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 Gene3D G3DSA:3.40.50.1000 548 684 1.9E-77 T 13-10-2018 IPR023214 HAD superfamily Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 Gene3D G3DSA:3.40.50.1000 367 379 2.1E-83 T 13-10-2018 IPR023214 HAD superfamily Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 267 408 2.1E-19 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 614 729 6.7E-28 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 Gene3D G3DSA:1.20.1110.10 74 366 2.1E-83 T 13-10-2018 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 SUPERFAMILY SSF81660 376 551 2.16E-32 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 Pfam PF00689 Cation transporting ATPase, C-terminus 723 891 1.4E-16 T 13-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 Gene3D G3DSA:1.20.1110.10 685 805 1.9E-77 T 13-10-2018 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 SUPERFAMILY SSF81653 160 270 2.22E-24 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 SMART SM00831 23 96 5.1E-19 T 13-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 PRINTS PR01836 Magnesium-transporting ATPase signature 404 417 1.8E-88 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 PRINTS PR01836 Magnesium-transporting ATPase signature 748 761 1.8E-88 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 PRINTS PR01836 Magnesium-transporting ATPase signature 283 299 1.8E-88 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 PRINTS PR01836 Magnesium-transporting ATPase signature 698 713 1.8E-88 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 PRINTS PR01836 Magnesium-transporting ATPase signature 716 727 1.8E-88 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 PRINTS PR01836 Magnesium-transporting ATPase signature 803 824 1.8E-88 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 PRINTS PR01836 Magnesium-transporting ATPase signature 853 874 1.8E-88 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 PRINTS PR01836 Magnesium-transporting ATPase signature 300 319 1.8E-88 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 PRINTS PR01836 Magnesium-transporting ATPase signature 768 784 1.8E-88 T 13-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 Pfam PF00690 Cation transporter/ATPase, N-terminus 25 91 3.4E-16 T 13-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Y11_14721 a7811e1c8d78d3e3993b73309d5c8042 900 SUPERFAMILY SSF81665 26 897 9.29E-102 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Y11_27501 ee4ab69e5ddb67c41da7f89b1be10cdd 943 Gene3D G3DSA:3.40.50.300 617 936 4.6E-138 T 13-10-2018 Y11_27501 ee4ab69e5ddb67c41da7f89b1be10cdd 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.928 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Y11_27501 ee4ab69e5ddb67c41da7f89b1be10cdd 943 Gene3D G3DSA:1.20.1580.10 692 830 4.6E-138 T 13-10-2018 Y11_27501 ee4ab69e5ddb67c41da7f89b1be10cdd 943 SUPERFAMILY SSF52540 1 569 2.92E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_27501 ee4ab69e5ddb67c41da7f89b1be10cdd 943 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_27501 ee4ab69e5ddb67c41da7f89b1be10cdd 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Y11_27501 ee4ab69e5ddb67c41da7f89b1be10cdd 943 SUPERFAMILY SSF52540 615 911 2.66E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_27501 ee4ab69e5ddb67c41da7f89b1be10cdd 943 Gene3D G3DSA:3.40.50.300 6 595 9.2E-244 T 13-10-2018 Y11_27501 ee4ab69e5ddb67c41da7f89b1be10cdd 943 Gene3D G3DSA:3.30.190.20 130 244 9.2E-244 T 13-10-2018 Y11_27501 ee4ab69e5ddb67c41da7f89b1be10cdd 943 Gene3D G3DSA:1.20.1580.10 90 492 9.2E-244 T 13-10-2018 Y11_27501 ee4ab69e5ddb67c41da7f89b1be10cdd 943 Gene3D G3DSA:1.10.8.280 287 403 9.2E-244 T 13-10-2018 Y11_27501 ee4ab69e5ddb67c41da7f89b1be10cdd 943 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_08201 382a519aa0a8cb9aac30c3a81a4f79d5 248 SMART SM00382 26 223 5.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_08201 382a519aa0a8cb9aac30c3a81a4f79d5 248 SUPERFAMILY SSF52540 2 231 1.36E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_08201 382a519aa0a8cb9aac30c3a81a4f79d5 248 Pfam PF00005 ABC transporter 17 172 4.5E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_08201 382a519aa0a8cb9aac30c3a81a4f79d5 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_08201 382a519aa0a8cb9aac30c3a81a4f79d5 248 Gene3D G3DSA:3.40.50.300 1 248 2.4E-66 T 13-10-2018 Y11_08201 382a519aa0a8cb9aac30c3a81a4f79d5 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 3.3E-112 T 13-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 Y11_31851 205994dc4854af78acf26a196614c4f3 651 SMART SM00642 152 549 1.7E-7 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Y11_31851 205994dc4854af78acf26a196614c4f3 651 Gene3D G3DSA:2.60.40.10 1 122 2.6E-44 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_31851 205994dc4854af78acf26a196614c4f3 651 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 1 86 5.4E-20 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Y11_31851 205994dc4854af78acf26a196614c4f3 651 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 1 627 1.7E-272 T 13-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 Y11_31851 205994dc4854af78acf26a196614c4f3 651 SUPERFAMILY SSF51445 119 555 7.72E-124 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_31851 205994dc4854af78acf26a196614c4f3 651 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 1 649 71.112 T 13-10-2018 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 Y11_31851 205994dc4854af78acf26a196614c4f3 651 Gene3D G3DSA:2.60.40.1180 564 649 1.8E-37 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta Y11_31851 205994dc4854af78acf26a196614c4f3 651 Pfam PF00128 Alpha amylase, catalytic domain 174 280 5.4E-7 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Y11_31851 205994dc4854af78acf26a196614c4f3 651 Gene3D G3DSA:3.20.20.80 123 563 5.3E-173 T 13-10-2018 Y11_31851 205994dc4854af78acf26a196614c4f3 651 SUPERFAMILY SSF51011 565 621 1.56E-5 T 13-10-2018 Y11_31851 205994dc4854af78acf26a196614c4f3 651 SUPERFAMILY SSF81296 1 133 2.2E-43 T 13-10-2018 IPR014756 Immunoglobulin E-set Y11_34621 1f9794b414fee08115dca3ab5ea8810e 508 Pfam PF02646 RmuC family 171 467 2.7E-104 T 13-10-2018 IPR003798 DNA recombination RmuC Y11_23991 8041b111b4f314d9498d318c8e9274bc 113 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 20.969 T 13-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Y11_23991 8041b111b4f314d9498d318c8e9274bc 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 13-10-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site Y11_23991 8041b111b4f314d9498d318c8e9274bc 113 Gene3D G3DSA:3.30.2320.80 1 113 2.5E-29 T 13-10-2018 Y11_23991 8041b111b4f314d9498d318c8e9274bc 113 PIRSF PIRSF004761 1 113 2.3E-36 T 13-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Y11_23991 8041b111b4f314d9498d318c8e9274bc 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 7.4E-37 T 13-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Y11_23991 8041b111b4f314d9498d318c8e9274bc 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 7.3E-31 T 13-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Y11_34271 2acafcc2ee4a5318932712220dcb9a8c 319 PIRSF PIRSF003097 18 315 2.7E-96 T 13-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Y11_34271 2acafcc2ee4a5318932712220dcb9a8c 319 Pfam PF02687 FtsX-like permease family 220 309 1.9E-6 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Y11_34271 2acafcc2ee4a5318932712220dcb9a8c 319 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 21 318 5.2E-131 T 13-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Y11_27831 e84a55ab35ee44b37cfffd1e755c10b9 575 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 7 572 0.0 T 13-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 Y11_27831 e84a55ab35ee44b37cfffd1e755c10b9 575 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 5.2E-253 T 13-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 Y11_27831 e84a55ab35ee44b37cfffd1e755c10b9 575 PIRSF PIRSF000719 1 575 1.7E-298 T 13-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 Y11_27831 e84a55ab35ee44b37cfffd1e755c10b9 575 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 43.859 T 13-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 Y11_40131 52bc03f26623e2e00bb9c991ea392ada 86 Gene3D G3DSA:3.30.2310.20 2 86 1.6E-16 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Y11_40131 52bc03f26623e2e00bb9c991ea392ada 86 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 72 9.3E-8 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Y11_40131 52bc03f26623e2e00bb9c991ea392ada 86 SUPERFAMILY SSF143011 1 81 1.96E-16 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Y11_28721 a4deb6d3c268d28a6c17a634323c2431 232 Gene3D G3DSA:1.10.10.10 130 232 1.4E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_28721 a4deb6d3c268d28a6c17a634323c2431 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 4.6E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_28721 a4deb6d3c268d28a6c17a634323c2431 232 SUPERFAMILY SSF52172 1 188 5.41E-42 T 13-10-2018 IPR011006 CheY-like superfamily Y11_28721 a4deb6d3c268d28a6c17a634323c2431 232 Gene3D G3DSA:3.40.50.2300 1 129 2.0E-42 T 13-10-2018 Y11_28721 a4deb6d3c268d28a6c17a634323c2431 232 Pfam PF00072 Response regulator receiver domain 4 112 9.1E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_28721 a4deb6d3c268d28a6c17a634323c2431 232 SMART SM00448 2 111 6.0E-47 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_28721 a4deb6d3c268d28a6c17a634323c2431 232 SMART SM00862 152 228 1.0E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_27631 7a6385ef19f52a2a36812da8024a12c5 202 Gene3D G3DSA:2.10.109.10 80 202 8.4E-47 T 13-10-2018 Y11_27631 7a6385ef19f52a2a36812da8024a12c5 202 Gene3D G3DSA:1.10.10.10 1 70 3.2E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_27631 7a6385ef19f52a2a36812da8024a12c5 202 Pfam PF01726 LexA DNA binding domain 1 65 2.5E-29 T 13-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 Y11_27631 7a6385ef19f52a2a36812da8024a12c5 202 SUPERFAMILY SSF51306 76 198 2.96E-38 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Y11_27631 7a6385ef19f52a2a36812da8024a12c5 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 7.4E-14 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Y11_27631 7a6385ef19f52a2a36812da8024a12c5 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 7.4E-14 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Y11_27631 7a6385ef19f52a2a36812da8024a12c5 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 7.4E-14 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Y11_27631 7a6385ef19f52a2a36812da8024a12c5 202 Pfam PF00717 Peptidase S24-like 114 179 5.7E-15 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Y11_27631 7a6385ef19f52a2a36812da8024a12c5 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 8.4E-84 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Y11_27631 7a6385ef19f52a2a36812da8024a12c5 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.406 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Y11_27631 7a6385ef19f52a2a36812da8024a12c5 202 SUPERFAMILY SSF46785 3 69 6.67E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_07391 3123828b278ef6fdafc57ad8f29c360e 691 SUPERFAMILY SSF52096 167 535 1.34E-69 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Y11_07391 3123828b278ef6fdafc57ad8f29c360e 691 Pfam PF03572 Peptidase family S41 356 529 5.6E-53 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Y11_07391 3123828b278ef6fdafc57ad8f29c360e 691 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 320 1.9E-14 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Y11_07391 3123828b278ef6fdafc57ad8f29c360e 691 SUPERFAMILY SSF50156 216 347 1.04E-16 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Y11_07391 3123828b278ef6fdafc57ad8f29c360e 691 Gene3D G3DSA:3.90.226.10 339 545 1.6E-51 T 13-10-2018 Y11_07391 3123828b278ef6fdafc57ad8f29c360e 691 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 534 667 8.3E-43 T 13-10-2018 IPR020992 Tail specific protease, C-terminal Y11_07391 3123828b278ef6fdafc57ad8f29c360e 691 Gene3D G3DSA:2.30.42.10 246 338 2.7E-16 T 13-10-2018 Y11_07391 3123828b278ef6fdafc57ad8f29c360e 691 SMART SM00228 246 323 3.7E-10 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Y11_07391 3123828b278ef6fdafc57ad8f29c360e 691 SMART SM00245 326 531 3.0E-81 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Y11_07391 3123828b278ef6fdafc57ad8f29c360e 691 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 551 4.2E-126 T 13-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Y11_04001 dd3760bc55777b8a6201e7bd0b9d8e72 1204 Pfam PF01580 FtsK/SpoIIIE family 822 1035 9.8E-73 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Y11_04001 dd3760bc55777b8a6201e7bd0b9d8e72 1204 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 2.0E-44 T 13-10-2018 IPR025199 DNA translocase FtsK, 4TM region Y11_04001 dd3760bc55777b8a6201e7bd0b9d8e72 1204 SMART SM00843 1137 1202 1.1E-40 T 13-10-2018 IPR018541 FtsK gamma domain Y11_04001 dd3760bc55777b8a6201e7bd0b9d8e72 1204 Gene3D G3DSA:3.40.50.300 819 1121 7.7E-124 T 13-10-2018 Y11_04001 dd3760bc55777b8a6201e7bd0b9d8e72 1204 SUPERFAMILY SSF52540 796 1108 6.11E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_04001 dd3760bc55777b8a6201e7bd0b9d8e72 1204 Pfam PF09397 Ftsk gamma domain 1139 1199 9.3E-27 T 13-10-2018 IPR018541 FtsK gamma domain Y11_04001 dd3760bc55777b8a6201e7bd0b9d8e72 1204 Gene3D G3DSA:3.30.980.40 714 818 4.3E-34 T 13-10-2018 Y11_04001 dd3760bc55777b8a6201e7bd0b9d8e72 1204 SUPERFAMILY SSF46785 1137 1202 2.04E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_04001 dd3760bc55777b8a6201e7bd0b9d8e72 1204 Gene3D G3DSA:1.10.10.10 1141 1204 3.6E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_16681 81d3332b90fc264e96d75409315bed3d 343 Pfam PF02348 Cytidylyltransferase 5 133 5.1E-17 T 13-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 Y11_16681 81d3332b90fc264e96d75409315bed3d 343 Gene3D G3DSA:3.90.550.10 1 217 7.6E-39 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_16681 81d3332b90fc264e96d75409315bed3d 343 Pfam PF03737 Aldolase/RraA 237 341 3.8E-8 T 13-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Y11_16681 81d3332b90fc264e96d75409315bed3d 343 SUPERFAMILY SSF53448 1 214 1.94E-30 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_16681 81d3332b90fc264e96d75409315bed3d 343 Gene3D G3DSA:3.50.30.40 223 343 4.7E-15 T 13-10-2018 Y11_16681 81d3332b90fc264e96d75409315bed3d 343 SUPERFAMILY SSF89562 260 341 1.7E-7 T 13-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Y11_01401 860cb4aeec3c46ce65354e679c76adb0 258 PRINTS PR01805 VacJ lipoprotein signature 105 122 9.3E-33 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Y11_01401 860cb4aeec3c46ce65354e679c76adb0 258 PRINTS PR01805 VacJ lipoprotein signature 36 49 9.3E-33 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Y11_01401 860cb4aeec3c46ce65354e679c76adb0 258 PRINTS PR01805 VacJ lipoprotein signature 54 70 9.3E-33 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Y11_01401 860cb4aeec3c46ce65354e679c76adb0 258 PRINTS PR01805 VacJ lipoprotein signature 144 161 9.3E-33 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Y11_01401 860cb4aeec3c46ce65354e679c76adb0 258 Pfam PF04333 MlaA lipoprotein 35 228 1.2E-65 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Y11_25621 408676cad2711a325c85d90b2fa9739f 455 Pfam PF02378 Phosphotransferase system, EIIC 100 382 1.7E-33 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Y11_25621 408676cad2711a325c85d90b2fa9739f 455 SUPERFAMILY SSF55604 1 52 2.22E-10 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_25621 408676cad2711a325c85d90b2fa9739f 455 Gene3D G3DSA:3.30.1360.60 1 51 2.1E-12 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_36371 2604fa08abe04555eae68f26c37ba1a5 187 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 185 3.2E-82 T 13-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ Y11_36371 2604fa08abe04555eae68f26c37ba1a5 187 Gene3D G3DSA:3.40.30.10 39 185 1.9E-6 T 13-10-2018 Y11_36371 2604fa08abe04555eae68f26c37ba1a5 187 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 23 183 3.0E-76 T 13-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ Y11_32951 d252f117c8daca16b432349f8e30f5bd 136 SUPERFAMILY SSF54686 3 133 4.84E-55 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Y11_32951 d252f117c8daca16b432349f8e30f5bd 136 Gene3D G3DSA:3.90.1170.10 1 136 1.3E-55 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Y11_32951 d252f117c8daca16b432349f8e30f5bd 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.821 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_32951 d252f117c8daca16b432349f8e30f5bd 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 9.2E-48 T 13-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Y11_32951 d252f117c8daca16b432349f8e30f5bd 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32951 d252f117c8daca16b432349f8e30f5bd 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32951 d252f117c8daca16b432349f8e30f5bd 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 4.3E-60 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_32951 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 1.0E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_32951 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 1.0E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_32951 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 1.0E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_32951 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 1.0E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_20201 7189ec8ecd23a4abbce65c52c102f911 150 SUPERFAMILY SSF63520 54 140 4.58E-9 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 Y11_20201 7189ec8ecd23a4abbce65c52c102f911 150 Gene3D G3DSA:1.10.1790.10 49 144 8.5E-6 T 13-10-2018 Y11_20201 7189ec8ecd23a4abbce65c52c102f911 150 Pfam PF00874 PRD domain 55 136 2.5E-8 T 13-10-2018 IPR011608 PRD domain GO:0006355 Y11_28101 c3b314b42ebeb66e34e9bd133f97598e 394 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 120 157 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Y11_28101 c3b314b42ebeb66e34e9bd133f97598e 394 Gene3D G3DSA:3.30.70.360 191 306 1.5E-79 T 13-10-2018 Y11_28101 c3b314b42ebeb66e34e9bd133f97598e 394 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 85 94 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Y11_28101 c3b314b42ebeb66e34e9bd133f97598e 394 SUPERFAMILY SSF55031 191 306 3.89E-22 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Y11_28101 c3b314b42ebeb66e34e9bd133f97598e 394 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 387 3.8E-151 T 13-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 Y11_28101 c3b314b42ebeb66e34e9bd133f97598e 394 SUPERFAMILY SSF53187 4 392 4.86E-56 T 13-10-2018 Y11_28101 c3b314b42ebeb66e34e9bd133f97598e 394 Pfam PF07687 Peptidase dimerisation domain 188 298 8.2E-26 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain Y11_28101 c3b314b42ebeb66e34e9bd133f97598e 394 Gene3D G3DSA:3.40.630.10 24 374 1.5E-79 T 13-10-2018 Y11_28101 c3b314b42ebeb66e34e9bd133f97598e 394 Pfam PF01546 Peptidase family M20/M25/M40 86 387 8.6E-34 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 Y11_28101 c3b314b42ebeb66e34e9bd133f97598e 394 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 392 65.068 T 13-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 Y11_03281 4f2659ec7442dea5baf0d01fa8137aab 221 Gene3D G3DSA:1.10.10.10 2 95 8.7E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_03281 4f2659ec7442dea5baf0d01fa8137aab 221 SUPERFAMILY SSF46894 4 93 2.58E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_03281 4f2659ec7442dea5baf0d01fa8137aab 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 21 92 2.3E-15 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_03281 4f2659ec7442dea5baf0d01fa8137aab 221 SMART SM00862 18 92 1.9E-12 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_33281 e5910307ad5c7e0ef1fc0bd27a0fc29f 273 SUPERFAMILY SSF53223 4 102 1.61E-30 T 13-10-2018 Y11_33281 e5910307ad5c7e0ef1fc0bd27a0fc29f 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 8.5E-24 T 13-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Y11_33281 e5910307ad5c7e0ef1fc0bd27a0fc29f 273 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 271 7.7E-93 T 13-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Y11_33281 e5910307ad5c7e0ef1fc0bd27a0fc29f 273 SUPERFAMILY SSF51735 103 268 1.73E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_33281 e5910307ad5c7e0ef1fc0bd27a0fc29f 273 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 119 191 1.3E-10 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Y11_33281 e5910307ad5c7e0ef1fc0bd27a0fc29f 273 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 270 32.31 T 13-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Y11_33281 e5910307ad5c7e0ef1fc0bd27a0fc29f 273 Gene3D G3DSA:3.40.50.720 103 245 1.8E-83 T 13-10-2018 Y11_33281 e5910307ad5c7e0ef1fc0bd27a0fc29f 273 Gene3D G3DSA:3.40.50.10860 6 255 1.8E-83 T 13-10-2018 Y11_36581 223ba7b7b3b87e9e63439cdf175b3a51 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.0E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_36581 223ba7b7b3b87e9e63439cdf175b3a51 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.0E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_36581 223ba7b7b3b87e9e63439cdf175b3a51 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.0E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_36581 223ba7b7b3b87e9e63439cdf175b3a51 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.0E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_36581 223ba7b7b3b87e9e63439cdf175b3a51 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.219 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Y11_36581 223ba7b7b3b87e9e63439cdf175b3a51 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 6.2E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_36581 223ba7b7b3b87e9e63439cdf175b3a51 390 Pfam PF01018 GTP1/OBG 4 156 2.0E-58 T 13-10-2018 IPR006169 GTP1/OBG domain Y11_36581 223ba7b7b3b87e9e63439cdf175b3a51 390 Gene3D G3DSA:3.40.50.300 159 339 2.2E-52 T 13-10-2018 Y11_36581 223ba7b7b3b87e9e63439cdf175b3a51 390 SUPERFAMILY SSF52540 151 338 1.33E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_36581 223ba7b7b3b87e9e63439cdf175b3a51 390 Gene3D G3DSA:2.70.210.12 1 158 1.0E-62 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily Y11_36581 223ba7b7b3b87e9e63439cdf175b3a51 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 13-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 Y11_36581 223ba7b7b3b87e9e63439cdf175b3a51 390 PIRSF PIRSF002401 1 378 1.6E-140 T 13-10-2018 IPR035101 GTP-binding protein, Obg-type Y11_36581 223ba7b7b3b87e9e63439cdf175b3a51 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.8E-146 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Y11_36581 223ba7b7b3b87e9e63439cdf175b3a51 390 SUPERFAMILY SSF82051 2 157 3.79E-57 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily Y11_09541 704bad65e0e2916ad22826fb85f92cfe 173 Pfam PF01047 MarR family 57 98 3.1E-6 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Y11_09541 704bad65e0e2916ad22826fb85f92cfe 173 Gene3D G3DSA:1.10.10.10 14 166 4.9E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_09541 704bad65e0e2916ad22826fb85f92cfe 173 SUPERFAMILY SSF46785 35 164 7.28E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_09541 704bad65e0e2916ad22826fb85f92cfe 173 SMART SM00347 50 152 6.8E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Y11_33431 5bf01ba9cc4648c119f1b48354b28f02 308 Gene3D G3DSA:3.20.10.10 137 288 2.9E-111 T 13-10-2018 Y11_33431 5bf01ba9cc4648c119f1b48354b28f02 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 9 306 2.9E-143 T 13-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 Y11_33431 5bf01ba9cc4648c119f1b48354b28f02 308 Pfam PF01063 Amino-transferase class IV 35 267 4.3E-48 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Y11_33431 5bf01ba9cc4648c119f1b48354b28f02 308 Gene3D G3DSA:3.30.470.10 9 126 2.9E-111 T 13-10-2018 Y11_33431 5bf01ba9cc4648c119f1b48354b28f02 308 SUPERFAMILY SSF56752 6 307 6.28E-106 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Y11_33431 5bf01ba9cc4648c119f1b48354b28f02 308 ProSitePatterns PS00770 Aminotransferases class-IV signature. 193 222 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Y11_11421 ff09277ac5ae3586360e793854b0a4c7 425 SUPERFAMILY SSF54373 260 350 3.01E-17 T 13-10-2018 Y11_11421 ff09277ac5ae3586360e793854b0a4c7 425 Gene3D G3DSA:3.30.9.10 125 352 7.4E-51 T 13-10-2018 Y11_11421 ff09277ac5ae3586360e793854b0a4c7 425 Gene3D G3DSA:3.50.50.60 97 394 7.4E-51 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_11421 ff09277ac5ae3586360e793854b0a4c7 425 SUPERFAMILY SSF51905 1 407 6.86E-50 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_11421 ff09277ac5ae3586360e793854b0a4c7 425 Pfam PF01266 FAD dependent oxidoreductase 1 388 2.0E-69 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Y11_11421 ff09277ac5ae3586360e793854b0a4c7 425 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 401 49.258 T 13-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 Y11_11421 ff09277ac5ae3586360e793854b0a4c7 425 Gene3D G3DSA:3.50.50.60 1 70 1.8E-9 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_12491 b6cf6b6aae72d10583fd399b79a7bc38 372 SMART SM00267 183 351 2.1E-50 T 13-10-2018 IPR000160 GGDEF domain Y11_12491 b6cf6b6aae72d10583fd399b79a7bc38 372 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 192 351 3.9E-43 T 13-10-2018 IPR000160 GGDEF domain Y11_12491 b6cf6b6aae72d10583fd399b79a7bc38 372 SUPERFAMILY SSF55073 199 350 2.67E-42 T 13-10-2018 IPR029787 Nucleotide cyclase Y11_12491 b6cf6b6aae72d10583fd399b79a7bc38 372 Gene3D G3DSA:3.30.70.270 186 352 5.5E-50 T 13-10-2018 Y11_12491 b6cf6b6aae72d10583fd399b79a7bc38 372 Pfam PF00990 Diguanylate cyclase, GGDEF domain 194 347 1.1E-40 T 13-10-2018 IPR000160 GGDEF domain Y11_15371 1ece56c0c1fa8c9ab67ac7649efa9356 358 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 5 339 3.9E-156 T 13-10-2018 IPR005216 Citrate lyase ligase GO:0008771 Y11_15371 1ece56c0c1fa8c9ab67ac7649efa9356 358 Gene3D G3DSA:3.40.630.30 6 121 8.5E-8 T 13-10-2018 Y11_15371 1ece56c0c1fa8c9ab67ac7649efa9356 358 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 145 201 5.5E-9 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Y11_15371 1ece56c0c1fa8c9ab67ac7649efa9356 358 Pfam PF08218 Citrate lyase ligase C-terminal domain 145 331 2.6E-79 T 13-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 Y11_15371 1ece56c0c1fa8c9ab67ac7649efa9356 358 Gene3D G3DSA:3.40.50.620 141 353 8.2E-17 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_15371 1ece56c0c1fa8c9ab67ac7649efa9356 358 SUPERFAMILY SSF55729 36 116 4.69E-9 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_15371 1ece56c0c1fa8c9ab67ac7649efa9356 358 PIRSF PIRSF005751 1 349 1.1E-135 T 13-10-2018 IPR005216 Citrate lyase ligase GO:0008771 Y11_15371 1ece56c0c1fa8c9ab67ac7649efa9356 358 SMART SM00764 145 331 7.1E-126 T 13-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 Y11_15371 1ece56c0c1fa8c9ab67ac7649efa9356 358 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 111 335 2.0E-94 T 13-10-2018 Y11_15371 1ece56c0c1fa8c9ab67ac7649efa9356 358 SUPERFAMILY SSF52374 143 333 5.63E-26 T 13-10-2018 Y11_01371 d94677d438efce23406bc619622cd107 188 Gene3D G3DSA:3.40.30.10 26 186 3.8E-45 T 13-10-2018 Y11_01371 d94677d438efce23406bc619622cd107 188 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 11 183 1.4E-75 T 13-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 Y11_01371 d94677d438efce23406bc619622cd107 188 SUPERFAMILY SSF52833 51 184 4.13E-39 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_01371 d94677d438efce23406bc619622cd107 188 Pfam PF08534 Redoxin 47 169 2.7E-23 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Y11_01371 d94677d438efce23406bc619622cd107 188 ProSitePatterns PS00194 Thioredoxin family active site. 77 95 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Y11_22181 5a521d65e5bb0c9f04341181a7d3ed9a 354 SUPERFAMILY SSF52540 6 269 6.1E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_22181 5a521d65e5bb0c9f04341181a7d3ed9a 354 SUPERFAMILY SSF54752 272 327 2.35E-20 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Y11_22181 5a521d65e5bb0c9f04341181a7d3ed9a 354 SMART SM00382 59 230 1.1E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_22181 5a521d65e5bb0c9f04341181a7d3ed9a 354 Pfam PF00154 recA bacterial DNA recombination protein 9 270 7.5E-141 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Y11_22181 5a521d65e5bb0c9f04341181a7d3ed9a 354 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 3.6E-170 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Y11_22181 5a521d65e5bb0c9f04341181a7d3ed9a 354 ProSitePatterns PS00321 recA signature. 215 223 - T 13-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Y11_22181 5a521d65e5bb0c9f04341181a7d3ed9a 354 PRINTS PR00142 RecA protein signature 212 240 1.4E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Y11_22181 5a521d65e5bb0c9f04341181a7d3ed9a 354 PRINTS PR00142 RecA protein signature 299 316 1.4E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Y11_22181 5a521d65e5bb0c9f04341181a7d3ed9a 354 PRINTS PR00142 RecA protein signature 129 158 1.4E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Y11_22181 5a521d65e5bb0c9f04341181a7d3ed9a 354 PRINTS PR00142 RecA protein signature 167 196 1.4E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Y11_22181 5a521d65e5bb0c9f04341181a7d3ed9a 354 PRINTS PR00142 RecA protein signature 245 274 1.4E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Y11_22181 5a521d65e5bb0c9f04341181a7d3ed9a 354 PRINTS PR00142 RecA protein signature 95 124 1.4E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Y11_22181 5a521d65e5bb0c9f04341181a7d3ed9a 354 Hamap MF_00268 Protein RecA [recA]. 7 331 50.668 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Y11_22181 5a521d65e5bb0c9f04341181a7d3ed9a 354 Gene3D G3DSA:3.30.250.10 271 329 1.4E-25 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Y11_22181 5a521d65e5bb0c9f04341181a7d3ed9a 354 Gene3D G3DSA:3.40.50.300 28 269 4.1E-81 T 13-10-2018 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 SUPERFAMILY SSF53067 20 196 1.68E-50 T 13-10-2018 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 SUPERFAMILY SSF100934 504 615 8.24E-38 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 Gene3D G3DSA:3.90.640.10 238 311 1.4E-112 T 13-10-2018 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 4.4E-271 T 13-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 Pfam PF00012 Hsp70 protein 22 600 5.7E-197 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 Gene3D G3DSA:1.20.1270.10 521 615 9.0E-30 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.5E-52 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.5E-52 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.5E-52 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 1.5E-52 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.5E-52 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.5E-52 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 1.5E-52 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 SUPERFAMILY SSF100920 384 534 8.89E-50 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 SUPERFAMILY SSF53067 200 377 5.46E-51 T 13-10-2018 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 Gene3D G3DSA:3.30.420.40 194 361 1.4E-112 T 13-10-2018 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 Gene3D G3DSA:3.30.420.40 23 374 1.4E-112 T 13-10-2018 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 Gene3D G3DSA:2.60.34.10 379 520 4.5E-50 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Y11_42751 5be4dba9c5b5a0c2444c2191a0491e8e 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.725 T 13-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 Y11_04691 a7b95995c256993dd7a577708107001e 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 490 1.3E-40 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Y11_04691 a7b95995c256993dd7a577708107001e 684 Gene3D G3DSA:3.40.50.300 500 676 8.8E-26 T 13-10-2018 Y11_04691 a7b95995c256993dd7a577708107001e 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 5.2E-65 T 13-10-2018 IPR022161 DNA helicase IV, N-terminal domain Y11_04691 a7b95995c256993dd7a577708107001e 684 Pfam PF13361 UvrD-like helicase C-terminal domain 544 659 3.0E-14 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Y11_04691 a7b95995c256993dd7a577708107001e 684 Gene3D G3DSA:3.40.50.300 345 499 5.3E-22 T 13-10-2018 Y11_04691 a7b95995c256993dd7a577708107001e 684 Gene3D G3DSA:3.40.50.300 189 335 4.4E-29 T 13-10-2018 Y11_04691 a7b95995c256993dd7a577708107001e 684 SUPERFAMILY SSF52540 195 675 1.08E-84 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_11091 7c79f135c713c7eb86d2a733e75fe753 70 SUPERFAMILY SSF55729 1 56 1.37E-9 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_11091 7c79f135c713c7eb86d2a733e75fe753 70 Gene3D G3DSA:3.40.630.30 1 69 6.3E-14 T 13-10-2018 Y11_05561 b461f434d2ce4797585c1d795734eaf3 304 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 304 66.876 T 13-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 Y11_05561 b461f434d2ce4797585c1d795734eaf3 304 Pfam PF00480 ROK family 2 299 1.0E-67 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Y11_05561 b461f434d2ce4797585c1d795734eaf3 304 ProSitePatterns PS01125 ROK family signature. 130 157 - T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Y11_05561 b461f434d2ce4797585c1d795734eaf3 304 Gene3D G3DSA:3.30.420.40 119 290 2.8E-88 T 13-10-2018 Y11_05561 b461f434d2ce4797585c1d795734eaf3 304 Gene3D G3DSA:3.30.420.40 4 297 2.8E-88 T 13-10-2018 Y11_05561 b461f434d2ce4797585c1d795734eaf3 304 SUPERFAMILY SSF53067 1 300 2.23E-56 T 13-10-2018 Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 SMART SM00448 833 944 6.6E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 SMART SM00388 471 536 9.6E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 SUPERFAMILY SSF55874 525 694 3.41E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 Gene3D G3DSA:1.10.287.130 448 534 1.1E-22 T 13-10-2018 Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 SUPERFAMILY SSF47384 455 537 4.12E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 Pfam PF00512 His Kinase A (phospho-acceptor) domain 471 535 1.0E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 583 692 1.6E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 Gene3D G3DSA:3.30.565.10 537 696 1.0E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 SUPERFAMILY SSF52172 832 951 7.68E-40 T 13-10-2018 IPR011006 CheY-like superfamily Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 717 806 1.8E-32 T 13-10-2018 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 Gene3D G3DSA:3.40.50.2300 828 955 1.2E-39 T 13-10-2018 Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 SUPERFAMILY SSF52172 709 823 6.96E-39 T 13-10-2018 IPR011006 CheY-like superfamily Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 Gene3D G3DSA:3.40.50.10970 715 827 4.9E-12 T 13-10-2018 IPR038388 RcsC, C-terminal domain superfamily Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 8.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 8.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 8.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 8.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 SMART SM00387 583 694 5.5E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 Pfam PF00072 Response regulator receiver domain 835 944 2.4E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_02651 699e3c3db106fd8189231c9efa9f517d 955 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 949 27.488 T 13-10-2018 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021 Y11_33101 a9ea688fdcce9ae56c0fdb81b15346ce 129 SUPERFAMILY SSF53137 15 129 7.19E-48 T 13-10-2018 Y11_33101 a9ea688fdcce9ae56c0fdb81b15346ce 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.544 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Y11_33101 a9ea688fdcce9ae56c0fdb81b15346ce 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.7E-55 T 13-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_33101 a9ea688fdcce9ae56c0fdb81b15346ce 129 Pfam PF00411 Ribosomal protein S11 19 128 1.9E-54 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Y11_33101 a9ea688fdcce9ae56c0fdb81b15346ce 129 PIRSF PIRSF002131 1 129 1.6E-52 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Y11_33101 a9ea688fdcce9ae56c0fdb81b15346ce 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 13-10-2018 IPR018102 Ribosomal S11, conserved site Y11_33101 a9ea688fdcce9ae56c0fdb81b15346ce 129 Gene3D G3DSA:3.30.420.80 1 129 2.8E-58 T 13-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Y11_31951 fb6215658daabd3c10dd086223ea68db 903 SMART SM00421 836 893 7.9E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_31951 fb6215658daabd3c10dd086223ea68db 903 Gene3D G3DSA:1.25.40.10 441 811 2.9E-95 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_31951 fb6215658daabd3c10dd086223ea68db 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 2.7E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_31951 fb6215658daabd3c10dd086223ea68db 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 2.7E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_31951 fb6215658daabd3c10dd086223ea68db 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 2.7E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_31951 fb6215658daabd3c10dd086223ea68db 903 Gene3D G3DSA:1.10.10.10 828 900 6.5E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_31951 fb6215658daabd3c10dd086223ea68db 903 SUPERFAMILY SSF46894 829 895 7.14E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_31951 fb6215658daabd3c10dd086223ea68db 903 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 891 4.6E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_31951 fb6215658daabd3c10dd086223ea68db 903 SUPERFAMILY SSF52540 8 226 2.01E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_31951 fb6215658daabd3c10dd086223ea68db 903 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 36.912 T 13-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT Y11_31951 fb6215658daabd3c10dd086223ea68db 903 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_31951 fb6215658daabd3c10dd086223ea68db 903 SUPERFAMILY SSF48452 442 806 1.99E-157 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.3E-10 T 13-10-2018 IPR004176 Clp, N-terminal Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 5.1E-15 T 13-10-2018 IPR004176 Clp, N-terminal Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 SUPERFAMILY SSF81923 4 156 7.75E-43 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 SUPERFAMILY SSF52540 546 851 5.26E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 SMART SM00382 597 738 5.3E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 SMART SM00382 198 344 1.3E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 Gene3D G3DSA:1.10.1780.10 1 147 1.3E-35 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 2.6E-57 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 13-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 Gene3D G3DSA:3.40.50.300 550 764 3.5E-92 T 13-10-2018 Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 3.2E-13 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 Gene3D G3DSA:1.10.8.60 766 857 6.7E-26 T 13-10-2018 Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 SUPERFAMILY SSF52540 159 545 1.17E-99 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 SMART SM01086 766 855 3.1E-36 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 Gene3D G3DSA:3.40.50.300 343 544 1.1E-70 T 13-10-2018 Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 Gene3D G3DSA:3.40.50.300 148 342 2.5E-74 T 13-10-2018 Y11_21941 e3c141b5ac0e060166f4dab1956b8a11 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 844 1.5E-25 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Y11_22901 cee7e2a8ddbc72eb21d05773fd62c5e4 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 22 242 1.4E-93 T 13-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 Y11_22901 cee7e2a8ddbc72eb21d05773fd62c5e4 244 PIRSF PIRSF000857 3 244 3.1E-55 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Y11_22901 cee7e2a8ddbc72eb21d05773fd62c5e4 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 4.4E-50 T 13-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Y11_22901 cee7e2a8ddbc72eb21d05773fd62c5e4 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 6.4E-88 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Y11_22901 cee7e2a8ddbc72eb21d05773fd62c5e4 244 SUPERFAMILY SSF52402 22 208 6.47E-54 T 13-10-2018 Y11_22901 cee7e2a8ddbc72eb21d05773fd62c5e4 244 Gene3D G3DSA:3.40.50.620 2 216 2.6E-64 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_22901 cee7e2a8ddbc72eb21d05773fd62c5e4 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 39.508 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Y11_25041 6587405002ef6e4a9c4867ffead46f9c 119 SUPERFAMILY SSF55620 1 115 1.89E-37 T 13-10-2018 Y11_25041 6587405002ef6e4a9c4867ffead46f9c 119 Pfam PF02152 Dihydroneopterin aldolase 4 113 3.2E-32 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Y11_25041 6587405002ef6e4a9c4867ffead46f9c 119 SMART SM00905 4 114 4.0E-48 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Y11_25041 6587405002ef6e4a9c4867ffead46f9c 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 6.0E-29 T 13-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Y11_25041 6587405002ef6e4a9c4867ffead46f9c 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 1.4E-40 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Y11_25041 6587405002ef6e4a9c4867ffead46f9c 119 Gene3D G3DSA:3.30.1130.10 1 119 3.9E-45 T 13-10-2018 Y11_01421 6f331bd14d71e2811d55ffe3c0996ddc 74 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 1 74 7.2E-30 T 13-10-2018 IPR005272 Conserved hypothetical protein CHP00743 Y11_01421 6f331bd14d71e2811d55ffe3c0996ddc 74 Gene3D G3DSA:3.30.70.860 3 74 5.0E-27 T 13-10-2018 IPR035571 UPF0234-like, C-terminal Y11_01421 6f331bd14d71e2811d55ffe3c0996ddc 74 Pfam PF04175 Protein of unknown function (DUF406) 1 74 9.0E-30 T 13-10-2018 IPR005272 Conserved hypothetical protein CHP00743 Y11_p0671 29733b522c5d4d80fae6ed31402705fc 137 Pfam PF05932 Tir chaperone protein (CesT) family 4 121 8.7E-30 T 13-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 Y11_p0671 29733b522c5d4d80fae6ed31402705fc 137 Gene3D G3DSA:3.30.1460.10 1 127 1.4E-59 T 13-10-2018 Y11_p0671 29733b522c5d4d80fae6ed31402705fc 137 SUPERFAMILY SSF69635 2 127 9.73E-47 T 13-10-2018 Y11_p0671 29733b522c5d4d80fae6ed31402705fc 137 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 2 137 2.9E-60 T 13-10-2018 IPR013353 Type III secretion system chaperone YscB Y11_33451 cdfce7788ac83b71a0031f12cac6095b 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 4.3E-261 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Y11_33451 cdfce7788ac83b71a0031f12cac6095b 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Y11_33451 cdfce7788ac83b71a0031f12cac6095b 616 SUPERFAMILY SSF143975 3 420 5.23E-132 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Y11_33451 cdfce7788ac83b71a0031f12cac6095b 616 SUPERFAMILY SSF52016 421 610 4.0E-59 T 13-10-2018 Y11_33451 cdfce7788ac83b71a0031f12cac6095b 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Y11_33451 cdfce7788ac83b71a0031f12cac6095b 616 Gene3D G3DSA:3.50.30.80 421 573 9.4E-55 T 13-10-2018 Y11_33451 cdfce7788ac83b71a0031f12cac6095b 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 44.942 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Y11_33451 cdfce7788ac83b71a0031f12cac6095b 616 Pfam PF00920 Dehydratase family 34 607 9.8E-216 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Y11_39091 fe46aa74b1be92432285782c6bf33bd4 418 SMART SM00842 10 196 1.3E-96 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Y11_39091 fe46aa74b1be92432285782c6bf33bd4 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.1E-161 T 13-10-2018 IPR020823 Cell division protein FtsA Y11_39091 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.90.640.10 235 300 1.9E-115 T 13-10-2018 Y11_39091 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 197 359 1.9E-115 T 13-10-2018 Y11_39091 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.1490.110 87 169 1.9E-115 T 13-10-2018 Y11_39091 fe46aa74b1be92432285782c6bf33bd4 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 3.5E-30 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Y11_39091 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 13 379 1.9E-115 T 13-10-2018 Y11_39091 fe46aa74b1be92432285782c6bf33bd4 418 SUPERFAMILY SSF53067 198 384 2.13E-47 T 13-10-2018 Y11_39091 fe46aa74b1be92432285782c6bf33bd4 418 SUPERFAMILY SSF53067 8 221 7.12E-62 T 13-10-2018 Y11_39091 fe46aa74b1be92432285782c6bf33bd4 418 Pfam PF14450 Cell division protein FtsA 207 381 1.2E-24 T 13-10-2018 Y11_39091 fe46aa74b1be92432285782c6bf33bd4 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.689 T 13-10-2018 IPR020823 Cell division protein FtsA Y11_39091 fe46aa74b1be92432285782c6bf33bd4 418 PIRSF PIRSF003101 1 418 1.2E-153 T 13-10-2018 IPR020823 Cell division protein FtsA Y11_19661 becd52a7d785a8436d99e7197a507b99 70 Pfam PF13275 S4 domain 8 68 3.0E-22 T 13-10-2018 Y11_19661 becd52a7d785a8436d99e7197a507b99 70 SUPERFAMILY SSF55174 6 69 1.7E-18 T 13-10-2018 Y11_19661 becd52a7d785a8436d99e7197a507b99 70 Gene3D G3DSA:3.10.290.10 1 70 1.4E-25 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Y11_29931 7dfe29c30d87332a70cb503bb35ede0b 449 SUPERFAMILY SSF55874 275 439 1.07E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_29931 7dfe29c30d87332a70cb503bb35ede0b 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 6.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_29931 7dfe29c30d87332a70cb503bb35ede0b 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 6.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_29931 7dfe29c30d87332a70cb503bb35ede0b 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 6.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_29931 7dfe29c30d87332a70cb503bb35ede0b 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 6.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_29931 7dfe29c30d87332a70cb503bb35ede0b 449 SMART SM00388 221 288 1.8E-6 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_29931 7dfe29c30d87332a70cb503bb35ede0b 449 SMART SM00387 330 438 1.5E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_29931 7dfe29c30d87332a70cb503bb35ede0b 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 436 6.0E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_29931 7dfe29c30d87332a70cb503bb35ede0b 449 Gene3D G3DSA:3.30.565.10 288 446 1.3E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_29931 7dfe29c30d87332a70cb503bb35ede0b 449 Gene3D G3DSA:1.10.287.130 226 286 2.5E-12 T 13-10-2018 Y11_29931 7dfe29c30d87332a70cb503bb35ede0b 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 283 1.7E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_29931 7dfe29c30d87332a70cb503bb35ede0b 449 SUPERFAMILY SSF47384 213 282 8.63E-9 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 122 139 1.3E-81 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 214 226 1.3E-81 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 1.3E-81 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 160 176 1.3E-81 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 1.3E-81 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 140 158 1.3E-81 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 195 1.3E-81 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 1.3E-81 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 263 1.3E-81 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 PIRSF PIRSF000532 1 327 2.4E-123 T 13-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 Gene3D G3DSA:3.40.50.450 4 281 4.2E-114 T 13-10-2018 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 SUPERFAMILY SSF53784 3 315 3.27E-109 T 13-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 Pfam PF00365 Phosphofructokinase 4 277 8.2E-108 T 13-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 302 1.9E-121 T 13-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 ProSitePatterns PS00433 Phosphofructokinase signature. 245 263 - T 13-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 327 45.202 T 13-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Y11_28391 dee1425a764e663c734380ab537d7ed4 327 Gene3D G3DSA:3.40.50.460 144 253 4.2E-114 T 13-10-2018 Y11_08381 54a8884702247b71dbe5a30cf46b27dd 531 Pfam PF00884 Sulfatase 225 513 9.4E-48 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Y11_08381 54a8884702247b71dbe5a30cf46b27dd 531 Gene3D G3DSA:3.40.720.10 212 531 1.1E-89 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Y11_08381 54a8884702247b71dbe5a30cf46b27dd 531 SUPERFAMILY SSF53649 225 527 6.32E-24 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Y11_08381 54a8884702247b71dbe5a30cf46b27dd 531 Pfam PF08019 Domain of unknown function (DUF1705) 44 196 7.0E-51 T 13-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 Y11_11071 20e371a184f8f32f69989cbdcd732082 154 SUPERFAMILY SSF52172 7 126 1.71E-31 T 13-10-2018 IPR011006 CheY-like superfamily Y11_11071 20e371a184f8f32f69989cbdcd732082 154 Pfam PF00072 Response regulator receiver domain 10 120 5.4E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_11071 20e371a184f8f32f69989cbdcd732082 154 SMART SM00448 8 120 3.2E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_11071 20e371a184f8f32f69989cbdcd732082 154 Gene3D G3DSA:3.40.50.2300 1 130 4.5E-32 T 13-10-2018 Y11_19841 0532dc64498d42777070252aefbdebad 550 SUPERFAMILY SSF55816 363 542 3.27E-54 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_19841 0532dc64498d42777070252aefbdebad 550 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_19841 0532dc64498d42777070252aefbdebad 550 Gene3D G3DSA:3.90.780.10 363 549 1.3E-62 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_19841 0532dc64498d42777070252aefbdebad 550 PRINTS PR01607 Apyrase family signature 484 503 1.0E-61 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_19841 0532dc64498d42777070252aefbdebad 550 PRINTS PR01607 Apyrase family signature 238 261 1.0E-61 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_19841 0532dc64498d42777070252aefbdebad 550 PRINTS PR01607 Apyrase family signature 207 224 1.0E-61 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_19841 0532dc64498d42777070252aefbdebad 550 PRINTS PR01607 Apyrase family signature 283 303 1.0E-61 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_19841 0532dc64498d42777070252aefbdebad 550 PRINTS PR01607 Apyrase family signature 32 50 1.0E-61 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_19841 0532dc64498d42777070252aefbdebad 550 PRINTS PR01607 Apyrase family signature 417 440 1.0E-61 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_19841 0532dc64498d42777070252aefbdebad 550 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_19841 0532dc64498d42777070252aefbdebad 550 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 7.8E-18 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Y11_19841 0532dc64498d42777070252aefbdebad 550 Gene3D G3DSA:3.60.21.10 26 362 3.1E-133 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Y11_19841 0532dc64498d42777070252aefbdebad 550 SUPERFAMILY SSF56300 27 361 1.97E-98 T 13-10-2018 Y11_19841 0532dc64498d42777070252aefbdebad 550 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 509 1.6E-36 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_37311 f23a7bd839e57e1ff8b58f9321d73f87 183 Pfam PF00583 Acetyltransferase (GNAT) family 60 160 5.3E-15 T 13-10-2018 IPR000182 GNAT domain Y11_37311 f23a7bd839e57e1ff8b58f9321d73f87 183 Gene3D G3DSA:3.40.630.30 31 167 7.4E-26 T 13-10-2018 Y11_37311 f23a7bd839e57e1ff8b58f9321d73f87 183 SUPERFAMILY SSF55729 25 182 3.95E-29 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_23201 b76f81aab02ce96d3da01669746090fc 659 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 658 42.566 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 TIGRFAM TIGR01273 speA: arginine decarboxylase 32 657 1.3E-269 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 Gene3D G3DSA:3.20.20.10 94 370 6.0E-233 T 13-10-2018 IPR029066 PLP-binding barrel Y11_23201 b76f81aab02ce96d3da01669746090fc 659 Gene3D G3DSA:2.40.37.10 39 591 6.0E-233 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 PIRSF PIRSF001336 17 659 9.1E-254 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 PRINTS PR01180 Arginine decarboxylase signature 514 539 1.3E-73 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 PRINTS PR01180 Arginine decarboxylase signature 93 108 1.3E-73 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 PRINTS PR01180 Arginine decarboxylase signature 567 588 1.3E-73 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 PRINTS PR01180 Arginine decarboxylase signature 221 243 1.3E-73 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 PRINTS PR01180 Arginine decarboxylase signature 348 365 1.3E-73 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 PRINTS PR01180 Arginine decarboxylase signature 489 510 1.3E-73 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 PRINTS PR01180 Arginine decarboxylase signature 197 218 1.3E-73 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 PRINTS PR01180 Arginine decarboxylase signature 117 131 1.3E-73 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 PRINTS PR01180 Arginine decarboxylase signature 171 186 1.3E-73 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 SUPERFAMILY SSF50621 482 588 2.96E-8 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 Gene3D G3DSA:1.20.58.930 387 482 6.0E-233 T 13-10-2018 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 264 277 8.7E-19 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 125 143 8.7E-19 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 358 377 8.7E-19 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 147 159 8.7E-19 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 567 580 8.7E-19 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 125 143 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Y11_23201 b76f81aab02ce96d3da01669746090fc 659 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 101 368 2.1E-67 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Y11_23201 b76f81aab02ce96d3da01669746090fc 659 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 302 315 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Y11_23201 b76f81aab02ce96d3da01669746090fc 659 SUPERFAMILY SSF51419 93 370 4.49E-67 T 13-10-2018 IPR029066 PLP-binding barrel Y11_35031 252565fb25d649e2d793376a40882db4 167 Gene3D G3DSA:1.20.120.1370 1 152 4.4E-55 T 13-10-2018 IPR038309 Rsd/AlgQ superfamily Y11_35031 252565fb25d649e2d793376a40882db4 167 PIRSF PIRSF016548 1 161 4.6E-53 T 13-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 Y11_35031 252565fb25d649e2d793376a40882db4 167 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 149 8.5E-58 T 13-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 Y11_35031 252565fb25d649e2d793376a40882db4 167 Hamap MF_01181 Regulator of sigma D [rsd]. 1 153 40.756 T 13-10-2018 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd Y11_25611 c539662e4545649657584db2b3eeab87 302 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 3.0E-131 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 Y11_25611 c539662e4545649657584db2b3eeab87 302 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 13-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 Y11_25611 c539662e4545649657584db2b3eeab87 302 SUPERFAMILY SSF53697 8 251 6.9E-72 T 13-10-2018 Y11_25611 c539662e4545649657584db2b3eeab87 302 Gene3D G3DSA:1.10.8.1080 221 299 7.6E-30 T 13-10-2018 Y11_25611 c539662e4545649657584db2b3eeab87 302 Gene3D G3DSA:3.40.50.10490 2 220 5.9E-81 T 13-10-2018 Y11_25611 c539662e4545649657584db2b3eeab87 302 Pfam PF13580 SIS domain 43 167 1.3E-12 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_25611 c539662e4545649657584db2b3eeab87 302 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 42.655 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 Y11_13341 806d05e689cffd89cf95ebe7634451cf 149 Pfam PF05069 Phage virion morphogenesis family 3 145 3.3E-36 T 13-10-2018 IPR006522 Phage virion morphogensis protein Y11_13341 806d05e689cffd89cf95ebe7634451cf 149 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 7 146 3.7E-39 T 13-10-2018 IPR006522 Phage virion morphogensis protein Y11_25311 806d05e689cffd89cf95ebe7634451cf 149 Pfam PF05069 Phage virion morphogenesis family 3 145 3.3E-36 T 13-10-2018 IPR006522 Phage virion morphogensis protein Y11_25311 806d05e689cffd89cf95ebe7634451cf 149 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 7 146 3.7E-39 T 13-10-2018 IPR006522 Phage virion morphogensis protein Y11_01941 248176dbe0df550c0442edc1839f615c 230 SUPERFAMILY SSF141868 11 218 4.32E-21 T 13-10-2018 IPR035919 EAL domain superfamily Y11_01941 248176dbe0df550c0442edc1839f615c 230 SMART SM00052 1 223 2.1E-5 T 13-10-2018 IPR001633 EAL domain Y11_01941 248176dbe0df550c0442edc1839f615c 230 Pfam PF00563 EAL domain 13 217 3.3E-16 T 13-10-2018 IPR001633 EAL domain Y11_01941 248176dbe0df550c0442edc1839f615c 230 Gene3D G3DSA:3.20.20.450 1 227 1.3E-42 T 13-10-2018 IPR035919 EAL domain superfamily Y11_23941 9f36e60576ce49ce91d7a8851fb8f817 758 Gene3D G3DSA:3.30.420.360 385 754 1.9E-127 T 13-10-2018 Y11_23941 9f36e60576ce49ce91d7a8851fb8f817 758 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 8 754 1.3E-257 T 13-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 Y11_23941 9f36e60576ce49ce91d7a8851fb8f817 758 PIRSF PIRSF006256 2 758 2.1E-271 T 13-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 Y11_23941 9f36e60576ce49ce91d7a8851fb8f817 758 Pfam PF00708 Acylphosphatase 7 87 6.5E-15 T 13-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Y11_23941 9f36e60576ce49ce91d7a8851fb8f817 758 SUPERFAMILY SSF53067 667 731 5.99E-5 T 13-10-2018 Y11_23941 9f36e60576ce49ce91d7a8851fb8f817 758 Pfam PF01300 Telomere recombination 210 386 2.5E-47 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 Y11_23941 9f36e60576ce49ce91d7a8851fb8f817 758 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Y11_23941 9f36e60576ce49ce91d7a8851fb8f817 758 Gene3D G3DSA:3.30.110.120 253 373 8.8E-139 T 13-10-2018 Y11_23941 9f36e60576ce49ce91d7a8851fb8f817 758 SUPERFAMILY SSF55821 174 391 7.02E-46 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Y11_23941 9f36e60576ce49ce91d7a8851fb8f817 758 Pfam PF07503 HypF finger 107 140 1.2E-17 T 13-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 Y11_23941 9f36e60576ce49ce91d7a8851fb8f817 758 Pfam PF07503 HypF finger 157 189 2.7E-16 T 13-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 Y11_23941 9f36e60576ce49ce91d7a8851fb8f817 758 SUPERFAMILY SSF54975 6 90 3.27E-18 T 13-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Y11_23941 9f36e60576ce49ce91d7a8851fb8f817 758 Gene3D G3DSA:3.30.420.350 491 742 1.9E-127 T 13-10-2018 Y11_23941 9f36e60576ce49ce91d7a8851fb8f817 758 Gene3D G3DSA:3.90.870.50 8 364 8.8E-139 T 13-10-2018 Y11_15391 d702cd17b94d1e03d4a3eb519ee782e4 228 PIRSF PIRSF006171 2 227 9.3E-75 T 13-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 Y11_15391 d702cd17b94d1e03d4a3eb519ee782e4 228 Pfam PF12431 Transcriptional regulator 133 161 7.9E-8 T 13-10-2018 IPR028141 Transcriptional regulator Y11_15391 d702cd17b94d1e03d4a3eb519ee782e4 228 Gene3D G3DSA:3.40.50.2300 4 150 1.5E-27 T 13-10-2018 Y11_15391 d702cd17b94d1e03d4a3eb519ee782e4 228 Pfam PF00072 Response regulator receiver domain 6 117 2.3E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_15391 d702cd17b94d1e03d4a3eb519ee782e4 228 SMART SM00448 4 117 1.9E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_15391 d702cd17b94d1e03d4a3eb519ee782e4 228 SUPERFAMILY SSF52172 4 157 1.99E-32 T 13-10-2018 IPR011006 CheY-like superfamily Y11_01631 558c023cefdda591e47d5524e2ef94b3 318 SMART SM00354 1 71 5.7E-26 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_01631 558c023cefdda591e47d5524e2ef94b3 318 Gene3D G3DSA:3.40.50.2300 56 292 1.8E-21 T 13-10-2018 Y11_01631 558c023cefdda591e47d5524e2ef94b3 318 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.0E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_01631 558c023cefdda591e47d5524e2ef94b3 318 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.0E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_01631 558c023cefdda591e47d5524e2ef94b3 318 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.3E-18 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_01631 558c023cefdda591e47d5524e2ef94b3 318 SUPERFAMILY SSF47413 2 59 1.59E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_01631 558c023cefdda591e47d5524e2ef94b3 318 SUPERFAMILY SSF53822 77 310 2.16E-19 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_01631 558c023cefdda591e47d5524e2ef94b3 318 Pfam PF13377 Periplasmic binding protein-like domain 161 292 5.3E-11 T 13-10-2018 Y11_01631 558c023cefdda591e47d5524e2ef94b3 318 Gene3D G3DSA:3.40.50.2300 152 278 1.8E-21 T 13-10-2018 Y11_01631 558c023cefdda591e47d5524e2ef94b3 318 Gene3D G3DSA:1.10.260.40 1 55 1.7E-20 T 13-10-2018 Y11_p0361 11f582924fbbbdc0228085eca4464e1f 47 Gene3D G3DSA:1.10.10.60 2 46 3.0E-5 T 13-10-2018 Y11_p0361 11f582924fbbbdc0228085eca4464e1f 47 SUPERFAMILY SSF46689 1 45 1.16E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_p0361 11f582924fbbbdc0228085eca4464e1f 47 Pfam PF01527 Transposase 2 45 4.6E-13 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Y11_p1011 11f582924fbbbdc0228085eca4464e1f 47 Gene3D G3DSA:1.10.10.60 2 46 3.0E-5 T 13-10-2018 Y11_p1011 11f582924fbbbdc0228085eca4464e1f 47 SUPERFAMILY SSF46689 1 45 1.16E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_p1011 11f582924fbbbdc0228085eca4464e1f 47 Pfam PF01527 Transposase 2 45 4.6E-13 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Y11_p0131 11f582924fbbbdc0228085eca4464e1f 47 Gene3D G3DSA:1.10.10.60 2 46 3.0E-5 T 13-10-2018 Y11_p0131 11f582924fbbbdc0228085eca4464e1f 47 SUPERFAMILY SSF46689 1 45 1.16E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_p0131 11f582924fbbbdc0228085eca4464e1f 47 Pfam PF01527 Transposase 2 45 4.6E-13 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Y11_11811 5cfcb57cbcbcf9fe4a7a4178bf04b89b 493 SUPERFAMILY SSF103473 217 479 9.94E-10 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_11811 5cfcb57cbcbcf9fe4a7a4178bf04b89b 493 SUPERFAMILY SSF103473 10 228 7.85E-22 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_11811 5cfcb57cbcbcf9fe4a7a4178bf04b89b 493 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 483 1.7E-184 T 13-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 Y11_11811 5cfcb57cbcbcf9fe4a7a4178bf04b89b 493 Gene3D G3DSA:1.20.1250.20 6 483 5.5E-114 T 13-10-2018 Y11_11811 5cfcb57cbcbcf9fe4a7a4178bf04b89b 493 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 3 486 45.817 T 13-10-2018 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B Y11_11811 5cfcb57cbcbcf9fe4a7a4178bf04b89b 493 Pfam PF00854 POT family 82 442 1.3E-87 T 13-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 Y11_11811 5cfcb57cbcbcf9fe4a7a4178bf04b89b 493 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 145 157 - T 13-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 Y11_04201 a983d06f63fab303f8fae71a7c47df51 230 SUPERFAMILY SSF52540 6 224 4.72E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_04201 a983d06f63fab303f8fae71a7c47df51 230 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 2.0E-92 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Y11_04201 a983d06f63fab303f8fae71a7c47df51 230 Gene3D G3DSA:3.40.50.300 1 230 1.8E-86 T 13-10-2018 Y11_04201 a983d06f63fab303f8fae71a7c47df51 230 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 33.866 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Y11_04201 a983d06f63fab303f8fae71a7c47df51 230 Pfam PF02224 Cytidylate kinase 8 221 2.3E-81 T 13-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Y11_05051 d44d447d09ca7d320e612f4d613ddb8f 194 Gene3D G3DSA:1.10.10.10 128 190 1.1E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_05051 d44d447d09ca7d320e612f4d613ddb8f 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 178 7.2E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_05051 d44d447d09ca7d320e612f4d613ddb8f 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 136 150 7.2E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_05051 d44d447d09ca7d320e612f4d613ddb8f 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 166 7.2E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_05051 d44d447d09ca7d320e612f4d613ddb8f 194 Pfam PF00072 Response regulator receiver domain 4 113 1.0E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_05051 d44d447d09ca7d320e612f4d613ddb8f 194 Pfam PF00196 Bacterial regulatory proteins, luxR family 135 189 5.0E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_05051 d44d447d09ca7d320e612f4d613ddb8f 194 Gene3D G3DSA:3.40.50.2300 1 127 1.8E-33 T 13-10-2018 Y11_05051 d44d447d09ca7d320e612f4d613ddb8f 194 SMART SM00421 133 190 2.1E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_05051 d44d447d09ca7d320e612f4d613ddb8f 194 SUPERFAMILY SSF52172 6 158 1.08E-30 T 13-10-2018 IPR011006 CheY-like superfamily Y11_05051 d44d447d09ca7d320e612f4d613ddb8f 194 SMART SM00448 2 113 2.8E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_11221 f67e5894d131c012e4d6e9bc0ee7a049 617 Gene3D G3DSA:3.90.226.10 317 539 3.5E-164 T 13-10-2018 Y11_11221 f67e5894d131c012e4d6e9bc0ee7a049 617 Gene3D G3DSA:3.40.1750.10 187 496 3.5E-164 T 13-10-2018 Y11_11221 f67e5894d131c012e4d6e9bc0ee7a049 617 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 607 2.8E-224 T 13-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 Y11_11221 f67e5894d131c012e4d6e9bc0ee7a049 617 Gene3D G3DSA:3.90.226.10 95 316 3.5E-164 T 13-10-2018 Y11_11221 f67e5894d131c012e4d6e9bc0ee7a049 617 PIRSF PIRSF001217 8 616 4.1E-216 T 13-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 Y11_11221 f67e5894d131c012e4d6e9bc0ee7a049 617 Pfam PF01343 Peptidase family S49 390 541 3.8E-47 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Y11_11221 f67e5894d131c012e4d6e9bc0ee7a049 617 Pfam PF01343 Peptidase family S49 139 289 8.6E-38 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Y11_11221 f67e5894d131c012e4d6e9bc0ee7a049 617 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 326 539 2.1E-51 T 13-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 Y11_11221 f67e5894d131c012e4d6e9bc0ee7a049 617 SUPERFAMILY SSF52096 34 286 1.09E-28 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Y11_11221 f67e5894d131c012e4d6e9bc0ee7a049 617 SUPERFAMILY SSF52096 316 528 3.14E-41 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Y11_05601 16b9a2a0acc73b5c3499dc25dea5c70f 454 SUPERFAMILY SSF47384 216 291 3.14E-5 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_05601 16b9a2a0acc73b5c3499dc25dea5c70f 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 7.1E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_05601 16b9a2a0acc73b5c3499dc25dea5c70f 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 7.1E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_05601 16b9a2a0acc73b5c3499dc25dea5c70f 454 SUPERFAMILY SSF55874 304 444 1.44E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_05601 16b9a2a0acc73b5c3499dc25dea5c70f 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 444 4.2E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_05601 16b9a2a0acc73b5c3499dc25dea5c70f 454 Gene3D G3DSA:1.10.287.130 183 290 2.3E-8 T 13-10-2018 Y11_05601 16b9a2a0acc73b5c3499dc25dea5c70f 454 Gene3D G3DSA:3.30.565.10 303 452 3.6E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_05601 16b9a2a0acc73b5c3499dc25dea5c70f 454 SMART SM00388 233 297 0.0049 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_05601 16b9a2a0acc73b5c3499dc25dea5c70f 454 Pfam PF08918 PhoQ Sensor 1 154 5.1E-73 T 13-10-2018 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 Y11_05601 16b9a2a0acc73b5c3499dc25dea5c70f 454 SMART SM00387 342 448 9.0E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_05601 16b9a2a0acc73b5c3499dc25dea5c70f 454 Gene3D G3DSA:3.30.450.140 11 162 1.2E-66 T 13-10-2018 IPR038429 PhoQ Sensor superfamily Y11_13441 21414d15ae9970a5754c534c4426a118 389 Pfam PF17482 Phage tail sheath C-terminal domain 274 376 3.9E-16 T 13-10-2018 IPR020287 Tail sheath protein, C-terminal domain Y11_13441 21414d15ae9970a5754c534c4426a118 389 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 108 273 6.2E-32 T 13-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain Y11_25211 21414d15ae9970a5754c534c4426a118 389 Pfam PF17482 Phage tail sheath C-terminal domain 274 376 3.9E-16 T 13-10-2018 IPR020287 Tail sheath protein, C-terminal domain Y11_25211 21414d15ae9970a5754c534c4426a118 389 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 108 273 6.2E-32 T 13-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain Y11_30751 181cde122ec4f05c2540666d83be1aaa 563 Pfam PF17392 Urocanase C-terminal domain 352 546 2.7E-92 T 13-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Y11_30751 181cde122ec4f05c2540666d83be1aaa 563 SUPERFAMILY SSF111326 7 555 1.7E-261 T 13-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Y11_30751 181cde122ec4f05c2540666d83be1aaa 563 Pfam PF17391 Urocanase N-terminal domain 12 138 1.4E-62 T 13-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Y11_30751 181cde122ec4f05c2540666d83be1aaa 563 Gene3D G3DSA:3.40.50.10730 142 349 3.5E-262 T 13-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Y11_30751 181cde122ec4f05c2540666d83be1aaa 563 Gene3D G3DSA:3.40.1770.10 17 542 3.5E-262 T 13-10-2018 Y11_30751 181cde122ec4f05c2540666d83be1aaa 563 Pfam PF01175 Urocanase Rossmann-like domain 141 349 2.7E-86 T 13-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Y11_30751 181cde122ec4f05c2540666d83be1aaa 563 Hamap MF_00577 Urocanate hydratase [hutU]. 3 556 50.293 T 13-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Y11_30751 181cde122ec4f05c2540666d83be1aaa 563 PIRSF PIRSF001423 2 561 2.8E-293 T 13-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Y11_30751 181cde122ec4f05c2540666d83be1aaa 563 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 554 0.0 T 13-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Y11_30751 181cde122ec4f05c2540666d83be1aaa 563 ProSitePatterns PS01233 Urocanase signature. 442 457 - T 13-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Y11_06041 719a21185b032964115ad15ae248235e 139 SUPERFAMILY SSF55729 31 137 7.77E-23 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_06041 719a21185b032964115ad15ae248235e 139 Gene3D G3DSA:3.40.630.30 35 137 2.5E-24 T 13-10-2018 Y11_06041 719a21185b032964115ad15ae248235e 139 Pfam PF00583 Acetyltransferase (GNAT) family 38 115 6.8E-11 T 13-10-2018 IPR000182 GNAT domain Y11_29671 d7aa6d3397abd8d4088cf3dd79586b5f 206 SUPERFAMILY SSF53335 4 204 1.29E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_29671 d7aa6d3397abd8d4088cf3dd79586b5f 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 202 28.553 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Y11_29671 d7aa6d3397abd8d4088cf3dd79586b5f 206 Gene3D G3DSA:3.40.50.150 1 206 1.0E-71 T 13-10-2018 Y11_29671 d7aa6d3397abd8d4088cf3dd79586b5f 206 PIRSF PIRSF003078 1 206 2.5E-61 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Y11_29671 d7aa6d3397abd8d4088cf3dd79586b5f 206 Pfam PF02527 rRNA small subunit methyltransferase G 20 201 7.6E-61 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Y11_29671 d7aa6d3397abd8d4088cf3dd79586b5f 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 204 1.1E-57 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Y11_14021 e6d58de5dbe6862fcbee0f072fc43062 381 Gene3D G3DSA:1.20.58.1830 1 59 2.3E-10 T 13-10-2018 Y11_14021 e6d58de5dbe6862fcbee0f072fc43062 381 SUPERFAMILY SSF64518 1 381 6.54E-97 T 13-10-2018 Y11_14021 e6d58de5dbe6862fcbee0f072fc43062 381 PRINTS PR00207 Flagellin signature 110 133 5.3E-30 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Y11_14021 e6d58de5dbe6862fcbee0f072fc43062 381 PRINTS PR00207 Flagellin signature 75 94 5.3E-30 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Y11_14021 e6d58de5dbe6862fcbee0f072fc43062 381 PRINTS PR00207 Flagellin signature 36 53 5.3E-30 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Y11_14021 e6d58de5dbe6862fcbee0f072fc43062 381 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 139 5.1E-42 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Y11_14021 e6d58de5dbe6862fcbee0f072fc43062 381 Gene3D G3DSA:3.30.70.3070 166 281 1.6E-58 T 13-10-2018 Y11_14021 e6d58de5dbe6862fcbee0f072fc43062 381 Gene3D G3DSA:1.20.1330.10 60 326 1.6E-58 T 13-10-2018 Y11_14021 e6d58de5dbe6862fcbee0f072fc43062 381 Pfam PF00700 Bacterial flagellin C-terminal helical region 296 380 3.0E-30 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Y11_14021 e6d58de5dbe6862fcbee0f072fc43062 381 Gene3D G3DSA:1.10.8.410 329 381 3.3E-23 T 13-10-2018 Y11_36381 ffa0a3da8b585883cb9e5e9cad8f9697 67 Gene3D G3DSA:3.30.1910.10 1 64 3.7E-27 T 13-10-2018 Y11_36381 ffa0a3da8b585883cb9e5e9cad8f9697 67 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 4.0E-30 T 13-10-2018 IPR009491 Protein of unknown function DUF1107 Y11_36381 ffa0a3da8b585883cb9e5e9cad8f9697 67 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 2.0E-29 T 13-10-2018 IPR009491 Protein of unknown function DUF1107 Y11_35221 f44998d7874e8272e748f9ed4f62ef94 71 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 4 70 2.9E-12 T 13-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 Y11_35221 f44998d7874e8272e748f9ed4f62ef94 71 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 4 69 2.6E-19 T 13-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 Y11_03331 f06e53711979e50e23108948700ba9ca 841 Gene3D G3DSA:2.60.40.3110 271 360 9.8E-36 T 13-10-2018 Y11_03331 f06e53711979e50e23108948700ba9ca 841 SUPERFAMILY SSF141729 29 161 2.88E-24 T 13-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 Y11_03331 f06e53711979e50e23108948700ba9ca 841 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 313 323 - T 13-10-2018 IPR018030 Fimbrial membrane usher, conserved site Y11_03331 f06e53711979e50e23108948700ba9ca 841 Pfam PF00577 Outer membrane usher protein 201 750 1.9E-179 T 13-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 Y11_03331 f06e53711979e50e23108948700ba9ca 841 Gene3D G3DSA:2.60.40.2610 665 755 2.2E-24 T 13-10-2018 Y11_03331 f06e53711979e50e23108948700ba9ca 841 Gene3D G3DSA:3.10.20.410 48 173 1.6E-37 T 13-10-2018 Y11_03331 f06e53711979e50e23108948700ba9ca 841 Gene3D G3DSA:2.60.40.2070 756 841 3.7E-27 T 13-10-2018 Y11_03331 f06e53711979e50e23108948700ba9ca 841 Pfam PF13953 PapC C-terminal domain 759 824 3.3E-23 T 13-10-2018 IPR025949 PapC-like, C-terminal domain Y11_03331 f06e53711979e50e23108948700ba9ca 841 Pfam PF13954 PapC N-terminal domain 30 184 1.1E-34 T 13-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 Y11_34231 51130fc62433fbf6a7531b2c94e0bf1d 160 Pfam PF03602 Conserved hypothetical protein 95 2 138 3.3E-39 T 13-10-2018 Y11_34231 51130fc62433fbf6a7531b2c94e0bf1d 160 Gene3D G3DSA:3.40.50.150 1 150 4.3E-41 T 13-10-2018 Y11_34231 51130fc62433fbf6a7531b2c94e0bf1d 160 PIRSF PIRSF004553 1 142 1.9E-38 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Y11_34231 51130fc62433fbf6a7531b2c94e0bf1d 160 SUPERFAMILY SSF53335 2 140 1.34E-36 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_34231 51130fc62433fbf6a7531b2c94e0bf1d 160 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 140 2.2E-40 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Y11_34231 51130fc62433fbf6a7531b2c94e0bf1d 160 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 75 81 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Y11_02111 ed32983fc0bf1533ad2a928e2bf1d6b5 611 Pfam PF02080 TrkA-C domain 232 298 5.6E-15 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Y11_02111 ed32983fc0bf1533ad2a928e2bf1d6b5 611 Pfam PF02080 TrkA-C domain 327 394 8.4E-13 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Y11_02111 ed32983fc0bf1533ad2a928e2bf1d6b5 611 Gene3D G3DSA:3.30.70.1450 324 398 2.5E-17 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_02111 ed32983fc0bf1533ad2a928e2bf1d6b5 611 SUPERFAMILY SSF116726 322 395 2.35E-18 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_02111 ed32983fc0bf1533ad2a928e2bf1d6b5 611 Gene3D G3DSA:3.30.70.1450 230 307 2.9E-13 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_02111 ed32983fc0bf1533ad2a928e2bf1d6b5 611 SUPERFAMILY SSF116726 233 290 1.14E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_02111 ed32983fc0bf1533ad2a928e2bf1d6b5 611 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 559 575 - T 13-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 Y11_02111 ed32983fc0bf1533ad2a928e2bf1d6b5 611 Pfam PF03600 Citrate transporter 431 603 8.7E-21 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Y11_02111 ed32983fc0bf1533ad2a928e2bf1d6b5 611 Pfam PF03600 Citrate transporter 16 197 2.7E-38 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Y11_13491 f8930bd8e1c3b39beddc83afd3cf8399 161 Pfam PF06995 Phage P2 GpU 6 125 1.6E-42 T 13-10-2018 IPR009734 Myoviridae, GpU Y11_13491 f8930bd8e1c3b39beddc83afd3cf8399 161 PIRSF PIRSF029208 1 152 1.2E-58 T 13-10-2018 IPR016912 Bacteriophage P2, GpU Y11_09271 5f9ad230b6889e89c7f49b00711bb986 541 SUPERFAMILY SSF52467 187 350 7.32E-54 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Y11_09271 5f9ad230b6889e89c7f49b00711bb986 541 SUPERFAMILY SSF52518 1 175 1.22E-59 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_09271 5f9ad230b6889e89c7f49b00711bb986 541 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 527 3.8E-189 T 13-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Y11_09271 5f9ad230b6889e89c7f49b00711bb986 541 Gene3D G3DSA:3.40.50.970 352 527 5.1E-113 T 13-10-2018 Y11_09271 5f9ad230b6889e89c7f49b00711bb986 541 Gene3D G3DSA:3.40.50.970 1 181 2.8E-68 T 13-10-2018 Y11_09271 5f9ad230b6889e89c7f49b00711bb986 541 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 419 438 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Y11_09271 5f9ad230b6889e89c7f49b00711bb986 541 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 382 527 2.3E-46 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Y11_09271 5f9ad230b6889e89c7f49b00711bb986 541 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 326 2.5E-42 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Y11_09271 5f9ad230b6889e89c7f49b00711bb986 541 SUPERFAMILY SSF52518 357 527 1.54E-58 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_09271 5f9ad230b6889e89c7f49b00711bb986 541 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 171 1.7E-58 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Y11_09271 5f9ad230b6889e89c7f49b00711bb986 541 Gene3D G3DSA:3.40.50.1220 192 351 5.1E-113 T 13-10-2018 Y11_34471 2e1cab42b5e1cf2f86c382cce174dd76 281 SUPERFAMILY SSF161098 4 277 2.62E-58 T 13-10-2018 IPR035906 MetI-like superfamily Y11_34471 2e1cab42b5e1cf2f86c382cce174dd76 281 Gene3D G3DSA:1.10.3720.10 2 274 3.2E-53 T 13-10-2018 IPR035906 MetI-like superfamily Y11_34471 2e1cab42b5e1cf2f86c382cce174dd76 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 276 8.7E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_14601 7169470473160452a16d8b3bf29efec6 557 SUPERFAMILY SSF58104 236 520 4.05E-76 T 13-10-2018 Y11_14601 7169470473160452a16d8b3bf29efec6 557 Pfam PF00672 HAMP domain 218 264 3.6E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_14601 7169470473160452a16d8b3bf29efec6 557 Pfam PF02203 Tar ligand binding domain homologue 1 176 4.2E-55 T 13-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 Y11_14601 7169470473160452a16d8b3bf29efec6 557 SMART SM00304 216 268 2.9E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_14601 7169470473160452a16d8b3bf29efec6 557 Gene3D G3DSA:1.10.287.950 216 518 2.9E-99 T 13-10-2018 Y11_14601 7169470473160452a16d8b3bf29efec6 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 1.0E-89 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14601 7169470473160452a16d8b3bf29efec6 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 1.0E-89 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14601 7169470473160452a16d8b3bf29efec6 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 1.0E-89 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14601 7169470473160452a16d8b3bf29efec6 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 1.0E-89 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14601 7169470473160452a16d8b3bf29efec6 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 1.0E-89 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14601 7169470473160452a16d8b3bf29efec6 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 1.0E-89 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14601 7169470473160452a16d8b3bf29efec6 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.0E-89 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14601 7169470473160452a16d8b3bf29efec6 557 SMART SM00283 269 516 5.6E-95 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_14601 7169470473160452a16d8b3bf29efec6 557 Gene3D G3DSA:1.20.120.30 22 194 1.5E-61 T 13-10-2018 Y11_14601 7169470473160452a16d8b3bf29efec6 557 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 13-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Y11_14601 7169470473160452a16d8b3bf29efec6 557 SMART SM00319 44 182 8.6E-46 T 13-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 Y11_14601 7169470473160452a16d8b3bf29efec6 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 4.3E-59 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_14601 7169470473160452a16d8b3bf29efec6 557 SUPERFAMILY SSF47170 25 182 3.66E-50 T 13-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Y11_03901 a01cada7dfe95279a5f7c4b300d499e1 649 Gene3D G3DSA:3.40.50.300 1 274 3.9E-70 T 13-10-2018 Y11_03901 a01cada7dfe95279a5f7c4b300d499e1 649 Pfam PF02687 FtsX-like permease family 554 642 3.8E-11 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Y11_03901 a01cada7dfe95279a5f7c4b300d499e1 649 Pfam PF00005 ABC transporter 24 172 2.8E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_03901 a01cada7dfe95279a5f7c4b300d499e1 649 SUPERFAMILY SSF52540 4 225 4.13E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_03901 a01cada7dfe95279a5f7c4b300d499e1 649 Pfam PF12704 MacB-like periplasmic core domain 273 491 1.1E-39 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Y11_03901 a01cada7dfe95279a5f7c4b300d499e1 649 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_03901 a01cada7dfe95279a5f7c4b300d499e1 649 SMART SM00382 33 220 1.1E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_27991 62cc5f3c3354413cfadcd8911d371a7e 443 Gene3D G3DSA:1.10.287.470 100 167 1.8E-9 T 13-10-2018 Y11_27991 62cc5f3c3354413cfadcd8911d371a7e 443 SUPERFAMILY SSF111369 66 125 6.41E-5 T 13-10-2018 Y11_27991 62cc5f3c3354413cfadcd8911d371a7e 443 Gene3D G3DSA:2.40.30.170 336 420 5.4E-17 T 13-10-2018 Y11_27991 62cc5f3c3354413cfadcd8911d371a7e 443 Gene3D G3DSA:1.10.287.470 219 298 5.4E-17 T 13-10-2018 Y11_27991 62cc5f3c3354413cfadcd8911d371a7e 443 Gene3D G3DSA:2.40.50.100 299 335 5.4E-17 T 13-10-2018 Y11_27991 62cc5f3c3354413cfadcd8911d371a7e 443 Gene3D G3DSA:2.40.50.100 66 99 1.8E-9 T 13-10-2018 Y11_27991 62cc5f3c3354413cfadcd8911d371a7e 443 Pfam PF13437 HlyD family secretion protein 299 410 3.7E-12 T 13-10-2018 Y11_27991 62cc5f3c3354413cfadcd8911d371a7e 443 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 30 443 6.5E-108 T 13-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 Y11_27991 62cc5f3c3354413cfadcd8911d371a7e 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 311 332 1.5E-49 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_27991 62cc5f3c3354413cfadcd8911d371a7e 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 422 442 1.5E-49 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_27991 62cc5f3c3354413cfadcd8911d371a7e 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 344 368 1.5E-49 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_27991 62cc5f3c3354413cfadcd8911d371a7e 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 36 59 1.5E-49 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_27991 62cc5f3c3354413cfadcd8911d371a7e 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 407 422 1.5E-49 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_27991 62cc5f3c3354413cfadcd8911d371a7e 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 78 98 1.5E-49 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_27991 62cc5f3c3354413cfadcd8911d371a7e 443 Pfam PF13533 Biotin-lipoyl like 70 112 1.3E-8 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Y11_27991 62cc5f3c3354413cfadcd8911d371a7e 443 SUPERFAMILY SSF111369 260 342 2.35E-5 T 13-10-2018 Y11_23921 f596c962b2c03234329d7537568a1818 259 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 13 255 5.5E-85 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Y11_23921 f596c962b2c03234329d7537568a1818 259 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 91 108 9.1E-40 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Y11_23921 f596c962b2c03234329d7537568a1818 259 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 65 73 9.1E-40 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Y11_23921 f596c962b2c03234329d7537568a1818 259 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 34 55 9.1E-40 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Y11_23921 f596c962b2c03234329d7537568a1818 259 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 121 135 9.1E-40 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Y11_23921 f596c962b2c03234329d7537568a1818 259 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 165 182 9.1E-40 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Y11_23921 f596c962b2c03234329d7537568a1818 259 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 21 28 9.1E-40 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Y11_23921 f596c962b2c03234329d7537568a1818 259 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 15 258 29.847 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Y11_23921 f596c962b2c03234329d7537568a1818 259 Pfam PF02110 Hydroxyethylthiazole kinase family 13 255 7.3E-89 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Y11_23921 f596c962b2c03234329d7537568a1818 259 Gene3D G3DSA:3.40.1190.20 6 259 1.8E-88 T 13-10-2018 IPR029056 Ribokinase-like Y11_23921 f596c962b2c03234329d7537568a1818 259 PIRSF PIRSF000513 8 259 9.9E-92 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Y11_23921 f596c962b2c03234329d7537568a1818 259 SUPERFAMILY SSF53613 9 254 1.08E-57 T 13-10-2018 IPR029056 Ribokinase-like Y11_24651 e24e23c2e283e3118f9310151cbaea42 293 Pfam PF00482 Type II secretion system (T2SS), protein F 129 250 4.5E-16 T 13-10-2018 IPR018076 Type II secretion system F domain Y11_39371 e346f44bc5c33e5d70d288ceecb1b941 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 30.309 T 13-10-2018 IPR008249 Uncharacterised protein family UPF0231 Y11_39371 e346f44bc5c33e5d70d288ceecb1b941 120 PIRSF PIRSF006287 1 120 4.6E-51 T 13-10-2018 IPR008249 Uncharacterised protein family UPF0231 Y11_39371 e346f44bc5c33e5d70d288ceecb1b941 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 1.3E-45 T 13-10-2018 IPR008249 Uncharacterised protein family UPF0231 Y11_39371 e346f44bc5c33e5d70d288ceecb1b941 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 8.0E-57 T 13-10-2018 IPR008249 Uncharacterised protein family UPF0231 Y11_12551 35cea9e4744c40c9ff6735557cabbda7 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.151 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Y11_12551 35cea9e4744c40c9ff6735557cabbda7 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 6.2E-174 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Y11_12551 35cea9e4744c40c9ff6735557cabbda7 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Y11_12551 35cea9e4744c40c9ff6735557cabbda7 360 SMART SM00937 63 178 5.5E-72 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 Y11_12551 35cea9e4744c40c9ff6735557cabbda7 360 Pfam PF03462 PCRF domain 12 203 7.0E-76 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 Y11_12551 35cea9e4744c40c9ff6735557cabbda7 360 SUPERFAMILY SSF75620 12 353 6.67E-137 T 13-10-2018 Y11_12551 35cea9e4744c40c9ff6735557cabbda7 360 Gene3D G3DSA:1.20.58.410 2 101 4.1E-6 T 13-10-2018 Y11_12551 35cea9e4744c40c9ff6735557cabbda7 360 Gene3D G3DSA:3.30.70.1660 111 342 2.2E-94 T 13-10-2018 Y11_12551 35cea9e4744c40c9ff6735557cabbda7 360 Gene3D G3DSA:3.30.160.20 210 297 2.2E-94 T 13-10-2018 Y11_12551 35cea9e4744c40c9ff6735557cabbda7 360 Pfam PF00472 RF-1 domain 216 321 8.3E-41 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Y11_00581 f6d37facbfabd6cd0463c6ea9d7cf688 292 Gene3D G3DSA:3.40.50.10490 108 290 1.4E-47 T 13-10-2018 Y11_00581 f6d37facbfabd6cd0463c6ea9d7cf688 292 Pfam PF01418 Helix-turn-helix domain, rpiR family 13 86 1.7E-22 T 13-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Y11_00581 f6d37facbfabd6cd0463c6ea9d7cf688 292 Gene3D G3DSA:1.10.10.10 9 89 3.6E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_00581 f6d37facbfabd6cd0463c6ea9d7cf688 292 Pfam PF01380 SIS domain 138 265 1.1E-19 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_00581 f6d37facbfabd6cd0463c6ea9d7cf688 292 SUPERFAMILY SSF46689 12 86 1.97E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_00581 f6d37facbfabd6cd0463c6ea9d7cf688 292 SUPERFAMILY SSF53697 104 289 3.27E-44 T 13-10-2018 Y11_03711 bbe8b3d379a297426fdf2fdf65ea80f5 375 Gene3D G3DSA:3.40.50.150 14 368 6.9E-76 T 13-10-2018 Y11_03711 bbe8b3d379a297426fdf2fdf65ea80f5 375 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site Y11_03711 bbe8b3d379a297426fdf2fdf65ea80f5 375 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 13-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site Y11_03711 bbe8b3d379a297426fdf2fdf65ea80f5 375 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 81.034 T 13-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 Y11_03711 bbe8b3d379a297426fdf2fdf65ea80f5 375 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 3 367 3.2E-57 T 13-10-2018 Y11_03711 bbe8b3d379a297426fdf2fdf65ea80f5 375 Gene3D G3DSA:3.40.1350.30 56 211 6.9E-76 T 13-10-2018 Y11_03711 bbe8b3d379a297426fdf2fdf65ea80f5 375 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 374 8.0E-214 T 13-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 Y11_03711 bbe8b3d379a297426fdf2fdf65ea80f5 375 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 21 374 1.1E-19 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Y11_03711 bbe8b3d379a297426fdf2fdf65ea80f5 375 SUPERFAMILY SSF53335 4 374 5.53E-56 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_30991 c26415347c80fe7aec9e2fadce378571 570 Pfam PF17287 POTRA domain 174 218 3.0E-15 T 13-10-2018 IPR035251 ShlB, POTRA domain Y11_30991 c26415347c80fe7aec9e2fadce378571 570 PIRSF PIRSF029745 16 570 1.1E-141 T 13-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 Y11_30991 c26415347c80fe7aec9e2fadce378571 570 Pfam PF08479 POTRA domain, ShlB-type 89 164 2.2E-12 T 13-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type Y11_30991 c26415347c80fe7aec9e2fadce378571 570 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 226 534 9.1E-80 T 13-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal Y11_30991 c26415347c80fe7aec9e2fadce378571 570 Gene3D G3DSA:2.40.160.50 197 570 2.8E-73 T 13-10-2018 Y11_28201 475f6ebcdb7e8b10ca9d93af01e64aa3 289 SUPERFAMILY SSF110997 215 284 2.75E-21 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Y11_28201 475f6ebcdb7e8b10ca9d93af01e64aa3 289 Pfam PF05036 Sporulation related domain 215 283 7.6E-20 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Y11_28201 475f6ebcdb7e8b10ca9d93af01e64aa3 289 Gene3D G3DSA:3.30.70.1070 210 289 7.6E-31 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Y11_28201 475f6ebcdb7e8b10ca9d93af01e64aa3 289 Hamap MF_02039 Cell division protein FtsN [ftsN]. 33 289 35.215 T 13-10-2018 IPR011930 Cell division protein FtsN GO:0005515 Y11_28201 475f6ebcdb7e8b10ca9d93af01e64aa3 289 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 283 1.1E-79 T 13-10-2018 IPR011930 Cell division protein FtsN GO:0005515 Y11_08661 7b71f8f10b32685498f49f60122e51ae 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 454 3.8E-89 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain Y11_08661 7b71f8f10b32685498f49f60122e51ae 545 PIRSF PIRSF002741 1 537 1.7E-101 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Y11_08661 7b71f8f10b32685498f49f60122e51ae 545 SUPERFAMILY SSF53850 33 533 9.23E-140 T 13-10-2018 Y11_08661 7b71f8f10b32685498f49f60122e51ae 545 Gene3D G3DSA:3.90.76.10 43 215 2.9E-153 T 13-10-2018 Y11_08661 7b71f8f10b32685498f49f60122e51ae 545 Gene3D G3DSA:3.40.190.10 216 524 2.9E-153 T 13-10-2018 Y11_08661 7b71f8f10b32685498f49f60122e51ae 545 Gene3D G3DSA:3.10.105.10 295 512 2.9E-153 T 13-10-2018 Y11_08661 7b71f8f10b32685498f49f60122e51ae 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 81 103 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site Y11_16221 5561834c84615590abaf6a11341630a3 91 SUPERFAMILY SSF143414 3 89 8.5E-33 T 13-10-2018 IPR037233 CcmK-like superfamily Y11_16221 5561834c84615590abaf6a11341630a3 91 SMART SM00877 3 79 1.8E-38 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Y11_16221 5561834c84615590abaf6a11341630a3 91 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 47 2.0E-16 T 13-10-2018 Y11_16221 5561834c84615590abaf6a11341630a3 91 Gene3D G3DSA:3.30.70.1710 1 91 1.7E-41 T 13-10-2018 Y11_16221 5561834c84615590abaf6a11341630a3 91 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 13-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Y11_16221 5561834c84615590abaf6a11341630a3 91 Pfam PF00936 BMC domain 4 79 1.3E-29 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Y11_22531 bc3e7e0ab97579a6dbe3394e04279145 416 SUPERFAMILY SSF53901 8 258 1.63E-43 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_22531 bc3e7e0ab97579a6dbe3394e04279145 416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 159 175 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site Y11_22531 bc3e7e0ab97579a6dbe3394e04279145 416 Gene3D G3DSA:3.40.47.10 263 415 3.5E-43 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_22531 bc3e7e0ab97579a6dbe3394e04279145 416 SUPERFAMILY SSF53901 220 413 7.12E-60 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_22531 bc3e7e0ab97579a6dbe3394e04279145 416 SMART SM00825 Beta-ketoacyl synthase 10 414 6.5E-8 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Y11_22531 bc3e7e0ab97579a6dbe3394e04279145 416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 8 249 3.8E-30 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Y11_22531 bc3e7e0ab97579a6dbe3394e04279145 416 Gene3D G3DSA:3.40.47.10 1 260 4.9E-50 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_22531 bc3e7e0ab97579a6dbe3394e04279145 416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 259 373 1.6E-30 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Y11_37111 dd22c1b690e949597117fb1303ab24c9 193 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 189 6.5E-52 T 13-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 Y11_37111 dd22c1b690e949597117fb1303ab24c9 193 PIRSF PIRSF020680 1 193 9.7E-55 T 13-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 Y11_37111 dd22c1b690e949597117fb1303ab24c9 193 Gene3D G3DSA:3.40.50.11310 1 193 3.3E-61 T 13-10-2018 IPR038058 PhnH-like superfamily Y11_37111 dd22c1b690e949597117fb1303ab24c9 193 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 191 4.0E-60 T 13-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 Y11_37111 dd22c1b690e949597117fb1303ab24c9 193 SUPERFAMILY SSF159709 13 192 2.22E-54 T 13-10-2018 IPR038058 PhnH-like superfamily Y11_04291 f6835398e10456b8bfce80aea95167a4 69 PIRSF PIRSF002599 1 69 1.3E-17 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 Y11_04291 f6835398e10456b8bfce80aea95167a4 69 SUPERFAMILY SSF50249 3 67 3.43E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_04291 f6835398e10456b8bfce80aea95167a4 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 1.7E-19 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_04291 f6835398e10456b8bfce80aea95167a4 69 PRINTS PR00050 Cold shock protein signature 42 60 3.2E-11 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_04291 f6835398e10456b8bfce80aea95167a4 69 PRINTS PR00050 Cold shock protein signature 6 21 3.2E-11 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_04291 f6835398e10456b8bfce80aea95167a4 69 PRINTS PR00050 Cold shock protein signature 27 36 3.2E-11 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_04291 f6835398e10456b8bfce80aea95167a4 69 SMART SM00357 5 69 6.5E-12 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Y11_04291 f6835398e10456b8bfce80aea95167a4 69 Gene3D G3DSA:2.40.50.140 5 68 2.1E-20 T 13-10-2018 Y11_17431 f38fad349927db82e609de110a4dc484 186 Pfam PF02469 Fasciclin domain 50 185 1.7E-31 T 13-10-2018 IPR000782 FAS1 domain Y11_17431 f38fad349927db82e609de110a4dc484 186 Gene3D G3DSA:2.30.180.10 38 186 2.6E-43 T 13-10-2018 IPR036378 FAS1 domain superfamily Y11_17431 f38fad349927db82e609de110a4dc484 186 SMART SM00554 74 186 8.3E-24 T 13-10-2018 IPR000782 FAS1 domain Y11_17431 f38fad349927db82e609de110a4dc484 186 SUPERFAMILY SSF82153 39 185 1.83E-38 T 13-10-2018 IPR036378 FAS1 domain superfamily Y11_28381 be7dccf2c62ee323d285be7a35e99655 329 Pfam PF13531 Bacterial extracellular solute-binding protein 31 280 4.8E-46 T 13-10-2018 Y11_28381 be7dccf2c62ee323d285be7a35e99655 329 Gene3D G3DSA:3.40.190.10 114 325 4.8E-139 T 13-10-2018 Y11_28381 be7dccf2c62ee323d285be7a35e99655 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 13 326 2.3E-175 T 13-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 Y11_28381 be7dccf2c62ee323d285be7a35e99655 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 13-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 Y11_28381 be7dccf2c62ee323d285be7a35e99655 329 Gene3D G3DSA:3.40.190.10 27 295 4.8E-139 T 13-10-2018 Y11_28381 be7dccf2c62ee323d285be7a35e99655 329 SUPERFAMILY SSF53850 21 326 5.91E-92 T 13-10-2018 Y11_08211 df2f173cb104dc3d74e87e2bf817e583 437 Pfam PF01458 Uncharacterized protein family (UPF0051) 184 407 3.5E-71 T 13-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 Y11_08211 df2f173cb104dc3d74e87e2bf817e583 437 SUPERFAMILY SSF101960 42 433 6.02E-109 T 13-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Y11_08211 df2f173cb104dc3d74e87e2bf817e583 437 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 147 422 2.6E-88 T 13-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 Y11_25821 b00e4cdce46c604096f9d5d625cafcae 496 SMART SM00858 11 82 1.4E-11 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Y11_25821 b00e4cdce46c604096f9d5d625cafcae 496 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 108 495 5.7E-154 T 13-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 Y11_25821 b00e4cdce46c604096f9d5d625cafcae 496 Gene3D G3DSA:3.90.1210.30 3 85 8.9E-25 T 13-10-2018 Y11_25821 b00e4cdce46c604096f9d5d625cafcae 496 Pfam PF08666 SAF domain 11 80 5.7E-12 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Y11_31061 6daea61efd5d2c57f5a86011191d8af7 563 SUPERFAMILY SSF53649 250 542 3.18E-16 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Y11_31061 6daea61efd5d2c57f5a86011191d8af7 563 Pfam PF08019 Domain of unknown function (DUF1705) 56 180 7.0E-18 T 13-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 Y11_31061 6daea61efd5d2c57f5a86011191d8af7 563 Gene3D G3DSA:3.40.720.10 244 553 1.6E-57 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Y11_31061 6daea61efd5d2c57f5a86011191d8af7 563 Pfam PF00884 Sulfatase 250 538 6.7E-41 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Y11_36341 b78d601c6af85f92b12bb7e15a3810c1 221 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 221 47.517 T 13-10-2018 IPR023742 Iron-sulfur cluster repair protein YftE GO:0030091 Y11_36341 b78d601c6af85f92b12bb7e15a3810c1 221 Pfam PF04405 Domain of Unknown function (DUF542) 5 59 2.6E-20 T 13-10-2018 IPR019903 Repair of iron centres family Y11_36341 b78d601c6af85f92b12bb7e15a3810c1 221 Gene3D G3DSA:1.20.120.520 80 220 3.0E-30 T 13-10-2018 Y11_36341 b78d601c6af85f92b12bb7e15a3810c1 221 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 217 3.3E-82 T 13-10-2018 IPR019903 Repair of iron centres family Y11_36341 b78d601c6af85f92b12bb7e15a3810c1 221 Pfam PF01814 Hemerythrin HHE cation binding domain 81 217 1.3E-26 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Y11_42051 db219d990e6285940d7e3d26f2e9370f 276 Gene3D G3DSA:2.60.120.10 4 97 3.2E-9 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_42051 db219d990e6285940d7e3d26f2e9370f 276 SMART SM00342 182 264 6.9E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_42051 db219d990e6285940d7e3d26f2e9370f 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 218 260 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Y11_42051 db219d990e6285940d7e3d26f2e9370f 276 SUPERFAMILY SSF51182 7 88 1.31E-12 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_42051 db219d990e6285940d7e3d26f2e9370f 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 3.6E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_42051 db219d990e6285940d7e3d26f2e9370f 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 3.6E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_42051 db219d990e6285940d7e3d26f2e9370f 276 Pfam PF07883 Cupin domain 21 73 8.3E-7 T 13-10-2018 IPR013096 Cupin 2, conserved barrel Y11_42051 db219d990e6285940d7e3d26f2e9370f 276 SUPERFAMILY SSF46689 217 267 1.39E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_42051 db219d990e6285940d7e3d26f2e9370f 276 Gene3D G3DSA:1.10.10.60 180 269 2.0E-18 T 13-10-2018 Y11_42051 db219d990e6285940d7e3d26f2e9370f 276 Pfam PF12833 Helix-turn-helix domain 192 265 6.9E-16 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_31701 5aa08da4212d03e3f2bea16efd7b5218 646 Gene3D G3DSA:3.40.50.970 416 613 1.2E-44 T 13-10-2018 Y11_31701 5aa08da4212d03e3f2bea16efd7b5218 646 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 442 601 2.2E-39 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Y11_31701 5aa08da4212d03e3f2bea16efd7b5218 646 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 353 3.7E-30 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Y11_31701 5aa08da4212d03e3f2bea16efd7b5218 646 Gene3D G3DSA:3.40.50.1220 214 393 6.8E-34 T 13-10-2018 Y11_31701 5aa08da4212d03e3f2bea16efd7b5218 646 SUPERFAMILY SSF52467 185 371 5.46E-40 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Y11_31701 5aa08da4212d03e3f2bea16efd7b5218 646 SUPERFAMILY SSF52518 419 631 1.18E-52 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_31701 5aa08da4212d03e3f2bea16efd7b5218 646 SUPERFAMILY SSF52518 2 208 9.36E-31 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_31701 5aa08da4212d03e3f2bea16efd7b5218 646 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 644 1.4E-288 T 13-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 Y11_31701 5aa08da4212d03e3f2bea16efd7b5218 646 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 478 497 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Y11_31701 5aa08da4212d03e3f2bea16efd7b5218 646 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 196 1.2E-31 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Y11_31701 5aa08da4212d03e3f2bea16efd7b5218 646 Gene3D G3DSA:3.40.50.970 1 209 3.6E-31 T 13-10-2018 Y11_19201 56bcf1bb9d1953fe6afb3edf03b65a6b 344 Pfam PF06144 DNA polymerase III, delta subunit 21 190 3.8E-43 T 13-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 Y11_19201 56bcf1bb9d1953fe6afb3edf03b65a6b 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 2.5E-101 T 13-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 Y11_19201 56bcf1bb9d1953fe6afb3edf03b65a6b 344 Gene3D G3DSA:1.20.272.10 214 343 5.3E-48 T 13-10-2018 Y11_19201 56bcf1bb9d1953fe6afb3edf03b65a6b 344 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 337 1.9E-61 T 13-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_19201 56bcf1bb9d1953fe6afb3edf03b65a6b 344 SUPERFAMILY SSF52540 1 210 6.54E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_19201 56bcf1bb9d1953fe6afb3edf03b65a6b 344 Gene3D G3DSA:1.10.8.60 143 213 2.1E-26 T 13-10-2018 Y11_19201 56bcf1bb9d1953fe6afb3edf03b65a6b 344 Gene3D G3DSA:3.40.50.300 1 140 7.5E-46 T 13-10-2018 Y11_19201 56bcf1bb9d1953fe6afb3edf03b65a6b 344 SUPERFAMILY SSF48019 212 333 1.87E-36 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Y11_24431 ed1933fe5b66c472eff5b1fdc73538ae 647 SUPERFAMILY SSF56954 39 344 2.35E-20 T 13-10-2018 Y11_24431 ed1933fe5b66c472eff5b1fdc73538ae 647 Gene3D G3DSA:1.10.287.470 456 531 1.2E-6 T 13-10-2018 Y11_24431 ed1933fe5b66c472eff5b1fdc73538ae 647 Gene3D G3DSA:2.40.50.100 426 563 1.2E-6 T 13-10-2018 Y11_24431 ed1933fe5b66c472eff5b1fdc73538ae 647 Gene3D G3DSA:1.20.1600.10 31 356 2.0E-19 T 13-10-2018 Y11_24431 ed1933fe5b66c472eff5b1fdc73538ae 647 Pfam PF02321 Outer membrane efflux protein 43 200 6.8E-9 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Y11_24431 ed1933fe5b66c472eff5b1fdc73538ae 647 Gene3D G3DSA:2.40.30.170 564 577 1.2E-6 T 13-10-2018 Y11_22791 b9bdfe7fa191b7d975a54defdba46b5b 162 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 158 36.593 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Y11_22791 b9bdfe7fa191b7d975a54defdba46b5b 162 SUPERFAMILY SSF69765 1 159 2.88E-64 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Y11_22791 b9bdfe7fa191b7d975a54defdba46b5b 162 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 158 5.8E-69 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Y11_22791 b9bdfe7fa191b7d975a54defdba46b5b 162 Gene3D G3DSA:3.30.1330.50 1 162 6.9E-71 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Y11_22791 b9bdfe7fa191b7d975a54defdba46b5b 162 Pfam PF02542 YgbB family 1 156 3.2E-65 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Y11_22791 b9bdfe7fa191b7d975a54defdba46b5b 162 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 37 52 - T 13-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Y11_19031 173f6dc52ef179f000c231340d2fdea9 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 9.1E-63 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Y11_19031 173f6dc52ef179f000c231340d2fdea9 250 SUPERFAMILY SSF56784 1 247 7.75E-65 T 13-10-2018 IPR036412 HAD-like superfamily Y11_19031 173f6dc52ef179f000c231340d2fdea9 250 Gene3D G3DSA:3.40.50.1000 71 174 2.0E-83 T 13-10-2018 IPR023214 HAD superfamily Y11_19031 173f6dc52ef179f000c231340d2fdea9 250 Gene3D G3DSA:3.40.50.1000 6 232 2.0E-83 T 13-10-2018 IPR023214 HAD superfamily Y11_19031 173f6dc52ef179f000c231340d2fdea9 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 1.4E-23 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Y11_19031 173f6dc52ef179f000c231340d2fdea9 250 Pfam PF13242 HAD-hyrolase-like 174 246 2.8E-20 T 13-10-2018 Y11_03391 243c43a6c3ca1aaba318d96c23661b38 508 Pfam PF00324 Amino acid permease 25 478 1.8E-142 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Y11_03391 243c43a6c3ca1aaba318d96c23661b38 508 Gene3D G3DSA:1.20.1740.10 16 486 7.3E-64 T 13-10-2018 Y11_03391 243c43a6c3ca1aaba318d96c23661b38 508 PIRSF PIRSF006060 3 497 3.7E-82 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_03391 243c43a6c3ca1aaba318d96c23661b38 508 ProSitePatterns PS00218 Amino acid permeases signature. 50 81 - T 13-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 Y11_42511 83811b7d698c9ea2b8e00283ea5fd3cd 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 297 8.6E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_42511 83811b7d698c9ea2b8e00283ea5fd3cd 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 8.6E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_42511 83811b7d698c9ea2b8e00283ea5fd3cd 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 8.6E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_42511 83811b7d698c9ea2b8e00283ea5fd3cd 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 8.6E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_42511 83811b7d698c9ea2b8e00283ea5fd3cd 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 455 4.7E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_42511 83811b7d698c9ea2b8e00283ea5fd3cd 459 SUPERFAMILY SSF47384 216 297 1.28E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_42511 83811b7d698c9ea2b8e00283ea5fd3cd 459 Gene3D G3DSA:3.30.565.10 305 459 7.7E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_42511 83811b7d698c9ea2b8e00283ea5fd3cd 459 Gene3D G3DSA:1.10.287.130 177 297 5.9E-17 T 13-10-2018 Y11_42511 83811b7d698c9ea2b8e00283ea5fd3cd 459 SMART SM00387 344 456 9.6E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_42511 83811b7d698c9ea2b8e00283ea5fd3cd 459 SUPERFAMILY SSF55874 305 454 1.96E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_42511 83811b7d698c9ea2b8e00283ea5fd3cd 459 SMART SM00388 233 301 8.3E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_31051 fbc5223d379b46ad65a90630de4a4c8c 196 SMART SM00448 3 113 7.2E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_31051 fbc5223d379b46ad65a90630de4a4c8c 196 Pfam PF00072 Response regulator receiver domain 5 114 5.2E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_31051 fbc5223d379b46ad65a90630de4a4c8c 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 1.5E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_31051 fbc5223d379b46ad65a90630de4a4c8c 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 1.5E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_31051 fbc5223d379b46ad65a90630de4a4c8c 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 1.5E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_31051 fbc5223d379b46ad65a90630de4a4c8c 196 SUPERFAMILY SSF46894 125 194 1.12E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_31051 fbc5223d379b46ad65a90630de4a4c8c 196 SUPERFAMILY SSF52172 2 123 2.28E-24 T 13-10-2018 IPR011006 CheY-like superfamily Y11_31051 fbc5223d379b46ad65a90630de4a4c8c 196 Gene3D G3DSA:3.40.50.12740 4 195 4.8E-50 T 13-10-2018 Y11_31051 fbc5223d379b46ad65a90630de4a4c8c 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 190 2.7E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_31051 fbc5223d379b46ad65a90630de4a4c8c 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_31051 fbc5223d379b46ad65a90630de4a4c8c 196 SMART SM00421 136 193 1.9E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_02351 34324abef6419c48b2059a677f6c66fc 330 SMART SM00354 5 75 1.6E-18 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_02351 34324abef6419c48b2059a677f6c66fc 330 Gene3D G3DSA:3.40.50.2300 161 292 1.4E-57 T 13-10-2018 Y11_02351 34324abef6419c48b2059a677f6c66fc 330 Gene3D G3DSA:1.10.260.40 1 61 1.0E-15 T 13-10-2018 Y11_02351 34324abef6419c48b2059a677f6c66fc 330 Gene3D G3DSA:3.40.50.2300 67 309 1.4E-57 T 13-10-2018 Y11_02351 34324abef6419c48b2059a677f6c66fc 330 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 311 3.9E-24 T 13-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain Y11_02351 34324abef6419c48b2059a677f6c66fc 330 SUPERFAMILY SSF53822 62 317 1.16E-51 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_02351 34324abef6419c48b2059a677f6c66fc 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 50 1.7E-17 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_02351 34324abef6419c48b2059a677f6c66fc 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 13-10-2018 Y11_02351 34324abef6419c48b2059a677f6c66fc 330 SUPERFAMILY SSF47413 4 53 9.64E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_36351 ee29d66e8aa7b878630cde4b86fa28cf 653 PRINTS PR01607 Apyrase family signature 535 554 1.1E-31 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_36351 ee29d66e8aa7b878630cde4b86fa28cf 653 PRINTS PR01607 Apyrase family signature 288 308 1.1E-31 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_36351 ee29d66e8aa7b878630cde4b86fa28cf 653 PRINTS PR01607 Apyrase family signature 27 45 1.1E-31 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_36351 ee29d66e8aa7b878630cde4b86fa28cf 653 PRINTS PR01607 Apyrase family signature 248 271 1.1E-31 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_36351 ee29d66e8aa7b878630cde4b86fa28cf 653 PRINTS PR01607 Apyrase family signature 220 237 1.1E-31 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_36351 ee29d66e8aa7b878630cde4b86fa28cf 653 PRINTS PR01607 Apyrase family signature 433 456 1.1E-31 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_36351 ee29d66e8aa7b878630cde4b86fa28cf 653 Gene3D G3DSA:3.90.780.10 408 594 8.8E-50 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_36351 ee29d66e8aa7b878630cde4b86fa28cf 653 Pfam PF00149 Calcineurin-like phosphoesterase 29 264 4.6E-11 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Y11_36351 ee29d66e8aa7b878630cde4b86fa28cf 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 114 125 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_36351 ee29d66e8aa7b878630cde4b86fa28cf 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 361 555 1.5E-20 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_36351 ee29d66e8aa7b878630cde4b86fa28cf 653 ProSitePatterns PS00785 5'-nucleotidase signature 1. 29 41 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_36351 ee29d66e8aa7b878630cde4b86fa28cf 653 SUPERFAMILY SSF55816 360 601 3.01E-38 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_36351 ee29d66e8aa7b878630cde4b86fa28cf 653 SUPERFAMILY SSF56300 22 358 1.34E-86 T 13-10-2018 Y11_36351 ee29d66e8aa7b878630cde4b86fa28cf 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 27 652 0.0 T 13-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 Y11_36351 ee29d66e8aa7b878630cde4b86fa28cf 653 Gene3D G3DSA:3.60.21.10 20 359 2.7E-146 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Y11_40221 929ea94ee09bf2034991abf598113d03 414 Gene3D G3DSA:3.30.450.20 138 254 3.6E-17 T 13-10-2018 Y11_40221 929ea94ee09bf2034991abf598113d03 414 Pfam PF08448 PAS fold 152 248 2.7E-8 T 13-10-2018 IPR013656 PAS fold-4 Y11_40221 929ea94ee09bf2034991abf598113d03 414 SMART SM00267 246 414 1.8E-58 T 13-10-2018 IPR000160 GGDEF domain Y11_40221 929ea94ee09bf2034991abf598113d03 414 SUPERFAMILY SSF55785 153 254 6.93E-17 T 13-10-2018 IPR035965 PAS domain superfamily Y11_40221 929ea94ee09bf2034991abf598113d03 414 SUPERFAMILY SSF55073 262 412 6.67E-47 T 13-10-2018 IPR029787 Nucleotide cyclase Y11_40221 929ea94ee09bf2034991abf598113d03 414 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 412 4.7E-47 T 13-10-2018 IPR000160 GGDEF domain Y11_40221 929ea94ee09bf2034991abf598113d03 414 Gene3D G3DSA:3.30.70.270 255 413 8.5E-53 T 13-10-2018 Y11_40221 929ea94ee09bf2034991abf598113d03 414 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 130 253 1.8E-15 T 13-10-2018 IPR000014 PAS domain Y11_40221 929ea94ee09bf2034991abf598113d03 414 SMART SM00091 133 202 2.9E-5 T 13-10-2018 IPR000014 PAS domain Y11_40221 929ea94ee09bf2034991abf598113d03 414 SMART SM00091 3 73 76.0 T 13-10-2018 IPR000014 PAS domain Y11_40221 929ea94ee09bf2034991abf598113d03 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 258 410 7.9E-46 T 13-10-2018 IPR000160 GGDEF domain Y11_15521 8341b26a833f26ccb0da05610b570831 253 SUPERFAMILY SSF46785 5 62 1.8E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_15521 8341b26a833f26ccb0da05610b570831 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.7E-7 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_15521 8341b26a833f26ccb0da05610b570831 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.7E-7 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_15521 8341b26a833f26ccb0da05610b570831 253 SMART SM01134 72 233 1.7E-56 T 13-10-2018 Y11_15521 8341b26a833f26ccb0da05610b570831 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Y11_15521 8341b26a833f26ccb0da05610b570831 253 SMART SM00420 6 58 6.1E-15 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_15521 8341b26a833f26ccb0da05610b570831 253 SUPERFAMILY SSF100950 74 233 8.58E-26 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_15521 8341b26a833f26ccb0da05610b570831 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 4.1E-15 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_15521 8341b26a833f26ccb0da05610b570831 253 Pfam PF00455 DeoR C terminal sensor domain 74 232 4.1E-40 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain Y11_15521 8341b26a833f26ccb0da05610b570831 253 Gene3D G3DSA:1.10.10.10 1 55 6.0E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_08441 7aaa32880535614b7911417fc0605812 143 Gene3D G3DSA:1.10.10.10 1 143 1.1E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_08441 7aaa32880535614b7911417fc0605812 143 Pfam PF01047 MarR family 29 87 5.2E-17 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Y11_08441 7aaa32880535614b7911417fc0605812 143 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Y11_08441 7aaa32880535614b7911417fc0605812 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 4.3E-26 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Y11_08441 7aaa32880535614b7911417fc0605812 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 4.3E-26 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Y11_08441 7aaa32880535614b7911417fc0605812 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 4.3E-26 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Y11_08441 7aaa32880535614b7911417fc0605812 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 4.3E-26 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Y11_08441 7aaa32880535614b7911417fc0605812 143 SUPERFAMILY SSF46785 4 139 7.63E-33 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_08441 7aaa32880535614b7911417fc0605812 143 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 1 143 37.007 T 13-10-2018 IPR023071 Transcriptional regulator, SlyA Y11_08441 7aaa32880535614b7911417fc0605812 143 SMART SM00347 22 123 1.2E-26 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Y11_29511 58d320a004c9dbbc1fddab66ea6861da 456 Gene3D G3DSA:1.20.1720.10 1 226 1.4E-42 T 13-10-2018 Y11_29511 58d320a004c9dbbc1fddab66ea6861da 456 Gene3D G3DSA:1.20.1250.20 236 434 1.8E-13 T 13-10-2018 Y11_29511 58d320a004c9dbbc1fddab66ea6861da 456 Pfam PF07690 Major Facilitator Superfamily 2 385 2.2E-40 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_29511 58d320a004c9dbbc1fddab66ea6861da 456 SUPERFAMILY SSF103473 2 432 1.83E-56 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_29511 58d320a004c9dbbc1fddab66ea6861da 456 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 1 411 5.0E-69 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 SUPERFAMILY SSF58104 234 515 8.11E-76 T 13-10-2018 Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 Pfam PF00672 HAMP domain 217 262 1.1E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 SMART SM00304 214 266 2.4E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 Pfam PF02203 Tar ligand binding domain homologue 1 170 5.2E-50 T 13-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 292 314 - T 13-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 SUPERFAMILY SSF47170 25 177 4.97E-41 T 13-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 SMART SM00319 44 180 9.9E-31 T 13-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 Gene3D G3DSA:1.20.120.30 22 191 5.0E-42 T 13-10-2018 Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 482 7.8E-56 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 SMART SM00283 267 514 2.6E-101 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 Gene3D G3DSA:1.10.287.950 214 516 1.4E-94 T 13-10-2018 Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 1.9E-80 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 1.9E-80 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.9E-80 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 1.9E-80 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 1.9E-80 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 1.9E-80 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_14591 e9914fcf60fb0cfe15b7bbd39212d667 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 1.9E-80 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_18611 d971557a29a23d2ab16d6a42e5781a9c 238 SUPERFAMILY SSF46548 107 236 8.02E-40 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Y11_18611 d971557a29a23d2ab16d6a42e5781a9c 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 9.4E-91 T 13-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_18611 d971557a29a23d2ab16d6a42e5781a9c 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_18611 d971557a29a23d2ab16d6a42e5781a9c 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 5.6E-10 T 13-10-2018 Y11_18611 d971557a29a23d2ab16d6a42e5781a9c 238 Gene3D G3DSA:1.10.1060.10 107 238 3.1E-59 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Y11_18611 d971557a29a23d2ab16d6a42e5781a9c 238 SUPERFAMILY SSF54292 1 106 3.68E-31 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Y11_18611 d971557a29a23d2ab16d6a42e5781a9c 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 5.1E-32 T 13-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_18611 d971557a29a23d2ab16d6a42e5781a9c 238 Gene3D G3DSA:3.10.20.30 1 106 1.4E-34 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Y11_41911 86193d04af947253ff1eb024543a2106 110 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 1 103 28.574 T 13-10-2018 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 Y11_41911 86193d04af947253ff1eb024543a2106 110 Gene3D G3DSA:1.10.890.10 30 104 4.0E-35 T 13-10-2018 IPR038303 HNS-dependent expression A/B superfamily Y11_41911 86193d04af947253ff1eb024543a2106 110 Pfam PF06411 HdeA/HdeB family 9 96 2.0E-24 T 13-10-2018 IPR010486 HNS-dependent expression A/B Y11_41911 86193d04af947253ff1eb024543a2106 110 SUPERFAMILY SSF47752 35 95 2.75E-5 T 13-10-2018 IPR036831 HNS-dependent expression A superfamily GO:0030288|GO:0071468 Y11_41911 86193d04af947253ff1eb024543a2106 110 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 36 104 2.0E-33 T 13-10-2018 Y11_36771 82fa4dd36425e80820b96650107c21e2 657 Gene3D G3DSA:3.40.50.300 216 431 8.7E-50 T 13-10-2018 Y11_36771 82fa4dd36425e80820b96650107c21e2 657 Pfam PF03880 DbpA RNA binding domain 496 565 1.8E-19 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Y11_36771 82fa4dd36425e80820b96650107c21e2 657 SMART SM00487 26 224 7.2E-65 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Y11_36771 82fa4dd36425e80820b96650107c21e2 657 Pfam PF00270 DEAD/DEAH box helicase 32 196 3.5E-50 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Y11_36771 82fa4dd36425e80820b96650107c21e2 657 SMART SM00490 260 341 6.3E-32 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_36771 82fa4dd36425e80820b96650107c21e2 657 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Y11_36771 82fa4dd36425e80820b96650107c21e2 657 Gene3D G3DSA:3.30.70.330 493 566 3.1E-9 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Y11_36771 82fa4dd36425e80820b96650107c21e2 657 Pfam PF12343 Cold shock protein DEAD box A 584 657 2.8E-17 T 13-10-2018 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 Y11_36771 82fa4dd36425e80820b96650107c21e2 657 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 567 46.927 T 13-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 Y11_36771 82fa4dd36425e80820b96650107c21e2 657 Gene3D G3DSA:3.40.50.300 2 213 5.1E-77 T 13-10-2018 Y11_36771 82fa4dd36425e80820b96650107c21e2 657 Pfam PF00271 Helicase conserved C-terminal domain 233 341 2.9E-29 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_36771 82fa4dd36425e80820b96650107c21e2 657 SUPERFAMILY SSF52540 75 362 4.9E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_26791 37c91c80b59e9b69bbbca4dce6dd90c6 121 TIGRFAM TIGR03577 EF_0830: conserved hypothetical protein EF_0830/AHA_3911 4 118 7.0E-68 T 13-10-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 Y11_26791 37c91c80b59e9b69bbbca4dce6dd90c6 121 Pfam PF14272 Glycine-rich SFCGS 4 117 5.3E-62 T 13-10-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 Y11_20711 36cf70cd8f59c414ed085041fcae4d93 84 Pfam PF02609 Exonuclease VII small subunit 15 65 1.1E-19 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Y11_20711 36cf70cd8f59c414ed085041fcae4d93 84 SUPERFAMILY SSF116842 9 74 8.24E-21 T 13-10-2018 Y11_20711 36cf70cd8f59c414ed085041fcae4d93 84 PIRSF PIRSF006488 2 84 7.1E-24 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Y11_20711 36cf70cd8f59c414ed085041fcae4d93 84 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 16.188 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Y11_20711 36cf70cd8f59c414ed085041fcae4d93 84 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 14 69 1.7E-22 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Y11_20711 36cf70cd8f59c414ed085041fcae4d93 84 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 54 1.0E-15 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Y11_20711 36cf70cd8f59c414ed085041fcae4d93 84 Gene3D G3DSA:1.10.287.1040 9 84 9.6E-25 T 13-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 Y11_35351 a69053b06a558190b2d311c3c0af8cc8 243 Pfam PF01514 Secretory protein of YscJ/FliF family 8 191 2.6E-25 T 13-10-2018 IPR006182 Secretory protein YscJ/FliF Y11_35351 a69053b06a558190b2d311c3c0af8cc8 243 Gene3D G3DSA:3.30.300.30 98 193 9.5E-33 T 13-10-2018 Y11_35351 a69053b06a558190b2d311c3c0af8cc8 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 97 112 8.7E-20 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Y11_35351 a69053b06a558190b2d311c3c0af8cc8 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 117 130 8.7E-20 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Y11_35351 a69053b06a558190b2d311c3c0af8cc8 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 77 90 8.7E-20 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Y11_35351 a69053b06a558190b2d311c3c0af8cc8 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 164 176 8.7E-20 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Y11_35351 a69053b06a558190b2d311c3c0af8cc8 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 25 35 8.7E-20 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Y11_35351 a69053b06a558190b2d311c3c0af8cc8 243 Gene3D G3DSA:3.30.70.1530 21 91 3.1E-28 T 13-10-2018 Y11_35351 a69053b06a558190b2d311c3c0af8cc8 243 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 5 192 1.3E-71 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Y11_06031 bc52ac9b7b75ac1af358423b3b2977bf 572 SMART SM00382 358 544 6.2E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_06031 bc52ac9b7b75ac1af358423b3b2977bf 572 Gene3D G3DSA:1.20.1560.10 1 315 4.4E-73 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_06031 bc52ac9b7b75ac1af358423b3b2977bf 572 Gene3D G3DSA:3.40.50.300 329 572 2.1E-91 T 13-10-2018 Y11_06031 bc52ac9b7b75ac1af358423b3b2977bf 572 SUPERFAMILY SSF52540 322 569 2.77E-91 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_06031 bc52ac9b7b75ac1af358423b3b2977bf 572 Pfam PF00664 ABC transporter transmembrane region 20 287 1.8E-49 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Y11_06031 bc52ac9b7b75ac1af358423b3b2977bf 572 Pfam PF00005 ABC transporter 351 498 1.1E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_06031 bc52ac9b7b75ac1af358423b3b2977bf 572 SUPERFAMILY SSF90123 3 321 5.23E-73 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_06031 bc52ac9b7b75ac1af358423b3b2977bf 572 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_24871 727b679565b236140e1130caab70de61 275 SUPERFAMILY SSF56300 16 273 6.38E-61 T 13-10-2018 Y11_24871 727b679565b236140e1130caab70de61 275 Gene3D G3DSA:3.60.21.10 3 272 3.2E-70 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Y11_24871 727b679565b236140e1130caab70de61 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 40.004 T 13-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 Y11_24871 727b679565b236140e1130caab70de61 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 2.0E-24 T 13-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 Y11_24871 727b679565b236140e1130caab70de61 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 207 4.3E-20 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Y11_41121 5270ab6ac9669a225167c2eaa55b7b69 340 Gene3D G3DSA:2.160.10.10 100 309 8.6E-67 T 13-10-2018 Y11_41121 5270ab6ac9669a225167c2eaa55b7b69 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 1.2E-23 T 13-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 Y11_41121 5270ab6ac9669a225167c2eaa55b7b69 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.357 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Y11_41121 5270ab6ac9669a225167c2eaa55b7b69 340 Gene3D G3DSA:3.40.1390.10 1 99 2.4E-37 T 13-10-2018 Y11_41121 5270ab6ac9669a225167c2eaa55b7b69 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 1.0E-9 T 13-10-2018 IPR001451 Hexapeptide repeat Y11_41121 5270ab6ac9669a225167c2eaa55b7b69 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 5.9E-8 T 13-10-2018 IPR001451 Hexapeptide repeat Y11_41121 5270ab6ac9669a225167c2eaa55b7b69 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 6.8E-7 T 13-10-2018 IPR001451 Hexapeptide repeat Y11_41121 5270ab6ac9669a225167c2eaa55b7b69 340 SUPERFAMILY SSF51161 33 316 3.2E-87 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Y11_41121 5270ab6ac9669a225167c2eaa55b7b69 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 2.6E-124 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Y11_41121 5270ab6ac9669a225167c2eaa55b7b69 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Y11_41121 5270ab6ac9669a225167c2eaa55b7b69 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Y11_16591 cc0a55ab838e4c93070d50877c171665 204 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 1.7E-30 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Y11_16591 cc0a55ab838e4c93070d50877c171665 204 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 201 2.2E-16 T 13-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 Y11_16591 cc0a55ab838e4c93070d50877c171665 204 SUPERFAMILY SSF101386 114 203 1.81E-23 T 13-10-2018 Y11_16591 cc0a55ab838e4c93070d50877c171665 204 Gene3D G3DSA:3.10.20.400 3 97 5.0E-34 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Y11_16591 cc0a55ab838e4c93070d50877c171665 204 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 18.54 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Y11_16591 cc0a55ab838e4c93070d50877c171665 204 Gene3D G3DSA:1.10.287.1080 112 204 4.8E-28 T 13-10-2018 Y11_16591 cc0a55ab838e4c93070d50877c171665 204 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 2.0E-24 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Y11_16591 cc0a55ab838e4c93070d50877c171665 204 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 197 4.7E-30 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Y11_16591 cc0a55ab838e4c93070d50877c171665 204 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 37.642 T 13-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 Y11_16591 cc0a55ab838e4c93070d50877c171665 204 SUPERFAMILY SSF141734 5 122 3.53E-46 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Y11_15951 697406f76b75a2c1d074482c0abc603f 271 SMART SM00382 26 212 4.8E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_15951 697406f76b75a2c1d074482c0abc603f 271 Pfam PF00005 ABC transporter 17 165 1.0E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_15951 697406f76b75a2c1d074482c0abc603f 271 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_15951 697406f76b75a2c1d074482c0abc603f 271 Gene3D G3DSA:3.40.50.300 2 270 6.4E-66 T 13-10-2018 Y11_15951 697406f76b75a2c1d074482c0abc603f 271 SUPERFAMILY SSF52540 2 231 4.13E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_15951 697406f76b75a2c1d074482c0abc603f 271 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 11 199 7.3E-81 T 13-10-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 Y11_07131 a83151ff6e8e53f1211c9555fa3a3600 99 Pfam PF02371 Transposase IS116/IS110/IS902 family 8 85 4.4E-23 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_04021 993d1afbd2e47a4108ce8ecd01507168 444 Gene3D G3DSA:1.10.3710.10 343 444 1.1E-37 T 13-10-2018 Y11_04021 993d1afbd2e47a4108ce8ecd01507168 444 Pfam PF12002 MgsA AAA+ ATPase C terminal 265 431 3.4E-64 T 13-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal Y11_04021 993d1afbd2e47a4108ce8ecd01507168 444 Pfam PF16193 AAA C-terminal domain 185 264 8.9E-22 T 13-10-2018 IPR032423 AAA C-terminal domain Y11_04021 993d1afbd2e47a4108ce8ecd01507168 444 SMART SM00382 46 162 4.6E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_04021 993d1afbd2e47a4108ce8ecd01507168 444 SUPERFAMILY SSF48019 249 431 5.67E-71 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Y11_04021 993d1afbd2e47a4108ce8ecd01507168 444 Gene3D G3DSA:1.20.272.10 238 342 9.9E-44 T 13-10-2018 Y11_04021 993d1afbd2e47a4108ce8ecd01507168 444 Gene3D G3DSA:3.40.50.300 1 161 4.9E-47 T 13-10-2018 Y11_04021 993d1afbd2e47a4108ce8ecd01507168 444 Gene3D G3DSA:1.10.8.60 162 237 1.0E-28 T 13-10-2018 Y11_04021 993d1afbd2e47a4108ce8ecd01507168 444 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 50 156 3.7E-15 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Y11_04021 993d1afbd2e47a4108ce8ecd01507168 444 SUPERFAMILY SSF52540 3 231 2.85E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_40361 92e00fccbdd79cdc52485a3563c9ab3a 191 Pfam PF00482 Type II secretion system (T2SS), protein F 61 180 1.0E-24 T 13-10-2018 IPR018076 Type II secretion system F domain Y11_40361 92e00fccbdd79cdc52485a3563c9ab3a 191 Gene3D G3DSA:1.20.81.30 43 153 1.5E-24 T 13-10-2018 Y11_22171 9592b5ccbd35b5c05de5438a8f9ba78b 167 Gene3D G3DSA:1.10.10.10 1 70 2.4E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_22171 9592b5ccbd35b5c05de5438a8f9ba78b 167 Hamap MF_01114 Regulatory protein RecX [recX]. 2 167 15.088 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Y11_22171 9592b5ccbd35b5c05de5438a8f9ba78b 167 Pfam PF02631 RecX family 51 163 9.7E-32 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Y11_22171 9592b5ccbd35b5c05de5438a8f9ba78b 167 Gene3D G3DSA:1.10.10.10 71 116 2.9E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_22171 9592b5ccbd35b5c05de5438a8f9ba78b 167 Gene3D G3DSA:1.10.10.10 117 167 5.3E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_31671 1db297e505b1477bddb565bbd5c2890e 274 SUPERFAMILY SSF51182 16 253 2.45E-67 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_31671 1db297e505b1477bddb565bbd5c2890e 274 Gene3D G3DSA:2.60.120.10 15 122 6.2E-38 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_31671 1db297e505b1477bddb565bbd5c2890e 274 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 19 264 4.2E-99 T 13-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 Y11_31671 1db297e505b1477bddb565bbd5c2890e 274 Pfam PF04962 KduI/IolB family 9 264 2.5E-109 T 13-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Y11_31671 1db297e505b1477bddb565bbd5c2890e 274 PIRSF PIRSF036628 1 270 4.8E-111 T 13-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 Y11_31671 1db297e505b1477bddb565bbd5c2890e 274 Gene3D G3DSA:2.60.120.10 123 271 1.2E-61 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_13951 989165c26ede928e8f620fa522de0740 220 SUPERFAMILY SSF161098 13 206 4.45E-49 T 13-10-2018 IPR035906 MetI-like superfamily Y11_13951 989165c26ede928e8f620fa522de0740 220 Gene3D G3DSA:1.10.3720.10 4 219 4.0E-61 T 13-10-2018 IPR035906 MetI-like superfamily Y11_13951 989165c26ede928e8f620fa522de0740 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 5.8E-24 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_13951 989165c26ede928e8f620fa522de0740 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 1.7E-32 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Y11_03501 b973ad86f163385d4e268e5bb0b6b28f 381 SUPERFAMILY SSF53383 15 380 3.94E-114 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_03501 b973ad86f163385d4e268e5bb0b6b28f 381 PIRSF PIRSF001434 1 381 4.7E-145 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Y11_03501 b973ad86f163385d4e268e5bb0b6b28f 381 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 379 4.7E-151 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Y11_03501 b973ad86f163385d4e268e5bb0b6b28f 381 Gene3D G3DSA:3.90.1150.10 248 381 4.1E-56 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_03501 b973ad86f163385d4e268e5bb0b6b28f 381 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Y11_03501 b973ad86f163385d4e268e5bb0b6b28f 381 Gene3D G3DSA:3.40.640.10 2 247 4.7E-92 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_00341 595d01aa5fc1c4aa5e8cb3a8e177e0dd 236 SMART SM00421 173 230 1.3E-24 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_00341 595d01aa5fc1c4aa5e8cb3a8e177e0dd 236 ProSitePatterns PS00622 LuxR-type HTH domain signature. 190 217 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_00341 595d01aa5fc1c4aa5e8cb3a8e177e0dd 236 Gene3D G3DSA:3.40.50.12740 33 235 9.0E-65 T 13-10-2018 Y11_00341 595d01aa5fc1c4aa5e8cb3a8e177e0dd 236 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 218 6.9E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_00341 595d01aa5fc1c4aa5e8cb3a8e177e0dd 236 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 206 6.9E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_00341 595d01aa5fc1c4aa5e8cb3a8e177e0dd 236 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 190 6.9E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_00341 595d01aa5fc1c4aa5e8cb3a8e177e0dd 236 Pfam PF00072 Response regulator receiver domain 34 145 3.1E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_00341 595d01aa5fc1c4aa5e8cb3a8e177e0dd 236 SMART SM00448 32 145 2.4E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_00341 595d01aa5fc1c4aa5e8cb3a8e177e0dd 236 SUPERFAMILY SSF52172 31 162 8.97E-33 T 13-10-2018 IPR011006 CheY-like superfamily Y11_00341 595d01aa5fc1c4aa5e8cb3a8e177e0dd 236 Pfam PF00196 Bacterial regulatory proteins, luxR family 175 229 2.4E-22 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_00341 595d01aa5fc1c4aa5e8cb3a8e177e0dd 236 SUPERFAMILY SSF46894 157 234 7.82E-22 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_17921 61506d4f6384c6555b61d445d0f3bd76 179 SUPERFAMILY SSF55154 8 177 1.14E-36 T 13-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 Y11_17921 61506d4f6384c6555b61d445d0f3bd76 179 Pfam PF01928 CYTH domain 9 173 3.4E-22 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Y11_17921 61506d4f6384c6555b61d445d0f3bd76 179 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 9 148 1.0E-7 T 13-10-2018 Y11_17921 61506d4f6384c6555b61d445d0f3bd76 179 Gene3D G3DSA:2.40.320.10 1 179 4.9E-46 T 13-10-2018 Y11_17921 61506d4f6384c6555b61d445d0f3bd76 179 SMART SM01118 8 179 8.8E-13 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Y11_03361 4b9a64fbb341ea3578fa28d3a742e8f9 421 Pfam PF12912 NLPC_P60 stabilising domain, N term 2 87 1.1E-4 T 13-10-2018 IPR025606 NLPC/P60, N-terminal domain Y11_03361 4b9a64fbb341ea3578fa28d3a742e8f9 421 Pfam PF12913 SH3 domain (SH3b1 type) 116 168 8.2E-21 T 13-10-2018 IPR039439 SH3b1 domain Y11_03361 4b9a64fbb341ea3578fa28d3a742e8f9 421 SUPERFAMILY SSF54001 266 376 4.02E-11 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Y11_03361 4b9a64fbb341ea3578fa28d3a742e8f9 421 PIRSF PIRSF019015 1 421 4.0E-121 T 13-10-2018 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type Y11_03361 4b9a64fbb341ea3578fa28d3a742e8f9 421 Pfam PF12914 SH3 domain of SH3b2 type 176 221 4.8E-7 T 13-10-2018 IPR026864 SH3b2-type SH3 domain Y11_03361 4b9a64fbb341ea3578fa28d3a742e8f9 421 Gene3D G3DSA:3.90.1720.10 251 408 3.6E-31 T 13-10-2018 Y11_03361 4b9a64fbb341ea3578fa28d3a742e8f9 421 Pfam PF00877 NlpC/P60 family 279 359 4.0E-6 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Y11_38971 ced6fddc6eb89a6273482513f46e52aa 303 Pfam PF01795 MraW methylase family 1 300 5.7E-110 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Y11_38971 ced6fddc6eb89a6273482513f46e52aa 303 SUPERFAMILY SSF81799 104 203 3.92E-34 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Y11_38971 ced6fddc6eb89a6273482513f46e52aa 303 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 1 300 1.6E-119 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Y11_38971 ced6fddc6eb89a6273482513f46e52aa 303 Gene3D G3DSA:3.40.50.150 1 300 3.1E-104 T 13-10-2018 Y11_38971 ced6fddc6eb89a6273482513f46e52aa 303 PIRSF PIRSF004486 1 302 1.9E-95 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Y11_38971 ced6fddc6eb89a6273482513f46e52aa 303 SUPERFAMILY SSF53335 1 301 3.38E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_38971 ced6fddc6eb89a6273482513f46e52aa 303 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 1 301 35.433 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Y11_38971 ced6fddc6eb89a6273482513f46e52aa 303 Gene3D G3DSA:1.10.150.170 102 204 3.1E-104 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 SUPERFAMILY SSF54211 228 483 3.72E-101 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 Gene3D G3DSA:3.30.230.80 227 399 1.0E-70 T 13-10-2018 Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 Pfam PF00183 Hsp90 protein 212 621 1.1E-126 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 SUPERFAMILY SSF110942 508 621 5.62E-36 T 13-10-2018 IPR037196 HSP90, C-terminal domain Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 Gene3D G3DSA:1.20.120.790 491 622 8.4E-47 T 13-10-2018 IPR037196 HSP90, C-terminal domain Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 182 1.9E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 13-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 PRINTS PR00775 90kDa heat shock protein signature 172 189 2.0E-64 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 PRINTS PR00775 90kDa heat shock protein signature 75 92 2.0E-64 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 PRINTS PR00775 90kDa heat shock protein signature 120 142 2.0E-64 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 PRINTS PR00775 90kDa heat shock protein signature 26 48 2.0E-64 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 PRINTS PR00775 90kDa heat shock protein signature 93 110 2.0E-64 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 PRINTS PR00775 90kDa heat shock protein signature 190 208 2.0E-64 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 PRINTS PR00775 90kDa heat shock protein signature 5 25 2.0E-64 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 SMART SM00387 27 184 1.1E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 PIRSF PIRSF002583 1 622 1.3E-218 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 SUPERFAMILY SSF55874 4 212 4.45E-66 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 Gene3D G3DSA:3.30.565.10 1 215 4.8E-79 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 621 32.95 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Y11_20031 5c1eb94e5d686795e8b18d5f6f194229 622 Gene3D G3DSA:3.40.50.11260 400 490 6.7E-37 T 13-10-2018 Y11_18571 44df0319653f350e29eeb33a2a6d135f 292 Pfam PF00549 CoA-ligase 151 271 4.0E-21 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Y11_18571 44df0319653f350e29eeb33a2a6d135f 292 SUPERFAMILY SSF52210 123 288 1.11E-56 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Y11_18571 44df0319653f350e29eeb33a2a6d135f 292 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.093 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Y11_18571 44df0319653f350e29eeb33a2a6d135f 292 Pfam PF02629 CoA binding domain 6 99 1.0E-32 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Y11_18571 44df0319653f350e29eeb33a2a6d135f 292 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 13-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Y11_18571 44df0319653f350e29eeb33a2a6d135f 292 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 287 4.3E-146 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Y11_18571 44df0319653f350e29eeb33a2a6d135f 292 Gene3D G3DSA:3.40.50.720 2 123 8.0E-52 T 13-10-2018 Y11_18571 44df0319653f350e29eeb33a2a6d135f 292 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 13-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Y11_18571 44df0319653f350e29eeb33a2a6d135f 292 PIRSF PIRSF001553 1 291 1.4E-135 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Y11_18571 44df0319653f350e29eeb33a2a6d135f 292 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.1E-40 T 13-10-2018 Y11_18571 44df0319653f350e29eeb33a2a6d135f 292 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.1E-40 T 13-10-2018 Y11_18571 44df0319653f350e29eeb33a2a6d135f 292 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.1E-40 T 13-10-2018 Y11_18571 44df0319653f350e29eeb33a2a6d135f 292 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.1E-40 T 13-10-2018 Y11_18571 44df0319653f350e29eeb33a2a6d135f 292 SMART SM00881 4 100 6.1E-39 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Y11_18571 44df0319653f350e29eeb33a2a6d135f 292 SUPERFAMILY SSF51735 1 122 4.22E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_18571 44df0319653f350e29eeb33a2a6d135f 292 Gene3D G3DSA:3.40.50.261 124 289 4.9E-76 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Y11_00651 f227fe0bd1829f0c0155b3ec8621fa03 293 Gene3D G3DSA:3.40.50.1100 35 140 1.4E-111 T 13-10-2018 Y11_00651 f227fe0bd1829f0c0155b3ec8621fa03 293 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 281 3.8E-66 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Y11_00651 f227fe0bd1829f0c0155b3ec8621fa03 293 SUPERFAMILY SSF53686 4 289 1.96E-90 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y11_00651 f227fe0bd1829f0c0155b3ec8621fa03 293 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 4.6E-122 T 13-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Y11_00651 f227fe0bd1829f0c0155b3ec8621fa03 293 Gene3D G3DSA:3.40.50.1100 8 288 1.4E-111 T 13-10-2018 Y11_00651 f227fe0bd1829f0c0155b3ec8621fa03 293 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 1.9E-149 T 13-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Y11_00651 f227fe0bd1829f0c0155b3ec8621fa03 293 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Y11_37161 b43816a8680fc67b727f11048cd566d5 154 Gene3D G3DSA:3.20.20.70 2 154 1.2E-20 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_37161 b43816a8680fc67b727f11048cd566d5 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Y11_37161 b43816a8680fc67b727f11048cd566d5 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 3.0E-51 T 13-10-2018 Y11_37161 b43816a8680fc67b727f11048cd566d5 154 PIRSF PIRSF000368 1 154 1.0E-59 T 13-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 Y11_37161 b43816a8680fc67b727f11048cd566d5 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 2.2E-63 T 13-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 Y11_37161 b43816a8680fc67b727f11048cd566d5 154 SUPERFAMILY SSF102114 16 114 6.28E-7 T 13-10-2018 Y11_29701 fb7786ab362cf67342a12597eb194d21 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 2.1E-8 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29701 fb7786ab362cf67342a12597eb194d21 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 2.1E-8 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29701 fb7786ab362cf67342a12597eb194d21 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 2.1E-8 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29701 fb7786ab362cf67342a12597eb194d21 79 Pfam PF00137 ATP synthase subunit C 11 69 9.9E-10 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Y11_29701 fb7786ab362cf67342a12597eb194d21 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 13-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29701 fb7786ab362cf67342a12597eb194d21 79 SUPERFAMILY SSF81333 3 77 2.75E-18 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Y11_29701 fb7786ab362cf67342a12597eb194d21 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 13-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Y11_29701 fb7786ab362cf67342a12597eb194d21 79 Gene3D G3DSA:1.20.20.10 1 79 2.4E-34 T 13-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29701 fb7786ab362cf67342a12597eb194d21 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 14.452 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_02221 31bbe2dde16079458978d18ced7114b9 180 SUPERFAMILY SSF54862 33 155 4.6E-29 T 13-10-2018 Y11_02221 31bbe2dde16079458978d18ced7114b9 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_02221 31bbe2dde16079458978d18ced7114b9 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 7 147 26.945 T 13-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02221 31bbe2dde16079458978d18ced7114b9 180 Gene3D G3DSA:3.30.70.3270 33 173 7.0E-43 T 13-10-2018 Y11_02221 31bbe2dde16079458978d18ced7114b9 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 2.0E-51 T 13-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02221 31bbe2dde16079458978d18ced7114b9 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 6.7E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_02401 46330e85c0ccfbadca92a9fd3b11d892 603 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 601 0.0 T 13-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 Y11_02401 46330e85c0ccfbadca92a9fd3b11d892 603 Gene3D G3DSA:3.50.30.80 419 568 1.1E-50 T 13-10-2018 Y11_02401 46330e85c0ccfbadca92a9fd3b11d892 603 Pfam PF00920 Dehydratase family 67 598 4.0E-160 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Y11_02401 46330e85c0ccfbadca92a9fd3b11d892 603 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Y11_02401 46330e85c0ccfbadca92a9fd3b11d892 603 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 1 602 57.781 T 13-10-2018 Y11_02401 46330e85c0ccfbadca92a9fd3b11d892 603 SUPERFAMILY SSF52016 419 600 1.41E-58 T 13-10-2018 Y11_02401 46330e85c0ccfbadca92a9fd3b11d892 603 SUPERFAMILY SSF143975 1 418 4.18E-148 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Y11_02401 46330e85c0ccfbadca92a9fd3b11d892 603 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 SUPERFAMILY SSF48452 313 398 1.3E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 SUPERFAMILY SSF48452 90 286 4.17E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 Gene3D G3DSA:1.25.40.10 86 187 1.4E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 Pfam PF13432 Tetratricopeptide repeat 94 155 0.011 T 13-10-2018 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 Pfam PF13432 Tetratricopeptide repeat 204 253 5.6E-4 T 13-10-2018 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 Pfam PF14559 Tetratricopeptide repeat 18 72 1.2E-7 T 13-10-2018 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 Pfam PF14559 Tetratricopeptide repeat 350 401 1.4E-9 T 13-10-2018 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 Gene3D G3DSA:1.25.40.10 196 294 1.6E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 SMART SM00028 198 231 0.74 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 SMART SM00028 40 73 1.6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 SMART SM00028 122 155 0.047 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 SMART SM00028 88 121 65.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 SMART SM00028 340 373 170.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 SUPERFAMILY SSF48452 14 82 7.78E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 Gene3D G3DSA:1.25.40.10 3 85 1.1E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 540 880 3.8E-118 T 13-10-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 Y11_31241 c6f22cd9fc9c5c5051d6f85ceb73fc21 901 Gene3D G3DSA:1.25.40.10 309 519 2.1E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_20011 884671ad17e1675da037e4533bc9cf49 214 SUPERFAMILY SSF52540 1 210 1.43E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_20011 884671ad17e1675da037e4533bc9cf49 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 13-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Y11_20011 884671ad17e1675da037e4533bc9cf49 214 Pfam PF00406 Adenylate kinase 5 185 5.0E-60 T 13-10-2018 Y11_20011 884671ad17e1675da037e4533bc9cf49 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 51.822 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Y11_20011 884671ad17e1675da037e4533bc9cf49 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 2.2E-75 T 13-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Y11_20011 884671ad17e1675da037e4533bc9cf49 214 PRINTS PR00094 Adenylate kinase signature 81 97 3.1E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Y11_20011 884671ad17e1675da037e4533bc9cf49 214 PRINTS PR00094 Adenylate kinase signature 4 17 3.1E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Y11_20011 884671ad17e1675da037e4533bc9cf49 214 PRINTS PR00094 Adenylate kinase signature 173 187 3.1E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Y11_20011 884671ad17e1675da037e4533bc9cf49 214 PRINTS PR00094 Adenylate kinase signature 32 46 3.1E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Y11_20011 884671ad17e1675da037e4533bc9cf49 214 PRINTS PR00094 Adenylate kinase signature 156 171 3.1E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Y11_20011 884671ad17e1675da037e4533bc9cf49 214 Gene3D G3DSA:3.40.50.300 1 214 4.6E-79 T 13-10-2018 Y11_20011 884671ad17e1675da037e4533bc9cf49 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 4.1E-14 T 13-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 SUPERFAMILY SSF81767 227 368 3.79E-45 T 13-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 SMART SM00957 6 402 0.0 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 PRINTS PR00906 SecA protein signature 101 115 1.4E-73 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 PRINTS PR00906 SecA protein signature 63 87 1.4E-73 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 PRINTS PR00906 SecA protein signature 170 190 1.4E-73 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 PRINTS PR00906 SecA protein signature 339 361 1.4E-73 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 PRINTS PR00906 SecA protein signature 376 393 1.4E-73 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 PRINTS PR00906 SecA protein signature 117 127 1.4E-73 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 PRINTS PR00906 SecA protein signature 413 426 1.4E-73 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 Gene3D G3DSA:3.90.1440.10 229 368 2.4E-176 T 13-10-2018 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 Pfam PF07516 SecA Wing and Scaffold domain 617 830 6.4E-68 T 13-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 Pfam PF02810 SEC-C motif 884 902 1.1E-10 T 13-10-2018 IPR004027 SEC-C motif Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.909 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 ProSitePatterns PS01312 SecA family signature. 500 515 - T 13-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 SUPERFAMILY SSF52540 416 618 4.68E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 Gene3D G3DSA:3.40.50.300 22 415 2.4E-176 T 13-10-2018 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 Gene3D G3DSA:1.10.3060.10 621 833 8.2E-80 T 13-10-2018 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 SUPERFAMILY SSF81886 620 892 4.05E-83 T 13-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 SMART SM00958 228 358 7.8E-86 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 Pfam PF01043 SecA preprotein cross-linking domain 232 358 8.6E-40 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 Gene3D G3DSA:3.40.50.300 417 620 1.5E-86 T 13-10-2018 Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 SUPERFAMILY SSF52540 5 415 1.19E-82 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_39141 821805401f1fa5a305aac1e39fb89f30 904 Pfam PF07517 SecA DEAD-like domain 7 402 1.9E-131 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Y11_28321 cd5d85657304a0d5caab764c425b0d58 1645 Pfam PF05593 RHS Repeat 768 804 1.8E-5 T 13-10-2018 IPR031325 RHS repeat Y11_28321 cd5d85657304a0d5caab764c425b0d58 1645 Pfam PF05593 RHS Repeat 565 598 9.7E-6 T 13-10-2018 IPR031325 RHS repeat Y11_28321 cd5d85657304a0d5caab764c425b0d58 1645 Gene3D G3DSA:2.180.10.10 875 1351 7.0E-16 T 13-10-2018 Y11_28321 cd5d85657304a0d5caab764c425b0d58 1645 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 768 806 1.3E-6 T 13-10-2018 IPR006530 YD repeat Y11_28321 cd5d85657304a0d5caab764c425b0d58 1645 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1287 1352 3.4E-16 T 13-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 Y11_28321 cd5d85657304a0d5caab764c425b0d58 1645 SUPERFAMILY SSF56399 1488 1572 3.88E-6 T 13-10-2018 Y11_28321 cd5d85657304a0d5caab764c425b0d58 1645 Gene3D G3DSA:3.90.210.10 1489 1572 3.2E-6 T 13-10-2018 Y11_43461 a1e163c8dbd6bcf0dec3333ed854c190 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 164 2.6E-16 T 13-10-2018 IPR016188 PurM-like, N-terminal domain Y11_43461 a1e163c8dbd6bcf0dec3333ed854c190 347 SUPERFAMILY SSF55326 7 170 5.23E-53 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Y11_43461 a1e163c8dbd6bcf0dec3333ed854c190 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 341 6.1E-38 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Y11_43461 a1e163c8dbd6bcf0dec3333ed854c190 347 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 334 3.1E-152 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Y11_43461 a1e163c8dbd6bcf0dec3333ed854c190 347 SUPERFAMILY SSF56042 171 342 1.41E-62 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Y11_43461 a1e163c8dbd6bcf0dec3333ed854c190 347 Gene3D G3DSA:3.90.650.10 171 346 3.4E-70 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Y11_43461 a1e163c8dbd6bcf0dec3333ed854c190 347 Gene3D G3DSA:3.30.1330.10 6 170 6.2E-69 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Y11_43461 a1e163c8dbd6bcf0dec3333ed854c190 347 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 345 47.19 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Y11_37411 c36d9d540dcc7df111ac15d4bd3114fc 262 SUPERFAMILY SSF47413 2 68 5.07E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_37411 c36d9d540dcc7df111ac15d4bd3114fc 262 Gene3D G3DSA:1.10.260.40 1 62 2.2E-15 T 13-10-2018 Y11_37411 c36d9d540dcc7df111ac15d4bd3114fc 262 SMART SM00530 4 59 6.9E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_37411 c36d9d540dcc7df111ac15d4bd3114fc 262 Pfam PF01381 Helix-turn-helix 5 56 1.3E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_15001 edfdc66ab1b62808835f067ccbf75f8e 267 Gene3D G3DSA:3.40.390.10 140 263 2.5E-41 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Y11_15001 edfdc66ab1b62808835f067ccbf75f8e 267 SUPERFAMILY SSF55486 33 245 1.25E-41 T 13-10-2018 Y11_15001 edfdc66ab1b62808835f067ccbf75f8e 267 Pfam PF06167 Glucose-regulated metallo-peptidase M90 11 243 3.3E-63 T 13-10-2018 IPR010384 MtfA family Y11_15001 edfdc66ab1b62808835f067ccbf75f8e 267 Hamap MF_01593 Protein MtfA [mtfA]. 1 265 65.582 T 13-10-2018 IPR010384 MtfA family Y11_15001 edfdc66ab1b62808835f067ccbf75f8e 267 Gene3D G3DSA:1.10.472.150 16 139 7.5E-41 T 13-10-2018 Y11_16081 b864cee2efa8fdf724bb776fd64f7281 388 Gene3D G3DSA:3.30.2110.10 29 198 1.7E-47 T 13-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Y11_16081 b864cee2efa8fdf724bb776fd64f7281 388 PIRSF PIRSF026782 23 384 5.0E-131 T 13-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Y11_16081 b864cee2efa8fdf724bb776fd64f7281 388 Pfam PF01888 CbiD 28 283 7.0E-94 T 13-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Y11_16081 b864cee2efa8fdf724bb776fd64f7281 388 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 27 377 30.906 T 13-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Y11_16081 b864cee2efa8fdf724bb776fd64f7281 388 SUPERFAMILY SSF111342 15 301 2.09E-88 T 13-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Y11_16081 b864cee2efa8fdf724bb776fd64f7281 388 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 34 377 1.0E-86 T 13-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Y11_04481 c58ea5c1b1e77b765ce0f0edb876dbe1 336 PIRSF PIRSF000164 13 336 7.3E-97 T 13-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Y11_04481 c58ea5c1b1e77b765ce0f0edb876dbe1 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Y11_04481 c58ea5c1b1e77b765ce0f0edb876dbe1 336 Gene3D G3DSA:3.20.20.70 1 336 7.5E-146 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_04481 c58ea5c1b1e77b765ce0f0edb876dbe1 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Y11_04481 c58ea5c1b1e77b765ce0f0edb876dbe1 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 2.4E-92 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Y11_04481 c58ea5c1b1e77b765ce0f0edb876dbe1 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 2.7E-159 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Y11_04481 c58ea5c1b1e77b765ce0f0edb876dbe1 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.416 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Y11_04481 c58ea5c1b1e77b765ce0f0edb876dbe1 336 SUPERFAMILY SSF51395 1 334 9.53E-106 T 13-10-2018 Y11_20241 6cdd023512a1046956394b3d52431fc2 427 Pfam PF10797 Protein of unknown function 8 423 7.0E-143 T 13-10-2018 IPR019733 Uncharacterised protein family YhfT Y11_38141 1d8eeed41c483cc3341f3dbbaf110100 333 Pfam PF13602 Zinc-binding dehydrogenase 192 331 8.6E-20 T 13-10-2018 Y11_38141 1d8eeed41c483cc3341f3dbbaf110100 333 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 12 331 7.8E-117 T 13-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 Y11_38141 1d8eeed41c483cc3341f3dbbaf110100 333 Gene3D G3DSA:3.90.180.10 26 330 1.3E-94 T 13-10-2018 Y11_38141 1d8eeed41c483cc3341f3dbbaf110100 333 SUPERFAMILY SSF50129 4 143 1.02E-29 T 13-10-2018 IPR011032 GroES-like superfamily Y11_38141 1d8eeed41c483cc3341f3dbbaf110100 333 SMART SM00829 14 331 3.0E-10 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Y11_38141 1d8eeed41c483cc3341f3dbbaf110100 333 Gene3D G3DSA:3.40.50.720 127 272 1.3E-94 T 13-10-2018 Y11_38141 1d8eeed41c483cc3341f3dbbaf110100 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 89 5.5E-8 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Y11_38141 1d8eeed41c483cc3341f3dbbaf110100 333 SUPERFAMILY SSF51735 117 281 3.94E-32 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_43291 d220bfa6bf305d6be04d4d4a595318c1 469 Gene3D G3DSA:1.20.1720.10 8 241 1.0E-45 T 13-10-2018 Y11_43291 d220bfa6bf305d6be04d4d4a595318c1 469 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 461 41.794 T 13-10-2018 IPR023721 Multidrug resistance protein MdtD, putative Y11_43291 d220bfa6bf305d6be04d4d4a595318c1 469 Gene3D G3DSA:1.20.1250.20 260 456 2.3E-12 T 13-10-2018 Y11_43291 d220bfa6bf305d6be04d4d4a595318c1 469 SUPERFAMILY SSF103473 6 448 2.35E-59 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_43291 d220bfa6bf305d6be04d4d4a595318c1 469 Pfam PF07690 Major Facilitator Superfamily 11 401 8.7E-46 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_43291 d220bfa6bf305d6be04d4d4a595318c1 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 10 34 6.5E-9 T 13-10-2018 Y11_43291 d220bfa6bf305d6be04d4d4a595318c1 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 392 411 6.5E-9 T 13-10-2018 Y11_43291 d220bfa6bf305d6be04d4d4a595318c1 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 195 213 6.5E-9 T 13-10-2018 Y11_43291 d220bfa6bf305d6be04d4d4a595318c1 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 101 121 6.5E-9 T 13-10-2018 Y11_43291 d220bfa6bf305d6be04d4d4a595318c1 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 131 155 6.5E-9 T 13-10-2018 Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 SMART SM00382 159 361 6.3E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 460 4.4E-186 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 SMART SM00760 370 439 6.1E-45 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 Pfam PF11638 DnaA N-terminal domain 4 64 2.7E-20 T 13-10-2018 IPR024633 DnaA N-terminal domain Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 SUPERFAMILY SSF52540 127 338 7.92E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 Gene3D G3DSA:3.40.50.300 113 291 1.8E-51 T 13-10-2018 Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 Gene3D G3DSA:1.10.8.60 293 363 1.1E-23 T 13-10-2018 Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 SUPERFAMILY SSF48295 358 461 3.4E-38 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 461 34.443 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 Pfam PF00308 Bacterial dnaA protein 128 344 5.7E-99 T 13-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 ProSitePatterns PS01008 DnaA protein signature. 420 439 - T 13-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 Gene3D G3DSA:1.10.1750.10 369 462 7.2E-40 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 Gene3D G3DSA:3.30.300.180 2 108 1.1E-40 T 13-10-2018 IPR038454 DnaA, N-terminal domain superfamily Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 258 285 1.2E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 192 206 1.2E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 420 439 1.2E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 224 238 1.2E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 160 180 1.2E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Y11_30071 ad9d0a32003b945567d9039cbfa0623b 462 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 371 439 1.0E-32 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Y11_19081 7bc79b5fce610e0c23c5a863bab19141 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 23.97 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Y11_19081 7bc79b5fce610e0c23c5a863bab19141 157 Gene3D G3DSA:3.40.390.30 1 155 1.6E-59 T 13-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 Y11_19081 7bc79b5fce610e0c23c5a863bab19141 157 Pfam PF02130 Uncharacterized protein family UPF0054 20 144 1.5E-38 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Y11_19081 7bc79b5fce610e0c23c5a863bab19141 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 145 5.3E-36 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Y11_19081 7bc79b5fce610e0c23c5a863bab19141 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 13-10-2018 IPR020549 Endoribonuclease YbeY, conserved site Y11_19081 7bc79b5fce610e0c23c5a863bab19141 157 SUPERFAMILY SSF55486 3 151 7.81E-49 T 13-10-2018 Y11_00111 23b29570b7729fdf779add0eb006f1b1 150 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 5 150 18.841 T 13-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame Y11_00111 23b29570b7729fdf779add0eb006f1b1 150 Pfam PF04284 Protein of unknown function (DUF441) 9 147 5.8E-47 T 13-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame Y11_00111 23b29570b7729fdf779add0eb006f1b1 150 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 5 132 1.0E-34 T 13-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame Y11_10171 9a03026644a9b4c812599a22cb083750 647 ProSitePatterns PS00211 ABC transporters family signature. 601 615 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_10171 9a03026644a9b4c812599a22cb083750 647 Gene3D G3DSA:3.40.50.300 455 644 9.4E-66 T 13-10-2018 Y11_10171 9a03026644a9b4c812599a22cb083750 647 Pfam PF00664 ABC transporter transmembrane region 150 418 1.5E-54 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Y11_10171 9a03026644a9b4c812599a22cb083750 647 SUPERFAMILY SSF90123 135 447 3.27E-64 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_10171 9a03026644a9b4c812599a22cb083750 647 Gene3D G3DSA:1.20.1560.10 135 449 6.8E-72 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_10171 9a03026644a9b4c812599a22cb083750 647 Pfam PF00005 ABC transporter 480 629 1.9E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_10171 9a03026644a9b4c812599a22cb083750 647 SUPERFAMILY SSF52540 454 642 6.75E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_10171 9a03026644a9b4c812599a22cb083750 647 SMART SM00382 489 643 4.8E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_10171 9a03026644a9b4c812599a22cb083750 647 Gene3D G3DSA:3.90.70.10 6 134 6.9E-11 T 13-10-2018 Y11_12331 9a5d79723daab8281e838adb184fa1c1 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.5E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_12331 9a5d79723daab8281e838adb184fa1c1 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.5E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_12331 9a5d79723daab8281e838adb184fa1c1 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.5E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_12331 9a5d79723daab8281e838adb184fa1c1 318 SUPERFAMILY SSF46785 4 113 7.32E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_12331 9a5d79723daab8281e838adb184fa1c1 318 SUPERFAMILY SSF53850 91 294 3.02E-41 T 13-10-2018 Y11_12331 9a5d79723daab8281e838adb184fa1c1 318 Pfam PF03466 LysR substrate binding domain 90 289 8.5E-42 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_12331 9a5d79723daab8281e838adb184fa1c1 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.6E-12 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_12331 9a5d79723daab8281e838adb184fa1c1 318 Gene3D G3DSA:3.40.190.10 167 267 5.8E-86 T 13-10-2018 Y11_12331 9a5d79723daab8281e838adb184fa1c1 318 Gene3D G3DSA:3.40.190.10 92 292 5.8E-86 T 13-10-2018 Y11_12331 9a5d79723daab8281e838adb184fa1c1 318 Gene3D G3DSA:1.10.10.10 1 86 1.6E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_33231 f8200ae5128c1fbb86acebebf62dc974 170 Pfam PF01327 Polypeptide deformylase 4 152 2.0E-49 T 13-10-2018 IPR023635 Peptide deformylase Y11_33231 f8200ae5128c1fbb86acebebf62dc974 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 6.8E-65 T 13-10-2018 IPR023635 Peptide deformylase Y11_33231 f8200ae5128c1fbb86acebebf62dc974 170 PIRSF PIRSF004749 1 169 1.1E-54 T 13-10-2018 IPR023635 Peptide deformylase Y11_33231 f8200ae5128c1fbb86acebebf62dc974 170 Gene3D G3DSA:3.90.45.10 2 169 5.9E-67 T 13-10-2018 IPR036821 Peptide deformylase superfamily Y11_33231 f8200ae5128c1fbb86acebebf62dc974 170 SUPERFAMILY SSF56420 3 165 7.2E-62 T 13-10-2018 IPR036821 Peptide deformylase superfamily Y11_33231 f8200ae5128c1fbb86acebebf62dc974 170 PRINTS PR01576 Peptide deformylase signature 120 149 3.6E-38 T 13-10-2018 IPR023635 Peptide deformylase Y11_33231 f8200ae5128c1fbb86acebebf62dc974 170 PRINTS PR01576 Peptide deformylase signature 101 119 3.6E-38 T 13-10-2018 IPR023635 Peptide deformylase Y11_33231 f8200ae5128c1fbb86acebebf62dc974 170 PRINTS PR01576 Peptide deformylase signature 89 100 3.6E-38 T 13-10-2018 IPR023635 Peptide deformylase Y11_33231 f8200ae5128c1fbb86acebebf62dc974 170 PRINTS PR01576 Peptide deformylase signature 33 62 3.6E-38 T 13-10-2018 IPR023635 Peptide deformylase Y11_33231 f8200ae5128c1fbb86acebebf62dc974 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.257 T 13-10-2018 IPR023635 Peptide deformylase Y11_25701 c262e4f6a9be1686387d45ba02996560 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 6.6E-85 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Y11_25701 c262e4f6a9be1686387d45ba02996560 673 Gene3D G3DSA:3.20.20.70 3 370 1.6E-122 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_25701 c262e4f6a9be1686387d45ba02996560 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 620 634 1.8E-5 T 13-10-2018 Y11_25701 c262e4f6a9be1686387d45ba02996560 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 399 1.8E-5 T 13-10-2018 Y11_25701 c262e4f6a9be1686387d45ba02996560 673 Gene3D G3DSA:3.50.50.60 470 626 1.6E-117 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_25701 c262e4f6a9be1686387d45ba02996560 673 SUPERFAMILY SSF51395 3 363 1.18E-109 T 13-10-2018 Y11_25701 c262e4f6a9be1686387d45ba02996560 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 642 1.4E-21 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Y11_25701 c262e4f6a9be1686387d45ba02996560 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 1.4E-11 T 13-10-2018 Y11_25701 c262e4f6a9be1686387d45ba02996560 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 1.4E-11 T 13-10-2018 Y11_25701 c262e4f6a9be1686387d45ba02996560 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 516 1.4E-11 T 13-10-2018 Y11_25701 c262e4f6a9be1686387d45ba02996560 673 SUPERFAMILY SSF51905 461 651 1.56E-23 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_25701 c262e4f6a9be1686387d45ba02996560 673 Gene3D G3DSA:3.40.50.720 376 667 1.6E-117 T 13-10-2018 Y11_25701 c262e4f6a9be1686387d45ba02996560 673 SUPERFAMILY SSF51971 334 519 1.65E-40 T 13-10-2018 Y11_07871 dedc5837c42fa6f23456f303a912e8c1 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.0E-22 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Y11_07871 dedc5837c42fa6f23456f303a912e8c1 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.0E-22 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Y11_07871 dedc5837c42fa6f23456f303a912e8c1 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.0E-22 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Y11_07871 dedc5837c42fa6f23456f303a912e8c1 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.995 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Y11_07871 dedc5837c42fa6f23456f303a912e8c1 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.4E-26 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Y11_07871 dedc5837c42fa6f23456f303a912e8c1 65 Gene3D G3DSA:2.40.50.530 1 65 4.8E-19 T 13-10-2018 Y11_07871 dedc5837c42fa6f23456f303a912e8c1 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 13-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_07871 dedc5837c42fa6f23456f303a912e8c1 65 Pfam PF01632 Ribosomal protein L35 2 60 1.4E-22 T 13-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_07871 dedc5837c42fa6f23456f303a912e8c1 65 SUPERFAMILY SSF143034 2 64 3.14E-22 T 13-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_40951 fe881d17d253d8dcde086e005c3b729f 110 SUPERFAMILY SSF158452 1 108 2.62E-38 T 13-10-2018 IPR036814 YqcC-like superfamily Y11_40951 fe881d17d253d8dcde086e005c3b729f 110 Gene3D G3DSA:1.20.1440.40 1 106 5.0E-35 T 13-10-2018 IPR036814 YqcC-like superfamily Y11_40951 fe881d17d253d8dcde086e005c3b729f 110 PIRSF PIRSF006257 1 109 1.3E-41 T 13-10-2018 IPR007384 Protein of unknown function UCP006257 Y11_40951 fe881d17d253d8dcde086e005c3b729f 110 Pfam PF04287 tRNA pseudouridine synthase C 6 104 8.2E-35 T 13-10-2018 IPR023376 YqcC-like domain Y11_16311 aab55a8201a50483caa6dde0b89a3497 185 Gene3D G3DSA:3.30.70.1710 80 185 2.2E-36 T 13-10-2018 Y11_16311 aab55a8201a50483caa6dde0b89a3497 185 Pfam PF00936 BMC domain 96 173 1.6E-21 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Y11_16311 aab55a8201a50483caa6dde0b89a3497 185 Pfam PF00936 BMC domain 4 76 3.1E-19 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Y11_16311 aab55a8201a50483caa6dde0b89a3497 185 SMART SM00877 95 173 9.2E-28 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Y11_16311 aab55a8201a50483caa6dde0b89a3497 185 SMART SM00877 3 77 8.6E-21 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Y11_16311 aab55a8201a50483caa6dde0b89a3497 185 Gene3D G3DSA:3.30.70.1710 1 79 2.5E-27 T 13-10-2018 Y11_16311 aab55a8201a50483caa6dde0b89a3497 185 SUPERFAMILY SSF143414 3 92 1.44E-22 T 13-10-2018 IPR037233 CcmK-like superfamily Y11_16311 aab55a8201a50483caa6dde0b89a3497 185 PIRSF PIRSF034834 1 183 7.8E-74 T 13-10-2018 IPR011238 Polyhedral organelle shell protein PduT Y11_16311 aab55a8201a50483caa6dde0b89a3497 185 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 66 6.0E-22 T 13-10-2018 Y11_16311 aab55a8201a50483caa6dde0b89a3497 185 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 95 158 8.0E-22 T 13-10-2018 Y11_16311 aab55a8201a50483caa6dde0b89a3497 185 SUPERFAMILY SSF143414 95 181 1.44E-23 T 13-10-2018 IPR037233 CcmK-like superfamily Y11_29771 18d895106b9584dfc3dd311297d55169 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 1.5E-6 T 13-10-2018 IPR001451 Hexapeptide repeat Y11_29771 18d895106b9584dfc3dd311297d55169 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 299 1.5E-4 T 13-10-2018 IPR001451 Hexapeptide repeat Y11_29771 18d895106b9584dfc3dd311297d55169 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 322 352 8.5E-4 T 13-10-2018 IPR001451 Hexapeptide repeat Y11_29771 18d895106b9584dfc3dd311297d55169 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 43.112 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Y11_29771 18d895106b9584dfc3dd311297d55169 456 SUPERFAMILY SSF51161 255 437 3.99E-51 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Y11_29771 18d895106b9584dfc3dd311297d55169 456 Pfam PF12804 MobA-like NTP transferase domain 8 123 1.1E-22 T 13-10-2018 IPR025877 MobA-like NTP transferase Y11_29771 18d895106b9584dfc3dd311297d55169 456 SUPERFAMILY SSF53448 5 252 3.42E-67 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_29771 18d895106b9584dfc3dd311297d55169 456 Gene3D G3DSA:3.90.550.10 1 227 1.7E-73 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_29771 18d895106b9584dfc3dd311297d55169 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Y11_29771 18d895106b9584dfc3dd311297d55169 456 Gene3D G3DSA:2.160.10.10 228 456 5.6E-71 T 13-10-2018 Y11_29771 18d895106b9584dfc3dd311297d55169 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 3.7E-204 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Y11_06481 92d75cef0391c702ccb047572b282a4a 77 Gene3D G3DSA:1.20.58.250 1 76 4.0E-36 T 13-10-2018 IPR036745 DNA polymerase III-theta superfamily GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_06481 92d75cef0391c702ccb047572b282a4a 77 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 4 76 2.0E-32 T 13-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_06481 92d75cef0391c702ccb047572b282a4a 77 Pfam PF06440 DNA polymerase III, theta subunit 3 71 1.6E-37 T 13-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_06481 92d75cef0391c702ccb047572b282a4a 77 SUPERFAMILY SSF46575 1 76 1.05E-34 T 13-10-2018 Y11_31191 f7bc91c3a545204139ab37fdb4f692a2 245 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 240 4.1E-82 T 13-10-2018 IPR017746 Cellulose synthase operon protein BcsQ Y11_31191 f7bc91c3a545204139ab37fdb4f692a2 245 SUPERFAMILY SSF52540 1 236 2.05E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_31191 f7bc91c3a545204139ab37fdb4f692a2 245 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 237 2.6E-110 T 13-10-2018 IPR017746 Cellulose synthase operon protein BcsQ Y11_31191 f7bc91c3a545204139ab37fdb4f692a2 245 Gene3D G3DSA:3.40.50.300 1 242 5.5E-29 T 13-10-2018 Y11_27761 5aed224ebe17709d789e52fc9ff5f308 548 Gene3D G3DSA:3.40.50.10490 98 291 1.2E-241 T 13-10-2018 Y11_27761 5aed224ebe17709d789e52fc9ff5f308 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_27761 5aed224ebe17709d789e52fc9ff5f308 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_27761 5aed224ebe17709d789e52fc9ff5f308 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.825 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_27761 5aed224ebe17709d789e52fc9ff5f308 548 Gene3D G3DSA:1.10.1390.10 507 547 1.9E-20 T 13-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_27761 5aed224ebe17709d789e52fc9ff5f308 548 Pfam PF00342 Phosphoglucose isomerase 52 541 5.8E-257 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_27761 5aed224ebe17709d789e52fc9ff5f308 548 Gene3D G3DSA:3.40.50.10490 11 506 1.2E-241 T 13-10-2018 Y11_27761 5aed224ebe17709d789e52fc9ff5f308 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 1.5E-55 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_27761 5aed224ebe17709d789e52fc9ff5f308 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 1.5E-55 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_27761 5aed224ebe17709d789e52fc9ff5f308 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 1.5E-55 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_27761 5aed224ebe17709d789e52fc9ff5f308 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 1.5E-55 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_27761 5aed224ebe17709d789e52fc9ff5f308 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 1.5E-55 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_27761 5aed224ebe17709d789e52fc9ff5f308 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 1.5E-55 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_27761 5aed224ebe17709d789e52fc9ff5f308 548 SUPERFAMILY SSF53697 5 547 5.0E-227 T 13-10-2018 Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 Pfam PF00364 Biotin-requiring enzyme 106 175 4.3E-22 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 Pfam PF00364 Biotin-requiring enzyme 199 268 1.6E-21 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 Pfam PF00364 Biotin-requiring enzyme 4 73 1.5E-21 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 Pfam PF02817 e3 binding domain 316 351 5.2E-15 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 Gene3D G3DSA:3.30.559.10 372 620 8.4E-100 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 Gene3D G3DSA:2.40.50.100 103 182 1.0E-20 T 13-10-2018 Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 Gene3D G3DSA:2.40.50.100 196 275 1.9E-20 T 13-10-2018 Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 Gene3D G3DSA:2.40.50.100 1 80 2.9E-21 T 13-10-2018 Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 SUPERFAMILY SSF51230 1 94 2.36E-23 T 13-10-2018 IPR011053 Single hybrid motif Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 Gene3D G3DSA:4.10.320.10 316 361 4.4E-22 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 SUPERFAMILY SSF51230 104 195 1.44E-22 T 13-10-2018 IPR011053 Single hybrid motif Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 220 249 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 SUPERFAMILY SSF47005 310 355 2.75E-13 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 179 620 1.7E-226 T 13-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 389 619 7.4E-79 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 SUPERFAMILY SSF52777 378 619 8.45E-80 T 13-10-2018 Y11_39311 cdc57b01bb6a72261196e3764c3f88bd 620 SUPERFAMILY SSF51230 197 289 1.15E-22 T 13-10-2018 IPR011053 Single hybrid motif Y11_03161 369cc40d74f69407219e2da655ec2e84 190 Gene3D G3DSA:2.30.30.30 1 65 2.9E-14 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Y11_03161 369cc40d74f69407219e2da655ec2e84 190 SUPERFAMILY SSF50249 132 189 1.88E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_03161 369cc40d74f69407219e2da655ec2e84 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 61 1.0E-15 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like Y11_03161 369cc40d74f69407219e2da655ec2e84 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 13-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Y11_03161 369cc40d74f69407219e2da655ec2e84 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 1.2E-13 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Y11_03161 369cc40d74f69407219e2da655ec2e84 190 SUPERFAMILY SSF50104 1 64 4.63E-10 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Y11_03161 369cc40d74f69407219e2da655ec2e84 190 PIRSF PIRSF005901 1 190 1.5E-59 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP Y11_03161 369cc40d74f69407219e2da655ec2e84 190 SUPERFAMILY SSF50249 67 130 4.71E-11 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_03161 369cc40d74f69407219e2da655ec2e84 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 43.023 T 13-10-2018 IPR011897 Translation elongation factor P-like, YeiP Y11_03161 369cc40d74f69407219e2da655ec2e84 190 Gene3D G3DSA:2.40.50.140 132 189 9.3E-20 T 13-10-2018 Y11_03161 369cc40d74f69407219e2da655ec2e84 190 SMART SM01185 69 125 7.3E-14 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Y11_03161 369cc40d74f69407219e2da655ec2e84 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 2.1E-97 T 13-10-2018 IPR011897 Translation elongation factor P-like, YeiP Y11_03161 369cc40d74f69407219e2da655ec2e84 190 SMART SM00841 133 188 3.3E-24 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Y11_03161 369cc40d74f69407219e2da655ec2e84 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 1.1E-17 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Y11_03161 369cc40d74f69407219e2da655ec2e84 190 Gene3D G3DSA:2.40.50.140 66 130 2.2E-15 T 13-10-2018 Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 SUPERFAMILY SSF52935 323 469 5.23E-34 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 3.8E-77 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 3.8E-77 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 3.8E-77 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 3.8E-77 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 3.8E-77 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 3.8E-77 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 3.8E-77 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 Gene3D G3DSA:3.40.1380.20 336 467 1.7E-44 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 SUPERFAMILY SSF50800 70 167 2.27E-29 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 6.4E-186 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 13-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 3.7E-27 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 Gene3D G3DSA:2.40.33.10 71 167 3.7E-146 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 1.9E-153 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 Gene3D G3DSA:3.20.20.60 4 332 3.7E-146 T 13-10-2018 Y11_08251 c2ebd05ee56672f0da62a9c4ebf6e145 470 SUPERFAMILY SSF51621 1 338 1.54E-101 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Y11_37721 a26bcdd6da1291ab8c36d772fd2818fd 355 SUPERFAMILY SSF82549 11 352 7.59E-125 T 13-10-2018 Y11_37721 a26bcdd6da1291ab8c36d772fd2818fd 355 Pfam PF02733 Dak1 domain 17 351 1.5E-126 T 13-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Y11_37721 a26bcdd6da1291ab8c36d772fd2818fd 355 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 352 4.0E-149 T 13-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 Y11_37721 a26bcdd6da1291ab8c36d772fd2818fd 355 Gene3D G3DSA:3.40.50.10440 11 183 6.3E-64 T 13-10-2018 Y11_37721 a26bcdd6da1291ab8c36d772fd2818fd 355 Gene3D G3DSA:3.30.1180.20 184 355 1.6E-62 T 13-10-2018 Y11_15661 e84dde4ab9bc57c7e9b0608771c751c5 449 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 446 1.7E-138 T 13-10-2018 IPR010263 Type VI secretion protein, VC_A0114 Y11_15661 e84dde4ab9bc57c7e9b0608771c751c5 449 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 4 447 2.9E-137 T 13-10-2018 IPR010263 Type VI secretion protein, VC_A0114 Y11_18601 8dc5d408a085ec888072625d0cbb3f0c 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 932 2.5E-52 T 13-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Y11_18601 8dc5d408a085ec888072625d0cbb3f0c 935 SMART SM00861 593 786 8.9E-62 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Y11_18601 8dc5d408a085ec888072625d0cbb3f0c 935 Gene3D G3DSA:3.40.50.970 167 533 1.9E-148 T 13-10-2018 Y11_18601 8dc5d408a085ec888072625d0cbb3f0c 935 Gene3D G3DSA:3.40.50.11610 723 929 2.5E-170 T 13-10-2018 Y11_18601 8dc5d408a085ec888072625d0cbb3f0c 935 Pfam PF00676 Dehydrogenase E1 component 223 512 2.6E-50 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Y11_18601 8dc5d408a085ec888072625d0cbb3f0c 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 49 1.6E-15 T 13-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Y11_18601 8dc5d408a085ec888072625d0cbb3f0c 935 PIRSF PIRSF000157 1 934 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Y11_18601 8dc5d408a085ec888072625d0cbb3f0c 935 Gene3D G3DSA:1.10.287.1150 84 166 4.9E-30 T 13-10-2018 Y11_18601 8dc5d408a085ec888072625d0cbb3f0c 935 SUPERFAMILY SSF52518 577 793 1.09E-50 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_18601 8dc5d408a085ec888072625d0cbb3f0c 935 Gene3D G3DSA:3.40.50.12470 556 802 2.5E-170 T 13-10-2018 Y11_18601 8dc5d408a085ec888072625d0cbb3f0c 935 Pfam PF02779 Transketolase, pyrimidine binding domain 592 787 2.4E-65 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Y11_18601 8dc5d408a085ec888072625d0cbb3f0c 935 SUPERFAMILY SSF52518 120 540 1.26E-88 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_18601 8dc5d408a085ec888072625d0cbb3f0c 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Y11_39781 3d06368022413e288297b8acf3cc152d 425 SUPERFAMILY SSF53335 57 417 9.17E-81 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_39781 3d06368022413e288297b8acf3cc152d 425 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 402 412 - T 13-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site Y11_39781 3d06368022413e288297b8acf3cc152d 425 Gene3D G3DSA:3.40.1350.30 116 252 1.8E-116 T 13-10-2018 Y11_39781 3d06368022413e288297b8acf3cc152d 425 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 6 412 1.9E-133 T 13-10-2018 Y11_39781 3d06368022413e288297b8acf3cc152d 425 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 248 417 5.0E-23 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Y11_39781 3d06368022413e288297b8acf3cc152d 425 SUPERFAMILY SSF50249 1 48 7.42E-11 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_39781 3d06368022413e288297b8acf3cc152d 425 Pfam PF01938 TRAM domain 1 48 7.4E-9 T 13-10-2018 IPR002792 TRAM domain Y11_39781 3d06368022413e288297b8acf3cc152d 425 Gene3D G3DSA:2.40.50.140 1 69 9.3E-24 T 13-10-2018 Y11_39781 3d06368022413e288297b8acf3cc152d 425 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 1 420 61.823 T 13-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 Y11_39781 3d06368022413e288297b8acf3cc152d 425 Gene3D G3DSA:3.40.50.150 70 414 1.8E-116 T 13-10-2018 Y11_39781 3d06368022413e288297b8acf3cc152d 425 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 351 381 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site Y11_03261 e124f3ad64ac883993b34498296eacc9 227 Gene3D G3DSA:3.40.50.2300 94 205 4.9E-39 T 13-10-2018 Y11_03261 e124f3ad64ac883993b34498296eacc9 227 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 107 193 3.9E-19 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Y11_03261 e124f3ad64ac883993b34498296eacc9 227 SUPERFAMILY SSF52794 4 88 2.59E-10 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Y11_03261 e124f3ad64ac883993b34498296eacc9 227 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 106 189 5.5E-40 T 13-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 Y11_03261 e124f3ad64ac883993b34498296eacc9 227 SUPERFAMILY SSF52794 104 204 1.92E-35 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Y11_03551 e30d9919aaa1db62921eb67453638aa2 431 TIGRFAM TIGR00814 stp: serine transporter 20 419 8.9E-180 T 13-10-2018 IPR004694 Hydroxy amino acid transporter GO:0006865|GO:0015171|GO:0016021 Y11_03551 e30d9919aaa1db62921eb67453638aa2 431 Pfam PF03222 Tryptophan/tyrosine permease family 32 397 1.3E-10 T 13-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 Gene3D G3DSA:3.20.20.10 33 279 3.7E-144 T 13-10-2018 IPR029066 PLP-binding barrel Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 46 275 1.0E-56 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 276 376 8.0E-25 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 418 3.5E-128 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 5.4E-20 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 5.4E-20 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 5.4E-20 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 5.4E-20 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 5.4E-20 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 214 229 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 Gene3D G3DSA:2.40.37.10 22 416 3.7E-144 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 2.8E-26 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 2.8E-26 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 2.8E-26 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 2.8E-26 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 38.358 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 SUPERFAMILY SSF51419 25 277 7.27E-55 T 13-10-2018 IPR029066 PLP-binding barrel Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 SUPERFAMILY SSF50621 251 419 1.17E-57 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Y11_40561 050d62ccdf1c4aa86902b3794f66f1be 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Y11_05181 124776eaec73686beca685805fca4f1e 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 47.106 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_05181 124776eaec73686beca685805fca4f1e 348 PIRSF PIRSF001237 4 348 1.1E-141 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_05181 124776eaec73686beca685805fca4f1e 348 Pfam PF01979 Amidohydrolase family 15 307 1.5E-17 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Y11_05181 124776eaec73686beca685805fca4f1e 348 Gene3D G3DSA:3.20.20.140 6 348 2.3E-105 T 13-10-2018 Y11_05181 124776eaec73686beca685805fca4f1e 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_05181 124776eaec73686beca685805fca4f1e 348 SUPERFAMILY SSF51556 6 347 4.54E-146 T 13-10-2018 IPR032466 Metal-dependent hydrolase Y11_05181 124776eaec73686beca685805fca4f1e 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 8.0E-151 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_10771 44811604979613aaca9323c602db15f7 338 Pfam PF02885 Glycosyl transferase family, helical bundle domain 10 68 6.4E-12 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_10771 44811604979613aaca9323c602db15f7 338 Gene3D G3DSA:3.40.1030.10 73 326 2.2E-122 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_10771 44811604979613aaca9323c602db15f7 338 Gene3D G3DSA:1.20.970.10 17 189 2.2E-122 T 13-10-2018 Y11_10771 44811604979613aaca9323c602db15f7 338 SUPERFAMILY SSF52418 76 334 1.26E-90 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_10771 44811604979613aaca9323c602db15f7 338 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 11 335 2.2E-124 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Y11_10771 44811604979613aaca9323c602db15f7 338 SUPERFAMILY SSF47648 10 73 3.4E-14 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_10771 44811604979613aaca9323c602db15f7 338 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 9 337 38.753 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Y11_10771 44811604979613aaca9323c602db15f7 338 Pfam PF00591 Glycosyl transferase family, a/b domain 80 326 6.0E-98 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_36731 10d1d09f7c561a4cc345db7ae0348627 329 SUPERFAMILY SSF88697 251 310 3.43E-14 T 13-10-2018 IPR015947 PUA-like superfamily Y11_36731 10d1d09f7c561a4cc345db7ae0348627 329 Gene3D G3DSA:3.30.2350.10 1 249 1.5E-92 T 13-10-2018 Y11_36731 10d1d09f7c561a4cc345db7ae0348627 329 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 1.1E-88 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_36731 10d1d09f7c561a4cc345db7ae0348627 329 SUPERFAMILY SSF55120 10 248 1.3E-80 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_36731 10d1d09f7c561a4cc345db7ae0348627 329 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.75 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_36731 10d1d09f7c561a4cc345db7ae0348627 329 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 3.3E-56 T 13-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Y11_36731 10d1d09f7c561a4cc345db7ae0348627 329 Gene3D G3DSA:2.30.130.10 250 314 6.0E-28 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 Y11_36731 10d1d09f7c561a4cc345db7ae0348627 329 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 2.4E-20 T 13-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_36731 10d1d09f7c561a4cc345db7ae0348627 329 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 248 7.4E-24 T 13-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 Y11_05091 f59a71f07b06a823c3614aa10cfe93d7 1027 SUPERFAMILY SSF50692 878 1003 4.07E-28 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Y11_05091 f59a71f07b06a823c3614aa10cfe93d7 1027 SUPERFAMILY SSF53706 74 896 5.07E-111 T 13-10-2018 Y11_05091 f59a71f07b06a823c3614aa10cfe93d7 1027 Pfam PF00384 Molybdopterin oxidoreductase 243 688 3.2E-13 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_05091 f59a71f07b06a823c3614aa10cfe93d7 1027 Gene3D G3DSA:2.40.40.20 854 1002 1.9E-25 T 13-10-2018 Y11_05091 f59a71f07b06a823c3614aa10cfe93d7 1027 SMART SM00926 71 153 6.4E-14 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_05091 f59a71f07b06a823c3614aa10cfe93d7 1027 Pfam PF01568 Molydopterin dinucleotide binding domain 895 998 4.9E-16 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Y11_05091 f59a71f07b06a823c3614aa10cfe93d7 1027 Gene3D G3DSA:3.40.50.740 598 701 1.8E-12 T 13-10-2018 Y11_23251 0b801ef0853ed48953d072edd3775ae7 109 SMART SM00418 21 99 2.3E-26 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Y11_23251 0b801ef0853ed48953d072edd3775ae7 109 Pfam PF01022 Bacterial regulatory protein, arsR family 29 74 2.3E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Y11_23251 0b801ef0853ed48953d072edd3775ae7 109 Gene3D G3DSA:1.10.10.10 1 107 3.0E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_23251 0b801ef0853ed48953d072edd3775ae7 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 70 85 1.8E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Y11_23251 0b801ef0853ed48953d072edd3775ae7 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 23 38 1.8E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Y11_23251 0b801ef0853ed48953d072edd3775ae7 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.8E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Y11_23251 0b801ef0853ed48953d072edd3775ae7 109 SUPERFAMILY SSF46785 10 103 7.42E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_00051 fe99e26c7a65c15f89f79984929d4b7e 156 SUPERFAMILY SSF52833 3 153 2.86E-48 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_00051 fe99e26c7a65c15f89f79984929d4b7e 156 Pfam PF00578 AhpC/TSA family 7 134 2.4E-38 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Y11_00051 fe99e26c7a65c15f89f79984929d4b7e 156 Gene3D G3DSA:3.40.30.10 4 155 5.4E-47 T 13-10-2018 Y11_00051 fe99e26c7a65c15f89f79984929d4b7e 156 PIRSF PIRSF000239 1 149 1.1E-16 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Y11_40571 b5e308f400f0d19f868a804e71c33fcf 344 SUPERFAMILY SSF47413 1 59 9.0E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_40571 b5e308f400f0d19f868a804e71c33fcf 344 Gene3D G3DSA:3.40.50.2300 160 289 6.5E-73 T 13-10-2018 Y11_40571 b5e308f400f0d19f868a804e71c33fcf 344 SMART SM00354 1 71 3.2E-37 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_40571 b5e308f400f0d19f868a804e71c33fcf 344 Pfam PF13377 Periplasmic binding protein-like domain 168 329 1.6E-34 T 13-10-2018 Y11_40571 b5e308f400f0d19f868a804e71c33fcf 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 Y11_40571 b5e308f400f0d19f868a804e71c33fcf 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.9E-21 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_40571 b5e308f400f0d19f868a804e71c33fcf 344 SUPERFAMILY SSF53822 60 333 1.57E-86 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_40571 b5e308f400f0d19f868a804e71c33fcf 344 Gene3D G3DSA:3.40.50.2300 61 305 6.5E-73 T 13-10-2018 Y11_40571 b5e308f400f0d19f868a804e71c33fcf 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.3E-7 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_40571 b5e308f400f0d19f868a804e71c33fcf 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.3E-7 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_40571 b5e308f400f0d19f868a804e71c33fcf 344 Gene3D G3DSA:1.10.260.40 3 59 4.8E-23 T 13-10-2018 Y11_24391 4e3bc655d68d058007764c816b2ecc64 105 Pfam PF01527 Transposase 6 79 5.4E-14 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Y11_24391 4e3bc655d68d058007764c816b2ecc64 105 SUPERFAMILY SSF46689 8 96 2.51E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_24391 4e3bc655d68d058007764c816b2ecc64 105 Gene3D G3DSA:1.10.10.60 12 95 1.4E-5 T 13-10-2018 Y11_38581 949b8cef2e9b93b703a156b24fd30bd9 292 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 51.404 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Y11_38581 949b8cef2e9b93b703a156b24fd30bd9 292 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 271 6.4E-149 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Y11_38581 949b8cef2e9b93b703a156b24fd30bd9 292 Gene3D G3DSA:3.60.21.10 1 279 1.8E-82 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Y11_38581 949b8cef2e9b93b703a156b24fd30bd9 292 SUPERFAMILY SSF56300 1 261 3.01E-57 T 13-10-2018 Y11_38581 949b8cef2e9b93b703a156b24fd30bd9 292 Pfam PF00149 Calcineurin-like phosphoesterase 2 136 1.3E-13 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Y11_38581 949b8cef2e9b93b703a156b24fd30bd9 292 PIRSF PIRSF000903 1 275 2.4E-121 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Y11_39721 59c3d6e3e097bfd614828e26377b13f1 287 SUPERFAMILY SSF53807 35 276 3.36E-55 T 13-10-2018 Y11_39721 59c3d6e3e097bfd614828e26377b13f1 287 Pfam PF01497 Periplasmic binding protein 38 235 1.4E-24 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain Y11_39721 59c3d6e3e097bfd614828e26377b13f1 287 Gene3D G3DSA:3.40.50.1980 34 153 3.5E-37 T 13-10-2018 Y11_39721 59c3d6e3e097bfd614828e26377b13f1 287 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 15 280 51.223 T 13-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 Y11_39721 59c3d6e3e097bfd614828e26377b13f1 287 Gene3D G3DSA:3.40.50.1980 155 279 1.5E-32 T 13-10-2018 Y11_14211 c627cc33a315acf44954c183e2cc902d 330 SUPERFAMILY SSF48029 113 323 8.76E-64 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Y11_14211 c627cc33a315acf44954c183e2cc902d 330 SUPERFAMILY SSF48029 4 103 4.71E-21 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Y11_14211 c627cc33a315acf44954c183e2cc902d 330 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 330 2.8E-139 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Y11_14211 c627cc33a315acf44954c183e2cc902d 330 Gene3D G3DSA:1.10.220.30 88 190 1.9E-26 T 13-10-2018 Y11_14211 c627cc33a315acf44954c183e2cc902d 330 Gene3D G3DSA:1.10.220.30 1 82 2.9E-20 T 13-10-2018 Y11_14211 c627cc33a315acf44954c183e2cc902d 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 1.1E-73 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Y11_14211 c627cc33a315acf44954c183e2cc902d 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 1.1E-73 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Y11_14211 c627cc33a315acf44954c183e2cc902d 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 1.1E-73 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Y11_14211 c627cc33a315acf44954c183e2cc902d 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 1.1E-73 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Y11_14211 c627cc33a315acf44954c183e2cc902d 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 1.1E-73 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Y11_14211 c627cc33a315acf44954c183e2cc902d 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 1.1E-73 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Y11_14211 c627cc33a315acf44954c183e2cc902d 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 1.1E-73 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Y11_14211 c627cc33a315acf44954c183e2cc902d 330 Pfam PF14842 FliG N-terminal domain 3 102 2.5E-31 T 13-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Y11_14211 c627cc33a315acf44954c183e2cc902d 330 Pfam PF01706 FliG C-terminal domain 216 322 2.6E-37 T 13-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Y11_14211 c627cc33a315acf44954c183e2cc902d 330 Gene3D G3DSA:1.10.220.30 193 329 2.9E-42 T 13-10-2018 Y11_14211 c627cc33a315acf44954c183e2cc902d 330 PIRSF PIRSF003161 1 330 1.5E-117 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Y11_14211 c627cc33a315acf44954c183e2cc902d 330 Pfam PF14841 FliG middle domain 114 186 7.0E-25 T 13-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Y11_42281 74f6a49c08049650cb796b25854f4d0a 533 Gene3D G3DSA:3.50.50.60 10 404 4.6E-153 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_42281 74f6a49c08049650cb796b25854f4d0a 533 SUPERFAMILY SSF46977 425 525 1.57E-31 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_42281 74f6a49c08049650cb796b25854f4d0a 533 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 1.8E-14 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_42281 74f6a49c08049650cb796b25854f4d0a 533 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 9 520 8.2E-222 T 13-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 Y11_42281 74f6a49c08049650cb796b25854f4d0a 533 SUPERFAMILY SSF51905 6 447 9.34E-73 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_42281 74f6a49c08049650cb796b25854f4d0a 533 Gene3D G3DSA:1.20.58.100 425 533 4.8E-46 T 13-10-2018 Y11_42281 74f6a49c08049650cb796b25854f4d0a 533 Gene3D G3DSA:3.90.700.10 248 358 4.6E-153 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_42281 74f6a49c08049650cb796b25854f4d0a 533 Pfam PF00890 FAD binding domain 10 392 6.8E-100 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_42281 74f6a49c08049650cb796b25854f4d0a 533 SUPERFAMILY SSF56425 238 353 7.92E-41 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_42281 74f6a49c08049650cb796b25854f4d0a 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.2E-9 T 13-10-2018 Y11_42281 74f6a49c08049650cb796b25854f4d0a 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.2E-9 T 13-10-2018 Y11_42281 74f6a49c08049650cb796b25854f4d0a 533 PIRSF PIRSF000171 1 250 4.9E-22 T 13-10-2018 Y11_42281 74f6a49c08049650cb796b25854f4d0a 533 PIRSF PIRSF000171 339 531 1.0E-12 T 13-10-2018 Y11_29421 1a1d1d4f5bb5bfde9af4d9dc005061e6 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Y11_29421 1a1d1d4f5bb5bfde9af4d9dc005061e6 207 Gene3D G3DSA:3.40.30.10 18 207 1.0E-53 T 13-10-2018 Y11_29421 1a1d1d4f5bb5bfde9af4d9dc005061e6 207 PIRSF PIRSF001488 1 207 1.4E-90 T 13-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL Y11_29421 1a1d1d4f5bb5bfde9af4d9dc005061e6 207 SUPERFAMILY SSF52833 20 204 5.37E-46 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_29421 1a1d1d4f5bb5bfde9af4d9dc005061e6 207 Pfam PF01323 DSBA-like thioredoxin domain 40 195 8.6E-29 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Y11_32221 d365fb97fe198210614064ff3f9e71de 225 SUPERFAMILY SSF56784 6 217 5.24E-43 T 13-10-2018 IPR036412 HAD-like superfamily Y11_32221 d365fb97fe198210614064ff3f9e71de 225 Gene3D G3DSA:3.40.50.1000 9 201 5.5E-25 T 13-10-2018 IPR023214 HAD superfamily Y11_32221 d365fb97fe198210614064ff3f9e71de 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 3.0E-13 T 13-10-2018 Y11_32221 d365fb97fe198210614064ff3f9e71de 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 4.4E-16 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_32221 d365fb97fe198210614064ff3f9e71de 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 5.3E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_32221 d365fb97fe198210614064ff3f9e71de 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 5.3E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_32221 d365fb97fe198210614064ff3f9e71de 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 5.3E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_32221 d365fb97fe198210614064ff3f9e71de 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 181 194 5.3E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_32221 d365fb97fe198210614064ff3f9e71de 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 5.3E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_39151 8dacca3dbf5ed3ff050e1a9e11bdccb0 128 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Y11_39151 8dacca3dbf5ed3ff050e1a9e11bdccb0 128 SUPERFAMILY SSF55811 2 126 2.3E-36 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Y11_39151 8dacca3dbf5ed3ff050e1a9e11bdccb0 128 Gene3D G3DSA:3.90.79.10 1 127 2.6E-37 T 13-10-2018 Y11_39151 8dacca3dbf5ed3ff050e1a9e11bdccb0 128 Pfam PF00293 NUDIX domain 6 124 1.0E-20 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Y11_39151 8dacca3dbf5ed3ff050e1a9e11bdccb0 128 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 126 9.5E-50 T 13-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 Y11_39151 8dacca3dbf5ed3ff050e1a9e11bdccb0 128 PRINTS PR01401 Mutator MutT protein signature 77 90 2.4E-11 T 13-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 Y11_39151 8dacca3dbf5ed3ff050e1a9e11bdccb0 128 PRINTS PR01401 Mutator MutT protein signature 2 23 2.4E-11 T 13-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 Y11_39151 8dacca3dbf5ed3ff050e1a9e11bdccb0 128 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.2E-9 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Y11_39151 8dacca3dbf5ed3ff050e1a9e11bdccb0 128 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.2E-9 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Y11_18191 0400b55d979551e9a1c114d559dfeeb9 435 SUPERFAMILY SSF53383 11 433 1.55E-136 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_18191 0400b55d979551e9a1c114d559dfeeb9 435 PIRSF PIRSF000521 40 433 6.7E-29 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Y11_18191 0400b55d979551e9a1c114d559dfeeb9 435 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 289 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Y11_18191 0400b55d979551e9a1c114d559dfeeb9 435 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 11 434 51.684 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 Y11_18191 0400b55d979551e9a1c114d559dfeeb9 435 Gene3D G3DSA:3.40.640.10 71 340 1.5E-176 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_18191 0400b55d979551e9a1c114d559dfeeb9 435 Pfam PF00202 Aminotransferase class-III 37 428 1.9E-131 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Y11_18191 0400b55d979551e9a1c114d559dfeeb9 435 Gene3D G3DSA:3.90.1150.10 20 425 1.5E-176 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_18191 0400b55d979551e9a1c114d559dfeeb9 435 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 23 431 7.5E-186 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 Y11_22121 128967e3edcdae76cd4d883f5009dcfb 532 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 532 229.848 T 13-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Y11_22121 128967e3edcdae76cd4d883f5009dcfb 532 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 19 527 2.6E-254 T 13-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Y11_22121 128967e3edcdae76cd4d883f5009dcfb 532 Gene3D G3DSA:3.30.590.20 30 530 7.3E-190 T 13-10-2018 Y11_22121 128967e3edcdae76cd4d883f5009dcfb 532 SUPERFAMILY SSF55931 17 527 1.57E-203 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Y11_22121 128967e3edcdae76cd4d883f5009dcfb 532 Pfam PF04262 Glutamate-cysteine ligase 23 393 2.0E-172 T 13-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Y11_21921 192bd9c4a1b08728fe1456f3d5361df7 325 Gene3D G3DSA:3.30.2350.10 85 316 4.7E-71 T 13-10-2018 Y11_21921 192bd9c4a1b08728fe1456f3d5361df7 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_21921 192bd9c4a1b08728fe1456f3d5361df7 325 Pfam PF01479 S4 domain 18 65 1.7E-11 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_21921 192bd9c4a1b08728fe1456f3d5361df7 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 313 9.9E-108 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_21921 192bd9c4a1b08728fe1456f3d5361df7 325 Gene3D G3DSA:3.10.290.10 2 76 4.6E-26 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Y11_21921 192bd9c4a1b08728fe1456f3d5361df7 325 SUPERFAMILY SSF55120 77 321 3.5E-79 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_21921 192bd9c4a1b08728fe1456f3d5361df7 325 SMART SM00363 18 83 4.1E-11 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_21921 192bd9c4a1b08728fe1456f3d5361df7 325 Pfam PF00849 RNA pseudouridylate synthase 92 242 2.7E-32 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_21921 192bd9c4a1b08728fe1456f3d5361df7 325 SUPERFAMILY SSF55174 17 69 1.6E-11 T 13-10-2018 Y11_20491 51a76a29e69bd786efe85c1f97dc8a43 628 Pfam PF13145 PPIC-type PPIASE domain 249 370 7.7E-25 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Y11_20491 51a76a29e69bd786efe85c1f97dc8a43 628 Gene3D G3DSA:3.10.50.40 266 366 2.7E-30 T 13-10-2018 Y11_20491 51a76a29e69bd786efe85c1f97dc8a43 628 SUPERFAMILY SSF109998 39 240 3.27E-36 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Y11_20491 51a76a29e69bd786efe85c1f97dc8a43 628 SUPERFAMILY SSF54534 225 356 4.32E-23 T 13-10-2018 Y11_20491 51a76a29e69bd786efe85c1f97dc8a43 628 Pfam PF13624 SurA N-terminal domain 1 166 3.3E-53 T 13-10-2018 Y11_36801 3c5daec21419c6ef83a7d33a08ea8c13 404 Gene3D G3DSA:2.40.50.100 56 90 2.3E-27 T 13-10-2018 Y11_36801 3c5daec21419c6ef83a7d33a08ea8c13 404 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 95 397 9.7E-73 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Y11_36801 3c5daec21419c6ef83a7d33a08ea8c13 404 Gene3D G3DSA:2.20.200.10 212 285 5.0E-25 T 13-10-2018 Y11_36801 3c5daec21419c6ef83a7d33a08ea8c13 404 SUPERFAMILY SSF56954 2 398 3.27E-64 T 13-10-2018 Y11_36801 3c5daec21419c6ef83a7d33a08ea8c13 404 Gene3D G3DSA:1.10.287.470 91 158 2.3E-27 T 13-10-2018 Y11_36801 3c5daec21419c6ef83a7d33a08ea8c13 404 Pfam PF13533 Biotin-lipoyl like 60 105 7.8E-10 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Y11_36801 3c5daec21419c6ef83a7d33a08ea8c13 404 Pfam PF02321 Outer membrane efflux protein 216 395 1.1E-28 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Y11_36801 3c5daec21419c6ef83a7d33a08ea8c13 404 Gene3D G3DSA:1.20.1600.10 286 403 1.4E-30 T 13-10-2018 Y11_37851 2206e865123d043c290ec4853b510b2c 444 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 16 99 1.4E-21 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 Y11_37851 2206e865123d043c290ec4853b510b2c 444 Pfam PF02378 Phosphotransferase system, EIIC 98 383 6.2E-48 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Y11_37851 2206e865123d043c290ec4853b510b2c 444 Pfam PF00367 phosphotransferase system, EIIB 1 28 3.5E-13 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Y11_37851 2206e865123d043c290ec4853b510b2c 444 SUPERFAMILY SSF55604 2 70 1.16E-18 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_37851 2206e865123d043c290ec4853b510b2c 444 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 141 425 2.8E-89 T 13-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 Y11_37851 2206e865123d043c290ec4853b510b2c 444 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 1 436 6.9E-189 T 13-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 Y11_37851 2206e865123d043c290ec4853b510b2c 444 Gene3D G3DSA:3.30.1360.60 1 65 3.7E-23 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_37851 2206e865123d043c290ec4853b510b2c 444 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 7 24 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Y11_10841 f330ae4ed41e2bb26fcd1140b0d99c39 255 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 249 22.581 T 13-10-2018 IPR009627 Uncharacterised protein family UPF0259 Y11_10841 f330ae4ed41e2bb26fcd1140b0d99c39 255 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 247 2.3E-92 T 13-10-2018 IPR009627 Uncharacterised protein family UPF0259 Y11_14081 d551989972a2afc0dba48d3d494dd8d6 113 Pfam PF02561 Flagellar protein FliS 1 106 8.3E-38 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Y11_14081 d551989972a2afc0dba48d3d494dd8d6 113 Gene3D G3DSA:1.20.120.340 1 109 2.8E-40 T 13-10-2018 Y11_14081 d551989972a2afc0dba48d3d494dd8d6 113 PIRSF PIRSF039090 1 113 1.8E-37 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Y11_14081 d551989972a2afc0dba48d3d494dd8d6 113 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 106 4.8E-35 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Y11_14081 d551989972a2afc0dba48d3d494dd8d6 113 SUPERFAMILY SSF101116 1 111 8.5E-38 T 13-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Y11_40461 edb2a4e1cdc1bbf3c9b9df910894a8a4 90 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 1 85 2.3E-13 T 13-10-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like Y11_40461 edb2a4e1cdc1bbf3c9b9df910894a8a4 90 Gene3D G3DSA:1.20.58.1630 1 88 7.2E-16 T 13-10-2018 IPR038432 PulS/OutS-like superfamily Y11_34201 82afcb38fa05adb83f82f375297fd884 106 PIRSF PIRSF028538 1 106 3.8E-43 T 13-10-2018 IPR014949 Protein of unknown function DUF1820 Y11_34201 82afcb38fa05adb83f82f375297fd884 106 Pfam PF08850 Domain of unknown function (DUF1820) 7 99 3.3E-40 T 13-10-2018 IPR014949 Protein of unknown function DUF1820 Y11_27161 3450713e08118dfe0215e86f45b2424e 325 Gene3D G3DSA:3.40.50.720 125 292 8.4E-126 T 13-10-2018 Y11_27161 3450713e08118dfe0215e86f45b2424e 325 Gene3D G3DSA:3.90.180.10 16 323 8.4E-126 T 13-10-2018 Y11_27161 3450713e08118dfe0215e86f45b2424e 325 SUPERFAMILY SSF50129 1 144 1.57E-46 T 13-10-2018 IPR011032 GroES-like superfamily Y11_27161 3450713e08118dfe0215e86f45b2424e 325 SMART SM00829 11 322 3.2E-4 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Y11_27161 3450713e08118dfe0215e86f45b2424e 325 Pfam PF00107 Zinc-binding dehydrogenase 158 269 3.1E-17 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Y11_27161 3450713e08118dfe0215e86f45b2424e 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 9.0E-5 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Y11_27161 3450713e08118dfe0215e86f45b2424e 325 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 324 1.6E-137 T 13-10-2018 IPR014188 Acrylyl-CoA reductase AcuI Y11_27161 3450713e08118dfe0215e86f45b2424e 325 SUPERFAMILY SSF51735 117 288 3.03E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_25331 79940f8c8dec4eabeed667e67f8564eb 128 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 3 123 3.4E-40 T 13-10-2018 IPR020000 Bacteriophage P2, LysB Y11_13321 79940f8c8dec4eabeed667e67f8564eb 128 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 3 123 3.4E-40 T 13-10-2018 IPR020000 Bacteriophage P2, LysB Y11_28821 f73df5482d026ae56c28acdf1896e31b 455 Gene3D G3DSA:2.70.70.10 315 455 1.5E-38 T 13-10-2018 IPR011055 Duplicated hybrid motif Y11_28821 f73df5482d026ae56c28acdf1896e31b 455 Pfam PF01551 Peptidase family M23 356 449 1.3E-25 T 13-10-2018 IPR016047 Peptidase M23 Y11_28821 f73df5482d026ae56c28acdf1896e31b 455 SUPERFAMILY SSF51261 283 453 4.06E-47 T 13-10-2018 IPR011055 Duplicated hybrid motif Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 Gene3D G3DSA:3.40.50.670 391 624 6.2E-95 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 Pfam PF01751 Toprim domain 414 523 2.8E-12 T 13-10-2018 IPR006171 TOPRIM domain Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 47.116 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 626 0.0 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 Pfam PF00204 DNA gyrase B 219 385 1.3E-39 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 3.8E-154 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 3.8E-154 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 3.8E-154 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 3.8E-154 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 3.8E-154 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 3.8E-154 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 3.8E-154 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 3.8E-154 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 3.8E-154 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 3.8E-154 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 3.8E-154 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 3.8E-154 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 3.8E-154 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 3.8E-154 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 SMART SM00387 28 174 1.4E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 SUPERFAMILY SSF54211 218 383 3.79E-46 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 SUPERFAMILY SSF56719 389 622 7.85E-78 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 SUPERFAMILY SSF55874 6 216 1.86E-69 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 621 5.0E-24 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 SMART SM00433 35 625 8.6E-212 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 Gene3D G3DSA:3.30.565.10 4 216 3.6E-76 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR00418 DNA topoisomerase II family signature 110 124 6.8E-59 T 13-10-2018 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR00418 DNA topoisomerase II family signature 67 80 6.8E-59 T 13-10-2018 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 6.8E-59 T 13-10-2018 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 6.8E-59 T 13-10-2018 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR00418 DNA topoisomerase II family signature 32 47 6.8E-59 T 13-10-2018 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 6.8E-59 T 13-10-2018 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 6.8E-59 T 13-10-2018 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR00418 DNA topoisomerase II family signature 561 577 6.8E-59 T 13-10-2018 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 6.8E-59 T 13-10-2018 Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 Gene3D G3DSA:3.30.230.10 217 390 1.0E-58 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y11_24851 5f493a78b48d01faa6de0acd2c41f0bb 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 171 1.7E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_39421 01c5de95fec6f1c9d069512fc98446f5 287 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 1.8E-117 T 13-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Y11_39421 01c5de95fec6f1c9d069512fc98446f5 287 SUPERFAMILY SSF53335 6 283 1.6E-88 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_39421 01c5de95fec6f1c9d069512fc98446f5 287 Pfam PF17284 Spermidine synthase tetramerisation domain 6 57 6.2E-18 T 13-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Y11_39421 01c5de95fec6f1c9d069512fc98446f5 287 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 13-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Y11_39421 01c5de95fec6f1c9d069512fc98446f5 287 Pfam PF01564 Spermine/spermidine synthase domain 60 241 3.2E-67 T 13-10-2018 Y11_39421 01c5de95fec6f1c9d069512fc98446f5 287 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 39.384 T 13-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Y11_39421 01c5de95fec6f1c9d069512fc98446f5 287 Gene3D G3DSA:3.40.50.150 55 286 8.8E-82 T 13-10-2018 Y11_39421 01c5de95fec6f1c9d069512fc98446f5 287 Gene3D G3DSA:2.30.140.10 1 54 1.4E-26 T 13-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Y11_34121 a46081515123fa766e3247f3e8d5ea45 551 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 353 363 - T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_34121 a46081515123fa766e3247f3e8d5ea45 551 SUPERFAMILY SSF51905 10 323 8.89E-46 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_34121 a46081515123fa766e3247f3e8d5ea45 551 Gene3D G3DSA:3.50.50.60 11 367 3.3E-79 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_34121 a46081515123fa766e3247f3e8d5ea45 551 Pfam PF01266 FAD dependent oxidoreductase 11 360 5.6E-56 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Y11_34121 a46081515123fa766e3247f3e8d5ea45 551 Gene3D G3DSA:3.30.9.10 87 319 3.3E-79 T 13-10-2018 Y11_34121 a46081515123fa766e3247f3e8d5ea45 551 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 11 540 2.7E-268 T 13-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 Y11_34121 a46081515123fa766e3247f3e8d5ea45 551 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 15 32 - T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_34121 a46081515123fa766e3247f3e8d5ea45 551 Gene3D G3DSA:1.10.10.1100 421 493 1.8E-17 T 13-10-2018 Y11_34121 a46081515123fa766e3247f3e8d5ea45 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 23 33 7.3E-22 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_34121 a46081515123fa766e3247f3e8d5ea45 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 348 360 7.3E-22 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_34121 a46081515123fa766e3247f3e8d5ea45 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 10 22 7.3E-22 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_34121 a46081515123fa766e3247f3e8d5ea45 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 312 318 7.3E-22 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_34121 a46081515123fa766e3247f3e8d5ea45 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 39 51 7.3E-22 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_34121 a46081515123fa766e3247f3e8d5ea45 551 Pfam PF04324 BFD-like [2Fe-2S] binding domain 433 484 6.7E-10 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Y11_35131 5c0670d664e7aa5b61fd3b8fcd815191 551 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 4 551 0.0 T 13-10-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 Y11_35131 5c0670d664e7aa5b61fd3b8fcd815191 551 Pfam PF00474 Sodium:solute symporter family 64 470 9.4E-128 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Y11_35131 5c0670d664e7aa5b61fd3b8fcd815191 551 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 452 472 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site Y11_35131 5c0670d664e7aa5b61fd3b8fcd815191 551 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 179 204 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site Y11_35131 5c0670d664e7aa5b61fd3b8fcd815191 551 Gene3D G3DSA:1.20.1730.10 53 549 1.7E-62 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily Y11_35131 5c0670d664e7aa5b61fd3b8fcd815191 551 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 2 551 51.08 T 13-10-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 Y11_35131 5c0670d664e7aa5b61fd3b8fcd815191 551 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 64 468 1.3E-60 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Y11_17071 d239d91106eba8319b924e432a809406 596 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 243 254 - T 13-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17071 d239d91106eba8319b924e432a809406 596 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 115 159 8.0E-14 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17071 d239d91106eba8319b924e432a809406 596 SUPERFAMILY SSF143243 26 221 1.09E-44 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17071 d239d91106eba8319b924e432a809406 596 Gene3D G3DSA:1.10.645.20 208 564 5.4E-112 T 13-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17071 d239d91106eba8319b924e432a809406 596 Pfam PF00374 Nickel-dependent hydrogenase 245 313 2.6E-13 T 13-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Y11_17071 d239d91106eba8319b924e432a809406 596 Gene3D G3DSA:3.30.460.80 27 162 1.5E-9 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17071 d239d91106eba8319b924e432a809406 596 SUPERFAMILY SSF56762 220 564 4.84E-108 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17071 d239d91106eba8319b924e432a809406 596 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 322 492 1.3E-36 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17071 d239d91106eba8319b924e432a809406 596 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 499 564 1.2E-10 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17071 d239d91106eba8319b924e432a809406 596 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 52 180 4.7E-23 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_20051 e50ee0b8ced18911cb964c38b9a13adf 110 PIRSF PIRSF004555 3 110 7.3E-39 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Y11_20051 e50ee0b8ced18911cb964c38b9a13adf 110 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 1.5E-35 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Y11_20051 e50ee0b8ced18911cb964c38b9a13adf 110 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 106 2.9E-41 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Y11_20051 e50ee0b8ced18911cb964c38b9a13adf 110 Gene3D G3DSA:3.30.1310.10 1 110 2.0E-47 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Y11_20051 e50ee0b8ced18911cb964c38b9a13adf 110 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 99 22.868 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Y11_20051 e50ee0b8ced18911cb964c38b9a13adf 110 SUPERFAMILY SSF82607 11 104 5.62E-35 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Y11_11171 e0b37acd204b43b6f4c0dbbda0d9da2b 128 Pfam PF00293 NUDIX domain 4 122 7.4E-18 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Y11_11171 e0b37acd204b43b6f4c0dbbda0d9da2b 128 PRINTS PR00502 NUDIX hydrolase family signature 44 59 1.8E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Y11_11171 e0b37acd204b43b6f4c0dbbda0d9da2b 128 PRINTS PR00502 NUDIX hydrolase family signature 30 44 1.8E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Y11_11171 e0b37acd204b43b6f4c0dbbda0d9da2b 128 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Y11_11171 e0b37acd204b43b6f4c0dbbda0d9da2b 128 SUPERFAMILY SSF55811 3 125 6.23E-33 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Y11_11171 e0b37acd204b43b6f4c0dbbda0d9da2b 128 Gene3D G3DSA:3.90.79.10 1 128 9.3E-38 T 13-10-2018 Y11_21301 7433ae119ca1b23b602acc51b821e372 152 Gene3D G3DSA:3.40.50.2020 1 152 2.1E-41 T 13-10-2018 Y11_21301 7433ae119ca1b23b602acc51b821e372 152 Pfam PF00156 Phosphoribosyl transferase domain 10 145 3.7E-17 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Y11_21301 7433ae119ca1b23b602acc51b821e372 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.384 T 13-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 Y11_21301 7433ae119ca1b23b602acc51b821e372 152 SUPERFAMILY SSF53271 4 144 1.97E-30 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Y11_37241 5392564c9cebddd5ccfc74b679b84d71 522 Gene3D G3DSA:3.10.105.10 283 498 8.0E-95 T 13-10-2018 Y11_37241 5392564c9cebddd5ccfc74b679b84d71 522 PIRSF PIRSF002741 6 519 6.4E-62 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Y11_37241 5392564c9cebddd5ccfc74b679b84d71 522 SUPERFAMILY SSF53850 21 517 1.03E-98 T 13-10-2018 Y11_37241 5392564c9cebddd5ccfc74b679b84d71 522 Gene3D G3DSA:3.90.76.10 41 201 8.0E-95 T 13-10-2018 Y11_37241 5392564c9cebddd5ccfc74b679b84d71 522 Gene3D G3DSA:3.40.190.10 202 508 8.0E-95 T 13-10-2018 Y11_37241 5392564c9cebddd5ccfc74b679b84d71 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 439 3.2E-66 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain Y11_31291 28938dd44199e4421da5d5dc5d5d185d 430 SUPERFAMILY SSF118215 9 401 3.4E-122 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Y11_31291 28938dd44199e4421da5d5dc5d5d185d 430 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 13-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site Y11_31291 28938dd44199e4421da5d5dc5d5d185d 430 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 7.1E-30 T 13-10-2018 Y11_31291 28938dd44199e4421da5d5dc5d5d185d 430 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 7.1E-30 T 13-10-2018 Y11_31291 28938dd44199e4421da5d5dc5d5d185d 430 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 7.1E-30 T 13-10-2018 Y11_31291 28938dd44199e4421da5d5dc5d5d185d 430 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 7.1E-30 T 13-10-2018 Y11_31291 28938dd44199e4421da5d5dc5d5d185d 430 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 7.1E-30 T 13-10-2018 Y11_31291 28938dd44199e4421da5d5dc5d5d185d 430 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 7.1E-30 T 13-10-2018 Y11_31291 28938dd44199e4421da5d5dc5d5d185d 430 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 38.884 T 13-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 Y11_31291 28938dd44199e4421da5d5dc5d5d185d 430 Gene3D G3DSA:1.10.3860.10 1 418 3.3E-120 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Y11_31291 28938dd44199e4421da5d5dc5d5d185d 430 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 8.6E-112 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Y11_31291 28938dd44199e4421da5d5dc5d5d185d 430 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 13-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site Y11_05461 49ca677891cf51c902eb83d47613d1db 193 Pfam PF13036 Peptidoglycan-synthase activator LpoB 53 190 8.3E-35 T 13-10-2018 IPR014094 Penicillin-binding protein activator LpoB Y11_05461 49ca677891cf51c902eb83d47613d1db 193 Gene3D G3DSA:3.40.50.10610 57 193 4.6E-53 T 13-10-2018 Y11_05461 49ca677891cf51c902eb83d47613d1db 193 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 2 192 4.5E-55 T 13-10-2018 IPR014094 Penicillin-binding protein activator LpoB Y11_05461 49ca677891cf51c902eb83d47613d1db 193 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 1 192 36.234 T 13-10-2018 IPR014094 Penicillin-binding protein activator LpoB Y11_33211 e6a23e8c866f0119ceed1c3a0f67a393 429 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 69.51 T 13-10-2018 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 Y11_33211 e6a23e8c866f0119ceed1c3a0f67a393 429 Pfam PF01029 NusB family 6 127 2.8E-24 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Y11_33211 e6a23e8c866f0119ceed1c3a0f67a393 429 Gene3D G3DSA:3.40.50.150 231 429 1.4E-71 T 13-10-2018 Y11_33211 e6a23e8c866f0119ceed1c3a0f67a393 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 429 8.7E-172 T 13-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 Y11_33211 e6a23e8c866f0119ceed1c3a0f67a393 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 13-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 Y11_33211 e6a23e8c866f0119ceed1c3a0f67a393 429 Gene3D G3DSA:1.10.940.10 1 145 9.3E-48 T 13-10-2018 IPR035926 NusB-like superfamily Y11_33211 e6a23e8c866f0119ceed1c3a0f67a393 429 Gene3D G3DSA:1.10.287.730 146 172 4.3E-15 T 13-10-2018 Y11_33211 e6a23e8c866f0119ceed1c3a0f67a393 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 5.4E-31 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Y11_33211 e6a23e8c866f0119ceed1c3a0f67a393 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 5.4E-31 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Y11_33211 e6a23e8c866f0119ceed1c3a0f67a393 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 5.4E-31 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Y11_33211 e6a23e8c866f0119ceed1c3a0f67a393 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 5.4E-31 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Y11_33211 e6a23e8c866f0119ceed1c3a0f67a393 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 5.4E-31 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Y11_33211 e6a23e8c866f0119ceed1c3a0f67a393 429 SUPERFAMILY SSF53335 142 429 2.56E-77 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_33211 e6a23e8c866f0119ceed1c3a0f67a393 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 426 7.2E-76 T 13-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Y11_33211 e6a23e8c866f0119ceed1c3a0f67a393 429 SUPERFAMILY SSF48013 6 149 9.32E-36 T 13-10-2018 IPR035926 NusB-like superfamily Y11_33211 e6a23e8c866f0119ceed1c3a0f67a393 429 Gene3D G3DSA:3.30.70.1170 173 230 2.2E-25 T 13-10-2018 Y11_16481 aea31acefa61b00fca5e5bdddaf88beb 349 Gene3D G3DSA:3.40.50.300 262 347 4.2E-9 T 13-10-2018 Y11_16481 aea31acefa61b00fca5e5bdddaf88beb 349 SUPERFAMILY SSF52540 8 233 1.55E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_16481 aea31acefa61b00fca5e5bdddaf88beb 349 SUPERFAMILY SSF52540 270 323 1.95E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_16481 aea31acefa61b00fca5e5bdddaf88beb 349 Pfam PF00005 ABC transporter 24 175 4.1E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_16481 aea31acefa61b00fca5e5bdddaf88beb 349 Pfam PF00005 ABC transporter 275 326 1.1E-6 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_16481 aea31acefa61b00fca5e5bdddaf88beb 349 Gene3D G3DSA:3.40.50.300 2 248 4.3E-54 T 13-10-2018 Y11_16481 aea31acefa61b00fca5e5bdddaf88beb 349 SMART SM00382 33 223 3.5E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_23541 1d25d99af0e28b8663badd90bf1e4e2f 410 Pfam PF07514 Putative helicase 35 246 8.4E-43 T 13-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative Y11_23541 1d25d99af0e28b8663badd90bf1e4e2f 410 Gene3D G3DSA:1.10.10.10 291 357 2.4E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_23541 1d25d99af0e28b8663badd90bf1e4e2f 410 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 34 249 5.2E-84 T 13-10-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class Y11_23541 1d25d99af0e28b8663badd90bf1e4e2f 410 Gene3D G3DSA:2.40.10.200 307 403 2.4E-25 T 13-10-2018 Y11_23541 1d25d99af0e28b8663badd90bf1e4e2f 410 SUPERFAMILY SSF46785 288 408 5.17E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_23541 1d25d99af0e28b8663badd90bf1e4e2f 410 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 291 396 7.9E-21 T 13-10-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal Y11_23541 1d25d99af0e28b8663badd90bf1e4e2f 410 Gene3D G3DSA:1.10.3210.40 38 259 3.5E-17 T 13-10-2018 Y11_37081 a3bfe164b70c3b8a9b28d2ff3df908d0 288 PIRSF PIRSF011468 1 288 2.1E-163 T 13-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Y11_37081 a3bfe164b70c3b8a9b28d2ff3df908d0 288 Pfam PF06007 Phosphonate metabolism protein PhnJ 7 278 4.7E-145 T 13-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Y11_p0691 32333ad3d7024661422670168da8b03a 271 SMART SM00342 180 263 1.0E-30 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_p0691 32333ad3d7024661422670168da8b03a 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 232 247 5.0E-8 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_p0691 32333ad3d7024661422670168da8b03a 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 263 5.0E-8 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_p0691 32333ad3d7024661422670168da8b03a 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 217 259 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Y11_p0691 32333ad3d7024661422670168da8b03a 271 SUPERFAMILY SSF46689 216 263 1.22E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_p0691 32333ad3d7024661422670168da8b03a 271 SUPERFAMILY SSF51215 21 145 9.68E-7 T 13-10-2018 IPR037923 Transcription regulator HTH-like Y11_p0691 32333ad3d7024661422670168da8b03a 271 Gene3D G3DSA:1.10.10.60 159 268 2.2E-27 T 13-10-2018 Y11_p0691 32333ad3d7024661422670168da8b03a 271 Pfam PF12833 Helix-turn-helix domain 187 263 2.9E-23 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_39911 72160898cfefd4b90eb81b0a069a10ab 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 40.288 T 13-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Y11_39911 72160898cfefd4b90eb81b0a069a10ab 128 Gene3D G3DSA:2.40.50.100 2 128 8.0E-51 T 13-10-2018 Y11_39911 72160898cfefd4b90eb81b0a069a10ab 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Y11_39911 72160898cfefd4b90eb81b0a069a10ab 128 Pfam PF01597 Glycine cleavage H-protein 8 127 1.7E-46 T 13-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Y11_39911 72160898cfefd4b90eb81b0a069a10ab 128 SUPERFAMILY SSF51230 4 127 5.13E-44 T 13-10-2018 IPR011053 Single hybrid motif Y11_39911 72160898cfefd4b90eb81b0a069a10ab 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 5.7E-55 T 13-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Y11_39011 02b7c0e64a275e2ce51a74c617c11e80 454 Gene3D G3DSA:3.90.190.20 314 454 2.0E-46 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Y11_39011 02b7c0e64a275e2ce51a74c617c11e80 454 Pfam PF01225 Mur ligase family, catalytic domain 25 93 2.2E-13 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Y11_39011 02b7c0e64a275e2ce51a74c617c11e80 454 SUPERFAMILY SSF53244 315 448 9.39E-37 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Y11_39011 02b7c0e64a275e2ce51a74c617c11e80 454 Gene3D G3DSA:3.40.1390.10 1 81 5.0E-27 T 13-10-2018 Y11_39011 02b7c0e64a275e2ce51a74c617c11e80 454 Pfam PF08245 Mur ligase middle domain 107 295 2.4E-47 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Y11_39011 02b7c0e64a275e2ce51a74c617c11e80 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 34.642 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_39011 02b7c0e64a275e2ce51a74c617c11e80 454 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 448 6.1E-141 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_39011 02b7c0e64a275e2ce51a74c617c11e80 454 SUPERFAMILY SSF53623 101 312 5.23E-59 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Y11_39011 02b7c0e64a275e2ce51a74c617c11e80 454 SUPERFAMILY SSF63418 1 98 1.57E-28 T 13-10-2018 IPR035911 MurE/MurF, N-terminal Y11_39011 02b7c0e64a275e2ce51a74c617c11e80 454 Gene3D G3DSA:3.40.1190.10 82 313 6.9E-86 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Y11_39011 02b7c0e64a275e2ce51a74c617c11e80 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 393 1.6E-14 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Y11_31961 8871be338e3289e258c83f8cdcccf424 801 Gene3D G3DSA:3.40.50.2000 457 784 0.0 T 13-10-2018 Y11_31961 8871be338e3289e258c83f8cdcccf424 801 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 12 798 0.0 T 13-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Y11_31961 8871be338e3289e258c83f8cdcccf424 801 Gene3D G3DSA:3.40.50.2000 61 798 0.0 T 13-10-2018 Y11_31961 8871be338e3289e258c83f8cdcccf424 801 SUPERFAMILY SSF53756 8 799 7.85E-293 T 13-10-2018 Y11_31961 8871be338e3289e258c83f8cdcccf424 801 PIRSF PIRSF000460 2 801 1.2E-206 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Y11_31961 8871be338e3289e258c83f8cdcccf424 801 Pfam PF00343 Carbohydrate phosphorylase 94 798 0.0 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Y11_31961 8871be338e3289e258c83f8cdcccf424 801 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 643 655 - T 13-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Y11_14691 192f9f03fcdd62183d9e06ff2947583b 116 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 94 2.0E-45 T 13-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 Y11_14691 192f9f03fcdd62183d9e06ff2947583b 116 SUPERFAMILY SSF63592 1 98 4.84E-39 T 13-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily Y11_14691 192f9f03fcdd62183d9e06ff2947583b 116 Gene3D G3DSA:1.10.4000.10 1 116 3.5E-48 T 13-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily Y11_14691 192f9f03fcdd62183d9e06ff2947583b 116 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 28.706 T 13-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 Y11_14691 192f9f03fcdd62183d9e06ff2947583b 116 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 5.1E-40 T 13-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 Y11_28741 087bb587c8c601c08d5f96bc2be901fc 386 PIRSF PIRSF000409 21 382 3.0E-142 T 13-10-2018 IPR016221 Bifunctional regulatory protein Ada Y11_28741 087bb587c8c601c08d5f96bc2be901fc 386 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 344 350 - T 13-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Y11_28741 087bb587c8c601c08d5f96bc2be901fc 386 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 217 275 9.6E-5 T 13-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Y11_28741 087bb587c8c601c08d5f96bc2be901fc 386 Gene3D G3DSA:1.10.10.10 293 378 7.4E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_28741 087bb587c8c601c08d5f96bc2be901fc 386 SUPERFAMILY SSF46767 293 374 5.36E-30 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Y11_28741 087bb587c8c601c08d5f96bc2be901fc 386 Gene3D G3DSA:1.10.10.60 104 170 7.9E-23 T 13-10-2018 Y11_28741 087bb587c8c601c08d5f96bc2be901fc 386 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 295 374 7.5E-32 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Y11_28741 087bb587c8c601c08d5f96bc2be901fc 386 SMART SM00342 124 206 1.7E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_28741 087bb587c8c601c08d5f96bc2be901fc 386 Gene3D G3DSA:3.40.10.10 29 100 2.3E-30 T 13-10-2018 IPR035451 Ada-like domain superfamily Y11_28741 087bb587c8c601c08d5f96bc2be901fc 386 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 294 373 3.3E-35 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Y11_28741 087bb587c8c601c08d5f96bc2be901fc 386 SUPERFAMILY SSF46689 109 156 1.11E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_28741 087bb587c8c601c08d5f96bc2be901fc 386 Pfam PF02805 Metal binding domain of Ada 36 98 4.9E-31 T 13-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 Y11_28741 087bb587c8c601c08d5f96bc2be901fc 386 Gene3D G3DSA:3.30.160.70 200 292 7.8E-32 T 13-10-2018 Y11_28741 087bb587c8c601c08d5f96bc2be901fc 386 SUPERFAMILY SSF57884 33 116 1.7E-32 T 13-10-2018 IPR035451 Ada-like domain superfamily Y11_28741 087bb587c8c601c08d5f96bc2be901fc 386 SUPERFAMILY SSF53155 214 292 6.87E-20 T 13-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Y11_28741 087bb587c8c601c08d5f96bc2be901fc 386 Pfam PF12833 Helix-turn-helix domain 130 207 7.6E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_12051 85f5a717dbb4aac60f924f527f6250d9 242 SMART SM00257 40 84 2.0E-10 T 13-10-2018 IPR018392 LysM domain Y11_12051 85f5a717dbb4aac60f924f527f6250d9 242 Gene3D G3DSA:3.10.350.10 33 98 1.5E-13 T 13-10-2018 IPR036779 LysM domain superfamily Y11_12051 85f5a717dbb4aac60f924f527f6250d9 242 Pfam PF01551 Peptidase family M23 136 229 1.7E-30 T 13-10-2018 IPR016047 Peptidase M23 Y11_12051 85f5a717dbb4aac60f924f527f6250d9 242 SUPERFAMILY SSF51261 41 233 2.46E-49 T 13-10-2018 IPR011055 Duplicated hybrid motif Y11_12051 85f5a717dbb4aac60f924f527f6250d9 242 Gene3D G3DSA:2.70.70.10 100 234 8.5E-37 T 13-10-2018 IPR011055 Duplicated hybrid motif Y11_12051 85f5a717dbb4aac60f924f527f6250d9 242 Pfam PF01476 LysM domain 41 83 5.5E-12 T 13-10-2018 IPR018392 LysM domain Y11_11821 642370fbf9139805d1bc61039163ae8b 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 334 7.0E-42 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Y11_11821 642370fbf9139805d1bc61039163ae8b 334 Gene3D G3DSA:3.40.50.300 23 184 1.3E-39 T 13-10-2018 Y11_11821 642370fbf9139805d1bc61039163ae8b 334 Gene3D G3DSA:1.10.8.60 185 258 2.0E-29 T 13-10-2018 Y11_11821 642370fbf9139805d1bc61039163ae8b 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 2.4E-117 T 13-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Y11_11821 642370fbf9139805d1bc61039163ae8b 334 SUPERFAMILY SSF52540 23 255 7.0E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_11821 642370fbf9139805d1bc61039163ae8b 334 Gene3D G3DSA:1.10.10.10 260 334 1.1E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_11821 642370fbf9139805d1bc61039163ae8b 334 SUPERFAMILY SSF46785 260 331 3.27E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_11821 642370fbf9139805d1bc61039163ae8b 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 1.2E-33 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Y11_11821 642370fbf9139805d1bc61039163ae8b 334 SMART SM00382 54 181 6.4E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_11821 642370fbf9139805d1bc61039163ae8b 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 185.374 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Y11_11821 642370fbf9139805d1bc61039163ae8b 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 5.5E-149 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Y11_07361 11fd355401787dd38e9def13e6a2edab 415 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 7 405 5.5E-173 T 13-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type Y11_07361 11fd355401787dd38e9def13e6a2edab 415 Pfam PF04403 Paraquat-inducible protein A 53 204 1.2E-38 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like Y11_07361 11fd355401787dd38e9def13e6a2edab 415 Pfam PF04403 Paraquat-inducible protein A 250 405 2.4E-46 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like Y11_19981 12f227cfa1a545ce96740ad6f2dd150c 318 SUPERFAMILY SSF53448 7 218 1.45E-40 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_19981 12f227cfa1a545ce96740ad6f2dd150c 318 Pfam PF00535 Glycosyl transferase family 2 8 104 1.7E-25 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Y11_19981 12f227cfa1a545ce96740ad6f2dd150c 318 Gene3D G3DSA:3.90.550.10 1 247 3.4E-39 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_01591 8545113c3a89d77e67014482e4518272 100 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 2.3E-34 T 13-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 Y11_01591 8545113c3a89d77e67014482e4518272 100 PIRSF PIRSF000699 1 100 6.2E-36 T 13-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 Y11_01591 8545113c3a89d77e67014482e4518272 100 SUPERFAMILY SSF46973 1 100 6.93E-35 T 13-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 Y11_01591 8545113c3a89d77e67014482e4518272 100 Gene3D G3DSA:1.20.58.280 2 100 7.4E-37 T 13-10-2018 Y11_05001 9c26cb5588898858d798af282ef11a20 277 Gene3D G3DSA:1.20.1250.20 107 276 1.1E-23 T 13-10-2018 Y11_05001 9c26cb5588898858d798af282ef11a20 277 Pfam PF07690 Major Facilitator Superfamily 117 274 3.2E-17 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_05001 9c26cb5588898858d798af282ef11a20 277 SUPERFAMILY SSF103473 3 274 1.66E-40 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_05001 9c26cb5588898858d798af282ef11a20 277 Gene3D G3DSA:1.20.1250.20 1 93 2.1E-14 T 13-10-2018 Y11_35791 9fb4dd49c6c71f91354776dfb3e321b2 764 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 15 764 0.0 T 13-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Y11_35791 9fb4dd49c6c71f91354776dfb3e321b2 764 Gene3D G3DSA:3.20.70.20 7 764 0.0 T 13-10-2018 Y11_35791 9fb4dd49c6c71f91354776dfb3e321b2 764 SUPERFAMILY SSF51998 9 762 2.52E-275 T 13-10-2018 Y11_35791 9fb4dd49c6c71f91354776dfb3e321b2 764 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 13-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Y11_35791 9fb4dd49c6c71f91354776dfb3e321b2 764 PIRSF PIRSF000379 12 764 0.0 T 13-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Y11_35791 9fb4dd49c6c71f91354776dfb3e321b2 764 Pfam PF01228 Glycine radical 634 745 2.0E-39 T 13-10-2018 IPR001150 Glycine radical domain GO:0003824 Y11_35791 9fb4dd49c6c71f91354776dfb3e321b2 764 Pfam PF02901 Pyruvate formate lyase-like 26 618 3.5E-191 T 13-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 Y11_01851 069ead8f8713106d3dd6e93a320a83f7 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.73 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Y11_01851 069ead8f8713106d3dd6e93a320a83f7 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 6.5E-162 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Y11_01851 069ead8f8713106d3dd6e93a320a83f7 505 SUPERFAMILY SSF56235 2 259 5.83E-76 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_01851 069ead8f8713106d3dd6e93a320a83f7 505 Pfam PF00156 Phosphoribosyl transferase domain 292 394 8.3E-8 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Y11_01851 069ead8f8713106d3dd6e93a320a83f7 505 Gene3D G3DSA:3.40.50.2020 279 443 3.3E-161 T 13-10-2018 Y11_01851 069ead8f8713106d3dd6e93a320a83f7 505 SUPERFAMILY SSF53271 252 485 1.08E-72 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Y11_01851 069ead8f8713106d3dd6e93a320a83f7 505 PIRSF PIRSF000485 1 483 8.7E-170 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Y11_01851 069ead8f8713106d3dd6e93a320a83f7 505 Pfam PF13522 Glutamine amidotransferase domain 65 210 1.7E-15 T 13-10-2018 Y11_01851 069ead8f8713106d3dd6e93a320a83f7 505 Gene3D G3DSA:3.60.20.10 2 414 3.3E-161 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_08241 798c15038cb0b5f994429487c798982c 355 Gene3D G3DSA:2.40.440.10 23 306 4.4E-87 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Y11_08241 798c15038cb0b5f994429487c798982c 355 SUPERFAMILY SSF141523 98 235 4.58E-30 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Y11_08241 798c15038cb0b5f994429487c798982c 355 Pfam PF03734 L,D-transpeptidase catalytic domain 100 235 1.9E-20 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Y11_40251 00b7673cc5a8da6646968a42bbe3880f 317 SUPERFAMILY SSF49493 129 225 6.8E-17 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Y11_40251 00b7673cc5a8da6646968a42bbe3880f 317 SUPERFAMILY SSF46565 1 93 1.26E-28 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Y11_40251 00b7673cc5a8da6646968a42bbe3880f 317 PRINTS PR00625 DnaJ domain signature 7 25 1.3E-20 T 13-10-2018 IPR001623 DnaJ domain Y11_40251 00b7673cc5a8da6646968a42bbe3880f 317 PRINTS PR00625 DnaJ domain signature 41 61 1.3E-20 T 13-10-2018 IPR001623 DnaJ domain Y11_40251 00b7673cc5a8da6646968a42bbe3880f 317 PRINTS PR00625 DnaJ domain signature 61 80 1.3E-20 T 13-10-2018 IPR001623 DnaJ domain Y11_40251 00b7673cc5a8da6646968a42bbe3880f 317 PRINTS PR00625 DnaJ domain signature 25 40 1.3E-20 T 13-10-2018 IPR001623 DnaJ domain Y11_40251 00b7673cc5a8da6646968a42bbe3880f 317 Gene3D G3DSA:1.10.287.110 2 124 1.1E-32 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Y11_40251 00b7673cc5a8da6646968a42bbe3880f 317 Gene3D G3DSA:2.60.260.20 129 213 5.3E-20 T 13-10-2018 Y11_40251 00b7673cc5a8da6646968a42bbe3880f 317 SUPERFAMILY SSF49493 218 301 6.41E-18 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Y11_40251 00b7673cc5a8da6646968a42bbe3880f 317 Gene3D G3DSA:1.20.5.460 290 317 1.8E-9 T 13-10-2018 Y11_40251 00b7673cc5a8da6646968a42bbe3880f 317 Pfam PF00226 DnaJ domain 5 66 4.2E-24 T 13-10-2018 IPR001623 DnaJ domain Y11_40251 00b7673cc5a8da6646968a42bbe3880f 317 Pfam PF01556 DnaJ C terminal domain 134 290 1.5E-33 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal Y11_40251 00b7673cc5a8da6646968a42bbe3880f 317 Gene3D G3DSA:2.60.260.20 214 289 1.2E-29 T 13-10-2018 Y11_40251 00b7673cc5a8da6646968a42bbe3880f 317 SMART SM00271 4 61 5.5E-27 T 13-10-2018 IPR001623 DnaJ domain Y11_40251 00b7673cc5a8da6646968a42bbe3880f 317 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 13-10-2018 IPR018253 DnaJ domain, conserved site Y11_22651 5e96998223c830e23143ca883de41426 846 Gene3D G3DSA:2.60.40.2070 758 835 4.7E-29 T 13-10-2018 Y11_22651 5e96998223c830e23143ca883de41426 846 Gene3D G3DSA:2.60.40.3110 274 362 5.0E-28 T 13-10-2018 Y11_22651 5e96998223c830e23143ca883de41426 846 Pfam PF00577 Outer membrane usher protein 201 749 7.7E-188 T 13-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 Y11_22651 5e96998223c830e23143ca883de41426 846 Gene3D G3DSA:2.60.40.2610 664 754 5.3E-15 T 13-10-2018 Y11_22651 5e96998223c830e23143ca883de41426 846 Gene3D G3DSA:3.10.20.410 37 160 2.9E-24 T 13-10-2018 Y11_22651 5e96998223c830e23143ca883de41426 846 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 316 326 - T 13-10-2018 IPR018030 Fimbrial membrane usher, conserved site Y11_22651 5e96998223c830e23143ca883de41426 846 SUPERFAMILY SSF141729 37 158 4.58E-31 T 13-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 Y11_22651 5e96998223c830e23143ca883de41426 846 Pfam PF13954 PapC N-terminal domain 39 182 9.0E-39 T 13-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 Y11_22651 5e96998223c830e23143ca883de41426 846 Pfam PF13953 PapC C-terminal domain 760 816 3.6E-15 T 13-10-2018 IPR025949 PapC-like, C-terminal domain Y11_27621 272690f55b6a6421a35be36ce0c684ad 69 PIRSF PIRSF039008 1 66 9.5E-33 T 13-10-2018 IPR026042 Stress response protein YjbJ Y11_27621 272690f55b6a6421a35be36ce0c684ad 69 Gene3D G3DSA:1.10.1470.10 1 69 1.8E-35 T 13-10-2018 IPR036629 YjbJ superfamily Y11_27621 272690f55b6a6421a35be36ce0c684ad 69 Pfam PF05532 CsbD-like 4 56 7.8E-23 T 13-10-2018 IPR008462 CsbD-like domain Y11_27621 272690f55b6a6421a35be36ce0c684ad 69 SUPERFAMILY SSF69047 1 69 9.42E-28 T 13-10-2018 IPR036629 YjbJ superfamily Y11_01131 2b65eeab4d33d87fa4031bb91175b7db 354 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 110 350 6.2E-72 T 13-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria Y11_01131 2b65eeab4d33d87fa4031bb91175b7db 354 Pfam PF02405 Permease MlaE 138 347 4.0E-67 T 13-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Y11_40041 883d43b8ff3990d9285e1d67e49c7563 230 SUPERFAMILY SSF55874 66 227 3.67E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_40041 883d43b8ff3990d9285e1d67e49c7563 230 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 120 228 2.0E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_40041 883d43b8ff3990d9285e1d67e49c7563 230 Gene3D G3DSA:1.10.287.130 8 69 4.1E-12 T 13-10-2018 Y11_40041 883d43b8ff3990d9285e1d67e49c7563 230 SMART SM00388 10 75 1.1E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_40041 883d43b8ff3990d9285e1d67e49c7563 230 Gene3D G3DSA:3.30.565.10 70 228 1.2E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_40041 883d43b8ff3990d9285e1d67e49c7563 230 Pfam PF00512 His Kinase A (phospho-acceptor) domain 13 74 1.7E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_40041 883d43b8ff3990d9285e1d67e49c7563 230 SUPERFAMILY SSF47384 10 74 9.22E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_40041 883d43b8ff3990d9285e1d67e49c7563 230 SMART SM00387 119 229 2.3E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_40041 883d43b8ff3990d9285e1d67e49c7563 230 PRINTS PR00344 Bacterial sensor protein C-terminal signature 189 207 3.9E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_40041 883d43b8ff3990d9285e1d67e49c7563 230 PRINTS PR00344 Bacterial sensor protein C-terminal signature 156 170 3.9E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_40041 883d43b8ff3990d9285e1d67e49c7563 230 PRINTS PR00344 Bacterial sensor protein C-terminal signature 174 184 3.9E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_19231 94c24c0752d265a66dab57df47c50f4d 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 4.1E-46 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Y11_19231 94c24c0752d265a66dab57df47c50f4d 156 PIRSF PIRSF004505 1 155 1.0E-39 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Y11_19231 94c24c0752d265a66dab57df47c50f4d 156 Gene3D G3DSA:3.40.1280.10 1 156 3.3E-51 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Y11_19231 94c24c0752d265a66dab57df47c50f4d 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.535 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Y11_19231 94c24c0752d265a66dab57df47c50f4d 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 3.2E-82 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Y11_19231 94c24c0752d265a66dab57df47c50f4d 156 SUPERFAMILY SSF75217 2 154 1.88E-48 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Y11_25971 c3f958bf54334d681101adf8cc05bc8f 328 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 1.0E-23 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Y11_25971 c3f958bf54334d681101adf8cc05bc8f 328 Gene3D G3DSA:1.20.1050.10 174 284 4.7E-136 T 13-10-2018 Y11_25971 c3f958bf54334d681101adf8cc05bc8f 328 PIRSF PIRSF015753 5 324 9.2E-132 T 13-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 Y11_25971 c3f958bf54334d681101adf8cc05bc8f 328 SUPERFAMILY SSF47616 176 324 4.73E-35 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Y11_25971 c3f958bf54334d681101adf8cc05bc8f 328 SUPERFAMILY SSF52833 42 163 4.19E-15 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_25971 c3f958bf54334d681101adf8cc05bc8f 328 Gene3D G3DSA:3.40.30.130 21 317 4.7E-136 T 13-10-2018 Y11_25971 c3f958bf54334d681101adf8cc05bc8f 328 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 256 6.4E-12 T 13-10-2018 Y11_30301 4acffb7339c50d61d3289fea89f0a8d8 154 Gene3D G3DSA:3.40.630.30 1 151 4.0E-31 T 13-10-2018 Y11_30301 4acffb7339c50d61d3289fea89f0a8d8 154 SUPERFAMILY SSF55729 1 140 6.1E-24 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_30301 4acffb7339c50d61d3289fea89f0a8d8 154 Pfam PF13673 Acetyltransferase (GNAT) domain 63 150 6.0E-14 T 13-10-2018 IPR000182 GNAT domain Y11_17321 ff1833b19f97461c0d69bc288a4f6d26 411 Pfam PF00994 Probable molybdopterin binding domain 183 319 2.3E-26 T 13-10-2018 IPR001453 MoaB/Mog domain Y11_17321 ff1833b19f97461c0d69bc288a4f6d26 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 170 5.8E-44 T 13-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Y11_17321 ff1833b19f97461c0d69bc288a4f6d26 411 Gene3D G3DSA:2.170.190.11 53 144 6.1E-143 T 13-10-2018 Y11_17321 ff1833b19f97461c0d69bc288a4f6d26 411 Gene3D G3DSA:3.40.980.10 178 330 6.1E-143 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Y11_17321 ff1833b19f97461c0d69bc288a4f6d26 411 SMART SM00852 183 320 3.5E-43 T 13-10-2018 IPR001453 MoaB/Mog domain Y11_17321 ff1833b19f97461c0d69bc288a4f6d26 411 SUPERFAMILY SSF63882 9 178 5.36E-54 T 13-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Y11_17321 ff1833b19f97461c0d69bc288a4f6d26 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 289 - T 13-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Y11_17321 ff1833b19f97461c0d69bc288a4f6d26 411 Gene3D G3DSA:2.40.340.10 331 401 6.1E-143 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Y11_17321 ff1833b19f97461c0d69bc288a4f6d26 411 Pfam PF03454 MoeA C-terminal region (domain IV) 334 406 9.0E-18 T 13-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Y11_17321 ff1833b19f97461c0d69bc288a4f6d26 411 SUPERFAMILY SSF63867 330 410 1.28E-22 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Y11_17321 ff1833b19f97461c0d69bc288a4f6d26 411 SUPERFAMILY SSF53218 180 325 6.15E-43 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Y11_17321 ff1833b19f97461c0d69bc288a4f6d26 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 316 1.0E-32 T 13-10-2018 IPR001453 MoaB/Mog domain Y11_17321 ff1833b19f97461c0d69bc288a4f6d26 411 Gene3D G3DSA:3.90.105.10 29 177 6.1E-143 T 13-10-2018 Y11_22551 240e80fc2156d590fbf4dda23aabd7e3 658 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_22551 240e80fc2156d590fbf4dda23aabd7e3 658 SMART SM00382 45 232 8.9E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_22551 240e80fc2156d590fbf4dda23aabd7e3 658 Pfam PF12704 MacB-like periplasmic core domain 285 501 3.8E-33 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Y11_22551 240e80fc2156d590fbf4dda23aabd7e3 658 Pfam PF00005 ABC transporter 36 184 1.3E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_22551 240e80fc2156d590fbf4dda23aabd7e3 658 Pfam PF02687 FtsX-like permease family 564 651 1.8E-10 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Y11_22551 240e80fc2156d590fbf4dda23aabd7e3 658 Gene3D G3DSA:3.40.50.300 14 264 9.1E-65 T 13-10-2018 Y11_22551 240e80fc2156d590fbf4dda23aabd7e3 658 SUPERFAMILY SSF52540 16 241 1.61E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_32911 6217cbf14a2732c102ed6fdcb7193770 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.334 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Y11_32911 6217cbf14a2732c102ed6fdcb7193770 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 13-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32911 6217cbf14a2732c102ed6fdcb7193770 274 Gene3D G3DSA:4.10.950.10 196 273 5.2E-37 T 13-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32911 6217cbf14a2732c102ed6fdcb7193770 274 SUPERFAMILY SSF50249 2 125 1.1E-50 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_32911 6217cbf14a2732c102ed6fdcb7193770 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.9E-34 T 13-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32911 6217cbf14a2732c102ed6fdcb7193770 274 SMART SM01382 124 251 4.1E-90 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Y11_32911 6217cbf14a2732c102ed6fdcb7193770 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 1.1E-131 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Y11_32911 6217cbf14a2732c102ed6fdcb7193770 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 3.0E-55 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Y11_32911 6217cbf14a2732c102ed6fdcb7193770 274 Gene3D G3DSA:2.40.50.140 1 114 4.6E-51 T 13-10-2018 Y11_32911 6217cbf14a2732c102ed6fdcb7193770 274 PIRSF PIRSF002158 12 274 3.0E-101 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32911 6217cbf14a2732c102ed6fdcb7193770 274 Gene3D G3DSA:2.30.30.30 115 195 4.3E-33 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Y11_32911 6217cbf14a2732c102ed6fdcb7193770 274 SMART SM01383 42 118 3.6E-48 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32911 6217cbf14a2732c102ed6fdcb7193770 274 SUPERFAMILY SSF50104 127 269 1.08E-59 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Y11_41631 99ee23ac40fc199b6ae0e2e14865b43c 238 SUPERFAMILY SSF53474 2 201 8.32E-11 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_41631 99ee23ac40fc199b6ae0e2e14865b43c 238 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 42 158 1.8E-5 T 13-10-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 Y11_03121 207fdb22524747661a4e572f875096a5 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 7.7E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_03121 207fdb22524747661a4e572f875096a5 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 7.7E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_03121 207fdb22524747661a4e572f875096a5 247 Pfam PF07729 FCD domain 90 216 9.8E-22 T 13-10-2018 IPR011711 GntR, C-terminal Y11_03121 207fdb22524747661a4e572f875096a5 247 Gene3D G3DSA:1.20.120.530 80 227 4.0E-23 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Y11_03121 207fdb22524747661a4e572f875096a5 247 Gene3D G3DSA:1.10.10.10 1 70 1.6E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_03121 207fdb22524747661a4e572f875096a5 247 SMART SM00345 7 66 2.8E-24 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_03121 207fdb22524747661a4e572f875096a5 247 SUPERFAMILY SSF46785 2 70 6.81E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_03121 207fdb22524747661a4e572f875096a5 247 SMART SM00895 90 217 7.5E-22 T 13-10-2018 IPR011711 GntR, C-terminal Y11_03121 207fdb22524747661a4e572f875096a5 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 2.2E-23 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_03121 207fdb22524747661a4e572f875096a5 247 SUPERFAMILY SSF48008 88 224 5.49E-26 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Y11_40271 a7ebe0b1bd7be82ab31baf6e60b12c6b 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 181 7.2E-5 T 13-10-2018 Y11_40271 a7ebe0b1bd7be82ab31baf6e60b12c6b 249 Gene3D G3DSA:3.40.50.720 1 248 3.8E-75 T 13-10-2018 Y11_40271 a7ebe0b1bd7be82ab31baf6e60b12c6b 249 SUPERFAMILY SSF51735 5 247 1.38E-73 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_40271 a7ebe0b1bd7be82ab31baf6e60b12c6b 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 247 2.6E-58 T 13-10-2018 Y11_40271 a7ebe0b1bd7be82ab31baf6e60b12c6b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.5E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_40271 a7ebe0b1bd7be82ab31baf6e60b12c6b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 8.5E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_40271 a7ebe0b1bd7be82ab31baf6e60b12c6b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 8.5E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_40271 a7ebe0b1bd7be82ab31baf6e60b12c6b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.5E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_40271 a7ebe0b1bd7be82ab31baf6e60b12c6b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 8.5E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_40271 a7ebe0b1bd7be82ab31baf6e60b12c6b 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Y11_12321 19f76e0fb4e9ce13cf300e57f9a3807b 593 SUPERFAMILY SSF158472 173 221 5.1E-8 T 13-10-2018 Y11_12321 19f76e0fb4e9ce13cf300e57f9a3807b 593 PIRSF PIRSF003167 1 593 1.0E-196 T 13-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 Y11_12321 19f76e0fb4e9ce13cf300e57f9a3807b 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 500 585 1.1E-6 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_12321 19f76e0fb4e9ce13cf300e57f9a3807b 593 Gene3D G3DSA:1.10.287.130 171 266 6.1E-7 T 13-10-2018 Y11_12321 19f76e0fb4e9ce13cf300e57f9a3807b 593 SMART SM00304 173 226 2.5E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_12321 19f76e0fb4e9ce13cf300e57f9a3807b 593 Gene3D G3DSA:1.20.120.960 39 145 1.3E-39 T 13-10-2018 Y11_12321 19f76e0fb4e9ce13cf300e57f9a3807b 593 Pfam PF00672 HAMP domain 173 221 2.3E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_12321 19f76e0fb4e9ce13cf300e57f9a3807b 593 Pfam PF07730 Histidine kinase 392 455 2.9E-17 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Y11_12321 19f76e0fb4e9ce13cf300e57f9a3807b 593 SUPERFAMILY SSF55874 463 585 7.78E-15 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_12321 19f76e0fb4e9ce13cf300e57f9a3807b 593 SMART SM00387 496 589 2.6E-4 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_12321 19f76e0fb4e9ce13cf300e57f9a3807b 593 Gene3D G3DSA:3.30.565.10 456 590 9.6E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_12321 19f76e0fb4e9ce13cf300e57f9a3807b 593 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 127 2.5E-7 T 13-10-2018 IPR029095 NarX-like, N-terminal Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 53 67 8.6E-32 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 86 99 8.6E-32 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 314 325 8.6E-32 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 232 242 8.6E-32 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 126 140 8.6E-32 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 SUPERFAMILY SSF53671 5 337 1.24E-99 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 55 62 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 9 336 84.409 T 13-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 159 333 4.3E-56 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 10 335 4.0E-136 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 Gene3D G3DSA:3.40.50.1370 153 322 4.0E-139 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 55 74 4.4E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 137 148 4.4E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 300 323 4.4E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 279 4.4E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 Gene3D G3DSA:3.40.50.1370 9 332 4.0E-139 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Y11_37271 1952da1b5f6bd7fdcec5e5d18d238412 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 10 150 1.7E-47 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Y11_21621 4c9a4838dced668af29886005c74cfdb 386 Gene3D G3DSA:3.90.1150.10 20 383 4.0E-141 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_21621 4c9a4838dced668af29886005c74cfdb 386 Pfam PF00155 Aminotransferase class I and II 32 383 1.9E-61 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_21621 4c9a4838dced668af29886005c74cfdb 386 Gene3D G3DSA:3.40.640.10 45 284 4.0E-141 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_21621 4c9a4838dced668af29886005c74cfdb 386 SUPERFAMILY SSF53383 9 385 3.19E-98 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_28281 6b55ce4d03edd56dffa4ecd6162fc46f 336 Gene3D G3DSA:3.30.540.10 7 320 2.2E-128 T 13-10-2018 Y11_28281 6b55ce4d03edd56dffa4ecd6162fc46f 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 3.5E-131 T 13-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Y11_28281 6b55ce4d03edd56dffa4ecd6162fc46f 336 PIRSF PIRSF004532 1 332 1.5E-138 T 13-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Y11_28281 6b55ce4d03edd56dffa4ecd6162fc46f 336 Gene3D G3DSA:3.40.190.90 110 277 2.2E-128 T 13-10-2018 Y11_28281 6b55ce4d03edd56dffa4ecd6162fc46f 336 SUPERFAMILY SSF56655 1 325 1.83E-109 T 13-10-2018 Y11_28281 6b55ce4d03edd56dffa4ecd6162fc46f 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 330 9.3E-178 T 13-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Y11_10691 07a91e38908cc6a4eea4a44e9045c05d 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 3.3E-61 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Y11_10691 07a91e38908cc6a4eea4a44e9045c05d 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 3.9E-80 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Y11_10691 07a91e38908cc6a4eea4a44e9045c05d 196 PIRSF PIRSF015617 1 196 2.9E-69 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Y11_10691 07a91e38908cc6a4eea4a44e9045c05d 196 Gene3D G3DSA:3.40.50.300 6 196 2.1E-73 T 13-10-2018 Y11_10691 07a91e38908cc6a4eea4a44e9045c05d 196 SUPERFAMILY SSF52540 8 196 7.88E-77 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_15501 a79b6664ffecf23af4fc6f1394ea17d8 324 SMART SM00448 187 312 3.0E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_15501 a79b6664ffecf23af4fc6f1394ea17d8 324 Gene3D G3DSA:2.30.30.40 36 155 1.9E-21 T 13-10-2018 Y11_15501 a79b6664ffecf23af4fc6f1394ea17d8 324 SUPERFAMILY SSF52172 189 320 4.84E-21 T 13-10-2018 IPR011006 CheY-like superfamily Y11_15501 a79b6664ffecf23af4fc6f1394ea17d8 324 Pfam PF00072 Response regulator receiver domain 190 312 2.5E-13 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_15501 a79b6664ffecf23af4fc6f1394ea17d8 324 SUPERFAMILY SSF50341 17 164 2.35E-25 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Y11_15501 a79b6664ffecf23af4fc6f1394ea17d8 324 Gene3D G3DSA:2.40.50.180 45 161 1.9E-21 T 13-10-2018 Y11_15501 a79b6664ffecf23af4fc6f1394ea17d8 324 Gene3D G3DSA:3.40.50.2300 173 324 3.8E-21 T 13-10-2018 Y11_15501 a79b6664ffecf23af4fc6f1394ea17d8 324 PIRSF PIRSF002867 1 320 1.3E-99 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV Y11_15501 a79b6664ffecf23af4fc6f1394ea17d8 324 Pfam PF01584 CheW-like domain 21 163 2.4E-31 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Y11_15501 a79b6664ffecf23af4fc6f1394ea17d8 324 SMART SM00260 17 161 5.6E-20 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Y11_31141 07f5ce8dee26d309a561d277bbf77c27 340 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 246 311 1.8E-17 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Y11_31141 07f5ce8dee26d309a561d277bbf77c27 340 Gene3D G3DSA:3.40.50.300 15 340 2.3E-94 T 13-10-2018 Y11_31141 07f5ce8dee26d309a561d277bbf77c27 340 Pfam PF00005 ABC transporter 43 194 1.7E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_31141 07f5ce8dee26d309a561d277bbf77c27 340 SMART SM00382 52 244 3.5E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_31141 07f5ce8dee26d309a561d277bbf77c27 340 SUPERFAMILY SSF52540 18 266 1.27E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_31141 07f5ce8dee26d309a561d277bbf77c27 340 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 245 329 2.5E-25 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Y11_31141 07f5ce8dee26d309a561d277bbf77c27 340 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_40681 d8d9304ccc379c88de347110ce3fe001 290 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 280 1.2E-79 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Y11_40681 d8d9304ccc379c88de347110ce3fe001 290 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Y11_40681 d8d9304ccc379c88de347110ce3fe001 290 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 286 6.2E-105 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Y11_40681 d8d9304ccc379c88de347110ce3fe001 290 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 285 20.484 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Y11_22281 e659d2efefe19224536df6d2f31abb6f 420 Pfam PF13433 Periplasmic binding protein domain 39 383 2.0E-82 T 13-10-2018 Y11_22281 e659d2efefe19224536df6d2f31abb6f 420 Gene3D G3DSA:3.40.50.2300 154 383 5.8E-114 T 13-10-2018 Y11_22281 e659d2efefe19224536df6d2f31abb6f 420 TIGRFAM TIGR03669 urea_ABC_arch: urea ABC transporter, substrate-binding protein 39 413 1.8E-183 T 13-10-2018 IPR019968 Urea ABC transporter, substrate-binding protein Y11_22281 e659d2efefe19224536df6d2f31abb6f 420 Gene3D G3DSA:3.40.50.2300 41 368 5.8E-114 T 13-10-2018 Y11_22281 e659d2efefe19224536df6d2f31abb6f 420 SUPERFAMILY SSF53822 38 387 1.02E-93 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_32651 b2b9404baa00674e2f92f5b72b4d8b4c 255 Pfam PF00005 ABC transporter 17 156 5.1E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_32651 b2b9404baa00674e2f92f5b72b4d8b4c 255 SUPERFAMILY SSF52540 1 213 1.12E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_32651 b2b9404baa00674e2f92f5b72b4d8b4c 255 Gene3D G3DSA:3.40.50.300 1 240 1.0E-61 T 13-10-2018 Y11_32651 b2b9404baa00674e2f92f5b72b4d8b4c 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_32651 b2b9404baa00674e2f92f5b72b4d8b4c 255 SMART SM00382 26 215 7.8E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_06851 b4e260d7bf39bdd69191ce18ecb18aad 175 PIRSF PIRSF017018 1 175 3.2E-73 T 13-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type Y11_06851 b4e260d7bf39bdd69191ce18ecb18aad 175 Pfam PF10634 Fe2+ transport protein 25 173 1.7E-70 T 13-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type Y11_06851 b4e260d7bf39bdd69191ce18ecb18aad 175 Gene3D G3DSA:2.60.40.2480 23 175 2.7E-77 T 13-10-2018 IPR038482 Periplasmic metal-binding protein tp34-type superfamily Y11_41221 04ac6a823dd060262ef0896d38fa9793 57 Gene3D G3DSA:1.10.760.10 1 57 1.1E-16 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Y11_41221 04ac6a823dd060262ef0896d38fa9793 57 SUPERFAMILY SSF46626 1 56 2.36E-14 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Y11_26631 33a50c72b32b8cb44037ef808a223873 244 Gene3D G3DSA:3.60.20.10 2 225 2.7E-29 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_26631 33a50c72b32b8cb44037ef808a223873 244 SUPERFAMILY SSF56235 2 239 5.9E-38 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_26631 33a50c72b32b8cb44037ef808a223873 244 PIRSF PIRSF009120 1 244 1.8E-109 T 13-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 Y11_26631 33a50c72b32b8cb44037ef808a223873 244 Pfam PF00227 Proteasome subunit 4 185 3.2E-9 T 13-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Y11_35311 c38632268dc61adc7f122d2146cb2ee7 235 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 215 231 4.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_35311 c38632268dc61adc7f122d2146cb2ee7 235 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 200 215 4.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_35311 c38632268dc61adc7f122d2146cb2ee7 235 Pfam PF12833 Helix-turn-helix domain 154 231 1.5E-22 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_35311 c38632268dc61adc7f122d2146cb2ee7 235 SMART SM00342 148 231 1.3E-22 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_35311 c38632268dc61adc7f122d2146cb2ee7 235 Gene3D G3DSA:1.10.10.60 131 234 2.7E-25 T 13-10-2018 Y11_35311 c38632268dc61adc7f122d2146cb2ee7 235 SUPERFAMILY SSF46689 185 232 4.08E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_26431 a0f4e1b009524a81602a3feeb2130e82 267 SUPERFAMILY SSF52540 8 237 1.61E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_26431 a0f4e1b009524a81602a3feeb2130e82 267 Pfam PF00005 ABC transporter 26 172 3.3E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_26431 a0f4e1b009524a81602a3feeb2130e82 267 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_26431 a0f4e1b009524a81602a3feeb2130e82 267 SMART SM00382 33 230 3.1E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_26431 a0f4e1b009524a81602a3feeb2130e82 267 Gene3D G3DSA:3.40.50.300 6 249 5.3E-64 T 13-10-2018 Y11_35911 b1c681bc02fbfe86aea8b408c50a39ca 343 TIGRFAM TIGR00238 TIGR00238: KamA family protein 4 328 4.9E-135 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Y11_35911 b1c681bc02fbfe86aea8b408c50a39ca 343 Gene3D G3DSA:3.20.20.70 51 334 1.6E-89 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_35911 b1c681bc02fbfe86aea8b408c50a39ca 343 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 4.4E-159 T 13-10-2018 IPR022462 Lysine-2,3-aminomutase-like Y11_35911 b1c681bc02fbfe86aea8b408c50a39ca 343 Pfam PF04055 Radical SAM superfamily 118 264 2.4E-9 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_35911 b1c681bc02fbfe86aea8b408c50a39ca 343 PIRSF PIRSF004911 3 343 2.5E-119 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Y11_35911 b1c681bc02fbfe86aea8b408c50a39ca 343 Pfam PF13353 4Fe-4S single cluster domain 111 183 8.6E-7 T 13-10-2018 Y11_35911 b1c681bc02fbfe86aea8b408c50a39ca 343 SUPERFAMILY SSF102114 102 324 3.27E-28 T 13-10-2018 Y11_06251 0678c314baa4d2bffc4a047bee27c3b1 759 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 742 759 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site Y11_06251 0678c314baa4d2bffc4a047bee27c3b1 759 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 73 - T 13-10-2018 IPR010916 TonB box, conserved site Y11_06251 0678c314baa4d2bffc4a047bee27c3b1 759 Pfam PF07715 TonB-dependent Receptor Plug Domain 107 200 1.3E-9 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Y11_06251 0678c314baa4d2bffc4a047bee27c3b1 759 Gene3D G3DSA:2.40.170.20 220 759 1.7E-72 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Y11_06251 0678c314baa4d2bffc4a047bee27c3b1 759 Pfam PF00593 TonB dependent receptor 281 757 1.9E-29 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Y11_06251 0678c314baa4d2bffc4a047bee27c3b1 759 SUPERFAMILY SSF56935 57 759 4.4E-91 T 13-10-2018 Y11_06251 0678c314baa4d2bffc4a047bee27c3b1 759 Gene3D G3DSA:2.170.130.10 102 219 5.1E-16 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Y11_06251 0678c314baa4d2bffc4a047bee27c3b1 759 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 109 759 1.1E-166 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 Y11_40281 6c8f0b617b99234571dfbeb290a6f5bc 127 Pfam PF01638 HxlR-like helix-turn-helix 32 120 3.1E-25 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type Y11_40281 6c8f0b617b99234571dfbeb290a6f5bc 127 SUPERFAMILY SSF46785 21 123 2.85E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_40281 6c8f0b617b99234571dfbeb290a6f5bc 127 Gene3D G3DSA:1.10.10.10 8 126 1.3E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_04521 5ebeb8c6ae826347e266efd88c68a2e8 706 SUPERFAMILY SSF53335 147 373 1.41E-37 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_04521 5ebeb8c6ae826347e266efd88c68a2e8 706 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 702 32.262 T 13-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 Y11_04521 5ebeb8c6ae826347e266efd88c68a2e8 706 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Y11_04521 5ebeb8c6ae826347e266efd88c68a2e8 706 Gene3D G3DSA:3.30.2130.30 5 255 9.1E-145 T 13-10-2018 Y11_04521 5ebeb8c6ae826347e266efd88c68a2e8 706 PIRSF PIRSF037618 1 703 1.8E-295 T 13-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 Y11_04521 5ebeb8c6ae826347e266efd88c68a2e8 706 SUPERFAMILY SSF53335 396 701 1.21E-67 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_04521 5ebeb8c6ae826347e266efd88c68a2e8 706 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 13-10-2018 IPR000241 Putative RNA methylase domain Y11_04521 5ebeb8c6ae826347e266efd88c68a2e8 706 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 1.6E-61 T 13-10-2018 IPR000241 Putative RNA methylase domain Y11_04521 5ebeb8c6ae826347e266efd88c68a2e8 706 Gene3D G3DSA:3.40.50.150 169 372 9.1E-145 T 13-10-2018 Y11_04521 5ebeb8c6ae826347e266efd88c68a2e8 706 Gene3D G3DSA:3.40.50.150 484 702 2.3E-74 T 13-10-2018 Y11_04521 5ebeb8c6ae826347e266efd88c68a2e8 706 Gene3D G3DSA:3.30.750.80 392 483 6.7E-36 T 13-10-2018 Y11_04521 5ebeb8c6ae826347e266efd88c68a2e8 706 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 438 663 3.2E-19 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Y11_04521 5ebeb8c6ae826347e266efd88c68a2e8 706 SMART SM00981 56 154 4.1E-18 T 13-10-2018 IPR004114 THUMP domain GO:0003723 Y11_04521 5ebeb8c6ae826347e266efd88c68a2e8 706 Pfam PF02926 THUMP domain 23 152 5.5E-15 T 13-10-2018 IPR004114 THUMP domain GO:0003723 Y11_33011 b9a84029084e7abec8fd2ddd2f780de3 130 Gene3D G3DSA:3.30.1370.30 2 72 9.8E-28 T 13-10-2018 Y11_33011 b9a84029084e7abec8fd2ddd2f780de3 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.778 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33011 b9a84029084e7abec8fd2ddd2f780de3 130 Pfam PF00410 Ribosomal protein S8 5 129 9.5E-49 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33011 b9a84029084e7abec8fd2ddd2f780de3 130 SUPERFAMILY SSF56047 5 129 2.22E-46 T 13-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33011 b9a84029084e7abec8fd2ddd2f780de3 130 Gene3D G3DSA:3.30.1490.10 73 130 1.4E-25 T 13-10-2018 Y11_33011 b9a84029084e7abec8fd2ddd2f780de3 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_38391 b8604bb9fd4fff0c28bc3d85f5b1107e 821 SUPERFAMILY SSF55729 722 820 2.34E-7 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_38391 b8604bb9fd4fff0c28bc3d85f5b1107e 821 Pfam PF03995 Peptidase inhibitor family I36 22 80 4.5E-6 T 13-10-2018 Y11_38391 b8604bb9fd4fff0c28bc3d85f5b1107e 821 Gene3D G3DSA:3.40.630.30 678 821 5.2E-7 T 13-10-2018 Y11_38391 b8604bb9fd4fff0c28bc3d85f5b1107e 821 SUPERFAMILY SSF49695 23 104 2.29E-13 T 13-10-2018 IPR011024 Gamma-crystallin-like Y11_38391 b8604bb9fd4fff0c28bc3d85f5b1107e 821 SMART SM00247 25 108 0.0059 T 13-10-2018 IPR001064 Beta/gamma crystallin Y11_38391 b8604bb9fd4fff0c28bc3d85f5b1107e 821 Gene3D G3DSA:2.60.20.10 4 109 2.6E-19 T 13-10-2018 Y11_38391 b8604bb9fd4fff0c28bc3d85f5b1107e 821 Gene3D G3DSA:2.60.20.10 110 206 1.7E-21 T 13-10-2018 Y11_38391 b8604bb9fd4fff0c28bc3d85f5b1107e 821 SUPERFAMILY SSF49695 100 204 8.18E-12 T 13-10-2018 IPR011024 Gamma-crystallin-like Y11_02251 b1284aefe0877f117385b0121881e652 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 87 107 3.2E-10 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Y11_02251 b1284aefe0877f117385b0121881e652 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 420 442 3.2E-10 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Y11_02251 b1284aefe0877f117385b0121881e652 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 61 85 3.2E-10 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Y11_02251 b1284aefe0877f117385b0121881e652 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 268 290 3.2E-10 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Y11_02251 b1284aefe0877f117385b0121881e652 614 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 611 1.9E-232 T 13-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02251 b1284aefe0877f117385b0121881e652 614 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 124 2.7E-23 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02251 b1284aefe0877f117385b0121881e652 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 2.1E-56 T 13-10-2018 Y11_02251 b1284aefe0877f117385b0121881e652 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 2.1E-56 T 13-10-2018 Y11_02251 b1284aefe0877f117385b0121881e652 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 2.1E-56 T 13-10-2018 Y11_02251 b1284aefe0877f117385b0121881e652 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 2.1E-56 T 13-10-2018 Y11_02251 b1284aefe0877f117385b0121881e652 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 2.1E-56 T 13-10-2018 Y11_02251 b1284aefe0877f117385b0121881e652 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 2.1E-56 T 13-10-2018 Y11_02251 b1284aefe0877f117385b0121881e652 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 181 2.1E-56 T 13-10-2018 Y11_02251 b1284aefe0877f117385b0121881e652 614 Pfam PF00361 Proton-conducting membrane transporter 136 428 1.0E-94 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 SMART SM00487 22 218 2.5E-32 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 14 603 8.0E-266 T 13-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 Pfam PF09382 RQC domain 406 517 2.0E-37 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 SMART SM00956 411 514 8.3E-53 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 Gene3D G3DSA:1.10.150.80 524 608 1.3E-29 T 13-10-2018 Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 464 1.4E-200 T 13-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 Pfam PF00271 Helicase conserved C-terminal domain 228 330 1.2E-19 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 Gene3D G3DSA:3.40.50.300 209 340 7.8E-44 T 13-10-2018 Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 Pfam PF00570 HRDC domain 535 601 1.3E-23 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 Gene3D G3DSA:1.10.10.10 341 523 5.1E-51 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 SUPERFAMILY SSF47819 532 607 5.01E-26 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 Gene3D G3DSA:3.40.50.300 2 208 5.9E-87 T 13-10-2018 Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 SUPERFAMILY SSF52540 15 201 1.29E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 SUPERFAMILY SSF52540 208 457 4.6E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 SMART SM00490 250 331 5.9E-28 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 SMART SM00341 531 611 8.4E-28 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 Pfam PF16124 RecQ zinc-binding 343 404 5.1E-16 T 13-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Y11_34031 ab49421ffa59a913a969b4fa6868eda0 616 Pfam PF00270 DEAD/DEAH box helicase 28 185 4.8E-21 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Y11_33491 fc0247f7622ef461a0e61d168f246d97 298 Pfam PF03466 LysR substrate binding domain 89 294 5.1E-40 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_33491 fc0247f7622ef461a0e61d168f246d97 298 Gene3D G3DSA:3.40.190.10 90 290 1.7E-30 T 13-10-2018 Y11_33491 fc0247f7622ef461a0e61d168f246d97 298 Gene3D G3DSA:3.40.190.10 165 269 1.7E-30 T 13-10-2018 Y11_33491 fc0247f7622ef461a0e61d168f246d97 298 Gene3D G3DSA:1.10.10.10 1 83 1.2E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_33491 fc0247f7622ef461a0e61d168f246d97 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.5E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_33491 fc0247f7622ef461a0e61d168f246d97 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_33491 fc0247f7622ef461a0e61d168f246d97 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_33491 fc0247f7622ef461a0e61d168f246d97 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_33491 fc0247f7622ef461a0e61d168f246d97 298 SUPERFAMILY SSF53850 89 297 1.57E-35 T 13-10-2018 Y11_33491 fc0247f7622ef461a0e61d168f246d97 298 SUPERFAMILY SSF46785 1 111 4.49E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_18011 2e352a39de8870c0bddd837822289b37 328 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 34 319 1.1E-16 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Y11_18011 2e352a39de8870c0bddd837822289b37 328 Gene3D G3DSA:2.40.50.100 207 241 1.7E-25 T 13-10-2018 Y11_18011 2e352a39de8870c0bddd837822289b37 328 Gene3D G3DSA:1.10.287.470 179 206 1.7E-25 T 13-10-2018 Y11_18011 2e352a39de8870c0bddd837822289b37 328 Gene3D G3DSA:1.10.287.470 112 173 3.0E-6 T 13-10-2018 Y11_18011 2e352a39de8870c0bddd837822289b37 328 Gene3D G3DSA:1.10.287.470 78 111 3.7E-14 T 13-10-2018 Y11_18011 2e352a39de8870c0bddd837822289b37 328 SUPERFAMILY SSF111369 178 324 7.98E-13 T 13-10-2018 Y11_18011 2e352a39de8870c0bddd837822289b37 328 Hamap MF_01304 UPF0194 membrane protein YbhG [ybhG]. 2 328 51.177 T 13-10-2018 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG Y11_18011 2e352a39de8870c0bddd837822289b37 328 Gene3D G3DSA:2.40.30.170 242 322 1.7E-25 T 13-10-2018 Y11_18011 2e352a39de8870c0bddd837822289b37 328 Gene3D G3DSA:2.40.50.100 43 77 3.7E-14 T 13-10-2018 Y11_18011 2e352a39de8870c0bddd837822289b37 328 SUPERFAMILY SSF111369 41 119 1.2E-8 T 13-10-2018 Y11_p0851 258449283c28b9e09c91c83f3d23c778 146 Pfam PF09621 Type III secretion system regulator (LcrR) 4 142 1.6E-70 T 13-10-2018 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 Y11_p0851 258449283c28b9e09c91c83f3d23c778 146 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 2 142 6.8E-72 T 13-10-2018 IPR013405 Type III secretion system regulator, LcrR Y11_13731 f13e1d72386b527c5daa8bc583606828 196 Pfam PF00881 Nitroreductase family 18 174 2.2E-15 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Y11_13731 f13e1d72386b527c5daa8bc583606828 196 Gene3D G3DSA:3.40.109.10 8 195 9.3E-27 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Y11_13731 f13e1d72386b527c5daa8bc583606828 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 45.695 T 13-10-2018 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 Y11_13731 f13e1d72386b527c5daa8bc583606828 196 SUPERFAMILY SSF55469 12 193 2.36E-39 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Y11_04211 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 445 528 1.8E-20 T 13-10-2018 Y11_04211 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 255 371 8.24E-30 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_04211 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 6 97 3.1E-17 T 13-10-2018 Y11_04211 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 98 181 4.6E-7 T 13-10-2018 Y11_04211 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 358 444 1.6E-22 T 13-10-2018 Y11_04211 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 269 357 1.2E-29 T 13-10-2018 Y11_04211 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 1 112 4.91E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_04211 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 189 275 7.46E-27 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_04211 4570ae43d49be061c1037362266f69ae 557 PIRSF PIRSF002111 1 534 2.5E-217 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Y11_04211 4570ae43d49be061c1037362266f69ae 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.3E-236 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Y11_04211 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 363 444 4.77E-20 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_04211 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 275 347 6.5E-26 T 13-10-2018 IPR022967 RNA-binding domain, S1 Y11_04211 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 19 87 5.0E-5 T 13-10-2018 IPR022967 RNA-binding domain, S1 Y11_04211 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 362 434 1.8E-20 T 13-10-2018 IPR022967 RNA-binding domain, S1 Y11_04211 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 103 171 8.1E-9 T 13-10-2018 IPR022967 RNA-binding domain, S1 Y11_04211 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 449 520 2.0E-21 T 13-10-2018 IPR022967 RNA-binding domain, S1 Y11_04211 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 190 260 2.8E-28 T 13-10-2018 IPR022967 RNA-binding domain, S1 Y11_04211 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 20 78 6.7E-7 T 13-10-2018 IPR003029 S1 domain GO:0003676 Y11_04211 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 279 347 2.8E-19 T 13-10-2018 IPR003029 S1 domain GO:0003676 Y11_04211 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 Y11_04211 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 449 520 4.3E-16 T 13-10-2018 IPR003029 S1 domain GO:0003676 Y11_04211 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 103 171 6.9E-10 T 13-10-2018 IPR003029 S1 domain GO:0003676 Y11_04211 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 361 434 3.3E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 Y11_04211 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 104 185 4.25E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_04211 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 429 535 4.62E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_04211 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 6.7E-99 T 13-10-2018 Y11_04211 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 6.7E-99 T 13-10-2018 Y11_04211 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 6.7E-99 T 13-10-2018 Y11_04211 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 6.7E-99 T 13-10-2018 Y11_04211 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 6.7E-99 T 13-10-2018 Y11_04211 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 6.7E-99 T 13-10-2018 Y11_04211 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 6.7E-99 T 13-10-2018 Y11_04211 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 6.7E-99 T 13-10-2018 Y11_04211 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 6.7E-99 T 13-10-2018 Y11_04211 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 187 268 1.1E-27 T 13-10-2018 Y11_30861 ca90361336704856f2c48ece31d40c2e 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 3.0E-20 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Y11_30861 ca90361336704856f2c48ece31d40c2e 104 Gene3D G3DSA:3.40.50.2300 2 104 2.9E-34 T 13-10-2018 Y11_30861 ca90361336704856f2c48ece31d40c2e 104 SUPERFAMILY SSF52794 1 102 4.71E-35 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Y11_27151 72e117db30a0be4356ff33fdd7951af0 639 SUPERFAMILY SSF141868 399 630 1.57E-33 T 13-10-2018 IPR035919 EAL domain superfamily Y11_27151 72e117db30a0be4356ff33fdd7951af0 639 SUPERFAMILY SSF55073 230 383 1.45E-17 T 13-10-2018 IPR029787 Nucleotide cyclase Y11_27151 72e117db30a0be4356ff33fdd7951af0 639 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 376 7.1E-20 T 13-10-2018 IPR000160 GGDEF domain Y11_27151 72e117db30a0be4356ff33fdd7951af0 639 SMART SM00267 213 382 1.3E-14 T 13-10-2018 IPR000160 GGDEF domain Y11_27151 72e117db30a0be4356ff33fdd7951af0 639 Pfam PF00563 EAL domain 400 627 4.6E-38 T 13-10-2018 IPR001633 EAL domain Y11_27151 72e117db30a0be4356ff33fdd7951af0 639 Gene3D G3DSA:3.20.20.450 391 628 3.5E-31 T 13-10-2018 IPR035919 EAL domain superfamily Y11_27151 72e117db30a0be4356ff33fdd7951af0 639 Gene3D G3DSA:3.30.70.270 207 383 2.4E-19 T 13-10-2018 Y11_27151 72e117db30a0be4356ff33fdd7951af0 639 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 33 130 8.4E-31 T 13-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 Y11_27151 72e117db30a0be4356ff33fdd7951af0 639 SMART SM00052 392 632 3.3E-22 T 13-10-2018 IPR001633 EAL domain Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 SUPERFAMILY SSF55073 693 851 1.1E-44 T 13-10-2018 IPR029787 Nucleotide cyclase Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 SUPERFAMILY SSF55785 440 547 3.22E-17 T 13-10-2018 IPR035965 PAS domain superfamily Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 Gene3D G3DSA:3.30.70.270 677 852 1.4E-52 T 13-10-2018 Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 SMART SM00086 377 419 4.6E-8 T 13-10-2018 IPR001610 PAC motif Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 SMART SM00086 504 546 0.0029 T 13-10-2018 IPR001610 PAC motif Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 SMART SM00086 635 677 0.16 T 13-10-2018 IPR001610 PAC motif Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 Pfam PF05231 MASE1 22 280 1.2E-18 T 13-10-2018 IPR007895 MASE1 Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 ProDom PD035357 TRANSFERASE 2.1.1.- LYSINE METHYLTRANSFERASE N-METHYLTRANSFERASE FLAGELLUM LYSINE-N-METHYLASE BIOSYNTHETIC FLAGELLIN N-METHYLATION 1150 1301 2.0E-43 T 13-10-2018 IPR020193 Flagellin lysine-N-methylase, C-terminal Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 Gene3D G3DSA:3.30.450.20 429 498 6.2E-13 T 13-10-2018 Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 SMART SM00267 677 849 9.6E-56 T 13-10-2018 IPR000160 GGDEF domain Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 Gene3D G3DSA:3.30.450.20 548 674 1.5E-20 T 13-10-2018 Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 Gene3D G3DSA:2.10.70.100 500 547 1.3E-9 T 13-10-2018 Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 Pfam PF08448 PAS fold 564 678 4.6E-8 T 13-10-2018 IPR013656 PAS fold-4 Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 685 848 6.3E-39 T 13-10-2018 IPR000160 GGDEF domain Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 Gene3D G3DSA:3.30.450.20 295 416 3.2E-21 T 13-10-2018 Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 Pfam PF08447 PAS fold 454 539 9.2E-16 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 Pfam PF08447 PAS fold 328 411 1.9E-11 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 Pfam PF00990 Diguanylate cyclase, GGDEF domain 688 844 2.1E-40 T 13-10-2018 IPR000160 GGDEF domain Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 SUPERFAMILY SSF55785 297 416 1.34E-22 T 13-10-2018 IPR035965 PAS domain superfamily Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 301 423 7.0E-28 T 13-10-2018 IPR000014 PAS domain Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 555 681 3.6E-11 T 13-10-2018 IPR000014 PAS domain Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 SMART SM00091 431 498 0.058 T 13-10-2018 IPR000014 PAS domain Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 SMART SM00091 304 370 4.7E-10 T 13-10-2018 IPR000014 PAS domain Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 SMART SM00091 558 627 2.0E-5 T 13-10-2018 IPR000014 PAS domain Y11_43431 da5f62903cffdf522a24d35a1019cb04 1302 SUPERFAMILY SSF55785 542 672 3.87E-17 T 13-10-2018 IPR035965 PAS domain superfamily Y11_35151 4f0593781fecfa7a068e4232bf2cd896 653 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 21 644 0.0 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Y11_35151 4f0593781fecfa7a068e4232bf2cd896 653 Gene3D G3DSA:3.40.50.12780 53 516 1.5E-104 T 13-10-2018 Y11_35151 4f0593781fecfa7a068e4232bf2cd896 653 ProSitePatterns PS00455 Putative AMP-binding domain signature. 262 273 - T 13-10-2018 IPR020845 AMP-binding, conserved site Y11_35151 4f0593781fecfa7a068e4232bf2cd896 653 Pfam PF00501 AMP-binding enzyme 84 523 1.3E-91 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Y11_35151 4f0593781fecfa7a068e4232bf2cd896 653 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 4.0E-26 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Y11_35151 4f0593781fecfa7a068e4232bf2cd896 653 Gene3D G3DSA:3.30.300.30 519 653 9.1E-34 T 13-10-2018 Y11_35151 4f0593781fecfa7a068e4232bf2cd896 653 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 3 646 53.266 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Y11_35151 4f0593781fecfa7a068e4232bf2cd896 653 SUPERFAMILY SSF56801 10 644 1.57E-189 T 13-10-2018 Y11_35151 4f0593781fecfa7a068e4232bf2cd896 653 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 25 82 2.9E-19 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Y11_10301 54e378646dc29cd967fa0a44d701772d 233 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.138 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Y11_10301 54e378646dc29cd967fa0a44d701772d 233 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 209 6.9E-85 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Y11_10301 54e378646dc29cd967fa0a44d701772d 233 PIRSF PIRSF006102 1 219 4.3E-77 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Y11_10301 54e378646dc29cd967fa0a44d701772d 233 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 199 1.1E-63 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Y11_27251 3823bde9ffe214f79f12688f7455e47c 286 SUPERFAMILY SSF51395 2 284 1.65E-77 T 13-10-2018 Y11_27251 3823bde9ffe214f79f12688f7455e47c 286 Gene3D G3DSA:3.20.20.70 1 213 5.7E-65 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_27251 3823bde9ffe214f79f12688f7455e47c 286 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 59 77 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Y11_27251 3823bde9ffe214f79f12688f7455e47c 286 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 1 284 2.6E-120 T 13-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 Y11_27251 3823bde9ffe214f79f12688f7455e47c 286 PIRSF PIRSF006621 1 286 2.3E-87 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Y11_27251 3823bde9ffe214f79f12688f7455e47c 286 Gene3D G3DSA:1.10.1200.80 218 286 3.2E-7 T 13-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 Y11_27251 3823bde9ffe214f79f12688f7455e47c 286 Pfam PF01207 Dihydrouridine synthase (Dus) 1 283 3.8E-104 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Y11_31841 91941b1cbbf3e7b4e339efd0b2e47e7b 727 Pfam PF00128 Alpha amylase, catalytic domain 273 347 1.5E-9 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Y11_31841 91941b1cbbf3e7b4e339efd0b2e47e7b 727 SMART SM00642 247 596 3.1E-6 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Y11_31841 91941b1cbbf3e7b4e339efd0b2e47e7b 727 SUPERFAMILY SSF81296 117 223 1.75E-35 T 13-10-2018 IPR014756 Immunoglobulin E-set Y11_31841 91941b1cbbf3e7b4e339efd0b2e47e7b 727 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 2.0E-24 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Y11_31841 91941b1cbbf3e7b4e339efd0b2e47e7b 727 Gene3D G3DSA:2.60.40.10 2 221 1.6E-77 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_31841 91941b1cbbf3e7b4e339efd0b2e47e7b 727 SUPERFAMILY SSF51011 623 724 3.69E-36 T 13-10-2018 Y11_31841 91941b1cbbf3e7b4e339efd0b2e47e7b 727 SUPERFAMILY SSF81296 16 115 1.47E-16 T 13-10-2018 IPR014756 Immunoglobulin E-set Y11_31841 91941b1cbbf3e7b4e339efd0b2e47e7b 727 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.715 T 13-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Y11_31841 91941b1cbbf3e7b4e339efd0b2e47e7b 727 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 2.1E-300 T 13-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Y11_31841 91941b1cbbf3e7b4e339efd0b2e47e7b 727 SUPERFAMILY SSF51445 230 621 6.21E-113 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_31841 91941b1cbbf3e7b4e339efd0b2e47e7b 727 Gene3D G3DSA:3.20.20.80 231 612 1.5E-171 T 13-10-2018 Y11_31841 91941b1cbbf3e7b4e339efd0b2e47e7b 727 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 724 8.8E-23 T 13-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Y11_31841 91941b1cbbf3e7b4e339efd0b2e47e7b 727 Gene3D G3DSA:2.60.40.1180 623 726 1.9E-40 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta Y11_31841 91941b1cbbf3e7b4e339efd0b2e47e7b 727 PIRSF PIRSF000463 6 726 2.0E-286 T 13-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Y11_26021 7e2db3612465e714e0380fbfbc8d5ca3 132 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 118 8.0E-24 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Y11_26021 7e2db3612465e714e0380fbfbc8d5ca3 132 Gene3D G3DSA:3.90.180.10 14 132 6.0E-48 T 13-10-2018 Y11_26021 7e2db3612465e714e0380fbfbc8d5ca3 132 SUPERFAMILY SSF50129 3 131 2.74E-38 T 13-10-2018 IPR011032 GroES-like superfamily Y11_26021 7e2db3612465e714e0380fbfbc8d5ca3 132 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Y11_16061 e262ab77c1c3922b2c0f8109f61c8076 189 SUPERFAMILY SSF53335 3 146 1.21E-26 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_16061 e262ab77c1c3922b2c0f8109f61c8076 189 Pfam PF13847 Methyltransferase domain 30 103 5.5E-8 T 13-10-2018 IPR025714 Methyltransferase domain Y11_16061 e262ab77c1c3922b2c0f8109f61c8076 189 Gene3D G3DSA:3.40.50.150 1 189 8.1E-58 T 13-10-2018 Y11_16061 e262ab77c1c3922b2c0f8109f61c8076 189 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 13 132 2.5E-37 T 13-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 Y11_38701 00fc0b118c496759c085e938d6e09fea 233 Gene3D G3DSA:3.40.50.300 1 226 1.4E-59 T 13-10-2018 Y11_38701 00fc0b118c496759c085e938d6e09fea 233 SUPERFAMILY SSF52540 1 221 5.8E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_38701 00fc0b118c496759c085e938d6e09fea 233 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_38701 00fc0b118c496759c085e938d6e09fea 233 SMART SM00382 24 214 1.8E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_38701 00fc0b118c496759c085e938d6e09fea 233 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 210 1.7E-100 T 13-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 Y11_38701 00fc0b118c496759c085e938d6e09fea 233 Pfam PF00005 ABC transporter 19 157 5.8E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_08161 0c348cb8c1bf0babef2fddd54f7a761f 1018 SUPERFAMILY SSF46548 516 691 4.06E-8 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Y11_08161 0c348cb8c1bf0babef2fddd54f7a761f 1018 Gene3D G3DSA:3.30.465.40 19 210 4.7E-45 T 13-10-2018 Y11_08161 0c348cb8c1bf0babef2fddd54f7a761f 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 674 685 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_08161 0c348cb8c1bf0babef2fddd54f7a761f 1018 Pfam PF13183 4Fe-4S dicluster domain 577 688 1.6E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_08161 0c348cb8c1bf0babef2fddd54f7a761f 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 1.1E-62 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Y11_08161 0c348cb8c1bf0babef2fddd54f7a761f 1018 SUPERFAMILY SSF55103 258 542 1.96E-52 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Y11_08161 0c348cb8c1bf0babef2fddd54f7a761f 1018 Pfam PF01565 FAD binding domain 52 192 3.4E-36 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Y11_08161 0c348cb8c1bf0babef2fddd54f7a761f 1018 SUPERFAMILY SSF56176 18 282 3.19E-53 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Y11_16371 354aace805fb028d0c18d7c59588966c 234 Gene3D G3DSA:3.30.230.10 1 85 1.1E-12 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y11_16371 354aace805fb028d0c18d7c59588966c 234 Pfam PF00288 GHMP kinases N terminal domain 20 63 1.2E-8 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Y11_16371 354aace805fb028d0c18d7c59588966c 234 SUPERFAMILY SSF54211 4 93 3.79E-14 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_35431 f22af2fb93757101ba686d6f40e73ba8 316 Pfam PF06622 SepQ protein 24 219 2.0E-5 T 13-10-2018 IPR009532 SepQ Y11_35431 f22af2fb93757101ba686d6f40e73ba8 316 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 242 312 2.8E-13 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) Y11_35431 f22af2fb93757101ba686d6f40e73ba8 316 Gene3D G3DSA:2.30.330.10 233 314 5.8E-15 T 13-10-2018 IPR036429 SpoA-like superfamily Y11_35431 f22af2fb93757101ba686d6f40e73ba8 316 SUPERFAMILY SSF101801 243 311 2.22E-12 T 13-10-2018 IPR036429 SpoA-like superfamily Y11_35431 f22af2fb93757101ba686d6f40e73ba8 316 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 29 311 8.5E-54 T 13-10-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 Y11_28271 58a9f8ef1066d3cb3bbb8929a5e38b1d 507 Gene3D G3DSA:3.30.420.40 7 259 4.4E-117 T 13-10-2018 Y11_28271 58a9f8ef1066d3cb3bbb8929a5e38b1d 507 Gene3D G3DSA:3.30.420.40 260 506 1.8E-96 T 13-10-2018 Y11_28271 58a9f8ef1066d3cb3bbb8929a5e38b1d 507 Hamap MF_00186 Glycerol kinase [glpK]. 9 503 60.127 T 13-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Y11_28271 58a9f8ef1066d3cb3bbb8929a5e38b1d 507 SUPERFAMILY SSF53067 261 503 7.03E-87 T 13-10-2018 Y11_28271 58a9f8ef1066d3cb3bbb8929a5e38b1d 507 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 368 388 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Y11_28271 58a9f8ef1066d3cb3bbb8929a5e38b1d 507 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 10 502 4.5E-231 T 13-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Y11_28271 58a9f8ef1066d3cb3bbb8929a5e38b1d 507 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 141 153 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Y11_28271 58a9f8ef1066d3cb3bbb8929a5e38b1d 507 SUPERFAMILY SSF53067 10 261 8.64E-97 T 13-10-2018 Y11_28271 58a9f8ef1066d3cb3bbb8929a5e38b1d 507 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 11 258 2.4E-92 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Y11_28271 58a9f8ef1066d3cb3bbb8929a5e38b1d 507 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 267 456 2.6E-63 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Y11_28271 58a9f8ef1066d3cb3bbb8929a5e38b1d 507 PIRSF PIRSF000538 9 507 4.6E-182 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Y11_10431 84ba6da924b8aa4502b4a0146a83abfb 249 Pfam PF08220 DeoR-like helix-turn-helix domain 5 60 2.4E-15 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_10431 84ba6da924b8aa4502b4a0146a83abfb 249 SMART SM00420 5 57 3.6E-20 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_10431 84ba6da924b8aa4502b4a0146a83abfb 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Y11_10431 84ba6da924b8aa4502b4a0146a83abfb 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 2.4E-6 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_10431 84ba6da924b8aa4502b4a0146a83abfb 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 2.4E-6 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_10431 84ba6da924b8aa4502b4a0146a83abfb 249 SMART SM01134 68 228 1.3E-51 T 13-10-2018 Y11_10431 84ba6da924b8aa4502b4a0146a83abfb 249 SUPERFAMILY SSF100950 68 228 4.69E-26 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_10431 84ba6da924b8aa4502b4a0146a83abfb 249 Pfam PF00455 DeoR C terminal sensor domain 72 227 2.4E-41 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain Y11_10431 84ba6da924b8aa4502b4a0146a83abfb 249 SUPERFAMILY SSF46785 1 60 1.19E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_10431 84ba6da924b8aa4502b4a0146a83abfb 249 Gene3D G3DSA:1.10.10.10 1 53 3.4E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_11801 110053a3ef91b779d5743f58f73cf044 261 Gene3D G3DSA:1.10.3470.10 31 261 3.2E-10 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_11801 110053a3ef91b779d5743f58f73cf044 261 SUPERFAMILY SSF81345 3 255 6.02E-42 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_11801 110053a3ef91b779d5743f58f73cf044 261 Pfam PF00950 ABC 3 transport family 1 255 5.5E-85 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Y11_31931 685623915aa710eab7a5b1df3e27363e 108 Gene3D G3DSA:3.40.250.10 1 108 8.3E-30 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Y11_31931 685623915aa710eab7a5b1df3e27363e 108 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 32.3 T 13-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 Y11_31931 685623915aa710eab7a5b1df3e27363e 108 SMART SM00450 7 102 3.8E-19 T 13-10-2018 IPR001763 Rhodanese-like domain Y11_31931 685623915aa710eab7a5b1df3e27363e 108 SUPERFAMILY SSF52821 2 100 8.51E-28 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Y11_31931 685623915aa710eab7a5b1df3e27363e 108 Pfam PF00581 Rhodanese-like domain 10 98 1.3E-14 T 13-10-2018 IPR001763 Rhodanese-like domain Y11_39021 b7ceaa12de7851a92805fbcd0cb523b8 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_39021 b7ceaa12de7851a92805fbcd0cb523b8 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 7.8E-160 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_39021 b7ceaa12de7851a92805fbcd0cb523b8 360 Pfam PF00953 Glycosyl transferase family 4 99 284 1.2E-35 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Y11_39021 b7ceaa12de7851a92805fbcd0cb523b8 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.2E-5 T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_39021 b7ceaa12de7851a92805fbcd0cb523b8 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.997 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_39021 b7ceaa12de7851a92805fbcd0cb523b8 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_38601 863d2962d08c0d55730748f776bc9500 272 SUPERFAMILY SSF53335 17 265 3.16E-77 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_38601 863d2962d08c0d55730748f776bc9500 272 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 13-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Y11_38601 863d2962d08c0d55730748f776bc9500 272 SMART SM00650 25 198 1.1E-81 T 13-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Y11_38601 863d2962d08c0d55730748f776bc9500 272 Gene3D G3DSA:1.10.8.100 201 268 1.3E-27 T 13-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Y11_38601 863d2962d08c0d55730748f776bc9500 272 Pfam PF00398 Ribosomal RNA adenine dimethylase 11 264 4.3E-77 T 13-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Y11_38601 863d2962d08c0d55730748f776bc9500 272 Gene3D G3DSA:3.40.50.150 1 199 4.7E-67 T 13-10-2018 Y11_38601 863d2962d08c0d55730748f776bc9500 272 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 3.5E-87 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Y11_38601 863d2962d08c0d55730748f776bc9500 272 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 55.739 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Y11_14281 82c4dc3ba14eb94c8f8f11a325798995 124 Gene3D G3DSA:2.30.330.10 33 124 5.8E-35 T 13-10-2018 IPR036429 SpoA-like superfamily Y11_14281 82c4dc3ba14eb94c8f8f11a325798995 124 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 104 1.4E-30 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Y11_14281 82c4dc3ba14eb94c8f8f11a325798995 124 PRINTS PR00956 Flagellar motor switch protein FliN signature 76 89 1.4E-30 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Y11_14281 82c4dc3ba14eb94c8f8f11a325798995 124 PRINTS PR00956 Flagellar motor switch protein FliN signature 43 59 1.4E-30 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Y11_14281 82c4dc3ba14eb94c8f8f11a325798995 124 PRINTS PR00956 Flagellar motor switch protein FliN signature 60 76 1.4E-30 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Y11_14281 82c4dc3ba14eb94c8f8f11a325798995 124 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 36 2.1E-15 T 13-10-2018 IPR031576 Flagellar motor switch protein FliN, N-terminal Y11_14281 82c4dc3ba14eb94c8f8f11a325798995 124 SUPERFAMILY SSF101801 41 122 5.23E-27 T 13-10-2018 IPR036429 SpoA-like superfamily Y11_14281 82c4dc3ba14eb94c8f8f11a325798995 124 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 43 113 7.9E-26 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) Y11_14281 82c4dc3ba14eb94c8f8f11a325798995 124 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 40 115 1.5E-33 T 13-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 Y11_19761 07764b95f1fa9a23c4f5a5363fac70e7 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 0.0025 T 13-10-2018 Y11_19761 07764b95f1fa9a23c4f5a5363fac70e7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.2E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_19761 07764b95f1fa9a23c4f5a5363fac70e7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.2E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_19761 07764b95f1fa9a23c4f5a5363fac70e7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.2E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_19761 07764b95f1fa9a23c4f5a5363fac70e7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.2E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_19761 07764b95f1fa9a23c4f5a5363fac70e7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.2E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_19761 07764b95f1fa9a23c4f5a5363fac70e7 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 4.2E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_19761 07764b95f1fa9a23c4f5a5363fac70e7 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.2E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_19761 07764b95f1fa9a23c4f5a5363fac70e7 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 4.2E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_19761 07764b95f1fa9a23c4f5a5363fac70e7 258 Gene3D G3DSA:3.40.50.720 1 244 2.2E-61 T 13-10-2018 Y11_19761 07764b95f1fa9a23c4f5a5363fac70e7 258 Pfam PF00106 short chain dehydrogenase 3 190 9.4E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_19761 07764b95f1fa9a23c4f5a5363fac70e7 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Y11_19761 07764b95f1fa9a23c4f5a5363fac70e7 258 SUPERFAMILY SSF51735 3 254 6.16E-57 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_22321 da9d74f0797a260f1fbbab28b43ecbd8 239 SMART SM00382 30 201 1.2E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_22321 da9d74f0797a260f1fbbab28b43ecbd8 239 Gene3D G3DSA:3.40.50.300 1 235 1.5E-57 T 13-10-2018 Y11_22321 da9d74f0797a260f1fbbab28b43ecbd8 239 SUPERFAMILY SSF52540 4 230 5.77E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_22321 da9d74f0797a260f1fbbab28b43ecbd8 239 Pfam PF00005 ABC transporter 21 167 1.5E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_41591 cc10f47d89a238e76615743c0f930866 143 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 77 2.2E-14 T 13-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Y11_41591 cc10f47d89a238e76615743c0f930866 143 Pfam PF02627 Carboxymuconolactone decarboxylase family 14 95 8.9E-15 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Y11_41591 cc10f47d89a238e76615743c0f930866 143 SUPERFAMILY SSF69118 10 142 2.02E-42 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Y11_41591 cc10f47d89a238e76615743c0f930866 143 Gene3D G3DSA:1.20.1290.10 2 143 3.8E-46 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Y11_20791 48eec476eb13c1878144857bce2479f7 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Y11_20791 48eec476eb13c1878144857bce2479f7 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 100 1.8E-20 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Y11_20791 48eec476eb13c1878144857bce2479f7 369 Gene3D G3DSA:3.40.140.10 1 136 1.1E-46 T 13-10-2018 Y11_20791 48eec476eb13c1878144857bce2479f7 369 PIRSF PIRSF006769 1 368 9.5E-131 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Y11_20791 48eec476eb13c1878144857bce2479f7 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 365 4.6E-74 T 13-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 Y11_20791 48eec476eb13c1878144857bce2479f7 369 Pfam PF01872 RibD C-terminal domain 148 361 3.1E-59 T 13-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Y11_20791 48eec476eb13c1878144857bce2479f7 369 SUPERFAMILY SSF53927 4 146 3.35E-49 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Y11_20791 48eec476eb13c1878144857bce2479f7 369 Gene3D G3DSA:3.40.430.10 137 368 1.3E-76 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Y11_20791 48eec476eb13c1878144857bce2479f7 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 362 1.4E-144 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Y11_20791 48eec476eb13c1878144857bce2479f7 369 SUPERFAMILY SSF53597 145 363 1.54E-58 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Y11_04991 c0b394f3735800344f1a0bbbff1a38f7 511 Gene3D G3DSA:1.20.1250.20 1 502 2.5E-161 T 13-10-2018 Y11_04991 c0b394f3735800344f1a0bbbff1a38f7 511 SUPERFAMILY SSF103473 20 499 1.05E-25 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_04991 c0b394f3735800344f1a0bbbff1a38f7 511 Pfam PF00854 POT family 91 463 2.2E-63 T 13-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 Y11_04991 c0b394f3735800344f1a0bbbff1a38f7 511 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 79 103 - T 13-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 Y11_04991 c0b394f3735800344f1a0bbbff1a38f7 511 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 155 167 - T 13-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 Y11_04991 c0b394f3735800344f1a0bbbff1a38f7 511 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 501 3.8E-108 T 13-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 Y11_08501 fb6bb59a680db7fc7be9f106c023bb0c 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 46.034 T 13-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 Y11_08501 fb6bb59a680db7fc7be9f106c023bb0c 424 SMART SM00363 357 419 2.0E-5 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_08501 fb6bb59a680db7fc7be9f106c023bb0c 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_08501 fb6bb59a680db7fc7be9f106c023bb0c 424 Gene3D G3DSA:1.10.240.10 228 330 8.8E-37 T 13-10-2018 Y11_08501 fb6bb59a680db7fc7be9f106c023bb0c 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 1.0E-90 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_08501 fb6bb59a680db7fc7be9f106c023bb0c 424 Pfam PF01479 S4 domain 359 400 5.9E-7 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_08501 fb6bb59a680db7fc7be9f106c023bb0c 424 Gene3D G3DSA:3.10.290.10 331 424 1.1E-28 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Y11_08501 fb6bb59a680db7fc7be9f106c023bb0c 424 SUPERFAMILY SSF52374 4 328 3.1E-108 T 13-10-2018 Y11_08501 fb6bb59a680db7fc7be9f106c023bb0c 424 SUPERFAMILY SSF55174 327 423 5.89E-21 T 13-10-2018 Y11_08501 fb6bb59a680db7fc7be9f106c023bb0c 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 423 2.1E-143 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Y11_08501 fb6bb59a680db7fc7be9f106c023bb0c 424 Gene3D G3DSA:3.40.50.620 1 227 7.5E-94 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_08501 fb6bb59a680db7fc7be9f106c023bb0c 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 2.5E-32 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Y11_08501 fb6bb59a680db7fc7be9f106c023bb0c 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 2.5E-32 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Y11_08501 fb6bb59a680db7fc7be9f106c023bb0c 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 2.5E-32 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Y11_08501 fb6bb59a680db7fc7be9f106c023bb0c 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 2.5E-32 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Y11_38721 eee8a568d8b9e8ed7f474466758f9cd2 329 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 9 329 5.5E-165 T 13-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 Y11_38721 eee8a568d8b9e8ed7f474466758f9cd2 329 Gene3D G3DSA:3.40.190.10 125 324 1.6E-120 T 13-10-2018 Y11_38721 eee8a568d8b9e8ed7f474466758f9cd2 329 SUPERFAMILY SSF53850 23 327 9.52E-66 T 13-10-2018 Y11_38721 eee8a568d8b9e8ed7f474466758f9cd2 329 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 323 1.0E-145 T 13-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 Y11_38721 eee8a568d8b9e8ed7f474466758f9cd2 329 Gene3D G3DSA:3.40.190.10 25 299 1.6E-120 T 13-10-2018 Y11_38721 eee8a568d8b9e8ed7f474466758f9cd2 329 Pfam PF01547 Bacterial extracellular solute-binding protein 42 274 1.3E-17 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein Y11_21611 0192a0c309ff5bba7517f6efb3dc3dac 210 SUPERFAMILY SSF53639 7 201 6.08E-46 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Y11_21611 0192a0c309ff5bba7517f6efb3dc3dac 210 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 204 121.666 T 13-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 Y11_21611 0192a0c309ff5bba7517f6efb3dc3dac 210 Gene3D G3DSA:3.40.225.10 2 199 7.3E-51 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Y11_21611 0192a0c309ff5bba7517f6efb3dc3dac 210 SMART SM01007 8 196 5.4E-51 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal Y11_21611 0192a0c309ff5bba7517f6efb3dc3dac 210 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 11 199 1.9E-71 T 13-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 Y11_21611 0192a0c309ff5bba7517f6efb3dc3dac 210 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 195 1.1E-41 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal Y11_21441 2e97772873ebba44c74921d6a1ae52ac 266 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 9 257 4.6E-101 T 13-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 Y11_21441 2e97772873ebba44c74921d6a1ae52ac 266 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 10 261 36.412 T 13-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 Y11_21441 2e97772873ebba44c74921d6a1ae52ac 266 Pfam PF04205 FMN-binding domain 151 246 1.3E-15 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Y11_21441 2e97772873ebba44c74921d6a1ae52ac 266 PIRSF PIRSF009437 2 264 6.3E-102 T 13-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 Y11_21441 2e97772873ebba44c74921d6a1ae52ac 266 SMART SM00900 151 249 3.2E-34 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Y11_27441 cd69c74d0587a2954bcc24df1ec87c88 517 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 1 514 5.9E-200 T 13-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 Y11_27441 cd69c74d0587a2954bcc24df1ec87c88 517 Pfam PF00999 Sodium/hydrogen exchanger family 1 389 6.1E-77 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Y11_25241 50aa28458669ac4433b1f0bf42b528b7 202 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 141 5.5E-58 T 13-10-2018 IPR006521 Tail protein I Y11_25241 50aa28458669ac4433b1f0bf42b528b7 202 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 141 7.7E-50 T 13-10-2018 IPR006521 Tail protein I Y11_13411 50aa28458669ac4433b1f0bf42b528b7 202 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 141 5.5E-58 T 13-10-2018 IPR006521 Tail protein I Y11_13411 50aa28458669ac4433b1f0bf42b528b7 202 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 141 7.7E-50 T 13-10-2018 IPR006521 Tail protein I Y11_25871 82e778435e93a143dc4fd01e425025f4 281 Pfam PF00392 Bacterial regulatory proteins, gntR family 30 93 1.4E-22 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_25871 82e778435e93a143dc4fd01e425025f4 281 Gene3D G3DSA:1.10.10.10 24 103 2.8E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_25871 82e778435e93a143dc4fd01e425025f4 281 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 67 1.6E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_25871 82e778435e93a143dc4fd01e425025f4 281 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 67 83 1.6E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_25871 82e778435e93a143dc4fd01e425025f4 281 SUPERFAMILY SSF48008 115 248 9.94E-20 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Y11_25871 82e778435e93a143dc4fd01e425025f4 281 SMART SM00345 34 93 3.3E-25 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_25871 82e778435e93a143dc4fd01e425025f4 281 Gene3D G3DSA:1.20.120.530 116 253 3.4E-19 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Y11_25871 82e778435e93a143dc4fd01e425025f4 281 SUPERFAMILY SSF46785 22 97 1.64E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_25871 82e778435e93a143dc4fd01e425025f4 281 SMART SM00895 117 241 2.8E-14 T 13-10-2018 IPR011711 GntR, C-terminal Y11_25871 82e778435e93a143dc4fd01e425025f4 281 Pfam PF07729 FCD domain 117 240 7.7E-17 T 13-10-2018 IPR011711 GntR, C-terminal Y11_27381 5a0a331c27c192ef067c248063746fa8 392 Gene3D G3DSA:1.10.3720.10 176 388 1.5E-31 T 13-10-2018 IPR035906 MetI-like superfamily Y11_27381 5a0a331c27c192ef067c248063746fa8 392 SUPERFAMILY SSF161098 82 212 9.42E-15 T 13-10-2018 IPR035906 MetI-like superfamily Y11_27381 5a0a331c27c192ef067c248063746fa8 392 SUPERFAMILY SSF161098 180 374 4.19E-24 T 13-10-2018 IPR035906 MetI-like superfamily Y11_27381 5a0a331c27c192ef067c248063746fa8 392 Gene3D G3DSA:1.10.3720.10 77 171 1.9E-8 T 13-10-2018 IPR035906 MetI-like superfamily Y11_27381 5a0a331c27c192ef067c248063746fa8 392 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 262 387 9.4E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_27381 5a0a331c27c192ef067c248063746fa8 392 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 83 146 2.3E-17 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Y11_15191 81d02c2c1648a65da55b4e6e0387f243 246 PRINTS PR00969 Pili chaperone signature 21 30 4.6E-28 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_15191 81d02c2c1648a65da55b4e6e0387f243 246 PRINTS PR00969 Pili chaperone signature 164 179 4.6E-28 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_15191 81d02c2c1648a65da55b4e6e0387f243 246 PRINTS PR00969 Pili chaperone signature 98 115 4.6E-28 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_15191 81d02c2c1648a65da55b4e6e0387f243 246 PRINTS PR00969 Pili chaperone signature 70 91 4.6E-28 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_15191 81d02c2c1648a65da55b4e6e0387f243 246 PRINTS PR00969 Pili chaperone signature 125 140 4.6E-28 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_15191 81d02c2c1648a65da55b4e6e0387f243 246 Gene3D G3DSA:2.60.40.10 147 245 1.3E-16 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_15191 81d02c2c1648a65da55b4e6e0387f243 246 SUPERFAMILY SSF49584 137 237 9.55E-13 T 13-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily Y11_15191 81d02c2c1648a65da55b4e6e0387f243 246 Gene3D G3DSA:2.60.40.10 22 144 4.3E-41 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_15191 81d02c2c1648a65da55b4e6e0387f243 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 169 236 3.1E-11 T 13-10-2018 IPR016148 Pili assembly chaperone, C-terminal Y11_15191 81d02c2c1648a65da55b4e6e0387f243 246 SUPERFAMILY SSF49354 16 143 4.45E-40 T 13-10-2018 IPR008962 PapD-like superfamily Y11_15191 81d02c2c1648a65da55b4e6e0387f243 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 20 143 6.5E-42 T 13-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Y11_15191 81d02c2c1648a65da55b4e6e0387f243 246 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 97 114 - T 13-10-2018 IPR018046 Pili assembly chaperone, conserved site Y11_35831 7843d7ef23487af675e6318a3678d427 587 Gene3D G3DSA:2.60.40.1250 31 167 6.8E-44 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Y11_35831 7843d7ef23487af675e6318a3678d427 587 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 193 398 1.3E-20 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Y11_35831 7843d7ef23487af675e6318a3678d427 587 ProSitePatterns PS00194 Thioredoxin family active site. 494 512 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Y11_35831 7843d7ef23487af675e6318a3678d427 587 SUPERFAMILY SSF52833 473 584 2.03E-24 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_35831 7843d7ef23487af675e6318a3678d427 587 Pfam PF13899 Thioredoxin-like 484 559 4.8E-13 T 13-10-2018 Y11_35831 7843d7ef23487af675e6318a3678d427 587 SUPERFAMILY SSF74863 38 151 1.44E-40 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Y11_35831 7843d7ef23487af675e6318a3678d427 587 Gene3D G3DSA:3.40.30.10 462 585 1.2E-36 T 13-10-2018 Y11_35831 7843d7ef23487af675e6318a3678d427 587 Pfam PF11412 Disulphide bond corrector protein DsbC 39 149 8.3E-33 T 13-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Y11_35831 7843d7ef23487af675e6318a3678d427 587 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 586 40.352 T 13-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 SUPERFAMILY SSF55424 336 450 9.11E-36 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.7E-66 T 13-10-2018 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 1.7E-66 T 13-10-2018 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 1.7E-66 T 13-10-2018 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.7E-66 T 13-10-2018 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.7E-66 T 13-10-2018 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 1.7E-66 T 13-10-2018 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.7E-66 T 13-10-2018 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.7E-66 T 13-10-2018 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 1.7E-66 T 13-10-2018 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 2.9E-219 T 13-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 SUPERFAMILY SSF51905 1 364 3.5E-60 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.8E-29 T 13-10-2018 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 4.8E-29 T 13-10-2018 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 4.8E-29 T 13-10-2018 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 4.8E-29 T 13-10-2018 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 4.8E-29 T 13-10-2018 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 1.9E-34 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 Gene3D G3DSA:3.50.50.60 5 318 3.4E-125 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 PIRSF PIRSF000350 1 447 5.1E-87 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 Gene3D G3DSA:3.50.50.60 144 261 3.4E-125 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 318 1.7E-69 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 Gene3D G3DSA:3.30.390.30 338 450 4.3E-48 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Y11_31391 aece52eb9fe9dc3a2676b653cd344a45 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Y11_15721 c21c2773a2be8617cf442a0da22dba4c 843 Pfam PF13953 PapC C-terminal domain 760 817 5.4E-8 T 13-10-2018 IPR025949 PapC-like, C-terminal domain Y11_15721 c21c2773a2be8617cf442a0da22dba4c 843 Pfam PF13954 PapC N-terminal domain 13 160 1.7E-37 T 13-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 Y11_15721 c21c2773a2be8617cf442a0da22dba4c 843 Gene3D G3DSA:2.60.40.2070 758 840 4.5E-6 T 13-10-2018 Y11_15721 c21c2773a2be8617cf442a0da22dba4c 843 Gene3D G3DSA:3.10.20.410 11 138 3.8E-27 T 13-10-2018 Y11_15721 c21c2773a2be8617cf442a0da22dba4c 843 SUPERFAMILY SSF141729 11 138 1.31E-27 T 13-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 Y11_15721 c21c2773a2be8617cf442a0da22dba4c 843 Gene3D G3DSA:2.60.40.2610 662 753 1.3E-25 T 13-10-2018 Y11_15721 c21c2773a2be8617cf442a0da22dba4c 843 Gene3D G3DSA:2.60.40.3110 251 340 4.9E-31 T 13-10-2018 Y11_15721 c21c2773a2be8617cf442a0da22dba4c 843 Pfam PF00577 Outer membrane usher protein 185 745 2.4E-142 T 13-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 Y11_30901 542bbb6fdf949d0238ad880bf74f78dc 320 Gene3D G3DSA:1.10.260.40 3 59 9.1E-20 T 13-10-2018 Y11_30901 542bbb6fdf949d0238ad880bf74f78dc 320 Pfam PF13377 Periplasmic binding protein-like domain 159 316 8.1E-22 T 13-10-2018 Y11_30901 542bbb6fdf949d0238ad880bf74f78dc 320 SUPERFAMILY SSF47413 1 59 2.49E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_30901 542bbb6fdf949d0238ad880bf74f78dc 320 SUPERFAMILY SSF53822 61 317 1.05E-30 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_30901 542bbb6fdf949d0238ad880bf74f78dc 320 SMART SM00354 1 71 1.1E-24 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_30901 542bbb6fdf949d0238ad880bf74f78dc 320 Gene3D G3DSA:3.40.50.2300 62 294 1.1E-29 T 13-10-2018 Y11_30901 542bbb6fdf949d0238ad880bf74f78dc 320 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.1E-16 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_30901 542bbb6fdf949d0238ad880bf74f78dc 320 Gene3D G3DSA:3.40.50.2300 149 275 1.1E-29 T 13-10-2018 Y11_29991 bb1fcfc3e2bc68ad381149a7c5be8195 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 1.0E-107 T 13-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Y11_29991 bb1fcfc3e2bc68ad381149a7c5be8195 399 Pfam PF07055 Enoyl reductase FAD binding domain 324 387 4.0E-28 T 13-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Y11_29991 bb1fcfc3e2bc68ad381149a7c5be8195 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 2.3E-38 T 13-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Y11_29991 bb1fcfc3e2bc68ad381149a7c5be8195 399 Gene3D G3DSA:3.40.50.720 1 399 6.2E-185 T 13-10-2018 Y11_29991 bb1fcfc3e2bc68ad381149a7c5be8195 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 393 54.348 T 13-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Y11_37131 524ce7a5510216777430fd6bcfd95e90 241 Gene3D G3DSA:3.40.1410.10 84 241 1.1E-36 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Y11_37131 524ce7a5510216777430fd6bcfd95e90 241 SMART SM00866 96 236 7.1E-27 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Y11_37131 524ce7a5510216777430fd6bcfd95e90 241 SMART SM00345 17 75 7.9E-20 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_37131 524ce7a5510216777430fd6bcfd95e90 241 SUPERFAMILY SSF46785 8 82 4.12E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_37131 524ce7a5510216777430fd6bcfd95e90 241 Gene3D G3DSA:1.10.10.10 10 75 1.2E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_37131 524ce7a5510216777430fd6bcfd95e90 241 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 7 241 1.2E-85 T 13-10-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF Y11_37131 524ce7a5510216777430fd6bcfd95e90 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.4E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_37131 524ce7a5510216777430fd6bcfd95e90 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.4E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_37131 524ce7a5510216777430fd6bcfd95e90 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 2.6E-19 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_37131 524ce7a5510216777430fd6bcfd95e90 241 Pfam PF07702 UTRA domain 96 235 2.4E-29 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Y11_37131 524ce7a5510216777430fd6bcfd95e90 241 SUPERFAMILY SSF64288 63 240 2.83E-36 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Y11_12191 80c22c90b47352df1da2cfb5630b7fcb 265 Pfam PF00665 Integrase core domain 107 219 2.9E-20 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_12191 80c22c90b47352df1da2cfb5630b7fcb 265 SUPERFAMILY SSF53098 104 260 9.56E-35 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_12191 80c22c90b47352df1da2cfb5630b7fcb 265 Gene3D G3DSA:3.30.420.10 103 250 2.1E-11 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_37791 560bc33e8a510b494e93066b76725980 391 Pfam PF07690 Major Facilitator Superfamily 15 324 1.6E-13 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_37791 560bc33e8a510b494e93066b76725980 391 Gene3D G3DSA:1.20.1250.20 198 382 3.1E-18 T 13-10-2018 Y11_37791 560bc33e8a510b494e93066b76725980 391 Gene3D G3DSA:1.20.1250.20 8 191 8.1E-10 T 13-10-2018 Y11_37791 560bc33e8a510b494e93066b76725980 391 SUPERFAMILY SSF103473 8 381 1.27E-32 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_12641 d6c0e2e0eb3362dd8e35a4be0f1c4f62 363 SUPERFAMILY SSF81271 279 359 4.58E-36 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Y11_12641 d6c0e2e0eb3362dd8e35a4be0f1c4f62 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 3.8E-174 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Y11_12641 d6c0e2e0eb3362dd8e35a4be0f1c4f62 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_12641 d6c0e2e0eb3362dd8e35a4be0f1c4f62 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_12641 d6c0e2e0eb3362dd8e35a4be0f1c4f62 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_12641 d6c0e2e0eb3362dd8e35a4be0f1c4f62 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_12641 d6c0e2e0eb3362dd8e35a4be0f1c4f62 363 SUPERFAMILY SSF52540 3 301 6.95E-84 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_12641 d6c0e2e0eb3362dd8e35a4be0f1c4f62 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.697 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Y11_12641 d6c0e2e0eb3362dd8e35a4be0f1c4f62 363 PIRSF PIRSF006641 1 363 3.8E-158 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Y11_12641 d6c0e2e0eb3362dd8e35a4be0f1c4f62 363 Gene3D G3DSA:1.10.150.300 120 200 3.1E-153 T 13-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Y11_12641 d6c0e2e0eb3362dd8e35a4be0f1c4f62 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.6E-39 T 13-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Y11_12641 d6c0e2e0eb3362dd8e35a4be0f1c4f62 363 Gene3D G3DSA:3.10.20.30 48 362 3.1E-153 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Y11_12641 d6c0e2e0eb3362dd8e35a4be0f1c4f62 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 2.3E-21 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_12641 d6c0e2e0eb3362dd8e35a4be0f1c4f62 363 Gene3D G3DSA:3.40.50.300 4 278 3.1E-153 T 13-10-2018 Y11_19211 15b05c90a60cadacfc10942964918167 222 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 12 74 1.8E-13 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Y11_19211 15b05c90a60cadacfc10942964918167 222 Gene3D G3DSA:3.40.50.620 8 219 3.5E-65 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_19211 15b05c90a60cadacfc10942964918167 222 SUPERFAMILY SSF52374 11 219 8.3E-59 T 13-10-2018 Y11_19211 15b05c90a60cadacfc10942964918167 222 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 9 219 31.534 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Y11_19211 15b05c90a60cadacfc10942964918167 222 Pfam PF01467 Cytidylyltransferase-like 13 193 1.3E-33 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Y11_19211 15b05c90a60cadacfc10942964918167 222 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 13 218 1.7E-57 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Y11_02631 771c8e9f313a7fbbb8a51492cd62e785 242 SUPERFAMILY SSF53335 17 235 1.34E-44 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_02631 771c8e9f313a7fbbb8a51492cd62e785 242 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 16 240 37.65 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Y11_02631 771c8e9f313a7fbbb8a51492cd62e785 242 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 2.4E-89 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Y11_02631 771c8e9f313a7fbbb8a51492cd62e785 242 Gene3D G3DSA:3.40.50.150 16 240 6.8E-76 T 13-10-2018 Y11_02631 771c8e9f313a7fbbb8a51492cd62e785 242 Pfam PF13489 Methyltransferase domain 57 196 4.3E-25 T 13-10-2018 Y11_12931 ceb67fe0c3efddbbff8e2d6e00835356 430 Pfam PF07484 Phage Tail Collar Domain 283 330 8.9E-10 T 13-10-2018 IPR011083 Phage tail collar domain Y11_12931 ceb67fe0c3efddbbff8e2d6e00835356 430 Pfam PF12571 Phage tail-collar fibre protein 7 64 2.4E-14 T 13-10-2018 IPR022225 Phage tail fibre protein Y11_12931 ceb67fe0c3efddbbff8e2d6e00835356 430 Gene3D G3DSA:3.90.1340.10 279 331 1.8E-20 T 13-10-2018 IPR037053 Phage tail collar domain superfamily Y11_12931 ceb67fe0c3efddbbff8e2d6e00835356 430 Pfam PF03406 Phage tail fibre repeat 95 131 2.0E-11 T 13-10-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 Y11_12931 ceb67fe0c3efddbbff8e2d6e00835356 430 SUPERFAMILY SSF88874 279 429 2.27E-35 T 13-10-2018 Y11_35661 d101d46b7855a88ac8d397931be06c33 483 SUPERFAMILY SSF53383 89 465 3.99E-92 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_35661 d101d46b7855a88ac8d397931be06c33 483 Gene3D G3DSA:3.40.640.10 141 360 6.7E-99 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_35661 d101d46b7855a88ac8d397931be06c33 483 SUPERFAMILY SSF46785 1 75 2.13E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_35661 d101d46b7855a88ac8d397931be06c33 483 SMART SM00345 7 66 1.2E-19 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_35661 d101d46b7855a88ac8d397931be06c33 483 Gene3D G3DSA:3.90.1150.10 98 465 6.7E-99 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_35661 d101d46b7855a88ac8d397931be06c33 483 Gene3D G3DSA:1.10.10.10 1 67 2.8E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_35661 d101d46b7855a88ac8d397931be06c33 483 Pfam PF00155 Aminotransferase class I and II 105 461 4.9E-35 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_35661 d101d46b7855a88ac8d397931be06c33 483 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 3.3E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_04721 2e7fe8da0e0f07f7ec92816d15bba0c5 138 Gene3D G3DSA:3.40.50.720 1 138 2.7E-42 T 13-10-2018 Y11_04721 2e7fe8da0e0f07f7ec92816d15bba0c5 138 Pfam PF13380 CoA binding domain 14 130 3.4E-38 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Y11_04721 2e7fe8da0e0f07f7ec92816d15bba0c5 138 SUPERFAMILY SSF51735 2 135 9.39E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_04721 2e7fe8da0e0f07f7ec92816d15bba0c5 138 SMART SM00881 10 104 7.2E-26 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Y11_07091 d869010df86d473ffa7f2d865060791b 186 Pfam PF06185 YecM protein 10 183 2.0E-68 T 13-10-2018 IPR010393 Protein of unknown function DUF991 Y11_07091 d869010df86d473ffa7f2d865060791b 186 Gene3D G3DSA:3.10.180.10 1 186 4.9E-67 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y11_07091 d869010df86d473ffa7f2d865060791b 186 SUPERFAMILY SSF54593 5 183 1.24E-66 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y11_35161 7ef2ccc7ce8102bf6d6be6c429c73a92 437 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 4.7E-53 T 13-10-2018 Y11_35161 7ef2ccc7ce8102bf6d6be6c429c73a92 437 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 4.7E-53 T 13-10-2018 Y11_35161 7ef2ccc7ce8102bf6d6be6c429c73a92 437 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 4.7E-53 T 13-10-2018 Y11_35161 7ef2ccc7ce8102bf6d6be6c429c73a92 437 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 4.7E-53 T 13-10-2018 Y11_35161 7ef2ccc7ce8102bf6d6be6c429c73a92 437 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 4.7E-53 T 13-10-2018 Y11_35161 7ef2ccc7ce8102bf6d6be6c429c73a92 437 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 4.7E-53 T 13-10-2018 Y11_35161 7ef2ccc7ce8102bf6d6be6c429c73a92 437 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 4.7E-53 T 13-10-2018 Y11_35161 7ef2ccc7ce8102bf6d6be6c429c73a92 437 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 4.7E-53 T 13-10-2018 Y11_35161 7ef2ccc7ce8102bf6d6be6c429c73a92 437 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 1 428 45.671 T 13-10-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 Y11_35161 7ef2ccc7ce8102bf6d6be6c429c73a92 437 Gene3D G3DSA:1.10.3860.10 1 428 3.1E-137 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Y11_35161 7ef2ccc7ce8102bf6d6be6c429c73a92 437 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 7.0E-118 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Y11_35161 7ef2ccc7ce8102bf6d6be6c429c73a92 437 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 13-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site Y11_35161 7ef2ccc7ce8102bf6d6be6c429c73a92 437 SUPERFAMILY SSF118215 8 412 6.28E-124 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Y11_35161 7ef2ccc7ce8102bf6d6be6c429c73a92 437 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 13-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site Y11_16231 bc64204262c2f94cceeb76e810fc6f0a 200 Pfam PF00936 BMC domain 4 80 2.2E-20 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Y11_16231 bc64204262c2f94cceeb76e810fc6f0a 200 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 66 8.0E-15 T 13-10-2018 Y11_16231 bc64204262c2f94cceeb76e810fc6f0a 200 SUPERFAMILY SSF143414 4 91 4.32E-23 T 13-10-2018 IPR037233 CcmK-like superfamily Y11_16231 bc64204262c2f94cceeb76e810fc6f0a 200 Gene3D G3DSA:3.30.70.1710 1 111 5.0E-25 T 13-10-2018 Y11_16231 bc64204262c2f94cceeb76e810fc6f0a 200 SMART SM00877 3 80 3.5E-25 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Y11_40611 86091d9100ed809338435a535a8a47a5 404 Pfam PF07690 Major Facilitator Superfamily 19 345 7.4E-18 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_40611 86091d9100ed809338435a535a8a47a5 404 Gene3D G3DSA:1.20.1250.20 11 394 2.4E-25 T 13-10-2018 Y11_40611 86091d9100ed809338435a535a8a47a5 404 SUPERFAMILY SSF103473 14 400 1.83E-27 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_40611 86091d9100ed809338435a535a8a47a5 404 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 42.719 T 13-10-2018 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 Y11_43371 a04f98679d14f5a03e6fa51e6c1aed17 554 Gene3D G3DSA:1.10.3720.10 296 549 2.7E-31 T 13-10-2018 IPR035906 MetI-like superfamily Y11_43371 a04f98679d14f5a03e6fa51e6c1aed17 554 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 286 546 2.2E-75 T 13-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Y11_43371 a04f98679d14f5a03e6fa51e6c1aed17 554 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 322 549 1.5E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_43371 a04f98679d14f5a03e6fa51e6c1aed17 554 SUPERFAMILY SSF161098 276 537 1.83E-38 T 13-10-2018 IPR035906 MetI-like superfamily Y11_42521 04fdef9bdcb85532316749f33a3d6fe1 345 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 21 234 7.0E-101 T 13-10-2018 Y11_42521 04fdef9bdcb85532316749f33a3d6fe1 345 Pfam PF13942 YfhG lipoprotein 63 236 5.6E-78 T 13-10-2018 IPR025262 Quorum-sensing regulator protein G Y11_41561 1ccd62ec20cce75d4193e9e4a8dd4774 134 PIRSF PIRSF005087 1 134 4.7E-55 T 13-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI Y11_41561 1ccd62ec20cce75d4193e9e4a8dd4774 134 Gene3D G3DSA:3.40.50.360 3 134 6.9E-47 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_41561 1ccd62ec20cce75d4193e9e4a8dd4774 134 TIGRFAM TIGR00333 nrdI: nrdI protein 5 132 6.3E-52 T 13-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI Y11_41561 1ccd62ec20cce75d4193e9e4a8dd4774 134 SUPERFAMILY SSF52218 1 132 1.84E-23 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_41561 1ccd62ec20cce75d4193e9e4a8dd4774 134 Hamap MF_00128 Protein NrdI [nrdI]. 3 133 35.811 T 13-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial Y11_41561 1ccd62ec20cce75d4193e9e4a8dd4774 134 Pfam PF07972 NrdI Flavodoxin like 5 123 7.2E-48 T 13-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI Y11_39351 23f583b29eb591de48b618f664080cf8 764 Gene3D G3DSA:2.40.170.20 198 764 7.6E-221 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Y11_39351 23f583b29eb591de48b618f664080cf8 764 Pfam PF00593 TonB dependent receptor 284 762 2.1E-50 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Y11_39351 23f583b29eb591de48b618f664080cf8 764 SUPERFAMILY SSF56935 58 764 1.89E-129 T 13-10-2018 Y11_39351 23f583b29eb591de48b618f664080cf8 764 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 747 764 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site Y11_39351 23f583b29eb591de48b618f664080cf8 764 Gene3D G3DSA:2.170.130.10 47 192 5.7E-43 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Y11_39351 23f583b29eb591de48b618f664080cf8 764 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 75 764 2.2E-108 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 Y11_39351 23f583b29eb591de48b618f664080cf8 764 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 65 - T 13-10-2018 IPR010916 TonB box, conserved site Y11_39351 23f583b29eb591de48b618f664080cf8 764 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 187 1.2E-27 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Y11_38231 9c264020290612d762564488264082ad 110 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 11 101 6.0E-36 T 13-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 Y11_38231 9c264020290612d762564488264082ad 110 Gene3D G3DSA:1.10.1270.10 9 108 1.4E-36 T 13-10-2018 IPR038116 TrpR-like superfamily Y11_38231 9c264020290612d762564488264082ad 110 Pfam PF01371 Trp repressor protein 17 103 1.5E-28 T 13-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 Y11_38231 9c264020290612d762564488264082ad 110 SUPERFAMILY SSF48295 6 104 2.41E-28 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Y11_38231 9c264020290612d762564488264082ad 110 PIRSF PIRSF003196 7 109 1.9E-40 T 13-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 Y11_38231 9c264020290612d762564488264082ad 110 Hamap MF_00475 Trp operon repressor [trpR]. 15 108 23.448 T 13-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 Y11_38231 9c264020290612d762564488264082ad 110 TIGRFAM TIGR01321 TrpR: trp operon repressor 12 104 4.5E-35 T 13-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 Y11_36891 7ee6fa72b01f987b84b1383dca673ae9 721 SUPERFAMILY SSF55904 572 719 4.84E-45 T 13-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 Y11_36891 7ee6fa72b01f987b84b1383dca673ae9 721 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 13-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Y11_36891 7ee6fa72b01f987b84b1383dca673ae9 721 Gene3D G3DSA:3.90.100.10 601 721 9.7E-42 T 13-10-2018 Y11_36891 7ee6fa72b01f987b84b1383dca673ae9 721 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 704 6.5E-45 T 13-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 Y11_36891 7ee6fa72b01f987b84b1383dca673ae9 721 Gene3D G3DSA:3.90.1150.10 421 600 7.6E-68 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_36891 7ee6fa72b01f987b84b1383dca673ae9 721 PIRSF PIRSF009393 1 720 5.9E-291 T 13-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 Y11_36891 7ee6fa72b01f987b84b1383dca673ae9 721 SUPERFAMILY SSF52172 1 108 4.03E-33 T 13-10-2018 IPR011006 CheY-like superfamily Y11_36891 7ee6fa72b01f987b84b1383dca673ae9 721 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 549 1.7E-196 T 13-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Y11_36891 7ee6fa72b01f987b84b1383dca673ae9 721 Gene3D G3DSA:3.40.50.220 1 108 7.4E-22 T 13-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 Y11_36891 7ee6fa72b01f987b84b1383dca673ae9 721 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 719 0.0 T 13-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 Y11_36891 7ee6fa72b01f987b84b1383dca673ae9 721 Gene3D G3DSA:3.40.640.10 109 420 2.5E-86 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_36891 7ee6fa72b01f987b84b1383dca673ae9 721 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 5 103 5.0E-24 T 13-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 Y11_36891 7ee6fa72b01f987b84b1383dca673ae9 721 SUPERFAMILY SSF53383 109 566 2.64E-120 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_05531 2aba00eb115e8fd9fb604cc719a9e185 400 Pfam PF12704 MacB-like periplasmic core domain 27 209 9.9E-12 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Y11_05531 2aba00eb115e8fd9fb604cc719a9e185 400 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 400 4.3E-139 T 13-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 Y11_05531 2aba00eb115e8fd9fb604cc719a9e185 400 Pfam PF02687 FtsX-like permease family 297 393 2.5E-12 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Y11_35051 ed85b392386e68276936dcbbc93980aa 365 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 16 359 50.428 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Y11_35051 ed85b392386e68276936dcbbc93980aa 365 SUPERFAMILY SSF51726 12 363 1.12E-119 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Y11_35051 ed85b392386e68276936dcbbc93980aa 365 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 15 357 2.2E-141 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Y11_35051 ed85b392386e68276936dcbbc93980aa 365 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 32 41 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Y11_35051 ed85b392386e68276936dcbbc93980aa 365 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 19 356 8.6E-136 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Y11_35051 ed85b392386e68276936dcbbc93980aa 365 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 152 168 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Y11_35051 ed85b392386e68276936dcbbc93980aa 365 Gene3D G3DSA:3.20.20.210 11 364 9.8E-162 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Y11_28771 dc18c10fb8d8f641e44e7f9d4e0d1f3a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 9.5E-42 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Y11_28771 dc18c10fb8d8f641e44e7f9d4e0d1f3a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 9.5E-42 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Y11_28771 dc18c10fb8d8f641e44e7f9d4e0d1f3a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 9.5E-42 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Y11_28771 dc18c10fb8d8f641e44e7f9d4e0d1f3a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 9.5E-42 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Y11_28771 dc18c10fb8d8f641e44e7f9d4e0d1f3a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 9.5E-42 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Y11_28771 dc18c10fb8d8f641e44e7f9d4e0d1f3a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 9.5E-42 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Y11_28771 dc18c10fb8d8f641e44e7f9d4e0d1f3a 339 Gene3D G3DSA:3.40.50.720 1 191 6.6E-55 T 13-10-2018 Y11_28771 dc18c10fb8d8f641e44e7f9d4e0d1f3a 339 Gene3D G3DSA:1.10.1040.10 193 338 2.7E-53 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Y11_28771 dc18c10fb8d8f641e44e7f9d4e0d1f3a 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.102 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Y11_28771 dc18c10fb8d8f641e44e7f9d4e0d1f3a 339 SUPERFAMILY SSF51735 8 182 1.51E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_28771 dc18c10fb8d8f641e44e7f9d4e0d1f3a 339 SUPERFAMILY SSF48179 184 335 8.84E-58 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_28771 dc18c10fb8d8f641e44e7f9d4e0d1f3a 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Y11_28771 dc18c10fb8d8f641e44e7f9d4e0d1f3a 339 PIRSF PIRSF000114 1 336 1.4E-100 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Y11_28771 dc18c10fb8d8f641e44e7f9d4e0d1f3a 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 162 6.8E-50 T 13-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Y11_28771 dc18c10fb8d8f641e44e7f9d4e0d1f3a 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 3.7E-53 T 13-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Y11_20721 2f2e186c61f98722f4204d96685eea87 306 Pfam PF00348 Polyprenyl synthetase 39 270 2.4E-58 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Y11_20721 2f2e186c61f98722f4204d96685eea87 306 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 88 104 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site Y11_20721 2f2e186c61f98722f4204d96685eea87 306 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 222 234 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site Y11_20721 2f2e186c61f98722f4204d96685eea87 306 SUPERFAMILY SSF48576 9 285 1.24E-88 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Y11_20721 2f2e186c61f98722f4204d96685eea87 306 Gene3D G3DSA:1.10.600.10 8 306 5.2E-108 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Y11_03821 21a79915b933c5cd0aa7445da0cf978f 295 Pfam PF04072 Leucine carboxyl methyltransferase 17 196 1.8E-28 T 13-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 Y11_03821 21a79915b933c5cd0aa7445da0cf978f 295 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 13 273 2.2E-36 T 13-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 Y11_03821 21a79915b933c5cd0aa7445da0cf978f 295 SUPERFAMILY SSF53335 10 285 8.31E-43 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_03821 21a79915b933c5cd0aa7445da0cf978f 295 Gene3D G3DSA:3.40.50.150 2 278 5.9E-36 T 13-10-2018 Y11_28981 04c06eb1f93f6233dc5754fd87fdd5e2 222 TIGRFAM TIGR00608 radc: DNA repair protein RadC 10 222 6.6E-84 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 Y11_28981 04c06eb1f93f6233dc5754fd87fdd5e2 222 SUPERFAMILY SSF102712 150 188 5.49E-5 T 13-10-2018 Y11_28981 04c06eb1f93f6233dc5754fd87fdd5e2 222 Pfam PF04002 RadC-like JAB domain 102 220 1.3E-43 T 13-10-2018 IPR025657 RadC-like JAB domain Y11_28981 04c06eb1f93f6233dc5754fd87fdd5e2 222 Hamap MF_00018 UPF0758 protein YicR [yicR]. 2 222 53.11 T 13-10-2018 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily Y11_28981 04c06eb1f93f6233dc5754fd87fdd5e2 222 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 171 176 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site Y11_28981 04c06eb1f93f6233dc5754fd87fdd5e2 222 SUPERFAMILY SSF47781 16 85 2.05E-9 T 13-10-2018 IPR010994 RuvA domain 2-like Y11_28981 04c06eb1f93f6233dc5754fd87fdd5e2 222 Gene3D G3DSA:3.40.140.10 98 222 7.4E-44 T 13-10-2018 Y11_38771 8960a3e663e398e76f7b703442edca75 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 13-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Y11_38771 8960a3e663e398e76f7b703442edca75 810 Pfam PF01228 Glycine radical 688 791 2.1E-28 T 13-10-2018 IPR001150 Glycine radical domain GO:0003824 Y11_38771 8960a3e663e398e76f7b703442edca75 810 SUPERFAMILY SSF51998 7 809 1.83E-223 T 13-10-2018 Y11_38771 8960a3e663e398e76f7b703442edca75 810 Pfam PF02901 Pyruvate formate lyase-like 10 671 6.8E-210 T 13-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 Y11_38771 8960a3e663e398e76f7b703442edca75 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 8 810 0.0 T 13-10-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Y11_38771 8960a3e663e398e76f7b703442edca75 810 Gene3D G3DSA:3.20.70.20 10 810 3.0E-273 T 13-10-2018 Y11_23491 a75770977da0b318f485a36fdb5d7435 720 SUPERFAMILY SSF55904 572 719 8.11E-46 T 13-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 Y11_23491 a75770977da0b318f485a36fdb5d7435 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 13-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Y11_23491 a75770977da0b318f485a36fdb5d7435 720 SUPERFAMILY SSF53383 109 567 6.22E-118 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_23491 a75770977da0b318f485a36fdb5d7435 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 2.7E-20 T 13-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 Y11_23491 a75770977da0b318f485a36fdb5d7435 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 705 1.4E-48 T 13-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 Y11_23491 a75770977da0b318f485a36fdb5d7435 720 PIRSF PIRSF009393 1 720 8.6E-291 T 13-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 Y11_23491 a75770977da0b318f485a36fdb5d7435 720 Gene3D G3DSA:3.40.640.10 109 420 5.9E-86 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_23491 a75770977da0b318f485a36fdb5d7435 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 548 4.8E-195 T 13-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Y11_23491 a75770977da0b318f485a36fdb5d7435 720 Gene3D G3DSA:3.40.50.220 1 108 1.4E-22 T 13-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 Y11_23491 a75770977da0b318f485a36fdb5d7435 720 Gene3D G3DSA:3.90.100.10 601 720 3.9E-41 T 13-10-2018 Y11_23491 a75770977da0b318f485a36fdb5d7435 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 718 0.0 T 13-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 Y11_23491 a75770977da0b318f485a36fdb5d7435 720 SUPERFAMILY SSF52172 1 108 2.88E-30 T 13-10-2018 IPR011006 CheY-like superfamily Y11_23491 a75770977da0b318f485a36fdb5d7435 720 Gene3D G3DSA:3.90.1150.10 421 600 1.8E-71 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_34101 79adf12deb8a83c77112fa1ae1841bd4 451 Pfam PF07690 Major Facilitator Superfamily 34 400 9.1E-45 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_34101 79adf12deb8a83c77112fa1ae1841bd4 451 Gene3D G3DSA:1.20.1250.20 240 450 4.3E-63 T 13-10-2018 Y11_34101 79adf12deb8a83c77112fa1ae1841bd4 451 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 4.1E-261 T 13-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 Y11_34101 79adf12deb8a83c77112fa1ae1841bd4 451 Gene3D G3DSA:1.20.1250.20 18 226 7.1E-58 T 13-10-2018 Y11_34101 79adf12deb8a83c77112fa1ae1841bd4 451 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 3.8E-164 T 13-10-2018 Y11_34101 79adf12deb8a83c77112fa1ae1841bd4 451 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 13-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 Y11_34101 79adf12deb8a83c77112fa1ae1841bd4 451 PIRSF PIRSF002808 5 451 1.4E-172 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 Y11_34101 79adf12deb8a83c77112fa1ae1841bd4 451 SUPERFAMILY SSF103473 13 442 1.44E-83 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_34521 ba23329561aa73d889d7d64fdab2f34d 758 Gene3D G3DSA:3.20.20.210 387 754 0.0 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Y11_34521 ba23329561aa73d889d7d64fdab2f34d 758 PIRSF PIRSF000382 2 758 0.0 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Y11_34521 ba23329561aa73d889d7d64fdab2f34d 758 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 313 3.7E-126 T 13-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Y11_34521 ba23329561aa73d889d7d64fdab2f34d 758 Gene3D G3DSA:3.20.20.210 7 522 0.0 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Y11_34521 ba23329561aa73d889d7d64fdab2f34d 758 SUPERFAMILY SSF51726 394 756 6.54E-118 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Y11_34521 ba23329561aa73d889d7d64fdab2f34d 758 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 756 37.479 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Y11_34521 ba23329561aa73d889d7d64fdab2f34d 758 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 429 751 1.5E-159 T 13-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Y11_34521 ba23329561aa73d889d7d64fdab2f34d 758 SUPERFAMILY SSF51726 5 392 3.14E-113 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Y11_34521 ba23329561aa73d889d7d64fdab2f34d 758 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 756 0.0 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Y11_13361 13dc8520d79dee5a551e9df37fd7a7ce 105 Gene3D G3DSA:1.10.260.40 1 101 8.7E-15 T 13-10-2018 Y11_13361 13dc8520d79dee5a551e9df37fd7a7ce 105 SMART SM00530 5 60 1.7E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_13361 13dc8520d79dee5a551e9df37fd7a7ce 105 Pfam PF01381 Helix-turn-helix 6 58 6.1E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_13361 13dc8520d79dee5a551e9df37fd7a7ce 105 SUPERFAMILY SSF47413 2 65 4.56E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_25291 13dc8520d79dee5a551e9df37fd7a7ce 105 Gene3D G3DSA:1.10.260.40 1 101 8.7E-15 T 13-10-2018 Y11_25291 13dc8520d79dee5a551e9df37fd7a7ce 105 SMART SM00530 5 60 1.7E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_25291 13dc8520d79dee5a551e9df37fd7a7ce 105 Pfam PF01381 Helix-turn-helix 6 58 6.1E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_25291 13dc8520d79dee5a551e9df37fd7a7ce 105 SUPERFAMILY SSF47413 2 65 4.56E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1296 21.435 T 13-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 SUPERFAMILY SSF56042 430 614 1.21E-53 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 SUPERFAMILY SSF55326 220 427 4.88E-65 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 Gene3D G3DSA:3.90.650.10 808 981 5.4E-26 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 Gene3D G3DSA:1.10.8.750 152 212 7.2E-28 T 13-10-2018 Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1294 0.0 T 13-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 SMART SM01211 1040 1295 7.1E-160 T 13-10-2018 Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 SUPERFAMILY SSF52317 1036 1294 4.38E-98 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 SUPERFAMILY SSF56042 822 1034 2.69E-54 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 Gene3D G3DSA:3.40.50.880 982 1296 7.7E-141 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 Gene3D G3DSA:3.30.1330.10 213 418 7.6E-43 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 965 4.0E-12 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 431 587 6.9E-28 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 SUPERFAMILY SSF82697 1 151 6.28E-52 T 13-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 Gene3D G3DSA:3.90.650.10 419 605 2.5E-58 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 SUPERFAMILY SSF55326 618 815 1.12E-66 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 SUPERFAMILY SSF109736 154 219 5.49E-21 T 13-10-2018 Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 Gene3D G3DSA:3.30.1330.10 613 807 1.3E-24 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Y11_42491 c5dd479f0f8081eb574d6a5c7e889cd1 1296 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1040 1293 6.5E-106 T 13-10-2018 Y11_10061 95e39ce33f36c8177abd9847aeb88bc3 310 Pfam PF12833 Helix-turn-helix domain 205 284 7.7E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_10061 95e39ce33f36c8177abd9847aeb88bc3 310 Gene3D G3DSA:1.10.10.60 178 288 3.5E-27 T 13-10-2018 Y11_10061 95e39ce33f36c8177abd9847aeb88bc3 310 SUPERFAMILY SSF46689 182 232 7.79E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_10061 95e39ce33f36c8177abd9847aeb88bc3 310 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 236 278 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Y11_10061 95e39ce33f36c8177abd9847aeb88bc3 310 SUPERFAMILY SSF46689 236 286 1.61E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_10061 95e39ce33f36c8177abd9847aeb88bc3 310 Gene3D G3DSA:2.60.120.280 12 174 8.5E-58 T 13-10-2018 Y11_10061 95e39ce33f36c8177abd9847aeb88bc3 310 Pfam PF02311 AraC-like ligand binding domain 27 162 4.1E-22 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Y11_10061 95e39ce33f36c8177abd9847aeb88bc3 310 SUPERFAMILY SSF51215 12 168 4.45E-29 T 13-10-2018 IPR037923 Transcription regulator HTH-like Y11_10061 95e39ce33f36c8177abd9847aeb88bc3 310 SMART SM00342 199 282 5.0E-31 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_10061 95e39ce33f36c8177abd9847aeb88bc3 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 266 5.7E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_10061 95e39ce33f36c8177abd9847aeb88bc3 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 282 5.7E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_03421 89681fde9ffdb7dd316e7b44551500ae 657 Pfam PF00593 TonB dependent receptor 219 655 3.4E-58 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Y11_03421 89681fde9ffdb7dd316e7b44551500ae 657 Gene3D G3DSA:2.170.130.10 31 160 1.4E-40 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Y11_03421 89681fde9ffdb7dd316e7b44551500ae 657 Gene3D G3DSA:2.40.170.20 166 657 1.9E-140 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Y11_03421 89681fde9ffdb7dd316e7b44551500ae 657 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 155 2.1E-28 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Y11_03421 89681fde9ffdb7dd316e7b44551500ae 657 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 39 - T 13-10-2018 IPR010916 TonB box, conserved site Y11_03421 89681fde9ffdb7dd316e7b44551500ae 657 SUPERFAMILY SSF56935 22 657 9.89E-128 T 13-10-2018 Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 SMART SM00634 538 623 3.2E-11 T 13-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 SMART SM00634 640 726 5.7E-16 T 13-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 SMART SM00634 732 827 0.012 T 13-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 Gene3D G3DSA:2.60.40.10 732 834 1.1E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 Gene3D G3DSA:2.60.40.10 530 627 1.2E-17 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 Gene3D G3DSA:2.60.40.10 634 729 1.2E-20 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 Pfam PF11924 Inverse autotransporter, beta-domain 27 300 2.0E-99 T 13-10-2018 IPR024519 Inverse autotransporter, beta-domain Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 SUPERFAMILY SSF49373 849 928 2.07E-21 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 PRINTS PR01369 Intimin signature 335 347 1.2E-10 T 13-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 PRINTS PR01369 Intimin signature 152 167 1.2E-10 T 13-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 PRINTS PR01369 Intimin signature 180 199 1.2E-10 T 13-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 PRINTS PR01369 Intimin signature 248 267 1.2E-10 T 13-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 SUPERFAMILY SSF49373 409 524 4.45E-11 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 Gene3D G3DSA:2.40.160.160 63 307 6.9E-100 T 13-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 Gene3D G3DSA:2.60.40.1080 843 929 7.0E-20 T 13-10-2018 Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 SUPERFAMILY SSF49373 538 628 3.53E-18 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 SUPERFAMILY SSF49373 727 819 4.71E-10 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 Gene3D G3DSA:2.60.40.10 407 528 6.0E-17 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 SUPERFAMILY SSF49373 642 730 3.53E-20 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 Pfam PF09134 Invasin, domain 3 410 528 2.1E-15 T 13-10-2018 IPR015217 Invasin, domain 3 Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 Pfam PF02369 Bacterial Ig-like domain (group 1) 539 623 1.1E-12 T 13-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Y11_38661 f0c29cf3649e3324412ef78c4a64fba9 1024 Pfam PF02369 Bacterial Ig-like domain (group 1) 638 722 3.1E-14 T 13-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Y11_35671 ffdb6bd0be4587fb4cea2a1982deb17b 261 SMART SM00382 31 220 2.3E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_35671 ffdb6bd0be4587fb4cea2a1982deb17b 261 Pfam PF00005 ABC transporter 23 171 2.1E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_35671 ffdb6bd0be4587fb4cea2a1982deb17b 261 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_35671 ffdb6bd0be4587fb4cea2a1982deb17b 261 SUPERFAMILY SSF52540 5 237 1.55E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_35671 ffdb6bd0be4587fb4cea2a1982deb17b 261 Gene3D G3DSA:3.40.50.300 1 261 4.8E-78 T 13-10-2018 Y11_32581 41f83b053ac0d716f2b224a1decb55a3 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Y11_32581 41f83b053ac0d716f2b224a1decb55a3 289 SUPERFAMILY SSF52540 4 286 2.34E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_32581 41f83b053ac0d716f2b224a1decb55a3 289 Gene3D G3DSA:3.40.50.300 1 289 1.5E-114 T 13-10-2018 Y11_32581 41f83b053ac0d716f2b224a1decb55a3 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 6.0E-29 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Y11_32581 41f83b053ac0d716f2b224a1decb55a3 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 6.0E-29 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Y11_32581 41f83b053ac0d716f2b224a1decb55a3 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 6.0E-29 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Y11_32581 41f83b053ac0d716f2b224a1decb55a3 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 6.0E-29 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Y11_32581 41f83b053ac0d716f2b224a1decb55a3 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 7.5E-74 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Y11_26861 37893fd607814aab23842001e44910ab 181 Gene3D G3DSA:1.10.60.30 35 109 9.0E-22 T 13-10-2018 Y11_26861 37893fd607814aab23842001e44910ab 181 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 15 179 24.278 T 13-10-2018 IPR006839 Ribosome-associated, YjgA Y11_26861 37893fd607814aab23842001e44910ab 181 Pfam PF04751 Protein of unknown function (DUF615) 25 175 3.9E-57 T 13-10-2018 IPR006839 Ribosome-associated, YjgA Y11_26861 37893fd607814aab23842001e44910ab 181 PIRSF PIRSF016183 10 181 2.9E-73 T 13-10-2018 IPR006839 Ribosome-associated, YjgA Y11_26861 37893fd607814aab23842001e44910ab 181 SUPERFAMILY SSF158710 36 179 1.15E-52 T 13-10-2018 IPR023153 PSPTO4464-like domain superfamily Y11_26861 37893fd607814aab23842001e44910ab 181 Gene3D G3DSA:1.10.60.30 111 181 6.8E-29 T 13-10-2018 Y11_31881 abd221891acf43d5e12f03cc18dbdc18 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Y11_31881 abd221891acf43d5e12f03cc18dbdc18 815 SUPERFAMILY SSF53756 12 814 0.0 T 13-10-2018 Y11_31881 abd221891acf43d5e12f03cc18dbdc18 815 PIRSF PIRSF000460 2 815 1.2E-230 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Y11_31881 abd221891acf43d5e12f03cc18dbdc18 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 13-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Y11_31881 abd221891acf43d5e12f03cc18dbdc18 815 Gene3D G3DSA:3.40.50.2000 472 795 1.7E-147 T 13-10-2018 Y11_31881 abd221891acf43d5e12f03cc18dbdc18 815 Gene3D G3DSA:3.40.50.2000 6 471 1.6E-205 T 13-10-2018 Y11_31881 abd221891acf43d5e12f03cc18dbdc18 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 13-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Y11_18001 9748a4d049a6ac86d73c76bab55579e2 236 Pfam PF09209 Domain of unknown function (DUF1956) 106 230 4.9E-32 T 13-10-2018 IPR015292 Transcription regulator YbiH, C-terminal Y11_18001 9748a4d049a6ac86d73c76bab55579e2 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 4.5E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Y11_18001 9748a4d049a6ac86d73c76bab55579e2 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 4.5E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Y11_18001 9748a4d049a6ac86d73c76bab55579e2 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 4.1E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Y11_18001 9748a4d049a6ac86d73c76bab55579e2 236 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 68 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Y11_18001 9748a4d049a6ac86d73c76bab55579e2 236 SUPERFAMILY SSF48498 102 231 6.67E-33 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Y11_18001 9748a4d049a6ac86d73c76bab55579e2 236 Gene3D G3DSA:1.10.10.60 12 72 8.7E-26 T 13-10-2018 Y11_18001 9748a4d049a6ac86d73c76bab55579e2 236 SUPERFAMILY SSF46689 14 92 1.18E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_18001 9748a4d049a6ac86d73c76bab55579e2 236 Gene3D G3DSA:1.10.357.10 73 236 1.8E-47 T 13-10-2018 Y11_16191 916dc56e54339af14c0fe40b1026f044 174 Pfam PF02287 Dehydratase small subunit 40 171 6.1E-59 T 13-10-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 Y11_16191 916dc56e54339af14c0fe40b1026f044 174 Gene3D G3DSA:1.10.1510.20 82 174 1.9E-40 T 13-10-2018 IPR036091 Propanediol/glycerol dehydratase, small subunit superfamily KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 Y11_16191 916dc56e54339af14c0fe40b1026f044 174 SUPERFAMILY SSF47148 40 174 1.31E-59 T 13-10-2018 IPR036091 Propanediol/glycerol dehydratase, small subunit superfamily KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 Y11_16191 916dc56e54339af14c0fe40b1026f044 174 PIRSF PIRSF018505 1 174 5.2E-72 T 13-10-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 Y11_31891 29b42d5686a59738c0cb29acc2b53fda 504 SUPERFAMILY SSF51905 1 375 1.81E-35 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_31891 29b42d5686a59738c0cb29acc2b53fda 504 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_31891 29b42d5686a59738c0cb29acc2b53fda 504 Gene3D G3DSA:3.30.9.10 82 320 7.9E-146 T 13-10-2018 Y11_31891 29b42d5686a59738c0cb29acc2b53fda 504 Gene3D G3DSA:1.10.8.870 391 460 1.3E-27 T 13-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_31891 29b42d5686a59738c0cb29acc2b53fda 504 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 486 4.8E-12 T 13-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_31891 29b42d5686a59738c0cb29acc2b53fda 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 4.8E-28 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_31891 29b42d5686a59738c0cb29acc2b53fda 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 4.8E-28 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_31891 29b42d5686a59738c0cb29acc2b53fda 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 4.8E-28 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_31891 29b42d5686a59738c0cb29acc2b53fda 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 4.8E-28 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_31891 29b42d5686a59738c0cb29acc2b53fda 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.8E-28 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_31891 29b42d5686a59738c0cb29acc2b53fda 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 4.8E-28 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_31891 29b42d5686a59738c0cb29acc2b53fda 504 SUPERFAMILY SSF54373 226 319 4.32E-8 T 13-10-2018 Y11_31891 29b42d5686a59738c0cb29acc2b53fda 504 Pfam PF01266 FAD dependent oxidoreductase 5 323 6.0E-50 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Y11_31891 29b42d5686a59738c0cb29acc2b53fda 504 Gene3D G3DSA:3.50.50.60 5 366 7.9E-146 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_31891 29b42d5686a59738c0cb29acc2b53fda 504 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Y11_13591 9fb72843321f26e3a6020510cf7ebd1c 499 Gene3D G3DSA:2.40.30.140 104 209 5.2E-147 T 13-10-2018 Y11_13591 9fb72843321f26e3a6020510cf7ebd1c 499 SUPERFAMILY SSF51445 6 404 3.6E-94 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_13591 9fb72843321f26e3a6020510cf7ebd1c 499 Pfam PF00128 Alpha amylase, catalytic domain 22 369 8.3E-27 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Y11_13591 9fb72843321f26e3a6020510cf7ebd1c 499 PIRSF PIRSF001021 1 494 1.0E-201 T 13-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 Y11_13591 9fb72843321f26e3a6020510cf7ebd1c 499 SUPERFAMILY SSF51011 405 491 6.56E-28 T 13-10-2018 Y11_13591 9fb72843321f26e3a6020510cf7ebd1c 499 SMART SM00642 4 402 7.6E-55 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Y11_13591 9fb72843321f26e3a6020510cf7ebd1c 499 Gene3D G3DSA:3.20.20.80 5 374 5.2E-147 T 13-10-2018 Y11_13591 9fb72843321f26e3a6020510cf7ebd1c 499 Gene3D G3DSA:2.60.40.1180 408 492 9.9E-26 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta Y11_41001 a3830d73a39c91b2df74e4b91e80c4f8 892 SMART SM00471 466 613 2.3E-11 T 13-10-2018 IPR003607 HD/PDEase domain Y11_41001 a3830d73a39c91b2df74e4b91e80c4f8 892 SUPERFAMILY SSF109604 459 560 1.6E-13 T 13-10-2018 Y11_41001 a3830d73a39c91b2df74e4b91e80c4f8 892 SUPERFAMILY SSF81891 431 650 4.32E-9 T 13-10-2018 Y11_41001 a3830d73a39c91b2df74e4b91e80c4f8 892 SUPERFAMILY SSF81301 12 191 3.82E-24 T 13-10-2018 Y11_41001 a3830d73a39c91b2df74e4b91e80c4f8 892 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 892 342.408 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Y11_41001 a3830d73a39c91b2df74e4b91e80c4f8 892 Pfam PF01842 ACT domain 817 871 2.1E-8 T 13-10-2018 IPR002912 ACT domain Y11_41001 a3830d73a39c91b2df74e4b91e80c4f8 892 Pfam PF08335 GlnD PII-uridylyltransferase 195 333 9.0E-37 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Y11_41001 a3830d73a39c91b2df74e4b91e80c4f8 892 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 56 886 4.3E-302 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Y11_41001 a3830d73a39c91b2df74e4b91e80c4f8 892 SUPERFAMILY SSF55021 707 761 6.49E-10 T 13-10-2018 Y11_41001 a3830d73a39c91b2df74e4b91e80c4f8 892 Pfam PF01909 Nucleotidyltransferase domain 88 126 1.7E-6 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Y11_41001 a3830d73a39c91b2df74e4b91e80c4f8 892 Pfam PF01966 HD domain 470 603 5.4E-14 T 13-10-2018 IPR006674 HD domain Y11_41001 a3830d73a39c91b2df74e4b91e80c4f8 892 SUPERFAMILY SSF81593 211 330 1.18E-10 T 13-10-2018 Y11_41001 a3830d73a39c91b2df74e4b91e80c4f8 892 SUPERFAMILY SSF55021 815 884 4.2E-10 T 13-10-2018 Y11_41001 a3830d73a39c91b2df74e4b91e80c4f8 892 PIRSF PIRSF006288 24 892 0.0 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Y11_41001 a3830d73a39c91b2df74e4b91e80c4f8 892 Gene3D G3DSA:1.10.3210.10 460 573 1.4E-7 T 13-10-2018 Y11_16881 b97e8ad277900c0ef15a808319d1f95d 616 SUPERFAMILY SSF47323 331 487 4.36E-44 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_16881 b97e8ad277900c0ef15a808319d1f95d 616 PRINTS PR01041 Methionyl-tRNA synthetase signature 325 336 9.4E-15 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Y11_16881 b97e8ad277900c0ef15a808319d1f95d 616 PRINTS PR01041 Methionyl-tRNA synthetase signature 31 42 9.4E-15 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Y11_16881 b97e8ad277900c0ef15a808319d1f95d 616 PRINTS PR01041 Methionyl-tRNA synthetase signature 192 203 9.4E-15 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Y11_16881 b97e8ad277900c0ef15a808319d1f95d 616 PRINTS PR01041 Methionyl-tRNA synthetase signature 232 247 9.4E-15 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Y11_16881 b97e8ad277900c0ef15a808319d1f95d 616 Pfam PF01588 Putative tRNA binding domain 520 613 1.3E-21 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Y11_16881 b97e8ad277900c0ef15a808319d1f95d 616 SUPERFAMILY SSF52374 2 328 1.04E-75 T 13-10-2018 Y11_16881 b97e8ad277900c0ef15a808319d1f95d 616 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 2 476 2.0E-168 T 13-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Y11_16881 b97e8ad277900c0ef15a808319d1f95d 616 Gene3D G3DSA:2.20.28.20 83 117 1.2E-131 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Y11_16881 b97e8ad277900c0ef15a808319d1f95d 616 Gene3D G3DSA:2.40.50.140 504 616 8.2E-29 T 13-10-2018 Y11_16881 b97e8ad277900c0ef15a808319d1f95d 616 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 479 616 6.5E-45 T 13-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Y11_16881 b97e8ad277900c0ef15a808319d1f95d 616 SUPERFAMILY SSF57770 83 117 7.32E-13 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Y11_16881 b97e8ad277900c0ef15a808319d1f95d 616 Gene3D G3DSA:3.40.50.620 2 325 1.2E-131 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_16881 b97e8ad277900c0ef15a808319d1f95d 616 SUPERFAMILY SSF50249 509 615 7.1E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_16881 b97e8ad277900c0ef15a808319d1f95d 616 Pfam PF09334 tRNA synthetases class I (M) 1 337 8.8E-132 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_16881 b97e8ad277900c0ef15a808319d1f95d 616 Gene3D G3DSA:1.10.730.10 330 467 2.0E-33 T 13-10-2018 Y11_24321 998cdcec3e880226c61ec5d317e0352d 219 Gene3D G3DSA:2.30.30.910 93 214 9.0E-19 T 13-10-2018 Y11_24321 998cdcec3e880226c61ec5d317e0352d 219 Pfam PF13860 FlgD Ig-like domain 105 175 4.0E-10 T 13-10-2018 IPR025965 FlgD Ig-like domain Y11_24321 998cdcec3e880226c61ec5d317e0352d 219 Gene3D G3DSA:2.60.40.4070 103 182 9.0E-19 T 13-10-2018 Y11_24321 998cdcec3e880226c61ec5d317e0352d 219 Pfam PF03963 Flagellar hook capping protein - N-terminal region 23 78 1.1E-18 T 13-10-2018 IPR005648 Flagellar hook capping protein Y11_24321 998cdcec3e880226c61ec5d317e0352d 219 Pfam PF13861 FlgD Tudor-like domain 87 215 1.0E-9 T 13-10-2018 IPR025963 FlgD Tudor-like domain Y11_31251 ed1761440bfba0aaa964d626b042675d 511 SUPERFAMILY SSF141868 262 504 2.22E-76 T 13-10-2018 IPR035919 EAL domain superfamily Y11_31251 ed1761440bfba0aaa964d626b042675d 511 Pfam PF00563 EAL domain 263 497 3.2E-63 T 13-10-2018 IPR001633 EAL domain Y11_31251 ed1761440bfba0aaa964d626b042675d 511 SMART SM00052 257 502 6.1E-96 T 13-10-2018 IPR001633 EAL domain Y11_31251 ed1761440bfba0aaa964d626b042675d 511 Gene3D G3DSA:3.20.20.450 258 509 3.7E-83 T 13-10-2018 IPR035919 EAL domain superfamily Y11_31251 ed1761440bfba0aaa964d626b042675d 511 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 38 158 1.1E-57 T 13-10-2018 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 Y11_39031 7d3a70e670f008dcc21dcb93b7fc0dd6 444 Gene3D G3DSA:3.40.1190.10 94 305 1.1E-79 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Y11_39031 7d3a70e670f008dcc21dcb93b7fc0dd6 444 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 441 4.6E-126 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Y11_39031 7d3a70e670f008dcc21dcb93b7fc0dd6 444 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 443 34.877 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Y11_39031 7d3a70e670f008dcc21dcb93b7fc0dd6 444 SUPERFAMILY SSF53623 95 303 1.7E-55 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Y11_39031 7d3a70e670f008dcc21dcb93b7fc0dd6 444 SUPERFAMILY SSF53244 305 443 1.19E-50 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Y11_39031 7d3a70e670f008dcc21dcb93b7fc0dd6 444 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 363 4.1E-8 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Y11_39031 7d3a70e670f008dcc21dcb93b7fc0dd6 444 Pfam PF08245 Mur ligase middle domain 110 286 6.0E-28 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Y11_39031 7d3a70e670f008dcc21dcb93b7fc0dd6 444 Gene3D G3DSA:3.90.190.20 306 440 6.4E-45 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Y11_39031 7d3a70e670f008dcc21dcb93b7fc0dd6 444 Gene3D G3DSA:3.40.50.720 2 93 7.2E-26 T 13-10-2018 Y11_39031 7d3a70e670f008dcc21dcb93b7fc0dd6 444 SUPERFAMILY SSF51984 3 94 6.93E-25 T 13-10-2018 Y11_40741 bd1bf893f677a6274bb5b230d4afdb7d 1123 SUPERFAMILY SSF52540 1 347 5.84E-126 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_40741 bd1bf893f677a6274bb5b230d4afdb7d 1123 SUPERFAMILY SSF52980 819 1121 3.43E-97 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Y11_40741 bd1bf893f677a6274bb5b230d4afdb7d 1123 Gene3D G3DSA:1.10.486.10 456 664 2.9E-201 T 13-10-2018 Y11_40741 bd1bf893f677a6274bb5b230d4afdb7d 1123 Gene3D G3DSA:1.10.10.990 865 936 1.3E-27 T 13-10-2018 Y11_40741 bd1bf893f677a6274bb5b230d4afdb7d 1123 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 807 2.4E-299 T 13-10-2018 Y11_40741 bd1bf893f677a6274bb5b230d4afdb7d 1123 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1123 21.065 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Y11_40741 bd1bf893f677a6274bb5b230d4afdb7d 1123 Gene3D G3DSA:3.40.50.10930 4 315 2.8E-129 T 13-10-2018 Y11_40741 bd1bf893f677a6274bb5b230d4afdb7d 1123 PIRSF PIRSF000980 1 1123 0.0 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Y11_40741 bd1bf893f677a6274bb5b230d4afdb7d 1123 SUPERFAMILY SSF52540 370 811 1.7E-105 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_40741 bd1bf893f677a6274bb5b230d4afdb7d 1123 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1088 0.0 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Y11_40741 bd1bf893f677a6274bb5b230d4afdb7d 1123 Gene3D G3DSA:1.10.10.160 79 187 2.8E-129 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily Y11_40741 bd1bf893f677a6274bb5b230d4afdb7d 1123 Gene3D G3DSA:3.40.50.300 334 809 2.9E-201 T 13-10-2018 Y11_22081 1c9384659d1c6ef618d647fa0bf8b2c9 453 Gene3D G3DSA:1.20.120.140 4 305 3.4E-124 T 13-10-2018 Y11_22081 1c9384659d1c6ef618d647fa0bf8b2c9 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.899 T 13-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Y11_22081 1c9384659d1c6ef618d647fa0bf8b2c9 453 SUPERFAMILY SSF52540 42 354 1.24E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_22081 1c9384659d1c6ef618d647fa0bf8b2c9 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Y11_22081 1c9384659d1c6ef618d647fa0bf8b2c9 453 SUPERFAMILY SSF47446 298 431 6.02E-46 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Y11_22081 1c9384659d1c6ef618d647fa0bf8b2c9 453 Gene3D G3DSA:1.10.260.30 328 450 1.4E-45 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Y11_22081 1c9384659d1c6ef618d647fa0bf8b2c9 453 SMART SM00962 100 296 2.2E-117 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Y11_22081 1c9384659d1c6ef618d647fa0bf8b2c9 453 Pfam PF02978 Signal peptide binding domain 329 427 1.0E-32 T 13-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Y11_22081 1c9384659d1c6ef618d647fa0bf8b2c9 453 SMART SM00382 99 247 6.0E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_22081 1c9384659d1c6ef618d647fa0bf8b2c9 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.6E-75 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Y11_22081 1c9384659d1c6ef618d647fa0bf8b2c9 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.1E-179 T 13-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Y11_22081 1c9384659d1c6ef618d647fa0bf8b2c9 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.7E-23 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Y11_22081 1c9384659d1c6ef618d647fa0bf8b2c9 453 Gene3D G3DSA:3.40.50.300 90 285 3.4E-124 T 13-10-2018 Y11_22081 1c9384659d1c6ef618d647fa0bf8b2c9 453 SMART SM00963 1 86 1.5E-37 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Y11_17621 c9834b561247e35c62a43a0cbf456b8a 234 ProSitePatterns PS00221 MIP family signature. 60 68 - T 13-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 Y11_17621 c9834b561247e35c62a43a0cbf456b8a 234 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 221 2.5E-57 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_17621 c9834b561247e35c62a43a0cbf456b8a 234 Pfam PF00230 Major intrinsic protein 2 221 1.0E-47 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_17621 c9834b561247e35c62a43a0cbf456b8a 234 PRINTS PR00783 Major intrinsic protein family signature 165 187 2.8E-53 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_17621 c9834b561247e35c62a43a0cbf456b8a 234 PRINTS PR00783 Major intrinsic protein family signature 135 153 2.8E-53 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_17621 c9834b561247e35c62a43a0cbf456b8a 234 PRINTS PR00783 Major intrinsic protein family signature 2 21 2.8E-53 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_17621 c9834b561247e35c62a43a0cbf456b8a 234 PRINTS PR00783 Major intrinsic protein family signature 42 66 2.8E-53 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_17621 c9834b561247e35c62a43a0cbf456b8a 234 PRINTS PR00783 Major intrinsic protein family signature 79 98 2.8E-53 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_17621 c9834b561247e35c62a43a0cbf456b8a 234 PRINTS PR00783 Major intrinsic protein family signature 204 224 2.8E-53 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_17621 c9834b561247e35c62a43a0cbf456b8a 234 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 228 33.411 T 13-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 Y11_17621 c9834b561247e35c62a43a0cbf456b8a 234 Gene3D G3DSA:1.20.1080.10 1 227 9.3E-81 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Y11_17621 c9834b561247e35c62a43a0cbf456b8a 234 SUPERFAMILY SSF81338 1 227 4.84E-66 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Y11_34871 dccd70da4f311673ad96ca95f945a934 394 SUPERFAMILY SSF50447 205 301 4.71E-31 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Y11_34871 dccd70da4f311673ad96ca95f945a934 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.1E-58 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_34871 dccd70da4f311673ad96ca95f945a934 394 Gene3D G3DSA:3.40.50.300 1 203 1.3E-69 T 13-10-2018 Y11_34871 dccd70da4f311673ad96ca95f945a934 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.7E-33 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Y11_34871 dccd70da4f311673ad96ca95f945a934 394 SUPERFAMILY SSF50465 298 393 2.42E-35 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Y11_34871 dccd70da4f311673ad96ca95f945a934 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.4E-17 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Y11_34871 dccd70da4f311673ad96ca95f945a934 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 7.6E-238 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Y11_34871 dccd70da4f311673ad96ca95f945a934 394 SUPERFAMILY SSF52540 6 219 1.69E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_34871 dccd70da4f311673ad96ca95f945a934 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 145 3.4E-14 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Y11_34871 dccd70da4f311673ad96ca95f945a934 394 Gene3D G3DSA:2.40.30.10 206 334 1.7E-53 T 13-10-2018 Y11_34871 dccd70da4f311673ad96ca95f945a934 394 Gene3D G3DSA:2.40.30.10 338 393 1.9E-28 T 13-10-2018 Y11_34871 dccd70da4f311673ad96ca95f945a934 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.074 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Y11_34871 dccd70da4f311673ad96ca95f945a934 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.0E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_34871 dccd70da4f311673ad96ca95f945a934 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.0E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_34871 dccd70da4f311673ad96ca95f945a934 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.0E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_34871 dccd70da4f311673ad96ca95f945a934 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.0E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_34871 dccd70da4f311673ad96ca95f945a934 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.0E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_34871 dccd70da4f311673ad96ca95f945a934 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Y11_04151 1a8a786caf3e626f7be47ae1e7d28754 122 Gene3D G3DSA:3.40.50.1170 23 105 5.6E-23 T 13-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 Y11_04151 1a8a786caf3e626f7be47ae1e7d28754 122 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 13-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 Y11_04151 1a8a786caf3e626f7be47ae1e7d28754 122 Pfam PF00710 Asparaginase, N-terminal 25 95 2.6E-12 T 13-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 Y11_04151 1a8a786caf3e626f7be47ae1e7d28754 122 SUPERFAMILY SSF53774 21 97 6.54E-17 T 13-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 Pfam PF00694 Aconitase C-terminal domain 682 809 3.0E-49 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 SUPERFAMILY SSF52016 621 880 1.69E-90 T 13-10-2018 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 SUPERFAMILY SSF53732 5 617 1.06E-221 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 Pfam PF00330 Aconitase family (aconitate hydratase) 60 553 4.6E-184 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 ProSitePatterns PS01244 Aconitase family signature 2. 484 497 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 10 881 0.0 T 13-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 PRINTS PR00415 Aconitase family signature 208 223 1.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 PRINTS PR00415 Aconitase family signature 284 297 1.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 PRINTS PR00415 Aconitase family signature 161 169 1.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 PRINTS PR00415 Aconitase family signature 270 283 1.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 PRINTS PR00415 Aconitase family signature 484 497 1.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 PRINTS PR00415 Aconitase family signature 363 377 1.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 PRINTS PR00415 Aconitase family signature 422 433 1.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 PRINTS PR00415 Aconitase family signature 137 150 1.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 PRINTS PR00415 Aconitase family signature 194 207 1.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 Gene3D G3DSA:3.20.19.10 644 881 1.6E-106 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 Gene3D G3DSA:3.30.499.10 364 581 1.9E-102 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 Gene3D G3DSA:3.30.499.20 1 363 3.9E-159 T 13-10-2018 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 Gene3D G3DSA:1.10.1440.20 583 641 5.3E-17 T 13-10-2018 Y11_10601 174eaec7ad22fbfc38cf6ab1e937671e 881 ProSitePatterns PS00450 Aconitase family signature 1. 418 434 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Y11_28061 e56bf42e3574726203b6ab727edf9775 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 1.3E-209 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Y11_28061 e56bf42e3574726203b6ab727edf9775 457 Gene3D G3DSA:1.10.275.10 1 107 1.7E-36 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal Y11_28061 e56bf42e3574726203b6ab727edf9775 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.046 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Y11_28061 e56bf42e3574726203b6ab727edf9775 457 Pfam PF00206 Lyase 6 301 2.1E-96 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal Y11_28061 e56bf42e3574726203b6ab727edf9775 457 Gene3D G3DSA:1.10.40.30 363 433 1.6E-148 T 13-10-2018 Y11_28061 e56bf42e3574726203b6ab727edf9775 457 SUPERFAMILY SSF48557 3 456 7.23E-142 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 Y11_28061 e56bf42e3574726203b6ab727edf9775 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Y11_28061 e56bf42e3574726203b6ab727edf9775 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 6.1E-68 T 13-10-2018 Y11_28061 e56bf42e3574726203b6ab727edf9775 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 6.1E-68 T 13-10-2018 Y11_28061 e56bf42e3574726203b6ab727edf9775 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 6.1E-68 T 13-10-2018 Y11_28061 e56bf42e3574726203b6ab727edf9775 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 6.1E-68 T 13-10-2018 Y11_28061 e56bf42e3574726203b6ab727edf9775 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 6.1E-68 T 13-10-2018 Y11_28061 e56bf42e3574726203b6ab727edf9775 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 6.1E-68 T 13-10-2018 Y11_28061 e56bf42e3574726203b6ab727edf9775 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.4E-23 T 13-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Y11_28061 e56bf42e3574726203b6ab727edf9775 457 Gene3D G3DSA:1.20.200.10 108 446 1.6E-148 T 13-10-2018 Y11_28061 e56bf42e3574726203b6ab727edf9775 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.7E-28 T 13-10-2018 IPR000362 Fumarate lyase family Y11_28061 e56bf42e3574726203b6ab727edf9775 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.7E-28 T 13-10-2018 IPR000362 Fumarate lyase family Y11_28061 e56bf42e3574726203b6ab727edf9775 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.7E-28 T 13-10-2018 IPR000362 Fumarate lyase family Y11_28061 e56bf42e3574726203b6ab727edf9775 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.7E-28 T 13-10-2018 IPR000362 Fumarate lyase family Y11_06651 36de11dc3d20e98259ee53d31e109a7a 218 Pfam PF08242 Methyltransferase domain 54 151 3.8E-8 T 13-10-2018 IPR013217 Methyltransferase type 12 Y11_06651 36de11dc3d20e98259ee53d31e109a7a 218 SUPERFAMILY SSF53335 18 184 1.65E-15 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_06651 36de11dc3d20e98259ee53d31e109a7a 218 Gene3D G3DSA:3.40.50.150 29 210 1.3E-14 T 13-10-2018 Y11_06651 36de11dc3d20e98259ee53d31e109a7a 218 PIRSF PIRSF011491 1 218 4.4E-91 T 13-10-2018 IPR016584 Methyltransferase VrtF-like Y11_33371 ca71b1a8339d8fd0623b39e23d69e471 293 Pfam PF03466 LysR substrate binding domain 88 280 5.2E-20 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_33371 ca71b1a8339d8fd0623b39e23d69e471 293 SUPERFAMILY SSF46785 2 82 3.97E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_33371 ca71b1a8339d8fd0623b39e23d69e471 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.3E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_33371 ca71b1a8339d8fd0623b39e23d69e471 293 Gene3D G3DSA:1.10.10.10 1 84 1.7E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_33371 ca71b1a8339d8fd0623b39e23d69e471 293 Gene3D G3DSA:3.40.190.10 90 280 2.5E-14 T 13-10-2018 Y11_33371 ca71b1a8339d8fd0623b39e23d69e471 293 SUPERFAMILY SSF53850 88 281 4.96E-20 T 13-10-2018 Y11_33371 ca71b1a8339d8fd0623b39e23d69e471 293 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 284 51.28 T 13-10-2018 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 Y11_33371 ca71b1a8339d8fd0623b39e23d69e471 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_33371 ca71b1a8339d8fd0623b39e23d69e471 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_33371 ca71b1a8339d8fd0623b39e23d69e471 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_33371 ca71b1a8339d8fd0623b39e23d69e471 293 Gene3D G3DSA:3.40.190.10 159 254 2.5E-14 T 13-10-2018 Y11_15511 faaa9e88bf35b6f96b2a44c6a80df841 390 Pfam PF00144 Beta-lactamase 19 380 2.6E-64 T 13-10-2018 IPR001466 Beta-lactamase-related Y11_15511 faaa9e88bf35b6f96b2a44c6a80df841 390 Gene3D G3DSA:3.40.710.10 3 389 4.9E-106 T 13-10-2018 Y11_15511 faaa9e88bf35b6f96b2a44c6a80df841 390 SUPERFAMILY SSF56601 17 387 1.84E-88 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_08601 ef62d5921e27f34f4cd4fcc4102590e5 403 Gene3D G3DSA:1.20.1290.10 284 403 9.8E-23 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Y11_08601 ef62d5921e27f34f4cd4fcc4102590e5 403 SUPERFAMILY SSF69118 260 401 6.33E-25 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Y11_08601 ef62d5921e27f34f4cd4fcc4102590e5 403 Gene3D G3DSA:1.20.1290.10 91 207 2.4E-8 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Y11_08601 ef62d5921e27f34f4cd4fcc4102590e5 403 SUPERFAMILY SSF69118 72 207 1.46E-15 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Y11_14711 83287ba14dc381f7798d3b2028fe7117 344 SMART SM00829 22 339 2.3E-6 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Y11_14711 83287ba14dc381f7798d3b2028fe7117 344 Gene3D G3DSA:3.40.50.720 130 311 4.2E-134 T 13-10-2018 Y11_14711 83287ba14dc381f7798d3b2028fe7117 344 SUPERFAMILY SSF50129 7 146 1.62E-45 T 13-10-2018 IPR011032 GroES-like superfamily Y11_14711 83287ba14dc381f7798d3b2028fe7117 344 Pfam PF00107 Zinc-binding dehydrogenase 161 289 1.6E-18 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Y11_14711 83287ba14dc381f7798d3b2028fe7117 344 Gene3D G3DSA:3.90.180.10 19 339 4.2E-134 T 13-10-2018 Y11_14711 83287ba14dc381f7798d3b2028fe7117 344 SUPERFAMILY SSF51735 126 307 7.74E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_14711 83287ba14dc381f7798d3b2028fe7117 344 Pfam PF16884 N-terminal domain of oxidoreductase 9 114 3.4E-43 T 13-10-2018 Y11_20731 4c0e0f81c1e458597dce4932ede06328 619 SUPERFAMILY SSF52518 316 503 2.95E-60 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_20731 4c0e0f81c1e458597dce4932ede06328 619 Gene3D G3DSA:3.40.50.970 317 486 1.1E-67 T 13-10-2018 Y11_20731 4c0e0f81c1e458597dce4932ede06328 619 Pfam PF02780 Transketolase, C-terminal domain 494 610 9.1E-26 T 13-10-2018 IPR033248 Transketolase, C-terminal domain Y11_20731 4c0e0f81c1e458597dce4932ede06328 619 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Y11_20731 4c0e0f81c1e458597dce4932ede06328 619 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 2.0E-117 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Y11_20731 4c0e0f81c1e458597dce4932ede06328 619 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 619 46.103 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Y11_20731 4c0e0f81c1e458597dce4932ede06328 619 SMART SM00861 319 483 1.5E-65 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Y11_20731 4c0e0f81c1e458597dce4932ede06328 619 SUPERFAMILY SSF52518 9 381 1.52E-76 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_20731 4c0e0f81c1e458597dce4932ede06328 619 SUPERFAMILY SSF52922 491 618 4.19E-33 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Y11_20731 4c0e0f81c1e458597dce4932ede06328 619 Gene3D G3DSA:3.40.50.920 494 619 3.6E-45 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Y11_20731 4c0e0f81c1e458597dce4932ede06328 619 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 0.0 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Y11_20731 4c0e0f81c1e458597dce4932ede06328 619 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 3.4E-39 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Y11_16321 ad97ddc4049bc095807437eb5ec134dc 116 Pfam PF00936 BMC domain 45 109 6.3E-13 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Y11_16321 ad97ddc4049bc095807437eb5ec134dc 116 PIRSF PIRSF012296 1 116 9.5E-57 T 13-10-2018 IPR009307 Ethanolamine utilisation EutS GO:0031469 Y11_16321 ad97ddc4049bc095807437eb5ec134dc 116 SMART SM00877 44 116 3.0E-17 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Y11_16321 ad97ddc4049bc095807437eb5ec134dc 116 SUPERFAMILY SSF143414 44 108 3.53E-14 T 13-10-2018 IPR037233 CcmK-like superfamily Y11_16321 ad97ddc4049bc095807437eb5ec134dc 116 Gene3D G3DSA:3.30.70.1710 1 116 2.1E-52 T 13-10-2018 Y11_16821 9406843240b45551ee82f27824e814f9 452 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 438 1.2E-178 T 13-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 Y11_16821 9406843240b45551ee82f27824e814f9 452 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 448 8.2E-131 T 13-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 Y11_35201 6a2548c2b9f3020a716a0be514443c9e 493 Pfam PF03958 Bacterial type II/III secretion system short domain 175 266 3.1E-16 T 13-10-2018 IPR005644 NolW-like Y11_35201 6a2548c2b9f3020a716a0be514443c9e 493 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 28 490 1.7E-173 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Y11_35201 6a2548c2b9f3020a716a0be514443c9e 493 Gene3D G3DSA:3.30.1370.120 101 168 2.8E-30 T 13-10-2018 IPR038591 NolW-like superfamily Y11_35201 6a2548c2b9f3020a716a0be514443c9e 493 Gene3D G3DSA:3.55.50.30 14 99 5.3E-23 T 13-10-2018 Y11_35201 6a2548c2b9f3020a716a0be514443c9e 493 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 435 468 - T 13-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 Y11_35201 6a2548c2b9f3020a716a0be514443c9e 493 Pfam PF00263 Bacterial type II and III secretion system protein 330 486 2.0E-35 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Y11_35201 6a2548c2b9f3020a716a0be514443c9e 493 Gene3D G3DSA:3.30.1370.120 171 265 6.3E-12 T 13-10-2018 IPR038591 NolW-like superfamily Y11_35201 6a2548c2b9f3020a716a0be514443c9e 493 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 269 289 1.7E-39 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Y11_35201 6a2548c2b9f3020a716a0be514443c9e 493 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 343 362 1.7E-39 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Y11_35201 6a2548c2b9f3020a716a0be514443c9e 493 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 468 487 1.7E-39 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Y11_35201 6a2548c2b9f3020a716a0be514443c9e 493 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 187 204 1.7E-39 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Y11_35201 6a2548c2b9f3020a716a0be514443c9e 493 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 377 392 1.7E-39 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Y11_41371 1e4fcbc535a227ba1a55d1e63bd12968 288 SUPERFAMILY SSF53901 94 287 2.24E-58 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_41371 1e4fcbc535a227ba1a55d1e63bd12968 288 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 35 51 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site Y11_41371 1e4fcbc535a227ba1a55d1e63bd12968 288 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 126 1.0E-24 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Y11_41371 1e4fcbc535a227ba1a55d1e63bd12968 288 Gene3D G3DSA:3.40.47.10 140 287 7.2E-45 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_41371 1e4fcbc535a227ba1a55d1e63bd12968 288 SUPERFAMILY SSF53901 4 133 1.07E-34 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_41371 1e4fcbc535a227ba1a55d1e63bd12968 288 SMART SM00825 Beta-ketoacyl synthase 1 287 9.1E-8 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Y11_41371 1e4fcbc535a227ba1a55d1e63bd12968 288 Gene3D G3DSA:3.40.47.10 1 139 2.6E-38 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_41371 1e4fcbc535a227ba1a55d1e63bd12968 288 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 134 243 7.9E-29 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Y11_28731 61f60c31ca146ff25fe1b23ec0e8ad46 458 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 153 6.5E-11 T 13-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain Y11_28731 61f60c31ca146ff25fe1b23ec0e8ad46 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 7.5E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_28731 61f60c31ca146ff25fe1b23ec0e8ad46 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 7.5E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_28731 61f60c31ca146ff25fe1b23ec0e8ad46 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 7.5E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_28731 61f60c31ca146ff25fe1b23ec0e8ad46 458 Gene3D G3DSA:3.30.565.10 304 454 2.0E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_28731 61f60c31ca146ff25fe1b23ec0e8ad46 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 298 1.3E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_28731 61f60c31ca146ff25fe1b23ec0e8ad46 458 SMART SM00388 238 300 1.7E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_28731 61f60c31ca146ff25fe1b23ec0e8ad46 458 SUPERFAMILY SSF47384 224 299 1.51E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_28731 61f60c31ca146ff25fe1b23ec0e8ad46 458 SMART SM00387 345 455 1.3E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_28731 61f60c31ca146ff25fe1b23ec0e8ad46 458 Gene3D G3DSA:1.10.287.130 188 302 3.5E-37 T 13-10-2018 Y11_28731 61f60c31ca146ff25fe1b23ec0e8ad46 458 Pfam PF00672 HAMP domain 184 233 1.6E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_28731 61f60c31ca146ff25fe1b23ec0e8ad46 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 454 1.7E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_28731 61f60c31ca146ff25fe1b23ec0e8ad46 458 SMART SM00304 184 237 1.0E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_28731 61f60c31ca146ff25fe1b23ec0e8ad46 458 Gene3D G3DSA:3.30.450.210 27 147 7.8E-11 T 13-10-2018 IPR038515 CpxA, periplasmic domain superfamily Y11_28731 61f60c31ca146ff25fe1b23ec0e8ad46 458 SUPERFAMILY SSF55874 289 455 1.96E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_04431 828d78cf83939e98f0fec1b7c10d953d 396 Gene3D G3DSA:3.40.640.10 45 315 3.7E-164 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_04431 828d78cf83939e98f0fec1b7c10d953d 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Y11_04431 828d78cf83939e98f0fec1b7c10d953d 396 Gene3D G3DSA:3.90.1150.10 11 391 3.7E-164 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_04431 828d78cf83939e98f0fec1b7c10d953d 396 SUPERFAMILY SSF53383 1 395 4.67E-119 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_04431 828d78cf83939e98f0fec1b7c10d953d 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.2E-39 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Y11_04431 828d78cf83939e98f0fec1b7c10d953d 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.2E-39 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Y11_04431 828d78cf83939e98f0fec1b7c10d953d 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.2E-39 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Y11_04431 828d78cf83939e98f0fec1b7c10d953d 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.2E-39 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Y11_04431 828d78cf83939e98f0fec1b7c10d953d 396 Pfam PF00155 Aminotransferase class I and II 27 392 1.8E-92 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 Gene3D G3DSA:3.40.50.720 233 366 4.1E-36 T 13-10-2018 Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 Gene3D G3DSA:3.30.70.1450 367 458 1.3E-29 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 SUPERFAMILY SSF116726 391 440 5.36E-8 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 SUPERFAMILY SSF51735 232 376 5.43E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 Gene3D G3DSA:3.30.70.1450 140 232 1.5E-22 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 SUPERFAMILY SSF116726 148 226 2.75E-10 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 SUPERFAMILY SSF51735 1 152 1.19E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 Pfam PF02254 TrkA-N domain 235 350 9.0E-25 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 Pfam PF02254 TrkA-N domain 3 124 1.0E-29 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 Pfam PF02080 TrkA-C domain 391 451 1.4E-10 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 Pfam PF02080 TrkA-C domain 156 225 6.1E-12 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 Gene3D G3DSA:3.40.50.720 2 139 1.2E-49 T 13-10-2018 Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 5.2E-35 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 5.2E-35 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 5.2E-35 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 5.2E-35 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Y11_33201 eb6936db2fc263a4b61c6b0f23ba7e61 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 5.2E-35 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Y11_06361 867218653d371834c651718fe701772b 195 Hamap MF_01592 Uncharacterized Nudix hydrolase NudL [nudL]. 6 195 50.538 T 13-10-2018 IPR023735 Uncharacterised nudix hydrolase NudL GO:0016818 Y11_06361 867218653d371834c651718fe701772b 195 SUPERFAMILY SSF55811 16 186 9.88E-33 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Y11_06361 867218653d371834c651718fe701772b 195 Pfam PF00293 NUDIX domain 35 140 2.9E-13 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Y11_06361 867218653d371834c651718fe701772b 195 Gene3D G3DSA:3.90.79.10 10 194 1.0E-45 T 13-10-2018 Y11_06361 867218653d371834c651718fe701772b 195 ProSitePatterns PS01293 Nudix CoA signature. 52 72 - T 13-10-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918|Reactome: R-HSA-9033241 Y11_05391 f6216b8d1294bd99d9ae78b37099ea2e 427 Pfam PF13437 HlyD family secretion protein 266 390 3.5E-11 T 13-10-2018 Y11_05391 f6216b8d1294bd99d9ae78b37099ea2e 427 Gene3D G3DSA:1.10.287.470 105 145 1.5E-5 T 13-10-2018 Y11_05391 f6216b8d1294bd99d9ae78b37099ea2e 427 Gene3D G3DSA:2.40.30.170 58 70 1.5E-5 T 13-10-2018 Y11_05391 f6216b8d1294bd99d9ae78b37099ea2e 427 Gene3D G3DSA:2.40.50.100 262 301 2.4E-8 T 13-10-2018 Y11_05391 f6216b8d1294bd99d9ae78b37099ea2e 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 277 298 1.1E-12 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_05391 f6216b8d1294bd99d9ae78b37099ea2e 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 1.1E-12 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_05391 f6216b8d1294bd99d9ae78b37099ea2e 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 310 334 1.1E-12 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_05391 f6216b8d1294bd99d9ae78b37099ea2e 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 402 422 1.1E-12 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_05391 f6216b8d1294bd99d9ae78b37099ea2e 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 387 402 1.1E-12 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_05391 f6216b8d1294bd99d9ae78b37099ea2e 427 Gene3D G3DSA:2.40.50.100 71 104 1.5E-5 T 13-10-2018 Y11_05391 f6216b8d1294bd99d9ae78b37099ea2e 427 Gene3D G3DSA:1.10.287.470 197 261 2.4E-8 T 13-10-2018 Y11_05391 f6216b8d1294bd99d9ae78b37099ea2e 427 Gene3D G3DSA:2.40.30.170 302 358 2.4E-8 T 13-10-2018 Y11_36201 72aad517008608c515264af7e4feb42f 246 Gene3D G3DSA:3.30.1330.30 1 75 1.3E-28 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like Y11_36201 72aad517008608c515264af7e4feb42f 246 SMART SM00967 4 80 6.4E-22 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Y11_36201 72aad517008608c515264af7e4feb42f 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 76 8.2E-20 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Y11_36201 72aad517008608c515264af7e4feb42f 246 Gene3D G3DSA:3.40.1280.10 77 243 5.1E-66 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Y11_36201 72aad517008608c515264af7e4feb42f 246 SUPERFAMILY SSF75217 69 243 5.17E-49 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Y11_36201 72aad517008608c515264af7e4feb42f 246 Pfam PF00588 SpoU rRNA Methylase family 96 236 9.8E-40 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Y11_36201 72aad517008608c515264af7e4feb42f 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.307 T 13-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB Y11_36201 72aad517008608c515264af7e4feb42f 246 SUPERFAMILY SSF55315 2 75 6.0E-20 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like Y11_36201 72aad517008608c515264af7e4feb42f 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 9.4E-90 T 13-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Y11_01551 e7363de7a2f70ba80732d2f7285d1c2b 260 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 143 1.7E-13 T 13-10-2018 IPR000014 PAS domain Y11_01551 e7363de7a2f70ba80732d2f7285d1c2b 260 SMART SM00267 165 260 0.0042 T 13-10-2018 IPR000160 GGDEF domain Y11_01551 e7363de7a2f70ba80732d2f7285d1c2b 260 Gene3D G3DSA:3.30.450.20 15 131 9.8E-32 T 13-10-2018 Y11_01551 e7363de7a2f70ba80732d2f7285d1c2b 260 SUPERFAMILY SSF55785 23 137 2.62E-25 T 13-10-2018 IPR035965 PAS domain superfamily Y11_01551 e7363de7a2f70ba80732d2f7285d1c2b 260 Pfam PF00990 Diguanylate cyclase, GGDEF domain 180 259 9.2E-22 T 13-10-2018 IPR000160 GGDEF domain Y11_01551 e7363de7a2f70ba80732d2f7285d1c2b 260 SMART SM00086 93 136 8.4E-8 T 13-10-2018 IPR001610 PAC motif Y11_01551 e7363de7a2f70ba80732d2f7285d1c2b 260 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 179 259 4.8E-24 T 13-10-2018 IPR000160 GGDEF domain Y11_01551 e7363de7a2f70ba80732d2f7285d1c2b 260 SUPERFAMILY SSF55073 184 259 4.24E-21 T 13-10-2018 IPR029787 Nucleotide cyclase Y11_01551 e7363de7a2f70ba80732d2f7285d1c2b 260 SMART SM00091 18 86 3.5E-5 T 13-10-2018 IPR000014 PAS domain Y11_01551 e7363de7a2f70ba80732d2f7285d1c2b 260 Pfam PF08447 PAS fold 41 129 2.2E-25 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Y11_01551 e7363de7a2f70ba80732d2f7285d1c2b 260 Gene3D G3DSA:3.30.70.270 148 260 2.1E-24 T 13-10-2018 Y11_31811 6633dccb62a11ea606969202d6e9944f 247 Pfam PF03306 Alpha-acetolactate decarboxylase 17 234 1.3E-84 T 13-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 Y11_31811 6633dccb62a11ea606969202d6e9944f 247 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 17 244 1.2E-91 T 13-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 Y11_31811 6633dccb62a11ea606969202d6e9944f 247 SUPERFAMILY SSF117856 17 246 5.75E-83 T 13-10-2018 Y11_31811 6633dccb62a11ea606969202d6e9944f 247 Gene3D G3DSA:3.30.1330.80 92 214 1.2E-80 T 13-10-2018 Y11_31811 6633dccb62a11ea606969202d6e9944f 247 Gene3D G3DSA:3.30.1330.80 17 233 1.2E-80 T 13-10-2018 Y11_31811 6633dccb62a11ea606969202d6e9944f 247 PIRSF PIRSF001332 4 247 3.5E-94 T 13-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 Y11_43341 ff600bd37fd006ec13beb25e9d0deeef 450 Gene3D G3DSA:3.30.420.40 385 429 7.0E-13 T 13-10-2018 Y11_43341 ff600bd37fd006ec13beb25e9d0deeef 450 Gene3D G3DSA:3.90.640.10 313 384 7.0E-13 T 13-10-2018 Y11_43341 ff600bd37fd006ec13beb25e9d0deeef 450 Pfam PF00012 Hsp70 protein 130 229 2.2E-8 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_43341 ff600bd37fd006ec13beb25e9d0deeef 450 Pfam PF00012 Hsp70 protein 331 422 4.2E-6 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_43341 ff600bd37fd006ec13beb25e9d0deeef 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Y11_43341 ff600bd37fd006ec13beb25e9d0deeef 450 SUPERFAMILY SSF53067 208 447 5.71E-32 T 13-10-2018 Y11_43341 ff600bd37fd006ec13beb25e9d0deeef 450 SUPERFAMILY SSF53067 1 204 5.18E-26 T 13-10-2018 Y11_00671 0fc75b7931b1fe4207e1e277b531733c 261 SMART SM00382 39 226 3.2E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_00671 0fc75b7931b1fe4207e1e277b531733c 261 Gene3D G3DSA:3.40.50.300 8 253 3.6E-68 T 13-10-2018 Y11_00671 0fc75b7931b1fe4207e1e277b531733c 261 SUPERFAMILY SSF52540 10 232 1.0E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_00671 0fc75b7931b1fe4207e1e277b531733c 261 Pfam PF00005 ABC transporter 30 178 1.4E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_00671 0fc75b7931b1fe4207e1e277b531733c 261 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_39861 d1a13acc83155153c887bccc1554d35c 437 SMART SM01011 1 136 2.3E-58 T 13-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 Y11_39861 d1a13acc83155153c887bccc1554d35c 437 Pfam PF00557 Metallopeptidase family M24 182 412 6.0E-66 T 13-10-2018 IPR000994 Peptidase M24 Y11_39861 d1a13acc83155153c887bccc1554d35c 437 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 126 4.8E-36 T 13-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 Y11_39861 d1a13acc83155153c887bccc1554d35c 437 Gene3D G3DSA:3.40.350.10 1 171 1.2E-65 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Y11_39861 d1a13acc83155153c887bccc1554d35c 437 PRINTS PR00599 Methionine aminopeptidase-1 signature 371 383 3.2E-5 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Y11_39861 d1a13acc83155153c887bccc1554d35c 437 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 269 3.2E-5 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Y11_39861 d1a13acc83155153c887bccc1554d35c 437 Gene3D G3DSA:3.90.230.10 172 437 1.8E-104 T 13-10-2018 Y11_39861 d1a13acc83155153c887bccc1554d35c 437 SUPERFAMILY SSF55920 175 434 8.25E-88 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like Y11_39861 d1a13acc83155153c887bccc1554d35c 437 SUPERFAMILY SSF53092 1 174 1.91E-53 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Y11_39861 d1a13acc83155153c887bccc1554d35c 437 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 13-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Y11_24881 673df353269cc7287c091be5ca03a357 141 Pfam PF06853 Protein of unknown function (DUF1249) 22 135 2.7E-40 T 13-10-2018 IPR009659 Protein of unknown function DUF1249 Y11_24051 7a629afce6b1951fcd0a1acf3c514e1f 371 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 4 359 6.6E-173 T 13-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 Y11_24051 7a629afce6b1951fcd0a1acf3c514e1f 371 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 53 198 1.3E-33 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_24051 7a629afce6b1951fcd0a1acf3c514e1f 371 SUPERFAMILY SSF56770 40 296 2.02E-84 T 13-10-2018 Y11_24051 7a629afce6b1951fcd0a1acf3c514e1f 371 PIRSF PIRSF000310 1 363 2.7E-134 T 13-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 Y11_24051 7a629afce6b1951fcd0a1acf3c514e1f 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 150 174 4.1E-68 T 13-10-2018 Y11_24051 7a629afce6b1951fcd0a1acf3c514e1f 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 247 273 4.1E-68 T 13-10-2018 Y11_24051 7a629afce6b1951fcd0a1acf3c514e1f 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 61 85 4.1E-68 T 13-10-2018 Y11_24051 7a629afce6b1951fcd0a1acf3c514e1f 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 38 60 4.1E-68 T 13-10-2018 Y11_24051 7a629afce6b1951fcd0a1acf3c514e1f 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 107 130 4.1E-68 T 13-10-2018 Y11_24051 7a629afce6b1951fcd0a1acf3c514e1f 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 223 241 4.1E-68 T 13-10-2018 Y11_24051 7a629afce6b1951fcd0a1acf3c514e1f 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 205 222 4.1E-68 T 13-10-2018 Y11_24051 7a629afce6b1951fcd0a1acf3c514e1f 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 179 202 4.1E-68 T 13-10-2018 Y11_24051 7a629afce6b1951fcd0a1acf3c514e1f 371 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 218 296 1.0E-25 T 13-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal Y11_24051 7a629afce6b1951fcd0a1acf3c514e1f 371 Gene3D G3DSA:4.10.480.10 218 308 9.9E-30 T 13-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily Y11_24051 7a629afce6b1951fcd0a1acf3c514e1f 371 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 31 3.8E-6 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Y11_24051 7a629afce6b1951fcd0a1acf3c514e1f 371 Gene3D G3DSA:3.40.50.700 37 216 3.2E-69 T 13-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Y11_29061 4b352f54d70bc5ba01d17be9d730b43d 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 222 8.8E-10 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Y11_29061 4b352f54d70bc5ba01d17be9d730b43d 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 13-10-2018 IPR018336 Ribonuclease PH, conserved site Y11_29061 4b352f54d70bc5ba01d17be9d730b43d 238 Gene3D G3DSA:3.30.230.70 10 238 7.3E-64 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Y11_29061 4b352f54d70bc5ba01d17be9d730b43d 238 SUPERFAMILY SSF54211 1 181 6.58E-44 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_29061 4b352f54d70bc5ba01d17be9d730b43d 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 8.6E-110 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Y11_29061 4b352f54d70bc5ba01d17be9d730b43d 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 45.073 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Y11_29061 4b352f54d70bc5ba01d17be9d730b43d 238 SUPERFAMILY SSF55666 153 237 1.31E-24 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Y11_29061 4b352f54d70bc5ba01d17be9d730b43d 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.4E-24 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Y11_23051 9e81d8b0fc5b2f173cf79b5e332e6d40 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 57.822 T 13-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria Y11_23051 9e81d8b0fc5b2f173cf79b5e332e6d40 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_23051 9e81d8b0fc5b2f173cf79b5e332e6d40 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_23051 9e81d8b0fc5b2f173cf79b5e332e6d40 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_23051 9e81d8b0fc5b2f173cf79b5e332e6d40 297 SUPERFAMILY SSF46785 4 110 5.75E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_23051 9e81d8b0fc5b2f173cf79b5e332e6d40 297 Gene3D G3DSA:1.10.10.10 2 83 1.2E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_23051 9e81d8b0fc5b2f173cf79b5e332e6d40 297 Gene3D G3DSA:3.40.190.290 89 294 4.2E-63 T 13-10-2018 Y11_23051 9e81d8b0fc5b2f173cf79b5e332e6d40 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 6.5E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_23051 9e81d8b0fc5b2f173cf79b5e332e6d40 297 Pfam PF03466 LysR substrate binding domain 93 287 1.6E-12 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_23051 9e81d8b0fc5b2f173cf79b5e332e6d40 297 SUPERFAMILY SSF53850 92 290 3.62E-19 T 13-10-2018 Y11_23051 9e81d8b0fc5b2f173cf79b5e332e6d40 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 6.9E-111 T 13-10-2018 IPR017685 HTH-type transcriptional regulator ArgP Y11_30951 f7dcdd6d554ca35289aaf0503f9a351f 47 SUPERFAMILY SSF143737 1 43 7.19E-21 T 13-10-2018 IPR038025 Antitoxin CbeA superfamily Y11_30951 f7dcdd6d554ca35289aaf0503f9a351f 47 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 1 42 8.5E-19 T 13-10-2018 IPR009320 Antitoxin CbeA GO:0051495 Y11_30951 f7dcdd6d554ca35289aaf0503f9a351f 47 Gene3D G3DSA:3.30.450.20 1 47 1.5E-21 T 13-10-2018 Y11_00391 eb270b64d8a6e6cc0c7d8cb132195740 199 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 9 193 1.3E-104 T 13-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 Y11_00391 eb270b64d8a6e6cc0c7d8cb132195740 199 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 21 192 2.6E-78 T 13-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal Y11_00391 eb270b64d8a6e6cc0c7d8cb132195740 199 Gene3D G3DSA:1.10.3820.10 18 195 2.9E-39 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily Y11_00391 eb270b64d8a6e6cc0c7d8cb132195740 199 PIRSF PIRSF000013 1 199 2.4E-107 T 13-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 Y11_00391 eb270b64d8a6e6cc0c7d8cb132195740 199 SUPERFAMILY SSF48695 16 195 1.1E-63 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Y11_21931 6d8d4cacf7ad4f966b1ac4f0c792fe00 243 SUPERFAMILY SSF64438 3 242 4.76E-88 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Y11_21931 6d8d4cacf7ad4f966b1ac4f0c792fe00 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 5.9E-76 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Y11_21931 6d8d4cacf7ad4f966b1ac4f0c792fe00 243 Gene3D G3DSA:3.60.140.10 1 243 1.1E-93 T 13-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Y11_21931 6d8d4cacf7ad4f966b1ac4f0c792fe00 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 26 242 7.8E-68 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Y11_31481 86940c6e5291fcd301b380029f30d41f 399 Gene3D G3DSA:3.50.50.60 7 388 1.1E-126 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_31481 86940c6e5291fcd301b380029f30d41f 399 Pfam PF03486 HI0933-like protein 4 392 1.6E-154 T 13-10-2018 Y11_31481 86940c6e5291fcd301b380029f30d41f 399 Gene3D G3DSA:1.10.8.260 262 322 1.1E-126 T 13-10-2018 IPR023166 HI0933-like insert domain superfamily Y11_31481 86940c6e5291fcd301b380029f30d41f 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 3.8E-8 T 13-10-2018 Y11_31481 86940c6e5291fcd301b380029f30d41f 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 3.8E-8 T 13-10-2018 Y11_31481 86940c6e5291fcd301b380029f30d41f 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.8E-8 T 13-10-2018 Y11_31481 86940c6e5291fcd301b380029f30d41f 399 SUPERFAMILY SSF160996 190 338 2.88E-43 T 13-10-2018 Y11_31481 86940c6e5291fcd301b380029f30d41f 399 SUPERFAMILY SSF51905 3 395 1.03E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_31481 86940c6e5291fcd301b380029f30d41f 399 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 392 3.4E-128 T 13-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Y11_31481 86940c6e5291fcd301b380029f30d41f 399 Gene3D G3DSA:2.40.30.10 188 339 1.1E-126 T 13-10-2018 Y11_40511 46469ccc356e7b45e41e917b0b18abf5 214 SUPERFAMILY SSF52833 4 190 1.79E-27 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_40511 46469ccc356e7b45e41e917b0b18abf5 214 Gene3D G3DSA:3.40.30.10 1 213 1.4E-45 T 13-10-2018 Y11_32701 2ff8b7940f35573c5cec9bfb9c6f015f 638 SMART SM00382 26 223 3.6E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_32701 2ff8b7940f35573c5cec9bfb9c6f015f 638 SMART SM00382 337 506 4.7E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_32701 2ff8b7940f35573c5cec9bfb9c6f015f 638 Gene3D G3DSA:3.40.50.300 6 274 7.2E-60 T 13-10-2018 Y11_32701 2ff8b7940f35573c5cec9bfb9c6f015f 638 SUPERFAMILY SSF52540 2 255 2.62E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_32701 2ff8b7940f35573c5cec9bfb9c6f015f 638 SUPERFAMILY SSF52540 294 518 1.02E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_32701 2ff8b7940f35573c5cec9bfb9c6f015f 638 Pfam PF12848 ABC transporter 217 297 1.2E-28 T 13-10-2018 IPR032781 ABC-transporter extension domain Y11_32701 2ff8b7940f35573c5cec9bfb9c6f015f 638 Pfam PF00005 ABC transporter 328 459 2.7E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_32701 2ff8b7940f35573c5cec9bfb9c6f015f 638 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_32701 2ff8b7940f35573c5cec9bfb9c6f015f 638 Pfam PF00005 ABC transporter 17 178 4.7E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_32701 2ff8b7940f35573c5cec9bfb9c6f015f 638 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_32701 2ff8b7940f35573c5cec9bfb9c6f015f 638 Gene3D G3DSA:3.40.50.300 276 545 2.4E-57 T 13-10-2018 Y11_07201 299dc9b2fdb3f1f0b51c1db0405c86f0 182 Gene3D G3DSA:3.40.630.30 1 157 5.9E-41 T 13-10-2018 Y11_07201 299dc9b2fdb3f1f0b51c1db0405c86f0 182 Pfam PF13302 Acetyltransferase (GNAT) domain 8 148 6.7E-30 T 13-10-2018 IPR000182 GNAT domain Y11_07201 299dc9b2fdb3f1f0b51c1db0405c86f0 182 SUPERFAMILY SSF55729 1 150 1.42E-37 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_03071 1d6f274bc280560426ab27cd13b7bc41 520 Pfam PF00563 EAL domain 272 505 4.0E-63 T 13-10-2018 IPR001633 EAL domain Y11_03071 1d6f274bc280560426ab27cd13b7bc41 520 Gene3D G3DSA:3.20.20.450 265 520 4.2E-75 T 13-10-2018 IPR035919 EAL domain superfamily Y11_03071 1d6f274bc280560426ab27cd13b7bc41 520 SMART SM00052 265 510 3.5E-82 T 13-10-2018 IPR001633 EAL domain Y11_03071 1d6f274bc280560426ab27cd13b7bc41 520 SUPERFAMILY SSF141868 271 517 7.06E-72 T 13-10-2018 IPR035919 EAL domain superfamily Y11_03071 1d6f274bc280560426ab27cd13b7bc41 520 Pfam PF12792 CSS motif domain associated with EAL 46 243 9.7E-35 T 13-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain Y11_29921 74f85b54730ca5860024d45c0cc538cb 205 SMART SM00448 3 114 2.8E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_29921 74f85b54730ca5860024d45c0cc538cb 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 7.2E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_29921 74f85b54730ca5860024d45c0cc538cb 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 7.2E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_29921 74f85b54730ca5860024d45c0cc538cb 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 7.2E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_29921 74f85b54730ca5860024d45c0cc538cb 205 Pfam PF00072 Response regulator receiver domain 5 114 1.2E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_29921 74f85b54730ca5860024d45c0cc538cb 205 Gene3D G3DSA:1.10.10.10 132 196 2.0E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_29921 74f85b54730ca5860024d45c0cc538cb 205 Gene3D G3DSA:3.40.50.2300 1 131 6.2E-38 T 13-10-2018 Y11_29921 74f85b54730ca5860024d45c0cc538cb 205 SUPERFAMILY SSF52172 3 162 4.98E-35 T 13-10-2018 IPR011006 CheY-like superfamily Y11_29921 74f85b54730ca5860024d45c0cc538cb 205 ProSitePatterns PS00622 LuxR-type HTH domain signature. 155 182 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_29921 74f85b54730ca5860024d45c0cc538cb 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 193 1.3E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_29921 74f85b54730ca5860024d45c0cc538cb 205 SMART SM00421 138 195 3.9E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_42171 23b42843562f02fc01ff0bb3e2cc58ac 192 SUPERFAMILY SSF58014 44 133 8.5E-27 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Y11_42171 23b42843562f02fc01ff0bb3e2cc58ac 192 Gene3D G3DSA:2.30.22.10 133 189 5.2E-26 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Y11_42171 23b42843562f02fc01ff0bb3e2cc58ac 192 Gene3D G3DSA:3.90.20.20 30 132 4.9E-34 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Y11_42171 23b42843562f02fc01ff0bb3e2cc58ac 192 SUPERFAMILY SSF51064 134 190 1.11E-18 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Y11_42171 23b42843562f02fc01ff0bb3e2cc58ac 192 Hamap MF_01151 Protein GrpE [grpE]. 4 189 21.581 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Y11_42171 23b42843562f02fc01ff0bb3e2cc58ac 192 Pfam PF01025 GrpE 20 189 7.2E-49 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Y11_42171 23b42843562f02fc01ff0bb3e2cc58ac 192 ProSitePatterns PS01071 grpE protein signature. 144 187 - T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Y11_42171 23b42843562f02fc01ff0bb3e2cc58ac 192 PRINTS PR00773 GrpE protein signature 86 101 4.0E-27 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Y11_42171 23b42843562f02fc01ff0bb3e2cc58ac 192 PRINTS PR00773 GrpE protein signature 168 187 4.0E-27 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Y11_42171 23b42843562f02fc01ff0bb3e2cc58ac 192 PRINTS PR00773 GrpE protein signature 58 74 4.0E-27 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Y11_42171 23b42843562f02fc01ff0bb3e2cc58ac 192 PRINTS PR00773 GrpE protein signature 141 156 4.0E-27 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Y11_33741 9e5e80b7bd2b96d7f7e73af74116c51b 376 Gene3D G3DSA:3.40.640.10 1 249 2.7E-83 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_33741 9e5e80b7bd2b96d7f7e73af74116c51b 376 PIRSF PIRSF000390 1 376 5.7E-117 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Y11_33741 9e5e80b7bd2b96d7f7e73af74116c51b 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 79.741 T 13-10-2018 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 Y11_33741 9e5e80b7bd2b96d7f7e73af74116c51b 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 2.0E-213 T 13-10-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 Y11_33741 9e5e80b7bd2b96d7f7e73af74116c51b 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 371 1.1E-85 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Y11_33741 9e5e80b7bd2b96d7f7e73af74116c51b 376 SUPERFAMILY SSF53383 2 375 9.68E-101 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_33741 9e5e80b7bd2b96d7f7e73af74116c51b 376 Gene3D G3DSA:3.90.1150.10 250 376 9.5E-25 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_07951 e8051b47fa079bc5462f33297db0ee37 335 Pfam PF01032 FecCD transport family 28 330 1.2E-83 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Y11_07951 e8051b47fa079bc5462f33297db0ee37 335 Gene3D G3DSA:1.10.3470.10 8 332 4.8E-107 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_07951 e8051b47fa079bc5462f33297db0ee37 335 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 7 333 32.96 T 13-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 Y11_07951 e8051b47fa079bc5462f33297db0ee37 335 SUPERFAMILY SSF81345 14 330 2.48E-79 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_42301 20ea1d154b3e9ed2a8f861cc5d3b0d21 218 PIRSF PIRSF016938 1 202 7.2E-32 T 13-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 Y11_42301 20ea1d154b3e9ed2a8f861cc5d3b0d21 218 Gene3D G3DSA:1.10.10.880 1 66 1.9E-27 T 13-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 Y11_42301 20ea1d154b3e9ed2a8f861cc5d3b0d21 218 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 5.4E-36 T 13-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 Y11_42301 20ea1d154b3e9ed2a8f861cc5d3b0d21 218 SUPERFAMILY SSF89069 1 66 2.48E-20 T 13-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 Y11_42301 20ea1d154b3e9ed2a8f861cc5d3b0d21 218 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 188 1.2E-21 T 13-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal Y11_34011 27eba130113dc6992c91073800347f67 156 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 27 154 4.7E-15 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 Y11_34011 27eba130113dc6992c91073800347f67 156 SUPERFAMILY SSF54637 13 155 2.49E-23 T 13-10-2018 IPR029069 HotDog domain superfamily Y11_34011 27eba130113dc6992c91073800347f67 156 Gene3D G3DSA:3.10.129.10 5 156 1.2E-48 T 13-10-2018 Y11_34011 27eba130113dc6992c91073800347f67 156 Pfam PF03061 Thioesterase superfamily 59 144 1.2E-14 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Y11_22931 1524fa526b1f7b7716b543a17a551d4c 120 PIRSF PIRSF006113 1 120 1.2E-54 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Y11_22931 1524fa526b1f7b7716b543a17a551d4c 120 Gene3D G3DSA:3.30.479.10 1 120 3.3E-50 T 13-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 Y11_22931 1524fa526b1f7b7716b543a17a551d4c 120 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 3 119 9.1E-38 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Y11_22931 1524fa526b1f7b7716b543a17a551d4c 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 5.2E-34 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Y11_22931 1524fa526b1f7b7716b543a17a551d4c 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 6 120 3.3E-35 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Y11_22931 1524fa526b1f7b7716b543a17a551d4c 120 SUPERFAMILY SSF55620 3 119 8.89E-41 T 13-10-2018 Y11_26331 ced065b46071e3199e3fb1e5ea361469 375 SUPERFAMILY SSF52540 66 209 1.47E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_26331 ced065b46071e3199e3fb1e5ea361469 375 Gene3D G3DSA:3.40.50.300 58 202 4.1E-19 T 13-10-2018 Y11_26331 ced065b46071e3199e3fb1e5ea361469 375 Pfam PF03969 AFG1-like ATPase 6 370 2.7E-144 T 13-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 Y11_26331 ced065b46071e3199e3fb1e5ea361469 375 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 375 52.76 T 13-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 Y11_12751 6d7d3389aaa737b16b09d3052ec2fe68 305 SUPERFAMILY SSF46785 5 86 2.04E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_12751 6d7d3389aaa737b16b09d3052ec2fe68 305 Pfam PF03466 LysR substrate binding domain 92 298 3.0E-36 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_12751 6d7d3389aaa737b16b09d3052ec2fe68 305 Gene3D G3DSA:1.10.10.10 5 91 7.1E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_12751 6d7d3389aaa737b16b09d3052ec2fe68 305 SUPERFAMILY SSF53850 92 301 2.71E-37 T 13-10-2018 Y11_12751 6d7d3389aaa737b16b09d3052ec2fe68 305 Gene3D G3DSA:3.40.190.290 94 298 1.4E-48 T 13-10-2018 Y11_12751 6d7d3389aaa737b16b09d3052ec2fe68 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.1E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 Gene3D G3DSA:3.30.70.1430 570 674 0.0 T 13-10-2018 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 SUPERFAMILY SSF82693 39 131 3.49E-27 T 13-10-2018 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 Gene3D G3DSA:3.30.70.1320 133 330 0.0 T 13-10-2018 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 SUPERFAMILY SSF82693 566 672 1.78E-27 T 13-10-2018 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 Gene3D G3DSA:1.20.1640.10 8 515 0.0 T 13-10-2018 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1041 0.0 T 13-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 Gene3D G3DSA:3.30.70.1430 38 820 0.0 T 13-10-2018 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 Gene3D G3DSA:3.30.70.1440 675 864 0.0 T 13-10-2018 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 SUPERFAMILY SSF82693 136 330 1.27E-24 T 13-10-2018 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 Gene3D G3DSA:1.20.1640.10 516 1024 0.0 T 13-10-2018 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 SUPERFAMILY SSF82714 182 272 6.41E-23 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 3.0E-107 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.0E-107 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 3.0E-107 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 3.0E-107 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 3.0E-107 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 3.0E-107 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 3.0E-107 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.0E-107 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 3.0E-107 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 SUPERFAMILY SSF82866 807 1031 3.01E-45 T 13-10-2018 Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 Gene3D G3DSA:3.30.2090.10 724 812 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 SUPERFAMILY SSF82714 723 810 9.16E-23 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_00321 f916f7251c2cf5f9feabaf3b5c59cad0 1043 SUPERFAMILY SSF82866 298 497 9.29E-48 T 13-10-2018 Y11_05161 11a8730a2c929309508b5cd96523cc53 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 3.0E-39 T 13-10-2018 IPR025730 Biofilm regulator BssS Y11_05161 11a8730a2c929309508b5cd96523cc53 84 Pfam PF13991 BssS protein family 11 80 2.0E-38 T 13-10-2018 IPR025730 Biofilm regulator BssS Y11_18861 9e3fd95d2009bef01e12c213ccb92d6e 483 PRINTS PR00313 NodO calcium binding signature 167 178 1.3E-12 T 13-10-2018 Y11_18861 9e3fd95d2009bef01e12c213ccb92d6e 483 PRINTS PR00313 NodO calcium binding signature 215 223 1.3E-12 T 13-10-2018 Y11_18861 9e3fd95d2009bef01e12c213ccb92d6e 483 PRINTS PR00313 NodO calcium binding signature 206 214 1.3E-12 T 13-10-2018 Y11_18861 9e3fd95d2009bef01e12c213ccb92d6e 483 PRINTS PR00313 NodO calcium binding signature 264 273 1.3E-12 T 13-10-2018 Y11_18861 9e3fd95d2009bef01e12c213ccb92d6e 483 Gene3D G3DSA:2.150.10.10 192 226 5.9E-6 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_18861 9e3fd95d2009bef01e12c213ccb92d6e 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 170 184 0.078 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Y11_18861 9e3fd95d2009bef01e12c213ccb92d6e 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 187 203 0.018 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Y11_18861 9e3fd95d2009bef01e12c213ccb92d6e 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 240 253 0.0047 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Y11_18861 9e3fd95d2009bef01e12c213ccb92d6e 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 255 270 0.96 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Y11_18861 9e3fd95d2009bef01e12c213ccb92d6e 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 151 168 2.3 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Y11_18861 9e3fd95d2009bef01e12c213ccb92d6e 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 205 222 0.0028 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Y11_18861 9e3fd95d2009bef01e12c213ccb92d6e 483 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 202 220 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Y11_18861 9e3fd95d2009bef01e12c213ccb92d6e 483 Gene3D G3DSA:2.150.10.10 236 375 7.6E-21 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_18861 9e3fd95d2009bef01e12c213ccb92d6e 483 Gene3D G3DSA:2.150.10.10 113 191 7.2E-11 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_18861 9e3fd95d2009bef01e12c213ccb92d6e 483 SUPERFAMILY SSF51120 149 302 7.25E-26 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_18861 9e3fd95d2009bef01e12c213ccb92d6e 483 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 193 211 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Y11_32811 3fda9daf32cf0360a89b79e758bae6a6 124 Gene3D G3DSA:2.40.50.140 1 124 1.2E-63 T 13-10-2018 Y11_32811 3fda9daf32cf0360a89b79e758bae6a6 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.507 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_32811 3fda9daf32cf0360a89b79e758bae6a6 124 SUPERFAMILY SSF50249 3 123 2.23E-52 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_32811 3fda9daf32cf0360a89b79e758bae6a6 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32811 3fda9daf32cf0360a89b79e758bae6a6 124 PIRSF PIRSF002133 1 124 1.9E-54 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32811 3fda9daf32cf0360a89b79e758bae6a6 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 7.5E-43 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32811 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.1E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32811 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.1E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32811 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.1E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32811 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.1E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32811 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.1E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32811 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.1E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32811 3fda9daf32cf0360a89b79e758bae6a6 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 9.8E-71 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_37781 b8f584fb60ad5995b3d7b2a2566ee4eb 466 Gene3D G3DSA:3.40.50.2000 242 435 4.1E-14 T 13-10-2018 Y11_37781 b8f584fb60ad5995b3d7b2a2566ee4eb 466 SUPERFAMILY SSF53756 117 429 6.75E-12 T 13-10-2018 Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.6E-11 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 Gene3D G3DSA:3.30.70.870 286 367 2.7E-35 T 13-10-2018 Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 Gene3D G3DSA:3.30.70.2570 479 553 6.1E-34 T 13-10-2018 IPR038363 LepA, C-terminal domain superfamily Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 2.1E-49 T 13-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 SUPERFAMILY SSF52540 2 234 1.83E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 169 3.7E-17 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.3E-52 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 Gene3D G3DSA:2.40.30.10 186 285 3.2E-34 T 13-10-2018 Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 Gene3D G3DSA:3.30.70.3380 368 478 1.0E-39 T 13-10-2018 Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 SUPERFAMILY SSF54980 292 370 2.48E-18 T 13-10-2018 IPR035647 EF-G domain III/V-like Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.0E-300 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 SUPERFAMILY SSF54980 399 493 1.01E-24 T 13-10-2018 IPR035647 EF-G domain III/V-like Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 307.989 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 Pfam PF00679 Elongation factor G C-terminus 399 482 7.8E-20 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Y11_42341 98fddce7f27f5eadbc24d5e410f9828a 599 Gene3D G3DSA:3.40.50.300 1 185 7.9E-71 T 13-10-2018 Y11_41661 5e4c0862e3428f2cbbbdde1224ef7bd2 111 SUPERFAMILY SSF159894 1 111 4.71E-58 T 13-10-2018 Y11_41661 5e4c0862e3428f2cbbbdde1224ef7bd2 111 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 1.3E-59 T 13-10-2018 IPR018994 Protein of unknown function DUF2002 Y11_41661 5e4c0862e3428f2cbbbdde1224ef7bd2 111 Gene3D G3DSA:3.90.1150.40 1 111 2.1E-56 T 13-10-2018 Y11_31591 dd44a5c2ba2b93a335782a2e5bb2b86b 306 Gene3D G3DSA:1.10.10.10 7 96 1.7E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_31591 dd44a5c2ba2b93a335782a2e5bb2b86b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_31591 dd44a5c2ba2b93a335782a2e5bb2b86b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_31591 dd44a5c2ba2b93a335782a2e5bb2b86b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_31591 dd44a5c2ba2b93a335782a2e5bb2b86b 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.6E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_31591 dd44a5c2ba2b93a335782a2e5bb2b86b 306 SUPERFAMILY SSF53850 94 297 8.32E-28 T 13-10-2018 Y11_31591 dd44a5c2ba2b93a335782a2e5bb2b86b 306 Pfam PF03466 LysR substrate binding domain 92 294 2.7E-29 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_31591 dd44a5c2ba2b93a335782a2e5bb2b86b 306 Gene3D G3DSA:3.40.190.10 101 291 1.5E-43 T 13-10-2018 Y11_31591 dd44a5c2ba2b93a335782a2e5bb2b86b 306 SUPERFAMILY SSF46785 3 83 3.25E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_31591 dd44a5c2ba2b93a335782a2e5bb2b86b 306 Gene3D G3DSA:3.40.190.10 164 266 1.5E-43 T 13-10-2018 Y11_38751 77cc5c21c07597dc2475893f8d5279e6 553 Gene3D G3DSA:3.40.190.10 113 321 6.7E-33 T 13-10-2018 Y11_38751 77cc5c21c07597dc2475893f8d5279e6 553 SUPERFAMILY SSF53850 117 550 9.59E-68 T 13-10-2018 Y11_38751 77cc5c21c07597dc2475893f8d5279e6 553 SUPERFAMILY SSF46785 4 56 1.96E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_38751 77cc5c21c07597dc2475893f8d5279e6 553 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 3.2E-43 T 13-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain Y11_38751 77cc5c21c07597dc2475893f8d5279e6 553 Hamap MF_01449 HTH-type transcriptional regulator SgrR [sgrR]. 1 553 67.522 T 13-10-2018 IPR023767 Transcriptional regulator SgrR Y11_38751 77cc5c21c07597dc2475893f8d5279e6 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 309 7.3E-20 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain Y11_29561 19221cded36e2a55129a09564bde52fe 500 Gene3D G3DSA:3.40.50.300 258 497 2.6E-47 T 13-10-2018 Y11_29561 19221cded36e2a55129a09564bde52fe 500 SUPERFAMILY SSF52540 3 231 2.66E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_29561 19221cded36e2a55129a09564bde52fe 500 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_29561 19221cded36e2a55129a09564bde52fe 500 SMART SM00382 29 225 7.0E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_29561 19221cded36e2a55129a09564bde52fe 500 SMART SM00382 277 473 2.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_29561 19221cded36e2a55129a09564bde52fe 500 Gene3D G3DSA:3.40.50.300 1 250 2.0E-53 T 13-10-2018 Y11_29561 19221cded36e2a55129a09564bde52fe 500 Pfam PF00005 ABC transporter 269 423 9.6E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_29561 19221cded36e2a55129a09564bde52fe 500 SUPERFAMILY SSF52540 267 482 9.87E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_29561 19221cded36e2a55129a09564bde52fe 500 Pfam PF00005 ABC transporter 22 169 9.9E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_26841 3859a880beb484dead8bb0e859337412 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_26841 3859a880beb484dead8bb0e859337412 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_12211 3859a880beb484dead8bb0e859337412 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_12211 3859a880beb484dead8bb0e859337412 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_24381 3859a880beb484dead8bb0e859337412 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_24381 3859a880beb484dead8bb0e859337412 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_04981 3859a880beb484dead8bb0e859337412 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_04981 3859a880beb484dead8bb0e859337412 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_40891 3859a880beb484dead8bb0e859337412 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_40891 3859a880beb484dead8bb0e859337412 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_00931 3859a880beb484dead8bb0e859337412 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_00931 3859a880beb484dead8bb0e859337412 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_31981 3859a880beb484dead8bb0e859337412 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_31981 3859a880beb484dead8bb0e859337412 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_26201 3859a880beb484dead8bb0e859337412 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_26201 3859a880beb484dead8bb0e859337412 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_40591 3859a880beb484dead8bb0e859337412 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_40591 3859a880beb484dead8bb0e859337412 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_34081 3859a880beb484dead8bb0e859337412 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_34081 3859a880beb484dead8bb0e859337412 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_27351 3859a880beb484dead8bb0e859337412 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_27351 3859a880beb484dead8bb0e859337412 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_20831 3859a880beb484dead8bb0e859337412 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_20831 3859a880beb484dead8bb0e859337412 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_10571 bc78b818006376e6073ce0fe59f1d8e6 103 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 21.78 T 13-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 Y11_10571 bc78b818006376e6073ce0fe59f1d8e6 103 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 86 4.4E-20 T 13-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 Y11_22151 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Gene3D G3DSA:3.30.70.1680 1 61 1.3E-31 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Y11_22151 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Y11_22151 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 59 17.134 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Y11_22151 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Y11_22151 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 59 1.3E-31 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Y11_22151 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Pfam PF02599 Global regulator protein family 1 52 2.5E-27 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Y11_p0631 69891a8b4a053efcb903897b38a25e9d 67 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 1 64 8.3E-24 T 13-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 Y11_p0631 69891a8b4a053efcb903897b38a25e9d 67 Gene3D G3DSA:1.20.5.420 2 66 5.6E-39 T 13-10-2018 Y11_p0631 69891a8b4a053efcb903897b38a25e9d 67 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 1 66 3.4E-28 T 13-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 Y11_34821 df7b37f4f63c18eed79715060cb56567 291 Gene3D G3DSA:3.90.78.10 168 291 3.7E-46 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_34821 df7b37f4f63c18eed79715060cb56567 291 Gene3D G3DSA:3.30.465.10 18 167 6.3E-54 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Y11_34821 df7b37f4f63c18eed79715060cb56567 291 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 155 278 1.7E-34 T 13-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_34821 df7b37f4f63c18eed79715060cb56567 291 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 291 77.13 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_34821 df7b37f4f63c18eed79715060cb56567 291 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 1 278 1.2E-93 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_34821 df7b37f4f63c18eed79715060cb56567 291 SUPERFAMILY SSF56194 151 288 5.23E-52 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_34821 df7b37f4f63c18eed79715060cb56567 291 Pfam PF01565 FAD binding domain 8 99 4.1E-16 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Y11_34821 df7b37f4f63c18eed79715060cb56567 291 SUPERFAMILY SSF56176 4 144 2.29E-33 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Y11_17651 10bf4bc5c71e234e03842958a78a77bc 371 Pfam PF00267 Gram-negative porin 27 371 2.6E-144 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_17651 10bf4bc5c71e234e03842958a78a77bc 371 SUPERFAMILY SSF56935 22 371 7.06E-78 T 13-10-2018 Y11_17651 10bf4bc5c71e234e03842958a78a77bc 371 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 326 342 - T 13-10-2018 IPR013793 Porin, Gram-negative type, conserved site Y11_17651 10bf4bc5c71e234e03842958a78a77bc 371 Gene3D G3DSA:2.40.160.10 22 371 1.7E-149 T 13-10-2018 IPR023614 Porin domain superfamily Y11_17651 10bf4bc5c71e234e03842958a78a77bc 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.7E-17 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_17651 10bf4bc5c71e234e03842958a78a77bc 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 1.7E-17 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_17651 10bf4bc5c71e234e03842958a78a77bc 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 1.7E-17 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_17651 10bf4bc5c71e234e03842958a78a77bc 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 326 343 1.7E-17 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_17651 10bf4bc5c71e234e03842958a78a77bc 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 236 248 1.7E-17 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_17651 10bf4bc5c71e234e03842958a78a77bc 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 5.5E-65 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_17651 10bf4bc5c71e234e03842958a78a77bc 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 242 259 5.5E-65 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_17651 10bf4bc5c71e234e03842958a78a77bc 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 5.5E-65 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_17651 10bf4bc5c71e234e03842958a78a77bc 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 5.5E-65 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_17651 10bf4bc5c71e234e03842958a78a77bc 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 5.5E-65 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_17651 10bf4bc5c71e234e03842958a78a77bc 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 282 301 5.5E-65 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_37281 8306d41ef426e8a84e6566488032d102 159 Gene3D G3DSA:3.30.70.970 11 141 1.3E-49 T 13-10-2018 IPR036701 RraB-like superfamily Y11_37281 8306d41ef426e8a84e6566488032d102 159 SUPERFAMILY SSF89946 16 139 7.98E-42 T 13-10-2018 IPR036701 RraB-like superfamily Y11_37281 8306d41ef426e8a84e6566488032d102 159 PIRSF PIRSF018193 17 159 1.3E-67 T 13-10-2018 IPR016716 Regulator of ribonuclease activity B Y11_37281 8306d41ef426e8a84e6566488032d102 159 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 20 133 30.852 T 13-10-2018 IPR016716 Regulator of ribonuclease activity B Y11_37281 8306d41ef426e8a84e6566488032d102 159 Pfam PF06877 Regulator of ribonuclease activity B 28 129 7.6E-34 T 13-10-2018 IPR009671 Regulator of ribonuclease activity B domain Y11_34771 f9eb79122c8e6b9eea083c69acc4bd0d 204 SUPERFAMILY SSF54211 2 130 8.34E-43 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_34771 f9eb79122c8e6b9eea083c69acc4bd0d 204 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 8.5E-29 T 13-10-2018 IPR001498 Impact, N-terminal Y11_34771 f9eb79122c8e6b9eea083c69acc4bd0d 204 SUPERFAMILY SSF54980 136 203 2.34E-17 T 13-10-2018 IPR035647 EF-G domain III/V-like Y11_34771 f9eb79122c8e6b9eea083c69acc4bd0d 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 13-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site Y11_34771 f9eb79122c8e6b9eea083c69acc4bd0d 204 Gene3D G3DSA:3.30.230.30 1 134 1.3E-52 T 13-10-2018 IPR036956 Impact, N-terminal domain superfamily Y11_34771 f9eb79122c8e6b9eea083c69acc4bd0d 204 Gene3D G3DSA:3.30.70.240 135 204 8.3E-31 T 13-10-2018 Y11_34771 f9eb79122c8e6b9eea083c69acc4bd0d 204 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 200 2.1E-75 T 13-10-2018 IPR015796 Impact family, bacterial/archaeal Y11_34771 f9eb79122c8e6b9eea083c69acc4bd0d 204 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 2.1E-15 T 13-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 6.5E-27 T 13-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 3.4E-27 T 13-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.5E-58 T 13-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Gene3D G3DSA:2.40.50.150 833 955 3.1E-44 T 13-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.319 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Gene3D G3DSA:3.90.1100.10 643 713 5.4E-21 T 13-10-2018 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Gene3D G3DSA:3.90.1100.10 441 624 1.9E-70 T 13-10-2018 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Gene3D G3DSA:3.90.1100.10 19 156 4.7E-49 T 13-10-2018 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Gene3D G3DSA:2.40.270.10 1009 1242 2.1E-92 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Gene3D G3DSA:2.40.270.10 790 832 5.4E-7 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 3.0E-160 T 13-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Gene3D G3DSA:3.90.1110.10 157 271 5.8E-28 T 13-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 13-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 240 1.4E-7 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 341 454 4.4E-16 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Gene3D G3DSA:2.40.50.100 714 788 6.9E-32 T 13-10-2018 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.5E-30 T 13-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Gene3D G3DSA:3.90.1800.10 1252 1306 8.1E-11 T 13-10-2018 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 Gene3D G3DSA:3.90.1110.10 317 440 3.4E-36 T 13-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34941 e1b6218c95ca5f3b8b0bc06a2b9f860f 1342 SUPERFAMILY SSF64484 11 1340 0.0 T 13-10-2018 Y11_11551 aa6c487dc131f752d618c5354b548f26 218 Gene3D G3DSA:3.90.850.10 1 218 2.2E-75 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Y11_11551 aa6c487dc131f752d618c5354b548f26 218 SUPERFAMILY SSF56529 11 211 1.57E-67 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Y11_11551 aa6c487dc131f752d618c5354b548f26 218 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 205 2.4E-53 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Y11_02121 a2e03fe231c6efaf623725a689e01c8d 197 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 1 193 45.425 T 13-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 Y11_02121 a2e03fe231c6efaf623725a689e01c8d 197 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 78 174 2.0E-48 T 13-10-2018 Y11_02121 a2e03fe231c6efaf623725a689e01c8d 197 Gene3D G3DSA:1.10.3210.10 1 196 5.4E-86 T 13-10-2018 Y11_02121 a2e03fe231c6efaf623725a689e01c8d 197 Pfam PF13023 HD domain 9 161 1.2E-17 T 13-10-2018 IPR006674 HD domain Y11_02121 a2e03fe231c6efaf623725a689e01c8d 197 SMART SM00471 24 149 7.3E-7 T 13-10-2018 IPR003607 HD/PDEase domain Y11_02121 a2e03fe231c6efaf623725a689e01c8d 197 SUPERFAMILY SSF109604 2 191 2.25E-44 T 13-10-2018 Y11_09101 2b3204a804cabce3f7a1bf36d26c1470 508 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 13-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 Y11_09101 2b3204a804cabce3f7a1bf36d26c1470 508 Gene3D G3DSA:3.40.50.720 3 365 2.4E-164 T 13-10-2018 Y11_09101 2b3204a804cabce3f7a1bf36d26c1470 508 SMART SM01002 146 311 5.8E-86 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Y11_09101 2b3204a804cabce3f7a1bf36d26c1470 508 PIRSF PIRSF000203 1 507 2.0E-279 T 13-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Y11_09101 2b3204a804cabce3f7a1bf36d26c1470 508 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 2.1E-75 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Y11_09101 2b3204a804cabce3f7a1bf36d26c1470 508 Gene3D G3DSA:3.40.50.720 137 318 2.4E-164 T 13-10-2018 Y11_09101 2b3204a804cabce3f7a1bf36d26c1470 508 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 13-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 Y11_09101 2b3204a804cabce3f7a1bf36d26c1470 508 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 8.3E-53 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Y11_09101 2b3204a804cabce3f7a1bf36d26c1470 508 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 425 507 5.3E-36 T 13-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Y11_09101 2b3204a804cabce3f7a1bf36d26c1470 508 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 508 6.0E-294 T 13-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Y11_09101 2b3204a804cabce3f7a1bf36d26c1470 508 SMART SM01003 4 137 1.7E-77 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Y11_09101 2b3204a804cabce3f7a1bf36d26c1470 508 SUPERFAMILY SSF52283 1 168 4.42E-58 T 13-10-2018 Y11_09101 2b3204a804cabce3f7a1bf36d26c1470 508 SUPERFAMILY SSF51735 137 317 1.09E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_12621 bb44ea3f8c25e9da619d779e303e504f 197 Pfam PF01195 Peptidyl-tRNA hydrolase 6 189 4.8E-52 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Y11_12621 bb44ea3f8c25e9da619d779e303e504f 197 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Y11_12621 bb44ea3f8c25e9da619d779e303e504f 197 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 35.184 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Y11_12621 bb44ea3f8c25e9da619d779e303e504f 197 SUPERFAMILY SSF53178 4 193 1.27E-68 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Y11_12621 bb44ea3f8c25e9da619d779e303e504f 197 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 191 1.1E-67 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Y11_12621 bb44ea3f8c25e9da619d779e303e504f 197 Gene3D G3DSA:3.40.50.1470 1 195 7.6E-71 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Y11_12621 bb44ea3f8c25e9da619d779e303e504f 197 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Y11_17401 ab8b4e33718677a5e2b9ebf16760808a 175 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 47 55 - T 13-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 Y11_17401 ab8b4e33718677a5e2b9ebf16760808a 175 Pfam PF13505 Outer membrane protein beta-barrel domain 9 175 1.4E-23 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel Y11_17401 ab8b4e33718677a5e2b9ebf16760808a 175 Gene3D G3DSA:2.40.160.20 25 175 8.5E-49 T 13-10-2018 Y11_17401 ab8b4e33718677a5e2b9ebf16760808a 175 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 87 110 4.5E-36 T 13-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 Y11_17401 ab8b4e33718677a5e2b9ebf16760808a 175 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 163 174 4.5E-36 T 13-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 Y11_17401 ab8b4e33718677a5e2b9ebf16760808a 175 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 46 58 4.5E-36 T 13-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 Y11_17401 ab8b4e33718677a5e2b9ebf16760808a 175 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 136 157 4.5E-36 T 13-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 Y11_17401 ab8b4e33718677a5e2b9ebf16760808a 175 SUPERFAMILY SSF56925 28 175 1.7E-30 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Y11_39901 47b000a972aa1a133d631973b7759fab 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 1.7E-81 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Y11_39901 47b000a972aa1a133d631973b7759fab 365 SUPERFAMILY SSF103025 3 277 6.44E-90 T 13-10-2018 Y11_39901 47b000a972aa1a133d631973b7759fab 365 Gene3D G3DSA:2.40.30.110 277 365 1.2E-33 T 13-10-2018 Y11_39901 47b000a972aa1a133d631973b7759fab 365 Gene3D G3DSA:3.30.70.1400 51 138 1.8E-85 T 13-10-2018 Y11_39901 47b000a972aa1a133d631973b7759fab 365 Gene3D G3DSA:4.10.1250.10 232 276 5.4E-26 T 13-10-2018 Y11_39901 47b000a972aa1a133d631973b7759fab 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 43.48 T 13-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Y11_39901 47b000a972aa1a133d631973b7759fab 365 Gene3D G3DSA:3.30.1360.120 6 231 1.8E-85 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Y11_39901 47b000a972aa1a133d631973b7759fab 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 353 5.2E-19 T 13-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Y11_39901 47b000a972aa1a133d631973b7759fab 365 PIRSF PIRSF006487 1 362 3.8E-79 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Y11_39901 47b000a972aa1a133d631973b7759fab 365 SUPERFAMILY SSF101790 270 360 8.99E-26 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Y11_39901 47b000a972aa1a133d631973b7759fab 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 358 1.9E-152 T 13-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Y11_32121 7e8f64588c0fe4b55cb9e222362336bf 336 SUPERFAMILY SSF48613 113 215 2.27E-8 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Y11_32121 7e8f64588c0fe4b55cb9e222362336bf 336 Gene3D G3DSA:1.20.910.10 95 316 2.3E-20 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Y11_26471 a7e518ede4b3b3c900546c3ebb48d6da 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 13 184 5.3E-55 T 13-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related Y11_26471 a7e518ede4b3b3c900546c3ebb48d6da 187 PIRSF PIRSF028513 1 187 7.9E-41 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 Y11_26471 a7e518ede4b3b3c900546c3ebb48d6da 187 Gene3D G3DSA:2.60.450.10 60 187 1.3E-50 T 13-10-2018 Y11_26471 a7e518ede4b3b3c900546c3ebb48d6da 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 7 183 3.2E-56 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 Y11_26471 a7e518ede4b3b3c900546c3ebb48d6da 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 186 27.879 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 Y11_31121 30d1a31473df0a99e9021d36391591cd 300 SUPERFAMILY SSF161098 93 280 1.57E-29 T 13-10-2018 IPR035906 MetI-like superfamily Y11_31121 30d1a31473df0a99e9021d36391591cd 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 3.3E-14 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Y11_31121 30d1a31473df0a99e9021d36391591cd 300 Gene3D G3DSA:1.10.3720.10 88 295 7.6E-24 T 13-10-2018 IPR035906 MetI-like superfamily Y11_31121 30d1a31473df0a99e9021d36391591cd 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 4.5E-30 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_42061 2413842674c34a0c2e872e893dd5172f 253 SUPERFAMILY SSF88713 1 253 1.18E-77 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Y11_42061 2413842674c34a0c2e872e893dd5172f 253 Gene3D G3DSA:3.20.20.370 1 253 4.4E-72 T 13-10-2018 Y11_42061 2413842674c34a0c2e872e893dd5172f 253 Pfam PF04794 YdjC-like protein 5 241 6.0E-63 T 13-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like Y11_42061 2413842674c34a0c2e872e893dd5172f 253 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 250 40.9 T 13-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 Y11_29791 ec4a2276ab1ff5cba4ab50555705cb8e 346 PIRSF PIRSF002756 1 338 1.8E-106 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Y11_29791 ec4a2276ab1ff5cba4ab50555705cb8e 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 1.8E-127 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Y11_29791 ec4a2276ab1ff5cba4ab50555705cb8e 346 Pfam PF12849 PBP superfamily domain 23 306 9.6E-61 T 13-10-2018 IPR024370 PBP domain Y11_29791 ec4a2276ab1ff5cba4ab50555705cb8e 346 Gene3D G3DSA:3.40.190.10 103 278 8.6E-129 T 13-10-2018 Y11_29791 ec4a2276ab1ff5cba4ab50555705cb8e 346 SUPERFAMILY SSF53850 28 339 8.28E-95 T 13-10-2018 Y11_29791 ec4a2276ab1ff5cba4ab50555705cb8e 346 Gene3D G3DSA:3.40.190.10 29 326 8.6E-129 T 13-10-2018 Y11_16171 2f57b35dffd6853f727abb6d6a249b73 554 ProDom PD025428 SUBUNIT GLYCEROL DEHYDRATASE LARGE LYASE DHAB ALPHA DIOL B12-DEPENDENT METABOLISM 8 549 0.0 T 13-10-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0016836|GO:0031419 Y11_16171 2f57b35dffd6853f727abb6d6a249b73 554 Pfam PF02286 Dehydratase large subunit 1 551 0.0 T 13-10-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0016836|GO:0031419 Y11_16171 2f57b35dffd6853f727abb6d6a249b73 554 PIRSF PIRSF018507 1 554 0.0 T 13-10-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0016836|GO:0031419 Y11_16171 2f57b35dffd6853f727abb6d6a249b73 554 Gene3D G3DSA:3.20.20.350 1 554 0.0 T 13-10-2018 IPR036999 Diol/glycerol dehydratase, large subunit superfamily GO:0016836|GO:0031419 Y11_16171 2f57b35dffd6853f727abb6d6a249b73 554 SUPERFAMILY SSF51703 1 553 2.0E-289 T 13-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Y11_05971 08b7db6a838b6cf9c9d9ec27916e1346 140 Pfam PF07007 Lysozyme inhibitor LprI 37 125 1.1E-23 T 13-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal Y11_05971 08b7db6a838b6cf9c9d9ec27916e1346 140 ProDom PD498860 RC0070 108 140 5.0E-4 T 13-10-2018 Y11_05971 08b7db6a838b6cf9c9d9ec27916e1346 140 Gene3D G3DSA:1.20.1270.180 28 138 4.3E-28 T 13-10-2018 Y11_03811 ea64100e811f66f600a44e5cb4c4362a 339 Gene3D G3DSA:3.90.1150.10 246 336 1.4E-27 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_03811 ea64100e811f66f600a44e5cb4c4362a 339 Gene3D G3DSA:3.40.640.10 1 245 3.3E-98 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_03811 ea64100e811f66f600a44e5cb4c4362a 339 Pfam PF01212 Beta-eliminating lyase 4 284 2.3E-95 T 13-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 Y11_03811 ea64100e811f66f600a44e5cb4c4362a 339 SUPERFAMILY SSF53383 3 336 8.74E-113 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_03811 ea64100e811f66f600a44e5cb4c4362a 339 PIRSF PIRSF017617 1 339 1.1E-129 T 13-10-2018 IPR023603 Threonine aldolase Y11_21251 413e831c228d875fa368eb9a9fdd2538 216 Gene3D G3DSA:3.40.1410.10 49 209 5.4E-37 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Y11_21251 413e831c228d875fa368eb9a9fdd2538 216 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 45 1.9E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_21251 413e831c228d875fa368eb9a9fdd2538 216 SUPERFAMILY SSF46785 2 47 1.63E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_21251 413e831c228d875fa368eb9a9fdd2538 216 SMART SM00345 1 45 1.0E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_21251 413e831c228d875fa368eb9a9fdd2538 216 SMART SM00866 66 205 2.0E-27 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Y11_21251 413e831c228d875fa368eb9a9fdd2538 216 Gene3D G3DSA:1.10.10.10 1 48 7.0E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_21251 413e831c228d875fa368eb9a9fdd2538 216 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 19 35 6.0E-10 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_21251 413e831c228d875fa368eb9a9fdd2538 216 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 5 19 6.0E-10 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_21251 413e831c228d875fa368eb9a9fdd2538 216 Pfam PF07702 UTRA domain 68 205 4.0E-28 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Y11_21251 413e831c228d875fa368eb9a9fdd2538 216 SUPERFAMILY SSF64288 33 212 4.87E-44 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Y11_39791 48d687a2defcbb04d97494d76841daf7 744 Gene3D G3DSA:3.30.70.260 663 743 2.5E-18 T 13-10-2018 Y11_39791 48d687a2defcbb04d97494d76841daf7 744 Gene3D G3DSA:1.10.3210.10 34 207 6.3E-39 T 13-10-2018 Y11_39791 48d687a2defcbb04d97494d76841daf7 744 SUPERFAMILY SSF109604 27 207 2.26E-45 T 13-10-2018 Y11_39791 48d687a2defcbb04d97494d76841daf7 744 SUPERFAMILY SSF81271 398 464 3.92E-22 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Y11_39791 48d687a2defcbb04d97494d76841daf7 744 SUPERFAMILY SSF55021 665 741 1.22E-13 T 13-10-2018 Y11_39791 48d687a2defcbb04d97494d76841daf7 744 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 2.3E-36 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 Y11_39791 48d687a2defcbb04d97494d76841daf7 744 Pfam PF13291 ACT domain 664 740 8.0E-18 T 13-10-2018 IPR002912 ACT domain Y11_39791 48d687a2defcbb04d97494d76841daf7 744 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 739 1.7E-187 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 Y11_39791 48d687a2defcbb04d97494d76841daf7 744 Gene3D G3DSA:3.30.460.10 209 341 7.0E-50 T 13-10-2018 Y11_39791 48d687a2defcbb04d97494d76841daf7 744 Pfam PF02824 TGS domain 405 464 7.5E-21 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Y11_39791 48d687a2defcbb04d97494d76841daf7 744 SMART SM00954 251 361 3.5E-66 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 Y11_39791 48d687a2defcbb04d97494d76841daf7 744 Pfam PF13328 HD domain 46 191 2.8E-41 T 13-10-2018 IPR003607 HD/PDEase domain Y11_39791 48d687a2defcbb04d97494d76841daf7 744 Gene3D G3DSA:3.10.20.30 399 472 5.6E-33 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Y11_39791 48d687a2defcbb04d97494d76841daf7 744 SUPERFAMILY SSF81301 196 409 1.8E-64 T 13-10-2018 Y11_26601 357a91484fe837afd1f11ceb203d25b6 478 SUPERFAMILY SSF56059 21 466 1.71E-64 T 13-10-2018 Y11_26601 357a91484fe837afd1f11ceb203d25b6 478 Pfam PF14403 Circularly permuted ATP-grasp type 2 78 451 2.2E-161 T 13-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 Y11_26601 357a91484fe837afd1f11ceb203d25b6 478 Gene3D G3DSA:3.30.1490.270 348 407 9.3E-25 T 13-10-2018 Y11_26601 357a91484fe837afd1f11ceb203d25b6 478 Gene3D G3DSA:3.40.50.11290 214 311 2.1E-40 T 13-10-2018 Y11_26601 357a91484fe837afd1f11ceb203d25b6 478 PIRSF PIRSF005522 1 478 3.0E-233 T 13-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 Y11_21661 c1573a0152895ee1f5ad81c61e435194 244 SUPERFAMILY SSF52540 3 236 3.94E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_21661 c1573a0152895ee1f5ad81c61e435194 244 SMART SM00382 28 215 4.8E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_21661 c1573a0152895ee1f5ad81c61e435194 244 Pfam PF00005 ABC transporter 19 167 1.1E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_21661 c1573a0152895ee1f5ad81c61e435194 244 PIRSF PIRSF039085 1 243 3.6E-111 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Y11_21661 c1573a0152895ee1f5ad81c61e435194 244 Gene3D G3DSA:3.40.50.300 2 244 1.5E-76 T 13-10-2018 Y11_21661 c1573a0152895ee1f5ad81c61e435194 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_22261 48a9fe8f8361b2afaad5c82f79a71030 814 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 731 758 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Y11_22261 48a9fe8f8361b2afaad5c82f79a71030 814 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 57 116 2.2E-16 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_22261 48a9fe8f8361b2afaad5c82f79a71030 814 Pfam PF00384 Molybdopterin oxidoreductase 119 576 4.9E-108 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_22261 48a9fe8f8361b2afaad5c82f79a71030 814 Gene3D G3DSA:2.40.40.20 670 814 2.7E-42 T 13-10-2018 Y11_22261 48a9fe8f8361b2afaad5c82f79a71030 814 Gene3D G3DSA:3.40.228.10 345 420 2.0E-18 T 13-10-2018 Y11_22261 48a9fe8f8361b2afaad5c82f79a71030 814 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 814 0.0 T 13-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 Y11_22261 48a9fe8f8361b2afaad5c82f79a71030 814 SUPERFAMILY SSF53706 57 697 9.55E-178 T 13-10-2018 Y11_22261 48a9fe8f8361b2afaad5c82f79a71030 814 SMART SM00926 56 116 1.9E-8 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_22261 48a9fe8f8361b2afaad5c82f79a71030 814 SUPERFAMILY SSF50692 687 814 8.14E-39 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Y11_22261 48a9fe8f8361b2afaad5c82f79a71030 814 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 61 79 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Y11_22261 48a9fe8f8361b2afaad5c82f79a71030 814 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 517 534 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Y11_22261 48a9fe8f8361b2afaad5c82f79a71030 814 Pfam PF01568 Molydopterin dinucleotide binding domain 695 806 1.9E-27 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Y11_22261 48a9fe8f8361b2afaad5c82f79a71030 814 Gene3D G3DSA:3.40.50.740 429 625 2.7E-51 T 13-10-2018 Y11_22261 48a9fe8f8361b2afaad5c82f79a71030 814 Gene3D G3DSA:3.40.50.740 54 322 2.4E-88 T 13-10-2018 Y11_27651 6d1c570d09164b75197865731d60ca23 822 PIRSF PIRSF500064 2 814 0.0 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 Y11_27651 6d1c570d09164b75197865731d60ca23 822 PIRSF PIRSF000437 19 810 0.0 T 13-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 Y11_27651 6d1c570d09164b75197865731d60ca23 822 Pfam PF01553 Acyltransferase 281 423 3.6E-26 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Y11_27651 6d1c570d09164b75197865731d60ca23 822 SMART SM00563 299 426 6.3E-28 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Y11_27651 6d1c570d09164b75197865731d60ca23 822 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 806 32.585 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 Y11_27651 6d1c570d09164b75197865731d60ca23 822 SUPERFAMILY SSF69593 270 487 7.19E-26 T 13-10-2018 Y11_27651 6d1c570d09164b75197865731d60ca23 822 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 798 0.0 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 Y11_28141 4630fa1398cb9b87177264ce97a337b3 811 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 16 454 1.5E-63 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Y11_28141 4630fa1398cb9b87177264ce97a337b3 811 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 655 677 - T 13-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Y11_28141 4630fa1398cb9b87177264ce97a337b3 811 ProSitePatterns PS00324 Aspartokinase signature. 15 23 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Y11_28141 4630fa1398cb9b87177264ce97a337b3 811 SUPERFAMILY SSF53633 13 300 8.5E-57 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Y11_28141 4630fa1398cb9b87177264ce97a337b3 811 Gene3D G3DSA:3.30.70.260 390 453 9.8E-6 T 13-10-2018 Y11_28141 4630fa1398cb9b87177264ce97a337b3 811 Pfam PF00696 Amino acid kinase family 13 285 6.5E-41 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Y11_28141 4630fa1398cb9b87177264ce97a337b3 811 SUPERFAMILY SSF55347 609 792 1.05E-46 T 13-10-2018 Y11_28141 4630fa1398cb9b87177264ce97a337b3 811 SUPERFAMILY SSF51735 458 631 1.86E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_28141 4630fa1398cb9b87177264ce97a337b3 811 Gene3D G3DSA:3.40.50.720 461 807 3.1E-104 T 13-10-2018 Y11_28141 4630fa1398cb9b87177264ce97a337b3 811 Gene3D G3DSA:1.20.120.1320 52 146 2.0E-73 T 13-10-2018 Y11_28141 4630fa1398cb9b87177264ce97a337b3 811 Gene3D G3DSA:3.30.360.10 620 790 3.1E-104 T 13-10-2018 Y11_28141 4630fa1398cb9b87177264ce97a337b3 811 Pfam PF00742 Homoserine dehydrogenase 609 804 3.1E-43 T 13-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Y11_28141 4630fa1398cb9b87177264ce97a337b3 811 Gene3D G3DSA:3.30.70.260 376 389 9.8E-6 T 13-10-2018 Y11_28141 4630fa1398cb9b87177264ce97a337b3 811 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 466 601 4.0E-22 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Y11_28141 4630fa1398cb9b87177264ce97a337b3 811 Gene3D G3DSA:3.40.1160.10 16 299 2.0E-73 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Y11_28141 4630fa1398cb9b87177264ce97a337b3 811 PIRSF PIRSF000727 13 811 2.3E-291 T 13-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Y11_23561 083d4df3aa436d842b95cf23c4e35d97 118 Pfam PF03400 IS1 transposase 1 118 7.1E-63 T 13-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 Y11_28921 728ce6904d65cbfc22a28a02818f05a7 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 7.3E-67 T 13-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Y11_28921 728ce6904d65cbfc22a28a02818f05a7 425 SUPERFAMILY SSF53756 57 420 4.55E-17 T 13-10-2018 Y11_28921 728ce6904d65cbfc22a28a02818f05a7 425 Gene3D G3DSA:3.40.50.2000 217 403 1.1E-66 T 13-10-2018 Y11_28921 728ce6904d65cbfc22a28a02818f05a7 425 Pfam PF00534 Glycosyl transferases group 1 248 398 3.1E-10 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Y11_28921 728ce6904d65cbfc22a28a02818f05a7 425 Gene3D G3DSA:3.40.50.11720 41 209 1.8E-47 T 13-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Y11_15241 36dc91625e8760e5ed1d0c580c6b7b5d 143 Gene3D G3DSA:3.40.930.10 1 143 1.7E-29 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Y11_15241 36dc91625e8760e5ed1d0c580c6b7b5d 143 SUPERFAMILY SSF55804 4 141 1.57E-27 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Y11_15241 36dc91625e8760e5ed1d0c580c6b7b5d 143 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 142 2.4E-22 T 13-10-2018 IPR002178 PTS EIIA type-2 domain Y11_21461 96075bf3933ac53bc929787b1d74a5ff 447 Pfam PF11973 NQRA C-terminal domain 262 310 8.1E-22 T 13-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 Y11_21461 96075bf3933ac53bc929787b1d74a5ff 447 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 447 1.7E-186 T 13-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 Y11_21461 96075bf3933ac53bc929787b1d74a5ff 447 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 447 47.348 T 13-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 Y11_21461 96075bf3933ac53bc929787b1d74a5ff 447 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 257 2.0E-118 T 13-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 Y11_23611 f0461e06418a3614c0e162935d75a1e8 720 SUPERFAMILY SSF52172 1 108 6.96E-35 T 13-10-2018 IPR011006 CheY-like superfamily Y11_23611 f0461e06418a3614c0e162935d75a1e8 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 551 3.0E-194 T 13-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Y11_23611 f0461e06418a3614c0e162935d75a1e8 720 Gene3D G3DSA:3.40.640.10 109 420 5.0E-86 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_23611 f0461e06418a3614c0e162935d75a1e8 720 SUPERFAMILY SSF53383 109 567 5.95E-121 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_23611 f0461e06418a3614c0e162935d75a1e8 720 PIRSF PIRSF009393 1 720 1.5E-291 T 13-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 Y11_23611 f0461e06418a3614c0e162935d75a1e8 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 13-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Y11_23611 f0461e06418a3614c0e162935d75a1e8 720 Gene3D G3DSA:3.90.1150.10 421 600 1.2E-72 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_23611 f0461e06418a3614c0e162935d75a1e8 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 719 0.0 T 13-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 Y11_23611 f0461e06418a3614c0e162935d75a1e8 720 SUPERFAMILY SSF55904 571 719 6.15E-47 T 13-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 Y11_23611 f0461e06418a3614c0e162935d75a1e8 720 Gene3D G3DSA:3.90.100.10 601 720 1.5E-44 T 13-10-2018 Y11_23611 f0461e06418a3614c0e162935d75a1e8 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 5 103 8.8E-24 T 13-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 Y11_23611 f0461e06418a3614c0e162935d75a1e8 720 Gene3D G3DSA:3.40.50.220 1 108 6.9E-28 T 13-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 Y11_23611 f0461e06418a3614c0e162935d75a1e8 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 705 2.6E-49 T 13-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 Y11_16991 f9ebe9595258d3cfd57c4204cb925de2 115 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 115 18.956 T 13-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Y11_16991 f9ebe9595258d3cfd57c4204cb925de2 115 PIRSF PIRSF004761 1 115 4.2E-31 T 13-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Y11_16991 f9ebe9595258d3cfd57c4204cb925de2 115 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 13-10-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site Y11_16991 f9ebe9595258d3cfd57c4204cb925de2 115 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 115 2.4E-34 T 13-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Y11_16991 f9ebe9595258d3cfd57c4204cb925de2 115 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 114 2.8E-27 T 13-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Y11_16991 f9ebe9595258d3cfd57c4204cb925de2 115 Gene3D G3DSA:3.30.2320.80 1 115 3.7E-24 T 13-10-2018 Y11_22561 ca73688c1b77694069d134896baf488b 391 Gene3D G3DSA:2.40.30.170 54 319 2.6E-81 T 13-10-2018 Y11_22561 ca73688c1b77694069d134896baf488b 391 SUPERFAMILY SSF111369 57 242 7.19E-23 T 13-10-2018 Y11_22561 ca73688c1b77694069d134896baf488b 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 383 2.7E-41 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Y11_22561 ca73688c1b77694069d134896baf488b 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 269 2.6E-14 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Y11_22561 ca73688c1b77694069d134896baf488b 391 Gene3D G3DSA:2.40.50.100 65 227 2.6E-81 T 13-10-2018 Y11_22561 ca73688c1b77694069d134896baf488b 391 Gene3D G3DSA:1.10.287.470 99 190 2.6E-81 T 13-10-2018 Y11_22561 ca73688c1b77694069d134896baf488b 391 Gene3D G3DSA:2.40.420.20 49 379 2.6E-81 T 13-10-2018 Y11_35821 4caf7f120633e5ad04d3e80805d23b04 336 Gene3D G3DSA:3.40.50.10350 226 308 7.3E-119 T 13-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold Y11_35821 4caf7f120633e5ad04d3e80805d23b04 336 Gene3D G3DSA:3.90.1510.10 2 225 7.3E-119 T 13-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 Y11_35821 4caf7f120633e5ad04d3e80805d23b04 336 SUPERFAMILY SSF110738 1 324 2.88E-116 T 13-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 Y11_35821 4caf7f120633e5ad04d3e80805d23b04 336 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 1 324 3.8E-139 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 Y11_35821 4caf7f120633e5ad04d3e80805d23b04 336 PIRSF PIRSF006078 1 326 7.1E-117 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 Y11_35821 4caf7f120633e5ad04d3e80805d23b04 336 Pfam PF02595 Glycerate kinase family 1 322 7.1E-126 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 Y11_05871 31cb8cb3701c9bd726a2b4907d1ce9cf 441 Gene3D G3DSA:3.40.640.10 17 301 1.0E-107 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_05871 31cb8cb3701c9bd726a2b4907d1ce9cf 441 SUPERFAMILY SSF53383 17 437 1.45E-133 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_05871 31cb8cb3701c9bd726a2b4907d1ce9cf 441 Gene3D G3DSA:3.90.1150.10 305 441 2.0E-50 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_05871 31cb8cb3701c9bd726a2b4907d1ce9cf 441 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 212 226 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Y11_05871 31cb8cb3701c9bd726a2b4907d1ce9cf 441 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 20 436 3.4E-143 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Y11_05871 31cb8cb3701c9bd726a2b4907d1ce9cf 441 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 18 436 6.2E-207 T 13-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 Y11_05871 31cb8cb3701c9bd726a2b4907d1ce9cf 441 PIRSF PIRSF001434 12 440 2.5E-132 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Y11_16131 b923271b1b5cda530677a62a4d211f63 300 Pfam PF12833 Helix-turn-helix domain 214 290 8.4E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_16131 b923271b1b5cda530677a62a4d211f63 300 Pfam PF10114 Sensory domain found in PocR 7 164 1.7E-42 T 13-10-2018 IPR018771 PocR domain Y11_16131 b923271b1b5cda530677a62a4d211f63 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 2.3E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_16131 b923271b1b5cda530677a62a4d211f63 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 2.3E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_16131 b923271b1b5cda530677a62a4d211f63 300 SUPERFAMILY SSF46689 190 241 1.22E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_16131 b923271b1b5cda530677a62a4d211f63 300 SMART SM00342 207 290 2.2E-34 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_16131 b923271b1b5cda530677a62a4d211f63 300 SUPERFAMILY SSF46689 244 291 8.96E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_16131 b923271b1b5cda530677a62a4d211f63 300 Gene3D G3DSA:1.10.10.60 240 295 4.0E-17 T 13-10-2018 Y11_16131 b923271b1b5cda530677a62a4d211f63 300 Gene3D G3DSA:1.10.10.60 189 239 1.1E-16 T 13-10-2018 Y11_27121 bfcdbd440d47bd948706e078df92a209 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 8 154 3.7E-44 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Y11_27121 bfcdbd440d47bd948706e078df92a209 162 PIRSF PIRSF018472 1 162 1.9E-58 T 13-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type Y11_27121 bfcdbd440d47bd948706e078df92a209 162 Pfam PF04093 rod shape-determining protein MreD 6 154 2.7E-43 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Y11_00921 d21766f418f8b2da4c7f7e701a73bb4e 323 SUPERFAMILY SSF53067 4 319 2.14E-64 T 13-10-2018 Y11_00921 d21766f418f8b2da4c7f7e701a73bb4e 323 TIGRFAM TIGR00749 glk: glucokinase 6 310 1.5E-140 T 13-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 Y11_00921 d21766f418f8b2da4c7f7e701a73bb4e 323 Pfam PF02685 Glucokinase 6 315 5.3E-125 T 13-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 Y11_00921 d21766f418f8b2da4c7f7e701a73bb4e 323 Gene3D G3DSA:3.30.420.40 6 308 2.0E-118 T 13-10-2018 Y11_00921 d21766f418f8b2da4c7f7e701a73bb4e 323 Gene3D G3DSA:3.40.367.20 100 299 2.0E-118 T 13-10-2018 Y11_00921 d21766f418f8b2da4c7f7e701a73bb4e 323 Hamap MF_00524 Glucokinase [glk]. 4 316 36.019 T 13-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 Y11_39761 fd59459bf5b0faddfb197c6289127202 105 Gene3D G3DSA:1.20.120.160 1 103 2.2E-27 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Y11_39761 fd59459bf5b0faddfb197c6289127202 105 Pfam PF01627 Hpt domain 13 93 2.3E-13 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Y11_39761 fd59459bf5b0faddfb197c6289127202 105 SUPERFAMILY SSF47226 6 102 1.83E-18 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Y11_39761 fd59459bf5b0faddfb197c6289127202 105 SMART SM00073 3 95 6.8E-5 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Y11_15351 1aa15b606a4c996f53d73f9f0b7917c8 297 SUPERFAMILY SSF51621 7 240 1.54E-60 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Y11_15351 1aa15b606a4c996f53d73f9f0b7917c8 297 Gene3D G3DSA:3.20.20.60 1 293 3.2E-87 T 13-10-2018 Y11_15351 1aa15b606a4c996f53d73f9f0b7917c8 297 PIRSF PIRSF015582 2 296 8.6E-75 T 13-10-2018 IPR011206 Citrate lyase beta subunit-like Y11_15351 1aa15b606a4c996f53d73f9f0b7917c8 297 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 11 230 5.7E-79 T 13-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 Y11_08481 1a672fa24ff2a5cf036dddce1c689c04 105 Gene3D G3DSA:2.40.128.200 27 104 2.5E-26 T 13-10-2018 IPR036328 C-type lysozyme inhibitor superfamily Y11_08481 1a672fa24ff2a5cf036dddce1c689c04 105 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 34 95 5.3E-17 T 13-10-2018 IPR018660 C-type lysozyme inhibitor Y11_08481 1a672fa24ff2a5cf036dddce1c689c04 105 SUPERFAMILY SSF141488 29 102 1.44E-23 T 13-10-2018 IPR036328 C-type lysozyme inhibitor superfamily Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 SUPERFAMILY SSF52540 6 219 1.19E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 SUPERFAMILY SSF50447 205 301 1.87E-30 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.3E-14 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.5E-33 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 5.2E-17 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.4E-58 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 Gene3D G3DSA:2.40.30.10 206 334 3.2E-53 T 13-10-2018 Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.7E-236 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 SUPERFAMILY SSF50465 298 393 4.89E-36 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.0E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.0E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.0E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.0E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.0E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 Gene3D G3DSA:3.40.50.300 1 203 4.0E-70 T 13-10-2018 Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 Gene3D G3DSA:2.40.30.10 338 393 1.7E-29 T 13-10-2018 Y11_32841 d65a4bf736e5ed42ed548aa96341d0af 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.592 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Y11_18881 a8e74ad94454193e4c573071145e8b7c 179 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 179 42.096 T 13-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 Y11_18881 a8e74ad94454193e4c573071145e8b7c 179 Gene3D G3DSA:1.10.1220.10 1 40 3.2E-24 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Y11_18881 a8e74ad94454193e4c573071145e8b7c 179 SUPERFAMILY SSF47598 1 35 7.67E-14 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Y11_18881 a8e74ad94454193e4c573071145e8b7c 179 SUPERFAMILY SSF82808 64 179 9.68E-48 T 13-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 Y11_18881 a8e74ad94454193e4c573071145e8b7c 179 PIRSF PIRSF019401 1 179 2.9E-47 T 13-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 Y11_18881 a8e74ad94454193e4c573071145e8b7c 179 Pfam PF17206 SeqA protein N-terminal domain 1 36 6.4E-24 T 13-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal Y11_18881 a8e74ad94454193e4c573071145e8b7c 179 Gene3D G3DSA:1.20.1380.10 66 179 3.8E-45 T 13-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 Y11_18881 a8e74ad94454193e4c573071145e8b7c 179 Pfam PF03925 SeqA protein C-terminal domain 69 177 1.7E-47 T 13-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 Y11_33641 2640dcc4be69575fea08f75e6bf86828 428 SMART SM00490 270 351 4.5E-30 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_33641 2640dcc4be69575fea08f75e6bf86828 428 SUPERFAMILY SSF52540 84 363 1.22E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_33641 2640dcc4be69575fea08f75e6bf86828 428 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.581 T 13-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 Y11_33641 2640dcc4be69575fea08f75e6bf86828 428 Pfam PF00271 Helicase conserved C-terminal domain 243 351 2.4E-28 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_33641 2640dcc4be69575fea08f75e6bf86828 428 Gene3D G3DSA:3.40.50.300 2 222 7.1E-68 T 13-10-2018 Y11_33641 2640dcc4be69575fea08f75e6bf86828 428 Pfam PF00270 DEAD/DEAH box helicase 33 206 5.9E-45 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Y11_33641 2640dcc4be69575fea08f75e6bf86828 428 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Y11_33641 2640dcc4be69575fea08f75e6bf86828 428 Gene3D G3DSA:3.40.50.300 227 393 1.4E-44 T 13-10-2018 Y11_33641 2640dcc4be69575fea08f75e6bf86828 428 SMART SM00487 28 234 2.0E-50 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Y11_18341 ecfe49421c6697a20c64f09c8b0fab9e 354 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 178 187 - T 13-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 Y11_18341 ecfe49421c6697a20c64f09c8b0fab9e 354 SUPERFAMILY SSF74650 15 351 2.57E-107 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Y11_18341 ecfe49421c6697a20c64f09c8b0fab9e 354 Gene3D G3DSA:2.70.98.10 15 352 6.4E-116 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Y11_18341 ecfe49421c6697a20c64f09c8b0fab9e 354 Pfam PF01263 Aldose 1-epimerase 25 350 4.0E-85 T 13-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 Y11_18341 ecfe49421c6697a20c64f09c8b0fab9e 354 PIRSF PIRSF005096 6 354 2.3E-121 T 13-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 Y11_18341 ecfe49421c6697a20c64f09c8b0fab9e 354 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 19 351 1.7E-140 T 13-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 Y11_32371 3376a8cba567119a650c96bbe0d51b85 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 3.5E-93 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Y11_32371 3376a8cba567119a650c96bbe0d51b85 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Y11_32371 3376a8cba567119a650c96bbe0d51b85 225 SUPERFAMILY SSF51366 3 218 5.23E-76 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Y11_32371 3376a8cba567119a650c96bbe0d51b85 225 Gene3D G3DSA:3.20.20.70 4 221 7.8E-84 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_32371 3376a8cba567119a650c96bbe0d51b85 225 PIRSF PIRSF001461 1 225 3.9E-106 T 13-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Y11_32371 3376a8cba567119a650c96bbe0d51b85 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 2.6E-98 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Y11_32371 3376a8cba567119a650c96bbe0d51b85 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Y11_11931 1aa1ccac1551da83ffbfce541c82f8d8 266 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 23 261 4.2E-125 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 Y11_11931 1aa1ccac1551da83ffbfce541c82f8d8 266 SUPERFAMILY SSF53335 39 261 2.17E-39 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_11931 1aa1ccac1551da83ffbfce541c82f8d8 266 Gene3D G3DSA:3.40.50.150 37 266 5.3E-66 T 13-10-2018 Y11_11931 1aa1ccac1551da83ffbfce541c82f8d8 266 Pfam PF13649 Methyltransferase domain 79 177 9.3E-14 T 13-10-2018 Y11_11931 1aa1ccac1551da83ffbfce541c82f8d8 266 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 22 261 42.708 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 Y11_11931 1aa1ccac1551da83ffbfce541c82f8d8 266 PIRSF PIRSF006325 20 262 1.1E-131 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 Y11_17831 b79b161fdd2f4dc9f02511b2c5963101 422 Gene3D G3DSA:3.40.50.2300 33 375 1.3E-138 T 13-10-2018 Y11_17831 b79b161fdd2f4dc9f02511b2c5963101 422 Pfam PF13433 Periplasmic binding protein domain 31 406 4.1E-171 T 13-10-2018 Y11_17831 b79b161fdd2f4dc9f02511b2c5963101 422 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 3.6E-178 T 13-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like Y11_17831 b79b161fdd2f4dc9f02511b2c5963101 422 Gene3D G3DSA:3.40.50.2300 146 395 1.3E-138 T 13-10-2018 Y11_17831 b79b161fdd2f4dc9f02511b2c5963101 422 SUPERFAMILY SSF53822 30 408 2.83E-90 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_17831 b79b161fdd2f4dc9f02511b2c5963101 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 5.1E-5 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Y11_17831 b79b161fdd2f4dc9f02511b2c5963101 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 290 303 5.1E-5 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Y11_17831 b79b161fdd2f4dc9f02511b2c5963101 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 5.1E-5 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Y11_29071 f96e35791791a372453e227258dc6abc 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 6.6E-42 T 13-10-2018 IPR013527 YicC-like, N-terminal Y11_29071 f96e35791791a372453e227258dc6abc 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 1.3E-128 T 13-10-2018 IPR005229 Conserved hypothetical protein CHP00255 Y11_29071 f96e35791791a372453e227258dc6abc 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.7E-34 T 13-10-2018 IPR013551 Domain of unknown function DUF1732 Y11_38091 ce3a2fea737e98fddcb71bbd4f9f12df 225 Pfam PF10144 Bacterial virulence factor haemolysin 1 162 3.1E-66 T 13-10-2018 IPR019305 Uncharacterised protein family Smp Y11_14421 864451aeccd1afd432531b0cf7784a60 228 Gene3D G3DSA:2.60.40.4070 104 194 7.7E-35 T 13-10-2018 Y11_14421 864451aeccd1afd432531b0cf7784a60 228 Pfam PF13861 FlgD Tudor-like domain 87 225 9.1E-19 T 13-10-2018 IPR025963 FlgD Tudor-like domain Y11_14421 864451aeccd1afd432531b0cf7784a60 228 Gene3D G3DSA:2.30.30.910 88 222 7.7E-35 T 13-10-2018 Y11_14421 864451aeccd1afd432531b0cf7784a60 228 Pfam PF13860 FlgD Ig-like domain 117 186 9.3E-22 T 13-10-2018 IPR025965 FlgD Ig-like domain Y11_14421 864451aeccd1afd432531b0cf7784a60 228 Pfam PF03963 Flagellar hook capping protein - N-terminal region 13 79 3.2E-23 T 13-10-2018 IPR005648 Flagellar hook capping protein Y11_20321 698aa3c6fda474dff1c642806d05cbe6 122 Pfam PF10757 Biofilm formation regulator YbaJ 1 118 2.8E-65 T 13-10-2018 IPR019693 Biofilm formation regulator YbaJ Y11_07981 a50e02de43c2dd775c845fad2abac5c3 382 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 373 1.1E-126 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Y11_07981 a50e02de43c2dd775c845fad2abac5c3 382 PIRSF PIRSF000390 1 380 9.6E-109 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Y11_07981 a50e02de43c2dd775c845fad2abac5c3 382 Gene3D G3DSA:3.90.1150.10 253 379 5.7E-37 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_07981 a50e02de43c2dd775c845fad2abac5c3 382 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 70.97 T 13-10-2018 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 Y11_07981 a50e02de43c2dd775c845fad2abac5c3 382 SUPERFAMILY SSF53383 4 376 1.13E-111 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_07981 a50e02de43c2dd775c845fad2abac5c3 382 Gene3D G3DSA:3.40.640.10 1 252 5.6E-93 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 205.698 T 13-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 Gene3D G3DSA:3.30.930.10 2 252 1.6E-122 T 13-10-2018 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 2.1E-33 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 2.1E-33 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 2.1E-33 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 2.1E-33 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 2.1E-33 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 Gene3D G3DSA:3.30.980.10 563 697 3.6E-51 T 13-10-2018 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 Gene3D G3DSA:3.10.310.40 764 872 1.5E-35 T 13-10-2018 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 9.0E-17 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 SMART SM00863 653 696 2.5E-20 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 Pfam PF01411 tRNA synthetases class II (A) 7 554 1.9E-233 T 13-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 SUPERFAMILY SSF55186 552 711 1.02E-52 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 SUPERFAMILY SSF50447 456 552 3.46E-18 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 Gene3D G3DSA:2.40.30.130 462 552 4.3E-10 T 13-10-2018 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 SUPERFAMILY SSF101353 256 465 1.24E-61 T 13-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 Pfam PF02272 DHHA1 domain 732 871 2.6E-30 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 SUPERFAMILY SSF55681 4 255 1.79E-107 T 13-10-2018 Y11_22161 4dfa7e5409c4f1f894fee4f53badb198 875 Gene3D G3DSA:3.30.54.20 624 677 3.6E-51 T 13-10-2018 Y11_10291 a3586a048938ea01670d753ee74a1395 209 PIRSF PIRSF006091 1 202 2.3E-72 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Y11_10291 a3586a048938ea01670d753ee74a1395 209 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 26.82 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Y11_10291 a3586a048938ea01670d753ee74a1395 209 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 9.4E-67 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Y11_10291 a3586a048938ea01670d753ee74a1395 209 SMART SM00900 100 192 1.7E-34 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Y11_10291 a3586a048938ea01670d753ee74a1395 209 Pfam PF04205 FMN-binding domain 100 187 3.7E-17 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Y11_29631 5330852fe23802c941bd62133cad0f64 153 SMART SM00344 7 114 6.7E-44 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Y11_29631 5330852fe23802c941bd62133cad0f64 153 Pfam PF01037 Lrp/AsnC ligand binding domain 77 144 4.5E-17 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Y11_29631 5330852fe23802c941bd62133cad0f64 153 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 8.9E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Y11_29631 5330852fe23802c941bd62133cad0f64 153 Gene3D G3DSA:1.10.10.10 3 57 1.0E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_29631 5330852fe23802c941bd62133cad0f64 153 SUPERFAMILY SSF54909 68 153 2.15E-19 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Y11_29631 5330852fe23802c941bd62133cad0f64 153 SUPERFAMILY SSF46785 5 67 7.93E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_29631 5330852fe23802c941bd62133cad0f64 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 3.4E-14 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Y11_29631 5330852fe23802c941bd62133cad0f64 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 3.4E-14 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Y11_29631 5330852fe23802c941bd62133cad0f64 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 3.4E-14 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Y11_29631 5330852fe23802c941bd62133cad0f64 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Y11_29631 5330852fe23802c941bd62133cad0f64 153 Gene3D G3DSA:3.30.70.920 59 141 9.0E-36 T 13-10-2018 Y11_38331 34618ac103dc9c50e70929f62bd76eda 429 TIGRFAM TIGR00260 thrC: threonine synthase 53 396 4.9E-119 T 13-10-2018 IPR004450 Threonine synthase-like Y11_38331 34618ac103dc9c50e70929f62bd76eda 429 Gene3D G3DSA:3.40.50.1100 85 394 1.1E-140 T 13-10-2018 Y11_38331 34618ac103dc9c50e70929f62bd76eda 429 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 96 370 1.5E-23 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Y11_38331 34618ac103dc9c50e70929f62bd76eda 429 Pfam PF14821 Threonine synthase N terminus 8 80 5.0E-11 T 13-10-2018 IPR029144 Threonine synthase, N-terminal Y11_38331 34618ac103dc9c50e70929f62bd76eda 429 SUPERFAMILY SSF53686 1 426 4.19E-132 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y11_38331 34618ac103dc9c50e70929f62bd76eda 429 Gene3D G3DSA:3.40.50.1100 103 401 1.1E-140 T 13-10-2018 Y11_38331 34618ac103dc9c50e70929f62bd76eda 429 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Y11_38331 34618ac103dc9c50e70929f62bd76eda 429 Gene3D G3DSA:3.90.1380.10 1 81 3.5E-34 T 13-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily Y11_08671 9ac10c4b08f07d6c470d925f658f49a4 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_08671 9ac10c4b08f07d6c470d925f658f49a4 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 1.1E-25 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_15021 1fd3cafbdeace67adb1889df657b30d7 300 SUPERFAMILY SSF53850 91 271 2.67E-24 T 13-10-2018 Y11_15021 1fd3cafbdeace67adb1889df657b30d7 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_15021 1fd3cafbdeace67adb1889df657b30d7 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_15021 1fd3cafbdeace67adb1889df657b30d7 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_15021 1fd3cafbdeace67adb1889df657b30d7 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.0E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_15021 1fd3cafbdeace67adb1889df657b30d7 300 Gene3D G3DSA:3.40.190.10 94 271 2.9E-32 T 13-10-2018 Y11_15021 1fd3cafbdeace67adb1889df657b30d7 300 Pfam PF03466 LysR substrate binding domain 88 271 1.8E-25 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_15021 1fd3cafbdeace67adb1889df657b30d7 300 Gene3D G3DSA:3.40.190.10 161 263 2.9E-32 T 13-10-2018 Y11_15021 1fd3cafbdeace67adb1889df657b30d7 300 SUPERFAMILY SSF46785 2 84 1.09E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_15021 1fd3cafbdeace67adb1889df657b30d7 300 Gene3D G3DSA:1.10.10.10 1 93 4.9E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_32471 be86541d4583b59464bafffe62d9ae51 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.5E-19 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_32471 be86541d4583b59464bafffe62d9ae51 326 SUPERFAMILY SSF47413 1 59 7.51E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_32471 be86541d4583b59464bafffe62d9ae51 326 Gene3D G3DSA:1.10.260.40 1 54 5.6E-23 T 13-10-2018 Y11_32471 be86541d4583b59464bafffe62d9ae51 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 Y11_32471 be86541d4583b59464bafffe62d9ae51 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.3E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_32471 be86541d4583b59464bafffe62d9ae51 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.3E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_32471 be86541d4583b59464bafffe62d9ae51 326 Gene3D G3DSA:3.40.50.2300 55 303 6.1E-65 T 13-10-2018 Y11_32471 be86541d4583b59464bafffe62d9ae51 326 Gene3D G3DSA:3.40.50.2300 160 287 6.1E-65 T 13-10-2018 Y11_32471 be86541d4583b59464bafffe62d9ae51 326 Pfam PF13377 Periplasmic binding protein-like domain 169 321 1.6E-30 T 13-10-2018 Y11_32471 be86541d4583b59464bafffe62d9ae51 326 SMART SM00354 1 71 3.0E-30 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_32471 be86541d4583b59464bafffe62d9ae51 326 SUPERFAMILY SSF53822 61 324 7.66E-68 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_41101 508e3e1c6b75cf3975bfdbe14ee550da 794 Pfam PF07244 Surface antigen variable number repeat 92 172 1.8E-11 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Y11_41101 508e3e1c6b75cf3975bfdbe14ee550da 794 Pfam PF07244 Surface antigen variable number repeat 266 344 7.6E-12 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Y11_41101 508e3e1c6b75cf3975bfdbe14ee550da 794 Pfam PF07244 Surface antigen variable number repeat 176 263 2.5E-15 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Y11_41101 508e3e1c6b75cf3975bfdbe14ee550da 794 Pfam PF07244 Surface antigen variable number repeat 348 421 7.4E-15 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Y11_41101 508e3e1c6b75cf3975bfdbe14ee550da 794 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 794 26.107 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Y11_41101 508e3e1c6b75cf3975bfdbe14ee550da 794 Pfam PF01103 Surface antigen 448 794 2.8E-101 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Y11_41101 508e3e1c6b75cf3975bfdbe14ee550da 794 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 794 1.6E-284 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Y11_41101 508e3e1c6b75cf3975bfdbe14ee550da 794 Gene3D G3DSA:3.10.20.310 92 174 3.7E-16 T 13-10-2018 Y11_41101 508e3e1c6b75cf3975bfdbe14ee550da 794 Gene3D G3DSA:3.10.20.310 265 346 1.2E-16 T 13-10-2018 Y11_41101 508e3e1c6b75cf3975bfdbe14ee550da 794 Gene3D G3DSA:3.10.20.310 19 91 2.1E-20 T 13-10-2018 Y11_41101 508e3e1c6b75cf3975bfdbe14ee550da 794 Gene3D G3DSA:2.40.160.50 426 794 1.8E-143 T 13-10-2018 Y11_41101 508e3e1c6b75cf3975bfdbe14ee550da 794 PIRSF PIRSF006076 1 794 1.9E-256 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Y11_41101 508e3e1c6b75cf3975bfdbe14ee550da 794 Gene3D G3DSA:3.10.20.310 175 264 2.2E-23 T 13-10-2018 Y11_41101 508e3e1c6b75cf3975bfdbe14ee550da 794 Gene3D G3DSA:3.10.20.310 347 425 8.8E-26 T 13-10-2018 Y11_38171 586c173c07d82b32d32a905617fa26e2 548 Pfam PF00005 ABC transporter 15 184 3.5E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_38171 586c173c07d82b32d32a905617fa26e2 548 Pfam PF00005 ABC transporter 333 466 1.2E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_38171 586c173c07d82b32d32a905617fa26e2 548 Pfam PF12848 ABC transporter 223 299 1.4E-11 T 13-10-2018 IPR032781 ABC-transporter extension domain Y11_38171 586c173c07d82b32d32a905617fa26e2 548 Gene3D G3DSA:3.40.50.300 1 278 1.9E-86 T 13-10-2018 Y11_38171 586c173c07d82b32d32a905617fa26e2 548 SUPERFAMILY SSF52540 296 521 2.71E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_38171 586c173c07d82b32d32a905617fa26e2 548 SUPERFAMILY SSF52540 7 236 6.03E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_38171 586c173c07d82b32d32a905617fa26e2 548 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 1 546 9.9E-290 T 13-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 Y11_38171 586c173c07d82b32d32a905617fa26e2 548 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_38171 586c173c07d82b32d32a905617fa26e2 548 SMART SM00382 341 515 7.7E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_38171 586c173c07d82b32d32a905617fa26e2 548 SMART SM00382 24 229 1.2E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_38171 586c173c07d82b32d32a905617fa26e2 548 Gene3D G3DSA:3.40.50.300 279 548 1.7E-76 T 13-10-2018 Y11_37691 a2d62f9e2e612c95cd7bba6769587f1f 335 Gene3D G3DSA:2.40.30.170 19 243 1.9E-74 T 13-10-2018 Y11_37691 a2d62f9e2e612c95cd7bba6769587f1f 335 Gene3D G3DSA:2.40.50.100 31 163 1.9E-74 T 13-10-2018 Y11_37691 a2d62f9e2e612c95cd7bba6769587f1f 335 SUPERFAMILY SSF111369 23 182 1.18E-23 T 13-10-2018 Y11_37691 a2d62f9e2e612c95cd7bba6769587f1f 335 Gene3D G3DSA:1.10.287.470 65 124 1.9E-74 T 13-10-2018 Y11_37691 a2d62f9e2e612c95cd7bba6769587f1f 335 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 34 222 1.5E-15 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Y11_37691 a2d62f9e2e612c95cd7bba6769587f1f 335 Gene3D G3DSA:2.40.420.20 244 325 1.9E-74 T 13-10-2018 Y11_37691 a2d62f9e2e612c95cd7bba6769587f1f 335 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 7 329 1.0E-96 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 402 415 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 Pfam PF04539 Sigma-70 region 3 457 532 3.5E-29 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 SUPERFAMILY SSF88659 508 610 2.32E-25 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 571 597 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 Pfam PF04546 Sigma-70, non-essential region 139 347 8.1E-75 T 13-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 Gene3D G3DSA:1.10.220.120 1 64 5.3E-31 T 13-10-2018 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 Pfam PF04545 Sigma-70, region 4 546 599 1.0E-18 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 Gene3D G3DSA:1.10.10.10 451 527 5.5E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 374 599 3.5E-38 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 Pfam PF04542 Sigma-70 region 2 378 447 1.7E-21 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 Gene3D G3DSA:1.10.601.10 113 447 7.0E-148 T 13-10-2018 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.7E-12 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 611 46.916 T 13-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 PRINTS PR00046 Major sigma-70 factor signature 586 597 6.3E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 PRINTS PR00046 Major sigma-70 factor signature 402 415 6.3E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 PRINTS PR00046 Major sigma-70 factor signature 550 562 6.3E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 PRINTS PR00046 Major sigma-70 factor signature 571 586 6.3E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 PRINTS PR00046 Major sigma-70 factor signature 426 434 6.3E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 SUPERFAMILY SSF88946 115 445 6.02E-102 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 Gene3D G3DSA:1.10.10.10 528 612 1.8E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 SUPERFAMILY SSF88659 451 524 1.54E-20 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 374 610 7.8E-121 T 13-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 Y11_25101 f4c40e2737b35296fa8779f52faa87c5 612 Pfam PF03979 Sigma-70 factor, region 1.1 4 79 2.0E-30 T 13-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 Y11_10231 7326a052bfee8999ceb9cd575a1cde7d 618 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 618 230.096 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Y11_10231 7326a052bfee8999ceb9cd575a1cde7d 618 Gene3D G3DSA:3.40.50.11540 144 280 2.4E-12 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_10231 7326a052bfee8999ceb9cd575a1cde7d 618 Pfam PF13237 4Fe-4S dicluster domain 373 427 3.9E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_10231 7326a052bfee8999ceb9cd575a1cde7d 618 Gene3D G3DSA:3.30.70.20 372 446 2.1E-11 T 13-10-2018 Y11_10231 7326a052bfee8999ceb9cd575a1cde7d 618 SUPERFAMILY SSF142019 94 303 4.32E-57 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_10231 7326a052bfee8999ceb9cd575a1cde7d 618 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 8.1E-48 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_10231 7326a052bfee8999ceb9cd575a1cde7d 618 Pfam PF10531 SLBB domain 296 344 5.4E-11 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_10231 7326a052bfee8999ceb9cd575a1cde7d 618 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_10231 7326a052bfee8999ceb9cd575a1cde7d 618 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_10231 7326a052bfee8999ceb9cd575a1cde7d 618 SUPERFAMILY SSF46548 336 444 1.88E-21 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Y11_10231 7326a052bfee8999ceb9cd575a1cde7d 618 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 1.5E-28 T 13-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Y11_10231 7326a052bfee8999ceb9cd575a1cde7d 618 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 6.6E-180 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Y11_03481 24d3f92d39ea3a7f1ab69c069777d363 328 SUPERFAMILY SSF52540 1 237 6.19E-79 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_03481 24d3f92d39ea3a7f1ab69c069777d363 328 Pfam PF00005 ABC transporter 21 169 4.4E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_03481 24d3f92d39ea3a7f1ab69c069777d363 328 SMART SM00930 251 328 5.1E-15 T 13-10-2018 IPR018449 NIL domain Y11_03481 24d3f92d39ea3a7f1ab69c069777d363 328 SMART SM00382 30 226 3.0E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_03481 24d3f92d39ea3a7f1ab69c069777d363 328 Gene3D G3DSA:3.40.50.300 1 239 1.0E-71 T 13-10-2018 Y11_03481 24d3f92d39ea3a7f1ab69c069777d363 328 Pfam PF09383 NIL domain 254 326 1.2E-12 T 13-10-2018 IPR018449 NIL domain Y11_03481 24d3f92d39ea3a7f1ab69c069777d363 328 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_03481 24d3f92d39ea3a7f1ab69c069777d363 328 Gene3D G3DSA:3.30.70.260 240 328 3.6E-8 T 13-10-2018 Y11_03481 24d3f92d39ea3a7f1ab69c069777d363 328 SUPERFAMILY SSF55021 251 328 2.75E-11 T 13-10-2018 Y11_14531 31e625367a8f6e98db238bea7c6a41d9 383 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 1.6E-132 T 13-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 Y11_14531 31e625367a8f6e98db238bea7c6a41d9 383 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 4.1E-125 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_14531 31e625367a8f6e98db238bea7c6a41d9 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 5.0E-42 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_14531 31e625367a8f6e98db238bea7c6a41d9 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 5.0E-42 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_14531 31e625367a8f6e98db238bea7c6a41d9 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 5.0E-42 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_14531 31e625367a8f6e98db238bea7c6a41d9 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 5.0E-42 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_14531 31e625367a8f6e98db238bea7c6a41d9 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 5.0E-42 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_14531 31e625367a8f6e98db238bea7c6a41d9 383 Gene3D G3DSA:3.40.1690.10 217 359 2.1E-59 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Y11_14531 31e625367a8f6e98db238bea7c6a41d9 383 SUPERFAMILY SSF160544 244 351 1.31E-40 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Y11_18871 86c45016b4423e0049ed9012cd6508a5 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 4.4E-37 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_18871 86c45016b4423e0049ed9012cd6508a5 546 SUPERFAMILY SSF53738 209 317 1.53E-9 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_18871 86c45016b4423e0049ed9012cd6508a5 546 Gene3D G3DSA:3.40.120.10 319 442 2.7E-35 T 13-10-2018 Y11_18871 86c45016b4423e0049ed9012cd6508a5 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_18871 86c45016b4423e0049ed9012cd6508a5 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 1.4E-19 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_18871 86c45016b4423e0049ed9012cd6508a5 546 Gene3D G3DSA:3.40.120.10 12 218 1.2E-76 T 13-10-2018 Y11_18871 86c45016b4423e0049ed9012cd6508a5 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 543 0.0 T 13-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 Y11_18871 86c45016b4423e0049ed9012cd6508a5 546 SUPERFAMILY SSF53738 26 235 5.18E-52 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_18871 86c45016b4423e0049ed9012cd6508a5 546 Gene3D G3DSA:3.30.310.50 443 545 2.7E-34 T 13-10-2018 Y11_18871 86c45016b4423e0049ed9012cd6508a5 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 9.5E-30 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_18871 86c45016b4423e0049ed9012cd6508a5 546 Gene3D G3DSA:3.40.120.10 221 318 5.3E-46 T 13-10-2018 Y11_18871 86c45016b4423e0049ed9012cd6508a5 546 SUPERFAMILY SSF55957 432 543 2.62E-18 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_18871 86c45016b4423e0049ed9012cd6508a5 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 480 538 2.0E-7 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_18871 86c45016b4423e0049ed9012cd6508a5 546 SUPERFAMILY SSF53738 305 446 6.28E-32 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Y11_08361 0cf3ae623533a42fc2fd1e6123241b50 365 SUPERFAMILY SSF51395 3 363 2.96E-126 T 13-10-2018 Y11_08361 0cf3ae623533a42fc2fd1e6123241b50 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 7.4E-96 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Y11_08361 0cf3ae623533a42fc2fd1e6123241b50 365 Gene3D G3DSA:3.20.20.70 3 365 1.3E-144 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_05081 c7e3c4b59e2ed97ce42bd4b3a1d118a8 361 Pfam PF03916 Polysulphide reductase, NrfD 13 300 2.7E-19 T 13-10-2018 IPR005614 NrfD family Y11_04191 3a9b2dd94c9a835a0c0d0e7ce2406af6 428 SUPERFAMILY SSF55205 4 424 4.45E-145 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Y11_04191 3a9b2dd94c9a835a0c0d0e7ce2406af6 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 427 35.716 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Y11_04191 3a9b2dd94c9a835a0c0d0e7ce2406af6 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 425 1.3E-143 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Y11_04191 3a9b2dd94c9a835a0c0d0e7ce2406af6 428 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Y11_04191 3a9b2dd94c9a835a0c0d0e7ce2406af6 428 PIRSF PIRSF000505 2 428 6.7E-155 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Y11_04191 3a9b2dd94c9a835a0c0d0e7ce2406af6 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Y11_04191 3a9b2dd94c9a835a0c0d0e7ce2406af6 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 421 1.2E-152 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Y11_04191 3a9b2dd94c9a835a0c0d0e7ce2406af6 428 Gene3D G3DSA:3.65.10.10 242 421 1.1E-159 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Y11_04191 3a9b2dd94c9a835a0c0d0e7ce2406af6 428 Gene3D G3DSA:3.65.10.10 21 224 1.1E-159 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Y11_12561 c501ad6d8ae7d11b6727fdcd5ad3dabf 420 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 417 7.1E-159 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Y11_12561 c501ad6d8ae7d11b6727fdcd5ad3dabf 420 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 13-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Y11_12561 c501ad6d8ae7d11b6727fdcd5ad3dabf 420 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.707 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Y11_12561 c501ad6d8ae7d11b6727fdcd5ad3dabf 420 SUPERFAMILY SSF69742 1 158 2.62E-47 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Y11_12561 c501ad6d8ae7d11b6727fdcd5ad3dabf 420 Gene3D G3DSA:3.40.50.720 161 313 1.1E-44 T 13-10-2018 Y11_12561 c501ad6d8ae7d11b6727fdcd5ad3dabf 420 PIRSF PIRSF000445 1 420 3.5E-156 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Y11_12561 c501ad6d8ae7d11b6727fdcd5ad3dabf 420 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 3.1E-49 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Y11_12561 c501ad6d8ae7d11b6727fdcd5ad3dabf 420 SUPERFAMILY SSF69075 317 418 3.66E-28 T 13-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Y11_12561 c501ad6d8ae7d11b6727fdcd5ad3dabf 420 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.1E-49 T 13-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Y11_12561 c501ad6d8ae7d11b6727fdcd5ad3dabf 420 Gene3D G3DSA:3.30.460.30 1 158 7.4E-59 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Y11_12561 c501ad6d8ae7d11b6727fdcd5ad3dabf 420 SUPERFAMILY SSF51735 162 315 7.1E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_12561 c501ad6d8ae7d11b6727fdcd5ad3dabf 420 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 3.4E-24 T 13-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Y11_33781 b456cba06671a54b295f0cc52a911b56 252 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 67 243 5.4E-73 T 13-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Y11_33781 b456cba06671a54b295f0cc52a911b56 252 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 7 252 58.718 T 13-10-2018 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 Y11_33781 b456cba06671a54b295f0cc52a911b56 252 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 71 237 2.8E-53 T 13-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Y11_15571 aa35a7d9159d4372cf3307d24ea1b457 425 Pfam PF01554 MatE 2 150 1.2E-33 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Y11_15571 aa35a7d9159d4372cf3307d24ea1b457 425 Pfam PF01554 MatE 220 381 1.7E-19 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Y11_15571 aa35a7d9159d4372cf3307d24ea1b457 425 TIGRFAM TIGR00797 matE: MATE efflux family protein 1 394 7.5E-63 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Y11_15571 aa35a7d9159d4372cf3307d24ea1b457 425 PIRSF PIRSF006603 1 421 8.9E-61 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Y11_32781 449f7b5022e8510ec229d2255fce31e7 136 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 4 136 40.312 T 13-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 Y11_32781 449f7b5022e8510ec229d2255fce31e7 136 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 136 7.2E-54 T 13-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 Y11_32781 449f7b5022e8510ec229d2255fce31e7 136 Gene3D G3DSA:3.40.1260.10 1 136 5.7E-55 T 13-10-2018 IPR027396 DsrEFH-like Y11_32781 449f7b5022e8510ec229d2255fce31e7 136 Pfam PF02635 DsrE/DsrF-like family 5 136 8.3E-27 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Y11_32781 449f7b5022e8510ec229d2255fce31e7 136 SUPERFAMILY SSF75169 1 136 2.75E-34 T 13-10-2018 IPR027396 DsrEFH-like Y11_42701 66782d9d56271dad4baed78b29c0e8df 164 Pfam PF02082 Transcriptional regulator 1 83 2.4E-27 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type Y11_42701 66782d9d56271dad4baed78b29c0e8df 164 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 2.7E-47 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type Y11_42701 66782d9d56271dad4baed78b29c0e8df 164 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 3.8E-67 T 13-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 Y11_42701 66782d9d56271dad4baed78b29c0e8df 164 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 164 52.162 T 13-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 Y11_42701 66782d9d56271dad4baed78b29c0e8df 164 Gene3D G3DSA:1.10.10.10 1 144 3.2E-56 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_42701 66782d9d56271dad4baed78b29c0e8df 164 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 13-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Y11_42701 66782d9d56271dad4baed78b29c0e8df 164 SUPERFAMILY SSF46785 2 133 9.79E-37 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_40751 1de4b107a0ab1cdc20cbe99c2a311950 963 SUPERFAMILY SSF63411 36 263 8.62E-52 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Y11_40751 1de4b107a0ab1cdc20cbe99c2a311950 963 SUPERFAMILY SSF63411 747 956 7.33E-43 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Y11_40751 1de4b107a0ab1cdc20cbe99c2a311950 963 SUPERFAMILY SSF63411 506 731 8.33E-49 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Y11_40751 1de4b107a0ab1cdc20cbe99c2a311950 963 Pfam PF05193 Peptidase M16 inactive domain 683 860 1.5E-9 T 13-10-2018 IPR007863 Peptidase M16, C-terminal Y11_40751 1de4b107a0ab1cdc20cbe99c2a311950 963 Pfam PF05193 Peptidase M16 inactive domain 218 394 1.5E-19 T 13-10-2018 IPR007863 Peptidase M16, C-terminal Y11_40751 1de4b107a0ab1cdc20cbe99c2a311950 963 SUPERFAMILY SSF63411 267 503 9.72E-69 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Y11_40751 1de4b107a0ab1cdc20cbe99c2a311950 963 Pfam PF16187 Middle or third domain of peptidase_M16 402 672 5.8E-60 T 13-10-2018 IPR032632 Peptidase M16, middle/third domain Y11_40751 1de4b107a0ab1cdc20cbe99c2a311950 963 Gene3D G3DSA:3.30.830.10 27 273 2.1E-78 T 13-10-2018 Y11_40751 1de4b107a0ab1cdc20cbe99c2a311950 963 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 77 100 - T 13-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 Y11_40751 1de4b107a0ab1cdc20cbe99c2a311950 963 Gene3D G3DSA:3.30.830.10 654 919 1.8E-131 T 13-10-2018 Y11_40751 1de4b107a0ab1cdc20cbe99c2a311950 963 Gene3D G3DSA:3.30.830.10 275 504 1.8E-71 T 13-10-2018 Y11_40751 1de4b107a0ab1cdc20cbe99c2a311950 963 Gene3D G3DSA:3.30.830.10 506 887 1.8E-131 T 13-10-2018 Y11_40751 1de4b107a0ab1cdc20cbe99c2a311950 963 Pfam PF00675 Insulinase (Peptidase family M16) 57 193 2.5E-34 T 13-10-2018 IPR011765 Peptidase M16, N-terminal Y11_10631 e3b17b4154b43df532c6e553368cf5d3 324 SUPERFAMILY SSF53850 91 322 3.36E-43 T 13-10-2018 Y11_10631 e3b17b4154b43df532c6e553368cf5d3 324 Gene3D G3DSA:3.40.190.10 92 303 1.0E-99 T 13-10-2018 Y11_10631 e3b17b4154b43df532c6e553368cf5d3 324 Gene3D G3DSA:3.40.190.10 167 267 1.0E-99 T 13-10-2018 Y11_10631 e3b17b4154b43df532c6e553368cf5d3 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_10631 e3b17b4154b43df532c6e553368cf5d3 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_10631 e3b17b4154b43df532c6e553368cf5d3 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_10631 e3b17b4154b43df532c6e553368cf5d3 324 Gene3D G3DSA:1.10.10.10 1 86 1.1E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_10631 e3b17b4154b43df532c6e553368cf5d3 324 SUPERFAMILY SSF46785 1 85 7.39E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_10631 e3b17b4154b43df532c6e553368cf5d3 324 Pfam PF03466 LysR substrate binding domain 92 288 1.0E-40 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_10631 e3b17b4154b43df532c6e553368cf5d3 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.4E-14 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_05421 722dd9d254815d1af1674adce2a3bc42 596 Gene3D G3DSA:1.10.10.10 2 110 3.6E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_05421 722dd9d254815d1af1674adce2a3bc42 596 SUPERFAMILY SSF46785 6 87 1.34E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_05421 722dd9d254815d1af1674adce2a3bc42 596 SUPERFAMILY SSF53850 121 593 1.48E-63 T 13-10-2018 Y11_05421 722dd9d254815d1af1674adce2a3bc42 596 Gene3D G3DSA:3.40.190.10 116 344 2.0E-36 T 13-10-2018 Y11_05421 722dd9d254815d1af1674adce2a3bc42 596 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 117 6.4E-36 T 13-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain Y11_05421 722dd9d254815d1af1674adce2a3bc42 596 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 307 4.1E-22 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain Y11_31801 7903b8d1478cadf4976f3fe17e083e73 559 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 538 2.2E-38 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Y11_31801 7903b8d1478cadf4976f3fe17e083e73 559 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 331 4.9E-29 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Y11_31801 7903b8d1478cadf4976f3fe17e083e73 559 Gene3D G3DSA:3.40.50.1220 190 357 2.7E-38 T 13-10-2018 Y11_31801 7903b8d1478cadf4976f3fe17e083e73 559 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 430 449 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Y11_31801 7903b8d1478cadf4976f3fe17e083e73 559 Gene3D G3DSA:3.40.50.970 366 559 1.5E-56 T 13-10-2018 Y11_31801 7903b8d1478cadf4976f3fe17e083e73 559 SUPERFAMILY SSF52518 371 551 7.47E-51 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_31801 7903b8d1478cadf4976f3fe17e083e73 559 Gene3D G3DSA:3.40.50.970 4 188 1.4E-62 T 13-10-2018 Y11_31801 7903b8d1478cadf4976f3fe17e083e73 559 SUPERFAMILY SSF52518 13 182 7.85E-46 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_31801 7903b8d1478cadf4976f3fe17e083e73 559 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 13 551 7.0E-260 T 13-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Y11_31801 7903b8d1478cadf4976f3fe17e083e73 559 SUPERFAMILY SSF52467 195 352 6.33E-37 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Y11_31801 7903b8d1478cadf4976f3fe17e083e73 559 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 177 7.9E-48 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Y11_01511 363fff5e9154c287008b97f040fa8e79 180 Pfam PF04315 Elongation factor P hydroxylase 11 167 1.5E-78 T 13-10-2018 IPR007411 Elongation factor P hydroxylase Y11_41351 4bf6ecaf00680c28f1d2fd0e3bf77def 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 181 2.5E-92 T 13-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 Y11_41351 4bf6ecaf00680c28f1d2fd0e3bf77def 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 154 2.0E-40 T 13-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 Y11_41351 4bf6ecaf00680c28f1d2fd0e3bf77def 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 153 6.4E-38 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Y11_41351 4bf6ecaf00680c28f1d2fd0e3bf77def 188 SUPERFAMILY SSF56784 3 183 9.65E-53 T 13-10-2018 IPR036412 HAD-like superfamily Y11_41351 4bf6ecaf00680c28f1d2fd0e3bf77def 188 Gene3D G3DSA:3.40.50.1000 4 188 1.9E-65 T 13-10-2018 IPR023214 HAD superfamily Y11_41351 4bf6ecaf00680c28f1d2fd0e3bf77def 188 PIRSF PIRSF004682 1 188 3.1E-66 T 13-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 Y11_41351 4bf6ecaf00680c28f1d2fd0e3bf77def 188 Pfam PF13242 HAD-hyrolase-like 109 179 1.3E-11 T 13-10-2018 Y11_13761 b504f25f30dc864578ea8a0865613d76 196 Pfam PF00860 Permease family 3 152 1.2E-47 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Y11_07401 ca74d1d0d02f6e6d77743666eda65072 293 Pfam PF01435 Peptidase family M48 74 288 1.8E-39 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Y11_07401 ca74d1d0d02f6e6d77743666eda65072 293 Hamap MF_00188 Protease HtpX [htpX]. 1 289 26.264 T 13-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 Y11_07401 ca74d1d0d02f6e6d77743666eda65072 293 Gene3D G3DSA:3.30.2010.10 64 157 2.7E-37 T 13-10-2018 Y11_37861 9fde651b9f4029409069fc9f1537d85b 483 Pfam PF02264 LamB porin 71 483 2.1E-107 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Y11_37861 9fde651b9f4029409069fc9f1537d85b 483 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 75 479 0.0 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Y11_37861 9fde651b9f4029409069fc9f1537d85b 483 Gene3D G3DSA:2.40.170.10 67 483 5.6E-166 T 13-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 Y11_37861 9fde651b9f4029409069fc9f1537d85b 483 Pfam PF11471 Maltoporin periplasmic N-terminal extension 3 29 6.0E-9 T 13-10-2018 IPR021570 LamB-type porin N-terminal domain Y11_37861 9fde651b9f4029409069fc9f1537d85b 483 SUPERFAMILY SSF56935 68 483 2.93E-131 T 13-10-2018 Y11_41841 0d775cf763120f70485d05d5f42def81 572 SUPERFAMILY SSF51556 135 571 5.96E-179 T 13-10-2018 IPR032466 Metal-dependent hydrolase Y11_41841 0d775cf763120f70485d05d5f42def81 572 ProSitePatterns PS00145 Urease active site. 322 338 - T 13-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41841 0d775cf763120f70485d05d5f42def81 572 SUPERFAMILY SSF51338 2 183 1.55E-56 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_41841 0d775cf763120f70485d05d5f42def81 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 432 445 3.8E-27 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41841 0d775cf763120f70485d05d5f42def81 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 300 317 3.8E-27 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41841 0d775cf763120f70485d05d5f42def81 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 406 421 3.8E-27 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41841 0d775cf763120f70485d05d5f42def81 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 339 355 3.8E-27 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41841 0d775cf763120f70485d05d5f42def81 572 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 3 571 4.0E-284 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41841 0d775cf763120f70485d05d5f42def81 572 ProSitePatterns PS01120 Urease nickel ligands signature. 132 145 - T 13-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41841 0d775cf763120f70485d05d5f42def81 572 Pfam PF01979 Amidohydrolase family 130 459 3.2E-71 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Y11_41841 0d775cf763120f70485d05d5f42def81 572 SUPERFAMILY SSF51338 414 484 4.83E-10 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_41841 0d775cf763120f70485d05d5f42def81 572 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 124 7.1E-51 T 13-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_41841 0d775cf763120f70485d05d5f42def81 572 Gene3D G3DSA:3.20.20.140 134 569 1.0E-278 T 13-10-2018 Y11_41841 0d775cf763120f70485d05d5f42def81 572 Gene3D G3DSA:2.30.40.10 4 485 1.0E-278 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_41841 0d775cf763120f70485d05d5f42def81 572 Hamap MF_01953 Urease subunit alpha [ureC]. 2 572 53.688 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Y11_06841 3132e954b4e2ece02d2b42d8ae719dd6 645 Pfam PF03239 Iron permease FTR1 family 156 561 1.0E-80 T 13-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 Y11_12061 43d91d407491125288384af001cdf4b2 226 Pfam PF13751 Transposase DDE domain 76 194 2.5E-27 T 13-10-2018 IPR025668 Transposase DDE domain Y11_10201 bb08fb74cfbd749127bf3f21649aca20 147 Pfam PF10754 Protein of unknown function (DUF2569) 7 145 1.3E-45 T 13-10-2018 IPR019690 Protein of unknown function DUF2569 Y11_38511 d32f64d66d8501c94340ac82b332c8a7 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 8.8E-42 T 13-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Y11_38511 d32f64d66d8501c94340ac82b332c8a7 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 1.0E-41 T 13-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Y11_38511 d32f64d66d8501c94340ac82b332c8a7 273 SUPERFAMILY SSF51735 4 272 7.38E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_38511 d32f64d66d8501c94340ac82b332c8a7 273 SUPERFAMILY SSF55347 131 240 9.37E-37 T 13-10-2018 Y11_38511 d32f64d66d8501c94340ac82b332c8a7 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 34.645 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Y11_38511 d32f64d66d8501c94340ac82b332c8a7 273 PIRSF PIRSF000161 4 272 1.8E-88 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Y11_38511 d32f64d66d8501c94340ac82b332c8a7 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 13-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Y11_38511 d32f64d66d8501c94340ac82b332c8a7 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 268 3.3E-105 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Y11_38511 d32f64d66d8501c94340ac82b332c8a7 273 Gene3D G3DSA:3.40.50.720 7 268 4.0E-103 T 13-10-2018 Y11_38511 d32f64d66d8501c94340ac82b332c8a7 273 Gene3D G3DSA:3.30.360.10 131 238 4.0E-103 T 13-10-2018 Y11_35491 4aa766b90a2b4d313799190748a2900a 358 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 6 344 1.1E-119 T 13-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 Y11_35491 4aa766b90a2b4d313799190748a2900a 358 Gene3D G3DSA:3.40.1690.10 214 355 2.7E-50 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Y11_35491 4aa766b90a2b4d313799190748a2900a 358 SUPERFAMILY SSF160544 241 347 1.44E-31 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Y11_35491 4aa766b90a2b4d313799190748a2900a 358 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 342 2.3E-105 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_35491 4aa766b90a2b4d313799190748a2900a 358 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 269 284 2.1E-38 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_35491 4aa766b90a2b4d313799190748a2900a 358 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 225 242 2.1E-38 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_35491 4aa766b90a2b4d313799190748a2900a 358 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 2.1E-38 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_35491 4aa766b90a2b4d313799190748a2900a 358 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 299 320 2.1E-38 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_35491 4aa766b90a2b4d313799190748a2900a 358 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 205 223 2.1E-38 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Y11_35751 02dcf4bcd6eb108582e4afa29c94f2db 437 SUPERFAMILY SSF102114 45 423 1.83E-89 T 13-10-2018 Y11_35751 02dcf4bcd6eb108582e4afa29c94f2db 437 Pfam PF04055 Radical SAM superfamily 59 228 2.3E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_35751 02dcf4bcd6eb108582e4afa29c94f2db 437 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 16 427 1.9E-173 T 13-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW Y11_35751 02dcf4bcd6eb108582e4afa29c94f2db 437 SMART SM00729 53 275 8.2E-54 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Y11_35751 02dcf4bcd6eb108582e4afa29c94f2db 437 Gene3D G3DSA:3.80.30.20 22 354 1.8E-84 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Y11_43441 e19854f56fdd9529d976888592f06072 181 SUPERFAMILY SSF55729 3 164 1.49E-40 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_43441 e19854f56fdd9529d976888592f06072 181 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 4.5E-22 T 13-10-2018 IPR000182 GNAT domain Y11_43441 e19854f56fdd9529d976888592f06072 181 Gene3D G3DSA:3.40.630.30 5 174 1.4E-50 T 13-10-2018 Y11_37051 e014a9dee5b273677a4408df6e1ed33b 382 Gene3D G3DSA:3.20.20.140 321 340 6.5E-8 T 13-10-2018 Y11_37051 e014a9dee5b273677a4408df6e1ed33b 382 Gene3D G3DSA:2.30.40.10 2 49 1.1E-6 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_37051 e014a9dee5b273677a4408df6e1ed33b 382 SUPERFAMILY SSF51338 2 381 4.28E-7 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_37051 e014a9dee5b273677a4408df6e1ed33b 382 Gene3D G3DSA:3.20.20.140 50 102 1.1E-6 T 13-10-2018 Y11_37051 e014a9dee5b273677a4408df6e1ed33b 382 PIRSF PIRSF038971 1 382 5.3E-153 T 13-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Y11_37051 e014a9dee5b273677a4408df6e1ed33b 382 Pfam PF07969 Amidohydrolase family 228 381 2.9E-11 T 13-10-2018 IPR013108 Amidohydrolase 3 Y11_37051 e014a9dee5b273677a4408df6e1ed33b 382 SUPERFAMILY SSF51556 50 345 3.86E-20 T 13-10-2018 IPR032466 Metal-dependent hydrolase Y11_37051 e014a9dee5b273677a4408df6e1ed33b 382 Gene3D G3DSA:2.30.40.10 341 372 6.5E-8 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_37051 e014a9dee5b273677a4408df6e1ed33b 382 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 3 381 1.2E-150 T 13-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Y11_04461 cda115b11cf3a82b888f7c4001a1d1c5 406 PIRSF PIRSF000484 4 385 5.3E-60 T 13-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Y11_04461 cda115b11cf3a82b888f7c4001a1d1c5 406 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 13 400 6.9E-167 T 13-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Y11_04461 cda115b11cf3a82b888f7c4001a1d1c5 406 SUPERFAMILY SSF54675 7 143 6.18E-44 T 13-10-2018 Y11_04461 cda115b11cf3a82b888f7c4001a1d1c5 406 SUPERFAMILY SSF51690 125 397 8.24E-86 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Y11_04461 cda115b11cf3a82b888f7c4001a1d1c5 406 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 10 401 48.568 T 13-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Y11_04461 cda115b11cf3a82b888f7c4001a1d1c5 406 Gene3D G3DSA:3.20.140.10 6 406 1.1E-169 T 13-10-2018 Y11_04461 cda115b11cf3a82b888f7c4001a1d1c5 406 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 174 399 1.4E-80 T 13-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Y11_40991 83265c6a862322f1c94c81dab19507b8 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 8.5E-161 T 13-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 Y11_40991 83265c6a862322f1c94c81dab19507b8 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 7.4E-12 T 13-10-2018 IPR001451 Hexapeptide repeat Y11_40991 83265c6a862322f1c94c81dab19507b8 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 2.7E-25 T 13-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 Y11_40991 83265c6a862322f1c94c81dab19507b8 274 SUPERFAMILY SSF51161 1 256 4.16E-80 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Y11_40991 83265c6a862322f1c94c81dab19507b8 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.685 T 13-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 Y11_40991 83265c6a862322f1c94c81dab19507b8 274 Gene3D G3DSA:1.10.166.10 1 70 1.0E-34 T 13-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 Y11_40991 83265c6a862322f1c94c81dab19507b8 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 5.5E-4 T 13-10-2018 IPR001451 Hexapeptide repeat Y11_40991 83265c6a862322f1c94c81dab19507b8 274 Gene3D G3DSA:2.160.10.10 87 257 1.6E-57 T 13-10-2018 Y11_40991 83265c6a862322f1c94c81dab19507b8 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Y11_27011 16810f929c9904dd72a2337734cb414d 133 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 60 127 7.7E-18 T 13-10-2018 IPR039561 Peptidase M15C GO:0008233 Y11_27011 16810f929c9904dd72a2337734cb414d 133 SUPERFAMILY SSF55166 8 129 6.02E-30 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Y11_27011 16810f929c9904dd72a2337734cb414d 133 Gene3D G3DSA:3.30.1380.10 11 127 5.1E-23 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Y11_43351 0c37bdd25158b0a93cb649f3729c1f75 220 SMART SM00052 3 210 5.5E-4 T 13-10-2018 IPR001633 EAL domain Y11_43351 0c37bdd25158b0a93cb649f3729c1f75 220 Gene3D G3DSA:3.20.20.450 26 213 1.2E-24 T 13-10-2018 IPR035919 EAL domain superfamily Y11_43351 0c37bdd25158b0a93cb649f3729c1f75 220 Pfam PF00563 EAL domain 55 204 8.4E-20 T 13-10-2018 IPR001633 EAL domain Y11_43351 0c37bdd25158b0a93cb649f3729c1f75 220 SUPERFAMILY SSF141868 58 212 1.57E-21 T 13-10-2018 IPR035919 EAL domain superfamily Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 SUPERFAMILY SSF49373 450 541 9.22E-39 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 Gene3D G3DSA:3.10.100.10 736 834 2.2E-47 T 13-10-2018 IPR016186 C-type lectin-like/link domain superfamily Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 Pfam PF09134 Invasin, domain 3 545 641 9.3E-20 T 13-10-2018 IPR015217 Invasin, domain 3 Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 Gene3D G3DSA:2.60.40.10 543 642 2.9E-23 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 SMART SM00634 450 539 2.3E-16 T 13-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 SUPERFAMILY SSF49373 548 640 1.62E-16 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 SUPERFAMILY SSF49373 645 734 3.88E-28 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 Gene3D G3DSA:2.60.40.10 442 541 3.6E-18 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 Gene3D G3DSA:2.40.160.160 89 333 7.2E-105 T 13-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 PRINTS PR01369 Intimin signature 178 193 5.2E-12 T 13-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 PRINTS PR01369 Intimin signature 206 225 5.2E-12 T 13-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 PRINTS PR01369 Intimin signature 274 293 5.2E-12 T 13-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 PRINTS PR01369 Intimin signature 362 374 5.2E-12 T 13-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 SUPERFAMILY SSF56436 736 835 2.26E-51 T 13-10-2018 IPR016187 C-type lectin fold Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 Gene3D G3DSA:2.60.40.1080 644 735 1.8E-24 T 13-10-2018 Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 Pfam PF07979 Intimin C-type lectin domain 735 833 1.8E-20 T 13-10-2018 IPR013117 Intimin, C-terminal Y11_14481 5cd8e01e4b3ef7ace0969c2393fa936f 835 Pfam PF11924 Inverse autotransporter, beta-domain 64 325 3.0E-101 T 13-10-2018 IPR024519 Inverse autotransporter, beta-domain Y11_05611 dbe084c928287e94e66db9a409a4fadc 223 SMART SM00862 145 220 7.6E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_05611 dbe084c928287e94e66db9a409a4fadc 223 Gene3D G3DSA:1.10.10.10 123 223 1.4E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_05611 dbe084c928287e94e66db9a409a4fadc 223 SMART SM00448 1 112 3.6E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_05611 dbe084c928287e94e66db9a409a4fadc 223 Gene3D G3DSA:3.40.50.2300 1 120 2.4E-40 T 13-10-2018 Y11_05611 dbe084c928287e94e66db9a409a4fadc 223 SUPERFAMILY SSF52172 1 175 3.42E-39 T 13-10-2018 IPR011006 CheY-like superfamily Y11_05611 dbe084c928287e94e66db9a409a4fadc 223 Pfam PF00072 Response regulator receiver domain 3 113 2.3E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_05611 dbe084c928287e94e66db9a409a4fadc 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 5.7E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_42391 2ee0256a412acf31eac9a9da4e1d61c7 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 8.9E-104 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Y11_42391 2ee0256a412acf31eac9a9da4e1d61c7 243 SUPERFAMILY SSF63892 4 242 1.7E-100 T 13-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Y11_42391 2ee0256a412acf31eac9a9da4e1d61c7 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 4.1E-103 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Y11_42391 2ee0256a412acf31eac9a9da4e1d61c7 243 Gene3D G3DSA:3.20.20.70 1 243 1.3E-108 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_42391 2ee0256a412acf31eac9a9da4e1d61c7 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 132.993 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Y11_05401 13bfe1ba874b2cf1421f467a9c866513 394 Gene3D G3DSA:3.20.20.70 13 384 1.2E-75 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_05401 13bfe1ba874b2cf1421f467a9c866513 394 TIGRFAM TIGR04496 rSAM_XyeB: radical SAM/SPASM domain peptide maturase, XyeB family 10 393 5.0E-240 T 13-10-2018 IPR030989 Radical SAM/SPASM domain peptide maturase, XyeB family Y11_05401 13bfe1ba874b2cf1421f467a9c866513 394 SUPERFAMILY SSF102114 15 345 5.23E-30 T 13-10-2018 Y11_05401 13bfe1ba874b2cf1421f467a9c866513 394 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 13-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Y11_05401 13bfe1ba874b2cf1421f467a9c866513 394 Pfam PF04055 Radical SAM superfamily 19 168 2.2E-11 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_05401 13bfe1ba874b2cf1421f467a9c866513 394 Pfam PF13394 4Fe-4S single cluster domain 22 117 1.9E-5 T 13-10-2018 Y11_24401 279f765cafd51408907fd69493033f5f 109 Pfam PF00665 Integrase core domain 55 107 1.1E-9 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_24401 279f765cafd51408907fd69493033f5f 109 Gene3D G3DSA:3.30.420.10 45 109 3.1E-5 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_24401 279f765cafd51408907fd69493033f5f 109 SUPERFAMILY SSF53098 47 107 7.4E-12 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_01661 8c43f13bb9f4b26fffe9172582592976 345 PIRSF PIRSF020588 1 344 3.4E-149 T 13-10-2018 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 Y11_23461 4a4e239ffbe06589eefe7c45040bbbda 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.701 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Y11_23461 4a4e239ffbe06589eefe7c45040bbbda 90 Gene3D G3DSA:1.10.3880.10 1 90 2.6E-37 T 13-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 Y11_23461 4a4e239ffbe06589eefe7c45040bbbda 90 SUPERFAMILY SSF111148 1 89 1.18E-39 T 13-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 Y11_23461 4a4e239ffbe06589eefe7c45040bbbda 90 PIRSF PIRSF029827 1 90 1.8E-43 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Y11_23461 4a4e239ffbe06589eefe7c45040bbbda 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 9.3E-40 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Y11_23461 4a4e239ffbe06589eefe7c45040bbbda 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 3.0E-38 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Y11_15131 a3b2418800fa76572d15a86ceaf8ba39 198 Gene3D G3DSA:3.40.50.12740 3 198 1.1E-45 T 13-10-2018 Y11_15131 a3b2418800fa76572d15a86ceaf8ba39 198 SMART SM00421 135 192 7.7E-25 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_15131 a3b2418800fa76572d15a86ceaf8ba39 198 SMART SM00448 1 104 1.4E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_15131 a3b2418800fa76572d15a86ceaf8ba39 198 Pfam PF00072 Response regulator receiver domain 10 101 4.4E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_15131 a3b2418800fa76572d15a86ceaf8ba39 198 SUPERFAMILY SSF52172 15 116 3.56E-22 T 13-10-2018 IPR011006 CheY-like superfamily Y11_15131 a3b2418800fa76572d15a86ceaf8ba39 198 SUPERFAMILY SSF46894 129 198 1.19E-20 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_15131 a3b2418800fa76572d15a86ceaf8ba39 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 4.6E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_15131 a3b2418800fa76572d15a86ceaf8ba39 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 4.6E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_15131 a3b2418800fa76572d15a86ceaf8ba39 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 4.6E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_15131 a3b2418800fa76572d15a86ceaf8ba39 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 192 9.9E-22 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_15131 a3b2418800fa76572d15a86ceaf8ba39 198 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_11971 1a6ecf85261daa3cea61124c26f89c94 444 Pfam PF08013 Tagatose 6 phosphate kinase 4 423 1.2E-199 T 13-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 Y11_11971 1a6ecf85261daa3cea61124c26f89c94 444 SUPERFAMILY SSF51569 5 423 1.52E-165 T 13-10-2018 Y11_11971 1a6ecf85261daa3cea61124c26f89c94 444 Gene3D G3DSA:3.20.20.70 9 416 1.5E-174 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_11971 1a6ecf85261daa3cea61124c26f89c94 444 PIRSF PIRSF009264 1 427 2.2E-197 T 13-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 Y11_11971 1a6ecf85261daa3cea61124c26f89c94 444 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 423 8.6E-205 T 13-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 Y11_11971 1a6ecf85261daa3cea61124c26f89c94 444 Gene3D G3DSA:1.10.400.20 287 410 1.5E-174 T 13-10-2018 Y11_41941 57566b53a63598a41c0817d86948ca90 391 Gene3D G3DSA:3.40.50.720 238 385 1.3E-26 T 13-10-2018 Y11_41941 57566b53a63598a41c0817d86948ca90 391 PRINTS PR00169 Potassium channel signature 49 69 2.7E-5 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Y11_41941 57566b53a63598a41c0817d86948ca90 391 PRINTS PR00169 Potassium channel signature 195 221 2.7E-5 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Y11_41941 57566b53a63598a41c0817d86948ca90 391 PRINTS PR00169 Potassium channel signature 166 188 2.7E-5 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Y11_41941 57566b53a63598a41c0817d86948ca90 391 Gene3D G3DSA:1.10.287.70 140 221 4.7E-14 T 13-10-2018 Y11_41941 57566b53a63598a41c0817d86948ca90 391 SUPERFAMILY SSF51735 239 376 4.04E-20 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_41941 57566b53a63598a41c0817d86948ca90 391 Pfam PF02254 TrkA-N domain 243 356 1.4E-14 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Y11_41941 57566b53a63598a41c0817d86948ca90 391 SUPERFAMILY SSF81324 118 263 9.42E-18 T 13-10-2018 Y11_41941 57566b53a63598a41c0817d86948ca90 391 Pfam PF07885 Ion channel 148 218 8.0E-12 T 13-10-2018 IPR013099 Potassium channel domain Y11_22571 c79328e313b4821daef828153cccec1c 716 Pfam PF03412 Peptidase C39 family 8 133 3.9E-23 T 13-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 Y11_22571 c79328e313b4821daef828153cccec1c 716 Pfam PF00005 ABC transporter 500 649 4.5E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_22571 c79328e313b4821daef828153cccec1c 716 Pfam PF00664 ABC transporter transmembrane region 171 430 6.6E-11 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Y11_22571 c79328e313b4821daef828153cccec1c 716 Gene3D G3DSA:3.90.70.10 16 140 1.7E-23 T 13-10-2018 Y11_22571 c79328e313b4821daef828153cccec1c 716 Gene3D G3DSA:3.40.50.300 476 710 1.0E-62 T 13-10-2018 Y11_22571 c79328e313b4821daef828153cccec1c 716 SMART SM00382 509 697 8.6E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_22571 c79328e313b4821daef828153cccec1c 716 SUPERFAMILY SSF52540 473 703 8.75E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_22571 c79328e313b4821daef828153cccec1c 716 SUPERFAMILY SSF90123 167 447 1.7E-32 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_22571 c79328e313b4821daef828153cccec1c 716 ProSitePatterns PS00211 ABC transporters family signature. 621 635 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_22571 c79328e313b4821daef828153cccec1c 716 Gene3D G3DSA:1.20.1560.10 162 448 2.5E-25 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_03761 54096255bfb9307e8750a68d0b465382 243 SMART SM00062 22 241 2.5E-86 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_03761 54096255bfb9307e8750a68d0b465382 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 5 241 2.1E-90 T 13-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 Y11_03761 54096255bfb9307e8750a68d0b465382 243 SUPERFAMILY SSF53850 1 242 5.23E-74 T 13-10-2018 Y11_03761 54096255bfb9307e8750a68d0b465382 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site Y11_03761 54096255bfb9307e8750a68d0b465382 243 SMART SM00079 22 243 1.4E-5 T 13-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Y11_03761 54096255bfb9307e8750a68d0b465382 243 Gene3D G3DSA:3.40.190.10 108 201 8.5E-85 T 13-10-2018 Y11_03761 54096255bfb9307e8750a68d0b465382 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 3.1E-71 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_03761 54096255bfb9307e8750a68d0b465382 243 Gene3D G3DSA:3.40.190.10 26 240 8.5E-85 T 13-10-2018 Y11_04421 02a01b5fcee473b5e67647f1d69297ae 509 Pfam PF12792 CSS motif domain associated with EAL 42 231 2.5E-36 T 13-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain Y11_04421 02a01b5fcee473b5e67647f1d69297ae 509 SMART SM00052 256 502 1.9E-100 T 13-10-2018 IPR001633 EAL domain Y11_04421 02a01b5fcee473b5e67647f1d69297ae 509 SUPERFAMILY SSF141868 263 508 6.54E-76 T 13-10-2018 IPR035919 EAL domain superfamily Y11_04421 02a01b5fcee473b5e67647f1d69297ae 509 Pfam PF00563 EAL domain 263 497 6.5E-63 T 13-10-2018 IPR001633 EAL domain Y11_04421 02a01b5fcee473b5e67647f1d69297ae 509 Gene3D G3DSA:3.20.20.450 256 508 7.6E-82 T 13-10-2018 IPR035919 EAL domain superfamily Y11_02741 529983a3f5312882c05f08bfc0684bea 367 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 6.1E-71 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_02741 529983a3f5312882c05f08bfc0684bea 367 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 6.1E-71 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_02741 529983a3f5312882c05f08bfc0684bea 367 PRINTS PR00183 E.coli/Salmonella-type porin signature 239 256 6.1E-71 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_02741 529983a3f5312882c05f08bfc0684bea 367 PRINTS PR00183 E.coli/Salmonella-type porin signature 274 293 6.1E-71 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_02741 529983a3f5312882c05f08bfc0684bea 367 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 6.1E-71 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_02741 529983a3f5312882c05f08bfc0684bea 367 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 6.1E-71 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_02741 529983a3f5312882c05f08bfc0684bea 367 SUPERFAMILY SSF56935 22 367 5.23E-83 T 13-10-2018 Y11_02741 529983a3f5312882c05f08bfc0684bea 367 Gene3D G3DSA:2.40.160.10 22 367 1.9E-157 T 13-10-2018 IPR023614 Porin domain superfamily Y11_02741 529983a3f5312882c05f08bfc0684bea 367 Pfam PF00267 Gram-negative porin 27 367 1.1E-146 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_02741 529983a3f5312882c05f08bfc0684bea 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 233 245 2.9E-16 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_02741 529983a3f5312882c05f08bfc0684bea 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 2.9E-16 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_02741 529983a3f5312882c05f08bfc0684bea 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 319 336 2.9E-16 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_02741 529983a3f5312882c05f08bfc0684bea 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 2.9E-16 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_02741 529983a3f5312882c05f08bfc0684bea 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 151 162 2.9E-16 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_02741 529983a3f5312882c05f08bfc0684bea 367 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 319 335 - T 13-10-2018 IPR013793 Porin, Gram-negative type, conserved site Y11_17701 52f2162d99949071a361d0e4997c0f42 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 27 245 2.4E-36 T 13-10-2018 Y11_17701 52f2162d99949071a361d0e4997c0f42 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 7.3E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_17701 52f2162d99949071a361d0e4997c0f42 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 7.3E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_17701 52f2162d99949071a361d0e4997c0f42 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 7.3E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_17701 52f2162d99949071a361d0e4997c0f42 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 7.3E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_17701 52f2162d99949071a361d0e4997c0f42 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 7.3E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_17701 52f2162d99949071a361d0e4997c0f42 248 Gene3D G3DSA:3.40.50.720 14 247 1.0E-54 T 13-10-2018 Y11_17701 52f2162d99949071a361d0e4997c0f42 248 SUPERFAMILY SSF51735 18 245 3.38E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_34601 cc8969b3d0764031c5642ba2c977113b 605 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 419 540 3.1E-27 T 13-10-2018 IPR025299 CstA, C-terminal domain Y11_34601 cc8969b3d0764031c5642ba2c977113b 605 Pfam PF02554 Carbon starvation protein CstA 6 369 9.7E-139 T 13-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 Y11_35101 8e4aef73e8e7ad8c81e2fbe13a075826 431 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 5.4E-34 T 13-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Y11_35101 8e4aef73e8e7ad8c81e2fbe13a075826 431 Gene3D G3DSA:3.30.470.20 191 329 1.6E-61 T 13-10-2018 Y11_35101 8e4aef73e8e7ad8c81e2fbe13a075826 431 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 422 2.6E-29 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Y11_35101 8e4aef73e8e7ad8c81e2fbe13a075826 431 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 43.67 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Y11_35101 8e4aef73e8e7ad8c81e2fbe13a075826 431 Gene3D G3DSA:3.30.1490.20 122 190 1.3E-27 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Y11_35101 8e4aef73e8e7ad8c81e2fbe13a075826 431 SUPERFAMILY SSF56059 104 323 7.78E-69 T 13-10-2018 Y11_35101 8e4aef73e8e7ad8c81e2fbe13a075826 431 SUPERFAMILY SSF51246 329 425 4.34E-34 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Y11_35101 8e4aef73e8e7ad8c81e2fbe13a075826 431 SMART SM01210 330 424 1.3E-55 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Y11_35101 8e4aef73e8e7ad8c81e2fbe13a075826 431 SMART SM01209 103 296 2.3E-141 T 13-10-2018 Y11_35101 8e4aef73e8e7ad8c81e2fbe13a075826 431 SUPERFAMILY SSF52440 1 103 1.19E-35 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Y11_35101 8e4aef73e8e7ad8c81e2fbe13a075826 431 Gene3D G3DSA:3.40.50.20 2 95 7.1E-37 T 13-10-2018 Y11_35101 8e4aef73e8e7ad8c81e2fbe13a075826 431 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 424 5.3E-183 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Y11_35101 8e4aef73e8e7ad8c81e2fbe13a075826 431 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 3.0E-83 T 13-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Y11_35101 8e4aef73e8e7ad8c81e2fbe13a075826 431 Gene3D G3DSA:3.90.600.10 330 425 2.6E-36 T 13-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Y11_35101 8e4aef73e8e7ad8c81e2fbe13a075826 431 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 13-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Y11_01901 c63f3d5da8836c3f085cbb2b29895186 272 PIRSF PIRSF039085 17 272 2.7E-119 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Y11_01901 c63f3d5da8836c3f085cbb2b29895186 272 SUPERFAMILY SSF52540 21 266 6.95E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_01901 c63f3d5da8836c3f085cbb2b29895186 272 SMART SM00382 45 244 1.3E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_01901 c63f3d5da8836c3f085cbb2b29895186 272 Pfam PF00005 ABC transporter 36 196 8.6E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_01901 c63f3d5da8836c3f085cbb2b29895186 272 Gene3D G3DSA:3.40.50.300 16 272 4.1E-84 T 13-10-2018 Y11_01901 c63f3d5da8836c3f085cbb2b29895186 272 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_42531 e353211b23181a2921d5966f91bc443d 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Y11_42531 e353211b23181a2921d5966f91bc443d 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y11_42531 e353211b23181a2921d5966f91bc443d 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y11_42531 e353211b23181a2921d5966f91bc443d 445 Gene3D G3DSA:3.40.50.2300 5 132 2.3E-37 T 13-10-2018 Y11_42531 e353211b23181a2921d5966f91bc443d 445 SUPERFAMILY SSF52172 6 181 1.57E-43 T 13-10-2018 IPR011006 CheY-like superfamily Y11_42531 e353211b23181a2921d5966f91bc443d 445 SMART SM00448 7 118 3.6E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_42531 e353211b23181a2921d5966f91bc443d 445 Gene3D G3DSA:1.10.8.60 308 386 4.0E-22 T 13-10-2018 Y11_42531 e353211b23181a2921d5966f91bc443d 445 SUPERFAMILY SSF52540 136 381 3.33E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_42531 e353211b23181a2921d5966f91bc443d 445 Gene3D G3DSA:3.40.50.300 133 307 8.1E-64 T 13-10-2018 Y11_42531 e353211b23181a2921d5966f91bc443d 445 Gene3D G3DSA:1.10.10.60 387 441 5.8E-10 T 13-10-2018 Y11_42531 e353211b23181a2921d5966f91bc443d 445 SUPERFAMILY SSF46689 388 438 1.08E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_42531 e353211b23181a2921d5966f91bc443d 445 Pfam PF00158 Sigma-54 interaction domain 137 303 2.8E-72 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Y11_42531 e353211b23181a2921d5966f91bc443d 445 Pfam PF00072 Response regulator receiver domain 10 118 1.1E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_42531 e353211b23181a2921d5966f91bc443d 445 SMART SM00382 157 300 3.7E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_01071 614a6ed16ce856f33ef1b5f49d6e41f4 338 PIRSF PIRSF002825 2 338 4.1E-83 T 13-10-2018 IPR026045 Ferric binding protein Y11_01071 614a6ed16ce856f33ef1b5f49d6e41f4 338 Gene3D G3DSA:3.40.190.10 128 313 2.3E-111 T 13-10-2018 Y11_01071 614a6ed16ce856f33ef1b5f49d6e41f4 338 Gene3D G3DSA:3.40.190.10 34 308 2.3E-111 T 13-10-2018 Y11_01071 614a6ed16ce856f33ef1b5f49d6e41f4 338 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 126 143 - T 13-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 Y11_01071 614a6ed16ce856f33ef1b5f49d6e41f4 338 SUPERFAMILY SSF53850 33 331 2.06E-73 T 13-10-2018 Y11_01071 614a6ed16ce856f33ef1b5f49d6e41f4 338 Pfam PF13343 Bacterial extracellular solute-binding protein 81 308 7.6E-26 T 13-10-2018 Y11_40021 7dbf25c514f56ef6450c26f81d4366a9 232 SUPERFAMILY SSF46894 130 229 3.4E-25 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_40021 7dbf25c514f56ef6450c26f81d4366a9 232 Gene3D G3DSA:1.10.10.10 133 232 1.5E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_40021 7dbf25c514f56ef6450c26f81d4366a9 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 1.4E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_40021 7dbf25c514f56ef6450c26f81d4366a9 232 SMART SM00862 151 228 2.1E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_40021 7dbf25c514f56ef6450c26f81d4366a9 232 Pfam PF00072 Response regulator receiver domain 5 114 2.7E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_40021 7dbf25c514f56ef6450c26f81d4366a9 232 Gene3D G3DSA:3.40.50.2300 1 132 1.2E-31 T 13-10-2018 Y11_40021 7dbf25c514f56ef6450c26f81d4366a9 232 SMART SM00448 3 114 3.0E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_40021 7dbf25c514f56ef6450c26f81d4366a9 232 SUPERFAMILY SSF52172 2 130 2.85E-36 T 13-10-2018 IPR011006 CheY-like superfamily Y11_02671 ff7e5cc6ec9d5ee161a5ee537147ce0e 897 SMART SM00387 562 675 1.3E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_02671 ff7e5cc6ec9d5ee161a5ee537147ce0e 897 Gene3D G3DSA:3.30.565.10 517 680 3.5E-19 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_02671 ff7e5cc6ec9d5ee161a5ee537147ce0e 897 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 9 892 26.28 T 13-10-2018 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 Y11_02671 ff7e5cc6ec9d5ee161a5ee537147ce0e 897 Pfam PF16359 RcsD-ABL domain 684 786 1.8E-39 T 13-10-2018 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain Y11_02671 ff7e5cc6ec9d5ee161a5ee537147ce0e 897 Gene3D G3DSA:1.20.120.160 797 895 6.4E-10 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Y11_02671 ff7e5cc6ec9d5ee161a5ee537147ce0e 897 SMART SM00388 450 515 8.6E-6 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_02671 ff7e5cc6ec9d5ee161a5ee537147ce0e 897 SUPERFAMILY SSF47226 787 891 8.37E-19 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Y11_02671 ff7e5cc6ec9d5ee161a5ee537147ce0e 897 SUPERFAMILY SSF55874 504 673 1.24E-17 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_02671 ff7e5cc6ec9d5ee161a5ee537147ce0e 897 Gene3D G3DSA:1.10.287.130 425 513 3.7E-5 T 13-10-2018 Y11_02671 ff7e5cc6ec9d5ee161a5ee537147ce0e 897 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 671 6.9E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_02671 ff7e5cc6ec9d5ee161a5ee537147ce0e 897 Pfam PF01627 Hpt domain 812 891 2.3E-9 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Y11_02671 ff7e5cc6ec9d5ee161a5ee537147ce0e 897 SUPERFAMILY SSF47384 435 515 2.16E-7 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_02671 ff7e5cc6ec9d5ee161a5ee537147ce0e 897 Gene3D G3DSA:3.40.50.11620 683 796 6.0E-42 T 13-10-2018 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily Y11_27581 9f85b7ef98bbfb13e1304a10e2e48fd4 348 Gene3D G3DSA:3.20.20.70 25 266 1.4E-72 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_27581 9f85b7ef98bbfb13e1304a10e2e48fd4 348 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 27 341 6.8E-161 T 13-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 Y11_27581 9f85b7ef98bbfb13e1304a10e2e48fd4 348 Pfam PF01207 Dihydrouridine synthase (Dus) 30 330 1.4E-93 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Y11_27581 9f85b7ef98bbfb13e1304a10e2e48fd4 348 PIRSF PIRSF006621 21 341 4.7E-70 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Y11_27581 9f85b7ef98bbfb13e1304a10e2e48fd4 348 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 21 343 52.657 T 13-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 Y11_27581 9f85b7ef98bbfb13e1304a10e2e48fd4 348 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 108 126 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Y11_27581 9f85b7ef98bbfb13e1304a10e2e48fd4 348 SUPERFAMILY SSF51395 27 334 7.33E-72 T 13-10-2018 Y11_27581 9f85b7ef98bbfb13e1304a10e2e48fd4 348 Gene3D G3DSA:1.20.120.1460 273 344 2.0E-21 T 13-10-2018 Y11_21121 4475fced59c22d0861ea2eeb96413594 170 Pfam PF01497 Periplasmic binding protein 12 110 2.2E-9 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain Y11_21121 4475fced59c22d0861ea2eeb96413594 170 SUPERFAMILY SSF53807 14 158 3.65E-20 T 13-10-2018 Y11_21121 4475fced59c22d0861ea2eeb96413594 170 Gene3D G3DSA:3.40.50.1980 2 166 3.8E-43 T 13-10-2018 Y11_00771 1122419b1c18dc6b3d9076bc15c81b57 327 SMART SM00771 187 317 2.6E-79 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 Y11_00771 1122419b1c18dc6b3d9076bc15c81b57 327 Gene3D G3DSA:3.30.1400.10 185 325 1.7E-54 T 13-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 Y11_00771 1122419b1c18dc6b3d9076bc15c81b57 327 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 319 24.871 T 13-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 Y11_00771 1122419b1c18dc6b3d9076bc15c81b57 327 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 190 316 3.1E-49 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 Y11_00771 1122419b1c18dc6b3d9076bc15c81b57 327 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 210 324 4.0E-61 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 Y11_00771 1122419b1c18dc6b3d9076bc15c81b57 327 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 317 8.3E-83 T 13-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 Y11_00771 1122419b1c18dc6b3d9076bc15c81b57 327 SUPERFAMILY SSF64383 188 321 1.07E-48 T 13-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 Y11_39211 51b7d8c495feb00cc4bb9a56a66c216a 488 Gene3D G3DSA:3.40.50.300 211 482 2.8E-98 T 13-10-2018 Y11_39211 51b7d8c495feb00cc4bb9a56a66c216a 488 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 18 74 2.9E-5 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal Y11_39211 51b7d8c495feb00cc4bb9a56a66c216a 488 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 304 318 - T 13-10-2018 IPR001482 Type II/IV secretion system protein Y11_39211 51b7d8c495feb00cc4bb9a56a66c216a 488 Pfam PF00437 Type II/IV secretion system protein 117 376 8.2E-79 T 13-10-2018 IPR001482 Type II/IV secretion system protein Y11_39211 51b7d8c495feb00cc4bb9a56a66c216a 488 SUPERFAMILY SSF160246 18 74 7.59E-6 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Y11_39211 51b7d8c495feb00cc4bb9a56a66c216a 488 SUPERFAMILY SSF52540 91 478 7.12E-93 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_39211 51b7d8c495feb00cc4bb9a56a66c216a 488 Gene3D G3DSA:3.30.450.90 75 210 2.0E-40 T 13-10-2018 Y11_06011 7f1cd0e5e010971842f941e05a46a4be 317 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 29 252 2.3E-9 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Y11_06011 7f1cd0e5e010971842f941e05a46a4be 317 SUPERFAMILY SSF56219 27 313 5.76E-16 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Y11_05071 196c34d0791894a95e2b1ccc127f15e9 244 SUPERFAMILY SSF54862 40 222 1.26E-65 T 13-10-2018 Y11_05071 196c34d0791894a95e2b1ccc127f15e9 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 132 143 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_05071 196c34d0791894a95e2b1ccc127f15e9 244 Pfam PF13247 4Fe-4S dicluster domain 94 187 2.0E-29 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_05071 196c34d0791894a95e2b1ccc127f15e9 244 Gene3D G3DSA:3.30.70.20 85 240 7.3E-58 T 13-10-2018 Y11_05071 196c34d0791894a95e2b1ccc127f15e9 244 Gene3D G3DSA:3.30.70.20 30 84 2.6E-9 T 13-10-2018 Y11_00781 2330b300adf15b721a58215847b15b19 672 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 2.7E-11 T 13-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 Y11_00781 2330b300adf15b721a58215847b15b19 672 Hamap MF_01588 DNA ligase [ligA]. 2 668 54.908 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Y11_00781 2330b300adf15b721a58215847b15b19 672 SMART SM00532 3 448 3.0E-285 T 13-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Y11_00781 2330b300adf15b721a58215847b15b19 672 Gene3D G3DSA:3.30.470.30 70 253 3.0E-102 T 13-10-2018 Y11_00781 2330b300adf15b721a58215847b15b19 672 Pfam PF12826 Helix-hairpin-helix motif 510 573 4.2E-23 T 13-10-2018 Y11_00781 2330b300adf15b721a58215847b15b19 672 Gene3D G3DSA:3.40.50.10190 591 672 3.9E-26 T 13-10-2018 IPR036420 BRCT domain superfamily Y11_00781 2330b300adf15b721a58215847b15b19 672 Gene3D G3DSA:2.40.50.140 317 390 1.7E-34 T 13-10-2018 Y11_00781 2330b300adf15b721a58215847b15b19 672 Gene3D G3DSA:1.10.150.20 506 585 5.5E-29 T 13-10-2018 Y11_00781 2330b300adf15b721a58215847b15b19 672 Pfam PF14520 Helix-hairpin-helix domain 446 502 3.6E-6 T 13-10-2018 Y11_00781 2330b300adf15b721a58215847b15b19 672 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 13-10-2018 IPR018239 NAD-dependent DNA ligase, active site Y11_00781 2330b300adf15b721a58215847b15b19 672 Gene3D G3DSA:1.10.150.20 432 505 7.4E-30 T 13-10-2018 Y11_00781 2330b300adf15b721a58215847b15b19 672 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 318 1.6E-136 T 13-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Y11_00781 2330b300adf15b721a58215847b15b19 672 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 1.6E-36 T 13-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Y11_00781 2330b300adf15b721a58215847b15b19 672 SUPERFAMILY SSF56091 2 316 1.04E-123 T 13-10-2018 Y11_00781 2330b300adf15b721a58215847b15b19 672 Gene3D G3DSA:2.20.70.80 391 431 1.1E-21 T 13-10-2018 Y11_00781 2330b300adf15b721a58215847b15b19 672 PIRSF PIRSF001604 1 672 8.0E-260 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Y11_00781 2330b300adf15b721a58215847b15b19 672 SMART SM00292 594 671 3.3E-15 T 13-10-2018 IPR001357 BRCT domain Y11_00781 2330b300adf15b721a58215847b15b19 672 SUPERFAMILY SSF52113 595 668 6.73E-19 T 13-10-2018 IPR036420 BRCT domain superfamily Y11_00781 2330b300adf15b721a58215847b15b19 672 Gene3D G3DSA:1.10.287.610 1 69 3.5E-31 T 13-10-2018 Y11_00781 2330b300adf15b721a58215847b15b19 672 SUPERFAMILY SSF47781 404 578 2.78E-61 T 13-10-2018 IPR010994 RuvA domain 2-like Y11_00781 2330b300adf15b721a58215847b15b19 672 Gene3D G3DSA:3.30.1490.70 78 316 3.0E-102 T 13-10-2018 Y11_00781 2330b300adf15b721a58215847b15b19 672 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 664 1.2E-270 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Y11_00781 2330b300adf15b721a58215847b15b19 672 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 13-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site Y11_00781 2330b300adf15b721a58215847b15b19 672 SUPERFAMILY SSF50249 318 400 2.23E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_00781 2330b300adf15b721a58215847b15b19 672 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 667 1.5E-12 T 13-10-2018 IPR001357 BRCT domain Y11_00781 2330b300adf15b721a58215847b15b19 672 SMART SM00278 512 531 200.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Y11_00781 2330b300adf15b721a58215847b15b19 672 SMART SM00278 544 563 29.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Y11_00781 2330b300adf15b721a58215847b15b19 672 SMART SM00278 446 465 17.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Y11_00781 2330b300adf15b721a58215847b15b19 672 SMART SM00278 480 499 3.5 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Y11_00981 e6e3e4714523a840b32c3cd4a27aea00 171 Gene3D G3DSA:3.40.630.30 1 170 1.1E-37 T 13-10-2018 Y11_00981 e6e3e4714523a840b32c3cd4a27aea00 171 SUPERFAMILY SSF55729 4 163 7.33E-41 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_00981 e6e3e4714523a840b32c3cd4a27aea00 171 Pfam PF13302 Acetyltransferase (GNAT) domain 2 139 6.3E-24 T 13-10-2018 IPR000182 GNAT domain Y11_16251 c3de50493f7b71497f07176c5ab6277e 165 TIGRFAM TIGR04493 microcomp_PduM: microcompartment protein PduM 9 161 7.3E-56 T 13-10-2018 IPR030992 Microcompartment protein PduM GO:0005198 Y11_16251 c3de50493f7b71497f07176c5ab6277e 165 Pfam PF15953 Putative propanediol utilisation 9 160 1.3E-41 T 13-10-2018 IPR030992 Microcompartment protein PduM GO:0005198 Y11_40911 e7d0efa827b818c4c0ff943cf6d97de6 251 Gene3D G3DSA:1.10.150.20 162 251 1.0E-28 T 13-10-2018 Y11_40911 e7d0efa827b818c4c0ff943cf6d97de6 251 SUPERFAMILY SSF47807 160 242 9.42E-23 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Y11_40911 e7d0efa827b818c4c0ff943cf6d97de6 251 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 250 9.6E-26 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Y11_40911 e7d0efa827b818c4c0ff943cf6d97de6 251 SUPERFAMILY SSF88723 4 159 5.49E-41 T 13-10-2018 IPR029060 PIN-like domain superfamily Y11_40911 e7d0efa827b818c4c0ff943cf6d97de6 251 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 44.948 T 13-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 Y11_40911 e7d0efa827b818c4c0ff943cf6d97de6 251 SMART SM00475 3 250 1.3E-93 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Y11_40911 e7d0efa827b818c4c0ff943cf6d97de6 251 Gene3D G3DSA:3.40.50.1010 1 161 3.5E-59 T 13-10-2018 Y11_40911 e7d0efa827b818c4c0ff943cf6d97de6 251 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 159 1.7E-32 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Y11_40911 e7d0efa827b818c4c0ff943cf6d97de6 251 SMART SM00279 162 197 3.9E-10 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Y11_08411 a6043054a9b31aeefdf7655ee189a10e 674 Pfam PF04632 Fusaric acid resistance protein family 20 661 4.9E-189 T 13-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 Y11_17161 aced84f8b397561cff6e46bb7633c07f 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_17161 aced84f8b397561cff6e46bb7633c07f 506 Pfam PF00005 ABC transporter 29 178 2.2E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_17161 aced84f8b397561cff6e46bb7633c07f 506 Gene3D G3DSA:3.40.50.300 252 503 3.3E-37 T 13-10-2018 Y11_17161 aced84f8b397561cff6e46bb7633c07f 506 Pfam PF00005 ABC transporter 280 434 7.1E-17 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_17161 aced84f8b397561cff6e46bb7633c07f 506 SUPERFAMILY SSF52540 254 492 1.81E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_17161 aced84f8b397561cff6e46bb7633c07f 506 Gene3D G3DSA:3.40.50.300 2 251 6.6E-59 T 13-10-2018 Y11_17161 aced84f8b397561cff6e46bb7633c07f 506 SMART SM00382 288 483 2.2 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_17161 aced84f8b397561cff6e46bb7633c07f 506 SMART SM00382 38 233 5.5E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_17161 aced84f8b397561cff6e46bb7633c07f 506 SUPERFAMILY SSF52540 12 236 2.13E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_04181 fa81c946ecc97bec998ccc842387b82f 349 Gene3D G3DSA:3.40.640.10 5 245 1.5E-92 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_04181 fa81c946ecc97bec998ccc842387b82f 349 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 176 195 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Y11_04181 fa81c946ecc97bec998ccc842387b82f 349 PIRSF PIRSF000525 1 349 6.2E-144 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Y11_04181 fa81c946ecc97bec998ccc842387b82f 349 Gene3D G3DSA:3.90.1150.10 246 349 1.0E-39 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_04181 fa81c946ecc97bec998ccc842387b82f 349 SUPERFAMILY SSF53383 1 349 1.2E-112 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_04181 fa81c946ecc97bec998ccc842387b82f 349 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 1 348 3.8E-150 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Y11_04181 fa81c946ecc97bec998ccc842387b82f 349 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 348 47.789 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Y11_04181 fa81c946ecc97bec998ccc842387b82f 349 Pfam PF00266 Aminotransferase class-V 2 337 9.1E-63 T 13-10-2018 IPR000192 Aminotransferase class V domain Y11_38001 b391fe7726f9317292377dda96f421fa 204 SMART SM00749 62 125 1.1E-11 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Y11_38001 b391fe7726f9317292377dda96f421fa 204 SMART SM00749 141 204 1.7E-10 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Y11_38001 b391fe7726f9317292377dda96f421fa 204 Pfam PF04972 BON domain 58 124 1.2E-21 T 13-10-2018 IPR007055 BON domain Y11_38001 b391fe7726f9317292377dda96f421fa 204 Pfam PF04972 BON domain 137 204 2.7E-18 T 13-10-2018 IPR007055 BON domain Y11_05211 613d69221abc499a12b9693ff3509979 319 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 314 5.8E-93 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_05211 613d69221abc499a12b9693ff3509979 319 Pfam PF00849 RNA pseudouridylate synthase 102 249 4.9E-31 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_05211 613d69221abc499a12b9693ff3509979 319 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_05211 613d69221abc499a12b9693ff3509979 319 SUPERFAMILY SSF55174 19 70 2.94E-8 T 13-10-2018 Y11_05211 613d69221abc499a12b9693ff3509979 319 SUPERFAMILY SSF55120 95 314 5.12E-64 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_05211 613d69221abc499a12b9693ff3509979 319 Pfam PF01479 S4 domain 20 66 4.4E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_05211 613d69221abc499a12b9693ff3509979 319 Gene3D G3DSA:3.30.2350.10 92 317 3.2E-84 T 13-10-2018 Y11_05211 613d69221abc499a12b9693ff3509979 319 SMART SM00363 20 79 2.5E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_05211 613d69221abc499a12b9693ff3509979 319 Gene3D G3DSA:3.10.290.10 9 72 5.4E-16 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Y11_18081 af85435d16f78f9775128701bf77e080 159 Pfam PF01967 MoaC family 15 150 7.9E-54 T 13-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Y11_18081 af85435d16f78f9775128701bf77e080 159 Gene3D G3DSA:3.30.70.640 1 159 9.8E-70 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Y11_18081 af85435d16f78f9775128701bf77e080 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 35.873 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Y11_18081 af85435d16f78f9775128701bf77e080 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 9.5E-71 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Y11_18081 af85435d16f78f9775128701bf77e080 159 SUPERFAMILY SSF55040 11 155 2.22E-60 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Y11_29661 6faaad06bf239dff15bf5e99b642f8d4 629 SMART SM01228 546 617 5.5E-45 T 13-10-2018 Y11_29661 6faaad06bf239dff15bf5e99b642f8d4 629 Gene3D G3DSA:1.10.150.570 570 622 1.6E-23 T 13-10-2018 Y11_29661 6faaad06bf239dff15bf5e99b642f8d4 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 3.2E-295 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Y11_29661 6faaad06bf239dff15bf5e99b642f8d4 629 Pfam PF01134 Glucose inhibited division protein A 8 398 2.4E-169 T 13-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Y11_29661 6faaad06bf239dff15bf5e99b642f8d4 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Y11_29661 6faaad06bf239dff15bf5e99b642f8d4 629 SUPERFAMILY SSF51905 6 261 5.65E-50 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_29661 6faaad06bf239dff15bf5e99b642f8d4 629 Gene3D G3DSA:3.50.50.60 294 458 6.4E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_29661 6faaad06bf239dff15bf5e99b642f8d4 629 Gene3D G3DSA:3.50.50.60 2 244 2.2E-91 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_29661 6faaad06bf239dff15bf5e99b642f8d4 629 Gene3D G3DSA:1.10.10.1800 459 550 2.0E-31 T 13-10-2018 Y11_29661 6faaad06bf239dff15bf5e99b642f8d4 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Y11_29661 6faaad06bf239dff15bf5e99b642f8d4 629 Pfam PF13932 GidA associated domain 403 616 1.3E-76 T 13-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 Y11_29661 6faaad06bf239dff15bf5e99b642f8d4 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.746 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Y11_04231 3b665c0bfa33aa6d8d5a2ae057be9b35 761 Pfam PF03772 Competence protein 207 474 3.0E-53 T 13-10-2018 IPR004477 ComEC/Rec2-related protein Y11_04231 3b665c0bfa33aa6d8d5a2ae057be9b35 761 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 71 725 6.8E-178 T 13-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 Y11_04231 3b665c0bfa33aa6d8d5a2ae057be9b35 761 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 228 411 3.0E-37 T 13-10-2018 IPR004477 ComEC/Rec2-related protein Y11_04231 3b665c0bfa33aa6d8d5a2ae057be9b35 761 SUPERFAMILY SSF56281 502 749 2.1E-46 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_04231 3b665c0bfa33aa6d8d5a2ae057be9b35 761 SMART SM00849 512 696 6.1E-11 T 13-10-2018 IPR001279 Metallo-beta-lactamase Y11_04231 3b665c0bfa33aa6d8d5a2ae057be9b35 761 Pfam PF13567 Domain of unknown function (DUF4131) 32 160 1.1E-8 T 13-10-2018 IPR025405 Domain of unknown function DUF4131 Y11_04231 3b665c0bfa33aa6d8d5a2ae057be9b35 761 Gene3D G3DSA:3.60.15.10 501 738 6.2E-48 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_04231 3b665c0bfa33aa6d8d5a2ae057be9b35 761 Pfam PF00753 Metallo-beta-lactamase superfamily 512 687 6.2E-19 T 13-10-2018 IPR001279 Metallo-beta-lactamase Y11_16001 1153cb9ef937bf8a70d49fbe6dc090e7 237 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 94 126 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_16001 1153cb9ef937bf8a70d49fbe6dc090e7 237 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 3 231 7.9E-76 T 13-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 Y11_16001 1153cb9ef937bf8a70d49fbe6dc090e7 237 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 210 2.7E-44 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Y11_16001 1153cb9ef937bf8a70d49fbe6dc090e7 237 Gene3D G3DSA:3.30.950.10 128 236 1.1E-17 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Y11_16001 1153cb9ef937bf8a70d49fbe6dc090e7 237 PIRSF PIRSF036427 1 236 3.4E-70 T 13-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 Y11_16001 1153cb9ef937bf8a70d49fbe6dc090e7 237 SUPERFAMILY SSF53790 1 234 4.58E-42 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Y11_16001 1153cb9ef937bf8a70d49fbe6dc090e7 237 Gene3D G3DSA:3.40.1010.10 1 127 2.9E-28 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Y11_18461 d5d376f7f75164d1d9c41d286b7664bb 168 ProSitePatterns PS01068 OmpA-like domain. 100 144 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 Y11_18461 d5d376f7f75164d1d9c41d286b7664bb 168 Gene3D G3DSA:3.30.1330.60 39 168 5.8E-48 T 13-10-2018 IPR036737 OmpA-like domain superfamily Y11_18461 d5d376f7f75164d1d9c41d286b7664bb 168 Pfam PF00691 OmpA family 67 162 5.1E-21 T 13-10-2018 IPR006665 OmpA-like domain Y11_18461 d5d376f7f75164d1d9c41d286b7664bb 168 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 66 168 3.9E-46 T 13-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 Y11_18461 d5d376f7f75164d1d9c41d286b7664bb 168 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 168 31.775 T 13-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 Y11_18461 d5d376f7f75164d1d9c41d286b7664bb 168 PRINTS PR01021 OMPA domain signature 113 129 2.9E-17 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Y11_18461 d5d376f7f75164d1d9c41d286b7664bb 168 PRINTS PR01021 OMPA domain signature 68 90 2.9E-17 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Y11_18461 d5d376f7f75164d1d9c41d286b7664bb 168 PRINTS PR01021 OMPA domain signature 98 113 2.9E-17 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Y11_18461 d5d376f7f75164d1d9c41d286b7664bb 168 SUPERFAMILY SSF103088 56 167 2.22E-34 T 13-10-2018 IPR036737 OmpA-like domain superfamily Y11_02391 351c3a0f4cb4383aea2bcfb7bd0b7f8c 168 SUPERFAMILY SSF143744 14 152 8.37E-25 T 13-10-2018 IPR038084 GlcG-like domain superfamily Y11_02391 351c3a0f4cb4383aea2bcfb7bd0b7f8c 168 Gene3D G3DSA:3.30.450.150 1 156 2.3E-44 T 13-10-2018 IPR038084 GlcG-like domain superfamily Y11_02391 351c3a0f4cb4383aea2bcfb7bd0b7f8c 168 PIRSF PIRSF008757 1 164 5.0E-58 T 13-10-2018 IPR010371 Uncharacterised protein family UPF0303 Y11_02391 351c3a0f4cb4383aea2bcfb7bd0b7f8c 168 Hamap MF_00761 UPF0303 protein . 2 155 33.729 T 13-10-2018 IPR010371 Uncharacterised protein family UPF0303 Y11_02391 351c3a0f4cb4383aea2bcfb7bd0b7f8c 168 Pfam PF03928 Haem-degrading 22 147 5.1E-27 T 13-10-2018 IPR005624 Haem-degrading Y11_42741 78166110c95e799705f092314339fb64 175 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.378 T 13-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Y11_42741 78166110c95e799705f092314339fb64 175 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 1.4E-51 T 13-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Y11_42741 78166110c95e799705f092314339fb64 175 SUPERFAMILY SSF46565 1 74 2.49E-18 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Y11_42741 78166110c95e799705f092314339fb64 175 Pfam PF00226 DnaJ domain 2 70 6.0E-7 T 13-10-2018 IPR001623 DnaJ domain Y11_42741 78166110c95e799705f092314339fb64 175 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 163 4.4E-16 T 13-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Y11_42741 78166110c95e799705f092314339fb64 175 Gene3D G3DSA:1.20.1280.20 80 171 2.1E-24 T 13-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Y11_42741 78166110c95e799705f092314339fb64 175 SUPERFAMILY SSF47144 78 171 7.85E-25 T 13-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Y11_42741 78166110c95e799705f092314339fb64 175 SMART SM00271 1 66 2.1E-10 T 13-10-2018 IPR001623 DnaJ domain Y11_42741 78166110c95e799705f092314339fb64 175 Gene3D G3DSA:1.10.287.110 1 79 6.5E-24 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Y11_05341 38dee00fde9d689816c3de6432ddb09a 344 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 21 210 9.9E-61 T 13-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_05341 38dee00fde9d689816c3de6432ddb09a 344 Gene3D G3DSA:3.40.50.300 10 175 8.0E-45 T 13-10-2018 Y11_05341 38dee00fde9d689816c3de6432ddb09a 344 Gene3D G3DSA:1.20.272.10 217 339 1.7E-40 T 13-10-2018 Y11_05341 38dee00fde9d689816c3de6432ddb09a 344 SUPERFAMILY SSF52540 10 215 2.82E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_05341 38dee00fde9d689816c3de6432ddb09a 344 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 216 331 1.5E-40 T 13-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_05341 38dee00fde9d689816c3de6432ddb09a 344 SUPERFAMILY SSF48019 217 338 3.57E-36 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Y11_05341 38dee00fde9d689816c3de6432ddb09a 344 Pfam PF13177 DNA polymerase III, delta subunit 18 173 4.8E-38 T 13-10-2018 Y11_24091 f2ade7ff40cd7d5fd981c425a42c38dd 228 Pfam PF04542 Sigma-70 region 2 18 89 4.0E-12 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Y11_24091 f2ade7ff40cd7d5fd981c425a42c38dd 228 SUPERFAMILY SSF88659 155 227 4.49E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Y11_24091 f2ade7ff40cd7d5fd981c425a42c38dd 228 SUPERFAMILY SSF88946 16 88 1.83E-17 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Y11_24091 f2ade7ff40cd7d5fd981c425a42c38dd 228 SUPERFAMILY SSF88659 90 151 5.67E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Y11_24091 f2ade7ff40cd7d5fd981c425a42c38dd 228 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 226 5.1E-31 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Y11_24091 f2ade7ff40cd7d5fd981c425a42c38dd 228 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 18 226 7.2E-64 T 13-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Y11_24091 f2ade7ff40cd7d5fd981c425a42c38dd 228 Pfam PF04545 Sigma-70, region 4 177 225 3.2E-11 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Y11_24091 f2ade7ff40cd7d5fd981c425a42c38dd 228 Gene3D G3DSA:1.10.1740.10 4 85 4.2E-17 T 13-10-2018 Y11_24091 f2ade7ff40cd7d5fd981c425a42c38dd 228 Pfam PF04539 Sigma-70 region 3 98 138 2.5E-8 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Y11_24091 f2ade7ff40cd7d5fd981c425a42c38dd 228 Gene3D G3DSA:1.20.140.160 87 228 3.5E-32 T 13-10-2018 Y11_00091 a3cadd5d7b074735e9dc8edc7f41646f 237 SUPERFAMILY SSF56104 2 232 1.93E-75 T 13-10-2018 Y11_00091 a3cadd5d7b074735e9dc8edc7f41646f 237 Gene3D G3DSA:3.30.200.20 7 231 6.3E-90 T 13-10-2018 Y11_00091 a3cadd5d7b074735e9dc8edc7f41646f 237 Pfam PF01259 SAICAR synthetase 7 231 4.2E-58 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Y11_00091 a3cadd5d7b074735e9dc8edc7f41646f 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.801 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Y11_00091 a3cadd5d7b074735e9dc8edc7f41646f 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Y11_00091 a3cadd5d7b074735e9dc8edc7f41646f 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Y11_00091 a3cadd5d7b074735e9dc8edc7f41646f 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 2.2E-79 T 13-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 Y11_00091 a3cadd5d7b074735e9dc8edc7f41646f 237 Gene3D G3DSA:3.30.470.20 85 220 6.3E-90 T 13-10-2018 Y11_42941 e4c760224c372d9ca7ef76cb0c0db34a 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 2.2E-57 T 13-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 Y11_42941 e4c760224c372d9ca7ef76cb0c0db34a 206 SUPERFAMILY SSF48452 91 191 1.07E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_42941 e4c760224c372d9ca7ef76cb0c0db34a 206 Gene3D G3DSA:1.25.40.10 43 204 9.6E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_42941 e4c760224c372d9ca7ef76cb0c0db34a 206 PIRSF PIRSF006170 1 206 9.8E-58 T 13-10-2018 IPR026039 Uncharacterised protein family UPF0070 Y11_09881 1a5c18be78499a57486d80bf0325f0e2 430 Pfam PF07690 Major Facilitator Superfamily 52 269 2.5E-26 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_09881 1a5c18be78499a57486d80bf0325f0e2 430 Gene3D G3DSA:1.20.1250.20 252 426 4.8E-11 T 13-10-2018 Y11_09881 1a5c18be78499a57486d80bf0325f0e2 430 SUPERFAMILY SSF103473 35 423 3.66E-58 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_09881 1a5c18be78499a57486d80bf0325f0e2 430 Gene3D G3DSA:1.20.1250.20 44 242 2.6E-30 T 13-10-2018 Y11_09881 1a5c18be78499a57486d80bf0325f0e2 430 ProSitePatterns PS00216 Sugar transport proteins signature 1. 101 117 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Y11_00071 dce93ef3791bea5874bab75a9662da44 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 7.9E-34 T 13-10-2018 IPR002220 DapA-like GO:0016829 Y11_00071 dce93ef3791bea5874bab75a9662da44 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 7.9E-34 T 13-10-2018 IPR002220 DapA-like GO:0016829 Y11_00071 dce93ef3791bea5874bab75a9662da44 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 7.9E-34 T 13-10-2018 IPR002220 DapA-like GO:0016829 Y11_00071 dce93ef3791bea5874bab75a9662da44 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 7.9E-34 T 13-10-2018 IPR002220 DapA-like GO:0016829 Y11_00071 dce93ef3791bea5874bab75a9662da44 293 PIRSF PIRSF001365 1 293 1.8E-94 T 13-10-2018 IPR002220 DapA-like GO:0016829 Y11_00071 dce93ef3791bea5874bab75a9662da44 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 13-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Y11_00071 dce93ef3791bea5874bab75a9662da44 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 289 6.1E-120 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Y11_00071 dce93ef3791bea5874bab75a9662da44 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 13-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Y11_00071 dce93ef3791bea5874bab75a9662da44 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 289 64.828 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Y11_00071 dce93ef3791bea5874bab75a9662da44 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 289 4.3E-114 T 13-10-2018 IPR002220 DapA-like GO:0016829 Y11_00071 dce93ef3791bea5874bab75a9662da44 293 SUPERFAMILY SSF51569 2 291 9.0E-98 T 13-10-2018 Y11_00071 dce93ef3791bea5874bab75a9662da44 293 SMART SM01130 1 291 1.9E-143 T 13-10-2018 IPR002220 DapA-like GO:0016829 Y11_00071 dce93ef3791bea5874bab75a9662da44 293 Gene3D G3DSA:3.20.20.70 1 293 2.1E-112 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_11761 2b931c43cba15b72aebb070eaf3dd11f 321 PIRSF PIRSF026649 11 315 1.5E-91 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Y11_11761 2b931c43cba15b72aebb070eaf3dd11f 321 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 5 311 53.47 T 13-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 Y11_11761 2b931c43cba15b72aebb070eaf3dd11f 321 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 14 306 2.2E-94 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Y11_11761 2b931c43cba15b72aebb070eaf3dd11f 321 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 11 315 3.4E-132 T 13-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 Y11_18041 5cf8515adf39679a7616b26cc5f98caa 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 1.4E-6 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Y11_18041 5cf8515adf39679a7616b26cc5f98caa 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 1.4E-6 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Y11_18041 5cf8515adf39679a7616b26cc5f98caa 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 1.4E-6 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Y11_18041 5cf8515adf39679a7616b26cc5f98caa 368 Pfam PF12698 ABC-2 family transporter protein 25 354 1.1E-48 T 13-10-2018 Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 Gene3D G3DSA:3.40.50.300 373 565 6.9E-49 T 13-10-2018 Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 696 714 1.1E-31 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 729 743 1.1E-31 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 622 640 1.1E-31 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 667 685 1.1E-31 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 232 363 5.2E-10 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 Gene3D G3DSA:3.40.50.300 571 788 5.2E-64 T 13-10-2018 Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 SUPERFAMILY SSF52540 569 861 2.97E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 SMART SM01086 790 881 6.4E-13 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 652 670 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 Gene3D G3DSA:1.10.8.60 790 886 1.1E-12 T 13-10-2018 Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 Gene3D G3DSA:3.40.50.300 178 371 9.6E-61 T 13-10-2018 Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 Gene3D G3DSA:1.10.1780.10 1 160 1.3E-38 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 861 0.0 T 13-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 SUPERFAMILY SSF81923 15 126 2.35E-17 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 SUPERFAMILY SSF52540 190 525 1.97E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 SMART SM00382 227 368 1.9E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 SMART SM00382 618 769 4.8E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 790 862 1.5E-14 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 Pfam PF07724 AAA domain (Cdc48 subfamily) 618 784 1.9E-37 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Y11_15761 4f6205598c78639fe4d81f0e6be85079 889 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 323 335 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Y11_35691 30e69c3bb705add09979ec99329a59b3 279 Gene3D G3DSA:3.40.50.1980 25 146 1.1E-41 T 13-10-2018 Y11_35691 30e69c3bb705add09979ec99329a59b3 279 Pfam PF01497 Periplasmic binding protein 29 253 2.4E-30 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain Y11_35691 30e69c3bb705add09979ec99329a59b3 279 SUPERFAMILY SSF53807 26 273 1.41E-49 T 13-10-2018 Y11_35691 30e69c3bb705add09979ec99329a59b3 279 Gene3D G3DSA:3.40.50.1980 147 279 3.6E-53 T 13-10-2018 Y11_43281 ac34b74357dca86b95cdb169cf3dffd6 458 SUPERFAMILY SSF47384 217 298 4.9E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_43281 ac34b74357dca86b95cdb169cf3dffd6 458 Gene3D G3DSA:3.30.565.10 303 455 5.8E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_43281 ac34b74357dca86b95cdb169cf3dffd6 458 Pfam PF00672 HAMP domain 181 229 5.7E-13 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_43281 ac34b74357dca86b95cdb169cf3dffd6 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 453 2.1E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_43281 ac34b74357dca86b95cdb169cf3dffd6 458 SMART SM00388 234 298 1.1E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_43281 ac34b74357dca86b95cdb169cf3dffd6 458 SMART SM00304 181 233 2.7E-14 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_43281 ac34b74357dca86b95cdb169cf3dffd6 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 297 8.7E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_43281 ac34b74357dca86b95cdb169cf3dffd6 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 3.0E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_43281 ac34b74357dca86b95cdb169cf3dffd6 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 3.0E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_43281 ac34b74357dca86b95cdb169cf3dffd6 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 3.0E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_43281 ac34b74357dca86b95cdb169cf3dffd6 458 SMART SM00387 343 455 2.6E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_43281 ac34b74357dca86b95cdb169cf3dffd6 458 SUPERFAMILY SSF55874 287 453 7.33E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_43281 ac34b74357dca86b95cdb169cf3dffd6 458 SUPERFAMILY SSF158472 182 230 2.88E-10 T 13-10-2018 Y11_43281 ac34b74357dca86b95cdb169cf3dffd6 458 Gene3D G3DSA:1.10.287.130 179 293 1.1E-27 T 13-10-2018 Y11_04621 6967a455b7888d0d2f141ec747f39e2d 151 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.662 T 13-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 Y11_04621 6967a455b7888d0d2f141ec747f39e2d 151 Pfam PF06303 MatP N-terminal domain 2 85 7.7E-44 T 13-10-2018 IPR035087 MatP, N-terminal Y11_04621 6967a455b7888d0d2f141ec747f39e2d 151 Gene3D G3DSA:1.10.1220.10 98 150 4.9E-34 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Y11_04621 6967a455b7888d0d2f141ec747f39e2d 151 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 2.7E-31 T 13-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain Y11_04621 6967a455b7888d0d2f141ec747f39e2d 151 Gene3D G3DSA:1.20.1270.380 1 89 2.5E-47 T 13-10-2018 IPR038339 MatP, N-terminal domain superfamily Y11_04621 6967a455b7888d0d2f141ec747f39e2d 151 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 2.0E-67 T 13-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 Y11_32761 d73ebcb1c6ab5a5d7d44eab1d295feae 274 SUPERFAMILY SSF54534 46 253 3.14E-65 T 13-10-2018 Y11_32761 d73ebcb1c6ab5a5d7d44eab1d295feae 274 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 250 6.4E-29 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Y11_32761 d73ebcb1c6ab5a5d7d44eab1d295feae 274 Gene3D G3DSA:3.10.50.40 147 263 1.1E-42 T 13-10-2018 Y11_32761 d73ebcb1c6ab5a5d7d44eab1d295feae 274 Gene3D G3DSA:1.10.287.460 29 146 2.0E-29 T 13-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 Y11_32761 d73ebcb1c6ab5a5d7d44eab1d295feae 274 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 36 156 6.9E-37 T 13-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 Gene3D G3DSA:2.60.40.10 824 889 5.7E-26 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 SUPERFAMILY SSF51445 338 778 1.02E-139 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 SUPERFAMILY SSF81296 786 889 1.4E-37 T 13-10-2018 IPR014756 Immunoglobulin E-set Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 Gene3D G3DSA:3.30.379.10 209 335 3.6E-26 T 13-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 Pfam PF03173 Putative carbohydrate binding domain 38 196 2.8E-70 T 13-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 532 545 9.7E-44 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 438 455 9.7E-44 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 751 768 9.7E-44 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 361 382 9.7E-44 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 505 523 9.7E-44 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 733 749 9.7E-44 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 332 349 9.7E-44 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 298 318 9.7E-44 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 216 334 1.9E-15 T 13-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 Gene3D G3DSA:3.20.20.80 336 823 1.9E-166 T 13-10-2018 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 Gene3D G3DSA:2.60.40.290 28 169 1.6E-62 T 13-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 SUPERFAMILY SSF49384 29 199 3.35E-69 T 13-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 810 885 2.6E-31 T 13-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 SUPERFAMILY SSF55545 205 337 2.62E-28 T 13-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 338 769 3.8E-111 T 13-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Y11_18941 be0f3690985a8f593a28f3a58c1ec15a 891 SMART SM01081 36 197 3.9E-104 T 13-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Y11_17711 56da298ca122c5e9ff34510d46052f08 264 SUPERFAMILY SSF53850 68 225 3.0E-14 T 13-10-2018 Y11_17711 56da298ca122c5e9ff34510d46052f08 264 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 86 241 4.4E-20 T 13-10-2018 Y11_17711 56da298ca122c5e9ff34510d46052f08 264 Gene3D G3DSA:3.40.190.10 86 225 2.9E-18 T 13-10-2018 Y11_17711 56da298ca122c5e9ff34510d46052f08 264 Gene3D G3DSA:3.40.190.10 88 195 2.9E-18 T 13-10-2018 Y11_03961 3642f984a6c626fa3ac0ed1c4b3796ca 574 SUPERFAMILY SSF52540 334 572 1.88E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_03961 3642f984a6c626fa3ac0ed1c4b3796ca 574 Gene3D G3DSA:1.20.1560.10 4 321 6.6E-28 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_03961 3642f984a6c626fa3ac0ed1c4b3796ca 574 Pfam PF00005 ABC transporter 356 503 1.2E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_03961 3642f984a6c626fa3ac0ed1c4b3796ca 574 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_03961 3642f984a6c626fa3ac0ed1c4b3796ca 574 Gene3D G3DSA:3.40.50.300 332 574 2.9E-77 T 13-10-2018 Y11_03961 3642f984a6c626fa3ac0ed1c4b3796ca 574 SMART SM00382 365 550 5.2E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_03961 3642f984a6c626fa3ac0ed1c4b3796ca 574 SUPERFAMILY SSF90123 7 327 1.11E-40 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_03961 3642f984a6c626fa3ac0ed1c4b3796ca 574 Pfam PF00664 ABC transporter transmembrane region 37 287 9.9E-10 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Y11_03961 3642f984a6c626fa3ac0ed1c4b3796ca 574 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 534 1.7E-158 T 13-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 Y11_02311 d7743e2a725e5eaedbc3666a2d1c4651 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 154 7.7E-34 T 13-10-2018 IPR004375 YhcH/YjgK/YiaL family Y11_02311 d7743e2a725e5eaedbc3666a2d1c4651 155 Pfam PF04074 Domain of unknown function (DUF386) 1 150 6.3E-35 T 13-10-2018 IPR004375 YhcH/YjgK/YiaL family Y11_02311 d7743e2a725e5eaedbc3666a2d1c4651 155 Gene3D G3DSA:2.60.120.370 1 155 9.2E-37 T 13-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily Y11_02311 d7743e2a725e5eaedbc3666a2d1c4651 155 SUPERFAMILY SSF51197 1 154 2.14E-37 T 13-10-2018 Y11_39991 7b8c2e3696bf2e41a2e742273abbcd58 330 Gene3D G3DSA:2.40.30.160 198 319 1.5E-43 T 13-10-2018 Y11_39991 7b8c2e3696bf2e41a2e742273abbcd58 330 PIRSF PIRSF006487 21 325 3.3E-10 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Y11_39991 7b8c2e3696bf2e41a2e742273abbcd58 330 Pfam PF01571 Aminomethyltransferase folate-binding domain 32 216 4.5E-8 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Y11_39991 7b8c2e3696bf2e41a2e742273abbcd58 330 Gene3D G3DSA:3.30.70.1400 28 114 8.9E-60 T 13-10-2018 Y11_39991 7b8c2e3696bf2e41a2e742273abbcd58 330 SUPERFAMILY SSF101790 245 326 5.04E-27 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Y11_39991 7b8c2e3696bf2e41a2e742273abbcd58 330 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 188 253 2.2E-26 T 13-10-2018 IPR017703 YgfZ/GcvT conserved site Y11_39991 7b8c2e3696bf2e41a2e742273abbcd58 330 SUPERFAMILY SSF103025 19 243 3.3E-65 T 13-10-2018 Y11_39991 7b8c2e3696bf2e41a2e742273abbcd58 330 Gene3D G3DSA:3.30.70.1630 25 195 8.9E-60 T 13-10-2018 Y11_39991 7b8c2e3696bf2e41a2e742273abbcd58 330 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 323 50.802 T 13-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 Y11_26011 ca2a5b44f3ace703cc3932052a444cb4 146 Pfam PF00107 Zinc-binding dehydrogenase 42 104 3.6E-11 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Y11_26011 ca2a5b44f3ace703cc3932052a444cb4 146 Gene3D G3DSA:3.90.180.10 1 22 9.3E-44 T 13-10-2018 Y11_26011 ca2a5b44f3ace703cc3932052a444cb4 146 SUPERFAMILY SSF51735 5 116 1.32E-30 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_26011 ca2a5b44f3ace703cc3932052a444cb4 146 Gene3D G3DSA:3.40.50.720 23 115 9.3E-44 T 13-10-2018 Y11_26011 ca2a5b44f3ace703cc3932052a444cb4 146 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 35 62 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Y11_04921 6cecefac1b034545bf09c6dc2fc10bb2 575 Gene3D G3DSA:3.30.70.1450 410 487 4.9E-12 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_04921 6cecefac1b034545bf09c6dc2fc10bb2 575 Pfam PF02080 TrkA-C domain 420 483 2.7E-12 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Y11_04921 6cecefac1b034545bf09c6dc2fc10bb2 575 Gene3D G3DSA:1.20.1530.20 7 391 6.1E-17 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily Y11_04921 6cecefac1b034545bf09c6dc2fc10bb2 575 Pfam PF00999 Sodium/hydrogen exchanger family 15 387 4.2E-57 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Y11_04921 6cecefac1b034545bf09c6dc2fc10bb2 575 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 49.507 T 13-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 Y11_04921 6cecefac1b034545bf09c6dc2fc10bb2 575 SMART SM01091 492 572 1.9E-22 T 13-10-2018 IPR005170 Transporter-associated domain Y11_04921 6cecefac1b034545bf09c6dc2fc10bb2 575 Pfam PF03471 Transporter associated domain 493 571 1.8E-15 T 13-10-2018 IPR005170 Transporter-associated domain Y11_04921 6cecefac1b034545bf09c6dc2fc10bb2 575 SUPERFAMILY SSF116726 419 483 3.01E-10 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_04921 6cecefac1b034545bf09c6dc2fc10bb2 575 SUPERFAMILY SSF56176 497 570 2.34E-13 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Y11_04921 6cecefac1b034545bf09c6dc2fc10bb2 575 Gene3D G3DSA:3.30.465.10 488 570 1.4E-11 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Y11_09601 478d3629bb49ae2c48f7723f6ad9410d 326 Pfam PF05707 Zonular occludens toxin (Zot) 4 196 1.5E-26 T 13-10-2018 IPR008900 Zona occludens toxin Y11_09601 478d3629bb49ae2c48f7723f6ad9410d 326 Gene3D G3DSA:3.40.50.300 1 198 4.2E-41 T 13-10-2018 Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 SUPERFAMILY SSF50249 222 642 1.77E-140 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 SUPERFAMILY SSF50249 67 145 1.03E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 Pfam PF08206 Ribonuclease B OB domain 158 213 6.6E-5 T 13-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 Pfam PF08206 Ribonuclease B OB domain 87 144 3.2E-22 T 13-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 Hamap MF_01895 Ribonuclease R [rnr]. 38 726 57.439 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 SMART SM00955 260 588 8.5E-181 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 SMART SM00316 643 726 3.3E-13 T 13-10-2018 IPR022967 RNA-binding domain, S1 Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 726 2.7E-272 T 13-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 Pfam PF08461 Ribonuclease R winged-helix domain 23 85 1.1E-16 T 13-10-2018 IPR013668 Ribonuclease R winged-helix domain Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 SUPERFAMILY SSF50249 138 236 6.09E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 Gene3D G3DSA:2.40.50.140 646 753 1.2E-23 T 13-10-2018 Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 SUPERFAMILY SSF50249 643 733 3.61E-21 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 726 3.4E-276 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 SMART SM00357 86 145 4.5E-17 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 SMART SM00357 150 214 3.2 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 Pfam PF00575 S1 RNA binding domain 642 724 1.0E-16 T 13-10-2018 IPR003029 S1 domain GO:0003676 Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 Pfam PF00773 RNB domain 260 587 5.9E-106 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 Gene3D G3DSA:2.40.50.140 73 147 2.4E-16 T 13-10-2018 Y11_36191 3884c510734c0599e26e90ebb90fddfb 848 Gene3D G3DSA:2.40.50.140 148 214 2.4E-5 T 13-10-2018 Y11_27401 1322038dd8182a14751c902c59e33f9f 253 SUPERFAMILY SSF52540 13 247 9.78E-82 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_27401 1322038dd8182a14751c902c59e33f9f 253 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_27401 1322038dd8182a14751c902c59e33f9f 253 SMART SM00382 38 225 3.3E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_27401 1322038dd8182a14751c902c59e33f9f 253 Pfam PF00005 ABC transporter 29 177 7.6E-38 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_27401 1322038dd8182a14751c902c59e33f9f 253 Gene3D G3DSA:3.40.50.300 11 253 1.6E-79 T 13-10-2018 Y11_27401 1322038dd8182a14751c902c59e33f9f 253 PIRSF PIRSF039085 10 253 2.2E-108 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Y11_04081 639cd8c98a46c825bcb3796682c3b296 760 Pfam PF01228 Glycine radical 630 741 3.5E-43 T 13-10-2018 IPR001150 Glycine radical domain GO:0003824 Y11_04081 639cd8c98a46c825bcb3796682c3b296 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 759 0.0 T 13-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Y11_04081 639cd8c98a46c825bcb3796682c3b296 760 Pfam PF02901 Pyruvate formate lyase-like 23 614 1.1E-204 T 13-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 Y11_04081 639cd8c98a46c825bcb3796682c3b296 760 PIRSF PIRSF000379 8 760 0.0 T 13-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Y11_04081 639cd8c98a46c825bcb3796682c3b296 760 Gene3D G3DSA:3.20.70.20 2 760 0.0 T 13-10-2018 Y11_04081 639cd8c98a46c825bcb3796682c3b296 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 13-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Y11_04081 639cd8c98a46c825bcb3796682c3b296 760 SUPERFAMILY SSF51998 4 758 1.1E-288 T 13-10-2018 Y11_21041 87e707baf0e0f6a4a30bc0546ae5b437 412 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 282 378 1.5E-24 T 13-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain Y11_21041 87e707baf0e0f6a4a30bc0546ae5b437 412 Gene3D G3DSA:3.30.160.720 283 345 1.8E-26 T 13-10-2018 Y11_21041 87e707baf0e0f6a4a30bc0546ae5b437 412 SUPERFAMILY SSF56300 1 339 1.88E-58 T 13-10-2018 Y11_21041 87e707baf0e0f6a4a30bc0546ae5b437 412 Pfam PF00149 Calcineurin-like phosphoesterase 1 101 1.0E-13 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Y11_21041 87e707baf0e0f6a4a30bc0546ae5b437 412 Gene3D G3DSA:3.60.21.10 1 281 2.0E-88 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Y11_21041 87e707baf0e0f6a4a30bc0546ae5b437 412 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 259 8.7E-77 T 13-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 Y11_p0721 200f7d5ea475b4108c14c120ab15b4fd 261 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 7 255 5.2E-76 T 13-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 Y11_p0721 200f7d5ea475b4108c14c120ab15b4fd 261 Pfam PF01311 Bacterial export proteins, family 1 11 245 7.1E-51 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Y11_p0721 200f7d5ea475b4108c14c120ab15b4fd 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 1.0E-30 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Y11_p0721 200f7d5ea475b4108c14c120ab15b4fd 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 1.0E-30 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Y11_p0721 200f7d5ea475b4108c14c120ab15b4fd 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 1.0E-30 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Y11_p0721 200f7d5ea475b4108c14c120ab15b4fd 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 79 98 1.0E-30 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Y11_39511 26bcd4a8d3c0c42798406452a0ad62d7 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 1.9E-60 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Y11_39511 26bcd4a8d3c0c42798406452a0ad62d7 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 70.163 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Y11_39511 26bcd4a8d3c0c42798406452a0ad62d7 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 7.0E-65 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Y11_39511 26bcd4a8d3c0c42798406452a0ad62d7 126 Pfam PF02261 Aspartate decarboxylase 1 114 9.6E-48 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Y11_39511 26bcd4a8d3c0c42798406452a0ad62d7 126 SUPERFAMILY SSF50692 1 115 1.16E-46 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Y11_39511 26bcd4a8d3c0c42798406452a0ad62d7 126 PIRSF PIRSF006246 1 125 8.0E-53 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Y11_39511 26bcd4a8d3c0c42798406452a0ad62d7 126 Gene3D G3DSA:2.40.40.20 1 126 5.0E-54 T 13-10-2018 Y11_29391 05715e113b64dab3414bc021bfd54f0d 188 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 182 17.15 T 13-10-2018 IPR007336 Der GTPase activator GO:0005096 Y11_29391 05715e113b64dab3414bc021bfd54f0d 188 Pfam PF04220 Der GTPase activator (YihI) 20 178 8.8E-57 T 13-10-2018 IPR007336 Der GTPase activator GO:0005096 Y11_12361 b6578a69f6a8f8b39f1563fd0151e757 278 Gene3D G3DSA:3.40.50.80 139 277 4.5E-37 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Y11_12361 b6578a69f6a8f8b39f1563fd0151e757 278 Gene3D G3DSA:2.40.30.10 2 136 3.1E-32 T 13-10-2018 Y11_12361 b6578a69f6a8f8b39f1563fd0151e757 278 Pfam PF08021 Siderophore-interacting FAD-binding domain 21 136 2.1E-35 T 13-10-2018 IPR013113 FAD-binding 9, siderophore-interacting Y11_12361 b6578a69f6a8f8b39f1563fd0151e757 278 Pfam PF04954 Siderophore-interacting protein 145 259 4.4E-34 T 13-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain Y11_12361 b6578a69f6a8f8b39f1563fd0151e757 278 SUPERFAMILY SSF63380 7 141 4.68E-13 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Y11_24901 f29f73a872e57ba22650c93c9950eac9 493 Gene3D G3DSA:1.20.1600.10 23 447 3.3E-149 T 13-10-2018 Y11_24901 f29f73a872e57ba22650c93c9950eac9 493 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 439 7.0E-134 T 13-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 Y11_24901 f29f73a872e57ba22650c93c9950eac9 493 SUPERFAMILY SSF56954 25 442 1.44E-95 T 13-10-2018 Y11_24901 f29f73a872e57ba22650c93c9950eac9 493 Pfam PF02321 Outer membrane efflux protein 25 210 8.8E-29 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Y11_24901 f29f73a872e57ba22650c93c9950eac9 493 Pfam PF02321 Outer membrane efflux protein 234 424 2.0E-35 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Y11_17311 492a916e4be2e1ce9e3e2958fe47805f 179 SUPERFAMILY SSF48452 2 175 1.06E-63 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_17311 492a916e4be2e1ce9e3e2958fe47805f 179 Gene3D G3DSA:1.25.40.10 79 179 1.4E-29 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_17311 492a916e4be2e1ce9e3e2958fe47805f 179 Gene3D G3DSA:1.20.58.320 1 78 5.1E-26 T 13-10-2018 Y11_17311 492a916e4be2e1ce9e3e2958fe47805f 179 Pfam PF06041 Bacterial protein of unknown function (DUF924) 6 176 1.4E-58 T 13-10-2018 IPR010323 Protein of unknown function DUF924 Y11_14061 20d69eacec392162b0309eb56b1f0b13 369 Gene3D G3DSA:1.20.58.1830 4 32 1.1E-72 T 13-10-2018 Y11_14061 20d69eacec392162b0309eb56b1f0b13 369 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 139 4.7E-42 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Y11_14061 20d69eacec392162b0309eb56b1f0b13 369 Gene3D G3DSA:2.30.220.10 194 269 1.1E-72 T 13-10-2018 Y11_14061 20d69eacec392162b0309eb56b1f0b13 369 Gene3D G3DSA:1.10.8.410 317 369 3.2E-23 T 13-10-2018 Y11_14061 20d69eacec392162b0309eb56b1f0b13 369 Gene3D G3DSA:2.170.280.10 180 193 1.1E-72 T 13-10-2018 Y11_14061 20d69eacec392162b0309eb56b1f0b13 369 PRINTS PR00207 Flagellin signature 75 94 4.9E-30 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Y11_14061 20d69eacec392162b0309eb56b1f0b13 369 PRINTS PR00207 Flagellin signature 110 133 4.9E-30 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Y11_14061 20d69eacec392162b0309eb56b1f0b13 369 PRINTS PR00207 Flagellin signature 36 53 4.9E-30 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Y11_14061 20d69eacec392162b0309eb56b1f0b13 369 Pfam PF00700 Bacterial flagellin C-terminal helical region 284 368 2.9E-30 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Y11_14061 20d69eacec392162b0309eb56b1f0b13 369 Gene3D G3DSA:1.20.1330.10 44 179 1.1E-72 T 13-10-2018 Y11_14061 20d69eacec392162b0309eb56b1f0b13 369 SUPERFAMILY SSF64518 1 369 9.02E-97 T 13-10-2018 Y11_22111 8ad39ffcd4bfc9c15157b348a93d0e0b 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 6.2E-62 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Y11_22111 8ad39ffcd4bfc9c15157b348a93d0e0b 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 7.0E-81 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Y11_22111 8ad39ffcd4bfc9c15157b348a93d0e0b 171 Gene3D G3DSA:3.30.1360.80 1 171 6.9E-73 T 13-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Y11_22111 8ad39ffcd4bfc9c15157b348a93d0e0b 171 SUPERFAMILY SSF63411 4 162 1.56E-67 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Y11_22111 8ad39ffcd4bfc9c15157b348a93d0e0b 171 PIRSF PIRSF006160 1 162 2.8E-66 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Y11_22111 8ad39ffcd4bfc9c15157b348a93d0e0b 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 3.1E-50 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Y11_22111 8ad39ffcd4bfc9c15157b348a93d0e0b 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 3.1E-50 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Y11_22111 8ad39ffcd4bfc9c15157b348a93d0e0b 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 3.1E-50 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Y11_22111 8ad39ffcd4bfc9c15157b348a93d0e0b 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 3.1E-50 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Y11_22111 8ad39ffcd4bfc9c15157b348a93d0e0b 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 3.1E-50 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Y11_22111 8ad39ffcd4bfc9c15157b348a93d0e0b 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.733 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Y11_11541 54ee5d8f1ac0059b5fd17e00654114b2 148 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 41.115 T 13-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 Y11_11541 54ee5d8f1ac0059b5fd17e00654114b2 148 PIRSF PIRSF006173 1 145 4.1E-65 T 13-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 Y11_11541 54ee5d8f1ac0059b5fd17e00654114b2 148 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 2.4E-7 T 13-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Y11_12661 18a205cc5cff18c9f398ef338d399805 294 Gene3D G3DSA:3.40.190.10 163 259 1.1E-58 T 13-10-2018 Y11_12661 18a205cc5cff18c9f398ef338d399805 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.7E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_12661 18a205cc5cff18c9f398ef338d399805 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.8E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_12661 18a205cc5cff18c9f398ef338d399805 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.8E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_12661 18a205cc5cff18c9f398ef338d399805 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.8E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_12661 18a205cc5cff18c9f398ef338d399805 294 Pfam PF03466 LysR substrate binding domain 93 288 7.7E-34 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_12661 18a205cc5cff18c9f398ef338d399805 294 SUPERFAMILY SSF46785 2 87 1.79E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_12661 18a205cc5cff18c9f398ef338d399805 294 Gene3D G3DSA:1.10.10.10 6 93 2.4E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_12661 18a205cc5cff18c9f398ef338d399805 294 Gene3D G3DSA:3.40.190.10 103 285 1.1E-58 T 13-10-2018 Y11_12661 18a205cc5cff18c9f398ef338d399805 294 SUPERFAMILY SSF53850 83 289 1.63E-31 T 13-10-2018 Y11_19581 a0909ec6b99ddb1eff3c675729ed328a 764 SMART SM00778 29 67 7.7E-19 T 13-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 Y11_19581 a0909ec6b99ddb1eff3c675729ed328a 764 SMART SM00885 318 444 2.5E-17 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal Y11_19581 a0909ec6b99ddb1eff3c675729ed328a 764 Pfam PF03288 Poxvirus D5 protein-like 651 748 3.3E-20 T 13-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal Y11_19581 a0909ec6b99ddb1eff3c675729ed328a 764 SUPERFAMILY SSF52540 416 609 2.15E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_19581 a0909ec6b99ddb1eff3c675729ed328a 764 Gene3D G3DSA:3.40.50.300 444 615 5.5E-8 T 13-10-2018 Y11_19581 a0909ec6b99ddb1eff3c675729ed328a 764 Pfam PF13362 Toprim domain 181 279 3.1E-10 T 13-10-2018 IPR006171 TOPRIM domain Y11_19581 a0909ec6b99ddb1eff3c675729ed328a 764 Pfam PF08706 D5 N terminal like 321 447 5.8E-6 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal Y11_19581 a0909ec6b99ddb1eff3c675729ed328a 764 Gene3D G3DSA:1.10.10.10 652 750 2.1E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_19581 a0909ec6b99ddb1eff3c675729ed328a 764 SUPERFAMILY SSF46785 652 750 4.62E-37 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_19581 a0909ec6b99ddb1eff3c675729ed328a 764 SUPERFAMILY SSF57783 28 93 4.25E-10 T 13-10-2018 Y11_19581 a0909ec6b99ddb1eff3c675729ed328a 764 Pfam PF08273 Zinc-binding domain of primase-helicase 30 67 2.3E-17 T 13-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 Y11_12861 a4401ee5d362db80520c85face3dcf2f 96 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 12 90 2.4E-24 T 13-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system Y11_17001 6cd3aaba75facc4057831f07c792cf5d 215 Pfam PF12798 4Fe-4S binding domain 149 169 0.014 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_17001 6cd3aaba75facc4057831f07c792cf5d 215 Gene3D G3DSA:3.30.70.20 5 77 9.9E-8 T 13-10-2018 Y11_17001 6cd3aaba75facc4057831f07c792cf5d 215 SUPERFAMILY SSF54862 3 182 4.88E-39 T 13-10-2018 Y11_17001 6cd3aaba75facc4057831f07c792cf5d 215 Pfam PF00037 4Fe-4S binding domain 78 100 5.2E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_17001 6cd3aaba75facc4057831f07c792cf5d 215 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 84 95 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_17001 6cd3aaba75facc4057831f07c792cf5d 215 Gene3D G3DSA:3.30.70.20 78 210 1.8E-14 T 13-10-2018 Y11_11791 143e66e008bdaaa8229dbd1392423732 252 SMART SM00382 29 199 1.0E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_11791 143e66e008bdaaa8229dbd1392423732 252 Pfam PF00005 ABC transporter 20 149 1.5E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_11791 143e66e008bdaaa8229dbd1392423732 252 Gene3D G3DSA:3.40.50.300 1 241 6.5E-60 T 13-10-2018 Y11_11791 143e66e008bdaaa8229dbd1392423732 252 SUPERFAMILY SSF52540 3 224 1.31E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_02991 24bb60fd6088d79d5d452f686905de4f 585 Pfam PF04851 Type III restriction enzyme, res subunit 3 155 4.3E-25 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Y11_02991 24bb60fd6088d79d5d452f686905de4f 585 Gene3D G3DSA:3.40.50.300 1 168 9.0E-30 T 13-10-2018 Y11_02991 24bb60fd6088d79d5d452f686905de4f 585 SUPERFAMILY SSF57829 421 467 2.01E-7 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Y11_02991 24bb60fd6088d79d5d452f686905de4f 585 SMART SM00490 263 345 1.3E-8 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_02991 24bb60fd6088d79d5d452f686905de4f 585 SUPERFAMILY SSF52540 50 358 1.21E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_02991 24bb60fd6088d79d5d452f686905de4f 585 Gene3D G3DSA:3.40.50.300 186 378 4.2E-33 T 13-10-2018 Y11_02991 24bb60fd6088d79d5d452f686905de4f 585 Pfam PF00271 Helicase conserved C-terminal domain 244 343 5.2E-11 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_02991 24bb60fd6088d79d5d452f686905de4f 585 SMART SM00487 1 185 6.1E-18 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 Pfam PF00072 Response regulator receiver domain 6 115 2.2E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 Gene3D G3DSA:3.40.50.2300 1 124 7.5E-46 T 13-10-2018 Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 SMART SM00382 161 312 4.3E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 SUPERFAMILY SSF46689 381 470 9.68E-25 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 Gene3D G3DSA:3.40.50.300 129 311 4.1E-66 T 13-10-2018 Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 Pfam PF00158 Sigma-54 interaction domain 141 307 4.8E-70 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 SUPERFAMILY SSF52172 6 186 4.84E-47 T 13-10-2018 IPR011006 CheY-like superfamily Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 Pfam PF02954 Bacterial regulatory protein, Fis family 428 467 1.7E-15 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 SMART SM00448 4 115 3.1E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 Gene3D G3DSA:1.10.8.60 312 378 2.6E-19 T 13-10-2018 Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 SUPERFAMILY SSF52540 140 384 1.23E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 467 1.1E-245 T 13-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 8.0E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 470 8.0E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Y11_29371 63fa64145b5a0d9be3bf62a041017c5b 470 Gene3D G3DSA:1.10.10.60 380 470 2.2E-28 T 13-10-2018 Y11_26511 af8eb0e79084f47fc116b0531bc285ce 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 4.1E-29 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Y11_26511 af8eb0e79084f47fc116b0531bc285ce 95 Gene3D G3DSA:3.30.160.100 1 95 1.7E-39 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like Y11_26511 af8eb0e79084f47fc116b0531bc285ce 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 6.4E-36 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Y11_26511 af8eb0e79084f47fc116b0531bc285ce 95 SUPERFAMILY SSF69754 1 95 4.32E-36 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 3.5E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 SMART SM00091 98 164 9.9E-8 T 13-10-2018 IPR000014 PAS domain Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 1.4E-28 T 13-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 Pfam PF00989 PAS fold 99 194 2.2E-9 T 13-10-2018 IPR013767 PAS fold GO:0006355 Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 420 3.6E-135 T 13-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 98 211 8.5E-9 T 13-10-2018 IPR000014 PAS domain Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 SMART SM00388 203 269 9.6E-22 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 Gene3D G3DSA:3.30.565.10 273 425 4.8E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 SMART SM00387 313 425 1.8E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 SUPERFAMILY SSF55785 87 195 1.4E-12 T 13-10-2018 IPR035965 PAS domain superfamily Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 Gene3D G3DSA:3.30.450.20 86 199 3.8E-9 T 13-10-2018 Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 Gene3D G3DSA:1.10.287.130 200 269 6.7E-23 T 13-10-2018 Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 SUPERFAMILY SSF47384 190 268 3.73E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 SUPERFAMILY SSF55874 259 423 9.95E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 423 2.2E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 8.1E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 8.1E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 8.1E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_21021 c6769460b3e1ce55d81b1421b68cf3b0 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 8.1E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_19001 bcdbb565ca7d8d6be535d373dff64694 381 SUPERFAMILY SSF51556 54 350 2.77E-101 T 13-10-2018 IPR032466 Metal-dependent hydrolase Y11_19001 bcdbb565ca7d8d6be535d373dff64694 381 PIRSF PIRSF038994 1 381 2.5E-116 T 13-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 Y11_19001 bcdbb565ca7d8d6be535d373dff64694 381 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 9.0E-163 T 13-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 Y11_19001 bcdbb565ca7d8d6be535d373dff64694 381 SUPERFAMILY SSF51338 1 53 1.35E-19 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_19001 bcdbb565ca7d8d6be535d373dff64694 381 Gene3D G3DSA:2.30.40.10 7 376 1.2E-137 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_19001 bcdbb565ca7d8d6be535d373dff64694 381 Pfam PF01979 Amidohydrolase family 50 379 3.0E-41 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Y11_19001 bcdbb565ca7d8d6be535d373dff64694 381 Gene3D G3DSA:3.20.20.140 55 344 1.2E-137 T 13-10-2018 Y11_29891 c8959d48462416c3bc758c60e73a7401 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 56 183 1.5E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_29891 c8959d48462416c3bc758c60e73a7401 222 Gene3D G3DSA:3.40.50.1000 7 195 3.8E-46 T 13-10-2018 IPR023214 HAD superfamily Y11_29891 c8959d48462416c3bc758c60e73a7401 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 3.7E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_29891 c8959d48462416c3bc758c60e73a7401 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 3.7E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_29891 c8959d48462416c3bc758c60e73a7401 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 3.7E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_29891 c8959d48462416c3bc758c60e73a7401 222 Gene3D G3DSA:1.10.150.240 19 86 3.8E-46 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Y11_29891 c8959d48462416c3bc758c60e73a7401 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 182 2.2E-26 T 13-10-2018 Y11_29891 c8959d48462416c3bc758c60e73a7401 222 SUPERFAMILY SSF56784 4 212 1.6E-46 T 13-10-2018 IPR036412 HAD-like superfamily Y11_15641 1524d5c7d04d057d34a0cccf84e8acc3 1277 Pfam PF06761 Intracellular multiplication and human macrophage-killing 585 897 2.4E-66 T 13-10-2018 IPR009612 ImcF-related Y11_15641 1524d5c7d04d057d34a0cccf84e8acc3 1277 Pfam PF14331 ImcF-related N-terminal domain 253 534 4.3E-72 T 13-10-2018 IPR025743 ImcF-related, N-terminal domain Y11_15641 1524d5c7d04d057d34a0cccf84e8acc3 1277 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 72 1267 1.1E-240 T 13-10-2018 IPR017731 Type VI secretion system, IcmF Y11_15641 1524d5c7d04d057d34a0cccf84e8acc3 1277 SUPERFAMILY SSF52540 181 384 1.67E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_15641 1524d5c7d04d057d34a0cccf84e8acc3 1277 Pfam PF06744 Type VI secretion protein IcmF C-terminal 1024 1215 1.1E-43 T 13-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal Y11_07991 af3ce3cdcd62cc18c2603cb9b5c45bb3 327 Gene3D G3DSA:3.90.550.10 2 226 1.2E-39 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_07991 af3ce3cdcd62cc18c2603cb9b5c45bb3 327 SUPERFAMILY SSF53448 8 230 2.73E-38 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_07991 af3ce3cdcd62cc18c2603cb9b5c45bb3 327 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 326 61.78 T 13-10-2018 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 Y11_07991 af3ce3cdcd62cc18c2603cb9b5c45bb3 327 Pfam PF00535 Glycosyl transferase family 2 11 172 9.0E-32 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Y11_28971 183ada4498d340bd390c602cce3ab8ad 78 Pfam PF00830 Ribosomal L28 family 3 62 1.8E-25 T 13-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_28971 183ada4498d340bd390c602cce3ab8ad 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.265 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_28971 183ada4498d340bd390c602cce3ab8ad 78 Gene3D G3DSA:2.30.170.40 2 78 6.4E-33 T 13-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_28971 183ada4498d340bd390c602cce3ab8ad 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 9.0E-29 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_28971 183ada4498d340bd390c602cce3ab8ad 78 SUPERFAMILY SSF143800 1 77 6.47E-30 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_26911 52a7a181bc7b515c439b5ceec7b106d0 311 Gene3D G3DSA:2.40.50.100 47 114 6.8E-10 T 13-10-2018 Y11_26911 52a7a181bc7b515c439b5ceec7b106d0 311 Gene3D G3DSA:2.40.30.170 171 294 5.4E-21 T 13-10-2018 Y11_26911 52a7a181bc7b515c439b5ceec7b106d0 311 SUPERFAMILY SSF111369 46 207 7.98E-20 T 13-10-2018 Y11_26911 52a7a181bc7b515c439b5ceec7b106d0 311 Pfam PF13437 HlyD family secretion protein 156 239 2.8E-9 T 13-10-2018 Y11_26911 52a7a181bc7b515c439b5ceec7b106d0 311 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 311 55.906 T 13-10-2018 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA Y11_26911 52a7a181bc7b515c439b5ceec7b106d0 311 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 243 1.4E-28 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Y11_26911 52a7a181bc7b515c439b5ceec7b106d0 311 Pfam PF13533 Biotin-lipoyl like 47 94 5.4E-17 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 34 608 2.1E-244 T 13-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 30 609 0.0 T 13-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 SUPERFAMILY SSF56425 254 385 3.29E-43 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 PIRSF PIRSF000171 24 588 5.5E-42 T 13-10-2018 Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 SUPERFAMILY SSF51905 22 447 1.58E-72 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 35 54 7.1E-10 T 13-10-2018 Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 387 409 7.1E-10 T 13-10-2018 Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 Pfam PF00890 FAD binding domain 34 424 3.7E-114 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 Gene3D G3DSA:4.10.80.40 570 604 6.0E-19 T 13-10-2018 Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 Pfam PF02910 Fumarate reductase flavoprotein C-term 480 608 1.7E-37 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 Gene3D G3DSA:1.20.58.100 451 565 1.0E-34 T 13-10-2018 Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 70 79 - T 13-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 Gene3D G3DSA:3.50.50.60 34 436 7.8E-164 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 SUPERFAMILY SSF46977 471 610 2.22E-44 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 Gene3D G3DSA:3.90.700.10 264 390 7.8E-164 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 34 56 2.3E-5 T 13-10-2018 Y11_35991 bec4f2cdc8b6c81cd0fd8a2525f30db8 634 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 409 2.3E-5 T 13-10-2018 Y11_15451 2300d8e6c9e248a75057158101ce6305 363 SMART SM00382 44 227 2.6E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_15451 2300d8e6c9e248a75057158101ce6305 363 Gene3D G3DSA:3.40.50.300 19 237 3.1E-70 T 13-10-2018 Y11_15451 2300d8e6c9e248a75057158101ce6305 363 Gene3D G3DSA:2.40.50.940 238 353 3.9E-12 T 13-10-2018 Y11_15451 2300d8e6c9e248a75057158101ce6305 363 SUPERFAMILY SSF52540 20 259 6.93E-87 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_15451 2300d8e6c9e248a75057158101ce6305 363 Gene3D G3DSA:2.40.50.140 294 350 3.9E-12 T 13-10-2018 Y11_15451 2300d8e6c9e248a75057158101ce6305 363 SUPERFAMILY SSF50331 253 358 2.09E-14 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Y11_15451 2300d8e6c9e248a75057158101ce6305 363 Pfam PF08402 TOBE domain 287 358 4.7E-10 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Y11_15451 2300d8e6c9e248a75057158101ce6305 363 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_15451 2300d8e6c9e248a75057158101ce6305 363 Pfam PF00005 ABC transporter 36 177 1.1E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_28951 ee0f417931169251cbb23683f24aaf8f 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 13-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 Y11_28951 ee0f417931169251cbb23683f24aaf8f 269 SMART SM00898 2 115 7.9E-56 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Y11_28951 ee0f417931169251cbb23683f24aaf8f 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.4E-31 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Y11_28951 ee0f417931169251cbb23683f24aaf8f 269 SUPERFAMILY SSF81624 2 138 3.01E-44 T 13-10-2018 IPR035937 MutM-like, N-terminal Y11_28951 ee0f417931169251cbb23683f24aaf8f 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.726 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Y11_28951 ee0f417931169251cbb23683f24aaf8f 269 SUPERFAMILY SSF46946 130 222 3.14E-30 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Y11_28951 ee0f417931169251cbb23683f24aaf8f 269 SMART SM01232 129 221 1.7E-48 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Y11_28951 ee0f417931169251cbb23683f24aaf8f 269 SUPERFAMILY SSF57716 217 268 1.74E-16 T 13-10-2018 Y11_28951 ee0f417931169251cbb23683f24aaf8f 269 Gene3D G3DSA:3.20.190.10 2 128 4.9E-44 T 13-10-2018 IPR035937 MutM-like, N-terminal Y11_28951 ee0f417931169251cbb23683f24aaf8f 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 4.8E-103 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Y11_28951 ee0f417931169251cbb23683f24aaf8f 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 9.3E-10 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Y11_28951 ee0f417931169251cbb23683f24aaf8f 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.5E-26 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Y11_28951 ee0f417931169251cbb23683f24aaf8f 269 Gene3D G3DSA:1.10.8.50 139 269 9.2E-47 T 13-10-2018 Y11_34141 2011b4a979a98a918650ad4bc616c9f4 421 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 71 82 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_34141 2011b4a979a98a918650ad4bc616c9f4 421 Pfam PF02754 Cysteine-rich domain 314 397 1.3E-13 T 13-10-2018 IPR004017 Cysteine-rich domain Y11_34141 2011b4a979a98a918650ad4bc616c9f4 421 Pfam PF02754 Cysteine-rich domain 178 264 2.1E-13 T 13-10-2018 IPR004017 Cysteine-rich domain Y11_34141 2011b4a979a98a918650ad4bc616c9f4 421 Gene3D G3DSA:1.10.1060.10 2 106 5.2E-10 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Y11_34141 2011b4a979a98a918650ad4bc616c9f4 421 SUPERFAMILY SSF46548 20 96 5.23E-16 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Y11_34141 2011b4a979a98a918650ad4bc616c9f4 421 Pfam PF13183 4Fe-4S dicluster domain 21 85 9.0E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_34141 2011b4a979a98a918650ad4bc616c9f4 421 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 18 417 4.3E-231 T 13-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 Y11_35711 44c8d129fc066d3e2b78666cdf5e782c 687 SUPERFAMILY SSF56935 44 687 3.05E-98 T 13-10-2018 Y11_35711 44c8d129fc066d3e2b78666cdf5e782c 687 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 44 687 7.2E-186 T 13-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 Y11_35711 44c8d129fc066d3e2b78666cdf5e782c 687 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 13-10-2018 IPR010916 TonB box, conserved site Y11_35711 44c8d129fc066d3e2b78666cdf5e782c 687 Pfam PF00593 TonB dependent receptor 287 685 9.3E-46 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Y11_35711 44c8d129fc066d3e2b78666cdf5e782c 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 161 6.3E-24 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Y11_35711 44c8d129fc066d3e2b78666cdf5e782c 687 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 44 687 1.1E-148 T 13-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 Y11_35711 44c8d129fc066d3e2b78666cdf5e782c 687 Gene3D G3DSA:2.40.170.20 167 687 8.4E-127 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Y11_35711 44c8d129fc066d3e2b78666cdf5e782c 687 Gene3D G3DSA:2.170.130.10 43 166 3.2E-42 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Y11_34961 9206ce8135e94c5f57c89180d6dee057 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_34961 9206ce8135e94c5f57c89180d6dee057 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 1.1E-25 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_09941 9206ce8135e94c5f57c89180d6dee057 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_09941 9206ce8135e94c5f57c89180d6dee057 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 1.1E-25 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_22491 9206ce8135e94c5f57c89180d6dee057 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_22491 9206ce8135e94c5f57c89180d6dee057 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 1.1E-25 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_21831 9206ce8135e94c5f57c89180d6dee057 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_21831 9206ce8135e94c5f57c89180d6dee057 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 1.1E-25 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_40781 9206ce8135e94c5f57c89180d6dee057 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_40781 9206ce8135e94c5f57c89180d6dee057 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 1.1E-25 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_19931 353da4249e280d960401886e930cbe6e 478 Gene3D G3DSA:3.40.50.720 116 446 3.0E-114 T 13-10-2018 Y11_19931 353da4249e280d960401886e930cbe6e 478 Pfam PF02719 Polysaccharide biosynthesis protein 121 414 2.3E-129 T 13-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Y11_19931 353da4249e280d960401886e930cbe6e 478 Gene3D G3DSA:3.40.50.720 1 102 5.4E-24 T 13-10-2018 Y11_19931 353da4249e280d960401886e930cbe6e 478 SUPERFAMILY SSF51735 119 428 1.41E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_19931 353da4249e280d960401886e930cbe6e 478 SUPERFAMILY SSF53335 6 166 6.48E-9 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_25751 0a2e1c35166cff813bae0057ebad5f43 424 SMART SM00869 127 413 1.6E-29 T 13-10-2018 IPR005546 Autotransporter beta-domain Y11_25751 0a2e1c35166cff813bae0057ebad5f43 424 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 57 424 2.2E-58 T 13-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 Y11_25751 0a2e1c35166cff813bae0057ebad5f43 424 Pfam PF03797 Autotransporter beta-domain 130 401 4.9E-34 T 13-10-2018 IPR005546 Autotransporter beta-domain Y11_25751 0a2e1c35166cff813bae0057ebad5f43 424 SUPERFAMILY SSF103515 96 424 5.49E-37 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Y11_25751 0a2e1c35166cff813bae0057ebad5f43 424 Gene3D G3DSA:2.40.128.130 85 424 1.4E-75 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Y11_15931 c97b0150a70da57d0eca7faeb29a492c 181 Gene3D G3DSA:3.40.50.300 1 181 3.5E-65 T 13-10-2018 Y11_15931 c97b0150a70da57d0eca7faeb29a492c 181 PIRSF PIRSF006135 1 181 1.2E-55 T 13-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Y11_15931 c97b0150a70da57d0eca7faeb29a492c 181 SUPERFAMILY SSF52540 1 181 1.33E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_15931 c97b0150a70da57d0eca7faeb29a492c 181 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 2 180 2.0E-60 T 13-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Y11_34841 4c74cbbd6acc967a649e877dbf89a557 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 189.297 T 13-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Y11_34841 4c74cbbd6acc967a649e877dbf89a557 316 Gene3D G3DSA:3.40.50.300 9 316 1.3E-94 T 13-10-2018 Y11_34841 4c74cbbd6acc967a649e877dbf89a557 316 PIRSF PIRSF000545 1 316 2.6E-148 T 13-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Y11_34841 4c74cbbd6acc967a649e877dbf89a557 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 244 3.0E-15 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Y11_34841 4c74cbbd6acc967a649e877dbf89a557 316 SUPERFAMILY SSF52540 10 315 1.41E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_34841 4c74cbbd6acc967a649e877dbf89a557 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 2.6E-169 T 13-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Y11_01861 11ca812c36d96a73969713e11dbd3d7e 190 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 36.702 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Y11_01861 11ca812c36d96a73969713e11dbd3d7e 190 Pfam PF02441 Flavoprotein 2 165 6.7E-25 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Y11_01861 11ca812c36d96a73969713e11dbd3d7e 190 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 3.0E-70 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Y11_01861 11ca812c36d96a73969713e11dbd3d7e 190 Gene3D G3DSA:3.40.50.1950 2 190 4.4E-77 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Y11_01861 11ca812c36d96a73969713e11dbd3d7e 190 SUPERFAMILY SSF52507 2 187 2.09E-58 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Y11_17291 f1efb40213a58975b5abfc93c8015adf 219 Pfam PF00005 ABC transporter 22 169 3.1E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_17291 f1efb40213a58975b5abfc93c8015adf 219 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_17291 f1efb40213a58975b5abfc93c8015adf 219 SUPERFAMILY SSF52540 1 218 1.25E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_17291 f1efb40213a58975b5abfc93c8015adf 219 SMART SM00382 30 217 9.4E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_17291 f1efb40213a58975b5abfc93c8015adf 219 Gene3D G3DSA:3.40.50.300 1 219 3.4E-61 T 13-10-2018 Y11_03891 fb0831a250e1e2a3763f350c67d0bfdb 370 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 363 2.2E-60 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Y11_03891 fb0831a250e1e2a3763f350c67d0bfdb 370 Gene3D G3DSA:1.10.287.470 94 185 7.5E-89 T 13-10-2018 Y11_03891 fb0831a250e1e2a3763f350c67d0bfdb 370 Gene3D G3DSA:2.40.420.20 45 362 7.5E-89 T 13-10-2018 Y11_03891 fb0831a250e1e2a3763f350c67d0bfdb 370 Gene3D G3DSA:2.40.50.100 60 222 7.5E-89 T 13-10-2018 Y11_03891 fb0831a250e1e2a3763f350c67d0bfdb 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 294 1.9E-21 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Y11_03891 fb0831a250e1e2a3763f350c67d0bfdb 370 SUPERFAMILY SSF111369 52 298 3.66E-29 T 13-10-2018 Y11_03891 fb0831a250e1e2a3763f350c67d0bfdb 370 Gene3D G3DSA:2.40.30.170 49 301 7.5E-89 T 13-10-2018 Y11_19781 c98976f306395d5a16acfc0d39b5c01f 304 SMART SM00244 18 176 2.8E-59 T 13-10-2018 IPR001107 Band 7 domain Y11_19781 c98976f306395d5a16acfc0d39b5c01f 304 SUPERFAMILY SSF117892 49 183 6.93E-41 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily Y11_19781 c98976f306395d5a16acfc0d39b5c01f 304 Gene3D G3DSA:3.30.479.30 46 178 2.8E-42 T 13-10-2018 Y11_19781 c98976f306395d5a16acfc0d39b5c01f 304 Pfam PF01145 SPFH domain / Band 7 family 22 200 8.0E-31 T 13-10-2018 IPR001107 Band 7 domain Y11_19781 c98976f306395d5a16acfc0d39b5c01f 304 PRINTS PR00721 Stomatin signature 128 151 2.0E-27 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Y11_19781 c98976f306395d5a16acfc0d39b5c01f 304 PRINTS PR00721 Stomatin signature 171 192 2.0E-27 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Y11_19781 c98976f306395d5a16acfc0d39b5c01f 304 PRINTS PR00721 Stomatin signature 108 125 2.0E-27 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Y11_19781 c98976f306395d5a16acfc0d39b5c01f 304 PRINTS PR00721 Stomatin signature 152 170 2.0E-27 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Y11_19781 c98976f306395d5a16acfc0d39b5c01f 304 PRINTS PR00721 Stomatin signature 73 94 2.0E-27 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Y11_19781 c98976f306395d5a16acfc0d39b5c01f 304 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 13-10-2018 IPR018080 Band 7/stomatin-like, conserved site Y11_03001 b171e8186ebc2821814993e1e0f7b7fe 235 SUPERFAMILY SSF55174 1 55 2.36E-11 T 13-10-2018 Y11_03001 b171e8186ebc2821814993e1e0f7b7fe 235 Pfam PF01479 S4 domain 1 46 6.0E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_03001 b171e8186ebc2821814993e1e0f7b7fe 235 SMART SM00363 1 69 1.7E-7 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_03001 b171e8186ebc2821814993e1e0f7b7fe 235 Gene3D G3DSA:3.30.70.1560 128 209 1.0E-60 T 13-10-2018 Y11_03001 b171e8186ebc2821814993e1e0f7b7fe 235 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 1.9E-58 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Y11_03001 b171e8186ebc2821814993e1e0f7b7fe 235 Pfam PF00849 RNA pseudouridylate synthase 62 192 2.4E-19 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_03001 b171e8186ebc2821814993e1e0f7b7fe 235 Gene3D G3DSA:3.30.70.580 63 227 1.0E-60 T 13-10-2018 Y11_03001 b171e8186ebc2821814993e1e0f7b7fe 235 Gene3D G3DSA:3.10.290.10 1 62 5.5E-21 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Y11_03001 b171e8186ebc2821814993e1e0f7b7fe 235 SUPERFAMILY SSF55120 61 227 1.15E-47 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_03001 b171e8186ebc2821814993e1e0f7b7fe 235 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Y11_33911 07b0e2de73a10486b64aabacefcc3ce5 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 1.6E-101 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Y11_33911 07b0e2de73a10486b64aabacefcc3ce5 274 Gene3D G3DSA:3.10.310.10 3 270 5.5E-106 T 13-10-2018 Y11_33911 07b0e2de73a10486b64aabacefcc3ce5 274 Pfam PF01678 Diaminopimelate epimerase 3 123 1.4E-33 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Y11_33911 07b0e2de73a10486b64aabacefcc3ce5 274 Pfam PF01678 Diaminopimelate epimerase 152 267 1.7E-31 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Y11_33911 07b0e2de73a10486b64aabacefcc3ce5 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 13-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Y11_33911 07b0e2de73a10486b64aabacefcc3ce5 274 SUPERFAMILY SSF54506 2 273 4.82E-53 T 13-10-2018 Y11_33911 07b0e2de73a10486b64aabacefcc3ce5 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.102 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Y11_33911 07b0e2de73a10486b64aabacefcc3ce5 274 Gene3D G3DSA:3.10.310.10 115 261 5.5E-106 T 13-10-2018 Y11_30841 49932a0e8b5a2446950a151d72e964d2 147 Pfam PF02264 LamB porin 32 139 6.3E-22 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Y11_30841 49932a0e8b5a2446950a151d72e964d2 147 SUPERFAMILY SSF56935 29 137 5.07E-25 T 13-10-2018 Y11_30841 49932a0e8b5a2446950a151d72e964d2 147 Gene3D G3DSA:2.40.170.10 28 143 2.0E-26 T 13-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 Y11_30841 49932a0e8b5a2446950a151d72e964d2 147 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 60 139 8.0E-4 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Y11_26121 83a1355604db1e8eb0af1b8412ccfbb5 502 SUPERFAMILY SSF53098 155 277 1.31E-5 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_26121 83a1355604db1e8eb0af1b8412ccfbb5 502 Gene3D G3DSA:1.10.10.60 7 41 6.2E-6 T 13-10-2018 Y11_26121 83a1355604db1e8eb0af1b8412ccfbb5 502 Pfam PF00665 Integrase core domain 132 254 2.5E-16 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_21581 111864160c31f1b4c8accaa1f52aa20f 346 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 13 333 6.1E-125 T 13-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Y11_21581 111864160c31f1b4c8accaa1f52aa20f 346 Gene3D G3DSA:1.20.120.420 6 141 4.8E-30 T 13-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Y11_21581 111864160c31f1b4c8accaa1f52aa20f 346 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 40 334 3.1E-92 T 13-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Y11_21581 111864160c31f1b4c8accaa1f52aa20f 346 SUPERFAMILY SSF100950 15 339 7.44E-106 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_21581 111864160c31f1b4c8accaa1f52aa20f 346 Gene3D G3DSA:3.40.50.10470 146 341 1.1E-64 T 13-10-2018 Y11_21581 111864160c31f1b4c8accaa1f52aa20f 346 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 3 345 35.73 T 13-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Y11_21581 111864160c31f1b4c8accaa1f52aa20f 346 Pfam PF01008 Initiation factor 2 subunit family 53 334 2.2E-66 T 13-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 Y11_15731 3fdef93d291e01db7c916d0a82fb1f26 248 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 99 116 - T 13-10-2018 IPR018046 Pili assembly chaperone, conserved site Y11_15731 3fdef93d291e01db7c916d0a82fb1f26 248 Gene3D G3DSA:2.60.40.10 148 241 8.9E-22 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_15731 3fdef93d291e01db7c916d0a82fb1f26 248 PRINTS PR00969 Pili chaperone signature 72 93 2.4E-33 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_15731 3fdef93d291e01db7c916d0a82fb1f26 248 PRINTS PR00969 Pili chaperone signature 100 117 2.4E-33 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_15731 3fdef93d291e01db7c916d0a82fb1f26 248 PRINTS PR00969 Pili chaperone signature 23 32 2.4E-33 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_15731 3fdef93d291e01db7c916d0a82fb1f26 248 PRINTS PR00969 Pili chaperone signature 126 141 2.4E-33 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_15731 3fdef93d291e01db7c916d0a82fb1f26 248 PRINTS PR00969 Pili chaperone signature 166 181 2.4E-33 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_15731 3fdef93d291e01db7c916d0a82fb1f26 248 Gene3D G3DSA:2.60.40.10 24 145 2.6E-44 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_15731 3fdef93d291e01db7c916d0a82fb1f26 248 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 171 231 3.7E-16 T 13-10-2018 IPR016148 Pili assembly chaperone, C-terminal Y11_15731 3fdef93d291e01db7c916d0a82fb1f26 248 SUPERFAMILY SSF49354 19 144 1.52E-41 T 13-10-2018 IPR008962 PapD-like superfamily Y11_15731 3fdef93d291e01db7c916d0a82fb1f26 248 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 144 5.2E-44 T 13-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Y11_15731 3fdef93d291e01db7c916d0a82fb1f26 248 SUPERFAMILY SSF49584 138 234 3.53E-17 T 13-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily Y11_06771 d5012a8e81ff748053384a0de859a5ea 420 Pfam PF07005 Putative sugar-binding N-terminal domain 3 226 4.5E-68 T 13-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain Y11_06771 d5012a8e81ff748053384a0de859a5ea 420 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 254 411 2.9E-39 T 13-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain Y11_06771 d5012a8e81ff748053384a0de859a5ea 420 Gene3D G3DSA:3.40.980.20 243 419 1.3E-58 T 13-10-2018 Y11_06771 d5012a8e81ff748053384a0de859a5ea 420 SUPERFAMILY SSF142764 3 416 4.71E-130 T 13-10-2018 Y11_06771 d5012a8e81ff748053384a0de859a5ea 420 Gene3D G3DSA:3.40.50.10840 1 234 2.3E-85 T 13-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily Y11_31541 c9fd2b73d560411718325e2ede845459 463 TIGRFAM TIGR01319 glmL_fam: conserved hypothetical protein 6 461 4.2E-198 T 13-10-2018 IPR006230 Protein MutL Y11_31541 c9fd2b73d560411718325e2ede845459 463 Pfam PF13941 MutL protein 4 456 4.9E-125 T 13-10-2018 IPR006230 Protein MutL Y11_31541 c9fd2b73d560411718325e2ede845459 463 PIRSF PIRSF004729 1 463 1.1E-171 T 13-10-2018 IPR006230 Protein MutL Y11_22201 ccb29afc5d7ee7d491e209dee94042f0 452 Gene3D G3DSA:1.20.1250.20 200 380 2.1E-18 T 13-10-2018 Y11_22201 ccb29afc5d7ee7d491e209dee94042f0 452 Pfam PF07690 Major Facilitator Superfamily 12 285 3.4E-19 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_22201 ccb29afc5d7ee7d491e209dee94042f0 452 SUPERFAMILY SSF103473 7 370 9.68E-41 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_22201 ccb29afc5d7ee7d491e209dee94042f0 452 Gene3D G3DSA:1.20.1250.20 6 184 5.1E-13 T 13-10-2018 Y11_03231 3f8ebb99852e66fb0ba8be6a0950da82 140 SUPERFAMILY SSF55811 4 133 1.22E-33 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Y11_03231 3f8ebb99852e66fb0ba8be6a0950da82 140 Pfam PF00293 NUDIX domain 5 127 9.3E-27 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Y11_03231 3f8ebb99852e66fb0ba8be6a0950da82 140 Gene3D G3DSA:3.90.79.10 1 132 1.1E-36 T 13-10-2018 Y11_03231 3f8ebb99852e66fb0ba8be6a0950da82 140 PRINTS PR00502 NUDIX hydrolase family signature 31 45 4.8E-9 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Y11_03231 3f8ebb99852e66fb0ba8be6a0950da82 140 PRINTS PR00502 NUDIX hydrolase family signature 45 60 4.8E-9 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Y11_03231 3f8ebb99852e66fb0ba8be6a0950da82 140 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Y11_07001 b6b815da98e3501522c4696bb799afe0 660 SUPERFAMILY SSF88713 53 257 3.52E-35 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Y11_07001 b6b815da98e3501522c4696bb799afe0 660 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 36 652 1.9E-278 T 13-10-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 Y11_07001 b6b815da98e3501522c4696bb799afe0 660 Gene3D G3DSA:3.20.20.80 295 659 3.6E-147 T 13-10-2018 Y11_07001 b6b815da98e3501522c4696bb799afe0 660 Pfam PF01522 Polysaccharide deacetylase 90 257 1.3E-27 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Y11_07001 b6b815da98e3501522c4696bb799afe0 660 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 305 632 4.9E-151 T 13-10-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal Y11_07001 b6b815da98e3501522c4696bb799afe0 660 Gene3D G3DSA:3.20.20.370 29 294 8.5E-77 T 13-10-2018 Y11_10261 5adeba4667853ef806db43796f68a331 303 Gene3D G3DSA:1.10.10.60 58 122 3.3E-21 T 13-10-2018 Y11_10261 5adeba4667853ef806db43796f68a331 303 Pfam PF06445 GyrI-like small molecule binding domain 129 278 3.6E-14 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain Y11_10261 5adeba4667853ef806db43796f68a331 303 SUPERFAMILY SSF55136 127 270 3.14E-14 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Y11_10261 5adeba4667853ef806db43796f68a331 303 SUPERFAMILY SSF46689 9 57 5.08E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_10261 5adeba4667853ef806db43796f68a331 303 SUPERFAMILY SSF46689 61 108 1.0E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_10261 5adeba4667853ef806db43796f68a331 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 8.7E-8 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_10261 5adeba4667853ef806db43796f68a331 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 8.7E-8 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_10261 5adeba4667853ef806db43796f68a331 303 SMART SM00342 23 106 6.2E-30 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_10261 5adeba4667853ef806db43796f68a331 303 Gene3D G3DSA:1.10.10.60 7 57 1.3E-20 T 13-10-2018 Y11_10261 5adeba4667853ef806db43796f68a331 303 Gene3D G3DSA:3.20.80.10 125 288 4.2E-18 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Y11_10261 5adeba4667853ef806db43796f68a331 303 Pfam PF12833 Helix-turn-helix domain 30 107 2.1E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_13551 6568929f1c4196cb78f0ef125d353a8d 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 9.8E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_13551 6568929f1c4196cb78f0ef125d353a8d 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 9.8E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_13551 6568929f1c4196cb78f0ef125d353a8d 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 9.8E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_13551 6568929f1c4196cb78f0ef125d353a8d 218 SMART SM00421 146 203 1.5E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_13551 6568929f1c4196cb78f0ef125d353a8d 218 SUPERFAMILY SSF52172 3 131 1.57E-32 T 13-10-2018 IPR011006 CheY-like superfamily Y11_13551 6568929f1c4196cb78f0ef125d353a8d 218 SMART SM00448 2 115 8.4E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_13551 6568929f1c4196cb78f0ef125d353a8d 218 Pfam PF00072 Response regulator receiver domain 4 116 6.1E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_13551 6568929f1c4196cb78f0ef125d353a8d 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 2.6E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_13551 6568929f1c4196cb78f0ef125d353a8d 218 Gene3D G3DSA:3.40.50.12740 2 209 1.1E-57 T 13-10-2018 Y11_13551 6568929f1c4196cb78f0ef125d353a8d 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_13551 6568929f1c4196cb78f0ef125d353a8d 218 SUPERFAMILY SSF46894 138 210 4.08E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_p0421 99809443326f448a35c0787968c507b5 321 SMART SM00470 71 158 4.3E-10 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Y11_p0421 99809443326f448a35c0787968c507b5 321 SUPERFAMILY SSF109709 152 256 6.41E-5 T 13-10-2018 Y11_p0421 99809443326f448a35c0787968c507b5 321 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 79 246 8.4E-37 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Y11_p0421 99809443326f448a35c0787968c507b5 321 Gene3D G3DSA:1.10.10.2830 161 271 2.0E-31 T 13-10-2018 Y11_p0421 99809443326f448a35c0787968c507b5 321 SUPERFAMILY SSF110849 85 160 8.63E-13 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Y11_p0421 99809443326f448a35c0787968c507b5 321 Pfam PF02195 ParB-like nuclease domain 83 157 9.7E-12 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Y11_03951 a529c92172818cf718bbcd8564f12493 236 SUPERFAMILY SSF55729 3 229 1.38E-94 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_03951 a529c92172818cf718bbcd8564f12493 236 Gene3D G3DSA:2.30.210.20 2 61 5.1E-27 T 13-10-2018 Y11_03951 a529c92172818cf718bbcd8564f12493 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 97.264 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Y11_03951 a529c92172818cf718bbcd8564f12493 236 Gene3D G3DSA:3.40.630.70 62 235 5.2E-69 T 13-10-2018 Y11_03951 a529c92172818cf718bbcd8564f12493 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 203 4.6E-73 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Y11_03951 a529c92172818cf718bbcd8564f12493 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 39 214 9.2E-76 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Y11_26101 b7d699a1e3a25060da63143b1aa0de45 383 SUPERFAMILY SSF53335 1 374 2.27E-64 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_26101 b7d699a1e3a25060da63143b1aa0de45 383 Gene3D G3DSA:3.40.50.150 1 212 2.9E-40 T 13-10-2018 Y11_26101 b7d699a1e3a25060da63143b1aa0de45 383 Gene3D G3DSA:3.90.120.10 250 366 8.9E-5 T 13-10-2018 Y11_26101 b7d699a1e3a25060da63143b1aa0de45 383 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 3 373 5.5E-41 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Y11_26101 b7d699a1e3a25060da63143b1aa0de45 383 Pfam PF00145 C-5 cytosine-specific DNA methylase 1 373 1.3E-44 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Y11_26101 b7d699a1e3a25060da63143b1aa0de45 383 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 112 126 1.1E-9 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Y11_26101 b7d699a1e3a25060da63143b1aa0de45 383 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 2 18 1.1E-9 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Y11_26101 b7d699a1e3a25060da63143b1aa0de45 383 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 157 170 1.1E-9 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Y11_01431 dc677e7cf9d7cbe73dde5cda108673f1 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Y11_01431 dc677e7cf9d7cbe73dde5cda108673f1 436 PIRSF PIRSF000429 9 436 4.9E-122 T 13-10-2018 IPR002155 Thiolase GO:0016747 Y11_01431 dc677e7cf9d7cbe73dde5cda108673f1 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 9.1E-37 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Y11_01431 dc677e7cf9d7cbe73dde5cda108673f1 436 SUPERFAMILY SSF53901 15 295 1.01E-62 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_01431 dc677e7cf9d7cbe73dde5cda108673f1 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Y11_01431 dc677e7cf9d7cbe73dde5cda108673f1 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 9.9E-132 T 13-10-2018 IPR002155 Thiolase GO:0016747 Y11_01431 dc677e7cf9d7cbe73dde5cda108673f1 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 8.0E-252 T 13-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 Y11_01431 dc677e7cf9d7cbe73dde5cda108673f1 436 SUPERFAMILY SSF53901 297 435 4.07E-32 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_01431 dc677e7cf9d7cbe73dde5cda108673f1 436 Gene3D G3DSA:3.40.47.10 8 435 1.7E-114 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_01431 dc677e7cf9d7cbe73dde5cda108673f1 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 1.2E-62 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Y11_01431 dc677e7cf9d7cbe73dde5cda108673f1 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 Y11_01431 dc677e7cf9d7cbe73dde5cda108673f1 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 69.326 T 13-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 Y11_27101 380c7c3942697b8725eebb987335c479 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 4.2E-174 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Y11_27101 380c7c3942697b8725eebb987335c479 489 SMART SM00316 37 122 2.1E-9 T 13-10-2018 IPR022967 RNA-binding domain, S1 Y11_27101 380c7c3942697b8725eebb987335c479 489 Gene3D G3DSA:2.40.50.140 31 127 4.1E-31 T 13-10-2018 Y11_27101 380c7c3942697b8725eebb987335c479 489 Gene3D G3DSA:3.40.1260.20 402 488 6.3E-6 T 13-10-2018 Y11_27101 380c7c3942697b8725eebb987335c479 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.2E-101 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Y11_27101 380c7c3942697b8725eebb987335c479 489 SUPERFAMILY SSF50249 39 128 6.0E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_27101 380c7c3942697b8725eebb987335c479 489 Pfam PF00575 S1 RNA binding domain 38 109 3.2E-6 T 13-10-2018 IPR003029 S1 domain GO:0003676 Y11_26891 4814d8184662c0af540465e4f4639a66 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Y11_26891 4814d8184662c0af540465e4f4639a66 497 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 44 490 3.5E-203 T 13-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 Y11_26891 4814d8184662c0af540465e4f4639a66 497 Gene3D G3DSA:3.40.309.10 272 461 3.3E-179 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Y11_26891 4814d8184662c0af540465e4f4639a66 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 268 275 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Y11_26891 4814d8184662c0af540465e4f4639a66 497 SUPERFAMILY SSF53720 24 495 3.14E-167 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Y11_26891 4814d8184662c0af540465e4f4639a66 497 Pfam PF00171 Aldehyde dehydrogenase family 35 491 2.4E-169 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Y11_26891 4814d8184662c0af540465e4f4639a66 497 Gene3D G3DSA:3.40.605.10 39 486 3.3E-179 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Y11_20681 4ae3bfbc886df1aa2c1f7708217a3dfb 303 Gene3D G3DSA:3.40.50.720 1 167 2.8E-55 T 13-10-2018 Y11_20681 4ae3bfbc886df1aa2c1f7708217a3dfb 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 6.1E-34 T 13-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain Y11_20681 4ae3bfbc886df1aa2c1f7708217a3dfb 303 SUPERFAMILY SSF48179 168 289 9.52E-35 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_20681 4ae3bfbc886df1aa2c1f7708217a3dfb 303 SUPERFAMILY SSF51735 1 167 6.75E-60 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_20681 4ae3bfbc886df1aa2c1f7708217a3dfb 303 Gene3D G3DSA:1.10.1040.10 168 290 7.1E-44 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Y11_20681 4ae3bfbc886df1aa2c1f7708217a3dfb 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 143 6.5E-24 T 13-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain Y11_20681 4ae3bfbc886df1aa2c1f7708217a3dfb 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 2.7E-82 T 13-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 Y11_31601 957c82fe07a7100895407af8779c4743 548 Pfam PF05683 Fumarase C-terminus 332 537 4.2E-89 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Y11_31601 957c82fe07a7100895407af8779c4743 548 Gene3D G3DSA:3.20.130.10 347 537 1.8E-57 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Y11_31601 957c82fe07a7100895407af8779c4743 548 PIRSF PIRSF001394 30 548 3.8E-214 T 13-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 Y11_31601 957c82fe07a7100895407af8779c4743 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 372 536 1.4E-56 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Y11_31601 957c82fe07a7100895407af8779c4743 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Y11_31601 957c82fe07a7100895407af8779c4743 548 Pfam PF05681 Fumarate hydratase (Fumerase) 52 326 4.4E-78 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Y11_31601 957c82fe07a7100895407af8779c4743 548 SUPERFAMILY SSF117457 361 536 3.53E-59 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Y11_36911 ee8dc01d6c8a1b80c8dfb5bc96374c5f 674 SUPERFAMILY SSF48230 24 317 1.28E-36 T 13-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Y11_36911 ee8dc01d6c8a1b80c8dfb5bc96374c5f 674 Gene3D G3DSA:2.70.98.70 373 670 1.1E-43 T 13-10-2018 Y11_36911 ee8dc01d6c8a1b80c8dfb5bc96374c5f 674 Pfam PF07940 Heparinase II/III-like protein 375 553 3.0E-19 T 13-10-2018 IPR012480 Heparinase II/III-like GO:0016829 Y11_36911 ee8dc01d6c8a1b80c8dfb5bc96374c5f 674 Pfam PF05426 Alginate lyase 108 274 1.2E-4 T 13-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 Y11_36911 ee8dc01d6c8a1b80c8dfb5bc96374c5f 674 Gene3D G3DSA:1.50.10.100 71 357 7.7E-68 T 13-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Y11_28181 658d7cfd2dbc10bcc4053db1ea4fbb34 732 SMART SM00487 195 391 9.7E-17 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Y11_28181 658d7cfd2dbc10bcc4053db1ea4fbb34 732 Gene3D G3DSA:3.40.50.300 184 379 2.4E-81 T 13-10-2018 Y11_28181 658d7cfd2dbc10bcc4053db1ea4fbb34 732 SUPERFAMILY SSF52540 220 601 1.44E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_28181 658d7cfd2dbc10bcc4053db1ea4fbb34 732 Pfam PF00271 Helicase conserved C-terminal domain 522 589 2.0E-5 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_28181 658d7cfd2dbc10bcc4053db1ea4fbb34 732 SMART SM00490 492 589 1.1E-7 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_28181 658d7cfd2dbc10bcc4053db1ea4fbb34 732 Pfam PF00270 DEAD/DEAH box helicase 219 364 7.1E-14 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Y11_28181 658d7cfd2dbc10bcc4053db1ea4fbb34 732 Gene3D G3DSA:1.10.8.630 2 113 2.8E-34 T 13-10-2018 Y11_28181 658d7cfd2dbc10bcc4053db1ea4fbb34 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 3.6E-204 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Y11_28181 658d7cfd2dbc10bcc4053db1ea4fbb34 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 25.406 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Y11_32051 73df379e82e3717075ace49d1ac0eade 771 SUPERFAMILY SSF52540 4 182 1.23E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_32051 73df379e82e3717075ace49d1ac0eade 771 Gene3D G3DSA:3.40.50.300 1 168 1.3E-48 T 13-10-2018 Y11_32051 73df379e82e3717075ace49d1ac0eade 771 Pfam PF07670 Nucleoside recognition 354 444 6.5E-12 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Y11_32051 73df379e82e3717075ace49d1ac0eade 771 Pfam PF07670 Nucleoside recognition 513 690 3.9E-37 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Y11_32051 73df379e82e3717075ace49d1ac0eade 771 Pfam PF07664 Ferrous iron transport protein B C terminus 456 508 7.1E-22 T 13-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 Y11_32051 73df379e82e3717075ace49d1ac0eade 771 Pfam PF02421 Ferrous iron transport protein B 5 163 2.7E-65 T 13-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 Y11_32051 73df379e82e3717075ace49d1ac0eade 771 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 688 1.8E-225 T 13-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 Y11_33861 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.559 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Y11_33861 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 Gene3D G3DSA:3.40.190.10 6 216 5.3E-83 T 13-10-2018 Y11_33861 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 1.4E-49 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Y11_33861 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 1.4E-49 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Y11_33861 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 1.4E-49 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Y11_33861 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 1.4E-49 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Y11_33861 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 1.4E-49 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Y11_33861 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 SUPERFAMILY SSF53850 5 219 5.52E-85 T 13-10-2018 Y11_33861 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 PIRSF PIRSF001438 1 311 4.2E-121 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Y11_33861 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 Gene3D G3DSA:3.40.190.10 100 199 5.3E-83 T 13-10-2018 Y11_33861 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 SUPERFAMILY SSF54782 220 309 5.1E-30 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Y11_33861 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 2.0E-112 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Y11_33861 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 3.2E-77 T 13-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Y11_33861 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 13-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Y11_33861 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 7.0E-23 T 13-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Y11_33861 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 Gene3D G3DSA:3.30.160.40 221 306 4.6E-32 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Y11_33031 9c9c08750d71fedab94e7b0fcd94eebe 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 1.0E-43 T 13-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_33031 9c9c08750d71fedab94e7b0fcd94eebe 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.133 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_33031 9c9c08750d71fedab94e7b0fcd94eebe 117 Gene3D G3DSA:3.30.420.100 1 117 3.0E-46 T 13-10-2018 Y11_33031 9c9c08750d71fedab94e7b0fcd94eebe 117 SUPERFAMILY SSF53137 3 115 4.14E-53 T 13-10-2018 Y11_33031 9c9c08750d71fedab94e7b0fcd94eebe 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 6.5E-46 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_27041 07c49f618041d25956a841a4dc438afa 890 Gene3D G3DSA:2.180.10.10 7 668 4.6E-232 T 13-10-2018 Y11_27041 07c49f618041d25956a841a4dc438afa 890 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 589 668 1.2E-25 T 13-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 Y11_27041 07c49f618041d25956a841a4dc438afa 890 Gene3D G3DSA:3.90.210.10 695 781 8.3E-6 T 13-10-2018 Y11_27041 07c49f618041d25956a841a4dc438afa 890 SUPERFAMILY SSF56399 696 771 5.32E-7 T 13-10-2018 Y11_27041 07c49f618041d25956a841a4dc438afa 890 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 220 246 0.0013 T 13-10-2018 IPR006530 YD repeat Y11_19911 39d4402cbbd58fb431d99c2576531489 336 SUPERFAMILY SSF51735 1 334 2.14E-93 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_19911 39d4402cbbd58fb431d99c2576531489 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 260 5.6E-56 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Y11_19911 39d4402cbbd58fb431d99c2576531489 336 Gene3D G3DSA:3.40.50.720 3 272 3.6E-135 T 13-10-2018 Y11_19911 39d4402cbbd58fb431d99c2576531489 336 Gene3D G3DSA:3.90.25.10 194 327 3.6E-135 T 13-10-2018 Y11_19911 39d4402cbbd58fb431d99c2576531489 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 333 3.5E-133 T 13-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Y11_39691 af0a21c3922d03c67e3bc39835af8318 114 Gene3D G3DSA:2.60.300.12 9 114 3.4E-34 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Y11_39691 af0a21c3922d03c67e3bc39835af8318 114 SUPERFAMILY SSF89360 8 103 5.89E-31 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Y11_39691 af0a21c3922d03c67e3bc39835af8318 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 4.9E-39 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Y11_39691 af0a21c3922d03c67e3bc39835af8318 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.592 T 13-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 Y11_39691 af0a21c3922d03c67e3bc39835af8318 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Y11_39691 af0a21c3922d03c67e3bc39835af8318 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 1.9E-20 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Y11_43041 60df56eefa446b091e506e6007a45220 525 SUPERFAMILY SSF54810 405 525 2.09E-51 T 13-10-2018 Y11_43041 60df56eefa446b091e506e6007a45220 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 2.0E-83 T 13-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Y11_43041 60df56eefa446b091e506e6007a45220 525 Pfam PF02540 NAD synthase 223 255 4.8E-6 T 13-10-2018 IPR022310 NAD/GMP synthase Y11_43041 60df56eefa446b091e506e6007a45220 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 5.1E-6 T 13-10-2018 Y11_43041 60df56eefa446b091e506e6007a45220 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 5.1E-6 T 13-10-2018 Y11_43041 60df56eefa446b091e506e6007a45220 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 5.1E-6 T 13-10-2018 Y11_43041 60df56eefa446b091e506e6007a45220 525 Gene3D G3DSA:3.40.50.880 9 206 2.7E-55 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_43041 60df56eefa446b091e506e6007a45220 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 1.8E-39 T 13-10-2018 IPR017926 Glutamine amidotransferase Y11_43041 60df56eefa446b091e506e6007a45220 525 SUPERFAMILY SSF52402 194 446 2.65E-55 T 13-10-2018 Y11_43041 60df56eefa446b091e506e6007a45220 525 Gene3D G3DSA:3.30.300.10 406 525 1.3E-51 T 13-10-2018 Y11_43041 60df56eefa446b091e506e6007a45220 525 Pfam PF00958 GMP synthase C terminal domain 433 524 6.4E-44 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Y11_43041 60df56eefa446b091e506e6007a45220 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 1.7E-153 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Y11_43041 60df56eefa446b091e506e6007a45220 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 8.9E-8 T 13-10-2018 Y11_43041 60df56eefa446b091e506e6007a45220 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 8.9E-8 T 13-10-2018 Y11_43041 60df56eefa446b091e506e6007a45220 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 8.9E-8 T 13-10-2018 Y11_43041 60df56eefa446b091e506e6007a45220 525 Gene3D G3DSA:3.40.50.620 209 405 2.3E-72 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_43041 60df56eefa446b091e506e6007a45220 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 1.1E-6 T 13-10-2018 Y11_43041 60df56eefa446b091e506e6007a45220 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.1E-6 T 13-10-2018 Y11_43041 60df56eefa446b091e506e6007a45220 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.1E-6 T 13-10-2018 Y11_43041 60df56eefa446b091e506e6007a45220 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 55.879 T 13-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 Y11_43041 60df56eefa446b091e506e6007a45220 525 SUPERFAMILY SSF52317 4 204 9.34E-56 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_10761 1a76b4fe31814f85b5f3d628030329da 201 Gene3D G3DSA:3.40.50.880 6 197 4.7E-60 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_10761 1a76b4fe31814f85b5f3d628030329da 201 SUPERFAMILY SSF52317 8 196 9.35E-47 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_10761 1a76b4fe31814f85b5f3d628030329da 201 Pfam PF00117 Glutamine amidotransferase class-I 11 191 5.3E-44 T 13-10-2018 IPR017926 Glutamine amidotransferase Y11_10761 1a76b4fe31814f85b5f3d628030329da 201 PRINTS PR00097 Anthranilate synthase component II signature 171 184 1.3E-36 T 13-10-2018 Y11_10761 1a76b4fe31814f85b5f3d628030329da 201 PRINTS PR00097 Anthranilate synthase component II signature 9 23 1.3E-36 T 13-10-2018 Y11_10761 1a76b4fe31814f85b5f3d628030329da 201 PRINTS PR00097 Anthranilate synthase component II signature 57 66 1.3E-36 T 13-10-2018 Y11_10761 1a76b4fe31814f85b5f3d628030329da 201 PRINTS PR00097 Anthranilate synthase component II signature 84 95 1.3E-36 T 13-10-2018 Y11_10761 1a76b4fe31814f85b5f3d628030329da 201 PRINTS PR00097 Anthranilate synthase component II signature 109 117 1.3E-36 T 13-10-2018 Y11_10761 1a76b4fe31814f85b5f3d628030329da 201 PRINTS PR00097 Anthranilate synthase component II signature 129 141 1.3E-36 T 13-10-2018 Y11_10761 1a76b4fe31814f85b5f3d628030329da 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 84 95 4.9E-14 T 13-10-2018 Y11_10761 1a76b4fe31814f85b5f3d628030329da 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 57 66 4.9E-14 T 13-10-2018 Y11_10761 1a76b4fe31814f85b5f3d628030329da 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 171 184 4.9E-14 T 13-10-2018 Y11_10761 1a76b4fe31814f85b5f3d628030329da 201 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 9 192 1.4E-55 T 13-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Y11_10761 1a76b4fe31814f85b5f3d628030329da 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 84 100 2.9E-6 T 13-10-2018 Y11_10761 1a76b4fe31814f85b5f3d628030329da 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 54 68 2.9E-6 T 13-10-2018 Y11_12841 29aa8f7c17696d9ab9f4ccdcffb99b20 148 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 2 140 4.7E-36 T 13-10-2018 IPR006522 Phage virion morphogensis protein Y11_12841 29aa8f7c17696d9ab9f4ccdcffb99b20 148 Pfam PF05069 Phage virion morphogenesis family 3 145 2.3E-37 T 13-10-2018 IPR006522 Phage virion morphogensis protein Y11_41331 149341c122956ed9072e44ad7c6bd33e 217 Gene3D G3DSA:1.10.3720.10 1 217 6.0E-61 T 13-10-2018 IPR035906 MetI-like superfamily Y11_41331 149341c122956ed9072e44ad7c6bd33e 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 214 2.1E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_41331 149341c122956ed9072e44ad7c6bd33e 217 SUPERFAMILY SSF161098 10 201 9.29E-48 T 13-10-2018 IPR035906 MetI-like superfamily Y11_26361 e32adaf771bed13ad75fda7dd1e50cd0 362 PRINTS PR00834 HtrA/DegQ protease family signature 150 174 2.6E-46 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_26361 e32adaf771bed13ad75fda7dd1e50cd0 362 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 2.6E-46 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_26361 e32adaf771bed13ad75fda7dd1e50cd0 362 PRINTS PR00834 HtrA/DegQ protease family signature 207 224 2.6E-46 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_26361 e32adaf771bed13ad75fda7dd1e50cd0 362 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 2.6E-46 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_26361 e32adaf771bed13ad75fda7dd1e50cd0 362 PRINTS PR00834 HtrA/DegQ protease family signature 185 202 2.6E-46 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_26361 e32adaf771bed13ad75fda7dd1e50cd0 362 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 2.6E-46 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_26361 e32adaf771bed13ad75fda7dd1e50cd0 362 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 349 2.4E-155 T 13-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 Y11_26361 e32adaf771bed13ad75fda7dd1e50cd0 362 Pfam PF13365 Trypsin-like peptidase domain 80 214 1.1E-26 T 13-10-2018 Y11_26361 e32adaf771bed13ad75fda7dd1e50cd0 362 Gene3D G3DSA:2.30.42.10 257 351 2.3E-18 T 13-10-2018 Y11_26361 e32adaf771bed13ad75fda7dd1e50cd0 362 SUPERFAMILY SSF50156 239 346 9.99E-20 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Y11_26361 e32adaf771bed13ad75fda7dd1e50cd0 362 SMART SM00228 256 338 3.5E-11 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Y11_26361 e32adaf771bed13ad75fda7dd1e50cd0 362 Gene3D G3DSA:2.40.10.10 141 256 5.3E-39 T 13-10-2018 Y11_26361 e32adaf771bed13ad75fda7dd1e50cd0 362 Gene3D G3DSA:2.40.10.10 36 140 1.1E-27 T 13-10-2018 Y11_26361 e32adaf771bed13ad75fda7dd1e50cd0 362 Pfam PF13180 PDZ domain 278 346 1.2E-11 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Y11_26361 e32adaf771bed13ad75fda7dd1e50cd0 362 SUPERFAMILY SSF50494 45 253 2.08E-58 T 13-10-2018 IPR009003 Peptidase S1, PA clan Y11_26161 ba6507762d4e01e5a85658e64dadaf22 653 Gene3D G3DSA:1.25.40.10 24 147 3.7E-43 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_26161 ba6507762d4e01e5a85658e64dadaf22 653 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 6 647 36.828 T 13-10-2018 IPR007443 Penicillin-binding protein activator LpoA Y11_26161 ba6507762d4e01e5a85658e64dadaf22 653 Pfam PF04348 LppC putative lipoprotein 327 647 2.9E-90 T 13-10-2018 IPR007443 Penicillin-binding protein activator LpoA Y11_26161 ba6507762d4e01e5a85658e64dadaf22 653 Pfam PF04348 LppC putative lipoprotein 40 296 3.0E-53 T 13-10-2018 IPR007443 Penicillin-binding protein activator LpoA Y11_26161 ba6507762d4e01e5a85658e64dadaf22 653 Gene3D G3DSA:1.25.40.650 148 255 2.1E-41 T 13-10-2018 Y11_26161 ba6507762d4e01e5a85658e64dadaf22 653 Gene3D G3DSA:3.40.50.2300 457 640 6.6E-25 T 13-10-2018 Y11_26161 ba6507762d4e01e5a85658e64dadaf22 653 SUPERFAMILY SSF53822 258 650 2.35E-77 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_02471 3fd1c0c985832e4079159f2b0cd5a2ef 323 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 307 4.3E-113 T 13-10-2018 Y11_02471 3fd1c0c985832e4079159f2b0cd5a2ef 323 SUPERFAMILY SSF51604 108 315 6.16E-49 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Y11_02471 3fd1c0c985832e4079159f2b0cd5a2ef 323 SUPERFAMILY SSF54826 1 97 2.08E-28 T 13-10-2018 Y11_02471 3fd1c0c985832e4079159f2b0cd5a2ef 323 Gene3D G3DSA:3.30.390.10 4 302 3.6E-124 T 13-10-2018 IPR029017 Enolase-like, N-terminal Y11_02471 3fd1c0c985832e4079159f2b0cd5a2ef 323 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 321 23.072 T 13-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 Y11_02471 3fd1c0c985832e4079159f2b0cd5a2ef 323 SMART SM00922 115 210 9.8E-9 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Y11_02471 3fd1c0c985832e4079159f2b0cd5a2ef 323 Gene3D G3DSA:3.20.20.120 98 295 3.6E-124 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Y11_02471 3fd1c0c985832e4079159f2b0cd5a2ef 323 Pfam PF13378 Enolase C-terminal domain-like 127 274 1.9E-13 T 13-10-2018 IPR029065 Enolase C-terminal domain-like Y11_20451 5e92c28cbbeb6fabbbe91cd4778f0a6c 567 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 4.6E-38 T 13-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain Y11_20451 5e92c28cbbeb6fabbbe91cd4778f0a6c 567 Gene3D G3DSA:3.40.190.10 116 311 1.8E-25 T 13-10-2018 Y11_20451 5e92c28cbbeb6fabbbe91cd4778f0a6c 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 351 1.3E-16 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain Y11_20451 5e92c28cbbeb6fabbbe91cd4778f0a6c 567 SUPERFAMILY SSF53850 114 562 1.7E-52 T 13-10-2018 Y11_35701 cfd2ad50bba1c7bf27eb3cb308de73b6 345 Pfam PF05171 Haemin-degrading HemS.ChuX domain 29 157 5.5E-44 T 13-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 Y11_35701 cfd2ad50bba1c7bf27eb3cb308de73b6 345 Pfam PF05171 Haemin-degrading HemS.ChuX domain 207 338 4.4E-41 T 13-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 Y11_35701 cfd2ad50bba1c7bf27eb3cb308de73b6 345 Gene3D G3DSA:3.40.1570.10 13 281 1.0E-138 T 13-10-2018 Y11_35701 cfd2ad50bba1c7bf27eb3cb308de73b6 345 SUPERFAMILY SSF144064 5 338 1.08E-132 T 13-10-2018 Y11_35701 cfd2ad50bba1c7bf27eb3cb308de73b6 345 Gene3D G3DSA:3.40.1570.10 82 332 1.0E-138 T 13-10-2018 Y11_37641 1757abcfee093b8564c646543d1f40af 526 Hamap MF_02053 Autoinducer-2 kinase [lsrK]. 11 526 88.176 T 13-10-2018 IPR033676 Autoinducer-2 kinase GO:0009372|GO:0071518 Y11_37641 1757abcfee093b8564c646543d1f40af 526 PIRSF PIRSF000538 7 515 1.9E-115 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Y11_37641 1757abcfee093b8564c646543d1f40af 526 Gene3D G3DSA:3.30.420.40 254 515 5.1E-52 T 13-10-2018 Y11_37641 1757abcfee093b8564c646543d1f40af 526 SUPERFAMILY SSF53067 258 506 3.3E-47 T 13-10-2018 Y11_37641 1757abcfee093b8564c646543d1f40af 526 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 278 463 8.9E-20 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Y11_37641 1757abcfee093b8564c646543d1f40af 526 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 9 256 1.1E-48 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Y11_37641 1757abcfee093b8564c646543d1f40af 526 Gene3D G3DSA:3.30.420.40 5 253 1.3E-61 T 13-10-2018 Y11_37641 1757abcfee093b8564c646543d1f40af 526 SUPERFAMILY SSF53067 9 259 1.52E-58 T 13-10-2018 Y11_24011 31395bb8b44e7ebe795ce181664afde7 163 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 152 2.2E-47 T 13-10-2018 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 Y11_24011 31395bb8b44e7ebe795ce181664afde7 163 SUPERFAMILY SSF53163 1 158 1.41E-43 T 13-10-2018 IPR023430 Peptidase HybD-like domain superfamily Y11_24011 31395bb8b44e7ebe795ce181664afde7 163 PRINTS PR00446 Hydrogen uptake protein signature 56 66 2.9E-22 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Y11_24011 31395bb8b44e7ebe795ce181664afde7 163 PRINTS PR00446 Hydrogen uptake protein signature 35 52 2.9E-22 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Y11_24011 31395bb8b44e7ebe795ce181664afde7 163 PRINTS PR00446 Hydrogen uptake protein signature 67 83 2.9E-22 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Y11_24011 31395bb8b44e7ebe795ce181664afde7 163 PRINTS PR00446 Hydrogen uptake protein signature 15 26 2.9E-22 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Y11_24011 31395bb8b44e7ebe795ce181664afde7 163 PRINTS PR00446 Hydrogen uptake protein signature 3 15 2.9E-22 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Y11_24011 31395bb8b44e7ebe795ce181664afde7 163 Gene3D G3DSA:3.40.50.1450 1 161 7.0E-43 T 13-10-2018 IPR023430 Peptidase HybD-like domain superfamily Y11_24011 31395bb8b44e7ebe795ce181664afde7 163 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 148 3.2E-44 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Y11_24011 31395bb8b44e7ebe795ce181664afde7 163 Pfam PF01750 Hydrogenase maturation protease 20 146 1.1E-32 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Y11_p0791 2a3a90eab9ab11b00c4da36bceddf50b 293 Pfam PF07201 HrpJ-like domain 60 223 4.8E-37 T 13-10-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 Y11_p0791 2a3a90eab9ab11b00c4da36bceddf50b 293 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 36 280 1.4E-42 T 13-10-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 Y11_p0791 2a3a90eab9ab11b00c4da36bceddf50b 293 SUPERFAMILY SSF140591 74 268 1.92E-52 T 13-10-2018 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.6E-93 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.6E-93 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.6E-93 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.6E-93 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.6E-93 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.6E-93 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.6E-93 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.6E-93 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 637 1.6E-131 T 13-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 5.6E-58 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 5.6E-58 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 5.6E-58 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 5.6E-58 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 5.6E-58 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 5.6E-58 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 5.6E-58 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 6.9E-284 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01361 72bd99fde7cd20a6aef5af07fec9cf71 655 Pfam PF01578 Cytochrome C assembly protein 89 296 1.9E-54 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Y11_01761 7556dcfac1a3b67c3e15cb1e215ea323 375 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Y11_01761 7556dcfac1a3b67c3e15cb1e215ea323 375 SUPERFAMILY SSF52283 4 109 6.38E-17 T 13-10-2018 Y11_01761 7556dcfac1a3b67c3e15cb1e215ea323 375 Gene3D G3DSA:3.40.50.720 3 277 2.9E-112 T 13-10-2018 Y11_01761 7556dcfac1a3b67c3e15cb1e215ea323 375 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 280 2.0E-17 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Y11_01761 7556dcfac1a3b67c3e15cb1e215ea323 375 Gene3D G3DSA:3.30.1370.170 293 374 4.4E-33 T 13-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 Y11_01761 7556dcfac1a3b67c3e15cb1e215ea323 375 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 3.4E-31 T 13-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 Y11_01761 7556dcfac1a3b67c3e15cb1e215ea323 375 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Y11_01761 7556dcfac1a3b67c3e15cb1e215ea323 375 Gene3D G3DSA:3.40.50.720 92 257 2.9E-112 T 13-10-2018 Y11_01761 7556dcfac1a3b67c3e15cb1e215ea323 375 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 46.881 T 13-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 Y11_01761 7556dcfac1a3b67c3e15cb1e215ea323 375 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 256 6.9E-31 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Y11_01761 7556dcfac1a3b67c3e15cb1e215ea323 375 SUPERFAMILY SSF51735 91 257 1.7E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 SUPERFAMILY SSF55681 243 525 1.6E-95 T 13-10-2018 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 SMART SM00863 170 219 2.6E-19 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 Gene3D G3DSA:3.10.20.30 1 64 2.5E-22 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 Gene3D G3DSA:3.40.50.800 532 642 6.1E-31 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 33.938 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 Pfam PF03129 Anticodon binding domain 541 628 4.4E-21 T 13-10-2018 IPR004154 Anticodon-binding Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 Gene3D G3DSA:3.30.930.10 223 531 8.8E-128 T 13-10-2018 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 SUPERFAMILY SSF55186 63 241 3.66E-64 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 Gene3D G3DSA:3.30.980.10 69 222 5.9E-62 T 13-10-2018 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 SUPERFAMILY SSF52954 529 636 1.15E-31 T 13-10-2018 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 Pfam PF02824 TGS domain 4 61 1.3E-11 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 SUPERFAMILY SSF81271 3 61 8.94E-17 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 529 2.9E-50 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 9.0E-55 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 9.0E-55 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 9.0E-55 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 9.0E-55 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 9.0E-55 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 Gene3D G3DSA:3.30.54.20 130 187 5.9E-62 T 13-10-2018 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 3.8E-14 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Y11_07851 eb5c3abf4ffe26eaa15e4f674395f166 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 3.5E-242 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Y11_36101 108cca7244bf38c4a3d6e434c04e20f3 181 Gene3D G3DSA:3.40.50.300 10 166 9.9E-48 T 13-10-2018 Y11_36101 108cca7244bf38c4a3d6e434c04e20f3 181 SUPERFAMILY SSF52540 13 157 1.22E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_36101 108cca7244bf38c4a3d6e434c04e20f3 181 Pfam PF01715 IPP transferase 46 175 6.2E-53 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Y11_36101 108cca7244bf38c4a3d6e434c04e20f3 181 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 176 2.3E-71 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Y11_01301 f6eca3e8e606bf00172ba79009940fd0 208 SUPERFAMILY SSF52540 2 188 1.01E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_01301 f6eca3e8e606bf00172ba79009940fd0 208 Pfam PF00005 ABC transporter 18 157 1.9E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_01301 f6eca3e8e606bf00172ba79009940fd0 208 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 201 2.5E-79 T 13-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 Y11_01301 f6eca3e8e606bf00172ba79009940fd0 208 Gene3D G3DSA:3.40.50.300 1 206 1.4E-41 T 13-10-2018 Y11_01301 f6eca3e8e606bf00172ba79009940fd0 208 SMART SM00382 26 194 0.0044 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_01301 f6eca3e8e606bf00172ba79009940fd0 208 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_11781 1a694a37669684df7730a49774f83997 309 SUPERFAMILY SSF53807 18 307 1.32E-80 T 13-10-2018 Y11_11781 1a694a37669684df7730a49774f83997 309 Gene3D G3DSA:3.40.50.1980 18 195 5.0E-58 T 13-10-2018 Y11_11781 1a694a37669684df7730a49774f83997 309 Pfam PF01297 Zinc-uptake complex component A periplasmic 19 304 3.8E-58 T 13-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Y11_11781 1a694a37669684df7730a49774f83997 309 Gene3D G3DSA:3.40.50.1980 196 309 2.8E-42 T 13-10-2018 Y11_08291 2bef8de67203924698bec8895db60584 405 Pfam PF07690 Major Facilitator Superfamily 14 345 7.4E-41 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_08291 2bef8de67203924698bec8895db60584 405 Gene3D G3DSA:1.20.1720.10 7 381 1.2E-80 T 13-10-2018 Y11_08291 2bef8de67203924698bec8895db60584 405 SUPERFAMILY SSF103473 7 383 4.71E-60 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_08291 2bef8de67203924698bec8895db60584 405 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 383 2.5E-108 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Y11_09781 03e24339269cc78d0af1739b26afae18 249 SUPERFAMILY SSF51735 2 229 1.67E-65 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_09781 03e24339269cc78d0af1739b26afae18 249 Gene3D G3DSA:3.40.50.720 1 235 8.5E-70 T 13-10-2018 Y11_09781 03e24339269cc78d0af1739b26afae18 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Y11_09781 03e24339269cc78d0af1739b26afae18 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 3.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09781 03e24339269cc78d0af1739b26afae18 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 3.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09781 03e24339269cc78d0af1739b26afae18 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09781 03e24339269cc78d0af1739b26afae18 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 3.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09781 03e24339269cc78d0af1739b26afae18 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09781 03e24339269cc78d0af1739b26afae18 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 3.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09781 03e24339269cc78d0af1739b26afae18 249 Pfam PF00106 short chain dehydrogenase 2 187 1.6E-55 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09781 03e24339269cc78d0af1739b26afae18 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 4.5E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09781 03e24339269cc78d0af1739b26afae18 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 4.5E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09781 03e24339269cc78d0af1739b26afae18 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.5E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_42351 6b1f0caedfe8fc4f95202131fb90c5b9 332 Gene3D G3DSA:2.10.109.10 87 312 1.1E-74 T 13-10-2018 Y11_42351 6b1f0caedfe8fc4f95202131fb90c5b9 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 151 163 2.7E-26 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Y11_42351 6b1f0caedfe8fc4f95202131fb90c5b9 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 272 291 2.7E-26 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Y11_42351 6b1f0caedfe8fc4f95202131fb90c5b9 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 87 103 2.7E-26 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Y11_42351 6b1f0caedfe8fc4f95202131fb90c5b9 332 Pfam PF00717 Peptidase S24-like 93 165 4.3E-20 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Y11_42351 6b1f0caedfe8fc4f95202131fb90c5b9 332 SUPERFAMILY SSF51306 85 331 2.2E-78 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Y11_42351 6b1f0caedfe8fc4f95202131fb90c5b9 332 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 266 312 1.6E-17 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Y11_42351 6b1f0caedfe8fc4f95202131fb90c5b9 332 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 72 166 8.8E-25 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Y11_42351 6b1f0caedfe8fc4f95202131fb90c5b9 332 Pfam PF10502 Signal peptidase, peptidase S26 270 310 3.0E-7 T 13-10-2018 IPR019533 Peptidase S26 Y11_42351 6b1f0caedfe8fc4f95202131fb90c5b9 332 ProSitePatterns PS00761 Signal peptidases I signature 3. 277 290 - T 13-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Y11_42351 6b1f0caedfe8fc4f95202131fb90c5b9 332 ProSitePatterns PS00501 Signal peptidases I serine active site. 96 103 - T 13-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 Y11_42351 6b1f0caedfe8fc4f95202131fb90c5b9 332 Gene3D G3DSA:2.170.230.10 162 271 1.1E-74 T 13-10-2018 Y11_42351 6b1f0caedfe8fc4f95202131fb90c5b9 332 ProSitePatterns PS00760 Signal peptidases I lysine active site. 153 165 - T 13-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 Y11_19711 c6c1ef072068b3be27f0c19960b0c812 354 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 328 2.6E-110 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Y11_19711 c6c1ef072068b3be27f0c19960b0c812 354 Gene3D G3DSA:3.30.1490.20 94 155 1.0E-94 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Y11_19711 c6c1ef072068b3be27f0c19960b0c812 354 Gene3D G3DSA:3.40.50.20 1 70 3.7E-31 T 13-10-2018 Y11_19711 c6c1ef072068b3be27f0c19960b0c812 354 SUPERFAMILY SSF56059 79 274 2.6E-56 T 13-10-2018 Y11_19711 c6c1ef072068b3be27f0c19960b0c812 354 SUPERFAMILY SSF51246 278 353 1.18E-18 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Y11_19711 c6c1ef072068b3be27f0c19960b0c812 354 SUPERFAMILY SSF52440 2 74 4.03E-15 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Y11_19711 c6c1ef072068b3be27f0c19960b0c812 354 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 32.694 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Y11_19711 c6c1ef072068b3be27f0c19960b0c812 354 Pfam PF02222 ATP-grasp domain 88 254 1.0E-53 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Y11_19711 c6c1ef072068b3be27f0c19960b0c812 354 Gene3D G3DSA:3.30.470.20 79 320 1.0E-94 T 13-10-2018 Y11_14571 672426aade79c2226f8912852c677fde 349 Gene3D G3DSA:3.40.50.2300 1 133 9.3E-31 T 13-10-2018 Y11_14571 672426aade79c2226f8912852c677fde 349 Gene3D G3DSA:3.40.50.180 148 349 9.4E-85 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal Y11_14571 672426aade79c2226f8912852c677fde 349 SMART SM00448 4 119 2.1E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_14571 672426aade79c2226f8912852c677fde 349 SUPERFAMILY SSF52738 156 343 1.7E-76 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal Y11_14571 672426aade79c2226f8912852c677fde 349 Pfam PF00072 Response regulator receiver domain 6 109 3.8E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_14571 672426aade79c2226f8912852c677fde 349 Pfam PF01339 CheB methylesterase 159 336 2.7E-63 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Y11_14571 672426aade79c2226f8912852c677fde 349 SUPERFAMILY SSF52172 1 108 1.99E-27 T 13-10-2018 IPR011006 CheY-like superfamily Y11_14571 672426aade79c2226f8912852c677fde 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 41.415 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Y11_14571 672426aade79c2226f8912852c677fde 349 PIRSF PIRSF000876 1 346 2.3E-139 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Y11_20091 ce84a22f40d2454daf5a85c2b7d805f1 178 Pfam PF07445 Primosomal replication protein priC 9 175 6.3E-53 T 13-10-2018 IPR010890 Primosomal replication PriB/PriC Y11_20091 ce84a22f40d2454daf5a85c2b7d805f1 178 Gene3D G3DSA:1.20.1270.340 1 98 2.1E-33 T 13-10-2018 IPR038338 PriB/PriC superfamily Y11_14461 9303b40d844d5fa86cb891f4a0bf46e7 99 SUPERFAMILY SSF101498 2 91 4.97E-13 T 13-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily Y11_14461 9303b40d844d5fa86cb891f4a0bf46e7 99 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 90 2.5E-10 T 13-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal Y11_14461 9303b40d844d5fa86cb891f4a0bf46e7 99 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 92 7.4E-19 T 13-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 Y11_28831 f4b31479ef3d9871c804a988ffb02514 334 Pfam PF04748 Divergent polysaccharide deacetylase 28 238 2.0E-78 T 13-10-2018 IPR006837 Divergent polysaccharide deacetylase Y11_28831 f4b31479ef3d9871c804a988ffb02514 334 SUPERFAMILY SSF88713 24 238 1.58E-73 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Y11_28831 f4b31479ef3d9871c804a988ffb02514 334 Gene3D G3DSA:3.20.20.370 23 239 3.5E-76 T 13-10-2018 Y11_12131 8b291a5c5cb42660ddd22293130e1fc6 190 SUPERFAMILY SSF51182 1 187 4.0E-56 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_12131 8b291a5c5cb42660ddd22293130e1fc6 190 Gene3D G3DSA:2.60.120.10 9 115 6.6E-34 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_12131 8b291a5c5cb42660ddd22293130e1fc6 190 Pfam PF05962 HutD 13 166 1.5E-53 T 13-10-2018 IPR010282 Uncharacterised protein family HutD/Ves Y11_21061 0037c3576abfe3ae33e6dddfda8b6664 304 Gene3D G3DSA:3.30.420.40 119 289 7.9E-78 T 13-10-2018 Y11_21061 0037c3576abfe3ae33e6dddfda8b6664 304 ProSitePatterns PS01125 ROK family signature. 130 157 - T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Y11_21061 0037c3576abfe3ae33e6dddfda8b6664 304 Gene3D G3DSA:3.30.420.40 4 296 7.9E-78 T 13-10-2018 Y11_21061 0037c3576abfe3ae33e6dddfda8b6664 304 Pfam PF00480 ROK family 3 300 7.5E-83 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Y11_21061 0037c3576abfe3ae33e6dddfda8b6664 304 SUPERFAMILY SSF53067 2 299 4.45E-58 T 13-10-2018 Y11_36291 3f4b75464bdfc56f443a4f9c474a954f 75 Gene3D G3DSA:4.10.640.10 20 75 1.9E-28 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36291 3f4b75464bdfc56f443a4f9c474a954f 75 Pfam PF01084 Ribosomal protein S18 19 68 4.8E-24 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36291 3f4b75464bdfc56f443a4f9c474a954f 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 13-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36291 3f4b75464bdfc56f443a4f9c474a954f 75 SUPERFAMILY SSF46911 3 74 1.07E-28 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36291 3f4b75464bdfc56f443a4f9c474a954f 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 1.0E-22 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36291 3f4b75464bdfc56f443a4f9c474a954f 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 2.3E-36 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36291 3f4b75464bdfc56f443a4f9c474a954f 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.759 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36291 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-17 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36291 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-17 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36291 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-17 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36291 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-17 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_14931 7231f8fd7488d8a80a579dd0b2dc85f5 247 Gene3D G3DSA:2.60.40.10 47 155 3.7E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_14931 7231f8fd7488d8a80a579dd0b2dc85f5 247 SUPERFAMILY SSF49584 162 240 5.76E-7 T 13-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily Y11_14931 7231f8fd7488d8a80a579dd0b2dc85f5 247 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 47 158 4.4E-18 T 13-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Y11_14931 7231f8fd7488d8a80a579dd0b2dc85f5 247 SUPERFAMILY SSF49354 43 157 3.27E-18 T 13-10-2018 IPR008962 PapD-like superfamily Y11_12451 97922393d9c635e6968723bcdf328c91 186 SUPERFAMILY SSF89155 2 180 2.22E-46 T 13-10-2018 IPR036411 TorD-like superfamily Y11_12451 97922393d9c635e6968723bcdf328c91 186 Pfam PF02613 Nitrate reductase delta subunit 47 147 1.5E-14 T 13-10-2018 IPR020945 DMSO/Nitrate reductase chaperone Y11_12451 97922393d9c635e6968723bcdf328c91 186 Gene3D G3DSA:1.10.3480.10 1 185 3.6E-32 T 13-10-2018 Y11_12451 97922393d9c635e6968723bcdf328c91 186 PIRSF PIRSF004690 1 186 8.2E-63 T 13-10-2018 IPR026269 Tat proofreading chaperone DmsD-type Y11_02901 903f3bdbf3ddecb51336a633ce2664c0 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 13-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site Y11_02901 903f3bdbf3ddecb51336a633ce2664c0 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 1.0E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_02901 903f3bdbf3ddecb51336a633ce2664c0 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 1.0E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_02901 903f3bdbf3ddecb51336a633ce2664c0 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 1.0E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_02901 903f3bdbf3ddecb51336a633ce2664c0 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 1.0E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_02901 903f3bdbf3ddecb51336a633ce2664c0 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 1.0E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_02901 903f3bdbf3ddecb51336a633ce2664c0 478 Gene3D G3DSA:3.20.20.80 1 478 1.2E-163 T 13-10-2018 Y11_02901 903f3bdbf3ddecb51336a633ce2664c0 478 SUPERFAMILY SSF51445 2 471 5.7E-160 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_02901 903f3bdbf3ddecb51336a633ce2664c0 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site Y11_02901 903f3bdbf3ddecb51336a633ce2664c0 478 Pfam PF00232 Glycosyl hydrolase family 1 3 475 3.9E-129 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_38961 f91c12abcf3b48071d9a9059880a39fc 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 5.2E-62 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Y11_38961 f91c12abcf3b48071d9a9059880a39fc 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 2.1E-21 T 13-10-2018 IPR020603 MraZ domain Y11_38961 f91c12abcf3b48071d9a9059880a39fc 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 142 1.5E-20 T 13-10-2018 IPR020603 MraZ domain Y11_38961 f91c12abcf3b48071d9a9059880a39fc 152 Gene3D G3DSA:2.40.330.20 1 150 2.7E-42 T 13-10-2018 IPR038619 MraZ superfamily Y11_38961 f91c12abcf3b48071d9a9059880a39fc 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 141 2.0E-76 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Y11_38961 f91c12abcf3b48071d9a9059880a39fc 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 56.423 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Y11_38961 f91c12abcf3b48071d9a9059880a39fc 152 SUPERFAMILY SSF89447 1 138 6.28E-45 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Y11_p0991 c35fd8432b41ba17e4d07b57de41df04 217 SUPERFAMILY SSF53098 110 212 1.82E-20 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_p0991 c35fd8432b41ba17e4d07b57de41df04 217 Pfam PF00665 Integrase core domain 114 212 7.9E-14 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_p0991 c35fd8432b41ba17e4d07b57de41df04 217 Pfam PF13276 HTH-like domain 41 99 5.5E-7 T 13-10-2018 IPR025948 HTH-like domain Y11_p0991 c35fd8432b41ba17e4d07b57de41df04 217 Gene3D G3DSA:3.30.420.10 112 216 6.2E-10 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_29091 a34cc48a3c45288c7e31df14c28d880e 664 Gene3D G3DSA:3.30.70.270 233 406 2.3E-55 T 13-10-2018 Y11_29091 a34cc48a3c45288c7e31df14c28d880e 664 SMART SM00267 225 394 3.1E-59 T 13-10-2018 IPR000160 GGDEF domain Y11_29091 a34cc48a3c45288c7e31df14c28d880e 664 SUPERFAMILY SSF55785 123 233 2.58E-13 T 13-10-2018 IPR035965 PAS domain superfamily Y11_29091 a34cc48a3c45288c7e31df14c28d880e 664 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 114 232 3.3E-11 T 13-10-2018 IPR000014 PAS domain Y11_29091 a34cc48a3c45288c7e31df14c28d880e 664 SMART SM00052 404 649 1.7E-112 T 13-10-2018 IPR001633 EAL domain Y11_29091 a34cc48a3c45288c7e31df14c28d880e 664 Pfam PF00563 EAL domain 411 644 2.9E-67 T 13-10-2018 IPR001633 EAL domain Y11_29091 a34cc48a3c45288c7e31df14c28d880e 664 Gene3D G3DSA:3.20.20.450 407 660 2.7E-92 T 13-10-2018 IPR035919 EAL domain superfamily Y11_29091 a34cc48a3c45288c7e31df14c28d880e 664 SUPERFAMILY SSF55073 242 396 1.02E-43 T 13-10-2018 IPR029787 Nucleotide cyclase Y11_29091 a34cc48a3c45288c7e31df14c28d880e 664 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 392 7.3E-37 T 13-10-2018 IPR000160 GGDEF domain Y11_29091 a34cc48a3c45288c7e31df14c28d880e 664 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 389 9.9E-44 T 13-10-2018 IPR000160 GGDEF domain Y11_29091 a34cc48a3c45288c7e31df14c28d880e 664 SUPERFAMILY SSF141868 411 657 7.72E-86 T 13-10-2018 IPR035919 EAL domain superfamily Y11_29091 a34cc48a3c45288c7e31df14c28d880e 664 Gene3D G3DSA:3.30.450.20 116 232 3.1E-13 T 13-10-2018 Y11_29091 a34cc48a3c45288c7e31df14c28d880e 664 SMART SM00091 110 176 2.6E-4 T 13-10-2018 IPR000014 PAS domain Y11_29091 a34cc48a3c45288c7e31df14c28d880e 664 Pfam PF13426 PAS domain 122 224 1.4E-7 T 13-10-2018 IPR000014 PAS domain Y11_01651 c31e713addab22497b8e7bed74527a39 359 Pfam PF03600 Citrate transporter 12 300 2.2E-23 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Y11_24951 a0920124223931e59dcea0894639c258 212 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 1.9E-80 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Y11_24951 a0920124223931e59dcea0894639c258 212 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 212 40.902 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Y11_24951 a0920124223931e59dcea0894639c258 212 Gene3D G3DSA:3.90.870.10 1 212 1.1E-95 T 13-10-2018 Y11_24951 a0920124223931e59dcea0894639c258 212 SUPERFAMILY SSF55821 7 210 2.29E-85 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Y11_24951 a0920124223931e59dcea0894639c258 212 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 2.2E-82 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Y11_24801 6a9a7f54d51f31c47320d6c2e177760a 243 SMART SM00563 67 182 1.7E-39 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Y11_24801 6a9a7f54d51f31c47320d6c2e177760a 243 SUPERFAMILY SSF69593 2 238 8.89E-63 T 13-10-2018 Y11_24801 6a9a7f54d51f31c47320d6c2e177760a 243 Pfam PF01553 Acyltransferase 64 180 5.1E-32 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Y11_24801 6a9a7f54d51f31c47320d6c2e177760a 243 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 3.0E-47 T 13-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 Y11_30391 ebde22e4179705b9464a9166957829b6 493 SMART SM00345 13 72 3.9E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_30391 ebde22e4179705b9464a9166957829b6 493 Gene3D G3DSA:3.90.1150.10 96 467 2.4E-91 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_30391 ebde22e4179705b9464a9166957829b6 493 Gene3D G3DSA:3.40.640.10 144 362 2.4E-91 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_30391 ebde22e4179705b9464a9166957829b6 493 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 1.3E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_30391 ebde22e4179705b9464a9166957829b6 493 SUPERFAMILY SSF53383 99 467 4.41E-81 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_30391 ebde22e4179705b9464a9166957829b6 493 Pfam PF00155 Aminotransferase class I and II 140 449 5.0E-24 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_30391 ebde22e4179705b9464a9166957829b6 493 Gene3D G3DSA:1.10.10.10 5 74 5.6E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_30391 ebde22e4179705b9464a9166957829b6 493 SUPERFAMILY SSF46785 9 76 4.54E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_18691 77da284ef8e250867b974174d5332c3a 245 Pfam PF03746 LamB/YcsF family 3 235 8.9E-94 T 13-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Y11_18691 77da284ef8e250867b974174d5332c3a 245 Gene3D G3DSA:3.20.20.370 1 245 5.1E-101 T 13-10-2018 Y11_18691 77da284ef8e250867b974174d5332c3a 245 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 43.009 T 13-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Y11_18691 77da284ef8e250867b974174d5332c3a 245 SUPERFAMILY SSF88713 1 243 6.0E-93 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Y11_04761 cb76baf799ea5e40903aab05fb6a2cd0 121 Pfam PF07784 Protein of unknown function (DUF1622) 42 104 1.7E-24 T 13-10-2018 IPR012427 Protein of unknown function DUF1622 Y11_12181 7d0eae1de2229dad147aa8afd884e188 86 Pfam PF13518 Helix-turn-helix domain 16 55 2.0E-6 T 13-10-2018 Y11_12181 7d0eae1de2229dad147aa8afd884e188 86 SUPERFAMILY SSF48295 4 62 6.28E-14 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Y11_29481 7d0eae1de2229dad147aa8afd884e188 86 Pfam PF13518 Helix-turn-helix domain 16 55 2.0E-6 T 13-10-2018 Y11_29481 7d0eae1de2229dad147aa8afd884e188 86 SUPERFAMILY SSF48295 4 62 6.28E-14 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Y11_34801 7d0eae1de2229dad147aa8afd884e188 86 Pfam PF13518 Helix-turn-helix domain 16 55 2.0E-6 T 13-10-2018 Y11_34801 7d0eae1de2229dad147aa8afd884e188 86 SUPERFAMILY SSF48295 4 62 6.28E-14 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Y11_00851 ce57f1d7dc32626699b0f239324e5ae0 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 1.5E-30 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Y11_00851 ce57f1d7dc32626699b0f239324e5ae0 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 1.5E-30 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Y11_00851 ce57f1d7dc32626699b0f239324e5ae0 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 1.5E-30 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Y11_00851 ce57f1d7dc32626699b0f239324e5ae0 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 1.5E-30 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Y11_00851 ce57f1d7dc32626699b0f239324e5ae0 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 1.5E-30 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Y11_00851 ce57f1d7dc32626699b0f239324e5ae0 409 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 19 377 2.8E-96 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Y11_00851 ce57f1d7dc32626699b0f239324e5ae0 409 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 409 36.795 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Y11_00851 ce57f1d7dc32626699b0f239324e5ae0 409 Pfam PF01566 Natural resistance-associated macrophage protein 38 384 1.9E-122 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Y11_29901 a2ed0fdde4d1ea28a79baac8757630d0 442 Pfam PF00860 Permease family 29 402 2.8E-44 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Y11_29901 a2ed0fdde4d1ea28a79baac8757630d0 442 PIRSF PIRSF005353 3 442 2.2E-178 T 13-10-2018 IPR026033 Purine permease PbuG-like Y11_01091 e3eebf6cd48e3dc5d9f04cfa791649a6 447 Gene3D G3DSA:1.20.1740.10 6 436 1.6E-74 T 13-10-2018 Y11_01091 e3eebf6cd48e3dc5d9f04cfa791649a6 447 Pfam PF00324 Amino acid permease 18 367 6.4E-36 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Y11_01091 e3eebf6cd48e3dc5d9f04cfa791649a6 447 PIRSF PIRSF006060 3 442 5.3E-66 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_22981 d41c8959ae5ec01dbc0a307b7d5fe6ce 174 Gene3D G3DSA:2.60.40.200 20 174 5.3E-55 T 13-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Y11_22981 d41c8959ae5ec01dbc0a307b7d5fe6ce 174 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 162 173 - T 13-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Y11_22981 d41c8959ae5ec01dbc0a307b7d5fe6ce 174 SUPERFAMILY SSF49329 23 174 1.31E-49 T 13-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Y11_22981 d41c8959ae5ec01dbc0a307b7d5fe6ce 174 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 33 173 2.0E-31 T 13-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Y11_22981 d41c8959ae5ec01dbc0a307b7d5fe6ce 174 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 65 75 - T 13-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Y11_02641 6c228e65fe6fd0c147aa459b7eb40141 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 743 789 7.9E-15 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Y11_02641 6c228e65fe6fd0c147aa459b7eb40141 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 1.9E-13 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Y11_02641 6c228e65fe6fd0c147aa459b7eb40141 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 5.7E-11 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Y11_02641 6c228e65fe6fd0c147aa459b7eb40141 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 1.2E-8 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Y11_02641 6c228e65fe6fd0c147aa459b7eb40141 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 737 1.7E-15 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Y11_02641 6c228e65fe6fd0c147aa459b7eb40141 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 2.4E-10 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Y11_02641 6c228e65fe6fd0c147aa459b7eb40141 885 Gene3D G3DSA:3.30.1360.40 236 333 8.9E-234 T 13-10-2018 Y11_02641 6c228e65fe6fd0c147aa459b7eb40141 885 Gene3D G3DSA:2.120.10.90 535 841 3.5E-132 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Y11_02641 6c228e65fe6fd0c147aa459b7eb40141 885 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 841 24.728 T 13-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Y11_02641 6c228e65fe6fd0c147aa459b7eb40141 885 SMART SM00434 11 499 9.3E-299 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Y11_02641 6c228e65fe6fd0c147aa459b7eb40141 885 Gene3D G3DSA:1.10.268.10 370 493 8.9E-234 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Y11_02641 6c228e65fe6fd0c147aa459b7eb40141 885 SUPERFAMILY SSF101904 533 848 5.49E-115 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Y11_02641 6c228e65fe6fd0c147aa459b7eb40141 885 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 13-10-2018 Y11_02641 6c228e65fe6fd0c147aa459b7eb40141 885 SUPERFAMILY SSF56719 30 521 5.62E-182 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Y11_02641 6c228e65fe6fd0c147aa459b7eb40141 885 Gene3D G3DSA:3.90.199.10 33 521 8.9E-234 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Y11_02641 6c228e65fe6fd0c147aa459b7eb40141 885 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 2.5E-152 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Y11_07941 9a5e8fef709d388e7bb478350b6f5dfb 164 Pfam PF10697 Protein of unknown function (DUF2502) 23 101 2.9E-30 T 13-10-2018 IPR019638 Protein of unknown function DUF2502 Y11_p0921 2dc55f2743e0d3dcc780b3468cf0f5d9 71 Pfam PF00872 Transposase, Mutator family 2 44 6.4E-7 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Y11_20701 3daca3ec3d1123847b65db5af65d5c82 483 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 374 1.9E-130 T 13-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 Y11_20701 3daca3ec3d1123847b65db5af65d5c82 483 SUPERFAMILY SSF52402 175 373 7.06E-42 T 13-10-2018 Y11_20701 3daca3ec3d1123847b65db5af65d5c82 483 SUPERFAMILY SSF143437 1 174 2.27E-47 T 13-10-2018 Y11_20701 3daca3ec3d1123847b65db5af65d5c82 483 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 384 483 8.7E-43 T 13-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 Y11_20701 3daca3ec3d1123847b65db5af65d5c82 483 Gene3D G3DSA:3.30.2130.30 1 175 2.1E-35 T 13-10-2018 Y11_20701 3daca3ec3d1123847b65db5af65d5c82 483 SMART SM00981 76 166 4.3E-23 T 13-10-2018 IPR004114 THUMP domain GO:0003723 Y11_20701 3daca3ec3d1123847b65db5af65d5c82 483 SUPERFAMILY SSF52821 392 482 1.83E-11 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Y11_20701 3daca3ec3d1123847b65db5af65d5c82 483 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 176 370 1.7E-79 T 13-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 Y11_20701 3daca3ec3d1123847b65db5af65d5c82 483 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 483 230.569 T 13-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 Y11_20701 3daca3ec3d1123847b65db5af65d5c82 483 Pfam PF02926 THUMP domain 30 162 9.5E-24 T 13-10-2018 IPR004114 THUMP domain GO:0003723 Y11_20701 3daca3ec3d1123847b65db5af65d5c82 483 Gene3D G3DSA:3.40.250.10 398 483 2.6E-9 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Y11_20701 3daca3ec3d1123847b65db5af65d5c82 483 Gene3D G3DSA:3.40.50.620 176 397 2.6E-53 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_34591 07a3930462750c6ab5b6e40f907d2e80 265 Gene3D G3DSA:3.90.190.10 13 264 3.4E-55 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like Y11_34591 07a3930462750c6ab5b6e40f907d2e80 265 SUPERFAMILY SSF52799 12 264 2.94E-47 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like Y11_34591 07a3930462750c6ab5b6e40f907d2e80 265 Pfam PF13350 Tyrosine phosphatase family 13 265 1.1E-59 T 13-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type Y11_36721 ad6a8cdbdefee861c2a9a72cddd5da9c 136 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 116 25.808 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Y11_36721 ad6a8cdbdefee861c2a9a72cddd5da9c 136 SUPERFAMILY SSF89919 2 110 2.88E-31 T 13-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Y11_36721 ad6a8cdbdefee861c2a9a72cddd5da9c 136 Pfam PF02033 Ribosome-binding factor A 7 115 3.9E-30 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Y11_36721 ad6a8cdbdefee861c2a9a72cddd5da9c 136 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 121 1.0E-40 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Y11_36721 ad6a8cdbdefee861c2a9a72cddd5da9c 136 Gene3D G3DSA:3.30.300.20 1 111 5.3E-38 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Y11_36721 ad6a8cdbdefee861c2a9a72cddd5da9c 136 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 103 2.0E-49 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Y11_36721 ad6a8cdbdefee861c2a9a72cddd5da9c 136 ProSitePatterns PS01319 Ribosome-binding factor A signature. 82 103 - T 13-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 Y11_17081 d222b1560f5425ed7bfd191b376997e3 195 SUPERFAMILY SSF54862 18 119 3.26E-24 T 13-10-2018 Y11_17081 d222b1560f5425ed7bfd191b376997e3 195 Pfam PF12838 4Fe-4S dicluster domain 39 89 1.0E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_17081 d222b1560f5425ed7bfd191b376997e3 195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_17081 d222b1560f5425ed7bfd191b376997e3 195 Gene3D G3DSA:3.30.70.3270 18 160 1.1E-25 T 13-10-2018 Y11_17081 d222b1560f5425ed7bfd191b376997e3 195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_05151 0b393167ac70522a5fab1493f7a0e867 381 SUPERFAMILY SSF51905 10 379 1.13E-46 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_05151 0b393167ac70522a5fab1493f7a0e867 381 Gene3D G3DSA:3.50.50.60 12 375 9.0E-131 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_05151 0b393167ac70522a5fab1493f7a0e867 381 Pfam PF01266 FAD dependent oxidoreductase 12 358 3.8E-47 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Y11_05151 0b393167ac70522a5fab1493f7a0e867 381 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 9 379 76.126 T 13-10-2018 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 Y11_05151 0b393167ac70522a5fab1493f7a0e867 381 Gene3D G3DSA:3.30.9.10 67 321 9.0E-131 T 13-10-2018 Y11_05151 0b393167ac70522a5fab1493f7a0e867 381 SUPERFAMILY SSF54373 221 321 7.45E-20 T 13-10-2018 Y11_29171 9d81fd9224608d94be482c82d7c09384 700 Pfam PF13328 HD domain 26 175 4.1E-53 T 13-10-2018 IPR003607 HD/PDEase domain Y11_29171 9d81fd9224608d94be482c82d7c09384 700 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 696 2.0E-286 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 Y11_29171 9d81fd9224608d94be482c82d7c09384 700 Pfam PF02824 TGS domain 388 447 1.2E-20 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Y11_29171 9d81fd9224608d94be482c82d7c09384 700 Gene3D G3DSA:1.10.3210.10 3 190 1.0E-80 T 13-10-2018 Y11_29171 9d81fd9224608d94be482c82d7c09384 700 SUPERFAMILY SSF109604 3 190 2.39E-75 T 13-10-2018 Y11_29171 9d81fd9224608d94be482c82d7c09384 700 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.1E-35 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 Y11_29171 9d81fd9224608d94be482c82d7c09384 700 Pfam PF13291 ACT domain 620 697 1.4E-15 T 13-10-2018 IPR002912 ACT domain Y11_29171 9d81fd9224608d94be482c82d7c09384 700 SUPERFAMILY SSF81271 375 447 6.32E-21 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Y11_29171 9d81fd9224608d94be482c82d7c09384 700 Gene3D G3DSA:3.30.460.10 193 325 5.7E-48 T 13-10-2018 Y11_29171 9d81fd9224608d94be482c82d7c09384 700 Gene3D G3DSA:3.30.70.260 621 700 2.3E-13 T 13-10-2018 Y11_29171 9d81fd9224608d94be482c82d7c09384 700 SUPERFAMILY SSF55021 627 697 3.41E-5 T 13-10-2018 Y11_29171 9d81fd9224608d94be482c82d7c09384 700 SMART SM00471 41 153 1.3E-11 T 13-10-2018 IPR003607 HD/PDEase domain Y11_29171 9d81fd9224608d94be482c82d7c09384 700 SUPERFAMILY SSF81301 180 392 4.41E-62 T 13-10-2018 Y11_29171 9d81fd9224608d94be482c82d7c09384 700 SMART SM00954 235 345 3.0E-62 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 Y11_29171 9d81fd9224608d94be482c82d7c09384 700 Gene3D G3DSA:3.10.20.30 381 455 1.2E-29 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Y11_20971 f791300c3b5df9511fa9dbc9cb4e1450 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.3E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_20971 f791300c3b5df9511fa9dbc9cb4e1450 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.3E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_20971 f791300c3b5df9511fa9dbc9cb4e1450 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 2.3E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_20971 f791300c3b5df9511fa9dbc9cb4e1450 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 2.3E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_20971 f791300c3b5df9511fa9dbc9cb4e1450 226 SUPERFAMILY SSF51735 7 226 4.32E-62 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_20971 f791300c3b5df9511fa9dbc9cb4e1450 226 Gene3D G3DSA:3.40.50.720 1 226 2.3E-52 T 13-10-2018 Y11_20971 f791300c3b5df9511fa9dbc9cb4e1450 226 Pfam PF00106 short chain dehydrogenase 8 187 5.7E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_36981 389608882c9f860de0e9474bdd2d93e2 150 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 9 146 34.856 T 13-10-2018 IPR011194 Uncharacterised protein family UPF0306 Y11_36981 389608882c9f860de0e9474bdd2d93e2 150 PIRSF PIRSF009554 6 150 1.1E-61 T 13-10-2018 IPR011194 Uncharacterised protein family UPF0306 Y11_36981 389608882c9f860de0e9474bdd2d93e2 150 Gene3D G3DSA:2.30.110.10 2 146 6.3E-9 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Y11_36981 389608882c9f860de0e9474bdd2d93e2 150 SUPERFAMILY SSF50475 13 146 3.02E-13 T 13-10-2018 Y11_02011 8342f1f858d23bfbd9448a8503b851f1 147 SUPERFAMILY SSF55804 1 145 3.53E-40 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Y11_02011 8342f1f858d23bfbd9448a8503b851f1 147 Gene3D G3DSA:3.40.930.10 1 147 8.0E-59 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Y11_02011 8342f1f858d23bfbd9448a8503b851f1 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 3.6E-37 T 13-10-2018 IPR002178 PTS EIIA type-2 domain Y11_17361 a73a74cf598a1e4d457e98209bde3778 523 Gene3D G3DSA:3.40.50.300 274 522 1.0E-55 T 13-10-2018 Y11_17361 a73a74cf598a1e4d457e98209bde3778 523 Gene3D G3DSA:3.40.50.300 2 271 4.3E-55 T 13-10-2018 Y11_17361 a73a74cf598a1e4d457e98209bde3778 523 Pfam PF00005 ABC transporter 10 176 7.8E-18 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_17361 a73a74cf598a1e4d457e98209bde3778 523 SUPERFAMILY SSF52540 2 229 2.44E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_17361 a73a74cf598a1e4d457e98209bde3778 523 SMART SM00382 336 505 6.8E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_17361 a73a74cf598a1e4d457e98209bde3778 523 SMART SM00382 18 220 2.6E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_17361 a73a74cf598a1e4d457e98209bde3778 523 SUPERFAMILY SSF52540 290 515 3.66E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_17361 a73a74cf598a1e4d457e98209bde3778 523 Pfam PF00005 ABC transporter 328 459 4.7E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_17361 a73a74cf598a1e4d457e98209bde3778 523 Pfam PF12848 ABC transporter 216 301 4.1E-20 T 13-10-2018 IPR032781 ABC-transporter extension domain Y11_06121 72d00bc54b97024499d63b9c3c533754 47 Hamap MF_01596 PhoP/PhoQ regulator MgrB [mgrB]. 1 47 18.696 T 13-10-2018 IPR020907 PhoP/PhoQ regulator MgrB Y11_06121 72d00bc54b97024499d63b9c3c533754 47 Pfam PF13998 MgrB protein 19 47 7.5E-18 T 13-10-2018 IPR020907 PhoP/PhoQ regulator MgrB Y11_14241 40e042e3f0ba4a855ebdf3c20d840b35 148 PIRSF PIRSF019404 1 148 1.1E-50 T 13-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 Y11_14241 40e042e3f0ba4a855ebdf3c20d840b35 148 PRINTS PR01004 Flagellar FliJ protein signature 126 146 4.8E-43 T 13-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 Y11_14241 40e042e3f0ba4a855ebdf3c20d840b35 148 PRINTS PR01004 Flagellar FliJ protein signature 86 107 4.8E-43 T 13-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 Y11_14241 40e042e3f0ba4a855ebdf3c20d840b35 148 PRINTS PR01004 Flagellar FliJ protein signature 108 126 4.8E-43 T 13-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 Y11_14241 40e042e3f0ba4a855ebdf3c20d840b35 148 PRINTS PR01004 Flagellar FliJ protein signature 44 61 4.8E-43 T 13-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 Y11_14241 40e042e3f0ba4a855ebdf3c20d840b35 148 PRINTS PR01004 Flagellar FliJ protein signature 27 43 4.8E-43 T 13-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 Y11_14241 40e042e3f0ba4a855ebdf3c20d840b35 148 PRINTS PR01004 Flagellar FliJ protein signature 63 84 4.8E-43 T 13-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 Y11_14241 40e042e3f0ba4a855ebdf3c20d840b35 148 PRINTS PR01004 Flagellar FliJ protein signature 4 26 4.8E-43 T 13-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 Y11_14241 40e042e3f0ba4a855ebdf3c20d840b35 148 Pfam PF02050 Flagellar FliJ protein 19 141 6.9E-36 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Y11_14241 40e042e3f0ba4a855ebdf3c20d840b35 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 143 3.5E-35 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Y11_30271 f33b1d3f887e7a686f19eb936ae5b9fe 729 SUPERFAMILY SSF55729 598 727 3.54E-5 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_30271 f33b1d3f887e7a686f19eb936ae5b9fe 729 SUPERFAMILY SSF49695 42 128 8.0E-11 T 13-10-2018 IPR011024 Gamma-crystallin-like Y11_30271 f33b1d3f887e7a686f19eb936ae5b9fe 729 Gene3D G3DSA:2.60.20.10 32 128 3.9E-21 T 13-10-2018 Y11_30271 f33b1d3f887e7a686f19eb936ae5b9fe 729 Pfam PF08964 Beta/Gamma crystallin 43 97 7.4E-7 T 13-10-2018 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal GO:0016020|GO:0098609 Y11_15401 bd5e141cc5b976d9cf0c327500598297 209 SUPERFAMILY SSF52172 1 125 2.42E-29 T 13-10-2018 IPR011006 CheY-like superfamily Y11_15401 bd5e141cc5b976d9cf0c327500598297 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 4.8E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_15401 bd5e141cc5b976d9cf0c327500598297 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 4.8E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_15401 bd5e141cc5b976d9cf0c327500598297 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 4.8E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_15401 bd5e141cc5b976d9cf0c327500598297 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_15401 bd5e141cc5b976d9cf0c327500598297 209 SMART SM00448 2 115 3.2E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_15401 bd5e141cc5b976d9cf0c327500598297 209 Pfam PF00072 Response regulator receiver domain 4 115 4.2E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_15401 bd5e141cc5b976d9cf0c327500598297 209 SUPERFAMILY SSF46894 130 206 4.76E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_15401 bd5e141cc5b976d9cf0c327500598297 209 Gene3D G3DSA:3.40.50.12740 2 206 1.2E-57 T 13-10-2018 Y11_15401 bd5e141cc5b976d9cf0c327500598297 209 SMART SM00421 143 200 6.2E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_15401 bd5e141cc5b976d9cf0c327500598297 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 2.8E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_19411 baca8b1fad687dfc4c5f2046c9267e91 590 Pfam PF00664 ABC transporter transmembrane region 26 300 9.9E-36 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Y11_19411 baca8b1fad687dfc4c5f2046c9267e91 590 SMART SM00382 371 557 1.0E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_19411 baca8b1fad687dfc4c5f2046c9267e91 590 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_19411 baca8b1fad687dfc4c5f2046c9267e91 590 Pfam PF00005 ABC transporter 362 511 3.6E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_19411 baca8b1fad687dfc4c5f2046c9267e91 590 SUPERFAMILY SSF90123 10 324 1.19E-56 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_19411 baca8b1fad687dfc4c5f2046c9267e91 590 Gene3D G3DSA:1.20.1560.10 13 336 4.9E-110 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_19411 baca8b1fad687dfc4c5f2046c9267e91 590 Gene3D G3DSA:3.40.50.300 337 589 2.3E-95 T 13-10-2018 Y11_19411 baca8b1fad687dfc4c5f2046c9267e91 590 SUPERFAMILY SSF52540 335 582 1.48E-92 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_33711 9b5d1bcec95bf97073e60fc21bff9eff 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 7.4E-99 T 13-10-2018 IPR016040 NAD(P)-binding domain Y11_33711 9b5d1bcec95bf97073e60fc21bff9eff 355 Gene3D G3DSA:3.40.50.720 3 326 2.2E-139 T 13-10-2018 Y11_33711 9b5d1bcec95bf97073e60fc21bff9eff 355 Gene3D G3DSA:3.90.25.10 202 334 2.2E-139 T 13-10-2018 Y11_33711 9b5d1bcec95bf97073e60fc21bff9eff 355 SUPERFAMILY SSF51735 2 339 3.8E-95 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_33711 9b5d1bcec95bf97073e60fc21bff9eff 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 340 1.0E-159 T 13-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Y11_43171 840fcddd03dced26d2ac28c94e0a89a2 321 SUPERFAMILY SSF54631 262 318 1.87E-7 T 13-10-2018 Y11_43171 840fcddd03dced26d2ac28c94e0a89a2 321 SUPERFAMILY SSF53697 7 256 2.16E-54 T 13-10-2018 Y11_43171 840fcddd03dced26d2ac28c94e0a89a2 321 SMART SM00116 272 320 0.64 T 13-10-2018 IPR000644 CBS domain Y11_43171 840fcddd03dced26d2ac28c94e0a89a2 321 SMART SM00116 208 256 0.15 T 13-10-2018 IPR000644 CBS domain Y11_43171 840fcddd03dced26d2ac28c94e0a89a2 321 PIRSF PIRSF004692 1 321 5.0E-118 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Y11_43171 840fcddd03dced26d2ac28c94e0a89a2 321 Gene3D G3DSA:3.40.50.10490 2 193 1.5E-58 T 13-10-2018 Y11_43171 840fcddd03dced26d2ac28c94e0a89a2 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 43 311 1.7E-113 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Y11_43171 840fcddd03dced26d2ac28c94e0a89a2 321 Gene3D G3DSA:3.10.580.10 194 318 1.7E-32 T 13-10-2018 Y11_43171 840fcddd03dced26d2ac28c94e0a89a2 321 Pfam PF01380 SIS domain 38 169 1.3E-30 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_43171 840fcddd03dced26d2ac28c94e0a89a2 321 Pfam PF00571 CBS domain 199 256 1.9E-6 T 13-10-2018 IPR000644 CBS domain Y11_43171 840fcddd03dced26d2ac28c94e0a89a2 321 Pfam PF00571 CBS domain 275 315 1.8E-5 T 13-10-2018 IPR000644 CBS domain Y11_13701 5de1c48ec7643a9ef38fd0ca85f66aef 99 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 73 91 - T 13-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 Y11_13701 5de1c48ec7643a9ef38fd0ca85f66aef 99 TIGRFAM TIGR03610 RutC: pyrimidine utilization protein C 1 97 1.3E-55 T 13-10-2018 IPR019898 Putative aminoacrylate peracid reductase RutC Y11_13701 5de1c48ec7643a9ef38fd0ca85f66aef 99 Pfam PF01042 Endoribonuclease L-PSP 1 96 5.7E-24 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Y11_13701 5de1c48ec7643a9ef38fd0ca85f66aef 99 Gene3D G3DSA:3.30.1330.40 1 97 3.6E-29 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Y11_13701 5de1c48ec7643a9ef38fd0ca85f66aef 99 SUPERFAMILY SSF55298 1 98 5.5E-27 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Y11_38991 2275d930c636b8813fb0a4fd06dcb1a9 587 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 18 569 46.08 T 13-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_38991 2275d930c636b8813fb0a4fd06dcb1a9 587 Gene3D G3DSA:3.90.1310.30 58 234 1.7E-44 T 13-10-2018 Y11_38991 2275d930c636b8813fb0a4fd06dcb1a9 587 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 219 1.1E-18 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Y11_38991 2275d930c636b8813fb0a4fd06dcb1a9 587 Gene3D G3DSA:3.40.710.10 295 475 3.6E-111 T 13-10-2018 Y11_38991 2275d930c636b8813fb0a4fd06dcb1a9 587 SUPERFAMILY SSF56519 62 233 9.03E-45 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Y11_38991 2275d930c636b8813fb0a4fd06dcb1a9 587 Pfam PF00905 Penicillin binding protein transpeptidase domain 259 553 1.6E-81 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Y11_38991 2275d930c636b8813fb0a4fd06dcb1a9 587 SUPERFAMILY SSF56601 234 562 9.98E-86 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_38991 2275d930c636b8813fb0a4fd06dcb1a9 587 Gene3D G3DSA:3.30.450.330 236 549 3.6E-111 T 13-10-2018 Y11_15101 ac89ca7c26982cc6f51bb091580e6621 431 SUPERFAMILY SSF50494 16 169 1.19E-12 T 13-10-2018 IPR009003 Peptidase S1, PA clan Y11_15101 ac89ca7c26982cc6f51bb091580e6621 431 Gene3D G3DSA:2.40.10.10 90 179 7.7E-7 T 13-10-2018 Y11_15101 ac89ca7c26982cc6f51bb091580e6621 431 Pfam PF00089 Trypsin 27 167 8.0E-5 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Y11_15101 ac89ca7c26982cc6f51bb091580e6621 431 Gene3D G3DSA:2.40.10.10 12 89 7.7E-7 T 13-10-2018 Y11_12271 be26a8620a360dafe7337afaf73d3497 438 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 289 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Y11_12271 be26a8620a360dafe7337afaf73d3497 438 Pfam PF00202 Aminotransferase class-III 48 426 1.5E-125 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Y11_12271 be26a8620a360dafe7337afaf73d3497 438 PIRSF PIRSF000521 203 432 1.0E-38 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Y11_12271 be26a8620a360dafe7337afaf73d3497 438 PIRSF PIRSF000521 47 188 4.1E-7 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Y11_12271 be26a8620a360dafe7337afaf73d3497 438 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 39 432 69.584 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Y11_12271 be26a8620a360dafe7337afaf73d3497 438 Gene3D G3DSA:3.40.640.10 83 334 1.4E-152 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_12271 be26a8620a360dafe7337afaf73d3497 438 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 39 426 1.9E-155 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Y11_12271 be26a8620a360dafe7337afaf73d3497 438 Hamap MF_01173 Succinylornithine transaminase [astC]. 27 438 74.178 T 13-10-2018 IPR026330 Succinylornithine transaminase GO:0006527|GO:0006593|GO:0043825 KEGG: 00330+2.6.1.81 Y11_12271 be26a8620a360dafe7337afaf73d3497 438 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 31 433 3.1E-223 T 13-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 Y11_12271 be26a8620a360dafe7337afaf73d3497 438 Gene3D G3DSA:3.90.1150.10 48 422 1.4E-152 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_12271 be26a8620a360dafe7337afaf73d3497 438 SUPERFAMILY SSF53383 40 426 3.13E-124 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_10361 cc9f267fa010afdee1e85375b419139e 773 Gene3D G3DSA:3.40.228.10 185 412 4.4E-72 T 13-10-2018 Y11_10361 cc9f267fa010afdee1e85375b419139e 773 Gene3D G3DSA:3.40.50.740 120 521 4.4E-72 T 13-10-2018 Y11_10361 cc9f267fa010afdee1e85375b419139e 773 Pfam PF01568 Molydopterin dinucleotide binding domain 650 757 4.0E-11 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Y11_10361 cc9f267fa010afdee1e85375b419139e 773 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 762 4.2E-285 T 13-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 Y11_10361 cc9f267fa010afdee1e85375b419139e 773 SUPERFAMILY SSF53706 48 635 8.11E-143 T 13-10-2018 Y11_10361 cc9f267fa010afdee1e85375b419139e 773 PIRSF PIRSF000144 1 768 0.0 T 13-10-2018 Y11_10361 cc9f267fa010afdee1e85375b419139e 773 SUPERFAMILY SSF50692 644 766 2.26E-19 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Y11_10361 cc9f267fa010afdee1e85375b419139e 773 Gene3D G3DSA:2.40.40.20 649 763 5.5E-6 T 13-10-2018 Y11_10361 cc9f267fa010afdee1e85375b419139e 773 Pfam PF00384 Molybdopterin oxidoreductase 109 498 4.1E-24 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_39001 de3afbddd2b3ba915489d61646c08b56 496 Pfam PF08245 Mur ligase middle domain 114 318 2.4E-51 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Y11_39001 de3afbddd2b3ba915489d61646c08b56 496 Gene3D G3DSA:3.40.1390.10 2 104 9.0E-34 T 13-10-2018 Y11_39001 de3afbddd2b3ba915489d61646c08b56 496 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 34.6 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Y11_39001 de3afbddd2b3ba915489d61646c08b56 496 Pfam PF01225 Mur ligase family, catalytic domain 25 102 4.5E-13 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Y11_39001 de3afbddd2b3ba915489d61646c08b56 496 Gene3D G3DSA:3.40.1190.10 105 341 7.3E-89 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Y11_39001 de3afbddd2b3ba915489d61646c08b56 496 Gene3D G3DSA:3.90.190.20 342 493 3.5E-55 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Y11_39001 de3afbddd2b3ba915489d61646c08b56 496 SUPERFAMILY SSF63418 5 103 2.35E-24 T 13-10-2018 IPR035911 MurE/MurF, N-terminal Y11_39001 de3afbddd2b3ba915489d61646c08b56 496 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 424 6.9E-25 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Y11_39001 de3afbddd2b3ba915489d61646c08b56 496 SUPERFAMILY SSF53244 339 492 2.14E-50 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Y11_39001 de3afbddd2b3ba915489d61646c08b56 496 SUPERFAMILY SSF53623 105 338 3.14E-77 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Y11_39001 de3afbddd2b3ba915489d61646c08b56 496 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 491 4.7E-166 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Y11_39051 17d32366debe361df2997875b2952371 355 SUPERFAMILY SSF53756 6 352 1.75E-127 T 13-10-2018 Y11_39051 17d32366debe361df2997875b2952371 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 343 5.1E-36 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Y11_39051 17d32366debe361df2997875b2952371 355 Gene3D G3DSA:3.40.50.2000 162 320 2.1E-123 T 13-10-2018 Y11_39051 17d32366debe361df2997875b2952371 355 Gene3D G3DSA:3.40.50.2000 9 161 2.1E-123 T 13-10-2018 Y11_39051 17d32366debe361df2997875b2952371 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 1.0E-47 T 13-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_39051 17d32366debe361df2997875b2952371 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 1.0E-112 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_39051 17d32366debe361df2997875b2952371 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 354 35.488 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_18441 f7f606b2031cdb9d7375548a4284b96b 353 Pfam PF02445 Quinolinate synthetase A protein 31 339 1.6E-102 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Y11_18441 f7f606b2031cdb9d7375548a4284b96b 353 Gene3D G3DSA:3.40.50.10800 115 339 3.5E-94 T 13-10-2018 Y11_18441 f7f606b2031cdb9d7375548a4284b96b 353 Gene3D G3DSA:3.40.50.10800 31 322 3.5E-94 T 13-10-2018 Y11_18441 f7f606b2031cdb9d7375548a4284b96b 353 Gene3D G3DSA:3.40.50.10800 200 295 3.5E-94 T 13-10-2018 Y11_18441 f7f606b2031cdb9d7375548a4284b96b 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 1.1E-118 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Y11_18441 f7f606b2031cdb9d7375548a4284b96b 353 SUPERFAMILY SSF142754 29 340 5.1E-105 T 13-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Y11_18441 f7f606b2031cdb9d7375548a4284b96b 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 70.216 T 13-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Y11_02021 6a82ea1c0bd170f45680c4c483fc5270 364 SMART SM00354 35 105 1.2E-28 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_02021 6a82ea1c0bd170f45680c4c483fc5270 364 ProSitePatterns PS00356 LacI-type HTH domain signature. 38 56 - T 13-10-2018 Y11_02021 6a82ea1c0bd170f45680c4c483fc5270 364 Pfam PF13377 Periplasmic binding protein-like domain 203 364 2.5E-27 T 13-10-2018 Y11_02021 6a82ea1c0bd170f45680c4c483fc5270 364 Gene3D G3DSA:1.10.260.40 26 93 1.2E-20 T 13-10-2018 Y11_02021 6a82ea1c0bd170f45680c4c483fc5270 364 SUPERFAMILY SSF53822 93 346 1.04E-42 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_02021 6a82ea1c0bd170f45680c4c483fc5270 364 Gene3D G3DSA:3.40.50.2300 191 324 1.8E-58 T 13-10-2018 Y11_02021 6a82ea1c0bd170f45680c4c483fc5270 364 SUPERFAMILY SSF47413 35 93 5.16E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_02021 6a82ea1c0bd170f45680c4c483fc5270 364 Gene3D G3DSA:3.40.50.2300 97 340 1.8E-58 T 13-10-2018 Y11_02021 6a82ea1c0bd170f45680c4c483fc5270 364 Pfam PF00356 Bacterial regulatory proteins, lacI family 37 82 6.0E-18 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_17691 9fba10faf06dcb86e7acfbedde31e32e 264 Gene3D G3DSA:3.40.190.10 164 253 5.4E-47 T 13-10-2018 Y11_17691 9fba10faf06dcb86e7acfbedde31e32e 264 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.5E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_17691 9fba10faf06dcb86e7acfbedde31e32e 264 SUPERFAMILY SSF46785 2 112 6.31E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_17691 9fba10faf06dcb86e7acfbedde31e32e 264 Gene3D G3DSA:1.10.10.10 2 90 4.4E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_17691 9fba10faf06dcb86e7acfbedde31e32e 264 Pfam PF03466 LysR substrate binding domain 89 252 1.4E-31 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_17691 9fba10faf06dcb86e7acfbedde31e32e 264 SUPERFAMILY SSF53850 89 251 2.9E-30 T 13-10-2018 Y11_17691 9fba10faf06dcb86e7acfbedde31e32e 264 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.3E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_17691 9fba10faf06dcb86e7acfbedde31e32e 264 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.3E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_17691 9fba10faf06dcb86e7acfbedde31e32e 264 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.3E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_17691 9fba10faf06dcb86e7acfbedde31e32e 264 Gene3D G3DSA:3.40.190.10 91 163 5.4E-47 T 13-10-2018 Y11_42871 494e07928abe48e585641b6d73ee62e4 142 SUPERFAMILY SSF54919 1 140 2.36E-58 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Y11_42871 494e07928abe48e585641b6d73ee62e4 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.146 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Y11_42871 494e07928abe48e585641b6d73ee62e4 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 9.6E-56 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Y11_42871 494e07928abe48e585641b6d73ee62e4 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.1E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Y11_42871 494e07928abe48e585641b6d73ee62e4 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.1E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Y11_42871 494e07928abe48e585641b6d73ee62e4 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.1E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Y11_42871 494e07928abe48e585641b6d73ee62e4 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.1E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Y11_42871 494e07928abe48e585641b6d73ee62e4 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.1E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Y11_42871 494e07928abe48e585641b6d73ee62e4 142 SMART SM00562 3 140 2.9E-84 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Y11_42871 494e07928abe48e585641b6d73ee62e4 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 13-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_42871 494e07928abe48e585641b6d73ee62e4 142 Gene3D G3DSA:3.30.70.141 1 141 3.8E-58 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Y11_17231 eb7ed998e8a9e44423478f42a411c51d 289 Pfam PF03466 LysR substrate binding domain 85 285 5.1E-39 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_17231 eb7ed998e8a9e44423478f42a411c51d 289 Gene3D G3DSA:3.40.190.290 89 289 6.6E-34 T 13-10-2018 Y11_17231 eb7ed998e8a9e44423478f42a411c51d 289 Gene3D G3DSA:1.10.10.10 1 87 1.3E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_17231 eb7ed998e8a9e44423478f42a411c51d 289 SUPERFAMILY SSF46785 1 109 1.74E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_17231 eb7ed998e8a9e44423478f42a411c51d 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.5E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_17231 eb7ed998e8a9e44423478f42a411c51d 289 SUPERFAMILY SSF53850 85 287 1.09E-37 T 13-10-2018 Y11_34001 fcbd78ed17f92499d70669aec70fb28b 296 TIGRFAM TIGR00688 rarD: protein RarD 8 261 1.7E-98 T 13-10-2018 IPR004626 RarD protein GO:0005887 Y11_34001 fcbd78ed17f92499d70669aec70fb28b 296 SUPERFAMILY SSF103481 188 285 1.14E-6 T 13-10-2018 Y11_34001 fcbd78ed17f92499d70669aec70fb28b 296 SUPERFAMILY SSF103481 42 145 2.48E-15 T 13-10-2018 Y11_34001 fcbd78ed17f92499d70669aec70fb28b 296 Pfam PF00892 EamA-like transporter family 9 142 4.4E-17 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_01641 a4101f20e14e579e67abfaf2c3a654f3 433 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 33 136 1.8E-8 T 13-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 Y11_01641 a4101f20e14e579e67abfaf2c3a654f3 433 Gene3D G3DSA:3.40.50.1240 32 423 2.9E-135 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Y11_01641 a4101f20e14e579e67abfaf2c3a654f3 433 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 34 48 - T 13-10-2018 IPR033379 Histidine acid phosphatase active site Y11_01641 a4101f20e14e579e67abfaf2c3a654f3 433 SUPERFAMILY SSF53254 30 429 6.39E-68 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Y11_01641 a4101f20e14e579e67abfaf2c3a654f3 433 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 324 340 - T 13-10-2018 IPR033379 Histidine acid phosphatase active site Y11_01641 a4101f20e14e579e67abfaf2c3a654f3 433 Gene3D G3DSA:3.40.50.1240 47 285 2.9E-135 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Y11_09041 43fb71b25845a555409e4815e5cb4d0e 435 SMART SM00387 315 425 1.4E-33 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_09041 43fb71b25845a555409e4815e5cb4d0e 435 SMART SM00304 158 210 1.5E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_09041 43fb71b25845a555409e4815e5cb4d0e 435 Gene3D G3DSA:1.10.287.130 162 272 2.0E-19 T 13-10-2018 Y11_09041 43fb71b25845a555409e4815e5cb4d0e 435 SMART SM00388 211 271 4.2E-5 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_09041 43fb71b25845a555409e4815e5cb4d0e 435 SUPERFAMILY SSF47384 194 271 1.12E-9 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_09041 43fb71b25845a555409e4815e5cb4d0e 435 SUPERFAMILY SSF55874 260 423 3.41E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_09041 43fb71b25845a555409e4815e5cb4d0e 435 Pfam PF00672 HAMP domain 164 206 1.0E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_09041 43fb71b25845a555409e4815e5cb4d0e 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 423 3.4E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_09041 43fb71b25845a555409e4815e5cb4d0e 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 2.1E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_09041 43fb71b25845a555409e4815e5cb4d0e 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 2.1E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_09041 43fb71b25845a555409e4815e5cb4d0e 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 2.1E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_09041 43fb71b25845a555409e4815e5cb4d0e 435 Gene3D G3DSA:3.30.565.10 278 425 1.3E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_18471 36d699c7471b1878edf4a321e078ec0b 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 427 1.2E-159 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Y11_18471 36d699c7471b1878edf4a321e078ec0b 430 Gene3D G3DSA:2.120.10.30 165 430 1.6E-115 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Y11_18471 36d699c7471b1878edf4a321e078ec0b 430 SUPERFAMILY SSF52964 28 161 2.09E-40 T 13-10-2018 Y11_18471 36d699c7471b1878edf4a321e078ec0b 430 Gene3D G3DSA:3.40.50.10070 19 164 8.5E-54 T 13-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 Y11_18471 36d699c7471b1878edf4a321e078ec0b 430 SUPERFAMILY SSF69304 155 428 9.15E-57 T 13-10-2018 Y11_18471 36d699c7471b1878edf4a321e078ec0b 430 Pfam PF04052 TolB amino-terminal domain 23 122 1.7E-32 T 13-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 Y11_18471 36d699c7471b1878edf4a321e078ec0b 430 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 4 426 50.17 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Y11_18471 36d699c7471b1878edf4a321e078ec0b 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 1.9E-9 T 13-10-2018 IPR011659 WD40-like Beta Propeller Y11_18471 36d699c7471b1878edf4a321e078ec0b 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 2.0E-5 T 13-10-2018 IPR011659 WD40-like Beta Propeller Y11_18471 36d699c7471b1878edf4a321e078ec0b 430 Pfam PF07676 WD40-like Beta Propeller Repeat 369 397 0.0065 T 13-10-2018 IPR011659 WD40-like Beta Propeller Y11_18471 36d699c7471b1878edf4a321e078ec0b 430 Pfam PF07676 WD40-like Beta Propeller Repeat 282 315 9.3E-10 T 13-10-2018 IPR011659 WD40-like Beta Propeller Y11_05291 6921b6e3b114446f07f2df933b9c9d46 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 3.9E-37 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Y11_05291 6921b6e3b114446f07f2df933b9c9d46 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site Y11_05291 6921b6e3b114446f07f2df933b9c9d46 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.7E-16 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain Y11_05291 6921b6e3b114446f07f2df933b9c9d46 78 Gene3D G3DSA:1.10.1200.10 1 76 5.4E-29 T 13-10-2018 IPR036736 ACP-like superfamily Y11_05291 6921b6e3b114446f07f2df933b9c9d46 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.174 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Y11_05291 6921b6e3b114446f07f2df933b9c9d46 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 0.003 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Y11_05291 6921b6e3b114446f07f2df933b9c9d46 78 SUPERFAMILY SSF47336 2 76 1.09E-23 T 13-10-2018 IPR036736 ACP-like superfamily Y11_23981 a0b9fc8c209891a88ecb699ddf8bccb4 275 SUPERFAMILY SSF52540 61 271 5.16E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_23981 a0b9fc8c209891a88ecb699ddf8bccb4 275 Gene3D G3DSA:3.40.50.300 71 275 1.2E-63 T 13-10-2018 Y11_23981 a0b9fc8c209891a88ecb699ddf8bccb4 275 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 63 274 6.5E-93 T 13-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 Y11_23981 a0b9fc8c209891a88ecb699ddf8bccb4 275 PIRSF PIRSF005624 55 275 1.5E-98 T 13-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 Y11_23981 a0b9fc8c209891a88ecb699ddf8bccb4 275 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 91 252 5.4E-37 T 13-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Y11_39301 6292ef882d389b732996716c4b54ddfa 887 PIRSF PIRSF000156 1 887 0.0 T 13-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Y11_39301 6292ef882d389b732996716c4b54ddfa 887 Gene3D G3DSA:3.40.50.970 57 471 7.0E-136 T 13-10-2018 Y11_39301 6292ef882d389b732996716c4b54ddfa 887 SUPERFAMILY SSF52922 702 885 3.14E-62 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Y11_39301 6292ef882d389b732996716c4b54ddfa 887 Gene3D G3DSA:3.40.50.920 707 887 2.2E-73 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Y11_39301 6292ef882d389b732996716c4b54ddfa 887 Gene3D G3DSA:3.40.50.970 472 706 8.6E-111 T 13-10-2018 Y11_39301 6292ef882d389b732996716c4b54ddfa 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 13-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Y11_39301 6292ef882d389b732996716c4b54ddfa 887 SUPERFAMILY SSF52518 474 701 1.88E-98 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_39301 6292ef882d389b732996716c4b54ddfa 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 111 294 4.2E-8 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Y11_39301 6292ef882d389b732996716c4b54ddfa 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 362 427 1.0E-4 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Y11_39301 6292ef882d389b732996716c4b54ddfa 887 SUPERFAMILY SSF52518 59 469 1.2E-142 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_21681 92b358a52c818ca024c35fd2c0133369 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 214 1.1E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_21681 92b358a52c818ca024c35fd2c0133369 227 Gene3D G3DSA:1.10.3720.10 3 222 1.5E-47 T 13-10-2018 IPR035906 MetI-like superfamily Y11_21681 92b358a52c818ca024c35fd2c0133369 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 116 2.5E-25 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Y11_21681 92b358a52c818ca024c35fd2c0133369 227 SUPERFAMILY SSF161098 15 208 4.58E-40 T 13-10-2018 IPR035906 MetI-like superfamily Y11_05221 cff46c0fa0aede9ee302aacff3e305bc 193 Pfam PF02545 Maf-like protein 3 185 1.5E-42 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Y11_05221 cff46c0fa0aede9ee302aacff3e305bc 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 7.1E-55 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Y11_05221 cff46c0fa0aede9ee302aacff3e305bc 193 SUPERFAMILY SSF52972 1 186 5.62E-57 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Y11_05221 cff46c0fa0aede9ee302aacff3e305bc 193 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 28.12 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Y11_05221 cff46c0fa0aede9ee302aacff3e305bc 193 PIRSF PIRSF006305 1 192 2.0E-38 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Y11_05221 cff46c0fa0aede9ee302aacff3e305bc 193 Gene3D G3DSA:3.90.950.10 2 193 6.3E-59 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Y11_35021 dcf657a2c814a2195814d9552680e9c9 655 Pfam PF13667 ThiC-associated domain 33 113 1.3E-33 T 13-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Y11_35021 dcf657a2c814a2195814d9552680e9c9 655 Pfam PF01964 Radical SAM ThiC family 154 602 4.4E-198 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Y11_35021 dcf657a2c814a2195814d9552680e9c9 655 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 153 605 1.0E-221 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Y11_35021 dcf657a2c814a2195814d9552680e9c9 655 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 153 606 99.064 T 13-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Y11_35021 dcf657a2c814a2195814d9552680e9c9 655 Gene3D G3DSA:3.20.20.540 224 537 4.3E-152 T 13-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Y11_42381 04c2f5e2ee0d7d23f0cae4090169d257 241 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 22.371 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Y11_42381 04c2f5e2ee0d7d23f0cae4090169d257 241 Gene3D G3DSA:1.20.1440.120 79 236 6.8E-55 T 13-10-2018 Y11_42381 04c2f5e2ee0d7d23f0cae4090169d257 241 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 2.7E-36 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Y11_42381 04c2f5e2ee0d7d23f0cae4090169d257 241 SUPERFAMILY SSF57863 86 173 7.59E-9 T 13-10-2018 IPR037278 ARFGAP/RecO-like zinc finger Y11_42381 04c2f5e2ee0d7d23f0cae4090169d257 241 Pfam PF11967 Recombination protein O N terminal 4 76 1.8E-21 T 13-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal Y11_42381 04c2f5e2ee0d7d23f0cae4090169d257 241 Pfam PF02565 Recombination protein O C terminal 83 226 2.3E-23 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Y11_42381 04c2f5e2ee0d7d23f0cae4090169d257 241 SUPERFAMILY SSF50249 4 75 9.25E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_42381 04c2f5e2ee0d7d23f0cae4090169d257 241 Gene3D G3DSA:2.40.50.140 1 78 1.5E-31 T 13-10-2018 Y11_38111 573c79f5742360bca12672a14db93720 460 SUPERFAMILY SSF52540 71 290 4.59E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_38111 573c79f5742360bca12672a14db93720 460 Pfam PF13481 AAA domain 88 225 2.3E-13 T 13-10-2018 Y11_38111 573c79f5742360bca12672a14db93720 460 Gene3D G3DSA:3.40.50.300 69 282 1.9E-38 T 13-10-2018 Y11_38111 573c79f5742360bca12672a14db93720 460 PRINTS PR01874 DNA repair protein radA signature 127 144 1.2E-93 T 13-10-2018 Y11_38111 573c79f5742360bca12672a14db93720 460 PRINTS PR01874 DNA repair protein radA signature 216 244 1.2E-93 T 13-10-2018 Y11_38111 573c79f5742360bca12672a14db93720 460 PRINTS PR01874 DNA repair protein radA signature 177 201 1.2E-93 T 13-10-2018 Y11_38111 573c79f5742360bca12672a14db93720 460 PRINTS PR01874 DNA repair protein radA signature 325 348 1.2E-93 T 13-10-2018 Y11_38111 573c79f5742360bca12672a14db93720 460 PRINTS PR01874 DNA repair protein radA signature 11 35 1.2E-93 T 13-10-2018 Y11_38111 573c79f5742360bca12672a14db93720 460 PRINTS PR01874 DNA repair protein radA signature 86 114 1.2E-93 T 13-10-2018 Y11_38111 573c79f5742360bca12672a14db93720 460 PRINTS PR01874 DNA repair protein radA signature 251 277 1.2E-93 T 13-10-2018 Y11_38111 573c79f5742360bca12672a14db93720 460 SUPERFAMILY SSF54211 258 458 2.35E-42 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_38111 573c79f5742360bca12672a14db93720 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 3.7E-9 T 13-10-2018 Y11_38111 573c79f5742360bca12672a14db93720 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 6.0E-232 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Y11_38111 573c79f5742360bca12672a14db93720 460 SMART SM00382 94 248 1.9E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_38111 573c79f5742360bca12672a14db93720 460 Gene3D G3DSA:3.30.230.10 306 460 2.2E-21 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y11_38111 573c79f5742360bca12672a14db93720 460 Hamap MF_01498 DNA repair protein RadA [radA]. 22 458 42.88 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Y11_07571 261d5047f840489871194db9c6eb6aef 557 PIRSF PIRSF001432 1 557 6.4E-285 T 13-10-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 Y11_07571 261d5047f840489871194db9c6eb6aef 557 Gene3D G3DSA:1.50.10.20 324 521 6.3E-37 T 13-10-2018 Y11_07571 261d5047f840489871194db9c6eb6aef 557 Gene3D G3DSA:1.50.10.20 18 311 4.3E-97 T 13-10-2018 Y11_07571 261d5047f840489871194db9c6eb6aef 557 Pfam PF06917 Periplasmic pectate lyase 14 542 1.7E-123 T 13-10-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 Y11_02501 5248e5f8c3ccc665878147658693733a 479 Gene3D G3DSA:2.40.180.10 2 479 1.5E-232 T 13-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Y11_02501 5248e5f8c3ccc665878147658693733a 479 PRINTS PR00067 Catalase signature 21 44 1.7E-70 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Y11_02501 5248e5f8c3ccc665878147658693733a 479 PRINTS PR00067 Catalase signature 84 102 1.7E-70 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Y11_02501 5248e5f8c3ccc665878147658693733a 479 PRINTS PR00067 Catalase signature 105 122 1.7E-70 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Y11_02501 5248e5f8c3ccc665878147658693733a 479 PRINTS PR00067 Catalase signature 321 347 1.7E-70 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Y11_02501 5248e5f8c3ccc665878147658693733a 479 PRINTS PR00067 Catalase signature 289 316 1.7E-70 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Y11_02501 5248e5f8c3ccc665878147658693733a 479 PRINTS PR00067 Catalase signature 124 142 1.7E-70 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Y11_02501 5248e5f8c3ccc665878147658693733a 479 PIRSF PIRSF038928 1 479 6.8E-221 T 13-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Y11_02501 5248e5f8c3ccc665878147658693733a 479 Pfam PF06628 Catalase-related immune-responsive 415 476 2.3E-21 T 13-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Y11_02501 5248e5f8c3ccc665878147658693733a 479 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 13-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Y11_02501 5248e5f8c3ccc665878147658693733a 479 Pfam PF00199 Catalase 8 388 3.4E-187 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Y11_02501 5248e5f8c3ccc665878147658693733a 479 SMART SM01060 8 392 1.2E-280 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Y11_02501 5248e5f8c3ccc665878147658693733a 479 SUPERFAMILY SSF56634 4 478 5.63E-210 T 13-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Y11_03531 ca2c996938fe01955889a48d5591f52f 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 2.3E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_03531 ca2c996938fe01955889a48d5591f52f 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_34721 995184ca1900f0b6d24e691cc5f616c3 495 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 73.764 T 13-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Y11_34721 995184ca1900f0b6d24e691cc5f616c3 495 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 1.2E-186 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Y11_34721 995184ca1900f0b6d24e691cc5f616c3 495 Gene3D G3DSA:1.20.5.570 455 494 1.3E-19 T 13-10-2018 Y11_34721 995184ca1900f0b6d24e691cc5f616c3 495 Gene3D G3DSA:3.40.1670.10 337 454 3.9E-52 T 13-10-2018 Y11_34721 995184ca1900f0b6d24e691cc5f616c3 495 SUPERFAMILY SSF50475 3 322 1.29E-127 T 13-10-2018 Y11_34721 995184ca1900f0b6d24e691cc5f616c3 495 SUPERFAMILY SSF143968 323 486 1.24E-68 T 13-10-2018 Y11_34721 995184ca1900f0b6d24e691cc5f616c3 495 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 431 2.5E-173 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Y11_10161 036fb42dd93e87c760a00f33db9ba192 157 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 2 157 6.4E-64 T 13-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 Y11_10161 036fb42dd93e87c760a00f33db9ba192 157 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 136 156 4.6E-45 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_10161 036fb42dd93e87c760a00f33db9ba192 157 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 121 136 4.6E-45 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_10161 036fb42dd93e87c760a00f33db9ba192 157 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 21 42 4.6E-45 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_10161 036fb42dd93e87c760a00f33db9ba192 157 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 78 101 4.6E-45 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_10161 036fb42dd93e87c760a00f33db9ba192 157 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 54 78 4.6E-45 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_10161 036fb42dd93e87c760a00f33db9ba192 157 Gene3D G3DSA:2.40.30.170 17 139 5.9E-13 T 13-10-2018 Y11_10161 036fb42dd93e87c760a00f33db9ba192 157 ProSitePatterns PS00543 HlyD family secretion proteins signature. 121 143 - T 13-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 Y11_10161 036fb42dd93e87c760a00f33db9ba192 157 Pfam PF13437 HlyD family secretion protein 9 116 1.6E-18 T 13-10-2018 Y11_34791 27b7c8da30d06628d6ecb49fefb75cd1 139 Pfam PF12724 Flavodoxin domain 2 113 3.8E-42 T 13-10-2018 IPR026816 Flavodoxin domain Y11_34791 27b7c8da30d06628d6ecb49fefb75cd1 139 SUPERFAMILY SSF52218 4 128 2.85E-20 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_12731 1f0697dd20e0b393a3cbdd4d96e5fcbe 214 Gene3D G3DSA:2.160.10.10 2 207 6.4E-55 T 13-10-2018 Y11_12731 1f0697dd20e0b393a3cbdd4d96e5fcbe 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 1.2E-8 T 13-10-2018 IPR001451 Hexapeptide repeat Y11_12731 1f0697dd20e0b393a3cbdd4d96e5fcbe 214 SUPERFAMILY SSF51161 48 201 7.76E-38 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Y11_06491 deccd68aa646615304f0bda8ac181a99 169 Gene3D G3DSA:1.20.1260.10 1 169 1.2E-48 T 13-10-2018 IPR012347 Ferritin-like Y11_06491 deccd68aa646615304f0bda8ac181a99 169 SUPERFAMILY SSF47240 1 159 8.35E-57 T 13-10-2018 IPR009078 Ferritin-like superfamily Y11_06491 deccd68aa646615304f0bda8ac181a99 169 Pfam PF00210 Ferritin-like domain 8 143 4.3E-39 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Y11_17751 a2cf8f130e254a778582f8a03461d4b6 365 Gene3D G3DSA:3.40.190.10 87 361 1.2E-98 T 13-10-2018 Y11_17751 a2cf8f130e254a778582f8a03461d4b6 365 SUPERFAMILY SSF53850 84 363 4.78E-61 T 13-10-2018 Y11_17751 a2cf8f130e254a778582f8a03461d4b6 365 Gene3D G3DSA:3.40.190.120 188 301 1.2E-98 T 13-10-2018 Y11_17751 a2cf8f130e254a778582f8a03461d4b6 365 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 84 359 1.6E-56 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Y11_26151 07f5eda94ee9ece125dc2702f1f5189a 299 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 1.0E-25 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Y11_26151 07f5eda94ee9ece125dc2702f1f5189a 299 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 7.4E-110 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Y11_26151 07f5eda94ee9ece125dc2702f1f5189a 299 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.195 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Y11_26151 07f5eda94ee9ece125dc2702f1f5189a 299 PIRSF PIRSF005917 2 288 3.2E-105 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Y11_26151 07f5eda94ee9ece125dc2702f1f5189a 299 Gene3D G3DSA:3.40.1010.10 2 120 2.2E-46 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Y11_26151 07f5eda94ee9ece125dc2702f1f5189a 299 Gene3D G3DSA:3.30.950.10 121 241 1.1E-41 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Y11_26151 07f5eda94ee9ece125dc2702f1f5189a 299 SUPERFAMILY SSF53790 13 232 9.42E-83 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Y11_26151 07f5eda94ee9ece125dc2702f1f5189a 299 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 13-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 Y11_19681 be56340f18e7d7ea3efb85cba4b9dcb9 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 2.5E-11 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Y11_19681 be56340f18e7d7ea3efb85cba4b9dcb9 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 2.5E-11 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Y11_19681 be56340f18e7d7ea3efb85cba4b9dcb9 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.5E-11 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Y11_19681 be56340f18e7d7ea3efb85cba4b9dcb9 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 162 2.7E-48 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Y11_19681 be56340f18e7d7ea3efb85cba4b9dcb9 164 SUPERFAMILY SSF50891 1 162 1.2E-59 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily Y11_19681 be56340f18e7d7ea3efb85cba4b9dcb9 164 Gene3D G3DSA:2.40.100.10 1 164 7.1E-72 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily Y11_19681 be56340f18e7d7ea3efb85cba4b9dcb9 164 PIRSF PIRSF001467 1 164 1.1E-28 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Y11_19681 be56340f18e7d7ea3efb85cba4b9dcb9 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Y11_27331 ecdff43b6e2f98bef63dc1938b47fbcc 434 Pfam PF00939 Sodium:sulfate symporter transmembrane region 1 434 5.2E-131 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Y11_27331 ecdff43b6e2f98bef63dc1938b47fbcc 434 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 1 428 2.4E-106 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Y11_27331 ecdff43b6e2f98bef63dc1938b47fbcc 434 PIRSF PIRSF002457 1 434 4.0E-121 T 13-10-2018 IPR030676 Citrate carrier CitT-related Y11_08971 658a89d57085c1af082b73b60d1beec6 1295 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 617 693 3.1E-18 T 13-10-2018 IPR011709 Domain of unknown function DUF1605 Y11_08971 658a89d57085c1af082b73b60d1beec6 1295 SUPERFAMILY SSF52540 70 596 3.79E-109 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_08971 658a89d57085c1af082b73b60d1beec6 1295 Gene3D G3DSA:3.40.50.300 249 417 5.1E-56 T 13-10-2018 Y11_08971 658a89d57085c1af082b73b60d1beec6 1295 Gene3D G3DSA:3.40.50.300 22 248 1.0E-74 T 13-10-2018 Y11_08971 658a89d57085c1af082b73b60d1beec6 1295 Pfam PF11898 Domain of unknown function (DUF3418) 708 1291 8.4E-237 T 13-10-2018 IPR024590 RNA helicase HrpA, C-terminal Y11_08971 658a89d57085c1af082b73b60d1beec6 1295 SMART SM00847 460 554 5.5E-35 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 Y11_08971 658a89d57085c1af082b73b60d1beec6 1295 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 10 1292 0.0 T 13-10-2018 IPR010222 RNA helicase HrpA GO:0004004 Y11_08971 658a89d57085c1af082b73b60d1beec6 1295 SMART SM00490 301 400 2.0E-15 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_08971 658a89d57085c1af082b73b60d1beec6 1295 Gene3D G3DSA:1.20.120.1080 445 547 1.2E-17 T 13-10-2018 Y11_08971 658a89d57085c1af082b73b60d1beec6 1295 Pfam PF00270 DEAD/DEAH box helicase 83 229 2.0E-6 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Y11_08971 658a89d57085c1af082b73b60d1beec6 1295 Pfam PF00271 Helicase conserved C-terminal domain 282 399 1.4E-11 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_08971 658a89d57085c1af082b73b60d1beec6 1295 SMART SM00382 88 380 5.6E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_08971 658a89d57085c1af082b73b60d1beec6 1295 Pfam PF04408 Helicase associated domain (HA2) 462 552 1.9E-16 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 Y11_08971 658a89d57085c1af082b73b60d1beec6 1295 SMART SM00487 71 255 1.5E-26 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Y11_17821 6b5af4351870a04be259fff71ea2a53a 533 Gene3D G3DSA:1.25.10.10 111 240 4.2E-8 T 13-10-2018 IPR011989 Armadillo-like helical Y11_17821 6b5af4351870a04be259fff71ea2a53a 533 Pfam PF13646 HEAT repeats 176 228 4.9E-7 T 13-10-2018 Y11_17821 6b5af4351870a04be259fff71ea2a53a 533 Pfam PF02653 Branched-chain amino acid transport system / permease component 241 516 7.9E-49 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_17821 6b5af4351870a04be259fff71ea2a53a 533 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 239 530 6.3E-128 T 13-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type Y11_17821 6b5af4351870a04be259fff71ea2a53a 533 SUPERFAMILY SSF48371 122 229 2.54E-10 T 13-10-2018 IPR016024 Armadillo-type fold Y11_37901 354c887e23ce35192a4261d8d2d1e38e 366 Gene3D G3DSA:3.30.70.270 182 357 1.1E-50 T 13-10-2018 Y11_37901 354c887e23ce35192a4261d8d2d1e38e 366 SUPERFAMILY SSF55073 201 356 1.88E-43 T 13-10-2018 IPR029787 Nucleotide cyclase Y11_37901 354c887e23ce35192a4261d8d2d1e38e 366 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 195 354 4.1E-45 T 13-10-2018 IPR000160 GGDEF domain Y11_37901 354c887e23ce35192a4261d8d2d1e38e 366 SMART SM00267 185 355 4.9E-52 T 13-10-2018 IPR000160 GGDEF domain Y11_37901 354c887e23ce35192a4261d8d2d1e38e 366 Pfam PF00990 Diguanylate cyclase, GGDEF domain 197 351 4.0E-46 T 13-10-2018 IPR000160 GGDEF domain Y11_33501 e72cc0d226b8efe8f3d033c98fefb9ba 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 3.4E-27 T 13-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Y11_33501 e72cc0d226b8efe8f3d033c98fefb9ba 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 483 7.4E-22 T 13-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Y11_33501 e72cc0d226b8efe8f3d033c98fefb9ba 492 SUPERFAMILY SSF48179 210 343 4.93E-40 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_33501 e72cc0d226b8efe8f3d033c98fefb9ba 492 Gene3D G3DSA:3.40.50.720 1 208 5.6E-87 T 13-10-2018 Y11_33501 e72cc0d226b8efe8f3d033c98fefb9ba 492 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 6.0E-135 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Y11_33501 e72cc0d226b8efe8f3d033c98fefb9ba 492 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 486 39.214 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Y11_33501 e72cc0d226b8efe8f3d033c98fefb9ba 492 Gene3D G3DSA:1.10.1040.10 209 492 2.0E-127 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Y11_33501 e72cc0d226b8efe8f3d033c98fefb9ba 492 SUPERFAMILY SSF51735 28 209 6.3E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_33501 e72cc0d226b8efe8f3d033c98fefb9ba 492 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.1E-58 T 13-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Y11_33501 e72cc0d226b8efe8f3d033c98fefb9ba 492 SUPERFAMILY SSF48179 348 485 2.72E-41 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_17571 3940f838ea71dd3932be087844ebd772 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 2.5E-18 T 13-10-2018 IPR010854 Domain of unknown function DUF1471 Y11_17571 3940f838ea71dd3932be087844ebd772 86 SUPERFAMILY SSF159871 3 86 3.79E-26 T 13-10-2018 IPR036275 YdgH-like superfamily Y11_17571 3940f838ea71dd3932be087844ebd772 86 Gene3D G3DSA:3.30.1660.10 22 86 3.4E-18 T 13-10-2018 IPR025543 Dodecin-like Y11_11561 22989cc391406365a7301b1f691c1957 356 Gene3D G3DSA:1.10.8.350 71 236 2.6E-86 T 13-10-2018 Y11_11561 22989cc391406365a7301b1f691c1957 356 Pfam PF13406 Transglycosylase SLT domain 61 352 4.8E-105 T 13-10-2018 IPR031304 Transglycosylase SLT domain 2 Y11_11561 22989cc391406365a7301b1f691c1957 356 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 60 355 3.9E-118 T 13-10-2018 IPR011970 Lytic murein transglycosylase Y11_11561 22989cc391406365a7301b1f691c1957 356 SUPERFAMILY SSF53955 55 354 2.81E-97 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Y11_11561 22989cc391406365a7301b1f691c1957 356 Gene3D G3DSA:1.10.530.10 103 351 2.6E-86 T 13-10-2018 Y11_p0411 6c991e0502b05278d81ea746fbdc75e6 388 Gene3D G3DSA:3.40.50.300 105 384 5.8E-51 T 13-10-2018 Y11_p0411 6c991e0502b05278d81ea746fbdc75e6 388 Pfam PF13614 AAA domain 108 285 1.7E-27 T 13-10-2018 IPR025669 AAA domain Y11_p0411 6c991e0502b05278d81ea746fbdc75e6 388 SUPERFAMILY SSF46955 40 93 2.06E-7 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Y11_p0411 6c991e0502b05278d81ea746fbdc75e6 388 Gene3D G3DSA:1.10.1660.10 31 97 4.8E-7 T 13-10-2018 Y11_p0411 6c991e0502b05278d81ea746fbdc75e6 388 Pfam PF00376 MerR family regulatory protein 41 69 5.7E-9 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Y11_p0411 6c991e0502b05278d81ea746fbdc75e6 388 SUPERFAMILY SSF52540 103 350 8.39E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 PRINTS PR01373 Yersinia serine/threonine protein kinase signature 420 441 5.5E-152 T 13-10-2018 IPR003547 Serine/threonine protein kinase, yersinia-type GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 PRINTS PR01373 Yersinia serine/threonine protein kinase signature 500 522 5.5E-152 T 13-10-2018 IPR003547 Serine/threonine protein kinase, yersinia-type GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 PRINTS PR01373 Yersinia serine/threonine protein kinase signature 634 655 5.5E-152 T 13-10-2018 IPR003547 Serine/threonine protein kinase, yersinia-type GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 PRINTS PR01373 Yersinia serine/threonine protein kinase signature 554 571 5.5E-152 T 13-10-2018 IPR003547 Serine/threonine protein kinase, yersinia-type GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 PRINTS PR01373 Yersinia serine/threonine protein kinase signature 215 234 5.5E-152 T 13-10-2018 IPR003547 Serine/threonine protein kinase, yersinia-type GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 PRINTS PR01373 Yersinia serine/threonine protein kinase signature 105 127 5.5E-152 T 13-10-2018 IPR003547 Serine/threonine protein kinase, yersinia-type GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 PRINTS PR01373 Yersinia serine/threonine protein kinase signature 177 202 5.5E-152 T 13-10-2018 IPR003547 Serine/threonine protein kinase, yersinia-type GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 PRINTS PR01373 Yersinia serine/threonine protein kinase signature 327 347 5.5E-152 T 13-10-2018 IPR003547 Serine/threonine protein kinase, yersinia-type GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 PRINTS PR01373 Yersinia serine/threonine protein kinase signature 21 44 5.5E-152 T 13-10-2018 IPR003547 Serine/threonine protein kinase, yersinia-type GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 PRINTS PR01373 Yersinia serine/threonine protein kinase signature 378 398 5.5E-152 T 13-10-2018 IPR003547 Serine/threonine protein kinase, yersinia-type GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 PRINTS PR01373 Yersinia serine/threonine protein kinase signature 669 689 5.5E-152 T 13-10-2018 IPR003547 Serine/threonine protein kinase, yersinia-type GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 SUPERFAMILY SSF56112 151 407 2.02E-20 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 263 275 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 Pfam PF00069 Protein kinase domain 185 405 5.4E-11 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 SMART SM00220 146 405 9.7E-6 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 Pfam PF09632 Rac1-binding domain 433 729 4.8E-197 T 13-10-2018 IPR019093 Rac1-binding domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 Gene3D G3DSA:1.20.120.1330 432 578 3.6E-96 T 13-10-2018 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 Gene3D G3DSA:1.10.510.10 146 431 5.6E-17 T 13-10-2018 Y11_p0031 2a46b1fd63e640d05d4cd2830de4a05a 729 Gene3D G3DSA:1.20.58.1230 582 729 3.7E-83 T 13-10-2018 Y11_23721 b363a45d73695d78a8a81b6cd8ca208e 319 SUPERFAMILY SSF81345 5 313 9.29E-68 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_23721 b363a45d73695d78a8a81b6cd8ca208e 319 Gene3D G3DSA:1.10.3470.10 2 318 1.0E-64 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_23721 b363a45d73695d78a8a81b6cd8ca208e 319 Pfam PF01032 FecCD transport family 13 313 2.1E-64 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Y11_34651 f484f7829b686ca1c86c110bd6d78667 543 Pfam PF03109 ABC1 family 113 231 6.6E-34 T 13-10-2018 IPR004147 UbiB domain Y11_34651 f484f7829b686ca1c86c110bd6d78667 543 SUPERFAMILY SSF56112 94 435 8.72E-46 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Y11_34651 f484f7829b686ca1c86c110bd6d78667 543 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 57.418 T 13-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 Y11_34651 f484f7829b686ca1c86c110bd6d78667 543 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 3.1E-178 T 13-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 Y11_26831 f95643452d5103479b449995d933be86 128 SUPERFAMILY SSF47175 23 128 1.37E-33 T 13-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 Y11_26831 f95643452d5103479b449995d933be86 128 Pfam PF07361 Cytochrome b562 25 128 7.4E-31 T 13-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 Y11_26831 f95643452d5103479b449995d933be86 128 Gene3D G3DSA:1.20.120.10 18 128 1.7E-41 T 13-10-2018 Y11_26831 f95643452d5103479b449995d933be86 128 PIRSF PIRSF000029 1 128 5.5E-55 T 13-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 Y11_36511 04a8818ab8c3c79611538e19dc06da3c 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 7.0E-31 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Y11_36511 04a8818ab8c3c79611538e19dc06da3c 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 6.4E-25 T 13-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 Y11_36511 04a8818ab8c3c79611538e19dc06da3c 156 SUPERFAMILY SSF46785 3 77 8.98E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_36511 04a8818ab8c3c79611538e19dc06da3c 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 2.5E-23 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Y11_36511 04a8818ab8c3c79611538e19dc06da3c 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 2.5E-23 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Y11_36511 04a8818ab8c3c79611538e19dc06da3c 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 2.5E-23 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Y11_36511 04a8818ab8c3c79611538e19dc06da3c 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 2.5E-23 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Y11_36511 04a8818ab8c3c79611538e19dc06da3c 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 11 151 1.9E-45 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Y11_36511 04a8818ab8c3c79611538e19dc06da3c 156 Gene3D G3DSA:3.30.1360.40 79 156 1.5E-29 T 13-10-2018 Y11_36511 04a8818ab8c3c79611538e19dc06da3c 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 5.7E-21 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Y11_36511 04a8818ab8c3c79611538e19dc06da3c 156 Gene3D G3DSA:1.10.10.10 1 78 1.1E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_36511 04a8818ab8c3c79611538e19dc06da3c 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.237 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Y11_36511 04a8818ab8c3c79611538e19dc06da3c 156 SUPERFAMILY SSF55252 82 151 2.35E-18 T 13-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 Y11_28021 529d2d801d7fade01b54337f69c77fb4 218 Pfam PF06438 Heme-binding protein A (HasA) 1 211 2.7E-32 T 13-10-2018 IPR010495 Haem-binding HasA Y11_28021 529d2d801d7fade01b54337f69c77fb4 218 Gene3D G3DSA:3.30.1500.10 1 209 1.4E-60 T 13-10-2018 IPR036912 Haem-binding HasA superfamily Y11_28021 529d2d801d7fade01b54337f69c77fb4 218 SUPERFAMILY SSF54621 3 197 6.67E-10 T 13-10-2018 IPR036912 Haem-binding HasA superfamily Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 3.8E-172 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 SUPERFAMILY SSF50800 74 168 4.71E-25 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 SUPERFAMILY SSF51621 3 345 9.07E-88 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 8.7E-132 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 SUPERFAMILY SSF52935 329 479 8.5E-39 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 1.8E-29 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 Gene3D G3DSA:3.20.20.60 6 341 4.6E-153 T 13-10-2018 Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 Gene3D G3DSA:3.40.1380.20 342 474 4.6E-153 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 13-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 Gene3D G3DSA:2.40.33.10 74 172 4.6E-153 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 6.3E-52 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 6.3E-52 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 6.3E-52 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 6.3E-52 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 6.3E-52 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 6.3E-52 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_11741 db011f22ea19b530ebdaa8bc089cc002 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 6.3E-52 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Y11_37581 8f88a723d079ae4cb5c46bde9fea1f1d 291 Pfam PF01791 DeoC/LacD family aldolase 52 258 4.0E-18 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Y11_37581 8f88a723d079ae4cb5c46bde9fea1f1d 291 Hamap MF_02052 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [lsrF]. 1 291 75.206 T 13-10-2018 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase GO:0016747 Y11_37581 8f88a723d079ae4cb5c46bde9fea1f1d 291 SMART SM01133 51 259 7.6E-27 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Y11_37581 8f88a723d079ae4cb5c46bde9fea1f1d 291 PIRSF PIRSF038992 31 289 2.1E-77 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Y11_37581 8f88a723d079ae4cb5c46bde9fea1f1d 291 Gene3D G3DSA:3.20.20.70 1 291 2.7E-100 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_37581 8f88a723d079ae4cb5c46bde9fea1f1d 291 SUPERFAMILY SSF51569 35 274 8.79E-62 T 13-10-2018 Y11_15491 56d2084b95504185f7add07adf170f55 194 Gene3D G3DSA:1.10.357.10 53 189 1.1E-35 T 13-10-2018 Y11_15491 56d2084b95504185f7add07adf170f55 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.0E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Y11_15491 56d2084b95504185f7add07adf170f55 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.0E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Y11_15491 56d2084b95504185f7add07adf170f55 194 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Y11_15491 56d2084b95504185f7add07adf170f55 194 Gene3D G3DSA:1.10.10.60 6 52 3.7E-17 T 13-10-2018 Y11_15491 56d2084b95504185f7add07adf170f55 194 SUPERFAMILY SSF48498 81 189 1.69E-23 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Y11_15491 56d2084b95504185f7add07adf170f55 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 1.1E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Y11_15491 56d2084b95504185f7add07adf170f55 194 SUPERFAMILY SSF46689 2 77 1.85E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_09481 675e5fa5d5e4ca37711ef7592b0e72ea 252 SUPERFAMILY SSF55909 5 251 1.07E-46 T 13-10-2018 Y11_09481 675e5fa5d5e4ca37711ef7592b0e72ea 252 Pfam PF02274 Amidinotransferase 57 249 7.1E-10 T 13-10-2018 Y11_09481 675e5fa5d5e4ca37711ef7592b0e72ea 252 Gene3D G3DSA:3.75.10.10 1 252 1.7E-61 T 13-10-2018 Y11_06601 7efe3c3a94833cf5447c0b7331182519 254 Pfam PF08448 PAS fold 22 129 4.6E-9 T 13-10-2018 IPR013656 PAS fold-4 Y11_06601 7efe3c3a94833cf5447c0b7331182519 254 Gene3D G3DSA:1.10.10.10 151 216 5.7E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_06601 7efe3c3a94833cf5447c0b7331182519 254 SUPERFAMILY SSF46894 142 217 5.1E-10 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_11651 1405badae99f764eefe53928b0b88e92 232 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 2.2E-68 T 13-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 Y11_11651 1405badae99f764eefe53928b0b88e92 232 SUPERFAMILY SSF53067 110 219 1.81E-28 T 13-10-2018 Y11_11651 1405badae99f764eefe53928b0b88e92 232 SUPERFAMILY SSF53067 5 107 2.85E-30 T 13-10-2018 Y11_11651 1405badae99f764eefe53928b0b88e92 232 Pfam PF00814 Glycoprotease family 30 152 3.7E-29 T 13-10-2018 IPR000905 Gcp-like domain Y11_11651 1405badae99f764eefe53928b0b88e92 232 Gene3D G3DSA:3.30.420.40 5 224 1.1E-84 T 13-10-2018 Y11_11651 1405badae99f764eefe53928b0b88e92 232 Gene3D G3DSA:3.30.420.40 96 190 1.1E-84 T 13-10-2018 Y11_13121 2c6f7fc293503aae250abaa93e489edf 191 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 88 185 1.3E-14 T 13-10-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 Y11_13121 2c6f7fc293503aae250abaa93e489edf 191 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 11 74 1.5E-28 T 13-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 Y11_13121 2c6f7fc293503aae250abaa93e489edf 191 Gene3D G3DSA:1.10.260.40 10 76 7.9E-23 T 13-10-2018 Y11_13121 2c6f7fc293503aae250abaa93e489edf 191 Gene3D G3DSA:2.10.109.10 79 189 1.5E-13 T 13-10-2018 Y11_06571 d4f4bfaccae7a49fdd50e4ebe83c676c 150 PIRSF PIRSF029208 1 147 8.8E-60 T 13-10-2018 IPR016912 Bacteriophage P2, GpU Y11_06571 d4f4bfaccae7a49fdd50e4ebe83c676c 150 Pfam PF06995 Phage P2 GpU 6 125 7.9E-43 T 13-10-2018 IPR009734 Myoviridae, GpU Y11_37771 43d76679fc64ed88fe73199c413cc9c0 499 SUPERFAMILY SSF51905 16 497 3.99E-23 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_37771 43d76679fc64ed88fe73199c413cc9c0 499 Gene3D G3DSA:3.50.50.60 1 192 1.2E-5 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_28801 27a517756e51d6f02cb8e579d3e3128e 144 Gene3D G3DSA:3.40.250.10 23 142 6.1E-25 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Y11_28801 27a517756e51d6f02cb8e579d3e3128e 144 SMART SM00450 41 139 3.7E-20 T 13-10-2018 IPR001763 Rhodanese-like domain Y11_28801 27a517756e51d6f02cb8e579d3e3128e 144 SUPERFAMILY SSF52821 16 143 1.05E-30 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Y11_28801 27a517756e51d6f02cb8e579d3e3128e 144 Pfam PF00581 Rhodanese-like domain 44 134 3.1E-17 T 13-10-2018 IPR001763 Rhodanese-like domain Y11_28891 1247dfa1abbd5df4f7f204b708fd4e9e 310 SUPERFAMILY SSF51735 1 306 2.07E-64 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_28891 1247dfa1abbd5df4f7f204b708fd4e9e 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 49.086 T 13-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 Y11_28891 1247dfa1abbd5df4f7f204b708fd4e9e 310 Gene3D G3DSA:3.40.50.720 3 302 2.6E-120 T 13-10-2018 Y11_28891 1247dfa1abbd5df4f7f204b708fd4e9e 310 Gene3D G3DSA:3.90.25.10 168 290 2.6E-120 T 13-10-2018 Y11_28891 1247dfa1abbd5df4f7f204b708fd4e9e 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 9.5E-136 T 13-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 Y11_28891 1247dfa1abbd5df4f7f204b708fd4e9e 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 2.6E-47 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Y11_38011 6834bd16b2a5897d87409fd57b24c969 53 PIRSF PIRSF036466 1 53 1.8E-19 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Y11_38011 6834bd16b2a5897d87409fd57b24c969 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 53 18.495 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Y11_38011 6834bd16b2a5897d87409fd57b24c969 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 1.7E-13 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Y11_29731 3c197a3845b992606bd0b5ec65c5c9bf 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 2.8E-261 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29731 3c197a3845b992606bd0b5ec65c5c9bf 513 SUPERFAMILY SSF52540 96 381 6.7E-96 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_29731 3c197a3845b992606bd0b5ec65c5c9bf 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_29731 3c197a3845b992606bd0b5ec65c5c9bf 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 5.1E-74 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_29731 3c197a3845b992606bd0b5ec65c5c9bf 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_29731 3c197a3845b992606bd0b5ec65c5c9bf 513 SUPERFAMILY SSF47917 383 511 1.18E-45 T 13-10-2018 Y11_29731 3c197a3845b992606bd0b5ec65c5c9bf 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.9E-45 T 13-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29731 3c197a3845b992606bd0b5ec65c5c9bf 513 Gene3D G3DSA:3.40.50.300 94 382 4.9E-133 T 13-10-2018 Y11_29731 3c197a3845b992606bd0b5ec65c5c9bf 513 Gene3D G3DSA:2.40.30.20 1 93 8.2E-30 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_29731 3c197a3845b992606bd0b5ec65c5c9bf 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.182 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_29731 3c197a3845b992606bd0b5ec65c5c9bf 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 2.5E-13 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_29731 3c197a3845b992606bd0b5ec65c5c9bf 513 Gene3D G3DSA:1.20.150.20 383 513 2.6E-50 T 13-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Y11_00741 337ac4fe715ee06b689cfeed86da94bd 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 4.2E-31 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Y11_00741 337ac4fe715ee06b689cfeed86da94bd 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.5E-20 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Y11_00741 337ac4fe715ee06b689cfeed86da94bd 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.5E-20 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Y11_00741 337ac4fe715ee06b689cfeed86da94bd 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.5E-20 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Y11_00741 337ac4fe715ee06b689cfeed86da94bd 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 13-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Y11_00741 337ac4fe715ee06b689cfeed86da94bd 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.5E-28 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Y11_00741 337ac4fe715ee06b689cfeed86da94bd 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Y11_00741 337ac4fe715ee06b689cfeed86da94bd 85 SUPERFAMILY SSF55594 1 82 1.83E-27 T 13-10-2018 IPR035895 HPr-like superfamily Y11_00741 337ac4fe715ee06b689cfeed86da94bd 85 Gene3D G3DSA:3.30.1340.10 1 85 3.6E-35 T 13-10-2018 IPR035895 HPr-like superfamily Y11_10191 90ddc2ffd315eeeab0ae4c5c9fc0eb39 585 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 12 585 39.835 T 13-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Y11_10191 90ddc2ffd315eeeab0ae4c5c9fc0eb39 585 Pfam PF01268 Formate--tetrahydrofolate ligase 17 584 1.3E-228 T 13-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Y11_10191 90ddc2ffd315eeeab0ae4c5c9fc0eb39 585 Gene3D G3DSA:3.10.410.10 473 561 3.1E-28 T 13-10-2018 Y11_10191 90ddc2ffd315eeeab0ae4c5c9fc0eb39 585 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 350 361 - T 13-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Y11_10191 90ddc2ffd315eeeab0ae4c5c9fc0eb39 585 Gene3D G3DSA:3.40.50.300 19 460 1.1E-183 T 13-10-2018 Y11_10191 90ddc2ffd315eeeab0ae4c5c9fc0eb39 585 Gene3D G3DSA:3.30.1510.10 138 269 1.1E-183 T 13-10-2018 Y11_10191 90ddc2ffd315eeeab0ae4c5c9fc0eb39 585 SUPERFAMILY SSF52540 19 583 8.14E-207 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_40301 7d4a970b92fcf02adbb9d3b4e06306ed 138 Gene3D G3DSA:1.10.10.10 23 121 1.0E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_40301 7d4a970b92fcf02adbb9d3b4e06306ed 138 SUPERFAMILY SSF46894 43 118 9.35E-6 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_12391 cad9998dfe5bf038975cb63b0fcee52f 313 SUPERFAMILY SSF55347 129 270 2.26E-46 T 13-10-2018 Y11_12391 cad9998dfe5bf038975cb63b0fcee52f 313 SUPERFAMILY SSF51735 9 143 4.34E-42 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_12391 cad9998dfe5bf038975cb63b0fcee52f 313 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 127 7.2E-27 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Y11_12391 cad9998dfe5bf038975cb63b0fcee52f 313 Gene3D G3DSA:3.40.50.720 6 126 1.6E-31 T 13-10-2018 Y11_12391 cad9998dfe5bf038975cb63b0fcee52f 313 Gene3D G3DSA:3.30.360.10 127 313 4.4E-56 T 13-10-2018 Y11_03921 d7bc61854909099e682da505f51eecfc 115 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 30 110 28.33 T 13-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Y11_03921 d7bc61854909099e682da505f51eecfc 115 SUPERFAMILY SSF54736 30 114 5.75E-33 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Y11_03921 d7bc61854909099e682da505f51eecfc 115 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 32 111 8.8E-34 T 13-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 Y11_03921 d7bc61854909099e682da505f51eecfc 115 Gene3D G3DSA:3.30.1390.10 10 115 4.1E-47 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Y11_26611 b1cae47fbc4929774ac6e4d7d28273f2 309 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 306 3.1E-90 T 13-10-2018 IPR007296 Domain of unknown function DUF403 Y11_26881 af5b0e6ee627f58e493c7390df82e506 157 PIRSF PIRSF001013 1 157 1.4E-67 T 13-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 Y11_26881 af5b0e6ee627f58e493c7390df82e506 157 SUPERFAMILY SSF53933 51 156 7.65E-39 T 13-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 Y11_26881 af5b0e6ee627f58e493c7390df82e506 157 Pfam PF00545 ribonuclease 67 154 3.8E-25 T 13-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 Y11_26881 af5b0e6ee627f58e493c7390df82e506 157 Gene3D G3DSA:3.10.450.30 44 157 1.9E-45 T 13-10-2018 Y11_26881 af5b0e6ee627f58e493c7390df82e506 157 PRINTS PR00117 Barnase signature 115 134 1.4E-29 T 13-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 Y11_26881 af5b0e6ee627f58e493c7390df82e506 157 PRINTS PR00117 Barnase signature 74 91 1.4E-29 T 13-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 Y11_26881 af5b0e6ee627f58e493c7390df82e506 157 PRINTS PR00117 Barnase signature 137 155 1.4E-29 T 13-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 Y11_26881 af5b0e6ee627f58e493c7390df82e506 157 PRINTS PR00117 Barnase signature 94 112 1.4E-29 T 13-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 Y11_26881 af5b0e6ee627f58e493c7390df82e506 157 PRINTS PR00117 Barnase signature 54 71 1.4E-29 T 13-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 Y11_38481 8704c7fcf56b21d74f66c794953cd0b7 169 TIGRFAM TIGR00077 lspA: signal peptidase II 2 161 9.6E-53 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Y11_38481 8704c7fcf56b21d74f66c794953cd0b7 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.3E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Y11_38481 8704c7fcf56b21d74f66c794953cd0b7 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.3E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Y11_38481 8704c7fcf56b21d74f66c794953cd0b7 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.3E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Y11_38481 8704c7fcf56b21d74f66c794953cd0b7 169 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.439 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Y11_38481 8704c7fcf56b21d74f66c794953cd0b7 169 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Y11_38481 8704c7fcf56b21d74f66c794953cd0b7 169 Pfam PF01252 Signal peptidase (SPase) II 16 154 1.7E-38 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 433 453 9.4E-40 T 13-10-2018 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 9.4E-40 T 13-10-2018 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 9.4E-40 T 13-10-2018 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 9.4E-40 T 13-10-2018 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 9.4E-40 T 13-10-2018 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 9.4E-40 T 13-10-2018 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 426 9.4E-40 T 13-10-2018 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 9.4E-40 T 13-10-2018 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 9.4E-40 T 13-10-2018 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 2.0E-19 T 13-10-2018 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.0E-19 T 13-10-2018 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.0E-19 T 13-10-2018 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 2.0E-19 T 13-10-2018 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 2.0E-19 T 13-10-2018 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 Gene3D G3DSA:3.50.50.60 147 268 7.3E-96 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 PIRSF PIRSF000350 2 467 7.9E-58 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 8.2E-39 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 458 1.1E-17 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 Gene3D G3DSA:3.50.50.60 7 329 7.3E-96 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 SUPERFAMILY SSF55424 348 466 7.04E-25 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 Gene3D G3DSA:1.10.287.990 37 107 7.3E-96 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 Gene3D G3DSA:3.30.390.30 346 469 8.4E-43 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Y11_27971 0b0f0d7ea460324b5f8f1644eb55c20c 482 SUPERFAMILY SSF51905 1 365 1.3E-43 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_30461 b5bbf45ef548a3217719d10839e36f3f 207 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.9E-27 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_30461 b5bbf45ef548a3217719d10839e36f3f 207 PRINTS PR01703 Manganese superoxide dismutase signature 167 179 2.9E-27 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_30461 b5bbf45ef548a3217719d10839e36f3f 207 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.9E-27 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_30461 b5bbf45ef548a3217719d10839e36f3f 207 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.9E-27 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_30461 b5bbf45ef548a3217719d10839e36f3f 207 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 2.9E-27 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_30461 b5bbf45ef548a3217719d10839e36f3f 207 PIRSF PIRSF000349 1 207 4.3E-80 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_30461 b5bbf45ef548a3217719d10839e36f3f 207 Gene3D G3DSA:2.40.500.20 94 207 5.7E-50 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_30461 b5bbf45ef548a3217719d10839e36f3f 207 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 202 1.6E-41 T 13-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_30461 b5bbf45ef548a3217719d10839e36f3f 207 SUPERFAMILY SSF46609 1 90 4.98E-36 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_30461 b5bbf45ef548a3217719d10839e36f3f 207 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 169 176 - T 13-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_30461 b5bbf45ef548a3217719d10839e36f3f 207 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 2.3E-31 T 13-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_30461 b5bbf45ef548a3217719d10839e36f3f 207 Gene3D G3DSA:1.10.287.990 20 90 6.1E-31 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_30461 b5bbf45ef548a3217719d10839e36f3f 207 SUPERFAMILY SSF54719 95 206 2.36E-45 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Y11_15071 9dc8b1464f0eca4297e1e10e4b77b453 678 Gene3D G3DSA:3.40.50.300 301 655 1.6E-14 T 13-10-2018 Y11_15071 9dc8b1464f0eca4297e1e10e4b77b453 678 SUPERFAMILY SSF52540 361 650 6.6E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 SUPERFAMILY SSF55073 537 689 1.18E-45 T 13-10-2018 IPR029787 Nucleotide cyclase Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 SUPERFAMILY SSF55785 381 519 9.6E-19 T 13-10-2018 IPR035965 PAS domain superfamily Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 Gene3D G3DSA:3.30.450.20 268 393 1.3E-24 T 13-10-2018 Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 Pfam PF00989 PAS fold 402 518 1.5E-14 T 13-10-2018 IPR013767 PAS fold GO:0006355 Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 SMART SM00091 402 468 1.1E-8 T 13-10-2018 IPR000014 PAS domain Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 SMART SM00091 139 208 9.5E-4 T 13-10-2018 IPR000014 PAS domain Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 SMART SM00091 11 80 1.2E-6 T 13-10-2018 IPR000014 PAS domain Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 SMART SM00091 267 335 2.3E-4 T 13-10-2018 IPR000014 PAS domain Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 SMART SM00086 85 127 2.0 T 13-10-2018 IPR001610 PAC motif Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 SMART SM00086 483 521 46.0 T 13-10-2018 IPR001610 PAC motif Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 SMART SM00086 341 383 0.067 T 13-10-2018 IPR001610 PAC motif Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 SMART SM00086 213 255 0.07 T 13-10-2018 IPR001610 PAC motif Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 SMART SM00267 521 692 1.3E-55 T 13-10-2018 IPR000160 GGDEF domain Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 Gene3D G3DSA:3.30.70.270 521 692 4.6E-55 T 13-10-2018 Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 SUPERFAMILY SSF55785 251 378 4.71E-28 T 13-10-2018 IPR035965 PAS domain superfamily Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 Pfam PF13426 PAS domain 24 126 2.5E-13 T 13-10-2018 IPR000014 PAS domain Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 Pfam PF13426 PAS domain 279 382 4.7E-11 T 13-10-2018 IPR000014 PAS domain Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 133 1.5E-18 T 13-10-2018 IPR000014 PAS domain Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 390 5.2E-16 T 13-10-2018 IPR000014 PAS domain Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 262 1.6E-22 T 13-10-2018 IPR000014 PAS domain Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 399 528 7.7E-15 T 13-10-2018 IPR000014 PAS domain Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 Pfam PF00990 Diguanylate cyclase, GGDEF domain 532 688 8.2E-46 T 13-10-2018 IPR000160 GGDEF domain Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 Pfam PF08448 PAS fold 152 257 5.5E-14 T 13-10-2018 IPR013656 PAS fold-4 Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 SUPERFAMILY SSF55785 24 136 2.9E-23 T 13-10-2018 IPR035965 PAS domain superfamily Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 528 690 4.2E-43 T 13-10-2018 IPR000160 GGDEF domain Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 Gene3D G3DSA:3.30.450.20 142 267 2.9E-28 T 13-10-2018 Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 Gene3D G3DSA:3.30.450.20 8 141 1.3E-26 T 13-10-2018 Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 SUPERFAMILY SSF55785 152 263 7.63E-25 T 13-10-2018 IPR035965 PAS domain superfamily Y11_06241 5b9d5cb7eb29716b66688d1b888b45b7 693 Gene3D G3DSA:3.30.450.20 394 519 1.6E-22 T 13-10-2018 Y11_18061 a9f822c2af4e99da364779bd05e97f2d 151 SUPERFAMILY SSF54690 6 151 4.58E-54 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Y11_18061 a9f822c2af4e99da364779bd05e97f2d 151 Pfam PF02391 MoaE protein 15 122 2.1E-35 T 13-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Y11_18061 a9f822c2af4e99da364779bd05e97f2d 151 Gene3D G3DSA:3.90.1170.40 2 151 4.4E-55 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Y11_28901 ac559e942bcd36dcbb9de26c7e929b29 354 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 3.0E-80 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Y11_28901 ac559e942bcd36dcbb9de26c7e929b29 354 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 341 2.2E-161 T 13-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 Y11_28901 ac559e942bcd36dcbb9de26c7e929b29 354 Gene3D G3DSA:3.40.50.2000 163 347 2.5E-65 T 13-10-2018 Y11_28901 ac559e942bcd36dcbb9de26c7e929b29 354 Gene3D G3DSA:3.40.50.2000 1 151 1.1E-58 T 13-10-2018 Y11_28901 ac559e942bcd36dcbb9de26c7e929b29 354 SUPERFAMILY SSF53756 1 344 7.74E-100 T 13-10-2018 Y11_37531 c310926929adf326de126bbf0dbd3187 254 Pfam PF13391 HNH endonuclease 147 198 7.2E-9 T 13-10-2018 IPR003615 HNH nuclease Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 SUPERFAMILY SSF52540 10 277 7.66E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 SUPERFAMILY SSF50447 262 393 3.31E-29 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 Gene3D G3DSA:3.40.50.300 110 275 3.4E-117 T 13-10-2018 Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 8.8E-47 T 13-10-2018 IPR032090 Peptide chain release factor 3, C-terminal Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.202 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 SUPERFAMILY SSF54980 393 468 8.27E-17 T 13-10-2018 IPR035647 EF-G domain III/V-like Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 1.4E-45 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 Gene3D G3DSA:3.30.70.3280 390 529 7.9E-53 T 13-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 0.0 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 Gene3D G3DSA:3.40.50.300 72 379 3.4E-117 T 13-10-2018 Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 9.8E-12 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Y11_37991 343c1d7187e7d245f0b025ce0faf38cb 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 158 3.2E-18 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Y11_40601 6a0c34057d73170898a3532f44df25bd 718 Gene3D G3DSA:3.40.50.12780 194 614 2.8E-75 T 13-10-2018 Y11_40601 6a0c34057d73170898a3532f44df25bd 718 Pfam PF13193 AMP-binding enzyme C-terminal domain 637 701 1.6E-5 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Y11_40601 6a0c34057d73170898a3532f44df25bd 718 SUPERFAMILY SSF56801 215 714 3.01E-97 T 13-10-2018 Y11_40601 6a0c34057d73170898a3532f44df25bd 718 SUPERFAMILY SSF69593 10 167 3.66E-17 T 13-10-2018 Y11_40601 6a0c34057d73170898a3532f44df25bd 718 Pfam PF01553 Acyltransferase 24 136 3.0E-14 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Y11_40601 6a0c34057d73170898a3532f44df25bd 718 Gene3D G3DSA:3.30.300.30 616 715 9.0E-10 T 13-10-2018 Y11_40601 6a0c34057d73170898a3532f44df25bd 718 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 717 57.662 T 13-10-2018 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 Y11_40601 6a0c34057d73170898a3532f44df25bd 718 Pfam PF00501 AMP-binding enzyme 233 619 2.1E-65 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Y11_40601 6a0c34057d73170898a3532f44df25bd 718 SMART SM00563 30 140 6.4E-22 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Y11_40601 6a0c34057d73170898a3532f44df25bd 718 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 13-10-2018 IPR020845 AMP-binding, conserved site Y11_11571 97cae1b4ad7caedbbf079b3db26ed07e 90 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.677 T 13-10-2018 IPR027354 YcgL domain Y11_11571 97cae1b4ad7caedbbf079b3db26ed07e 90 Pfam PF05166 YcgL domain 3 75 1.7E-33 T 13-10-2018 IPR027354 YcgL domain Y11_11571 97cae1b4ad7caedbbf079b3db26ed07e 90 SUPERFAMILY SSF160191 1 87 1.7E-38 T 13-10-2018 IPR038068 YcgL-like superfamily Y11_11571 97cae1b4ad7caedbbf079b3db26ed07e 90 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 83 4.0E-41 T 13-10-2018 IPR027354 YcgL domain Y11_11571 97cae1b4ad7caedbbf079b3db26ed07e 90 Gene3D G3DSA:3.10.510.20 1 74 1.8E-31 T 13-10-2018 IPR038068 YcgL-like superfamily Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 SMART SM00322 552 617 3.3E-12 T 13-10-2018 IPR004087 K Homology domain GO:0003676 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 SUPERFAMILY SSF54791 554 621 2.72E-17 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 SUPERFAMILY SSF54211 5 144 7.59E-49 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 8.7E-26 T 13-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 PIRSF PIRSF005499 2 705 1.0E-298 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 Gene3D G3DSA:2.40.50.140 622 693 7.9E-29 T 13-10-2018 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 Pfam PF00575 S1 RNA binding domain 619 690 7.3E-22 T 13-10-2018 IPR003029 S1 domain GO:0003676 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 SUPERFAMILY SSF54211 293 488 4.71E-47 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 Gene3D G3DSA:3.30.230.70 4 235 5.3E-78 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 SUPERFAMILY SSF46915 238 320 2.62E-19 T 13-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 SMART SM00316 620 690 1.1E-26 T 13-10-2018 IPR022967 RNA-binding domain, S1 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 3.0E-18 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 9.1E-22 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 SUPERFAMILY SSF50249 608 692 4.45E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 SUPERFAMILY SSF55666 145 234 3.37E-30 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 Pfam PF00013 KH domain 556 614 5.6E-9 T 13-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 9.3E-14 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 8.7E-6 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.314 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 Gene3D G3DSA:3.30.230.70 236 549 5.3E-114 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 Gene3D G3DSA:3.30.1370.10 550 621 1.0E-18 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Y11_36751 903271d54bf10fbacd390dd9a34492a0 706 SUPERFAMILY SSF55666 450 548 5.33E-28 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Y11_18901 47d46f7a990ba400ca3fbca3af863f1b 95 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 88 6.7E-8 T 13-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Y11_36011 7cdd6ee457df94978307ff71bb4f63c6 1119 Gene3D G3DSA:2.30.30.60 949 998 1.1E-10 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Y11_36011 7cdd6ee457df94978307ff71bb4f63c6 1119 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 963 997 - T 13-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 Y11_36011 7cdd6ee457df94978307ff71bb4f63c6 1119 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 494 830 3.3E-117 T 13-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 Y11_36011 7cdd6ee457df94978307ff71bb4f63c6 1119 SUPERFAMILY SSF82861 849 932 2.09E-8 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Y11_36011 7cdd6ee457df94978307ff71bb4f63c6 1119 SUPERFAMILY SSF50182 934 999 9.81E-17 T 13-10-2018 IPR010920 LSM domain superfamily Y11_36011 7cdd6ee457df94978307ff71bb4f63c6 1119 SUPERFAMILY SSF82689 1001 1096 8.63E-15 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Y11_36011 7cdd6ee457df94978307ff71bb4f63c6 1119 Pfam PF12795 Mechanosensitive ion channel porin domain 43 272 6.2E-63 T 13-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain Y11_36011 7cdd6ee457df94978307ff71bb4f63c6 1119 Gene3D G3DSA:3.30.70.100 1002 1094 2.6E-8 T 13-10-2018 Y11_36011 7cdd6ee457df94978307ff71bb4f63c6 1119 Pfam PF00924 Mechanosensitive ion channel 891 1089 2.5E-52 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Y11_06681 f8a6f1c28f41b1c2942864bb7bcd4b3a 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 13-10-2018 Y11_06681 f8a6f1c28f41b1c2942864bb7bcd4b3a 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 5.6E-57 T 13-10-2018 Y11_06681 f8a6f1c28f41b1c2942864bb7bcd4b3a 272 Gene3D G3DSA:3.30.1240.10 83 189 7.2E-79 T 13-10-2018 Y11_06681 f8a6f1c28f41b1c2942864bb7bcd4b3a 272 Gene3D G3DSA:3.40.50.1000 4 255 7.2E-79 T 13-10-2018 IPR023214 HAD superfamily Y11_06681 f8a6f1c28f41b1c2942864bb7bcd4b3a 272 SUPERFAMILY SSF56784 1 264 5.35E-66 T 13-10-2018 IPR036412 HAD-like superfamily Y11_06681 f8a6f1c28f41b1c2942864bb7bcd4b3a 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 232 2.9E-18 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Y11_06681 f8a6f1c28f41b1c2942864bb7bcd4b3a 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 2.4E-56 T 13-10-2018 IPR000150 Cof family GO:0016787 Y11_39941 fbc04083052c1e4e53cfb390059781f0 249 SUPERFAMILY SSF51735 2 248 3.53E-74 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_39941 fbc04083052c1e4e53cfb390059781f0 249 Gene3D G3DSA:3.40.50.720 1 248 3.1E-79 T 13-10-2018 Y11_39941 fbc04083052c1e4e53cfb390059781f0 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Y11_39941 fbc04083052c1e4e53cfb390059781f0 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 248 1.8E-57 T 13-10-2018 Y11_39941 fbc04083052c1e4e53cfb390059781f0 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 184 0.0022 T 13-10-2018 Y11_39941 fbc04083052c1e4e53cfb390059781f0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 8.6E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_39941 fbc04083052c1e4e53cfb390059781f0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 8.6E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_39941 fbc04083052c1e4e53cfb390059781f0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 8.6E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_39941 fbc04083052c1e4e53cfb390059781f0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 8.6E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_39941 fbc04083052c1e4e53cfb390059781f0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 8.6E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_39941 fbc04083052c1e4e53cfb390059781f0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 8.6E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_39941 fbc04083052c1e4e53cfb390059781f0 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 8.9E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_39941 fbc04083052c1e4e53cfb390059781f0 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 8.9E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_39941 fbc04083052c1e4e53cfb390059781f0 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.9E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 Pfam PF00102 Protein-tyrosine phosphatase 226 456 3.0E-25 T 13-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 SMART SM00404 345 459 4.0E-17 T 13-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 Gene3D G3DSA:3.90.190.10 187 468 2.0E-68 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 PRINTS PR00700 Protein tyrosine phosphatase signature 398 416 2.4E-12 T 13-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 PRINTS PR00700 Protein tyrosine phosphatase signature 444 454 2.4E-12 T 13-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 PRINTS PR00700 Protein tyrosine phosphatase signature 344 361 2.4E-12 T 13-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 PRINTS PR00700 Protein tyrosine phosphatase signature 242 249 2.4E-12 T 13-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 PRINTS PR00700 Protein tyrosine phosphatase signature 256 276 2.4E-12 T 13-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 PRINTS PR00700 Protein tyrosine phosphatase signature 427 442 2.4E-12 T 13-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 PRINTS PR01371 Salmonella/Yersinia modular tyrosine phosphatase signature 252 265 2.8E-42 T 13-10-2018 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH GO:0004725|GO:0006470 Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 PRINTS PR01371 Salmonella/Yersinia modular tyrosine phosphatase signature 399 410 2.8E-42 T 13-10-2018 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH GO:0004725|GO:0006470 Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 PRINTS PR01371 Salmonella/Yersinia modular tyrosine phosphatase signature 104 122 2.8E-42 T 13-10-2018 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH GO:0004725|GO:0006470 Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 PRINTS PR01371 Salmonella/Yersinia modular tyrosine phosphatase signature 299 315 2.8E-42 T 13-10-2018 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH GO:0004725|GO:0006470 Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 PRINTS PR01371 Salmonella/Yersinia modular tyrosine phosphatase signature 342 356 2.8E-42 T 13-10-2018 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH GO:0004725|GO:0006470 Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 Pfam PF09013 YopH, N-terminal 3 123 3.3E-79 T 13-10-2018 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal GO:0004725|GO:0006470|GO:0009405 Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 SMART SM00194 193 463 9.5E-47 T 13-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 SUPERFAMILY SSF52799 194 457 5.31E-48 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 Gene3D G3DSA:3.30.1570.10 1 136 3.8E-73 T 13-10-2018 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 401 411 - T 13-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 Y11_p0541 a2c64febfcd230f91eacb13bba577942 468 SUPERFAMILY SSF64449 3 125 1.44E-55 T 13-10-2018 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily Y11_23361 1e047b8574589245b27618adf1fa17ac 273 PIRSF PIRSF000193 3 271 9.0E-74 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Y11_23361 1e047b8574589245b27618adf1fa17ac 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 4.1E-28 T 13-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Y11_23361 1e047b8574589245b27618adf1fa17ac 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 3.5E-69 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Y11_23361 1e047b8574589245b27618adf1fa17ac 273 SUPERFAMILY SSF48179 163 271 2.21E-27 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_23361 1e047b8574589245b27618adf1fa17ac 273 Gene3D G3DSA:3.40.50.720 2 165 1.3E-49 T 13-10-2018 Y11_23361 1e047b8574589245b27618adf1fa17ac 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 247 - T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Y11_23361 1e047b8574589245b27618adf1fa17ac 273 SUPERFAMILY SSF51735 4 162 1.63E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_23361 1e047b8574589245b27618adf1fa17ac 273 Gene3D G3DSA:1.10.3730.10 166 273 8.4E-33 T 13-10-2018 Y11_23361 1e047b8574589245b27618adf1fa17ac 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 100 4.2E-18 T 13-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Y11_23361 1e047b8574589245b27618adf1fa17ac 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 24.572 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Y11_20141 cb257a2cf726220ec0c5d03bdba22cea 395 Gene3D G3DSA:1.10.287.470 100 173 9.7E-113 T 13-10-2018 Y11_20141 cb257a2cf726220ec0c5d03bdba22cea 395 Gene3D G3DSA:2.40.50.100 65 209 9.7E-113 T 13-10-2018 Y11_20141 cb257a2cf726220ec0c5d03bdba22cea 395 Pfam PF00529 HlyD membrane-fusion protein of T1SS 42 361 7.3E-13 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Y11_20141 cb257a2cf726220ec0c5d03bdba22cea 395 SUPERFAMILY SSF111369 53 301 3.14E-88 T 13-10-2018 Y11_20141 cb257a2cf726220ec0c5d03bdba22cea 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 294 1.4E-10 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Y11_20141 cb257a2cf726220ec0c5d03bdba22cea 395 Gene3D G3DSA:2.40.30.170 53 304 9.7E-113 T 13-10-2018 Y11_20141 cb257a2cf726220ec0c5d03bdba22cea 395 Gene3D G3DSA:2.40.420.20 305 374 9.7E-113 T 13-10-2018 Y11_20141 cb257a2cf726220ec0c5d03bdba22cea 395 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 377 2.6E-78 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Y11_33951 bad04bab7d5b615df0c4a9ad47bfdabf 720 Gene3D G3DSA:1.10.486.10 382 538 1.1E-138 T 13-10-2018 Y11_33951 bad04bab7d5b615df0c4a9ad47bfdabf 720 Gene3D G3DSA:3.40.50.300 281 636 1.1E-138 T 13-10-2018 Y11_33951 bad04bab7d5b615df0c4a9ad47bfdabf 720 Gene3D G3DSA:3.40.50.300 10 274 1.9E-105 T 13-10-2018 Y11_33951 bad04bab7d5b615df0c4a9ad47bfdabf 720 Gene3D G3DSA:1.10.10.160 114 187 1.9E-105 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily Y11_33951 bad04bab7d5b615df0c4a9ad47bfdabf 720 SUPERFAMILY SSF52540 4 642 5.32E-182 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_33951 bad04bab7d5b615df0c4a9ad47bfdabf 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 8.6E-76 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Y11_33951 bad04bab7d5b615df0c4a9ad47bfdabf 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 6.6E-76 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Y11_33951 bad04bab7d5b615df0c4a9ad47bfdabf 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 13-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 Y11_38071 7d43236ceeb9ed14876772b71eb404b7 407 SUPERFAMILY SSF53649 1 407 2.86E-74 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Y11_38071 7d43236ceeb9ed14876772b71eb404b7 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 56.209 T 13-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Y11_38071 7d43236ceeb9ed14876772b71eb404b7 407 SUPERFAMILY SSF143856 117 235 1.31E-50 T 13-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Y11_38071 7d43236ceeb9ed14876772b71eb404b7 407 Gene3D G3DSA:3.30.70.1250 115 238 1.6E-158 T 13-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Y11_38071 7d43236ceeb9ed14876772b71eb404b7 407 PIRSF PIRSF001491 1 407 2.2E-168 T 13-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Y11_38071 7d43236ceeb9ed14876772b71eb404b7 407 Pfam PF01676 Metalloenzyme superfamily 2 398 6.3E-44 T 13-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Y11_38071 7d43236ceeb9ed14876772b71eb404b7 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 405 3.9E-197 T 13-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Y11_38071 7d43236ceeb9ed14876772b71eb404b7 407 Gene3D G3DSA:3.40.720.10 3 406 1.6E-158 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Y11_37961 cdf7fe23e09936154d38a875d084a4d4 347 Gene3D G3DSA:3.40.50.150 159 339 2.1E-45 T 13-10-2018 Y11_37961 cdf7fe23e09936154d38a875d084a4d4 347 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 44.929 T 13-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 Y11_37961 cdf7fe23e09936154d38a875d084a4d4 347 SUPERFAMILY SSF53335 154 315 1.46E-26 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_37961 cdf7fe23e09936154d38a875d084a4d4 347 Gene3D G3DSA:3.40.50.150 1 158 4.9E-58 T 13-10-2018 Y11_37961 cdf7fe23e09936154d38a875d084a4d4 347 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 1.4E-57 T 13-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 Y11_37961 cdf7fe23e09936154d38a875d084a4d4 347 Pfam PF05175 Methyltransferase small domain 167 333 1.6E-57 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Y11_37961 cdf7fe23e09936154d38a875d084a4d4 347 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Y11_24981 a90f1fa20b917472aa953a5e083d0943 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 4.5E-18 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Y11_24981 a90f1fa20b917472aa953a5e083d0943 476 Pfam PF01467 Cytidylyltransferase-like 345 469 1.0E-15 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Y11_24981 a90f1fa20b917472aa953a5e083d0943 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 2.2E-127 T 13-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Y11_24981 a90f1fa20b917472aa953a5e083d0943 476 Gene3D G3DSA:3.40.1190.20 2 309 4.6E-111 T 13-10-2018 IPR029056 Ribokinase-like Y11_24981 a90f1fa20b917472aa953a5e083d0943 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.233 T 13-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Y11_24981 a90f1fa20b917472aa953a5e083d0943 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 4.5E-63 T 13-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Y11_24981 a90f1fa20b917472aa953a5e083d0943 476 SUPERFAMILY SSF52374 340 470 2.22E-22 T 13-10-2018 Y11_24981 a90f1fa20b917472aa953a5e083d0943 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Y11_24981 a90f1fa20b917472aa953a5e083d0943 476 Gene3D G3DSA:3.40.50.620 319 475 1.0E-38 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_24981 a90f1fa20b917472aa953a5e083d0943 476 Pfam PF00294 pfkB family carbohydrate kinase 13 305 1.0E-52 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Y11_24981 a90f1fa20b917472aa953a5e083d0943 476 SUPERFAMILY SSF53613 12 310 2.96E-57 T 13-10-2018 IPR029056 Ribokinase-like Y11_06421 b70c5915a7ae1a32d33f0e7deddd9b23 102 PIRSF PIRSF029143 1 102 4.3E-49 T 13-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 Y11_06421 b70c5915a7ae1a32d33f0e7deddd9b23 102 Pfam PF04266 ASCH domain 6 98 1.4E-13 T 13-10-2018 IPR007374 ASCH domain Y11_06421 b70c5915a7ae1a32d33f0e7deddd9b23 102 SUPERFAMILY SSF88697 2 100 8.95E-33 T 13-10-2018 IPR015947 PUA-like superfamily Y11_06421 b70c5915a7ae1a32d33f0e7deddd9b23 102 SMART SM01022 5 101 3.7E-25 T 13-10-2018 IPR007374 ASCH domain Y11_06421 b70c5915a7ae1a32d33f0e7deddd9b23 102 Gene3D G3DSA:2.30.130.30 1 102 4.9E-44 T 13-10-2018 Y11_06421 b70c5915a7ae1a32d33f0e7deddd9b23 102 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 1 102 31.784 T 13-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 Y11_23451 d8d9055fa5f88e99fdb2e4ad03247327 380 Gene3D G3DSA:1.10.340.30 39 150 5.6E-88 T 13-10-2018 Y11_23451 d8d9055fa5f88e99fdb2e4ad03247327 380 Pfam PF00633 Helix-hairpin-helix motif 118 145 3.1E-9 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Y11_23451 d8d9055fa5f88e99fdb2e4ad03247327 380 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 210 226 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Y11_23451 d8d9055fa5f88e99fdb2e4ad03247327 380 Pfam PF14815 NUDIX domain 252 360 5.7E-24 T 13-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Y11_23451 d8d9055fa5f88e99fdb2e4ad03247327 380 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 210 226 6.2E-4 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Y11_23451 d8d9055fa5f88e99fdb2e4ad03247327 380 SMART SM00525 209 229 7.6E-5 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Y11_23451 d8d9055fa5f88e99fdb2e4ad03247327 380 SMART SM00478 57 208 3.4E-51 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Y11_23451 d8d9055fa5f88e99fdb2e4ad03247327 380 SUPERFAMILY SSF48150 21 243 3.3E-78 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Y11_23451 d8d9055fa5f88e99fdb2e4ad03247327 380 SUPERFAMILY SSF55811 238 362 4.3E-23 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Y11_23451 d8d9055fa5f88e99fdb2e4ad03247327 380 Gene3D G3DSA:1.10.1670.10 28 229 5.6E-88 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Y11_23451 d8d9055fa5f88e99fdb2e4ad03247327 380 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 54 185 7.9E-20 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Y11_23451 d8d9055fa5f88e99fdb2e4ad03247327 380 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 23 294 2.3E-122 T 13-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 Y11_23451 d8d9055fa5f88e99fdb2e4ad03247327 380 ProSitePatterns PS01155 Endonuclease III family signature. 120 149 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Y11_23451 d8d9055fa5f88e99fdb2e4ad03247327 380 Gene3D G3DSA:3.90.79.10 243 370 1.1E-11 T 13-10-2018 Y11_29971 cd387769b6f705399179a1378a6a71dc 338 Gene3D G3DSA:3.40.50.300 1 232 9.7E-71 T 13-10-2018 Y11_29971 cd387769b6f705399179a1378a6a71dc 338 Pfam PF09383 NIL domain 265 334 4.9E-18 T 13-10-2018 IPR018449 NIL domain Y11_29971 cd387769b6f705399179a1378a6a71dc 338 SUPERFAMILY SSF55021 249 337 3.55E-21 T 13-10-2018 Y11_29971 cd387769b6f705399179a1378a6a71dc 338 Gene3D G3DSA:3.30.70.260 233 337 5.9E-24 T 13-10-2018 Y11_29971 cd387769b6f705399179a1378a6a71dc 338 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_29971 cd387769b6f705399179a1378a6a71dc 338 Pfam PF00005 ABC transporter 21 169 8.1E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_29971 cd387769b6f705399179a1378a6a71dc 338 SMART SM00382 30 239 1.6E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_29971 cd387769b6f705399179a1378a6a71dc 338 SMART SM00930 262 337 2.9E-25 T 13-10-2018 IPR018449 NIL domain Y11_29971 cd387769b6f705399179a1378a6a71dc 338 SUPERFAMILY SSF52540 1 240 3.99E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_29521 99b5e2a723e0a5f89d0cc0514329b880 333 SMART SM00354 1 71 3.6E-35 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_29521 99b5e2a723e0a5f89d0cc0514329b880 333 SUPERFAMILY SSF47413 2 59 2.22E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_29521 99b5e2a723e0a5f89d0cc0514329b880 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.4E-20 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_29521 99b5e2a723e0a5f89d0cc0514329b880 333 Gene3D G3DSA:3.40.50.2300 161 323 2.5E-86 T 13-10-2018 Y11_29521 99b5e2a723e0a5f89d0cc0514329b880 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 Y11_29521 99b5e2a723e0a5f89d0cc0514329b880 333 Gene3D G3DSA:1.10.260.40 3 59 4.9E-24 T 13-10-2018 Y11_29521 99b5e2a723e0a5f89d0cc0514329b880 333 Pfam PF13377 Periplasmic binding protein-like domain 170 330 1.4E-46 T 13-10-2018 Y11_29521 99b5e2a723e0a5f89d0cc0514329b880 333 Gene3D G3DSA:3.40.50.2300 69 322 2.5E-86 T 13-10-2018 Y11_29521 99b5e2a723e0a5f89d0cc0514329b880 333 SUPERFAMILY SSF53822 60 331 2.19E-90 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_29521 99b5e2a723e0a5f89d0cc0514329b880 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.3E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_29521 99b5e2a723e0a5f89d0cc0514329b880 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.3E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_43181 521603f984659e37dcac0d67469197a0 256 Pfam PF00455 DeoR C terminal sensor domain 74 232 6.2E-51 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain Y11_43181 521603f984659e37dcac0d67469197a0 256 Gene3D G3DSA:1.10.10.10 1 58 6.6E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_43181 521603f984659e37dcac0d67469197a0 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Y11_43181 521603f984659e37dcac0d67469197a0 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 2.2E-18 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_43181 521603f984659e37dcac0d67469197a0 256 SMART SM00420 6 58 9.2E-19 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_43181 521603f984659e37dcac0d67469197a0 256 SUPERFAMILY SSF100950 73 233 1.07E-35 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_43181 521603f984659e37dcac0d67469197a0 256 SUPERFAMILY SSF46785 4 64 1.16E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_43181 521603f984659e37dcac0d67469197a0 256 SMART SM01134 72 233 1.9E-71 T 13-10-2018 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 1.5E-28 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 3.1E-119 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 Gene3D G3DSA:3.40.50.1370 135 292 1.7E-122 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.199 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 SUPERFAMILY SSF53671 3 306 2.35E-99 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 4.6E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.6E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 4.6E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 4.6E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 Gene3D G3DSA:3.40.50.1370 8 304 1.7E-122 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.8E-45 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.6E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.6E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.6E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.6E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.6E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Y11_26561 bb75cae30879bdceef03a0b953506e59 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.6E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Y11_24021 e28a0b5d71a7d6f5f612caf8e5443295 564 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 13-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Y11_24021 e28a0b5d71a7d6f5f612caf8e5443295 564 Gene3D G3DSA:1.10.645.10 1 549 1.5E-218 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_24021 e28a0b5d71a7d6f5f612caf8e5443295 564 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 540 549 - T 13-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Y11_24021 e28a0b5d71a7d6f5f612caf8e5443295 564 SUPERFAMILY SSF56762 1 549 2.49E-169 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_24021 e28a0b5d71a7d6f5f612caf8e5443295 564 Pfam PF00374 Nickel-dependent hydrogenase 39 549 1.5E-205 T 13-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Y11_34461 080753b598a7bed38b63f069e3149c07 295 SUPERFAMILY SSF161098 56 283 1.15E-49 T 13-10-2018 IPR035906 MetI-like superfamily Y11_34461 080753b598a7bed38b63f069e3149c07 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 293 1.4E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_34461 080753b598a7bed38b63f069e3149c07 295 Gene3D G3DSA:1.10.3720.10 52 293 3.6E-57 T 13-10-2018 IPR035906 MetI-like superfamily Y11_34251 fd8496f8440d27fba8676d8aa59ac89a 481 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 451 464 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Y11_34251 fd8496f8440d27fba8676d8aa59ac89a 481 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 206 478 65.497 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Y11_34251 fd8496f8440d27fba8676d8aa59ac89a 481 SMART SM00382 276 467 7.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_34251 fd8496f8440d27fba8676d8aa59ac89a 481 Gene3D G3DSA:1.20.120.140 180 476 7.3E-117 T 13-10-2018 Y11_34251 fd8496f8440d27fba8676d8aa59ac89a 481 SUPERFAMILY SSF47364 178 257 2.49E-22 T 13-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Y11_34251 fd8496f8440d27fba8676d8aa59ac89a 481 SUPERFAMILY SSF52540 274 477 1.25E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_34251 fd8496f8440d27fba8676d8aa59ac89a 481 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 206 477 5.2E-115 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Y11_34251 fd8496f8440d27fba8676d8aa59ac89a 481 Gene3D G3DSA:3.40.50.300 275 466 7.3E-117 T 13-10-2018 Y11_34251 fd8496f8440d27fba8676d8aa59ac89a 481 SMART SM00962 277 478 1.6E-122 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Y11_34251 fd8496f8440d27fba8676d8aa59ac89a 481 SMART SM00963 183 263 4.2E-25 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Y11_34251 fd8496f8440d27fba8676d8aa59ac89a 481 Pfam PF02881 SRP54-type protein, helical bundle domain 194 259 5.2E-13 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Y11_34251 fd8496f8440d27fba8676d8aa59ac89a 481 Pfam PF00448 SRP54-type protein, GTPase domain 277 477 3.8E-77 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Y11_08511 53e4bc6461000cb99b75747e262efa83 233 Pfam PF08543 Phosphomethylpyrimidine kinase 38 211 2.3E-16 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Y11_08511 53e4bc6461000cb99b75747e262efa83 233 Gene3D G3DSA:3.40.1190.20 1 233 2.7E-62 T 13-10-2018 IPR029056 Ribokinase-like Y11_08511 53e4bc6461000cb99b75747e262efa83 233 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 232 6.2E-90 T 13-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Y11_08511 53e4bc6461000cb99b75747e262efa83 233 SUPERFAMILY SSF53613 1 225 1.15E-53 T 13-10-2018 IPR029056 Ribokinase-like Y11_07721 96a958f68e61e530b00aab09aa45fe07 296 Pfam PF00005 ABC transporter 29 174 1.5E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_07721 96a958f68e61e530b00aab09aa45fe07 296 Gene3D G3DSA:3.40.50.300 10 250 2.0E-58 T 13-10-2018 Y11_07721 96a958f68e61e530b00aab09aa45fe07 296 SMART SM00382 36 222 5.9E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_07721 96a958f68e61e530b00aab09aa45fe07 296 SUPERFAMILY SSF52540 7 238 3.52E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_07721 96a958f68e61e530b00aab09aa45fe07 296 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_30721 acc4a81a63107520e3179a13d7a869cc 241 Gene3D G3DSA:3.40.50.300 61 241 4.9E-41 T 13-10-2018 Y11_30721 acc4a81a63107520e3179a13d7a869cc 241 SUPERFAMILY SSF52540 64 228 1.03E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_30721 acc4a81a63107520e3179a13d7a869cc 241 Pfam PF01695 IstB-like ATP binding protein 54 228 4.0E-55 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Y11_30721 acc4a81a63107520e3179a13d7a869cc 241 PIRSF PIRSF003073 1 241 2.8E-72 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Y11_30721 acc4a81a63107520e3179a13d7a869cc 241 SMART SM00382 97 229 1.5E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_01491 6dcbbac73670abbd9d28814d69cfb159 275 Gene3D G3DSA:3.30.1380.10 20 273 7.8E-100 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Y11_01491 6dcbbac73670abbd9d28814d69cfb159 275 PIRSF PIRSF018455 3 275 2.6E-117 T 13-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 Y11_01491 6dcbbac73670abbd9d28814d69cfb159 275 SUPERFAMILY SSF55166 21 271 2.12E-99 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Y11_01491 6dcbbac73670abbd9d28814d69cfb159 275 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 269 1.9E-95 T 13-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 Y11_16361 2cf8a5c827c237984a838182cc22a6f9 357 Gene3D G3DSA:3.40.640.10 34 259 3.2E-114 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_16361 2cf8a5c827c237984a838182cc22a6f9 357 SUPERFAMILY SSF53383 3 353 2.61E-74 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_16361 2cf8a5c827c237984a838182cc22a6f9 357 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 4 351 1.1E-100 T 13-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 Y11_16361 2cf8a5c827c237984a838182cc22a6f9 357 Gene3D G3DSA:3.90.1150.10 22 350 3.2E-114 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_16361 2cf8a5c827c237984a838182cc22a6f9 357 Pfam PF00155 Aminotransferase class I and II 21 349 2.0E-37 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_16361 2cf8a5c827c237984a838182cc22a6f9 357 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 210 223 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Y11_39201 80150b1049a5e7d5673890bd4c5fe39c 399 Gene3D G3DSA:1.20.81.30 251 361 1.1E-22 T 13-10-2018 Y11_39201 80150b1049a5e7d5673890bd4c5fe39c 399 Gene3D G3DSA:1.20.81.30 54 167 2.2E-27 T 13-10-2018 Y11_39201 80150b1049a5e7d5673890bd4c5fe39c 399 Pfam PF00482 Type II secretion system (T2SS), protein F 270 390 5.0E-28 T 13-10-2018 IPR018076 Type II secretion system F domain Y11_39201 80150b1049a5e7d5673890bd4c5fe39c 399 Pfam PF00482 Type II secretion system (T2SS), protein F 65 187 6.0E-26 T 13-10-2018 IPR018076 Type II secretion system F domain Y11_39201 80150b1049a5e7d5673890bd4c5fe39c 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 2.1E-17 T 13-10-2018 IPR003004 GspF/PilC family Y11_39201 80150b1049a5e7d5673890bd4c5fe39c 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 60 72 2.1E-17 T 13-10-2018 IPR003004 GspF/PilC family Y11_39201 80150b1049a5e7d5673890bd4c5fe39c 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 2.1E-17 T 13-10-2018 IPR003004 GspF/PilC family Y11_39201 80150b1049a5e7d5673890bd4c5fe39c 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 159 187 2.1E-17 T 13-10-2018 IPR003004 GspF/PilC family Y11_39201 80150b1049a5e7d5673890bd4c5fe39c 399 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 159 187 - T 13-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 Y11_02681 8cfcff0a9e44c94dc20492249567215b 354 Gene3D G3DSA:1.20.1250.20 171 352 5.1E-20 T 13-10-2018 Y11_02681 8cfcff0a9e44c94dc20492249567215b 354 Pfam PF07690 Major Facilitator Superfamily 5 293 7.3E-14 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_02681 8cfcff0a9e44c94dc20492249567215b 354 SUPERFAMILY SSF103473 3 347 1.44E-32 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_02681 8cfcff0a9e44c94dc20492249567215b 354 Gene3D G3DSA:1.20.1250.20 1 159 1.5E-12 T 13-10-2018 Y11_14521 8b661c678a7a3e74a3143e3539b21c65 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 13-10-2018 IPR025505 FHIPEP conserved site Y11_14521 8b661c678a7a3e74a3143e3539b21c65 692 Gene3D G3DSA:1.10.8.540 505 593 9.0E-30 T 13-10-2018 Y11_14521 8b661c678a7a3e74a3143e3539b21c65 692 Pfam PF00771 FHIPEP family 31 681 7.7E-268 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_14521 8b661c678a7a3e74a3143e3539b21c65 692 Gene3D G3DSA:1.10.490.80 596 689 6.6E-8 T 13-10-2018 Y11_14521 8b661c678a7a3e74a3143e3539b21c65 692 Gene3D G3DSA:3.40.30.60 361 504 2.6E-51 T 13-10-2018 Y11_14521 8b661c678a7a3e74a3143e3539b21c65 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 1.5E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_14521 8b661c678a7a3e74a3143e3539b21c65 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 1.5E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_14521 8b661c678a7a3e74a3143e3539b21c65 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 1.5E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_14521 8b661c678a7a3e74a3143e3539b21c65 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 1.5E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_14521 8b661c678a7a3e74a3143e3539b21c65 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 1.5E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_14521 8b661c678a7a3e74a3143e3539b21c65 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 1.5E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_14521 8b661c678a7a3e74a3143e3539b21c65 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 689 5.3E-280 T 13-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 Y11_14521 8b661c678a7a3e74a3143e3539b21c65 692 PIRSF PIRSF005419 15 692 3.7E-241 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_34281 ae33b100384ad505b00094cf1a727753 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 284 9.6E-130 T 13-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 Y11_34281 ae33b100384ad505b00094cf1a727753 285 PIRSF PIRSF000770 5 285 6.5E-33 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_34281 ae33b100384ad505b00094cf1a727753 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 54.296 T 13-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 Y11_34281 ae33b100384ad505b00094cf1a727753 285 Pfam PF00140 Sigma-70 factor, region 1.2 15 40 4.4E-7 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Y11_34281 ae33b100384ad505b00094cf1a727753 285 SUPERFAMILY SSF88946 12 122 7.06E-40 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Y11_34281 ae33b100384ad505b00094cf1a727753 285 Gene3D G3DSA:1.20.120.1810 2 122 1.9E-27 T 13-10-2018 Y11_34281 ae33b100384ad505b00094cf1a727753 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_34281 ae33b100384ad505b00094cf1a727753 285 SUPERFAMILY SSF88659 200 284 5.05E-19 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Y11_34281 ae33b100384ad505b00094cf1a727753 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 280 7.5E-35 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Y11_34281 ae33b100384ad505b00094cf1a727753 285 Gene3D G3DSA:1.10.10.10 214 284 2.9E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_34281 ae33b100384ad505b00094cf1a727753 285 Pfam PF04545 Sigma-70, region 4 229 280 3.2E-16 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Y11_34281 ae33b100384ad505b00094cf1a727753 285 Pfam PF04542 Sigma-70 region 2 53 122 3.3E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Y11_34281 ae33b100384ad505b00094cf1a727753 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 3.9E-19 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_34281 ae33b100384ad505b00094cf1a727753 285 PRINTS PR00046 Major sigma-70 factor signature 253 268 3.9E-19 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_34281 ae33b100384ad505b00094cf1a727753 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 3.9E-19 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_34281 ae33b100384ad505b00094cf1a727753 285 PRINTS PR00046 Major sigma-70 factor signature 268 279 3.9E-19 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_34281 ae33b100384ad505b00094cf1a727753 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_10731 7e725ee795c8ab4de8acfe32632696c3 316 Pfam PF02811 PHP domain 38 170 1.9E-8 T 13-10-2018 IPR004013 PHP domain GO:0003824 Y11_10731 7e725ee795c8ab4de8acfe32632696c3 316 SMART SM00481 37 104 3.7E-18 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Y11_10731 7e725ee795c8ab4de8acfe32632696c3 316 Gene3D G3DSA:1.10.150.650 132 203 1.8E-82 T 13-10-2018 Y11_10731 7e725ee795c8ab4de8acfe32632696c3 316 Gene3D G3DSA:3.20.20.140 38 284 1.8E-82 T 13-10-2018 Y11_10731 7e725ee795c8ab4de8acfe32632696c3 316 SUPERFAMILY SSF89550 36 309 1.55E-51 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Y11_05501 a3050ab4d64c5c274357b10d556d8da0 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.0E-7 T 13-10-2018 Y11_05501 a3050ab4d64c5c274357b10d556d8da0 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.0E-7 T 13-10-2018 Y11_05501 a3050ab4d64c5c274357b10d556d8da0 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.0E-7 T 13-10-2018 Y11_05501 a3050ab4d64c5c274357b10d556d8da0 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 1.1E-64 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Y11_05501 a3050ab4d64c5c274357b10d556d8da0 434 Gene3D G3DSA:3.50.50.100 1 409 6.1E-118 T 13-10-2018 Y11_05501 a3050ab4d64c5c274357b10d556d8da0 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 9.8E-16 T 13-10-2018 Y11_05501 a3050ab4d64c5c274357b10d556d8da0 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 9.8E-16 T 13-10-2018 Y11_05501 a3050ab4d64c5c274357b10d556d8da0 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 9.8E-16 T 13-10-2018 Y11_05501 a3050ab4d64c5c274357b10d556d8da0 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 9.8E-16 T 13-10-2018 Y11_05501 a3050ab4d64c5c274357b10d556d8da0 434 SUPERFAMILY SSF51905 3 339 3.44E-33 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_15841 7cddf44714f9970dd30046f435a04006 556 Pfam PF00691 OmpA family 442 540 4.1E-17 T 13-10-2018 IPR006665 OmpA-like domain Y11_15841 7cddf44714f9970dd30046f435a04006 556 PRINTS PR01021 OMPA domain signature 443 465 1.9E-7 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Y11_15841 7cddf44714f9970dd30046f435a04006 556 PRINTS PR01021 OMPA domain signature 490 506 1.9E-7 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Y11_15841 7cddf44714f9970dd30046f435a04006 556 PRINTS PR01021 OMPA domain signature 475 490 1.9E-7 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Y11_15841 7cddf44714f9970dd30046f435a04006 556 SUPERFAMILY SSF103088 438 549 4.19E-26 T 13-10-2018 IPR036737 OmpA-like domain superfamily Y11_15841 7cddf44714f9970dd30046f435a04006 556 Gene3D G3DSA:3.30.1330.60 419 554 3.2E-28 T 13-10-2018 IPR036737 OmpA-like domain superfamily Y11_p0621 07b31c658924c6b8dad75e677481df03 87 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 16 86 3.0E-26 T 13-10-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 Y11_p0621 07b31c658924c6b8dad75e677481df03 87 Gene3D G3DSA:1.20.58.90 7 86 1.1E-11 T 13-10-2018 Y11_p0621 07b31c658924c6b8dad75e677481df03 87 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 15 86 2.6E-31 T 13-10-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 Y11_p0621 07b31c658924c6b8dad75e677481df03 87 SUPERFAMILY SSF140129 12 82 3.92E-22 T 13-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 Y11_38621 e6a6e9fb83e792f40beb844fe7e9c521 434 SUPERFAMILY SSF54534 173 277 4.45E-28 T 13-10-2018 Y11_38621 e6a6e9fb83e792f40beb844fe7e9c521 434 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.265 T 13-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 Y11_38621 e6a6e9fb83e792f40beb844fe7e9c521 434 Gene3D G3DSA:3.10.50.40 283 385 3.9E-86 T 13-10-2018 Y11_38621 e6a6e9fb83e792f40beb844fe7e9c521 434 Gene3D G3DSA:1.10.4030.10 21 148 1.5E-44 T 13-10-2018 Y11_38621 e6a6e9fb83e792f40beb844fe7e9c521 434 Gene3D G3DSA:3.10.50.40 175 386 3.9E-86 T 13-10-2018 Y11_38621 e6a6e9fb83e792f40beb844fe7e9c521 434 Pfam PF00639 PPIC-type PPIASE domain 178 272 6.3E-20 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Y11_38621 e6a6e9fb83e792f40beb844fe7e9c521 434 Pfam PF00639 PPIC-type PPIASE domain 289 381 1.6E-25 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Y11_38621 e6a6e9fb83e792f40beb844fe7e9c521 434 Pfam PF09312 SurA N-terminal domain 25 142 9.5E-46 T 13-10-2018 IPR015391 SurA N-terminal Y11_38621 e6a6e9fb83e792f40beb844fe7e9c521 434 SUPERFAMILY SSF109998 25 201 8.63E-45 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Y11_38621 e6a6e9fb83e792f40beb844fe7e9c521 434 SUPERFAMILY SSF54534 283 385 3.21E-33 T 13-10-2018 Y11_27171 f9cf2b3a4d03992c76704bf8a375b1e9 344 SUPERFAMILY SSF56524 78 339 4.19E-92 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Y11_27171 f9cf2b3a4d03992c76704bf8a375b1e9 344 Pfam PF00174 Oxidoreductase molybdopterin binding domain 118 277 5.0E-28 T 13-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 Y11_27171 f9cf2b3a4d03992c76704bf8a375b1e9 344 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 16 344 55.337 T 13-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 Y11_27171 f9cf2b3a4d03992c76704bf8a375b1e9 344 Gene3D G3DSA:3.90.420.10 74 344 3.1E-121 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Y11_29301 bb0bc68e259042ea3c3e54daecd5ace9 145 SUPERFAMILY SSF69500 1 144 1.96E-56 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Y11_29301 bb0bc68e259042ea3c3e54daecd5ace9 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 2.5E-68 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Y11_29301 bb0bc68e259042ea3c3e54daecd5ace9 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.684 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Y11_29301 bb0bc68e259042ea3c3e54daecd5ace9 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 4.6E-53 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Y11_29301 bb0bc68e259042ea3c3e54daecd5ace9 145 Gene3D G3DSA:3.50.80.10 1 145 3.0E-56 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Y11_27801 4495bbb4af500127c8d60a52517adedf 1619 Pfam PF05860 haemagglutination activity domain 41 166 3.9E-30 T 13-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal Y11_27801 4495bbb4af500127c8d60a52517adedf 1619 SUPERFAMILY SSF51126 45 286 9.1E-51 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor Y11_27801 4495bbb4af500127c8d60a52517adedf 1619 Gene3D G3DSA:2.160.20.10 32 271 2.6E-76 T 13-10-2018 IPR012334 Pectin lyase fold Y11_27801 4495bbb4af500127c8d60a52517adedf 1619 Pfam PF13332 Haemagluttinin repeat 810 894 1.5E-5 T 13-10-2018 IPR025157 Hemagglutinin repeat Y11_27801 4495bbb4af500127c8d60a52517adedf 1619 Pfam PF13332 Haemagluttinin repeat 630 789 1.4E-17 T 13-10-2018 IPR025157 Hemagglutinin repeat Y11_27801 4495bbb4af500127c8d60a52517adedf 1619 Pfam PF13332 Haemagluttinin repeat 402 466 5.5E-8 T 13-10-2018 IPR025157 Hemagglutinin repeat Y11_27801 4495bbb4af500127c8d60a52517adedf 1619 Pfam PF13332 Haemagluttinin repeat 481 548 1.0E-4 T 13-10-2018 IPR025157 Hemagglutinin repeat Y11_27801 4495bbb4af500127c8d60a52517adedf 1619 Pfam PF13332 Haemagluttinin repeat 1213 1381 1.0E-25 T 13-10-2018 IPR025157 Hemagglutinin repeat Y11_27801 4495bbb4af500127c8d60a52517adedf 1619 Pfam PF13332 Haemagluttinin repeat 1039 1155 2.9E-12 T 13-10-2018 IPR025157 Hemagglutinin repeat Y11_27801 4495bbb4af500127c8d60a52517adedf 1619 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 66 158 1.2E-16 T 13-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal Y11_27801 4495bbb4af500127c8d60a52517adedf 1619 SMART SM00912 48 168 4.1E-46 T 13-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal Y11_34061 896bd12783330bce1e98ae6de4e6fa4a 351 Gene3D G3DSA:3.40.50.1820 27 337 4.6E-44 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_34061 896bd12783330bce1e98ae6de4e6fa4a 351 SUPERFAMILY SSF53474 35 329 8.71E-36 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_34061 896bd12783330bce1e98ae6de4e6fa4a 351 Pfam PF12146 Serine aminopeptidase, S33 54 314 5.1E-56 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 Y11_01801 8b64d16a41745a8695f5d95fb15695af 303 Pfam PF01039 Carboxyl transferase domain 92 239 1.4E-18 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Y11_01801 8b64d16a41745a8695f5d95fb15695af 303 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 3.7E-148 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Y11_01801 8b64d16a41745a8695f5d95fb15695af 303 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-36 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Y11_01801 8b64d16a41745a8695f5d95fb15695af 303 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-36 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Y11_01801 8b64d16a41745a8695f5d95fb15695af 303 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-36 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Y11_01801 8b64d16a41745a8695f5d95fb15695af 303 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-36 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Y11_01801 8b64d16a41745a8695f5d95fb15695af 303 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-36 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Y11_01801 8b64d16a41745a8695f5d95fb15695af 303 Gene3D G3DSA:3.90.226.10 25 287 9.0E-89 T 13-10-2018 Y11_01801 8b64d16a41745a8695f5d95fb15695af 303 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 38.351 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Y11_01801 8b64d16a41745a8695f5d95fb15695af 303 SUPERFAMILY SSF52096 25 283 1.15E-87 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Y11_39811 fdb2d8a79fcb2f26fd98e608e658f791 545 Pfam PF06418 CTP synthase N-terminus 5 266 7.9E-126 T 13-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Y11_39811 fdb2d8a79fcb2f26fd98e608e658f791 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.149 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Y11_39811 fdb2d8a79fcb2f26fd98e608e658f791 545 SUPERFAMILY SSF52540 3 269 4.25E-122 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_39811 fdb2d8a79fcb2f26fd98e608e658f791 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 2.4E-263 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Y11_39811 fdb2d8a79fcb2f26fd98e608e658f791 545 Gene3D G3DSA:3.40.50.880 287 545 3.4E-106 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_39811 fdb2d8a79fcb2f26fd98e608e658f791 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 3.7E-63 T 13-10-2018 IPR017926 Glutamine amidotransferase Y11_39811 fdb2d8a79fcb2f26fd98e608e658f791 545 Gene3D G3DSA:3.40.50.300 1 285 8.0E-136 T 13-10-2018 Y11_39811 fdb2d8a79fcb2f26fd98e608e658f791 545 SUPERFAMILY SSF52317 289 541 7.34E-88 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_09071 e4091ad2a70b0fe16979ded16396a946 463 PIRSF PIRSF006060 1 462 9.6E-49 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_09071 e4091ad2a70b0fe16979ded16396a946 463 Gene3D G3DSA:1.20.1740.10 1 446 2.4E-56 T 13-10-2018 Y11_09071 e4091ad2a70b0fe16979ded16396a946 463 Pfam PF13520 Amino acid permease 5 416 3.0E-73 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_09071 e4091ad2a70b0fe16979ded16396a946 463 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 462 9.2E-170 T 13-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 Y11_30651 7369ccf19cd81194b8140781649f1178 302 SUPERFAMILY SSF46689 194 242 5.64E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_30651 7369ccf19cd81194b8140781649f1178 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 263 278 3.6E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_30651 7369ccf19cd81194b8140781649f1178 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 278 294 3.6E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_30651 7369ccf19cd81194b8140781649f1178 302 SMART SM00342 211 294 2.8E-27 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_30651 7369ccf19cd81194b8140781649f1178 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 248 290 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Y11_30651 7369ccf19cd81194b8140781649f1178 302 SUPERFAMILY SSF46689 248 297 2.21E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_30651 7369ccf19cd81194b8140781649f1178 302 Gene3D G3DSA:1.10.10.60 191 300 2.4E-28 T 13-10-2018 Y11_30651 7369ccf19cd81194b8140781649f1178 302 SUPERFAMILY SSF53822 2 209 7.28E-33 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_30651 7369ccf19cd81194b8140781649f1178 302 Gene3D G3DSA:3.40.50.2300 7 152 7.6E-30 T 13-10-2018 Y11_30651 7369ccf19cd81194b8140781649f1178 302 Pfam PF12833 Helix-turn-helix domain 219 294 1.1E-16 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_30651 7369ccf19cd81194b8140781649f1178 302 Pfam PF13377 Periplasmic binding protein-like domain 18 187 7.2E-34 T 13-10-2018 Y11_00011 0a1a040c03332e31bdf7b6567fe8d5c5 117 SUPERFAMILY SSF52833 3 117 5.66E-36 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_00011 0a1a040c03332e31bdf7b6567fe8d5c5 117 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 117 7.0E-48 T 13-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 Y11_00011 0a1a040c03332e31bdf7b6567fe8d5c5 117 Gene3D G3DSA:3.40.30.10 1 117 1.1E-50 T 13-10-2018 Y11_00011 0a1a040c03332e31bdf7b6567fe8d5c5 117 Pfam PF03960 ArsC family 7 116 4.8E-22 T 13-10-2018 IPR006660 Arsenate reductase-like Y11_39591 2563084433a8313e8ed7233923073938 185 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 13 181 3.4E-34 T 13-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Y11_39591 2563084433a8313e8ed7233923073938 185 Pfam PF13563 2'-5' RNA ligase superfamily 21 138 6.8E-11 T 13-10-2018 Y11_39591 2563084433a8313e8ed7233923073938 185 Gene3D G3DSA:3.90.1140.10 9 182 1.2E-47 T 13-10-2018 Y11_39591 2563084433a8313e8ed7233923073938 185 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 12 181 21.421 T 13-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Y11_39591 2563084433a8313e8ed7233923073938 185 SUPERFAMILY SSF55144 12 182 4.71E-42 T 13-10-2018 IPR009097 Cyclic phosphodiesterase Y11_39621 3c1c3d8c46db9c2d6720f380a39bfe7c 264 SUPERFAMILY SSF52540 11 237 1.96E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_39621 3c1c3d8c46db9c2d6720f380a39bfe7c 264 SMART SM00382 35 223 1.8E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_39621 3c1c3d8c46db9c2d6720f380a39bfe7c 264 Pfam PF00005 ABC transporter 26 175 4.8E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_39621 3c1c3d8c46db9c2d6720f380a39bfe7c 264 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_39621 3c1c3d8c46db9c2d6720f380a39bfe7c 264 Gene3D G3DSA:3.40.50.300 2 256 2.6E-68 T 13-10-2018 Y11_16391 843156a033d0c1a51d76ebbf980398d9 493 Pfam PF00005 ABC transporter 269 423 3.0E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_16391 843156a033d0c1a51d76ebbf980398d9 493 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_16391 843156a033d0c1a51d76ebbf980398d9 493 SUPERFAMILY SSF52540 268 477 1.64E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_16391 843156a033d0c1a51d76ebbf980398d9 493 Pfam PF00005 ABC transporter 20 169 2.6E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_16391 843156a033d0c1a51d76ebbf980398d9 493 Gene3D G3DSA:3.40.50.300 255 490 6.4E-44 T 13-10-2018 Y11_16391 843156a033d0c1a51d76ebbf980398d9 493 Gene3D G3DSA:3.40.50.300 1 235 1.2E-54 T 13-10-2018 Y11_16391 843156a033d0c1a51d76ebbf980398d9 493 SUPERFAMILY SSF52540 3 228 7.84E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_16391 843156a033d0c1a51d76ebbf980398d9 493 SMART SM00382 29 217 2.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_16391 843156a033d0c1a51d76ebbf980398d9 493 SMART SM00382 277 480 5.2E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_34411 4f19f403da018ceccc0387228f06057f 725 Pfam PF16967 E-set like domain 217 285 8.8E-23 T 13-10-2018 IPR032636 Pilus assembly protein, E-set like domain Y11_06751 b916b018dac20ee7cc2eecffb3c180b2 558 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 482 6.0E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_06751 b916b018dac20ee7cc2eecffb3c180b2 558 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 496 6.0E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_06751 b916b018dac20ee7cc2eecffb3c180b2 558 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 6.0E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_06751 b916b018dac20ee7cc2eecffb3c180b2 558 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 6.0E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_06751 b916b018dac20ee7cc2eecffb3c180b2 558 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 433 536 2.8E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_06751 b916b018dac20ee7cc2eecffb3c180b2 558 SUPERFAMILY SSF55874 407 534 2.51E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_06751 b916b018dac20ee7cc2eecffb3c180b2 558 SUPERFAMILY SSF55785 220 321 5.14E-6 T 13-10-2018 IPR035965 PAS domain superfamily Y11_06751 b916b018dac20ee7cc2eecffb3c180b2 558 Pfam PF17203 Single cache domain 3 43 178 6.0E-21 T 13-10-2018 IPR033463 Single cache domain 3 Y11_06751 b916b018dac20ee7cc2eecffb3c180b2 558 Pfam PF00989 PAS fold 222 322 3.1E-8 T 13-10-2018 IPR013767 PAS fold GO:0006355 Y11_06751 b916b018dac20ee7cc2eecffb3c180b2 558 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 334 383 4.7E-11 T 13-10-2018 IPR039506 SpoOB, alpha-helical domain Y11_06751 b916b018dac20ee7cc2eecffb3c180b2 558 SMART SM00387 429 537 3.4E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_06751 b916b018dac20ee7cc2eecffb3c180b2 558 Gene3D G3DSA:3.30.450.20 40 180 2.3E-39 T 13-10-2018 Y11_06751 b916b018dac20ee7cc2eecffb3c180b2 558 Gene3D G3DSA:3.30.565.10 385 532 2.1E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_06751 b916b018dac20ee7cc2eecffb3c180b2 558 Gene3D G3DSA:3.30.450.20 207 324 1.7E-23 T 13-10-2018 Y11_06751 b916b018dac20ee7cc2eecffb3c180b2 558 SUPERFAMILY SSF103190 46 177 6.28E-37 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Y11_38861 3be0eb1d7f2289084acbfb1dd7423ad1 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 4.4E-37 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Y11_38861 3be0eb1d7f2289084acbfb1dd7423ad1 520 Gene3D G3DSA:1.10.238.260 280 392 3.4E-33 T 13-10-2018 Y11_38861 3be0eb1d7f2289084acbfb1dd7423ad1 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 4.4E-252 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Y11_38861 3be0eb1d7f2289084acbfb1dd7423ad1 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Y11_38861 3be0eb1d7f2289084acbfb1dd7423ad1 520 Pfam PF00682 HMGL-like 4 273 2.7E-106 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Y11_38861 3be0eb1d7f2289084acbfb1dd7423ad1 520 Gene3D G3DSA:3.30.160.270 393 501 7.6E-12 T 13-10-2018 Y11_38861 3be0eb1d7f2289084acbfb1dd7423ad1 520 SUPERFAMILY SSF110921 391 499 7.72E-26 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Y11_38861 3be0eb1d7f2289084acbfb1dd7423ad1 520 SUPERFAMILY SSF51569 1 291 1.21E-100 T 13-10-2018 Y11_38861 3be0eb1d7f2289084acbfb1dd7423ad1 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 43.387 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Y11_38861 3be0eb1d7f2289084acbfb1dd7423ad1 520 Gene3D G3DSA:3.20.20.70 1 277 3.9E-108 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_38861 3be0eb1d7f2289084acbfb1dd7423ad1 520 SMART SM00917 369 500 6.2E-39 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Y11_38861 3be0eb1d7f2289084acbfb1dd7423ad1 520 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Y11_07541 fb6c28221e23177b47c9b124124d77b6 375 SUPERFAMILY SSF52540 6 247 2.02E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_07541 fb6c28221e23177b47c9b124124d77b6 375 SUPERFAMILY SSF50331 243 373 1.41E-21 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Y11_07541 fb6c28221e23177b47c9b124124d77b6 375 Gene3D G3DSA:3.40.50.300 4 227 7.2E-60 T 13-10-2018 Y11_07541 fb6c28221e23177b47c9b124124d77b6 375 SMART SM00382 29 217 2.0E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_07541 fb6c28221e23177b47c9b124124d77b6 375 Pfam PF00005 ABC transporter 21 162 7.8E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_07541 fb6c28221e23177b47c9b124124d77b6 375 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_07541 fb6c28221e23177b47c9b124124d77b6 375 Gene3D G3DSA:2.40.50.940 228 366 7.8E-25 T 13-10-2018 Y11_07541 fb6c28221e23177b47c9b124124d77b6 375 Pfam PF08402 TOBE domain 289 365 1.2E-4 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Y11_07541 fb6c28221e23177b47c9b124124d77b6 375 Gene3D G3DSA:2.40.50.140 295 357 7.8E-25 T 13-10-2018 Y11_23911 cb5197e7f90827081973a6198fdbc7be 227 Pfam PF11769 Protein of unknown function (DUF3313) 18 213 1.2E-49 T 13-10-2018 IPR021747 Protein of unknown function DUF3313 Y11_25021 b0cbd97248e68fadbde2338f024de28e 412 SUPERFAMILY SSF81301 1 119 4.8E-30 T 13-10-2018 Y11_25021 b0cbd97248e68fadbde2338f024de28e 412 Pfam PF01966 HD domain 229 327 3.5E-13 T 13-10-2018 IPR006674 HD domain Y11_25021 b0cbd97248e68fadbde2338f024de28e 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 46.379 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 Y11_25021 b0cbd97248e68fadbde2338f024de28e 412 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.3 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 Y11_25021 b0cbd97248e68fadbde2338f024de28e 412 PIRSF PIRSF000813 1 408 4.5E-201 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 Y11_25021 b0cbd97248e68fadbde2338f024de28e 412 Gene3D G3DSA:1.10.3090.10 122 410 2.9E-42 T 13-10-2018 Y11_25021 b0cbd97248e68fadbde2338f024de28e 412 Gene3D G3DSA:3.30.460.10 1 121 1.5E-27 T 13-10-2018 Y11_25021 b0cbd97248e68fadbde2338f024de28e 412 SMART SM00471 224 359 0.0014 T 13-10-2018 IPR003607 HD/PDEase domain Y11_25021 b0cbd97248e68fadbde2338f024de28e 412 SUPERFAMILY SSF81891 120 407 5.1E-55 T 13-10-2018 Y11_25021 b0cbd97248e68fadbde2338f024de28e 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 211 1.7E-13 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Y11_25021 b0cbd97248e68fadbde2338f024de28e 412 Pfam PF01743 Poly A polymerase head domain 3 122 1.4E-17 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Y11_11661 4315ab42b4e1d663341489d6f6c9aafb 634 SUPERFAMILY SSF52540 40 596 8.11E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_11661 4315ab42b4e1d663341489d6f6c9aafb 634 SMART SM00491 474 603 2.4E-54 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Y11_11661 4315ab42b4e1d663341489d6f6c9aafb 634 Pfam PF13307 Helicase C-terminal domain 459 616 3.4E-34 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Y11_11661 4315ab42b4e1d663341489d6f6c9aafb 634 Gene3D G3DSA:3.40.50.300 18 283 7.1E-46 T 13-10-2018 Y11_11661 4315ab42b4e1d663341489d6f6c9aafb 634 Gene3D G3DSA:3.40.50.300 440 632 6.5E-36 T 13-10-2018 Y11_11661 4315ab42b4e1d663341489d6f6c9aafb 634 SUPERFAMILY SSF52540 13 232 1.52E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_11661 4315ab42b4e1d663341489d6f6c9aafb 634 SMART SM00487 16 342 0.0077 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Y11_11661 4315ab42b4e1d663341489d6f6c9aafb 634 Pfam PF06733 DEAD_2 181 247 6.5E-5 T 13-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 Y11_02701 8a5054dd085d6d0346ba954735535928 90 Pfam PF13533 Biotin-lipoyl like 46 77 8.4E-8 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Y11_02701 8a5054dd085d6d0346ba954735535928 90 Gene3D G3DSA:2.40.50.100 38 72 3.6E-8 T 13-10-2018 Y11_02701 8a5054dd085d6d0346ba954735535928 90 Gene3D G3DSA:1.10.287.470 73 88 3.6E-8 T 13-10-2018 Y11_02701 8a5054dd085d6d0346ba954735535928 90 SUPERFAMILY SSF111369 48 87 1.83E-6 T 13-10-2018 Y11_02701 8a5054dd085d6d0346ba954735535928 90 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 9 32 3.7E-8 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_02701 8a5054dd085d6d0346ba954735535928 90 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 51 71 3.7E-8 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_12101 8b302d6d26c17ab70e4d847395af3a02 228 SMART SM00869 2 226 1.2E-9 T 13-10-2018 IPR005546 Autotransporter beta-domain Y11_12101 8b302d6d26c17ab70e4d847395af3a02 228 Gene3D G3DSA:2.40.128.130 10 228 1.5E-46 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Y11_12101 8b302d6d26c17ab70e4d847395af3a02 228 Pfam PF03797 Autotransporter beta-domain 57 215 2.5E-29 T 13-10-2018 IPR005546 Autotransporter beta-domain Y11_12101 8b302d6d26c17ab70e4d847395af3a02 228 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 57 223 2.7E-39 T 13-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 Y11_12101 8b302d6d26c17ab70e4d847395af3a02 228 SUPERFAMILY SSF51126 6 68 2.07E-6 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor Y11_12101 8b302d6d26c17ab70e4d847395af3a02 228 SUPERFAMILY SSF103515 54 222 1.15E-25 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Y11_18181 f84596c2e6029d23d7b29e268efee241 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.452 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Y11_18181 f84596c2e6029d23d7b29e268efee241 350 SMART SM00729 43 255 6.7E-41 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Y11_18181 f84596c2e6029d23d7b29e268efee241 350 Pfam PF04055 Radical SAM superfamily 50 202 4.3E-17 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_18181 f84596c2e6029d23d7b29e268efee241 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 1.2E-20 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Y11_18181 f84596c2e6029d23d7b29e268efee241 350 SMART SM00876 220 312 2.1E-49 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Y11_18181 f84596c2e6029d23d7b29e268efee241 350 Gene3D G3DSA:3.20.20.70 5 315 4.5E-136 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_18181 f84596c2e6029d23d7b29e268efee241 350 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 1.3E-125 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Y11_18181 f84596c2e6029d23d7b29e268efee241 350 SUPERFAMILY SSF102114 6 313 7.85E-95 T 13-10-2018 Y11_18181 f84596c2e6029d23d7b29e268efee241 350 PIRSF PIRSF001619 1 319 1.8E-139 T 13-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Y11_28041 d407b9fc02a82af95e2907955240a6c6 206 Gene3D G3DSA:3.30.1500.10 1 194 9.5E-79 T 13-10-2018 IPR036912 Haem-binding HasA superfamily Y11_28041 d407b9fc02a82af95e2907955240a6c6 206 SUPERFAMILY SSF54621 2 176 1.7E-40 T 13-10-2018 IPR036912 Haem-binding HasA superfamily Y11_28041 d407b9fc02a82af95e2907955240a6c6 206 Pfam PF06438 Heme-binding protein A (HasA) 1 206 3.7E-74 T 13-10-2018 IPR010495 Haem-binding HasA Y11_39231 015991455556ccf0aa6079a768b13bf5 302 PIRSF PIRSF006250 17 302 7.8E-105 T 13-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 Y11_39231 015991455556ccf0aa6079a768b13bf5 302 Gene3D G3DSA:3.20.20.70 139 291 1.8E-116 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_39231 015991455556ccf0aa6079a768b13bf5 302 SUPERFAMILY SSF54675 14 129 3.92E-31 T 13-10-2018 Y11_39231 015991455556ccf0aa6079a768b13bf5 302 SUPERFAMILY SSF51690 130 301 2.55E-57 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Y11_39231 015991455556ccf0aa6079a768b13bf5 302 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 300 5.3E-60 T 13-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Y11_39231 015991455556ccf0aa6079a768b13bf5 302 Gene3D G3DSA:3.90.1170.20 21 300 1.8E-116 T 13-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Y11_39231 015991455556ccf0aa6079a768b13bf5 302 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 301 5.2E-98 T 13-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 Y11_39231 015991455556ccf0aa6079a768b13bf5 302 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 128 2.8E-25 T 13-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Y11_01241 76b813db3f6384209cbb029a6df10654 476 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 13-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site Y11_01241 76b813db3f6384209cbb029a6df10654 476 Pfam PF00232 Glycosyl hydrolase family 1 4 472 9.4E-136 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_01241 76b813db3f6384209cbb029a6df10654 476 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site Y11_01241 76b813db3f6384209cbb029a6df10654 476 SUPERFAMILY SSF51445 5 473 3.42E-161 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_01241 76b813db3f6384209cbb029a6df10654 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 3.0E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_01241 76b813db3f6384209cbb029a6df10654 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 3.0E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_01241 76b813db3f6384209cbb029a6df10654 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 3.0E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_01241 76b813db3f6384209cbb029a6df10654 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 437 449 3.0E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_01241 76b813db3f6384209cbb029a6df10654 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 412 429 3.0E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_01241 76b813db3f6384209cbb029a6df10654 476 Gene3D G3DSA:3.20.20.80 1 475 1.3E-155 T 13-10-2018 Y11_41051 b80f99fc11f02172c8c18180123f9c43 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 3.8E-78 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Y11_41051 b80f99fc11f02172c8c18180123f9c43 185 Gene3D G3DSA:1.10.132.20 12 182 5.6E-69 T 13-10-2018 Y11_41051 b80f99fc11f02172c8c18180123f9c43 185 Gene3D G3DSA:3.30.1360.40 31 105 5.6E-69 T 13-10-2018 Y11_41051 b80f99fc11f02172c8c18180123f9c43 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.475 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Y11_41051 b80f99fc11f02172c8c18180123f9c43 185 Pfam PF01765 Ribosome recycling factor 20 183 3.4E-62 T 13-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Y11_41051 b80f99fc11f02172c8c18180123f9c43 185 SUPERFAMILY SSF55194 2 184 1.19E-69 T 13-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Y11_29941 3a88adf26b457a8b0e37e3ce4edd841f 190 Gene3D G3DSA:3.40.50.360 3 190 2.7E-59 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_29941 3a88adf26b457a8b0e37e3ce4edd841f 190 Pfam PF03358 NADPH-dependent FMN reductase 7 149 1.6E-36 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Y11_29941 3a88adf26b457a8b0e37e3ce4edd841f 190 SUPERFAMILY SSF52218 7 180 1.39E-42 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_36761 e32289c3fdf02421ff85b378258b0c35 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.033 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_36761 e32289c3fdf02421ff85b378258b0c35 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.3E-5 T 13-10-2018 IPR013105 Tetratricopeptide repeat 2 Y11_36761 e32289c3fdf02421ff85b378258b0c35 294 SMART SM00028 96 129 2.0E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_36761 e32289c3fdf02421ff85b378258b0c35 294 SMART SM00028 62 95 0.0033 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_36761 e32289c3fdf02421ff85b378258b0c35 294 Gene3D G3DSA:1.25.40.10 20 294 5.1E-118 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_36761 e32289c3fdf02421ff85b378258b0c35 294 SUPERFAMILY SSF48452 27 283 7.85E-76 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_36761 e32289c3fdf02421ff85b378258b0c35 294 PIRSF PIRSF004654 1 292 6.4E-117 T 13-10-2018 IPR023605 Lipoprotein NlpI Y11_18701 74ce4a9a69b9ffb99289329d9cd19920 321 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 24 281 1.0E-88 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Y11_18701 74ce4a9a69b9ffb99289329d9cd19920 321 Gene3D G3DSA:2.40.100.10 170 309 2.7E-55 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily Y11_18701 74ce4a9a69b9ffb99289329d9cd19920 321 SMART SM00797 23 298 1.6E-139 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Y11_18701 74ce4a9a69b9ffb99289329d9cd19920 321 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 306 5.2E-119 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Y11_18701 74ce4a9a69b9ffb99289329d9cd19920 321 SUPERFAMILY SSF50891 173 288 6.07E-12 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily Y11_41641 a35dcca58b7a93f0c331dad9ccd67961 299 Gene3D G3DSA:1.10.10.60 188 240 5.4E-8 T 13-10-2018 Y11_41641 a35dcca58b7a93f0c331dad9ccd67961 299 Gene3D G3DSA:1.10.10.60 241 296 9.0E-18 T 13-10-2018 Y11_41641 a35dcca58b7a93f0c331dad9ccd67961 299 SMART SM00342 207 290 6.9E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_41641 a35dcca58b7a93f0c331dad9ccd67961 299 Pfam PF12833 Helix-turn-helix domain 213 291 2.6E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_41641 a35dcca58b7a93f0c331dad9ccd67961 299 SUPERFAMILY SSF46689 243 293 1.21E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_26191 8d6cb23747f576d66ac91e5e1f502edf 191 SMART SM00749 51 114 4.0E-8 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Y11_26191 8d6cb23747f576d66ac91e5e1f502edf 191 SMART SM00749 129 190 0.0021 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Y11_26191 8d6cb23747f576d66ac91e5e1f502edf 191 Pfam PF04972 BON domain 125 190 3.1E-17 T 13-10-2018 IPR007055 BON domain Y11_26191 8d6cb23747f576d66ac91e5e1f502edf 191 Pfam PF04972 BON domain 46 114 1.1E-13 T 13-10-2018 IPR007055 BON domain Y11_10331 bda334127ffe41bc2b82f13acacb801e 411 Gene3D G3DSA:1.20.1270.60 147 384 4.4E-5 T 13-10-2018 IPR027267 AH/BAR domain superfamily Y11_10331 bda334127ffe41bc2b82f13acacb801e 411 SUPERFAMILY SSF58100 51 405 9.94E-59 T 13-10-2018 Y11_32261 9c4fcba0c8072d4c2542ce015d3f59cf 185 Pfam PF00293 NUDIX domain 46 124 4.6E-13 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Y11_32261 9c4fcba0c8072d4c2542ce015d3f59cf 185 SUPERFAMILY SSF55811 3 180 1.35E-36 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Y11_32261 9c4fcba0c8072d4c2542ce015d3f59cf 185 Gene3D G3DSA:3.90.79.10 7 183 2.1E-43 T 13-10-2018 Y11_32261 9c4fcba0c8072d4c2542ce015d3f59cf 185 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Y11_22211 64fe20410003bb65b06b284425b52d85 263 Pfam PF01548 Transposase 16 156 2.5E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_22211 64fe20410003bb65b06b284425b52d85 263 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 256 2.6E-6 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_15961 b45a17070e42ebd36b3c96bc0dce963f 225 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 17 215 1.2E-50 T 13-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 Y11_15961 b45a17070e42ebd36b3c96bc0dce963f 225 Pfam PF02361 Cobalt transport protein 14 221 4.7E-44 T 13-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Y11_38491 7f9d5b575acdbfaad3a93b90346eea0d 166 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 15 84 4.1E-12 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Y11_38491 7f9d5b575acdbfaad3a93b90346eea0d 166 Gene3D G3DSA:2.40.10.330 83 139 3.5E-38 T 13-10-2018 Y11_38491 7f9d5b575acdbfaad3a93b90346eea0d 166 SUPERFAMILY SSF54534 15 153 3.34E-33 T 13-10-2018 Y11_38491 7f9d5b575acdbfaad3a93b90346eea0d 166 Gene3D G3DSA:3.10.50.40 24 152 3.5E-38 T 13-10-2018 Y11_35961 c146b3280e763fd1cdc240665e198231 118 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 1 118 26.211 T 13-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 Y11_35961 c146b3280e763fd1cdc240665e198231 118 SUPERFAMILY SSF81343 1 118 1.09E-50 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_35961 c146b3280e763fd1cdc240665e198231 118 Gene3D G3DSA:1.20.1300.10 1 118 2.7E-50 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_35961 c146b3280e763fd1cdc240665e198231 118 Pfam PF02313 Fumarate reductase subunit D 5 116 2.3E-49 T 13-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 Y11_35961 c146b3280e763fd1cdc240665e198231 118 PIRSF PIRSF000179 1 118 1.7E-49 T 13-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 Y11_35961 c146b3280e763fd1cdc240665e198231 118 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 3 118 1.0E-46 T 13-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 Y11_27861 9bb779a48d9c2ed1d7f2d2efc7e203e7 309 Gene3D G3DSA:3.40.50.880 1 301 2.0E-120 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_27861 9bb779a48d9c2ed1d7f2d2efc7e203e7 309 SUPERFAMILY SSF52317 17 297 1.35E-99 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_27861 9bb779a48d9c2ed1d7f2d2efc7e203e7 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.2E-131 T 13-10-2018 IPR033752 MetA family Y11_27861 9bb779a48d9c2ed1d7f2d2efc7e203e7 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 4.6E-157 T 13-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 Y11_27861 9bb779a48d9c2ed1d7f2d2efc7e203e7 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-143 T 13-10-2018 Y11_27861 9bb779a48d9c2ed1d7f2d2efc7e203e7 309 PIRSF PIRSF000450 1 308 4.2E-146 T 13-10-2018 IPR033752 MetA family Y11_27861 9bb779a48d9c2ed1d7f2d2efc7e203e7 309 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 40.845 T 13-10-2018 IPR033752 MetA family Y11_02031 7d0db4e718002c86b824e57dec1da671 691 PIRSF PIRSF006107 1 688 0.0 T 13-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Y11_02031 7d0db4e718002c86b824e57dec1da671 691 Gene3D G3DSA:3.40.50.300 1 181 1.6E-5 T 13-10-2018 Y11_02031 7d0db4e718002c86b824e57dec1da671 691 Gene3D G3DSA:3.40.50.10750 503 656 1.8E-135 T 13-10-2018 Y11_02031 7d0db4e718002c86b824e57dec1da671 691 SUPERFAMILY SSF53659 366 683 5.35E-94 T 13-10-2018 Y11_02031 7d0db4e718002c86b824e57dec1da671 691 Gene3D G3DSA:3.40.50.10950 372 682 1.8E-135 T 13-10-2018 Y11_02031 7d0db4e718002c86b824e57dec1da671 691 Pfam PF01515 Phosphate acetyl/butaryl transferase 365 680 1.0E-127 T 13-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Y11_02031 7d0db4e718002c86b824e57dec1da671 691 Pfam PF07085 DRTGG domain 207 318 1.0E-28 T 13-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Y11_02031 7d0db4e718002c86b824e57dec1da671 691 Gene3D G3DSA:3.40.1390.20 199 339 2.7E-14 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Y11_02031 7d0db4e718002c86b824e57dec1da671 691 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 380 680 2.7E-136 T 13-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Y11_02031 7d0db4e718002c86b824e57dec1da671 691 SUPERFAMILY SSF75138 203 327 1.18E-25 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Y11_02031 7d0db4e718002c86b824e57dec1da671 691 Pfam PF13500 AAA domain 1 203 1.1E-38 T 13-10-2018 Y11_02031 7d0db4e718002c86b824e57dec1da671 691 SUPERFAMILY SSF52540 2 214 4.99E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_35401 f1babfadf0633bf05003a2df4414104f 451 SUPERFAMILY SSF52540 97 365 2.55E-92 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_35401 f1babfadf0633bf05003a2df4414104f 451 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 350 359 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_35401 f1babfadf0633bf05003a2df4414104f 451 SMART SM00382 162 343 1.7E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_35401 f1babfadf0633bf05003a2df4414104f 451 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 25 423 5.7E-156 T 13-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_35401 f1babfadf0633bf05003a2df4414104f 451 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 359 4.8E-75 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_35401 f1babfadf0633bf05003a2df4414104f 451 Gene3D G3DSA:3.40.50.12240 25 441 2.0E-138 T 13-10-2018 Y11_35941 2b77e1d5789d7e1724975ecd69867259 104 SUPERFAMILY SSF103481 5 103 2.22E-21 T 13-10-2018 Y11_35941 2b77e1d5789d7e1724975ecd69867259 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.9E-32 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Y11_35941 2b77e1d5789d7e1724975ecd69867259 104 Gene3D G3DSA:1.10.3730.20 1 104 2.6E-33 T 13-10-2018 Y11_04251 36802dd7fdee8fc9130251d736b07a28 328 Gene3D G3DSA:2.20.25.120 94 127 5.1E-5 T 13-10-2018 Y11_04251 36802dd7fdee8fc9130251d736b07a28 328 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 321 40.826 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Y11_04251 36802dd7fdee8fc9130251d736b07a28 328 Gene3D G3DSA:3.40.50.300 58 145 5.1E-5 T 13-10-2018 Y11_04251 36802dd7fdee8fc9130251d736b07a28 328 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 319 1.6E-114 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Y11_04251 36802dd7fdee8fc9130251d736b07a28 328 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 320 3.3E-110 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Y11_04251 36802dd7fdee8fc9130251d736b07a28 328 SUPERFAMILY SSF52540 46 182 2.44E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_31861 f3856bbb14616691ce741856a7096e0d 428 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Y11_31861 f3856bbb14616691ce741856a7096e0d 428 Gene3D G3DSA:2.160.10.10 301 428 2.9E-41 T 13-10-2018 Y11_31861 f3856bbb14616691ce741856a7096e0d 428 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 53.107 T 13-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Y11_31861 f3856bbb14616691ce741856a7096e0d 428 SUPERFAMILY SSF53448 19 294 6.98E-78 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_31861 f3856bbb14616691ce741856a7096e0d 428 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 3.1E-156 T 13-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Y11_31861 f3856bbb14616691ce741856a7096e0d 428 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Y11_31861 f3856bbb14616691ce741856a7096e0d 428 SUPERFAMILY SSF51161 313 413 3.88E-20 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Y11_31861 f3856bbb14616691ce741856a7096e0d 428 Gene3D G3DSA:3.90.550.10 1 300 1.3E-93 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_31861 f3856bbb14616691ce741856a7096e0d 428 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Y11_31861 f3856bbb14616691ce741856a7096e0d 428 Pfam PF00483 Nucleotidyl transferase 22 291 1.4E-68 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Y11_21841 18b6d921155ddfc81fe79f6ec75819da 368 PIRSF PIRSF006280 1 368 2.7E-176 T 13-10-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 Y11_21841 18b6d921155ddfc81fe79f6ec75819da 368 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 127 199 1.2E-11 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Y11_21841 18b6d921155ddfc81fe79f6ec75819da 368 Pfam PF00588 SpoU rRNA Methylase family 222 359 7.8E-31 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Y11_21841 18b6d921155ddfc81fe79f6ec75819da 368 SUPERFAMILY SSF75217 213 367 2.16E-39 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Y11_21841 18b6d921155ddfc81fe79f6ec75819da 368 Gene3D G3DSA:3.40.1280.10 200 368 2.2E-40 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Y11_21841 18b6d921155ddfc81fe79f6ec75819da 368 SUPERFAMILY SSF55315 119 196 1.0E-9 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like Y11_21841 18b6d921155ddfc81fe79f6ec75819da 368 Gene3D G3DSA:3.30.1330.30 115 196 6.7E-5 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like Y11_21841 18b6d921155ddfc81fe79f6ec75819da 368 SMART SM00967 126 201 2.2E-8 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Y11_10961 07fa2c95ea1062d9f30feb5d557170bc 333 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_10961 07fa2c95ea1062d9f30feb5d557170bc 333 Gene3D G3DSA:3.40.50.300 13 330 2.0E-95 T 13-10-2018 Y11_10961 07fa2c95ea1062d9f30feb5d557170bc 333 SMART SM00382 44 250 4.1E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_10961 07fa2c95ea1062d9f30feb5d557170bc 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 308 7.9E-21 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Y11_10961 07fa2c95ea1062d9f30feb5d557170bc 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 244 326 3.2E-24 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Y11_10961 07fa2c95ea1062d9f30feb5d557170bc 333 Pfam PF00005 ABC transporter 36 192 8.5E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_10961 07fa2c95ea1062d9f30feb5d557170bc 333 SUPERFAMILY SSF52540 45 310 3.13E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_32271 f68bea5c212c908b01c37f392cb62b64 844 Pfam PF00912 Transglycosylase 48 222 1.5E-65 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_32271 f68bea5c212c908b01c37f392cb62b64 844 SUPERFAMILY SSF56601 204 827 7.93E-114 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_32271 f68bea5c212c908b01c37f392cb62b64 844 Gene3D G3DSA:2.40.50.140 309 415 1.8E-33 T 13-10-2018 Y11_32271 f68bea5c212c908b01c37f392cb62b64 844 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 58 779 4.3E-173 T 13-10-2018 Y11_32271 f68bea5c212c908b01c37f392cb62b64 844 SUPERFAMILY SSF53955 36 250 1.63E-80 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Y11_32271 f68bea5c212c908b01c37f392cb62b64 844 Pfam PF17092 Penicillin-binding protein OB-like domain 309 418 2.5E-32 T 13-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_32271 f68bea5c212c908b01c37f392cb62b64 844 Pfam PF00905 Penicillin binding protein transpeptidase domain 422 600 8.3E-24 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Y11_32271 f68bea5c212c908b01c37f392cb62b64 844 Gene3D G3DSA:1.10.3810.10 42 235 6.2E-81 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_21811 690c3de37d3495c7e522e96fc2452e31 390 Gene3D G3DSA:2.40.30.170 232 352 3.3E-36 T 13-10-2018 Y11_21811 690c3de37d3495c7e522e96fc2452e31 390 Gene3D G3DSA:2.40.50.100 60 94 1.2E-13 T 13-10-2018 Y11_21811 690c3de37d3495c7e522e96fc2452e31 390 Gene3D G3DSA:1.10.287.470 95 186 1.2E-13 T 13-10-2018 Y11_21811 690c3de37d3495c7e522e96fc2452e31 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 36 347 1.3E-15 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Y11_21811 690c3de37d3495c7e522e96fc2452e31 390 SUPERFAMILY SSF111369 57 113 1.06E-6 T 13-10-2018 Y11_21811 690c3de37d3495c7e522e96fc2452e31 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 289 7.0E-12 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Y11_21811 690c3de37d3495c7e522e96fc2452e31 390 SUPERFAMILY SSF111369 194 269 2.88E-8 T 13-10-2018 Y11_21811 690c3de37d3495c7e522e96fc2452e31 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 2.3E-132 T 13-10-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 Y11_27901 f147f8be7e52fd1448415f0175410ef9 632 SUPERFAMILY SSF56935 37 632 3.8E-120 T 13-10-2018 Y11_27901 f147f8be7e52fd1448415f0175410ef9 632 Gene3D G3DSA:2.40.170.20 163 632 2.1E-137 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Y11_27901 f147f8be7e52fd1448415f0175410ef9 632 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 11 632 2.0E-196 T 13-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 Y11_27901 f147f8be7e52fd1448415f0175410ef9 632 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 615 632 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site Y11_27901 f147f8be7e52fd1448415f0175410ef9 632 Pfam PF00593 TonB dependent receptor 182 631 4.6E-44 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Y11_27901 f147f8be7e52fd1448415f0175410ef9 632 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 9 632 34.509 T 13-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 Y11_27901 f147f8be7e52fd1448415f0175410ef9 632 Gene3D G3DSA:2.170.130.10 32 162 5.1E-36 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Y11_27901 f147f8be7e52fd1448415f0175410ef9 632 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 157 1.8E-26 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Y11_10031 c2d2d427fd7de8882f3729d7a33cb0a2 332 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 13-10-2018 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 Y11_10031 c2d2d427fd7de8882f3729d7a33cb0a2 332 SUPERFAMILY SSF51556 5 327 1.91E-75 T 13-10-2018 IPR032466 Metal-dependent hydrolase Y11_10031 c2d2d427fd7de8882f3729d7a33cb0a2 332 Pfam PF00962 Adenosine/AMP deaminase 6 327 3.5E-95 T 13-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 Y11_10031 c2d2d427fd7de8882f3729d7a33cb0a2 332 Gene3D G3DSA:3.20.20.140 4 332 2.3E-97 T 13-10-2018 Y11_10031 c2d2d427fd7de8882f3729d7a33cb0a2 332 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 5.2E-108 T 13-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 Y11_10031 c2d2d427fd7de8882f3729d7a33cb0a2 332 Hamap MF_00540 Adenosine deaminase [add]. 1 331 52.707 T 13-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 Y11_27521 355f4b8d836d2031a5f4ca7e3c67e9c4 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 2.2E-36 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Y11_27521 355f4b8d836d2031a5f4ca7e3c67e9c4 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 2.2E-36 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Y11_27521 355f4b8d836d2031a5f4ca7e3c67e9c4 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 2.2E-36 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Y11_27521 355f4b8d836d2031a5f4ca7e3c67e9c4 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 2.2E-36 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Y11_27521 355f4b8d836d2031a5f4ca7e3c67e9c4 397 SUPERFAMILY SSF53383 1 392 1.25E-114 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_27521 355f4b8d836d2031a5f4ca7e3c67e9c4 397 Gene3D G3DSA:3.90.1150.10 11 392 1.5E-153 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_27521 355f4b8d836d2031a5f4ca7e3c67e9c4 397 Pfam PF00155 Aminotransferase class I and II 27 392 4.3E-79 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_27521 355f4b8d836d2031a5f4ca7e3c67e9c4 397 Gene3D G3DSA:3.40.640.10 60 301 1.5E-153 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_27521 355f4b8d836d2031a5f4ca7e3c67e9c4 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Y11_34481 75bc76c5cd43dde5c6f9cae0f6d0d7a0 364 Gene3D G3DSA:2.40.50.940 223 355 2.9E-25 T 13-10-2018 Y11_34481 75bc76c5cd43dde5c6f9cae0f6d0d7a0 364 Gene3D G3DSA:2.40.50.140 285 346 2.9E-25 T 13-10-2018 Y11_34481 75bc76c5cd43dde5c6f9cae0f6d0d7a0 364 Gene3D G3DSA:3.40.50.300 3 222 1.8E-63 T 13-10-2018 Y11_34481 75bc76c5cd43dde5c6f9cae0f6d0d7a0 364 Pfam PF08402 TOBE domain 278 354 1.7E-5 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Y11_34481 75bc76c5cd43dde5c6f9cae0f6d0d7a0 364 SUPERFAMILY SSF50331 237 362 4.37E-26 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Y11_34481 75bc76c5cd43dde5c6f9cae0f6d0d7a0 364 SUPERFAMILY SSF52540 4 242 3.1E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_34481 75bc76c5cd43dde5c6f9cae0f6d0d7a0 364 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_34481 75bc76c5cd43dde5c6f9cae0f6d0d7a0 364 SMART SM00382 29 212 8.9E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_34481 75bc76c5cd43dde5c6f9cae0f6d0d7a0 364 Pfam PF00005 ABC transporter 21 162 3.7E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Gene3D G3DSA:3.40.50.11050 2137 2355 3.4E-64 T 13-10-2018 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF03543 Yersinia/Haemophilus virulence surface antigen 1920 1997 2.9E-7 T 13-10-2018 IPR006473 Peptidase C58, YopT-type domain GO:0004197|GO:0009405 Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 SUPERFAMILY SSF51120 2890 3025 5.23E-7 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF11713 Peptidase C80 family 2173 2331 2.4E-33 T 13-10-2018 IPR020974 CGT/MARTX, cysteine protease (CPD) domain Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 SUPERFAMILY SSF51120 2971 3174 2.3E-17 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 PRINTS PR00313 NodO calcium binding signature 3085 3093 1.6E-6 T 13-10-2018 Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 PRINTS PR00313 NodO calcium binding signature 3065 3073 1.6E-6 T 13-10-2018 Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 PRINTS PR00313 NodO calcium binding signature 3103 3112 1.6E-6 T 13-10-2018 Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 PRINTS PR00313 NodO calcium binding signature 3044 3055 1.6E-6 T 13-10-2018 Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Gene3D G3DSA:2.160.20.160 2950 3175 1.9E-21 T 13-10-2018 Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 790 802 9.3 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 495 510 1.7 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 888 899 0.66 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 825 838 1.7 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 435 452 22.0 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 767 784 0.6 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 966 979 1.5 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 748 761 1.5 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 1156 1171 1.0 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 455 470 6.3 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 1061 1076 21.0 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 869 884 5.0 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 924 941 0.15 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 121 134 1.0 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 475 492 0.63 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 710 726 0.27 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 632 645 7.1 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 1138 1149 14.0 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 907 918 16.0 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 103 118 0.29 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 672 684 1.1 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 945 956 10.0 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 1006 1016 9.0 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 1021 1033 3.1 T 13-10-2018 IPR011509 RtxA toxin Y11_18761 f0dc6063c9aa69ec46a1026fd11fc049 3245 Pfam PF07634 RtxA repeat 729 745 5.9 T 13-10-2018 IPR011509 RtxA toxin Y11_19241 be4d8807a6b70c8d0f335ba049f115e4 631 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 1.7E-45 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Y11_19241 be4d8807a6b70c8d0f335ba049f115e4 631 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 614 52.855 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_19241 be4d8807a6b70c8d0f335ba049f115e4 631 SUPERFAMILY SSF56519 57 254 7.98E-53 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Y11_19241 be4d8807a6b70c8d0f335ba049f115e4 631 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 607 3.0E-87 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Y11_19241 be4d8807a6b70c8d0f335ba049f115e4 631 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 610 2.7E-237 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_19241 be4d8807a6b70c8d0f335ba049f115e4 631 Gene3D G3DSA:3.90.1310.10 65 248 4.9E-50 T 13-10-2018 Y11_19241 be4d8807a6b70c8d0f335ba049f115e4 631 Gene3D G3DSA:3.30.1390.30 86 161 4.9E-50 T 13-10-2018 Y11_19241 be4d8807a6b70c8d0f335ba049f115e4 631 Gene3D G3DSA:3.40.710.10 249 619 3.4E-95 T 13-10-2018 Y11_19241 be4d8807a6b70c8d0f335ba049f115e4 631 SUPERFAMILY SSF56601 255 610 2.29E-92 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_00601 eb84668d085006b8843d331ea1754d75 508 SUPERFAMILY SSF103473 12 467 6.41E-70 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_00601 eb84668d085006b8843d331ea1754d75 508 Hamap MF_01238 Sialic acid transporter NanT [nanT]. 13 508 49.774 T 13-10-2018 IPR004742 Sialic acid transporter GO:0015136|GO:0015739|GO:0016021 Y11_00601 eb84668d085006b8843d331ea1754d75 508 Gene3D G3DSA:1.20.1250.20 288 471 7.3E-21 T 13-10-2018 Y11_00601 eb84668d085006b8843d331ea1754d75 508 Gene3D G3DSA:1.20.1250.20 28 263 2.8E-44 T 13-10-2018 Y11_00601 eb84668d085006b8843d331ea1754d75 508 Pfam PF07690 Major Facilitator Superfamily 296 466 1.4E-12 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_00601 eb84668d085006b8843d331ea1754d75 508 Pfam PF07690 Major Facilitator Superfamily 37 262 4.2E-29 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_32741 2bba76418076f63301997697ac428cb8 194 Gene3D G3DSA:3.10.50.40 3 154 2.4E-60 T 13-10-2018 Y11_32741 2bba76418076f63301997697ac428cb8 194 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 9.5E-9 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Y11_32741 2bba76418076f63301997697ac428cb8 194 SUPERFAMILY SSF54534 2 140 1.87E-32 T 13-10-2018 Y11_32741 2bba76418076f63301997697ac428cb8 194 Gene3D G3DSA:2.40.10.330 71 121 2.4E-60 T 13-10-2018 Y11_02451 4f782ee4f58cca8bda72c7f15c792913 274 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 21 258 8.0E-81 T 13-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 Y11_02451 4f782ee4f58cca8bda72c7f15c792913 274 SUPERFAMILY SSF53474 19 260 1.91E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_02451 4f782ee4f58cca8bda72c7f15c792913 274 Pfam PF12697 Alpha/beta hydrolase family 24 252 1.7E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_02451 4f782ee4f58cca8bda72c7f15c792913 274 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 19 259 34.501 T 13-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 Y11_02451 4f782ee4f58cca8bda72c7f15c792913 274 Gene3D G3DSA:3.40.50.1820 14 260 7.9E-58 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_20001 4ec541502da586e679fa9f7553546f55 327 SUPERFAMILY SSF53800 4 320 7.33E-100 T 13-10-2018 Y11_20001 4ec541502da586e679fa9f7553546f55 327 Pfam PF00762 Ferrochelatase 6 319 2.4E-108 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Y11_20001 4ec541502da586e679fa9f7553546f55 327 Gene3D G3DSA:3.40.50.1400 163 301 7.8E-92 T 13-10-2018 Y11_20001 4ec541502da586e679fa9f7553546f55 327 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 37.819 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Y11_20001 4ec541502da586e679fa9f7553546f55 327 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 13-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Y11_20001 4ec541502da586e679fa9f7553546f55 327 TIGRFAM TIGR00109 hemH: ferrochelatase 1 318 3.7E-108 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Y11_20001 4ec541502da586e679fa9f7553546f55 327 Gene3D G3DSA:3.40.50.1400 7 319 7.8E-92 T 13-10-2018 Y11_32991 7f441aa56bd262bd2d84ebb291a6b5d8 179 PIRSF PIRSF002161 1 179 4.0E-67 T 13-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32991 7f441aa56bd262bd2d84ebb291a6b5d8 179 Pfam PF00281 Ribosomal protein L5 24 80 1.4E-28 T 13-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32991 7f441aa56bd262bd2d84ebb291a6b5d8 179 SUPERFAMILY SSF55282 4 179 3.53E-79 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32991 7f441aa56bd262bd2d84ebb291a6b5d8 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.774 T 13-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32991 7f441aa56bd262bd2d84ebb291a6b5d8 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.6E-41 T 13-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32991 7f441aa56bd262bd2d84ebb291a6b5d8 179 Gene3D G3DSA:3.30.1440.10 1 179 8.4E-82 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_39821 17caeb7d7ff070539c3143071347e959 431 ProSitePatterns PS00164 Enolase signature. 339 352 - T 13-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_39821 17caeb7d7ff070539c3143071347e959 431 Gene3D G3DSA:3.20.20.120 128 431 9.7E-137 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Y11_39821 17caeb7d7ff070539c3143071347e959 431 SUPERFAMILY SSF54826 3 138 3.16E-56 T 13-10-2018 Y11_39821 17caeb7d7ff070539c3143071347e959 431 PIRSF PIRSF001400 1 429 1.8E-191 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_39821 17caeb7d7ff070539c3143071347e959 431 Pfam PF03952 Enolase, N-terminal domain 4 134 2.6E-58 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_39821 17caeb7d7ff070539c3143071347e959 431 SMART SM01193 4 134 5.3E-93 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_39821 17caeb7d7ff070539c3143071347e959 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 1.2E-139 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_39821 17caeb7d7ff070539c3143071347e959 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 1.1E-205 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_39821 17caeb7d7ff070539c3143071347e959 431 Gene3D G3DSA:3.30.390.10 3 127 1.0E-54 T 13-10-2018 IPR029017 Enolase-like, N-terminal Y11_39821 17caeb7d7ff070539c3143071347e959 431 SMART SM01192 143 430 1.8E-212 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_39821 17caeb7d7ff070539c3143071347e959 431 Hamap MF_00318 Enolase [eno]. 2 416 44.217 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_39821 17caeb7d7ff070539c3143071347e959 431 PRINTS PR00148 Enolase signature 107 123 1.2E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_39821 17caeb7d7ff070539c3143071347e959 431 PRINTS PR00148 Enolase signature 37 51 1.2E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_39821 17caeb7d7ff070539c3143071347e959 431 PRINTS PR00148 Enolase signature 165 178 1.2E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_39821 17caeb7d7ff070539c3143071347e959 431 PRINTS PR00148 Enolase signature 368 385 1.2E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_39821 17caeb7d7ff070539c3143071347e959 431 PRINTS PR00148 Enolase signature 316 327 1.2E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_39821 17caeb7d7ff070539c3143071347e959 431 PRINTS PR00148 Enolase signature 339 353 1.2E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_39821 17caeb7d7ff070539c3143071347e959 431 SUPERFAMILY SSF51604 143 427 3.54E-127 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Y11_36261 686dd584f253d9999d7abe3a0494fcce 91 Pfam PF07338 Protein of unknown function (DUF1471) 37 91 2.6E-17 T 13-10-2018 IPR010854 Domain of unknown function DUF1471 Y11_36261 686dd584f253d9999d7abe3a0494fcce 91 Gene3D G3DSA:3.30.1660.10 20 91 2.4E-19 T 13-10-2018 IPR025543 Dodecin-like Y11_36261 686dd584f253d9999d7abe3a0494fcce 91 SUPERFAMILY SSF159871 1 91 2.75E-24 T 13-10-2018 IPR036275 YdgH-like superfamily Y11_26901 893bd4884377a743041ff489b4787dea 651 Pfam PF04632 Fusaric acid resistance protein family 8 649 2.4E-170 T 13-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 Y11_26901 893bd4884377a743041ff489b4787dea 651 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 1 651 56.175 T 13-10-2018 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0046942 Y11_11231 587750a32ccc67add2c21236ebf7c46b 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 5.3E-130 T 13-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 Y11_11231 587750a32ccc67add2c21236ebf7c46b 338 SUPERFAMILY SSF53774 3 335 2.22E-111 T 13-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 Y11_11231 587750a32ccc67add2c21236ebf7c46b 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 4.5E-17 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Y11_11231 587750a32ccc67add2c21236ebf7c46b 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 4.5E-17 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Y11_11231 587750a32ccc67add2c21236ebf7c46b 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 4.5E-17 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Y11_11231 587750a32ccc67add2c21236ebf7c46b 338 SMART SM00870 5 323 6.1E-138 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Y11_11231 587750a32ccc67add2c21236ebf7c46b 338 PIRSF PIRSF500176 2 332 1.7E-113 T 13-10-2018 Y11_11231 587750a32ccc67add2c21236ebf7c46b 338 PIRSF PIRSF001220 1 334 1.5E-98 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Y11_11231 587750a32ccc67add2c21236ebf7c46b 338 Gene3D G3DSA:3.40.50.1170 1 208 5.7E-91 T 13-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 Y11_11231 587750a32ccc67add2c21236ebf7c46b 338 Pfam PF00710 Asparaginase, N-terminal 6 186 2.2E-63 T 13-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 Y11_11231 587750a32ccc67add2c21236ebf7c46b 338 Gene3D G3DSA:3.40.50.40 209 338 5.4E-49 T 13-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 Y11_11231 587750a32ccc67add2c21236ebf7c46b 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 13-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 Y11_11231 587750a32ccc67add2c21236ebf7c46b 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 13-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 Y11_20861 35f0de4fe69c37a16254adc4d7869e99 85 Pfam PF02699 Preprotein translocase subunit 1 74 2.3E-25 T 13-10-2018 IPR003849 Preprotein translocase YajC Y11_20861 35f0de4fe69c37a16254adc4d7869e99 85 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 1 77 1.8E-31 T 13-10-2018 IPR003849 Preprotein translocase YajC Y11_20861 35f0de4fe69c37a16254adc4d7869e99 85 SMART SM01323 1 77 1.6E-30 T 13-10-2018 IPR003849 Preprotein translocase YajC Y11_41951 f5947d9405559e95f9a79b2503fb30df 134 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 7.8E-19 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Y11_41951 f5947d9405559e95f9a79b2503fb30df 134 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 17.368 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Y11_24861 d56910807622458f171ff2bf46546eb2 193 Gene3D G3DSA:3.40.50.1820 1 193 1.3E-63 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_24861 d56910807622458f171ff2bf46546eb2 193 SUPERFAMILY SSF53474 3 188 4.32E-16 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_24861 d56910807622458f171ff2bf46546eb2 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 1.1E-69 T 13-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA Y11_42311 673fded5f47555ca10d9008ff958d9e5 318 PIRSF PIRSF005427 1 318 7.1E-89 T 13-10-2018 IPR005588 MucB/RseB Y11_42311 673fded5f47555ca10d9008ff958d9e5 318 Pfam PF17188 MucB/RseB C-terminal domain 219 312 3.1E-29 T 13-10-2018 IPR033436 MucB/RseB, C-terminal Y11_42311 673fded5f47555ca10d9008ff958d9e5 318 Gene3D G3DSA:3.30.200.100 218 318 3.6E-30 T 13-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily Y11_42311 673fded5f47555ca10d9008ff958d9e5 318 Gene3D G3DSA:2.50.20.10 27 209 1.6E-53 T 13-10-2018 Y11_42311 673fded5f47555ca10d9008ff958d9e5 318 Pfam PF03888 MucB/RseB N-terminal domain 28 196 2.1E-61 T 13-10-2018 IPR033434 MucB/RseB, N-terminal Y11_36121 00cd107d2b29f90c3701abb1c2662112 101 SUPERFAMILY SSF50182 7 69 2.15E-23 T 13-10-2018 IPR010920 LSM domain superfamily Y11_36121 00cd107d2b29f90c3701abb1c2662112 101 Gene3D G3DSA:2.30.30.100 1 72 1.9E-33 T 13-10-2018 Y11_36121 00cd107d2b29f90c3701abb1c2662112 101 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 26.252 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Y11_36121 00cd107d2b29f90c3701abb1c2662112 101 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 8.4E-28 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Y11_36121 00cd107d2b29f90c3701abb1c2662112 101 Pfam PF17209 Hfq protein 7 69 1.2E-29 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Y11_18731 26f13ac8cf6a166b20e1ab48aa3d7287 351 Gene3D G3DSA:3.60.15.10 43 342 1.1E-17 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_18731 26f13ac8cf6a166b20e1ab48aa3d7287 351 PIRSF PIRSF000962 8 351 2.6E-122 T 13-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 Y11_18731 26f13ac8cf6a166b20e1ab48aa3d7287 351 ProSitePatterns PS00607 cAMP phosphodiesterases class-II signature. 125 139 - T 13-10-2018 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site GO:0008081 Y11_18731 26f13ac8cf6a166b20e1ab48aa3d7287 351 SUPERFAMILY SSF56281 49 317 2.44E-21 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_18731 26f13ac8cf6a166b20e1ab48aa3d7287 351 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 276 289 1.8E-29 T 13-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 Y11_18731 26f13ac8cf6a166b20e1ab48aa3d7287 351 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 148 169 1.8E-29 T 13-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 Y11_18731 26f13ac8cf6a166b20e1ab48aa3d7287 351 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 121 139 1.8E-29 T 13-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 Y11_18731 26f13ac8cf6a166b20e1ab48aa3d7287 351 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 257 268 1.8E-29 T 13-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 Y11_18731 26f13ac8cf6a166b20e1ab48aa3d7287 351 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 302 313 1.8E-29 T 13-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 Y11_18731 26f13ac8cf6a166b20e1ab48aa3d7287 351 Pfam PF02112 cAMP phosphodiesterases class-II 48 346 5.7E-55 T 13-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 Y11_08331 026c1812abe43b83e89733683db40ad3 296 Gene3D G3DSA:3.90.1720.10 157 291 2.5E-40 T 13-10-2018 Y11_08331 026c1812abe43b83e89733683db40ad3 296 Pfam PF00877 NlpC/P60 family 178 288 2.3E-30 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Y11_08331 026c1812abe43b83e89733683db40ad3 296 SUPERFAMILY SSF54001 159 290 2.8E-39 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Y11_29431 9b52b847e252f0c2cf8202628218eef9 328 Gene3D G3DSA:3.30.200.70 13 108 3.6E-124 T 13-10-2018 Y11_29431 9b52b847e252f0c2cf8202628218eef9 328 Gene3D G3DSA:1.20.1270.170 149 307 3.6E-124 T 13-10-2018 Y11_29431 9b52b847e252f0c2cf8202628218eef9 328 Pfam PF01636 Phosphotransferase enzyme family 33 258 1.2E-44 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase Y11_29431 9b52b847e252f0c2cf8202628218eef9 328 Gene3D G3DSA:1.10.510.10 60 258 3.6E-124 T 13-10-2018 Y11_29431 9b52b847e252f0c2cf8202628218eef9 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.514 T 13-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Y11_29431 9b52b847e252f0c2cf8202628218eef9 328 SUPERFAMILY SSF56112 6 327 9.91E-89 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Y11_38081 2bcc1c11abc0deffe9c935c8acaf48c5 239 Pfam PF01048 Phosphorylase superfamily 15 218 1.4E-41 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Y11_38081 2bcc1c11abc0deffe9c935c8acaf48c5 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.738 T 13-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 Y11_38081 2bcc1c11abc0deffe9c935c8acaf48c5 239 Gene3D G3DSA:3.40.50.1580 1 238 6.5E-78 T 13-10-2018 Y11_38081 2bcc1c11abc0deffe9c935c8acaf48c5 239 SUPERFAMILY SSF53167 3 234 7.72E-95 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Y11_38081 2bcc1c11abc0deffe9c935c8acaf48c5 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 2.5E-124 T 13-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 Y11_38081 2bcc1c11abc0deffe9c935c8acaf48c5 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 13-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_09261 1850d43359616c3cd2609e619a53f591 78 SUPERFAMILY SSF55021 1 60 1.62E-10 T 13-10-2018 Y11_09261 1850d43359616c3cd2609e619a53f591 78 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 57 2.0E-10 T 13-10-2018 Y11_09261 1850d43359616c3cd2609e619a53f591 78 Pfam PF13710 ACT domain 3 57 3.0E-7 T 13-10-2018 Y11_09261 1850d43359616c3cd2609e619a53f591 78 Gene3D G3DSA:3.30.70.260 1 75 1.9E-22 T 13-10-2018 Y11_30171 adf14c038aa520701016815d88a9acc1 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 4.0E-19 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Y11_30171 adf14c038aa520701016815d88a9acc1 137 SUPERFAMILY SSF49764 30 137 1.78E-18 T 13-10-2018 IPR008978 HSP20-like chaperone Y11_30171 adf14c038aa520701016815d88a9acc1 137 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 137 43.469 T 13-10-2018 IPR023728 Small heat shock protein IbpA Y11_30171 adf14c038aa520701016815d88a9acc1 137 Gene3D G3DSA:2.60.40.790 33 137 6.9E-18 T 13-10-2018 IPR008978 HSP20-like chaperone Y11_05381 2fcbcb20bbb220215e4154e467b0b440 711 Pfam PF00664 ABC transporter transmembrane region 174 435 6.4E-27 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Y11_05381 2fcbcb20bbb220215e4154e467b0b440 711 SMART SM00382 514 699 2.5E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_05381 2fcbcb20bbb220215e4154e467b0b440 711 Pfam PF00005 ABC transporter 506 654 1.3E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_05381 2fcbcb20bbb220215e4154e467b0b440 711 Gene3D G3DSA:1.20.1560.10 155 471 1.1E-48 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_05381 2fcbcb20bbb220215e4154e467b0b440 711 Gene3D G3DSA:3.90.70.10 7 153 1.0E-40 T 13-10-2018 Y11_05381 2fcbcb20bbb220215e4154e467b0b440 711 SUPERFAMILY SSF90123 166 639 2.62E-47 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_05381 2fcbcb20bbb220215e4154e467b0b440 711 SUPERFAMILY SSF52540 482 698 2.62E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_05381 2fcbcb20bbb220215e4154e467b0b440 711 ProSitePatterns PS00211 ABC transporters family signature. 626 640 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_05381 2fcbcb20bbb220215e4154e467b0b440 711 Gene3D G3DSA:3.40.50.300 476 711 2.3E-70 T 13-10-2018 Y11_05381 2fcbcb20bbb220215e4154e467b0b440 711 Pfam PF03412 Peptidase C39 family 16 144 6.8E-37 T 13-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 Y11_20781 9ab4c5807aac2dea3ce26371c801295d 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 4.1E-59 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Y11_20781 9ab4c5807aac2dea3ce26371c801295d 156 SUPERFAMILY SSF52121 3 154 4.45E-60 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Y11_20781 9ab4c5807aac2dea3ce26371c801295d 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.2E-55 T 13-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Y11_20781 9ab4c5807aac2dea3ce26371c801295d 156 Gene3D G3DSA:3.40.50.960 1 156 8.5E-64 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Y11_20781 9ab4c5807aac2dea3ce26371c801295d 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.977 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Y11_05841 271fc567dbb5807b0a81ecb78799c2d1 372 Pfam PF13438 Domain of unknown function (DUF4113) 320 367 6.4E-18 T 13-10-2018 IPR025188 Domain of unknown function DUF4113 Y11_05841 271fc567dbb5807b0a81ecb78799c2d1 372 Pfam PF00817 impB/mucB/samB family 4 100 3.1E-17 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Y11_05841 271fc567dbb5807b0a81ecb78799c2d1 372 Gene3D G3DSA:3.30.70.270 13 112 1.3E-20 T 13-10-2018 Y11_05841 271fc567dbb5807b0a81ecb78799c2d1 372 Pfam PF11799 impB/mucB/samB family C-terminal domain 191 300 2.5E-18 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Y11_05841 271fc567dbb5807b0a81ecb78799c2d1 372 Gene3D G3DSA:3.30.1490.100 195 303 3.3E-7 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Y11_05841 271fc567dbb5807b0a81ecb78799c2d1 372 SUPERFAMILY SSF56672 1 186 4.98E-43 T 13-10-2018 Y11_05841 271fc567dbb5807b0a81ecb78799c2d1 372 Pfam PF11798 IMS family HHH motif 122 149 1.2E-6 T 13-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Y11_05841 271fc567dbb5807b0a81ecb78799c2d1 372 SUPERFAMILY SSF100879 198 284 2.3E-6 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Y11_05841 271fc567dbb5807b0a81ecb78799c2d1 372 Gene3D G3DSA:1.10.150.20 122 178 1.3E-9 T 13-10-2018 Y11_05631 c4fb6089606e006860ba03fa8394c5a6 456 SUPERFAMILY SSF48557 10 454 6.13E-105 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 Y11_05631 c4fb6089606e006860ba03fa8394c5a6 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 2.5E-52 T 13-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 Y11_05631 c4fb6089606e006860ba03fa8394c5a6 456 Gene3D G3DSA:1.20.200.10 118 446 9.1E-158 T 13-10-2018 Y11_05631 c4fb6089606e006860ba03fa8394c5a6 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.7E-17 T 13-10-2018 IPR000362 Fumarate lyase family Y11_05631 c4fb6089606e006860ba03fa8394c5a6 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.7E-17 T 13-10-2018 IPR000362 Fumarate lyase family Y11_05631 c4fb6089606e006860ba03fa8394c5a6 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.7E-17 T 13-10-2018 IPR000362 Fumarate lyase family Y11_05631 c4fb6089606e006860ba03fa8394c5a6 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.7E-17 T 13-10-2018 IPR000362 Fumarate lyase family Y11_05631 c4fb6089606e006860ba03fa8394c5a6 456 Pfam PF00206 Lyase 14 312 1.2E-77 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal Y11_05631 c4fb6089606e006860ba03fa8394c5a6 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 9.0E-152 T 13-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Y11_05631 c4fb6089606e006860ba03fa8394c5a6 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Y11_05631 c4fb6089606e006860ba03fa8394c5a6 456 Gene3D G3DSA:1.10.275.10 1 117 1.9E-53 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal Y11_05631 c4fb6089606e006860ba03fa8394c5a6 456 Gene3D G3DSA:1.10.40.30 382 445 9.1E-158 T 13-10-2018 Y11_04601 54b0a069f706f3fd29e2ef8142740104 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 7.8E-94 T 13-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Y11_04601 54b0a069f706f3fd29e2ef8142740104 172 Pfam PF07977 FabA-like domain 29 158 6.0E-54 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Y11_04601 54b0a069f706f3fd29e2ef8142740104 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.464 T 13-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Y11_04601 54b0a069f706f3fd29e2ef8142740104 172 Gene3D G3DSA:3.10.129.10 1 172 1.5E-65 T 13-10-2018 Y11_04601 54b0a069f706f3fd29e2ef8142740104 172 SUPERFAMILY SSF54637 3 169 6.88E-57 T 13-10-2018 IPR029069 HotDog domain superfamily Y11_15981 698d1471113979cdb80bb753107c2733 103 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 95 6.2E-15 T 13-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 Y11_15981 698d1471113979cdb80bb753107c2733 103 Gene3D G3DSA:1.10.1760.20 1 100 2.4E-12 T 13-10-2018 Y11_35971 fb604c5a7a9c375434e06e3a6fbe40d6 130 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 28.041 T 13-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 Y11_35971 fb604c5a7a9c375434e06e3a6fbe40d6 130 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 114 5.0E-52 T 13-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 Y11_35971 fb604c5a7a9c375434e06e3a6fbe40d6 130 Pfam PF02300 Fumarate reductase subunit C 3 128 2.3E-53 T 13-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 Y11_35971 fb604c5a7a9c375434e06e3a6fbe40d6 130 SUPERFAMILY SSF81343 2 129 5.56E-56 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_35971 fb604c5a7a9c375434e06e3a6fbe40d6 130 PIRSF PIRSF000180 2 130 8.6E-56 T 13-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 Y11_35971 fb604c5a7a9c375434e06e3a6fbe40d6 130 Gene3D G3DSA:1.20.1300.10 2 130 1.4E-49 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_31381 e0e2752b2028c0125fa2661ee8e7600b 1080 Pfam PF03212 Pertactin 638 740 9.5E-14 T 13-10-2018 IPR004899 Pertactin, central region Y11_31381 e0e2752b2028c0125fa2661ee8e7600b 1080 SMART SM00869 811 1068 7.1E-33 T 13-10-2018 IPR005546 Autotransporter beta-domain Y11_31381 e0e2752b2028c0125fa2661ee8e7600b 1080 SUPERFAMILY SSF103515 778 1080 2.35E-42 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Y11_31381 e0e2752b2028c0125fa2661ee8e7600b 1080 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 638 1080 4.2E-99 T 13-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 Y11_31381 e0e2752b2028c0125fa2661ee8e7600b 1080 SUPERFAMILY SSF51126 161 741 3.08E-34 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor Y11_31381 e0e2752b2028c0125fa2661ee8e7600b 1080 Pfam PF03797 Autotransporter beta-domain 815 1057 1.5E-41 T 13-10-2018 IPR005546 Autotransporter beta-domain Y11_31381 e0e2752b2028c0125fa2661ee8e7600b 1080 Gene3D G3DSA:2.40.128.130 770 1080 2.3E-67 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Y11_31381 e0e2752b2028c0125fa2661ee8e7600b 1080 Gene3D G3DSA:2.160.20.20 291 744 2.2E-64 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily Y11_02051 520f9eb525b107063614f063345fdb3c 400 PIRSF PIRSF000722 2 400 1.5E-142 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_02051 520f9eb525b107063614f063345fdb3c 400 Gene3D G3DSA:3.30.420.40 3 198 1.7E-77 T 13-10-2018 Y11_02051 520f9eb525b107063614f063345fdb3c 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 9.0E-183 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_02051 520f9eb525b107063614f063345fdb3c 400 PRINTS PR00471 Acetate kinase family signature 380 392 1.6E-48 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_02051 520f9eb525b107063614f063345fdb3c 400 PRINTS PR00471 Acetate kinase family signature 6 17 1.6E-48 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_02051 520f9eb525b107063614f063345fdb3c 400 PRINTS PR00471 Acetate kinase family signature 325 341 1.6E-48 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_02051 520f9eb525b107063614f063345fdb3c 400 PRINTS PR00471 Acetate kinase family signature 206 227 1.6E-48 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_02051 520f9eb525b107063614f063345fdb3c 400 PRINTS PR00471 Acetate kinase family signature 176 189 1.6E-48 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_02051 520f9eb525b107063614f063345fdb3c 400 PRINTS PR00471 Acetate kinase family signature 302 315 1.6E-48 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_02051 520f9eb525b107063614f063345fdb3c 400 SUPERFAMILY SSF53067 160 398 1.12E-84 T 13-10-2018 Y11_02051 520f9eb525b107063614f063345fdb3c 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_02051 520f9eb525b107063614f063345fdb3c 400 Gene3D G3DSA:3.30.420.40 199 400 4.7E-86 T 13-10-2018 Y11_02051 520f9eb525b107063614f063345fdb3c 400 SUPERFAMILY SSF53067 4 199 2.14E-62 T 13-10-2018 Y11_02051 520f9eb525b107063614f063345fdb3c 400 Pfam PF00871 Acetokinase family 6 393 4.8E-174 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_02051 520f9eb525b107063614f063345fdb3c 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 187.423 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_02051 520f9eb525b107063614f063345fdb3c 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_40761 0af19c7c1e0fc91b26ab768a6d26c185 1148 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 1 1124 0.0 T 13-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 Y11_40761 0af19c7c1e0fc91b26ab768a6d26c185 1148 Pfam PF12705 PD-(D/E)XK nuclease superfamily 902 1096 1.2E-4 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Y11_40761 0af19c7c1e0fc91b26ab768a6d26c185 1148 Gene3D G3DSA:1.10.486.10 522 667 2.6E-170 T 13-10-2018 Y11_40761 0af19c7c1e0fc91b26ab768a6d26c185 1148 Gene3D G3DSA:3.40.50.300 384 785 2.6E-170 T 13-10-2018 Y11_40761 0af19c7c1e0fc91b26ab768a6d26c185 1148 SUPERFAMILY SSF52980 843 1126 2.2E-93 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Y11_40761 0af19c7c1e0fc91b26ab768a6d26c185 1148 Gene3D G3DSA:3.40.50.300 1 375 8.4E-136 T 13-10-2018 Y11_40761 0af19c7c1e0fc91b26ab768a6d26c185 1148 Gene3D G3DSA:3.90.320.10 831 1130 1.8E-115 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Y11_40761 0af19c7c1e0fc91b26ab768a6d26c185 1148 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 1 1125 21.202 T 13-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 Y11_40761 0af19c7c1e0fc91b26ab768a6d26c185 1148 Pfam PF13361 UvrD-like helicase C-terminal domain 477 748 3.1E-19 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Y11_40761 0af19c7c1e0fc91b26ab768a6d26c185 1148 Gene3D G3DSA:1.10.3170.10 95 288 8.4E-136 T 13-10-2018 Y11_40761 0af19c7c1e0fc91b26ab768a6d26c185 1148 Pfam PF00580 UvrD/REP helicase N-terminal domain 1 375 5.3E-47 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Y11_40761 0af19c7c1e0fc91b26ab768a6d26c185 1148 SUPERFAMILY SSF52540 1 758 3.23E-96 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_26661 c975f9ebcad751b20af8e9ec2f6f13fa 315 Gene3D G3DSA:1.10.260.40 1 61 3.0E-21 T 13-10-2018 Y11_26661 c975f9ebcad751b20af8e9ec2f6f13fa 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 313 2.2E-156 T 13-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 Y11_26661 c975f9ebcad751b20af8e9ec2f6f13fa 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 4.5E-20 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_26661 c975f9ebcad751b20af8e9ec2f6f13fa 315 Pfam PF13377 Periplasmic binding protein-like domain 169 312 9.0E-17 T 13-10-2018 Y11_26661 c975f9ebcad751b20af8e9ec2f6f13fa 315 Gene3D G3DSA:3.40.50.2300 68 302 8.4E-69 T 13-10-2018 Y11_26661 c975f9ebcad751b20af8e9ec2f6f13fa 315 SUPERFAMILY SSF47413 3 60 1.24E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_26661 c975f9ebcad751b20af8e9ec2f6f13fa 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 13-10-2018 Y11_26661 c975f9ebcad751b20af8e9ec2f6f13fa 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.2E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_26661 c975f9ebcad751b20af8e9ec2f6f13fa 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.2E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_26661 c975f9ebcad751b20af8e9ec2f6f13fa 315 SUPERFAMILY SSF53822 63 314 2.36E-64 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_26661 c975f9ebcad751b20af8e9ec2f6f13fa 315 SMART SM00354 4 74 9.9E-33 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_26661 c975f9ebcad751b20af8e9ec2f6f13fa 315 Gene3D G3DSA:3.40.50.2300 163 279 8.4E-69 T 13-10-2018 Y11_28121 ed504150c5fa4479fe3421d838d907b8 866 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 523 535 - T 13-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Y11_28121 ed504150c5fa4479fe3421d838d907b8 866 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 866 17.915 T 13-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Y11_28121 ed504150c5fa4479fe3421d838d907b8 866 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 120 131 - T 13-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Y11_28121 ed504150c5fa4479fe3421d838d907b8 866 SUPERFAMILY SSF51621 1 866 0.0 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Y11_28121 ed504150c5fa4479fe3421d838d907b8 866 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 119 132 8.3E-69 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Y11_28121 ed504150c5fa4479fe3421d838d907b8 866 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 172 188 8.3E-69 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Y11_28121 ed504150c5fa4479fe3421d838d907b8 866 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 521 541 8.3E-69 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Y11_28121 ed504150c5fa4479fe3421d838d907b8 866 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 695 721 8.3E-69 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Y11_28121 ed504150c5fa4479fe3421d838d907b8 866 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 231 246 8.3E-69 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Y11_28121 ed504150c5fa4479fe3421d838d907b8 866 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 563 592 8.3E-69 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Y11_28121 ed504150c5fa4479fe3421d838d907b8 866 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 372 392 8.3E-69 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Y11_28121 ed504150c5fa4479fe3421d838d907b8 866 Gene3D G3DSA:1.20.1440.90 259 375 4.8E-27 T 13-10-2018 Y11_28121 ed504150c5fa4479fe3421d838d907b8 866 Pfam PF00311 Phosphoenolpyruvate carboxylase 115 866 1.1E-292 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Y11_07341 6c48c7f12e53509a49b8e8db2b462d93 306 Gene3D G3DSA:3.40.190.10 169 265 3.7E-49 T 13-10-2018 Y11_07341 6c48c7f12e53509a49b8e8db2b462d93 306 Pfam PF03466 LysR substrate binding domain 94 294 6.2E-23 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_07341 6c48c7f12e53509a49b8e8db2b462d93 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 8.5E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_07341 6c48c7f12e53509a49b8e8db2b462d93 306 SUPERFAMILY SSF46785 2 82 2.23E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_07341 6c48c7f12e53509a49b8e8db2b462d93 306 Gene3D G3DSA:1.10.10.10 1 86 1.4E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_07341 6c48c7f12e53509a49b8e8db2b462d93 306 Gene3D G3DSA:3.40.190.10 92 289 3.7E-49 T 13-10-2018 Y11_07341 6c48c7f12e53509a49b8e8db2b462d93 306 SUPERFAMILY SSF53850 91 293 1.27E-31 T 13-10-2018 Y11_05471 a23733e071c8faa2faa5c07d1f8482e9 286 Hamap MF_01604 Thiamine kinase [thiK]. 2 282 42.057 T 13-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 Y11_05471 a23733e071c8faa2faa5c07d1f8482e9 286 SUPERFAMILY SSF56112 16 283 5.22E-41 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Y11_05471 a23733e071c8faa2faa5c07d1f8482e9 286 Gene3D G3DSA:3.90.1200.10 103 285 1.8E-22 T 13-10-2018 Y11_05471 a23733e071c8faa2faa5c07d1f8482e9 286 Pfam PF01636 Phosphotransferase enzyme family 61 235 7.5E-15 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase Y11_05471 a23733e071c8faa2faa5c07d1f8482e9 286 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 20 282 1.2E-99 T 13-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 Y11_21761 c87cb1cb5c09f10786d30f1e76653e76 400 Gene3D G3DSA:1.20.1250.20 11 385 8.5E-48 T 13-10-2018 Y11_21761 c87cb1cb5c09f10786d30f1e76653e76 400 Pfam PF07690 Major Facilitator Superfamily 20 298 4.6E-33 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_21761 c87cb1cb5c09f10786d30f1e76653e76 400 SUPERFAMILY SSF103473 12 390 7.32E-56 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_23031 327b03c2a3214ccad8969d7aa2ca2796 413 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Y11_23031 327b03c2a3214ccad8969d7aa2ca2796 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 8.8E-52 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Y11_23031 327b03c2a3214ccad8969d7aa2ca2796 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.0E-37 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Y11_23031 327b03c2a3214ccad8969d7aa2ca2796 413 SUPERFAMILY SSF52283 7 135 1.49E-48 T 13-10-2018 Y11_23031 327b03c2a3214ccad8969d7aa2ca2796 413 Gene3D G3DSA:3.40.50.720 109 297 1.9E-110 T 13-10-2018 Y11_23031 327b03c2a3214ccad8969d7aa2ca2796 413 SUPERFAMILY SSF55021 338 412 1.19E-18 T 13-10-2018 Y11_23031 327b03c2a3214ccad8969d7aa2ca2796 413 Gene3D G3DSA:3.40.50.720 14 312 1.9E-110 T 13-10-2018 Y11_23031 327b03c2a3214ccad8969d7aa2ca2796 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Y11_23031 327b03c2a3214ccad8969d7aa2ca2796 413 SUPERFAMILY SSF51735 108 295 1.89E-57 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_23031 327b03c2a3214ccad8969d7aa2ca2796 413 Gene3D G3DSA:3.30.70.260 328 412 1.9E-32 T 13-10-2018 Y11_23031 327b03c2a3214ccad8969d7aa2ca2796 413 Pfam PF01842 ACT domain 347 404 1.4E-6 T 13-10-2018 IPR002912 ACT domain Y11_23031 327b03c2a3214ccad8969d7aa2ca2796 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Y11_31491 233906044234756db0b62d2980eab48a 389 Gene3D G3DSA:1.10.3860.10 1 359 3.4E-103 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Y11_31491 233906044234756db0b62d2980eab48a 389 Pfam PF00375 Sodium:dicarboxylate symporter family 1 350 7.7E-95 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Y11_31491 233906044234756db0b62d2980eab48a 389 SUPERFAMILY SSF118215 1 351 5.1E-98 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Y11_16711 77bee974238ee77059cfe87d871d4037 426 Gene3D G3DSA:3.40.50.11090 81 245 2.6E-10 T 13-10-2018 Y11_16711 77bee974238ee77059cfe87d871d4037 426 SUPERFAMILY SSF53756 209 418 8.16E-16 T 13-10-2018 Y11_16711 77bee974238ee77059cfe87d871d4037 426 Pfam PF13692 Glycosyl transferases group 1 260 388 7.7E-7 T 13-10-2018 Y11_16711 77bee974238ee77059cfe87d871d4037 426 Gene3D G3DSA:3.40.50.2000 246 398 1.5E-34 T 13-10-2018 Y11_39851 9aaa26bf9b3b4eca9bdb2e02ebbfc80a 192 Gene3D G3DSA:1.20.120.740 5 192 1.7E-56 T 13-10-2018 Y11_39851 9aaa26bf9b3b4eca9bdb2e02ebbfc80a 192 SUPERFAMILY SSF101327 8 176 1.26E-50 T 13-10-2018 IPR036255 YgfB-like superfamily Y11_39851 9aaa26bf9b3b4eca9bdb2e02ebbfc80a 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 190 36.984 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 Y11_39851 9aaa26bf9b3b4eca9bdb2e02ebbfc80a 192 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 15 166 1.0E-10 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 Y11_39851 9aaa26bf9b3b4eca9bdb2e02ebbfc80a 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 177 4.7E-36 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 Y11_28941 514983c479d03d17364747ac51b1266a 159 Pfam PF01467 Cytidylyltransferase-like 6 134 1.9E-22 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Y11_28941 514983c479d03d17364747ac51b1266a 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 77 5.0E-4 T 13-10-2018 Y11_28941 514983c479d03d17364747ac51b1266a 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 3.3E-47 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Y11_28941 514983c479d03d17364747ac51b1266a 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 3.3E-47 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Y11_28941 514983c479d03d17364747ac51b1266a 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 3.3E-47 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Y11_28941 514983c479d03d17364747ac51b1266a 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 3.3E-47 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Y11_28941 514983c479d03d17364747ac51b1266a 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 3.3E-47 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Y11_28941 514983c479d03d17364747ac51b1266a 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 5.5E-58 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Y11_28941 514983c479d03d17364747ac51b1266a 159 Gene3D G3DSA:3.40.50.620 1 159 6.8E-55 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_28941 514983c479d03d17364747ac51b1266a 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.08 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Y11_28941 514983c479d03d17364747ac51b1266a 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 63 3.4E-15 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Y11_28941 514983c479d03d17364747ac51b1266a 159 SUPERFAMILY SSF52374 4 156 3.75E-43 T 13-10-2018 Y11_33341 107ee9c6cfa7907c5350ad1bc03b543d 496 Gene3D G3DSA:3.40.50.300 238 493 2.4E-48 T 13-10-2018 Y11_33341 107ee9c6cfa7907c5350ad1bc03b543d 496 SUPERFAMILY SSF52540 263 484 1.01E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_33341 107ee9c6cfa7907c5350ad1bc03b543d 496 SMART SM00382 280 474 3.9E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_33341 107ee9c6cfa7907c5350ad1bc03b543d 496 SMART SM00382 29 217 1.6E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_33341 107ee9c6cfa7907c5350ad1bc03b543d 496 SUPERFAMILY SSF52540 3 227 3.26E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_33341 107ee9c6cfa7907c5350ad1bc03b543d 496 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_33341 107ee9c6cfa7907c5350ad1bc03b543d 496 Gene3D G3DSA:3.40.50.300 1 237 1.4E-57 T 13-10-2018 Y11_33341 107ee9c6cfa7907c5350ad1bc03b543d 496 Pfam PF00005 ABC transporter 272 425 7.0E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_33341 107ee9c6cfa7907c5350ad1bc03b543d 496 Pfam PF00005 ABC transporter 20 169 1.6E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_03101 5f713170434456279586be18b66a99f8 327 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 171 2.2E-39 T 13-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Y11_03101 5f713170434456279586be18b66a99f8 327 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 240 320 7.3E-7 T 13-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Y11_03101 5f713170434456279586be18b66a99f8 327 SMART SM00833 239 322 2.8E-5 T 13-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Y11_03101 5f713170434456279586be18b66a99f8 327 Gene3D G3DSA:3.40.50.300 2 196 2.9E-44 T 13-10-2018 Y11_03101 5f713170434456279586be18b66a99f8 327 SUPERFAMILY SSF52540 6 186 4.48E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_23681 75ddc3b207a039cf74d4acff78ac9b61 261 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Y11_23681 75ddc3b207a039cf74d4acff78ac9b61 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 4.7E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Y11_23681 75ddc3b207a039cf74d4acff78ac9b61 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 70 83 4.7E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Y11_23681 75ddc3b207a039cf74d4acff78ac9b61 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 4.7E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Y11_23681 75ddc3b207a039cf74d4acff78ac9b61 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 4.7E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Y11_23681 75ddc3b207a039cf74d4acff78ac9b61 261 Gene3D G3DSA:3.90.230.10 2 254 9.9E-106 T 13-10-2018 Y11_23681 75ddc3b207a039cf74d4acff78ac9b61 261 Pfam PF00557 Metallopeptidase family M24 14 242 3.2E-52 T 13-10-2018 IPR000994 Peptidase M24 Y11_23681 75ddc3b207a039cf74d4acff78ac9b61 261 SUPERFAMILY SSF55920 6 255 3.14E-89 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like Y11_23681 75ddc3b207a039cf74d4acff78ac9b61 261 Hamap MF_01974 Methionine aminopeptidase [map]. 4 251 39.365 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Y11_23681 75ddc3b207a039cf74d4acff78ac9b61 261 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 5 249 5.0E-90 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Y11_14801 86fa4e54fada18c176b46aff0fd597fa 344 Gene3D G3DSA:1.10.260.40 4 64 9.7E-25 T 13-10-2018 Y11_14801 86fa4e54fada18c176b46aff0fd597fa 344 SMART SM00354 5 75 3.6E-31 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_14801 86fa4e54fada18c176b46aff0fd597fa 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 2.1E-20 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_14801 86fa4e54fada18c176b46aff0fd597fa 344 SUPERFAMILY SSF47413 5 63 1.49E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_14801 86fa4e54fada18c176b46aff0fd597fa 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 1.1E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_14801 86fa4e54fada18c176b46aff0fd597fa 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 1.1E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_14801 86fa4e54fada18c176b46aff0fd597fa 344 Gene3D G3DSA:3.40.50.2300 80 324 9.0E-74 T 13-10-2018 Y11_14801 86fa4e54fada18c176b46aff0fd597fa 344 Pfam PF13377 Periplasmic binding protein-like domain 174 333 3.6E-38 T 13-10-2018 Y11_14801 86fa4e54fada18c176b46aff0fd597fa 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 13-10-2018 Y11_14801 86fa4e54fada18c176b46aff0fd597fa 344 SUPERFAMILY SSF53822 65 336 5.55E-61 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_14801 86fa4e54fada18c176b46aff0fd597fa 344 Gene3D G3DSA:3.40.50.2300 164 328 9.0E-74 T 13-10-2018 Y11_26401 a83b9962d63bda2bbfb870e4ada223d9 208 Pfam PF05494 MlaC protein 31 195 4.0E-52 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Y11_26401 a83b9962d63bda2bbfb870e4ada223d9 208 Gene3D G3DSA:3.10.450.710 21 200 1.4E-41 T 13-10-2018 Y11_26401 a83b9962d63bda2bbfb870e4ada223d9 208 PIRSF PIRSF004649 1 208 1.2E-58 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Y11_01831 0fab3ac8b2f7131e22b8fde29e3574f4 239 Gene3D G3DSA:3.30.70.1070 155 232 8.0E-6 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Y11_01831 0fab3ac8b2f7131e22b8fde29e3574f4 239 Hamap MF_02022 Cell division protein DedD [dedD]. 14 237 25.619 T 13-10-2018 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 Y11_01831 0fab3ac8b2f7131e22b8fde29e3574f4 239 SUPERFAMILY SSF110997 160 232 8.5E-13 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Y11_01831 0fab3ac8b2f7131e22b8fde29e3574f4 239 Pfam PF05036 Sporulation related domain 160 232 3.5E-10 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Y11_19691 9faa4e1686a312aeb9f5bc2275604230 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 1.5E-104 T 13-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 Y11_19691 9faa4e1686a312aeb9f5bc2275604230 240 Gene3D G3DSA:3.60.21.10 1 235 6.7E-19 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Y11_19691 9faa4e1686a312aeb9f5bc2275604230 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 127.756 T 13-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 Y11_19691 9faa4e1686a312aeb9f5bc2275604230 240 SUPERFAMILY SSF56300 3 237 1.46E-34 T 13-10-2018 Y11_19691 9faa4e1686a312aeb9f5bc2275604230 240 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 7.7E-10 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Y11_37891 f9abe34dcf041de7ec4955931aa1dc18 718 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 50 - T 13-10-2018 IPR010916 TonB box, conserved site Y11_37891 f9abe34dcf041de7ec4955931aa1dc18 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 175 8.2E-19 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Y11_37891 f9abe34dcf041de7ec4955931aa1dc18 718 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 63 718 3.9E-92 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 Y11_37891 f9abe34dcf041de7ec4955931aa1dc18 718 Gene3D G3DSA:2.40.170.20 188 718 7.3E-115 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Y11_37891 f9abe34dcf041de7ec4955931aa1dc18 718 Gene3D G3DSA:2.170.130.10 60 184 3.9E-27 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Y11_37891 f9abe34dcf041de7ec4955931aa1dc18 718 SUPERFAMILY SSF56935 47 718 5.7E-112 T 13-10-2018 Y11_37891 f9abe34dcf041de7ec4955931aa1dc18 718 Pfam PF00593 TonB dependent receptor 216 715 1.2E-48 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Y11_37891 f9abe34dcf041de7ec4955931aa1dc18 718 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 701 718 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site Y11_08491 a3d26bf5b8169e3327126073c36a0272 217 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 4 217 7.1E-93 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Y11_08491 a3d26bf5b8169e3327126073c36a0272 217 PIRSF PIRSF000190 1 217 4.3E-81 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Y11_08491 a3d26bf5b8169e3327126073c36a0272 217 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 15 217 38.095 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Y11_08491 a3d26bf5b8169e3327126073c36a0272 217 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 177 217 5.3E-19 T 13-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Y11_08491 a3d26bf5b8169e3327126073c36a0272 217 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 121 6.8E-23 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Y11_08491 a3d26bf5b8169e3327126073c36a0272 217 SUPERFAMILY SSF50475 20 217 7.11E-67 T 13-10-2018 Y11_08491 a3d26bf5b8169e3327126073c36a0272 217 Gene3D G3DSA:2.30.110.10 19 217 2.8E-76 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Y11_08491 a3d26bf5b8169e3327126073c36a0272 217 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 187 200 - T 13-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Y11_06391 e310baddcb8ef631382419dcbe204655 393 Gene3D G3DSA:3.30.470.20 197 389 4.5E-58 T 13-10-2018 Y11_06391 e310baddcb8ef631382419dcbe204655 393 Gene3D G3DSA:3.30.1490.20 123 196 2.4E-31 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Y11_06391 e310baddcb8ef631382419dcbe204655 393 SUPERFAMILY SSF52440 3 112 1.87E-35 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Y11_06391 e310baddcb8ef631382419dcbe204655 393 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 8 391 51.188 T 13-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 Y11_06391 e310baddcb8ef631382419dcbe204655 393 Gene3D G3DSA:3.40.50.20 2 122 9.8E-54 T 13-10-2018 Y11_06391 e310baddcb8ef631382419dcbe204655 393 Pfam PF02222 ATP-grasp domain 123 295 5.0E-55 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Y11_06391 e310baddcb8ef631382419dcbe204655 393 SUPERFAMILY SSF51246 319 390 5.65E-18 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Y11_06391 e310baddcb8ef631382419dcbe204655 393 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 390 3.2E-187 T 13-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 Y11_06391 e310baddcb8ef631382419dcbe204655 393 SUPERFAMILY SSF56059 113 314 5.13E-55 T 13-10-2018 Y11_07501 f8867cbd7a37a607e7833999e1483cde 182 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 162 1.1E-35 T 13-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase Y11_07501 f8867cbd7a37a607e7833999e1483cde 182 PIRSF PIRSF030780 1 182 5.2E-104 T 13-10-2018 IPR016956 Inner membrane protein YdjM Y11_41861 c9e6480218cd3df9e243d9319a7b87d1 228 Gene3D G3DSA:1.10.4190.10 2 204 1.2E-41 T 13-10-2018 IPR038277 UreF domain superfamily Y11_41861 c9e6480218cd3df9e243d9319a7b87d1 228 Pfam PF01730 UreF 37 185 4.4E-22 T 13-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 Y11_41861 c9e6480218cd3df9e243d9319a7b87d1 228 Hamap MF_01385 Urease accessory protein UreF [ureF]. 5 228 22.134 T 13-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 Y11_41861 c9e6480218cd3df9e243d9319a7b87d1 228 PIRSF PIRSF009467 2 228 3.5E-59 T 13-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 Y11_36181 4e79b6b12d798e13d6e2f21952bccc2e 125 Pfam PF02082 Transcriptional regulator 1 66 1.7E-17 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type Y11_36181 4e79b6b12d798e13d6e2f21952bccc2e 125 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 33 51 - T 13-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Y11_36181 4e79b6b12d798e13d6e2f21952bccc2e 125 Gene3D G3DSA:1.10.10.10 1 120 7.1E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_36181 4e79b6b12d798e13d6e2f21952bccc2e 125 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 112 5.4E-31 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type Y11_36181 4e79b6b12d798e13d6e2f21952bccc2e 125 SUPERFAMILY SSF46785 4 115 1.36E-28 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_00451 53ae394ccee839d3d1ebb67a34dae68a 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 31.954 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 Y11_00451 53ae394ccee839d3d1ebb67a34dae68a 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 7.4E-51 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 Y11_41751 4574b81bdfd3bc0c01d72d1660448a31 527 PIRSF PIRSF002741 26 517 9.1E-77 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Y11_41751 4574b81bdfd3bc0c01d72d1660448a31 527 SUPERFAMILY SSF53850 27 507 1.36E-97 T 13-10-2018 Y11_41751 4574b81bdfd3bc0c01d72d1660448a31 527 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 427 2.6E-80 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain Y11_41751 4574b81bdfd3bc0c01d72d1660448a31 527 Gene3D G3DSA:3.40.190.10 44 510 1.2E-180 T 13-10-2018 Y11_41751 4574b81bdfd3bc0c01d72d1660448a31 527 Gene3D G3DSA:3.10.105.10 252 498 1.2E-180 T 13-10-2018 Y11_25991 a147ff22feff41ca2a5cab3784241a96 234 Gene3D G3DSA:2.60.120.10 134 234 4.8E-35 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_25991 a147ff22feff41ca2a5cab3784241a96 234 SUPERFAMILY SSF51182 1 232 3.5E-48 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_25991 a147ff22feff41ca2a5cab3784241a96 234 Gene3D G3DSA:2.60.120.10 12 133 7.8E-38 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_25991 a147ff22feff41ca2a5cab3784241a96 234 Pfam PF02678 Pirin 5 119 9.9E-22 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Y11_25991 a147ff22feff41ca2a5cab3784241a96 234 PIRSF PIRSF006232 1 232 3.5E-33 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Y11_34041 801214a0a792e2f085f6de069f34de99 206 PIRSF PIRSF006324 1 206 4.9E-41 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Y11_34041 801214a0a792e2f085f6de069f34de99 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 6.8E-62 T 13-10-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 Y11_34041 801214a0a792e2f085f6de069f34de99 206 Pfam PF01810 LysE type translocator 14 205 7.8E-53 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Y11_16111 8b62cc89bc7c1ff954eaf7bd40dbf7bd 467 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 262 452 2.1E-38 T 13-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Y11_16111 8b62cc89bc7c1ff954eaf7bd40dbf7bd 467 Gene3D G3DSA:3.40.50.880 268 419 3.6E-7 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_16111 8b62cc89bc7c1ff954eaf7bd40dbf7bd 467 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 10 195 3.0E-20 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Y11_16111 8b62cc89bc7c1ff954eaf7bd40dbf7bd 467 Gene3D G3DSA:3.40.50.300 7 191 5.5E-29 T 13-10-2018 Y11_16111 8b62cc89bc7c1ff954eaf7bd40dbf7bd 467 SUPERFAMILY SSF52317 268 460 2.04E-28 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_16111 8b62cc89bc7c1ff954eaf7bd40dbf7bd 467 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 6 453 42.446 T 13-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Y11_16111 8b62cc89bc7c1ff954eaf7bd40dbf7bd 467 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 10 453 2.0E-130 T 13-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Y11_16111 8b62cc89bc7c1ff954eaf7bd40dbf7bd 467 SUPERFAMILY SSF52540 8 202 5.8E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_22461 a615c6b195122ac662c065aa5ba5e6a2 113 Gene3D G3DSA:2.60.120.10 1 108 9.0E-24 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_22461 a615c6b195122ac662c065aa5ba5e6a2 113 SUPERFAMILY SSF51182 7 109 1.56E-26 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_22461 a615c6b195122ac662c065aa5ba5e6a2 113 Pfam PF07883 Cupin domain 41 107 5.9E-21 T 13-10-2018 IPR013096 Cupin 2, conserved barrel Y11_24421 d9d1d70f7c18392d27ac74d83a33cf71 209 SMART SM00382 26 207 4.7E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_24421 d9d1d70f7c18392d27ac74d83a33cf71 209 Gene3D G3DSA:3.40.50.300 1 208 2.8E-46 T 13-10-2018 Y11_24421 d9d1d70f7c18392d27ac74d83a33cf71 209 Pfam PF00005 ABC transporter 19 163 1.6E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_24421 d9d1d70f7c18392d27ac74d83a33cf71 209 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_24421 d9d1d70f7c18392d27ac74d83a33cf71 209 SUPERFAMILY SSF52540 6 198 7.5E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_18751 d741d8ffb7b66d40ac0b283dfb0ec982 158 Pfam PF08349 Protein of unknown function (DUF1722) 38 154 7.6E-36 T 13-10-2018 IPR013560 Domain of unknown function DUF1722 Y11_20351 aaf0f1388e50bad764c83958599546e2 101 SUPERFAMILY SSF46767 2 83 9.29E-26 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Y11_20351 aaf0f1388e50bad764c83958599546e2 101 Gene3D G3DSA:1.10.10.10 1 101 1.0E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_20351 aaf0f1388e50bad764c83958599546e2 101 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 3 80 3.7E-16 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Y11_20351 aaf0f1388e50bad764c83958599546e2 101 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 81 1.7E-25 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Y11_37831 2c3dda2ba585a7b41d363a17cb714388 344 Gene3D G3DSA:1.10.260.40 7 68 2.4E-24 T 13-10-2018 Y11_37831 2c3dda2ba585a7b41d363a17cb714388 344 SUPERFAMILY SSF53822 66 325 2.75E-47 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_37831 2c3dda2ba585a7b41d363a17cb714388 344 SUPERFAMILY SSF47413 7 64 1.97E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_37831 2c3dda2ba585a7b41d363a17cb714388 344 SMART SM00354 6 79 5.9E-32 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_37831 2c3dda2ba585a7b41d363a17cb714388 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 56 9.1E-18 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_37831 2c3dda2ba585a7b41d363a17cb714388 344 Pfam PF13377 Periplasmic binding protein-like domain 185 333 1.6E-12 T 13-10-2018 Y11_37831 2c3dda2ba585a7b41d363a17cb714388 344 Gene3D G3DSA:3.40.50.2300 69 155 1.4E-18 T 13-10-2018 Y11_37831 2c3dda2ba585a7b41d363a17cb714388 344 Gene3D G3DSA:3.40.50.2300 161 335 3.7E-31 T 13-10-2018 Y11_37831 2c3dda2ba585a7b41d363a17cb714388 344 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 8 333 1.2E-123 T 13-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 Y11_04061 66cdf724e3ea3e2be4eb5325267c06e1 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 35.995 T 13-10-2018 IPR023745 MSF-type transporter, YcaD Y11_04061 66cdf724e3ea3e2be4eb5325267c06e1 382 SUPERFAMILY SSF103473 6 371 1.44E-41 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_04061 66cdf724e3ea3e2be4eb5325267c06e1 382 Gene3D G3DSA:1.20.1250.20 196 378 4.7E-19 T 13-10-2018 Y11_04061 66cdf724e3ea3e2be4eb5325267c06e1 382 Pfam PF07690 Major Facilitator Superfamily 11 233 8.5E-13 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_04061 66cdf724e3ea3e2be4eb5325267c06e1 382 Gene3D G3DSA:1.20.1250.20 7 188 4.5E-19 T 13-10-2018 Y11_16241 48aafae85cccc80584512109d734a8a5 215 PIRSF PIRSF010130 1 208 3.3E-83 T 13-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Y11_16241 48aafae85cccc80584512109d734a8a5 215 Pfam PF06130 Phosphate propanoyltransferase 23 101 1.7E-25 T 13-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Y11_16241 48aafae85cccc80584512109d734a8a5 215 Pfam PF06130 Phosphate propanoyltransferase 130 196 2.8E-17 T 13-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Y11_17121 15c50e42e90d7cfb109ea051a8dd5fd8 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_17121 15c50e42e90d7cfb109ea051a8dd5fd8 180 Pfam PF12800 4Fe-4S binding domain 9 22 0.16 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_17121 15c50e42e90d7cfb109ea051a8dd5fd8 180 SUPERFAMILY SSF54862 1 169 2.01E-42 T 13-10-2018 Y11_17121 15c50e42e90d7cfb109ea051a8dd5fd8 180 Gene3D G3DSA:3.30.70.20 5 165 5.2E-29 T 13-10-2018 Y11_17121 15c50e42e90d7cfb109ea051a8dd5fd8 180 Gene3D G3DSA:3.30.70.20 63 129 5.2E-29 T 13-10-2018 Y11_17121 15c50e42e90d7cfb109ea051a8dd5fd8 180 Pfam PF00037 4Fe-4S binding domain 82 103 3.6E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_36331 4d46e05019b0046a2fbdc10ed278764e 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 4.4E-27 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Y11_36331 4d46e05019b0046a2fbdc10ed278764e 206 Gene3D G3DSA:3.10.50.40 68 206 2.9E-50 T 13-10-2018 Y11_36331 4d46e05019b0046a2fbdc10ed278764e 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 1.3E-22 T 13-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 Y11_36331 4d46e05019b0046a2fbdc10ed278764e 206 SUPERFAMILY SSF54534 8 205 5.5E-55 T 13-10-2018 Y11_36331 4d46e05019b0046a2fbdc10ed278764e 206 Gene3D G3DSA:1.10.287.460 5 67 4.0E-18 T 13-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 Y11_17981 5cac7a61ea277712dd629270e9015089 310 Gene3D G3DSA:1.20.225.30 243 310 1.7E-33 T 13-10-2018 Y11_17981 5cac7a61ea277712dd629270e9015089 310 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 51.923 T 13-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 Y11_17981 5cac7a61ea277712dd629270e9015089 310 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Y11_17981 5cac7a61ea277712dd629270e9015089 310 PIRSF PIRSF006621 1 310 5.5E-83 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Y11_17981 5cac7a61ea277712dd629270e9015089 310 Pfam PF01207 Dihydrouridine synthase (Dus) 4 298 1.0E-89 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Y11_17981 5cac7a61ea277712dd629270e9015089 310 SUPERFAMILY SSF51395 1 301 6.23E-71 T 13-10-2018 Y11_17981 5cac7a61ea277712dd629270e9015089 310 Gene3D G3DSA:3.20.20.70 1 242 2.7E-86 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_37001 dbdd833052725a914d4732c9e8597d66 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 3.7E-13 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Y11_37001 dbdd833052725a914d4732c9e8597d66 95 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 86 1.1E-8 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Y11_37001 dbdd833052725a914d4732c9e8597d66 95 SUPERFAMILY SSF143011 1 82 1.7E-21 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Y11_37001 dbdd833052725a914d4732c9e8597d66 95 Gene3D G3DSA:3.30.2310.20 1 95 2.9E-28 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Y11_34931 cfd3bc97958d7a2861c2e66d033ff798 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 7.7E-32 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_34931 cfd3bc97958d7a2861c2e66d033ff798 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 49 5.7E-15 T 13-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_34931 cfd3bc97958d7a2861c2e66d033ff798 122 SUPERFAMILY SSF48300 4 58 4.32E-15 T 13-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_34931 cfd3bc97958d7a2861c2e66d033ff798 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 2.0E-27 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_34931 cfd3bc97958d7a2861c2e66d033ff798 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 4.5E-48 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_34931 cfd3bc97958d7a2861c2e66d033ff798 122 Gene3D G3DSA:3.30.1390.10 52 122 8.2E-33 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Y11_34931 cfd3bc97958d7a2861c2e66d033ff798 122 SUPERFAMILY SSF54736 51 122 1.05E-25 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Y11_34931 cfd3bc97958d7a2861c2e66d033ff798 122 Gene3D G3DSA:1.20.5.710 3 51 1.5E-21 T 13-10-2018 Y11_34931 cfd3bc97958d7a2861c2e66d033ff798 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 122 25.266 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_29011 36233a8ee643715f2c7a4203e9eca6b1 183 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 46 2.2E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Y11_29011 36233a8ee643715f2c7a4203e9eca6b1 183 Gene3D G3DSA:1.10.357.10 1 183 1.1E-69 T 13-10-2018 Y11_29011 36233a8ee643715f2c7a4203e9eca6b1 183 ProSitePatterns PS01081 TetR-type HTH domain signature. 13 43 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Y11_29011 36233a8ee643715f2c7a4203e9eca6b1 183 SUPERFAMILY SSF46689 5 60 1.04E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_29011 36233a8ee643715f2c7a4203e9eca6b1 183 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 183 36.798 T 13-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 Y11_29011 36233a8ee643715f2c7a4203e9eca6b1 183 SUPERFAMILY SSF48498 71 178 7.23E-6 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Y11_30441 695efea3918dc8dc18a1a2117e6d8184 649 Gene3D G3DSA:1.20.1440.210 135 245 1.3E-10 T 13-10-2018 Y11_30441 695efea3918dc8dc18a1a2117e6d8184 649 Gene3D G3DSA:1.10.287.950 309 612 1.5E-93 T 13-10-2018 Y11_30441 695efea3918dc8dc18a1a2117e6d8184 649 Gene3D G3DSA:1.20.1440.210 57 272 1.3E-10 T 13-10-2018 Y11_30441 695efea3918dc8dc18a1a2117e6d8184 649 Pfam PF00672 HAMP domain 310 358 2.1E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_30441 695efea3918dc8dc18a1a2117e6d8184 649 SUPERFAMILY SSF58104 330 612 6.93E-75 T 13-10-2018 Y11_30441 695efea3918dc8dc18a1a2117e6d8184 649 SMART SM00304 310 362 7.3E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_30441 695efea3918dc8dc18a1a2117e6d8184 649 SMART SM00283 363 610 2.4E-90 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_30441 695efea3918dc8dc18a1a2117e6d8184 649 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 422 577 3.4E-56 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_30441 695efea3918dc8dc18a1a2117e6d8184 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 413 7.1E-59 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_30441 695efea3918dc8dc18a1a2117e6d8184 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 461 488 7.1E-59 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_30441 695efea3918dc8dc18a1a2117e6d8184 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 490 519 7.1E-59 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_30441 695efea3918dc8dc18a1a2117e6d8184 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 538 567 7.1E-59 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_30441 695efea3918dc8dc18a1a2117e6d8184 649 SMART SM01358 39 288 2.4E-50 T 13-10-2018 IPR032255 Helical bimodular sensor domain Y11_30441 695efea3918dc8dc18a1a2117e6d8184 649 Pfam PF16591 Helical bimodular sensor domain 57 278 1.9E-16 T 13-10-2018 IPR032255 Helical bimodular sensor domain Y11_38261 edb5be3d78b1d39837676c85a5e94027 288 Pfam PF06445 GyrI-like small molecule binding domain 127 287 5.3E-25 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain Y11_38261 edb5be3d78b1d39837676c85a5e94027 288 SUPERFAMILY SSF55136 122 287 4.53E-56 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Y11_38261 edb5be3d78b1d39837676c85a5e94027 288 Gene3D G3DSA:1.10.10.60 3 55 1.2E-26 T 13-10-2018 Y11_38261 edb5be3d78b1d39837676c85a5e94027 288 SUPERFAMILY SSF46689 57 107 5.82E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_38261 edb5be3d78b1d39837676c85a5e94027 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 4.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_38261 edb5be3d78b1d39837676c85a5e94027 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 4.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_38261 edb5be3d78b1d39837676c85a5e94027 288 Gene3D G3DSA:1.10.10.60 56 121 1.4E-20 T 13-10-2018 Y11_38261 edb5be3d78b1d39837676c85a5e94027 288 Pfam PF12833 Helix-turn-helix domain 27 105 1.6E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_38261 edb5be3d78b1d39837676c85a5e94027 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Y11_38261 edb5be3d78b1d39837676c85a5e94027 288 Gene3D G3DSA:3.20.80.10 122 288 3.5E-49 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Y11_38261 edb5be3d78b1d39837676c85a5e94027 288 SMART SM00871 126 287 9.2E-21 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding Y11_38261 edb5be3d78b1d39837676c85a5e94027 288 SUPERFAMILY SSF46689 6 55 6.72E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_38261 edb5be3d78b1d39837676c85a5e94027 288 SMART SM00342 21 104 3.0E-31 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 ProSitePatterns PS01229 Hypothetical cof family signature 2. 578 600 - T 13-10-2018 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 384 390 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 Pfam PF00702 haloacid dehalogenase-like hydrolase 378 591 1.6E-37 T 13-10-2018 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 Gene3D G3DSA:2.70.150.20 181 286 8.6E-31 T 13-10-2018 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 154 656 7.6E-81 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 131 680 3.0E-174 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 SUPERFAMILY SSF81653 184 281 1.44E-20 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 Pfam PF00403 Heavy-metal-associated domain 1 53 1.2E-8 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 Pfam PF00122 E1-E2 ATPase 182 361 1.0E-44 T 13-10-2018 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 382 396 8.2E-29 T 13-10-2018 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 231 245 8.2E-29 T 13-10-2018 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 505 516 8.2E-29 T 13-10-2018 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 527 537 8.2E-29 T 13-10-2018 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 578 597 8.2E-29 T 13-10-2018 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 601 613 8.2E-29 T 13-10-2018 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 SUPERFAMILY SSF81665 133 666 6.41E-17 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 Gene3D G3DSA:3.30.70.100 1 60 1.4E-12 T 13-10-2018 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 PRINTS PR00941 Cadmium-transporting ATPase signature 7 28 3.4E-7 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 PRINTS PR00941 Cadmium-transporting ATPase signature 166 186 3.4E-7 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 PRINTS PR00941 Cadmium-transporting ATPase signature 186 202 3.4E-7 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 PRINTS PR00941 Cadmium-transporting ATPase signature 247 263 3.4E-7 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 SUPERFAMILY SSF55008 1 56 1.24E-10 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 SUPERFAMILY SSF56784 380 678 8.25E-53 T 13-10-2018 IPR036412 HAD-like superfamily Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 Gene3D G3DSA:3.40.50.1000 363 629 3.1E-82 T 13-10-2018 IPR023214 HAD superfamily Y11_34181 f2fac8cf97b230bfca62beb690c6d592 686 Gene3D G3DSA:3.40.1110.10 393 512 3.1E-82 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Y11_27201 29d68fe5269dab4b1cc48d1397350813 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Y11_27201 29d68fe5269dab4b1cc48d1397350813 154 SUPERFAMILY SSF51230 79 154 3.27E-26 T 13-10-2018 IPR011053 Single hybrid motif Y11_27201 29d68fe5269dab4b1cc48d1397350813 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 2.9E-65 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Y11_27201 29d68fe5269dab4b1cc48d1397350813 154 Pfam PF00364 Biotin-requiring enzyme 81 153 6.2E-25 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Y11_27201 29d68fe5269dab4b1cc48d1397350813 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 1.9E-18 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Y11_27201 29d68fe5269dab4b1cc48d1397350813 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 1.9E-18 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Y11_27201 29d68fe5269dab4b1cc48d1397350813 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 1.9E-18 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Y11_27201 29d68fe5269dab4b1cc48d1397350813 154 Gene3D G3DSA:2.40.50.100 75 154 1.2E-31 T 13-10-2018 Y11_32611 af70cc21160b4278d805e0d90b0e3a5c 200 Pfam PF01810 LysE type translocator 16 189 1.1E-15 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Y11_26171 d983dc15bba7359ea9a9888fe1c3cdb2 94 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 3 93 2.7E-32 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 Y11_26171 d983dc15bba7359ea9a9888fe1c3cdb2 94 SUPERFAMILY SSF52980 4 90 8.04E-17 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Y11_26171 d983dc15bba7359ea9a9888fe1c3cdb2 94 Gene3D G3DSA:3.40.1350.10 2 94 6.2E-26 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Y11_26171 d983dc15bba7359ea9a9888fe1c3cdb2 94 Pfam PF02021 Uncharacterised protein family UPF0102 4 79 1.1E-18 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 Y11_11001 00df34d559e309e07ea13f73afd68d6e 545 PIRSF PIRSF002741 8 545 8.6E-107 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Y11_11001 00df34d559e309e07ea13f73afd68d6e 545 Gene3D G3DSA:3.40.190.10 43 525 5.3E-192 T 13-10-2018 Y11_11001 00df34d559e309e07ea13f73afd68d6e 545 Gene3D G3DSA:3.90.76.10 72 195 5.3E-192 T 13-10-2018 Y11_11001 00df34d559e309e07ea13f73afd68d6e 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 464 1.0E-82 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain Y11_11001 00df34d559e309e07ea13f73afd68d6e 545 SUPERFAMILY SSF53850 39 526 5.43E-140 T 13-10-2018 Y11_11001 00df34d559e309e07ea13f73afd68d6e 545 Gene3D G3DSA:3.10.105.10 298 513 5.3E-192 T 13-10-2018 Y11_40881 ba2e01b3ecac6ab1887fd93dbbbc4e09 368 Gene3D G3DSA:3.30.70.2810 1 80 7.3E-34 T 13-10-2018 Y11_40881 ba2e01b3ecac6ab1887fd93dbbbc4e09 368 Gene3D G3DSA:3.30.2300.20 81 176 8.5E-39 T 13-10-2018 Y11_40881 ba2e01b3ecac6ab1887fd93dbbbc4e09 368 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 2 356 85.027 T 13-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 Y11_40881 ba2e01b3ecac6ab1887fd93dbbbc4e09 368 Gene3D G3DSA:3.40.50.150 177 358 2.2E-56 T 13-10-2018 Y11_40881 ba2e01b3ecac6ab1887fd93dbbbc4e09 368 PIRSF PIRSF028774 2 361 2.8E-191 T 13-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 Y11_40881 ba2e01b3ecac6ab1887fd93dbbbc4e09 368 SUPERFAMILY SSF53335 185 296 2.63E-11 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_40881 ba2e01b3ecac6ab1887fd93dbbbc4e09 368 Pfam PF01728 FtsJ-like methyltransferase 187 262 7.3E-7 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Y11_15911 9875cba78201c45eda635b944cf85c4d 211 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 200 6.2E-52 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Y11_15911 9875cba78201c45eda635b944cf85c4d 211 PIRSF PIRSF000709 2 189 5.6E-8 T 13-10-2018 Y11_15911 9875cba78201c45eda635b944cf85c4d 211 SUPERFAMILY SSF53254 1 203 6.71E-54 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Y11_15911 9875cba78201c45eda635b944cf85c4d 211 SMART SM00855 2 162 6.6E-20 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Y11_15911 9875cba78201c45eda635b944cf85c4d 211 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 187 3.4E-49 T 13-10-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Y11_15911 9875cba78201c45eda635b944cf85c4d 211 Gene3D G3DSA:3.40.50.1240 1 209 2.7E-54 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Y11_15911 9875cba78201c45eda635b944cf85c4d 211 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 13-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Y11_30231 585089d07928aa65bdb7c27cdb005885 687 PIRSF PIRSF036917 1 685 0.0 T 13-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 Y11_30231 585089d07928aa65bdb7c27cdb005885 687 Pfam PF00128 Alpha amylase, catalytic domain 228 605 2.1E-36 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Y11_30231 585089d07928aa65bdb7c27cdb005885 687 SUPERFAMILY SSF51445 179 655 9.29E-75 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_30231 585089d07928aa65bdb7c27cdb005885 687 SMART SM00642 195 646 1.1E-77 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Y11_30231 585089d07928aa65bdb7c27cdb005885 687 Gene3D G3DSA:3.20.20.80 426 653 1.5E-31 T 13-10-2018 Y11_30231 585089d07928aa65bdb7c27cdb005885 687 Gene3D G3DSA:3.20.20.80 184 408 5.0E-46 T 13-10-2018 Y11_36601 54e5b578902c1fb88c53421476809ce9 219 SMART SM00862 145 216 1.2E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_36601 54e5b578902c1fb88c53421476809ce9 219 Gene3D G3DSA:1.10.10.10 122 218 9.5E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_36601 54e5b578902c1fb88c53421476809ce9 219 SUPERFAMILY SSF52172 1 175 9.23E-38 T 13-10-2018 IPR011006 CheY-like superfamily Y11_36601 54e5b578902c1fb88c53421476809ce9 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.6E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_36601 54e5b578902c1fb88c53421476809ce9 219 SMART SM00448 1 112 8.8E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_36601 54e5b578902c1fb88c53421476809ce9 219 Pfam PF00072 Response regulator receiver domain 4 113 6.6E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_36601 54e5b578902c1fb88c53421476809ce9 219 Gene3D G3DSA:3.40.50.2300 1 121 5.4E-38 T 13-10-2018 Y11_40701 6b3ce9913a222cbcaf4f038049e22a4c 178 Gene3D G3DSA:3.30.700.10 25 153 1.3E-5 T 13-10-2018 Y11_40701 6b3ce9913a222cbcaf4f038049e22a4c 178 Pfam PF07963 Prokaryotic N-terminal methylation motif 19 40 1.7E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Y11_40701 6b3ce9913a222cbcaf4f038049e22a4c 178 SUPERFAMILY SSF54523 25 170 2.98E-12 T 13-10-2018 Y11_40701 6b3ce9913a222cbcaf4f038049e22a4c 178 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 42 3.8E-4 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Y11_23821 011539b2c6692a4132f5a1d51823311c 349 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 2 316 3.3E-61 T 13-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain Y11_23821 011539b2c6692a4132f5a1d51823311c 349 Gene3D G3DSA:3.90.245.10 1 326 4.2E-78 T 13-10-2018 IPR036452 Ribonucleoside hydrolase-like Y11_23821 011539b2c6692a4132f5a1d51823311c 349 SUPERFAMILY SSF53590 2 322 1.24E-69 T 13-10-2018 IPR036452 Ribonucleoside hydrolase-like Y11_38061 5d3987fe6d2433648a6c44f1fb63e93b 451 SMART SM00941 361 435 3.8E-33 T 13-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_38061 5d3987fe6d2433648a6c44f1fb63e93b 451 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 362 434 2.5E-25 T 13-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_38061 5d3987fe6d2433648a6c44f1fb63e93b 451 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 16 434 4.6E-167 T 13-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_38061 5d3987fe6d2433648a6c44f1fb63e93b 451 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 124 139 - T 13-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_38061 5d3987fe6d2433648a6c44f1fb63e93b 451 Hamap MF_01628 Thymidine phosphorylase [deoA]. 13 449 47.267 T 13-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 Y11_38061 5d3987fe6d2433648a6c44f1fb63e93b 451 SUPERFAMILY SSF52418 86 344 1.96E-87 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_38061 5d3987fe6d2433648a6c44f1fb63e93b 451 Gene3D G3DSA:3.90.1170.30 348 444 4.6E-33 T 13-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_38061 5d3987fe6d2433648a6c44f1fb63e93b 451 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 13 449 9.6E-229 T 13-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 Y11_38061 5d3987fe6d2433648a6c44f1fb63e93b 451 Pfam PF00591 Glycosyl transferase family, a/b domain 90 320 2.2E-51 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_38061 5d3987fe6d2433648a6c44f1fb63e93b 451 Pfam PF02885 Glycosyl transferase family, helical bundle domain 17 78 2.3E-18 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_38061 5d3987fe6d2433648a6c44f1fb63e93b 451 SUPERFAMILY SSF47648 14 81 3.79E-21 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_38061 5d3987fe6d2433648a6c44f1fb63e93b 451 SUPERFAMILY SSF54680 348 450 2.22E-32 T 13-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_38061 5d3987fe6d2433648a6c44f1fb63e93b 451 Gene3D G3DSA:1.20.970.10 18 206 9.4E-131 T 13-10-2018 Y11_38061 5d3987fe6d2433648a6c44f1fb63e93b 451 Gene3D G3DSA:3.40.1030.10 81 333 9.4E-131 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_38061 5d3987fe6d2433648a6c44f1fb63e93b 451 PIRSF PIRSF000478 12 450 8.5E-154 T 13-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_36051 ac381d48d678f7d9e753b4dc008ddf19 384 Pfam PF13484 4Fe-4S double cluster binding domain 197 261 4.8E-19 T 13-10-2018 Y11_36051 ac381d48d678f7d9e753b4dc008ddf19 384 SUPERFAMILY SSF46548 144 261 5.75E-20 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Y11_36051 ac381d48d678f7d9e753b4dc008ddf19 384 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 320 51.073 T 13-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 Y11_36051 ac381d48d678f7d9e753b4dc008ddf19 384 Pfam PF08331 Domain of unknown function (DUF1730) 62 145 4.6E-21 T 13-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 Y11_36051 ac381d48d678f7d9e753b4dc008ddf19 384 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 353 1.2E-148 T 13-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 Y11_36051 ac381d48d678f7d9e753b4dc008ddf19 384 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 198 209 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_03641 5b882bbe9592f96d2a3febd97b560315 369 PIRSF PIRSF019574 1 369 1.9E-142 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Y11_03641 5b882bbe9592f96d2a3febd97b560315 369 Pfam PF13416 Bacterial extracellular solute-binding protein 46 334 9.6E-33 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein Y11_03641 5b882bbe9592f96d2a3febd97b560315 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 218 237 7.0E-76 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Y11_03641 5b882bbe9592f96d2a3febd97b560315 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 268 287 7.0E-76 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Y11_03641 5b882bbe9592f96d2a3febd97b560315 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 313 339 7.0E-76 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Y11_03641 5b882bbe9592f96d2a3febd97b560315 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 157 171 7.0E-76 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Y11_03641 5b882bbe9592f96d2a3febd97b560315 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 7.0E-76 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Y11_03641 5b882bbe9592f96d2a3febd97b560315 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 180 199 7.0E-76 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Y11_03641 5b882bbe9592f96d2a3febd97b560315 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 7.0E-76 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Y11_03641 5b882bbe9592f96d2a3febd97b560315 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 91 7.0E-76 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Y11_03641 5b882bbe9592f96d2a3febd97b560315 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 126 142 7.0E-76 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Y11_03641 5b882bbe9592f96d2a3febd97b560315 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 34 50 7.0E-76 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Y11_03641 5b882bbe9592f96d2a3febd97b560315 369 SUPERFAMILY SSF53850 28 368 9.62E-104 T 13-10-2018 Y11_03641 5b882bbe9592f96d2a3febd97b560315 369 Gene3D G3DSA:3.40.190.10 31 337 6.7E-141 T 13-10-2018 Y11_03641 5b882bbe9592f96d2a3febd97b560315 369 Gene3D G3DSA:3.40.190.10 135 363 6.7E-141 T 13-10-2018 Y11_20221 b259192942a58079733aeecdfdcd4d2a 421 Gene3D G3DSA:3.40.720.10 3 413 1.8E-87 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Y11_20221 b259192942a58079733aeecdfdcd4d2a 421 Gene3D G3DSA:3.30.70.1250 103 233 1.8E-87 T 13-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Y11_20221 b259192942a58079733aeecdfdcd4d2a 421 Pfam PF01676 Metalloenzyme superfamily 3 402 2.0E-38 T 13-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Y11_20221 b259192942a58079733aeecdfdcd4d2a 421 PIRSF PIRSF001491 1 417 7.0E-102 T 13-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Y11_20221 b259192942a58079733aeecdfdcd4d2a 421 SUPERFAMILY SSF53649 2 416 1.57E-48 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Y11_37401 36a6fc0c2a117d13476f5f0daa5dfe35 91 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 90 6.7E-13 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Y11_37401 36a6fc0c2a117d13476f5f0daa5dfe35 91 Gene3D G3DSA:3.30.2310.20 1 91 3.0E-12 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Y11_19131 cfa55525f8b344009b7c8f4c3ca75a1b 246 SUPERFAMILY SSF161098 24 223 1.18E-36 T 13-10-2018 IPR035906 MetI-like superfamily Y11_19131 cfa55525f8b344009b7c8f4c3ca75a1b 246 Gene3D G3DSA:1.10.3720.10 18 238 1.1E-43 T 13-10-2018 IPR035906 MetI-like superfamily Y11_19131 cfa55525f8b344009b7c8f4c3ca75a1b 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 237 3.5E-25 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_19131 cfa55525f8b344009b7c8f4c3ca75a1b 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 132 3.5E-15 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 306 891 3.3E-288 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 SUPERFAMILY SSF46955 3 50 2.2E-13 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 Gene3D G3DSA:3.40.50.10050 685 792 5.6E-37 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 Gene3D G3DSA:2.40.30.10 563 681 7.6E-40 T 13-10-2018 Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 Pfam PF11987 Translation-initiation factor 2 676 781 2.0E-36 T 13-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 394 549 1.4E-30 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 889 17.527 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 Gene3D G3DSA:3.40.50.300 389 562 4.5E-72 T 13-10-2018 Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 ProSitePatterns PS01176 Initiation factor 2 signature. 842 864 - T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 Gene3D G3DSA:2.40.30.10 793 890 2.0E-34 T 13-10-2018 Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 Pfam PF00009 Elongation factor Tu GTP binding domain 395 552 9.0E-35 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 3.2E-8 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 314 364 2.4E-14 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 SMART SM00173 388 557 0.0029 T 13-10-2018 Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 57 94 4.6E-16 T 13-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 SUPERFAMILY SSF52156 669 798 9.42E-38 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 SUPERFAMILY SSF52540 391 559 3.42E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 SUPERFAMILY SSF50447 565 646 4.52E-23 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 Pfam PF03144 Elongation factor Tu domain 2 812 879 8.0E-8 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 SUPERFAMILY SSF50447 792 889 5.3E-35 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Y11_36711 a79a61b1066c9bb6cc4faa4bfa7878be 892 Gene3D G3DSA:3.30.56.50 2 50 7.8E-27 T 13-10-2018 Y11_12221 e9124bcbe9b73b523ac7b2059b51a8ed 341 Gene3D G3DSA:3.40.630.10 10 339 9.4E-107 T 13-10-2018 Y11_12221 e9124bcbe9b73b523ac7b2059b51a8ed 341 PIRSF PIRSF017020 10 339 1.9E-114 T 13-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 Y11_12221 e9124bcbe9b73b523ac7b2059b51a8ed 341 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 14 331 2.9E-136 T 13-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 Y11_12221 e9124bcbe9b73b523ac7b2059b51a8ed 341 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 55 333 1.8E-59 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Y11_12221 e9124bcbe9b73b523ac7b2059b51a8ed 341 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 341 142.88 T 13-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 Y11_12221 e9124bcbe9b73b523ac7b2059b51a8ed 341 SUPERFAMILY SSF53187 12 331 1.12E-85 T 13-10-2018 Y11_34881 3cfb8b73f72ef042f4014c4fd43cbc79 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Y11_34881 3cfb8b73f72ef042f4014c4fd43cbc79 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Y11_34881 3cfb8b73f72ef042f4014c4fd43cbc79 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Y11_34881 3cfb8b73f72ef042f4014c4fd43cbc79 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.9E-20 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Y11_34881 3cfb8b73f72ef042f4014c4fd43cbc79 127 Gene3D G3DSA:1.20.5.1030 66 123 4.9E-16 T 13-10-2018 IPR038379 SecE superfamily Y11_34881 3cfb8b73f72ef042f4014c4fd43cbc79 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.8E-38 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Y11_34881 3cfb8b73f72ef042f4014c4fd43cbc79 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 1.8E-38 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Y11_34881 3cfb8b73f72ef042f4014c4fd43cbc79 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.8E-38 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Y11_34881 3cfb8b73f72ef042f4014c4fd43cbc79 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.8E-38 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Y11_41271 e2731c1b5178da15b01f20064664e180 227 Gene3D G3DSA:2.40.128.300 20 111 1.2E-27 T 13-10-2018 Y11_41271 e2731c1b5178da15b01f20064664e180 227 Pfam PF17185 NlpE C-terminal OB domain 136 225 7.1E-37 T 13-10-2018 IPR033450 NlpE, C-terminal OB domain Y11_41271 e2731c1b5178da15b01f20064664e180 227 Gene3D G3DSA:2.40.50.540 138 227 1.8E-31 T 13-10-2018 IPR038139 NlpE, C-terminal domain superfamily Y11_41271 e2731c1b5178da15b01f20064664e180 227 Pfam PF04170 NlpE N-terminal domain 38 123 9.5E-24 T 13-10-2018 IPR007298 Copper resistance lipoprotein NlpE Y11_42071 3dc763e56f7272e04bace9b5ccd4ff45 501 Gene3D G3DSA:3.30.750.24 404 498 1.2E-25 T 13-10-2018 IPR036513 STAS domain superfamily Y11_42071 3dc763e56f7272e04bace9b5ccd4ff45 501 Pfam PF01740 STAS domain 421 484 9.9E-6 T 13-10-2018 IPR002645 STAS domain Y11_42071 3dc763e56f7272e04bace9b5ccd4ff45 501 Pfam PF00916 Sulfate permease family 166 372 2.6E-22 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Y11_42071 3dc763e56f7272e04bace9b5ccd4ff45 501 Pfam PF00916 Sulfate permease family 33 160 2.3E-17 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Y11_42071 3dc763e56f7272e04bace9b5ccd4ff45 501 SUPERFAMILY SSF52091 413 485 1.71E-9 T 13-10-2018 IPR036513 STAS domain superfamily Y11_09351 25c37255df04ea870ba3d853ddd6a364 39 Pfam PF02371 Transposase IS116/IS110/IS902 family 1 32 9.4E-7 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_36151 8ed6b93c3472576436ba3ceadb70c7c0 334 Gene3D G3DSA:3.30.479.30 53 231 2.9E-15 T 13-10-2018 Y11_36151 8ed6b93c3472576436ba3ceadb70c7c0 334 SMART SM00244 18 225 1.3E-41 T 13-10-2018 IPR001107 Band 7 domain Y11_36151 8ed6b93c3472576436ba3ceadb70c7c0 334 PIRSF PIRSF005651 1 334 8.8E-107 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Y11_36151 8ed6b93c3472576436ba3ceadb70c7c0 334 Pfam PF01145 SPFH domain / Band 7 family 22 241 2.8E-34 T 13-10-2018 IPR001107 Band 7 domain Y11_36151 8ed6b93c3472576436ba3ceadb70c7c0 334 SUPERFAMILY SSF117892 56 231 1.96E-22 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily Y11_36151 8ed6b93c3472576436ba3ceadb70c7c0 334 TIGRFAM TIGR01932 hflC: HflC protein 1 325 2.3E-139 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Y11_18931 98ec5e485d0189256090db08d9afe815 148 Gene3D G3DSA:1.10.10.10 1 83 5.6E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_18931 98ec5e485d0189256090db08d9afe815 148 Pfam PF01475 Ferric uptake regulator family 11 130 1.2E-46 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Y11_18931 98ec5e485d0189256090db08d9afe815 148 Gene3D G3DSA:3.30.1490.190 85 143 1.8E-24 T 13-10-2018 Y11_18931 98ec5e485d0189256090db08d9afe815 148 SUPERFAMILY SSF46785 5 134 5.19E-44 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_14231 6c542a03630d7b38b645de8f8f6dd04c 455 SUPERFAMILY SSF52540 109 379 1.17E-91 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_14231 6c542a03630d7b38b645de8f8f6dd04c 455 Gene3D G3DSA:3.40.50.12240 21 455 4.7E-168 T 13-10-2018 Y11_14231 6c542a03630d7b38b645de8f8f6dd04c 455 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 30 451 2.0E-197 T 13-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_14231 6c542a03630d7b38b645de8f8f6dd04c 455 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 8 453 2.4E-191 T 13-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_14231 6c542a03630d7b38b645de8f8f6dd04c 455 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_14231 6c542a03630d7b38b645de8f8f6dd04c 455 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 162 373 5.8E-71 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_14231 6c542a03630d7b38b645de8f8f6dd04c 455 SMART SM00382 174 357 4.9E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_09721 9e683719e25f291e941d3fb16588c66d 344 Pfam PF05707 Zonular occludens toxin (Zot) 3 211 4.7E-23 T 13-10-2018 IPR008900 Zona occludens toxin Y11_09721 9e683719e25f291e941d3fb16588c66d 344 Gene3D G3DSA:3.40.50.300 1 209 7.1E-39 T 13-10-2018 Y11_28761 4bd450ee18c425ef17b5d6dc8b0b818c 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 83 242 1.4E-73 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Y11_28761 4bd450ee18c425ef17b5d6dc8b0b818c 273 SMART SM00971 9 113 4.7E-60 T 13-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Y11_28761 4bd450ee18c425ef17b5d6dc8b0b818c 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 6.2E-10 T 13-10-2018 IPR001451 Hexapeptide repeat Y11_28761 4bd450ee18c425ef17b5d6dc8b0b818c 273 Gene3D G3DSA:2.160.10.10 143 273 2.0E-38 T 13-10-2018 Y11_28761 4bd450ee18c425ef17b5d6dc8b0b818c 273 SUPERFAMILY SSF51161 9 260 2.63E-66 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Y11_28761 4bd450ee18c425ef17b5d6dc8b0b818c 273 PIRSF PIRSF000441 75 265 6.1E-59 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Y11_28761 4bd450ee18c425ef17b5d6dc8b0b818c 273 Gene3D G3DSA:1.10.3130.10 1 142 8.6E-52 T 13-10-2018 Y11_28761 4bd450ee18c425ef17b5d6dc8b0b818c 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Y11_28761 4bd450ee18c425ef17b5d6dc8b0b818c 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 3.0E-37 T 13-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Y11_43251 7d08148aeed3256a7a6f39a74ac29147 467 Pfam PF01136 Peptidase family U32 89 356 3.3E-96 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Y11_43251 7d08148aeed3256a7a6f39a74ac29147 467 ProSitePatterns PS01276 Peptidase family U32 signature. 175 193 - T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Y11_43251 7d08148aeed3256a7a6f39a74ac29147 467 Pfam PF16325 Peptidase family U32 C-terminal domain 372 453 4.1E-21 T 13-10-2018 IPR032525 Peptidase family U32, C-terminal Y11_43251 7d08148aeed3256a7a6f39a74ac29147 467 Gene3D G3DSA:2.40.30.10 368 454 3.3E-10 T 13-10-2018 Y11_02961 4af70e20e70c4af3a6a512a5208cafaf 75 PIRSF PIRSF006188 1 72 3.7E-35 T 13-10-2018 IPR009857 Uncharacterised protein family UPF0352 Y11_02961 4af70e20e70c4af3a6a512a5208cafaf 75 SUPERFAMILY SSF158651 1 75 2.09E-31 T 13-10-2018 IPR023202 YejL-like superfamily Y11_02961 4af70e20e70c4af3a6a512a5208cafaf 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.627 T 13-10-2018 IPR009857 Uncharacterised protein family UPF0352 Y11_02961 4af70e20e70c4af3a6a512a5208cafaf 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 1.3E-23 T 13-10-2018 IPR009857 Uncharacterised protein family UPF0352 Y11_02961 4af70e20e70c4af3a6a512a5208cafaf 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 2.0E-27 T 13-10-2018 IPR009857 Uncharacterised protein family UPF0352 Y11_02961 4af70e20e70c4af3a6a512a5208cafaf 75 Gene3D G3DSA:1.10.3390.10 1 75 9.3E-35 T 13-10-2018 IPR023202 YejL-like superfamily Y11_38181 ae241d9c979ab4c3239907f5e2ed11f9 169 PRINTS PR01021 OMPA domain signature 111 127 3.7E-10 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Y11_38181 ae241d9c979ab4c3239907f5e2ed11f9 169 PRINTS PR01021 OMPA domain signature 66 88 3.7E-10 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Y11_38181 ae241d9c979ab4c3239907f5e2ed11f9 169 PRINTS PR01021 OMPA domain signature 96 111 3.7E-10 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Y11_38181 ae241d9c979ab4c3239907f5e2ed11f9 169 Gene3D G3DSA:3.30.1330.60 32 168 1.3E-39 T 13-10-2018 IPR036737 OmpA-like domain superfamily Y11_38181 ae241d9c979ab4c3239907f5e2ed11f9 169 SUPERFAMILY SSF103088 52 166 6.41E-31 T 13-10-2018 IPR036737 OmpA-like domain superfamily Y11_38181 ae241d9c979ab4c3239907f5e2ed11f9 169 Pfam PF00691 OmpA family 66 160 5.7E-16 T 13-10-2018 IPR006665 OmpA-like domain Y11_38181 ae241d9c979ab4c3239907f5e2ed11f9 169 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 111 128 1.9E-9 T 13-10-2018 Y11_38181 ae241d9c979ab4c3239907f5e2ed11f9 169 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 149 169 1.9E-9 T 13-10-2018 Y11_38181 ae241d9c979ab4c3239907f5e2ed11f9 169 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 82 108 1.9E-9 T 13-10-2018 Y11_38181 ae241d9c979ab4c3239907f5e2ed11f9 169 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 129 148 1.9E-9 T 13-10-2018 Y11_26501 386e90f2ae220fddcb139544c8249a30 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 3.2E-69 T 13-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding Y11_26501 386e90f2ae220fddcb139544c8249a30 477 PRINTS PR00045 Sigma-54 factor signature 186 203 7.3E-32 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Y11_26501 386e90f2ae220fddcb139544c8249a30 477 PRINTS PR00045 Sigma-54 factor signature 376 388 7.3E-32 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Y11_26501 386e90f2ae220fddcb139544c8249a30 477 PRINTS PR00045 Sigma-54 factor signature 450 468 7.3E-32 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Y11_26501 386e90f2ae220fddcb139544c8249a30 477 PRINTS PR00045 Sigma-54 factor signature 392 403 7.3E-32 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Y11_26501 386e90f2ae220fddcb139544c8249a30 477 PIRSF PIRSF000774 1 477 1.4E-147 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Y11_26501 386e90f2ae220fddcb139544c8249a30 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 474 5.2E-158 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Y11_26501 386e90f2ae220fddcb139544c8249a30 477 Gene3D G3DSA:1.10.10.1330 116 251 6.7E-25 T 13-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily Y11_26501 386e90f2ae220fddcb139544c8249a30 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 4.0E-15 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Y11_26501 386e90f2ae220fddcb139544c8249a30 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Y11_26501 386e90f2ae220fddcb139544c8249a30 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 1.2E-60 T 13-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 Y11_26501 386e90f2ae220fddcb139544c8249a30 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Y11_26501 386e90f2ae220fddcb139544c8249a30 477 Gene3D G3DSA:1.10.10.60 417 474 1.9E-22 T 13-10-2018 Y11_30831 eac65fdf0d6c1d00a1cc98284732ac68 281 SUPERFAMILY SSF56935 2 281 3.34E-55 T 13-10-2018 Y11_30831 eac65fdf0d6c1d00a1cc98284732ac68 281 Gene3D G3DSA:2.40.170.10 1 281 1.3E-55 T 13-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 Y11_30831 eac65fdf0d6c1d00a1cc98284732ac68 281 Pfam PF02264 LamB porin 2 281 1.5E-52 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Y11_30831 eac65fdf0d6c1d00a1cc98284732ac68 281 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 61 276 4.0E-17 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Y11_16561 5941a54df7eac339c2da376aabc7d610 196 SUPERFAMILY SSF52317 3 195 2.6E-53 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_16561 5941a54df7eac339c2da376aabc7d610 196 PIRSF PIRSF000495 1 196 9.1E-64 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Y11_16561 5941a54df7eac339c2da376aabc7d610 196 Gene3D G3DSA:3.40.50.880 1 196 1.3E-68 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_16561 5941a54df7eac339c2da376aabc7d610 196 Pfam PF00117 Glutamine amidotransferase class-I 36 194 1.3E-18 T 13-10-2018 IPR017926 Glutamine amidotransferase Y11_16561 5941a54df7eac339c2da376aabc7d610 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-5 T 13-10-2018 Y11_16561 5941a54df7eac339c2da376aabc7d610 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 9.7E-5 T 13-10-2018 Y11_16561 5941a54df7eac339c2da376aabc7d610 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.829 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Y11_16561 5941a54df7eac339c2da376aabc7d610 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 7.5E-70 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Y11_00461 e348d85a149c3dd9e1770d061277a06d 313 Pfam PF01218 Coproporphyrinogen III oxidase 9 307 9.1E-131 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Y11_00461 e348d85a149c3dd9e1770d061277a06d 313 SUPERFAMILY SSF102886 6 307 1.07E-136 T 13-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Y11_00461 e348d85a149c3dd9e1770d061277a06d 313 PIRSF PIRSF000166 3 308 1.5E-126 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Y11_00461 e348d85a149c3dd9e1770d061277a06d 313 Gene3D G3DSA:3.40.1500.10 2 307 1.7E-133 T 13-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Y11_00461 e348d85a149c3dd9e1770d061277a06d 313 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 282 57.246 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Y11_00461 e348d85a149c3dd9e1770d061277a06d 313 PRINTS PR00073 Coprogen oxidase signature 239 266 7.7E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Y11_00461 e348d85a149c3dd9e1770d061277a06d 313 PRINTS PR00073 Coprogen oxidase signature 267 293 7.7E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Y11_00461 e348d85a149c3dd9e1770d061277a06d 313 PRINTS PR00073 Coprogen oxidase signature 48 69 7.7E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Y11_00461 e348d85a149c3dd9e1770d061277a06d 313 PRINTS PR00073 Coprogen oxidase signature 90 114 7.7E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Y11_00461 e348d85a149c3dd9e1770d061277a06d 313 PRINTS PR00073 Coprogen oxidase signature 31 47 7.7E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Y11_00461 e348d85a149c3dd9e1770d061277a06d 313 PRINTS PR00073 Coprogen oxidase signature 162 191 7.7E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Y11_00461 e348d85a149c3dd9e1770d061277a06d 313 PRINTS PR00073 Coprogen oxidase signature 125 147 7.7E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Y11_00461 e348d85a149c3dd9e1770d061277a06d 313 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 13-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Y11_39581 2726a962de99e714a6aa424cdd81e093 247 Pfam PF03749 Sugar fermentation stimulation protein 20 232 1.8E-76 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein Y11_39581 2726a962de99e714a6aa424cdd81e093 247 Gene3D G3DSA:3.40.1350.60 88 241 4.0E-55 T 13-10-2018 Y11_39581 2726a962de99e714a6aa424cdd81e093 247 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 12 236 1.6E-82 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein Y11_39581 2726a962de99e714a6aa424cdd81e093 247 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 8 241 55.559 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein Y11_39581 2726a962de99e714a6aa424cdd81e093 247 Gene3D G3DSA:2.40.50.580 8 87 5.2E-29 T 13-10-2018 Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 SUPERFAMILY SSF52540 168 426 1.01E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 Gene3D G3DSA:3.40.50.300 157 349 1.2E-63 T 13-10-2018 Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 SUPERFAMILY SSF52540 436 747 1.89E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 732 0.0 T 13-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 SMART SM00382 205 351 1.2E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 SMART SM00382 486 653 2.0E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 SMART SM01086 652 743 1.8E-34 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 Gene3D G3DSA:1.10.1780.10 1 143 6.3E-45 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 Gene3D G3DSA:3.40.50.300 438 651 1.2E-79 T 13-10-2018 Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 1.2E-36 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 1.2E-36 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 1.2E-36 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 1.2E-36 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 Gene3D G3DSA:1.10.8.60 351 437 1.8E-35 T 13-10-2018 Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 732 5.0E-24 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.1E-14 T 13-10-2018 IPR004176 Clp, N-terminal Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 Gene3D G3DSA:1.10.8.60 652 757 2.0E-35 T 13-10-2018 Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 646 1.1E-48 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 SUPERFAMILY SSF81923 1 141 2.49E-58 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Y11_03931 01cb8587eedff643cc8f916d7ab33630 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 341 1.1E-12 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Y11_24751 a76d5e208f82a55f4a48d5759e4e4ee8 297 SMART SM00342 208 291 7.7E-27 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_24751 a76d5e208f82a55f4a48d5759e4e4ee8 297 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 179 4.8E-43 T 13-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal Y11_24751 a76d5e208f82a55f4a48d5759e4e4ee8 297 Gene3D G3DSA:1.10.10.60 187 295 8.1E-28 T 13-10-2018 Y11_24751 a76d5e208f82a55f4a48d5759e4e4ee8 297 SUPERFAMILY SSF46689 244 291 1.48E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_24751 a76d5e208f82a55f4a48d5759e4e4ee8 297 SUPERFAMILY SSF46689 191 242 4.12E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_24751 a76d5e208f82a55f4a48d5759e4e4ee8 297 Pfam PF12833 Helix-turn-helix domain 214 289 1.7E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_24351 2535556e4e9bfe4e8f80d4b70c1d3852 234 Gene3D G3DSA:2.30.30.760 172 233 1.2E-11 T 13-10-2018 Y11_24351 2535556e4e9bfe4e8f80d4b70c1d3852 234 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 93 228 1.4E-40 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Y11_24351 2535556e4e9bfe4e8f80d4b70c1d3852 234 Gene3D G3DSA:3.90.1210.10 106 170 2.7E-6 T 13-10-2018 Y11_24351 2535556e4e9bfe4e8f80d4b70c1d3852 234 SMART SM00858 105 167 4.2E-10 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Y11_24351 2535556e4e9bfe4e8f80d4b70c1d3852 234 Pfam PF13144 Chaperone for flagella basal body P-ring formation 26 228 6.4E-53 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Y11_35041 89e74889820306ad0b8b184f70fe0050 261 Pfam PF00293 NUDIX domain 131 234 1.4E-15 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Y11_35041 89e74889820306ad0b8b184f70fe0050 261 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 4.6E-8 T 13-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 Y11_35041 89e74889820306ad0b8b184f70fe0050 261 Gene3D G3DSA:3.90.79.10 126 256 1.1E-38 T 13-10-2018 Y11_35041 89e74889820306ad0b8b184f70fe0050 261 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 44.182 T 13-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 Y11_35041 89e74889820306ad0b8b184f70fe0050 261 SUPERFAMILY SSF55811 79 241 4.9E-39 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Y11_35041 89e74889820306ad0b8b184f70fe0050 261 Gene3D G3DSA:3.90.79.20 2 125 4.4E-47 T 13-10-2018 Y11_35041 89e74889820306ad0b8b184f70fe0050 261 SUPERFAMILY SSF55811 2 96 4.46E-31 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Y11_35041 89e74889820306ad0b8b184f70fe0050 261 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Y11_39561 caf17eae5a5619242cc1d782a764deb2 309 SUPERFAMILY SSF52374 12 290 3.85E-85 T 13-10-2018 Y11_39561 caf17eae5a5619242cc1d782a764deb2 309 Gene3D G3DSA:3.40.50.620 87 224 8.7E-110 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_39561 caf17eae5a5619242cc1d782a764deb2 309 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 12 296 40.782 T 13-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 Y11_39561 caf17eae5a5619242cc1d782a764deb2 309 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 200 2.3E-14 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Y11_39561 caf17eae5a5619242cc1d782a764deb2 309 PRINTS PR00987 Glutamyl-tRNA synthetase signature 29 40 2.3E-14 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Y11_39561 caf17eae5a5619242cc1d782a764deb2 309 PRINTS PR00987 Glutamyl-tRNA synthetase signature 176 186 2.3E-14 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Y11_39561 caf17eae5a5619242cc1d782a764deb2 309 PRINTS PR00987 Glutamyl-tRNA synthetase signature 44 57 2.3E-14 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Y11_39561 caf17eae5a5619242cc1d782a764deb2 309 PRINTS PR00987 Glutamyl-tRNA synthetase signature 15 27 2.3E-14 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Y11_39561 caf17eae5a5619242cc1d782a764deb2 309 Gene3D G3DSA:3.40.50.620 12 290 8.7E-110 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_39561 caf17eae5a5619242cc1d782a764deb2 309 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 12 268 7.7E-111 T 13-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 Y11_39561 caf17eae5a5619242cc1d782a764deb2 309 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 15 239 2.8E-43 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Y11_28001 5c6929c1e8b63672f2daad4f1cc40360 561 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 1 522 5.1E-214 T 13-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 Y11_28001 5c6929c1e8b63672f2daad4f1cc40360 561 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_28001 5c6929c1e8b63672f2daad4f1cc40360 561 Gene3D G3DSA:1.20.1560.10 1 281 1.6E-31 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_28001 5c6929c1e8b63672f2daad4f1cc40360 561 SUPERFAMILY SSF90123 2 282 1.96E-38 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_28001 5c6929c1e8b63672f2daad4f1cc40360 561 Pfam PF00664 ABC transporter transmembrane region 6 247 6.8E-9 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Y11_28001 5c6929c1e8b63672f2daad4f1cc40360 561 Gene3D G3DSA:3.40.50.300 289 527 1.2E-64 T 13-10-2018 Y11_28001 5c6929c1e8b63672f2daad4f1cc40360 561 Pfam PF00005 ABC transporter 315 460 8.6E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_28001 5c6929c1e8b63672f2daad4f1cc40360 561 SUPERFAMILY SSF52540 290 520 4.13E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_28001 5c6929c1e8b63672f2daad4f1cc40360 561 SMART SM00382 322 508 9.5E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_34451 6b6eddbb3ba1e5b138c2133bd4299a61 121 Gene3D G3DSA:3.40.190.10 4 65 6.5E-41 T 13-10-2018 Y11_34451 6b6eddbb3ba1e5b138c2133bd4299a61 121 Gene3D G3DSA:3.40.190.10 66 105 6.5E-41 T 13-10-2018 Y11_34451 6b6eddbb3ba1e5b138c2133bd4299a61 121 SUPERFAMILY SSF53850 4 106 6.29E-20 T 13-10-2018 Y11_34451 6b6eddbb3ba1e5b138c2133bd4299a61 121 Pfam PF13416 Bacterial extracellular solute-binding protein 5 49 9.1E-7 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein Y11_40211 1d1e66f9706f119acd0f60c5b6bd555f 131 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 5 121 1.2E-9 T 13-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 Y11_40211 1d1e66f9706f119acd0f60c5b6bd555f 131 Pfam PF13474 SnoaL-like domain 6 114 9.0E-9 T 13-10-2018 IPR037401 SnoaL-like domain Y11_40211 1d1e66f9706f119acd0f60c5b6bd555f 131 SUPERFAMILY SSF54427 6 128 8.79E-27 T 13-10-2018 IPR032710 NTF2-like domain superfamily Y11_40211 1d1e66f9706f119acd0f60c5b6bd555f 131 Gene3D G3DSA:3.10.450.50 3 130 2.4E-36 T 13-10-2018 Y11_09051 05f0b76b933785fa8f0b27a9f3b38ea7 269 Gene3D G3DSA:1.10.10.10 146 266 9.6E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_09051 05f0b76b933785fa8f0b27a9f3b38ea7 269 SMART SM00862 183 259 1.4E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_09051 05f0b76b933785fa8f0b27a9f3b38ea7 269 SUPERFAMILY SSF52172 25 154 8.82E-32 T 13-10-2018 IPR011006 CheY-like superfamily Y11_09051 05f0b76b933785fa8f0b27a9f3b38ea7 269 SMART SM00448 29 139 6.6E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_09051 05f0b76b933785fa8f0b27a9f3b38ea7 269 Pfam PF00072 Response regulator receiver domain 31 139 5.0E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_09051 05f0b76b933785fa8f0b27a9f3b38ea7 269 SUPERFAMILY SSF46894 165 260 2.78E-24 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_09051 05f0b76b933785fa8f0b27a9f3b38ea7 269 Pfam PF00486 Transcriptional regulatory protein, C terminal 184 259 2.8E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_09051 05f0b76b933785fa8f0b27a9f3b38ea7 269 Gene3D G3DSA:3.40.50.2300 21 145 5.2E-28 T 13-10-2018 Y11_12161 16addaa31d8a07bccf8ca08f6ff11611 406 Gene3D G3DSA:3.20.20.140 67 365 6.1E-162 T 13-10-2018 Y11_12161 16addaa31d8a07bccf8ca08f6ff11611 406 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 405 42.268 T 13-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Y11_12161 16addaa31d8a07bccf8ca08f6ff11611 406 Gene3D G3DSA:2.30.40.10 15 402 6.1E-162 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_12161 16addaa31d8a07bccf8ca08f6ff11611 406 SUPERFAMILY SSF51556 66 366 3.61E-86 T 13-10-2018 IPR032466 Metal-dependent hydrolase Y11_12161 16addaa31d8a07bccf8ca08f6ff11611 406 TIGRFAM TIGR01224 hutI: imidazolonepropionase 28 403 1.9E-162 T 13-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Y11_12161 16addaa31d8a07bccf8ca08f6ff11611 406 SUPERFAMILY SSF51338 6 403 4.97E-27 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_12161 16addaa31d8a07bccf8ca08f6ff11611 406 Pfam PF01979 Amidohydrolase family 64 399 9.8E-16 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Y11_14771 f90e60c633e249bf1a18f3b35d450f5d 89 Pfam PF10781 Dextransucrase DSRB 27 86 2.3E-37 T 13-10-2018 IPR019717 Dextransucrase DSRB Y11_14771 f90e60c633e249bf1a18f3b35d450f5d 89 Hamap MF_01549 Protein DsrB [dsrB]. 27 88 27.223 T 13-10-2018 IPR019717 Dextransucrase DSRB Y11_27671 e28b5985cf0526a32e607e21593709d0 168 Pfam PF04345 Chorismate lyase 9 167 1.6E-32 T 13-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 Y11_27671 e28b5985cf0526a32e607e21593709d0 168 SUPERFAMILY SSF64288 8 166 3.4E-51 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Y11_27671 e28b5985cf0526a32e607e21593709d0 168 Gene3D G3DSA:3.40.1410.10 5 166 9.2E-53 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Y11_27671 e28b5985cf0526a32e607e21593709d0 168 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 166 26.257 T 13-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 Y11_32411 b736ecfa172d4ad24d7e58f8a7906382 268 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 20 250 4.9E-79 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 Y11_32411 b736ecfa172d4ad24d7e58f8a7906382 268 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site Y11_32411 b736ecfa172d4ad24d7e58f8a7906382 268 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site Y11_32411 b736ecfa172d4ad24d7e58f8a7906382 268 Gene3D G3DSA:1.20.1080.10 1 258 3.5E-92 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Y11_32411 b736ecfa172d4ad24d7e58f8a7906382 268 Pfam PF01226 Formate/nitrite transporter 18 247 1.5E-56 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 Y11_33511 3a17bcdff021817df4fdb46c4350bbe8 904 Pfam PF03515 Colicin-like bacteriocin tRNase domain 29 310 4.3E-32 T 13-10-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 Y11_33511 3a17bcdff021817df4fdb46c4350bbe8 904 Gene3D G3DSA:3.90.540.10 771 904 5.6E-56 T 13-10-2018 IPR037146 Colicin/pyocin, DNase domain superfamily GO:0004519 Y11_33511 3a17bcdff021817df4fdb46c4350bbe8 904 SUPERFAMILY SSF69369 604 798 2.62E-32 T 13-10-2018 IPR036302 Pyosin/cloacin translocation domain superfamily GO:0009405 Y11_33511 3a17bcdff021817df4fdb46c4350bbe8 904 SUPERFAMILY SSF69369 123 305 7.98E-18 T 13-10-2018 IPR036302 Pyosin/cloacin translocation domain superfamily GO:0009405 Y11_33511 3a17bcdff021817df4fdb46c4350bbe8 904 SUPERFAMILY SSF54060 771 900 3.53E-51 T 13-10-2018 Y11_33511 3a17bcdff021817df4fdb46c4350bbe8 904 Pfam PF06958 S-type Pyocin 638 769 1.0E-33 T 13-10-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 Y11_33511 3a17bcdff021817df4fdb46c4350bbe8 904 PRINTS PR01295 Cloacin signature 162 179 9.3E-9 T 13-10-2018 IPR024575 Cloacin colicin family GO:0005727|GO:0009405 Y11_33511 3a17bcdff021817df4fdb46c4350bbe8 904 PRINTS PR01295 Cloacin signature 131 150 9.3E-9 T 13-10-2018 IPR024575 Cloacin colicin family GO:0005727|GO:0009405 Y11_33511 3a17bcdff021817df4fdb46c4350bbe8 904 PRINTS PR01295 Cloacin signature 280 302 9.3E-9 T 13-10-2018 IPR024575 Cloacin colicin family GO:0005727|GO:0009405 Y11_33511 3a17bcdff021817df4fdb46c4350bbe8 904 PRINTS PR01295 Cloacin signature 87 108 9.3E-9 T 13-10-2018 IPR024575 Cloacin colicin family GO:0005727|GO:0009405 Y11_p1081 e8aed927be43a3ffdae0ac939297f778 100 Pfam PF10723 Replication regulatory protein RepB 17 96 7.2E-44 T 13-10-2018 IPR019661 Replication regulatory protein RepA2 GO:0006276 Y11_11311 1a26a27818ab15b83e08137c4f689873 292 PIRSF PIRSF016020 8 292 2.7E-53 T 13-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 Y11_11311 1a26a27818ab15b83e08137c4f689873 292 SUPERFAMILY SSF74650 8 273 2.01E-70 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Y11_11311 1a26a27818ab15b83e08137c4f689873 292 Gene3D G3DSA:2.70.98.10 1 289 8.6E-92 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Y11_11311 1a26a27818ab15b83e08137c4f689873 292 Pfam PF01263 Aldose 1-epimerase 29 272 7.9E-44 T 13-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 Y11_14401 72405e06aec77325af66618b0acc5b7b 251 SUPERFAMILY SSF117143 77 209 8.89E-18 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Y11_14401 72405e06aec77325af66618b0acc5b7b 251 Pfam PF00460 Flagella basal body rod protein 5 35 5.1E-8 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Y11_14401 72405e06aec77325af66618b0acc5b7b 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 6.5E-34 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Y11_14401 72405e06aec77325af66618b0acc5b7b 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 247 3.3E-20 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Y11_p0781 e6647214f8f360dfe01db5280c2b6785 439 SUPERFAMILY SSF52540 95 364 1.36E-95 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_p0781 e6647214f8f360dfe01db5280c2b6785 439 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 21 438 1.4E-198 T 13-10-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_p0781 e6647214f8f360dfe01db5280c2b6785 439 Gene3D G3DSA:3.40.50.12240 18 439 1.6E-151 T 13-10-2018 Y11_p0781 e6647214f8f360dfe01db5280c2b6785 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_p0781 e6647214f8f360dfe01db5280c2b6785 439 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 5.9E-12 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_p0781 e6647214f8f360dfe01db5280c2b6785 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 358 9.2E-78 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_p0781 e6647214f8f360dfe01db5280c2b6785 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 19 438 6.1E-172 T 13-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_p0781 e6647214f8f360dfe01db5280c2b6785 439 SMART SM00382 161 342 4.6E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_16341 bd823ef47522d2a745c452a78770469a 412 TIGRFAM TIGR00016 ackA: acetate kinase 4 399 5.2E-150 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_16341 bd823ef47522d2a745c452a78770469a 412 PRINTS PR00471 Acetate kinase family signature 307 320 1.4E-41 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_16341 bd823ef47522d2a745c452a78770469a 412 PRINTS PR00471 Acetate kinase family signature 180 193 1.4E-41 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_16341 bd823ef47522d2a745c452a78770469a 412 PRINTS PR00471 Acetate kinase family signature 329 345 1.4E-41 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_16341 bd823ef47522d2a745c452a78770469a 412 PRINTS PR00471 Acetate kinase family signature 210 231 1.4E-41 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_16341 bd823ef47522d2a745c452a78770469a 412 PRINTS PR00471 Acetate kinase family signature 381 393 1.4E-41 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_16341 bd823ef47522d2a745c452a78770469a 412 PRINTS PR00471 Acetate kinase family signature 5 16 1.4E-41 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_16341 bd823ef47522d2a745c452a78770469a 412 Gene3D G3DSA:3.30.420.40 203 405 2.8E-77 T 13-10-2018 Y11_16341 bd823ef47522d2a745c452a78770469a 412 Hamap MF_01882 Probable propionate kinase [pduW]. 1 399 78.092 T 13-10-2018 IPR024896 Propionate kinase PduW GO:0008980|GO:0019543|GO:0051144 KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Y11_16341 bd823ef47522d2a745c452a78770469a 412 SUPERFAMILY SSF53067 4 202 2.2E-61 T 13-10-2018 Y11_16341 bd823ef47522d2a745c452a78770469a 412 SUPERFAMILY SSF53067 165 399 4.09E-85 T 13-10-2018 Y11_16341 bd823ef47522d2a745c452a78770469a 412 Gene3D G3DSA:3.30.420.40 3 202 9.8E-63 T 13-10-2018 Y11_16341 bd823ef47522d2a745c452a78770469a 412 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_16341 bd823ef47522d2a745c452a78770469a 412 PIRSF PIRSF000722 1 403 8.1E-144 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_16341 bd823ef47522d2a745c452a78770469a 412 Pfam PF00871 Acetokinase family 4 394 5.7E-143 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_16341 bd823ef47522d2a745c452a78770469a 412 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 210 227 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_16341 bd823ef47522d2a745c452a78770469a 412 Hamap MF_00020 Acetate kinase [ackA]. 1 404 170.808 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_40141 c774446d2c4726165da495e40c5c5844 120 Pfam PF01381 Helix-turn-helix 65 114 3.4E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_40141 c774446d2c4726165da495e40c5c5844 120 SMART SM00530 63 118 2.7E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_40141 c774446d2c4726165da495e40c5c5844 120 Gene3D G3DSA:1.10.260.40 64 119 9.7E-11 T 13-10-2018 Y11_40141 c774446d2c4726165da495e40c5c5844 120 SUPERFAMILY SSF47413 63 116 1.27E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_41761 459494443dc1dab2444004ad2c1f1050 322 Gene3D G3DSA:1.10.3720.10 87 316 2.0E-16 T 13-10-2018 IPR035906 MetI-like superfamily Y11_41761 459494443dc1dab2444004ad2c1f1050 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 317 7.9E-38 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_41761 459494443dc1dab2444004ad2c1f1050 322 SUPERFAMILY SSF161098 92 302 1.34E-16 T 13-10-2018 IPR035906 MetI-like superfamily Y11_13711 8552020f491e58d4310ebf49da9e232e 228 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 3.4E-10 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_13711 8552020f491e58d4310ebf49da9e232e 228 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 3.4E-10 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_13711 8552020f491e58d4310ebf49da9e232e 228 PRINTS PR00111 Alpha/beta hydrolase fold signature 201 215 3.4E-10 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_13711 8552020f491e58d4310ebf49da9e232e 228 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 3.4E-10 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_13711 8552020f491e58d4310ebf49da9e232e 228 SUPERFAMILY SSF53474 1 227 4.3E-52 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_13711 8552020f491e58d4310ebf49da9e232e 228 Gene3D G3DSA:3.40.50.1820 3 228 1.8E-61 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_13711 8552020f491e58d4310ebf49da9e232e 228 TIGRFAM TIGR03611 RutD: pyrimidine utilization protein D 1 227 7.4E-93 T 13-10-2018 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 Y11_13711 8552020f491e58d4310ebf49da9e232e 228 Pfam PF00561 alpha/beta hydrolase fold 15 115 4.4E-16 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_13711 8552020f491e58d4310ebf49da9e232e 228 Hamap MF_00832 Putative aminoacrylate hydrolase RutD [rutD]. 1 228 42.227 T 13-10-2018 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 Y11_07651 07e5123afdf165456ef99cc4946b1189 493 Gene3D G3DSA:3.40.1080.20 334 473 1.7E-36 T 13-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily Y11_07651 07e5123afdf165456ef99cc4946b1189 493 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 8 490 2.7E-216 T 13-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 Y11_07651 07e5123afdf165456ef99cc4946b1189 493 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 2 213 1.3E-57 T 13-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 Y11_07651 07e5123afdf165456ef99cc4946b1189 493 Gene3D G3DSA:3.40.1080.10 4 171 8.4E-14 T 13-10-2018 Y11_07651 07e5123afdf165456ef99cc4946b1189 493 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 317 461 6.8E-42 T 13-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain Y11_07651 07e5123afdf165456ef99cc4946b1189 493 SUPERFAMILY SSF100950 227 490 6.61E-68 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_07651 07e5123afdf165456ef99cc4946b1189 493 SUPERFAMILY SSF100950 8 219 3.31E-56 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_09501 52644832edc4b6578b30ac41e402aafb 86 SUPERFAMILY SSF161098 2 60 6.54E-6 T 13-10-2018 IPR035906 MetI-like superfamily Y11_09501 52644832edc4b6578b30ac41e402aafb 86 Gene3D G3DSA:1.10.3720.10 1 76 3.6E-10 T 13-10-2018 IPR035906 MetI-like superfamily Y11_31301 10cc0f3c94eaaaa2c4f2dcdc5a980213 482 SUPERFAMILY SSF63411 15 226 1.66E-26 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Y11_31301 10cc0f3c94eaaaa2c4f2dcdc5a980213 482 Pfam PF00675 Insulinase (Peptidase family M16) 37 169 7.1E-11 T 13-10-2018 IPR011765 Peptidase M16, N-terminal Y11_31301 10cc0f3c94eaaaa2c4f2dcdc5a980213 482 SUPERFAMILY SSF63411 328 442 1.6E-5 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Y11_31301 10cc0f3c94eaaaa2c4f2dcdc5a980213 482 Gene3D G3DSA:3.30.830.10 1 242 8.3E-50 T 13-10-2018 Y11_31301 10cc0f3c94eaaaa2c4f2dcdc5a980213 482 Gene3D G3DSA:3.30.830.10 243 458 6.4E-103 T 13-10-2018 Y11_31301 10cc0f3c94eaaaa2c4f2dcdc5a980213 482 Pfam PF05193 Peptidase M16 inactive domain 188 362 2.6E-15 T 13-10-2018 IPR007863 Peptidase M16, C-terminal Y11_22501 b84fd377a9c106379f9f4fbd0292b548 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 7 238 5.9E-54 T 13-10-2018 Y11_22501 b84fd377a9c106379f9f4fbd0292b548 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Y11_22501 b84fd377a9c106379f9f4fbd0292b548 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 8.4E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_22501 b84fd377a9c106379f9f4fbd0292b548 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 8.4E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_22501 b84fd377a9c106379f9f4fbd0292b548 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 8.4E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_22501 b84fd377a9c106379f9f4fbd0292b548 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 8.4E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_22501 b84fd377a9c106379f9f4fbd0292b548 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 8.4E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_22501 b84fd377a9c106379f9f4fbd0292b548 239 Gene3D G3DSA:3.40.50.720 1 238 1.3E-69 T 13-10-2018 Y11_22501 b84fd377a9c106379f9f4fbd0292b548 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1 182 1.2E-5 T 13-10-2018 Y11_22501 b84fd377a9c106379f9f4fbd0292b548 239 SUPERFAMILY SSF51735 1 239 1.17E-69 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_22501 b84fd377a9c106379f9f4fbd0292b548 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 4.5E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_22501 b84fd377a9c106379f9f4fbd0292b548 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 4.5E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_22501 b84fd377a9c106379f9f4fbd0292b548 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 4.5E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_38561 b69a0dcc241395a11c36636616d75605 154 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 154 35.072 T 13-10-2018 IPR020914 Uncharacterised protein family UPF0442 Y11_38561 b69a0dcc241395a11c36636616d75605 154 Pfam PF12821 Threonine/Serine exporter, ThrE 10 144 2.5E-35 T 13-10-2018 IPR024528 Threonine/Serine exporter, ThrE Y11_32481 2940e1dcf08386a64e5e8e5259b3d169 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 1.1E-44 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Y11_32481 2940e1dcf08386a64e5e8e5259b3d169 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 1.1E-44 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Y11_32481 2940e1dcf08386a64e5e8e5259b3d169 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 1.1E-44 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Y11_32481 2940e1dcf08386a64e5e8e5259b3d169 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 1.1E-44 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Y11_32481 2940e1dcf08386a64e5e8e5259b3d169 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 1.1E-44 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Y11_32481 2940e1dcf08386a64e5e8e5259b3d169 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 1.1E-44 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Y11_32481 2940e1dcf08386a64e5e8e5259b3d169 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 1.1E-44 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Y11_32481 2940e1dcf08386a64e5e8e5259b3d169 437 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 410 1.2E-49 T 13-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 Y11_32481 2940e1dcf08386a64e5e8e5259b3d169 437 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 171 - T 13-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 Y11_32481 2940e1dcf08386a64e5e8e5259b3d169 437 SUPERFAMILY SSF56327 172 435 1.21E-90 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Y11_32481 2940e1dcf08386a64e5e8e5259b3d169 437 Pfam PF02056 Family 4 glycosyl hydrolase 5 186 1.6E-54 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Y11_32481 2940e1dcf08386a64e5e8e5259b3d169 437 SUPERFAMILY SSF51735 2 169 1.04E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_32481 2940e1dcf08386a64e5e8e5259b3d169 437 Gene3D G3DSA:3.40.50.720 1 169 3.0E-60 T 13-10-2018 Y11_32481 2940e1dcf08386a64e5e8e5259b3d169 437 Gene3D G3DSA:3.90.110.10 170 437 1.3E-98 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Y11_28261 416a7c64bc026e455f256168954a7a0e 282 SUPERFAMILY SSF81338 11 259 1.2E-80 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Y11_28261 416a7c64bc026e455f256168954a7a0e 282 Pfam PF00230 Major intrinsic protein 6 253 3.1E-71 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_28261 416a7c64bc026e455f256168954a7a0e 282 Gene3D G3DSA:1.20.1080.10 3 261 6.9E-109 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Y11_28261 416a7c64bc026e455f256168954a7a0e 282 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 1.5E-72 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_28261 416a7c64bc026e455f256168954a7a0e 282 PRINTS PR00783 Major intrinsic protein family signature 87 106 6.5E-52 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_28261 416a7c64bc026e455f256168954a7a0e 282 PRINTS PR00783 Major intrinsic protein family signature 11 30 6.5E-52 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_28261 416a7c64bc026e455f256168954a7a0e 282 PRINTS PR00783 Major intrinsic protein family signature 236 256 6.5E-52 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_28261 416a7c64bc026e455f256168954a7a0e 282 PRINTS PR00783 Major intrinsic protein family signature 50 74 6.5E-52 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_28261 416a7c64bc026e455f256168954a7a0e 282 PRINTS PR00783 Major intrinsic protein family signature 153 171 6.5E-52 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_28261 416a7c64bc026e455f256168954a7a0e 282 PRINTS PR00783 Major intrinsic protein family signature 186 208 6.5E-52 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Y11_28261 416a7c64bc026e455f256168954a7a0e 282 ProSitePatterns PS00221 MIP family signature. 68 76 - T 13-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 Y11_21411 eb55f535b6e087f56d4c6e1d81261136 407 Gene3D G3DSA:3.40.50.80 275 393 2.6E-34 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Y11_21411 eb55f535b6e087f56d4c6e1d81261136 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 1.4E-8 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Y11_21411 eb55f535b6e087f56d4c6e1d81261136 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 41 114 1.8E-10 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Y11_21411 eb55f535b6e087f56d4c6e1d81261136 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 5.1E-19 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Y11_21411 eb55f535b6e087f56d4c6e1d81261136 407 Gene3D G3DSA:2.40.30.10 126 264 6.8E-50 T 13-10-2018 Y11_21411 eb55f535b6e087f56d4c6e1d81261136 407 PIRSF PIRSF000044 1 407 2.0E-219 T 13-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 Y11_21411 eb55f535b6e087f56d4c6e1d81261136 407 SUPERFAMILY SSF63380 105 272 3.57E-35 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Y11_21411 eb55f535b6e087f56d4c6e1d81261136 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 9.9E-5 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Y11_21411 eb55f535b6e087f56d4c6e1d81261136 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 9.9E-5 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Y11_21411 eb55f535b6e087f56d4c6e1d81261136 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 9.9E-5 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Y11_21411 eb55f535b6e087f56d4c6e1d81261136 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 314 325 9.9E-5 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Y11_21411 eb55f535b6e087f56d4c6e1d81261136 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.987 T 13-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 Y11_21411 eb55f535b6e087f56d4c6e1d81261136 407 Gene3D G3DSA:3.10.20.30 34 125 3.5E-30 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Y11_21411 eb55f535b6e087f56d4c6e1d81261136 407 SUPERFAMILY SSF54292 35 124 1.31E-22 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Y11_21411 eb55f535b6e087f56d4c6e1d81261136 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 1.1E-235 T 13-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 Y11_21411 eb55f535b6e087f56d4c6e1d81261136 407 SUPERFAMILY SSF52343 255 402 1.96E-38 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Y11_23731 ba22abe7c237cbdd9578032682256cc1 317 SUPERFAMILY SSF53807 32 296 1.88E-66 T 13-10-2018 Y11_23731 ba22abe7c237cbdd9578032682256cc1 317 Gene3D G3DSA:3.40.50.1980 44 304 6.2E-93 T 13-10-2018 Y11_23731 ba22abe7c237cbdd9578032682256cc1 317 Pfam PF01497 Periplasmic binding protein 52 287 3.0E-33 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain Y11_23731 ba22abe7c237cbdd9578032682256cc1 317 Gene3D G3DSA:3.40.50.12260 182 287 6.2E-93 T 13-10-2018 Y11_00841 bd12ee56a6489f4cadbef9ea8078b9c2 359 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 2 47 2.0E-8 T 13-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 Y11_00841 bd12ee56a6489f4cadbef9ea8078b9c2 359 Pfam PF07670 Nucleoside recognition 57 155 1.3E-7 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Y11_00841 bd12ee56a6489f4cadbef9ea8078b9c2 359 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 158 357 1.4E-59 T 13-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 Y11_05571 fd9e24f62c5e30e11321a969417a40da 278 SUPERFAMILY SSF52467 41 267 3.27E-74 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Y11_05571 fd9e24f62c5e30e11321a969417a40da 278 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 39 269 59.131 T 13-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 Y11_05571 fd9e24f62c5e30e11321a969417a40da 278 Gene3D G3DSA:3.30.1600.10 55 191 1.7E-81 T 13-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily Y11_05571 fd9e24f62c5e30e11321a969417a40da 278 Gene3D G3DSA:3.40.50.1220 41 261 1.7E-81 T 13-10-2018 Y11_05571 fd9e24f62c5e30e11321a969417a40da 278 Pfam PF02146 Sir2 family 46 219 5.4E-51 T 13-10-2018 IPR003000 Sirtuin family GO:0070403 Y11_36021 736933f11e8d2758e2c2338402c542ff 293 Pfam PF02666 Phosphatidylserine decarboxylase 63 284 4.3E-59 T 13-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Y11_36021 736933f11e8d2758e2c2338402c542ff 293 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 48.847 T 13-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Y11_36021 736933f11e8d2758e2c2338402c542ff 293 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 285 1.7E-92 T 13-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Y11_15821 a609cf18b3099a40b88bc8ce9a7befcc 348 SUPERFAMILY SSF53448 11 158 1.11E-5 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_15821 a609cf18b3099a40b88bc8ce9a7befcc 348 Pfam PF11397 Glycosyltransferase (GlcNAc) 1 221 1.3E-51 T 13-10-2018 IPR021067 Glycosyltransferase, GlcNAc Y11_21881 4559ce6ba2a7e97f95362bfd9053b0c8 451 SUPERFAMILY SSF56024 252 393 1.13E-18 T 13-10-2018 Y11_21881 4559ce6ba2a7e97f95362bfd9053b0c8 451 Pfam PF13091 PLD-like domain 257 404 2.5E-21 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Y11_21881 4559ce6ba2a7e97f95362bfd9053b0c8 451 Gene3D G3DSA:3.30.870.10 24 232 4.5E-175 T 13-10-2018 Y11_21881 4559ce6ba2a7e97f95362bfd9053b0c8 451 Gene3D G3DSA:3.30.870.10 18 447 4.5E-175 T 13-10-2018 Y11_21881 4559ce6ba2a7e97f95362bfd9053b0c8 451 SUPERFAMILY SSF56024 10 210 1.76E-26 T 13-10-2018 Y11_21881 4559ce6ba2a7e97f95362bfd9053b0c8 451 PIRSF PIRSF000850 1 451 5.1E-256 T 13-10-2018 Y11_21881 4559ce6ba2a7e97f95362bfd9053b0c8 451 SMART SM00155 352 379 0.0025 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Y11_21881 4559ce6ba2a7e97f95362bfd9053b0c8 451 SMART SM00155 133 159 0.0072 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Y11_25861 0a8f53c41989916b4305b050af61fd94 434 SUPERFAMILY SSF103473 4 413 3.01E-78 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_25861 0a8f53c41989916b4305b050af61fd94 434 Pfam PF07690 Major Facilitator Superfamily 18 288 1.5E-46 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_25861 0a8f53c41989916b4305b050af61fd94 434 Gene3D G3DSA:1.20.1250.20 1 199 1.1E-46 T 13-10-2018 Y11_25861 0a8f53c41989916b4305b050af61fd94 434 Gene3D G3DSA:1.20.1250.20 216 418 4.1E-25 T 13-10-2018 Y11_p0061 d763388f62c3b58660a22cdf184bd63a 245 PIRSF PIRSF002859 1 245 1.1E-154 T 13-10-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 Y11_p0061 d763388f62c3b58660a22cdf184bd63a 245 Pfam PF05818 Enterobacterial TraT complement resistance protein 34 245 1.6E-80 T 13-10-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 Y11_42551 1e929a88e07fba04ea99e462ea391b5c 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Y11_42551 1e929a88e07fba04ea99e462ea391b5c 112 SMART SM00938 4 105 9.7E-69 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Y11_42551 1e929a88e07fba04ea99e462ea391b5c 112 PIRSF PIRSF039144 1 112 4.5E-58 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Y11_42551 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 83 103 1.2E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Y11_42551 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 2 17 1.2E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Y11_42551 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 23 41 1.2E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Y11_42551 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 52 75 1.2E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Y11_42551 1e929a88e07fba04ea99e462ea391b5c 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.4E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Y11_42551 1e929a88e07fba04ea99e462ea391b5c 112 Gene3D G3DSA:3.30.70.120 1 112 7.8E-49 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Y11_42551 1e929a88e07fba04ea99e462ea391b5c 112 SUPERFAMILY SSF54913 1 112 5.4E-47 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Y11_42551 1e929a88e07fba04ea99e462ea391b5c 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Y11_p0931 9ed35e62121db898796a46648d03ecd6 367 SMART SM00364 314 333 0.014 T 13-10-2018 Y11_p0931 9ed35e62121db898796a46648d03ecd6 367 SMART SM00364 274 293 0.0013 T 13-10-2018 Y11_p0931 9ed35e62121db898796a46648d03ecd6 367 SMART SM00364 90 109 2.0E-5 T 13-10-2018 Y11_p0931 9ed35e62121db898796a46648d03ecd6 367 SMART SM00364 294 313 0.0022 T 13-10-2018 Y11_p0931 9ed35e62121db898796a46648d03ecd6 367 SMART SM00364 234 253 0.03 T 13-10-2018 Y11_p0931 9ed35e62121db898796a46648d03ecd6 367 SMART SM00364 110 129 6.1E-4 T 13-10-2018 Y11_p0931 9ed35e62121db898796a46648d03ecd6 367 SMART SM00364 194 213 0.015 T 13-10-2018 Y11_p0931 9ed35e62121db898796a46648d03ecd6 367 SMART SM00364 254 273 0.0075 T 13-10-2018 Y11_p0931 9ed35e62121db898796a46648d03ecd6 367 SMART SM00364 214 233 1.5E-5 T 13-10-2018 Y11_p0931 9ed35e62121db898796a46648d03ecd6 367 SMART SM00364 152 171 0.0062 T 13-10-2018 Y11_p0931 9ed35e62121db898796a46648d03ecd6 367 SMART SM00364 130 149 1.1E-4 T 13-10-2018 Y11_p0931 9ed35e62121db898796a46648d03ecd6 367 SMART SM00364 172 191 1.9E-4 T 13-10-2018 Y11_p0931 9ed35e62121db898796a46648d03ecd6 367 SUPERFAMILY SSF52058 71 341 3.85E-52 T 13-10-2018 Y11_p0931 9ed35e62121db898796a46648d03ecd6 367 Gene3D G3DSA:3.80.10.10 34 344 7.0E-91 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily Y11_p0931 9ed35e62121db898796a46648d03ecd6 367 Pfam PF12468 Type III secretion system leucine rich repeat protein 8 63 1.5E-16 T 13-10-2018 IPR032674 LRR-containing bacterial E3 ligase, N-terminal MetaCyc: PWY-7511 Y11_37881 2c18b5ab209067b8bf30de49dc5f3afc 381 Pfam PF01497 Periplasmic binding protein 70 325 9.9E-23 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain Y11_37881 2c18b5ab209067b8bf30de49dc5f3afc 381 SUPERFAMILY SSF53807 30 349 3.92E-44 T 13-10-2018 Y11_37881 2c18b5ab209067b8bf30de49dc5f3afc 381 Gene3D G3DSA:3.40.50.1980 29 378 8.5E-95 T 13-10-2018 Y11_03131 354fccf97e1ac2819d2329fb0d974e9b 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 1.2E-42 T 13-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 Y11_03131 354fccf97e1ac2819d2329fb0d974e9b 490 Gene3D G3DSA:3.40.50.720 7 281 9.9E-106 T 13-10-2018 Y11_03131 354fccf97e1ac2819d2329fb0d974e9b 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 463 1.9E-94 T 13-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 Y11_03131 354fccf97e1ac2819d2329fb0d974e9b 490 SUPERFAMILY SSF51735 3 282 1.69E-94 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_03131 354fccf97e1ac2819d2329fb0d974e9b 490 SUPERFAMILY SSF48179 283 488 1.84E-65 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_03131 354fccf97e1ac2819d2329fb0d974e9b 490 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 7.5E-22 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Y11_03131 354fccf97e1ac2819d2329fb0d974e9b 490 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 7.5E-22 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Y11_03131 354fccf97e1ac2819d2329fb0d974e9b 490 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 7.5E-22 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Y11_03131 354fccf97e1ac2819d2329fb0d974e9b 490 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 7.5E-22 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Y11_03131 354fccf97e1ac2819d2329fb0d974e9b 490 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 13-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Y11_03131 354fccf97e1ac2819d2329fb0d974e9b 490 Gene3D G3DSA:1.10.1040.10 282 490 2.8E-78 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Y11_25841 18443f2359ebeedbe34c289d11c679bb 469 Gene3D G3DSA:3.20.20.140 7 465 1.6E-202 T 13-10-2018 Y11_25841 18443f2359ebeedbe34c289d11c679bb 469 SUPERFAMILY SSF51556 3 465 9.86E-181 T 13-10-2018 IPR032466 Metal-dependent hydrolase Y11_25841 18443f2359ebeedbe34c289d11c679bb 469 Pfam PF02614 Glucuronate isomerase 1 465 3.8E-229 T 13-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 Y11_25841 18443f2359ebeedbe34c289d11c679bb 469 Gene3D G3DSA:1.10.2020.10 46 137 1.6E-202 T 13-10-2018 Y11_25841 18443f2359ebeedbe34c289d11c679bb 469 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 49.462 T 13-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 Y11_41851 282cc54e6622825f49d52b9591858c63 226 Pfam PF02814 UreE urease accessory protein, N-terminal domain 15 73 2.3E-16 T 13-10-2018 IPR004029 UreE urease accessory, N-terminal Y11_41851 282cc54e6622825f49d52b9591858c63 226 PIRSF PIRSF036402 2 226 2.1E-38 T 13-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 Y11_41851 282cc54e6622825f49d52b9591858c63 226 Gene3D G3DSA:2.60.260.20 1 79 2.1E-12 T 13-10-2018 Y11_41851 282cc54e6622825f49d52b9591858c63 226 SUPERFAMILY SSF69287 3 79 1.44E-18 T 13-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily Y11_41851 282cc54e6622825f49d52b9591858c63 226 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 159 14.71 T 13-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 Y11_41851 282cc54e6622825f49d52b9591858c63 226 SMART SM00988 11 75 5.0E-16 T 13-10-2018 IPR004029 UreE urease accessory, N-terminal Y11_41851 282cc54e6622825f49d52b9591858c63 226 Pfam PF05194 UreE urease accessory protein, C-terminal domain 85 217 1.0E-8 T 13-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 Y11_22421 90f547ef7e39a3efc3b245be64713b57 416 SUPERFAMILY SSF50129 3 189 1.59E-27 T 13-10-2018 IPR011032 GroES-like superfamily Y11_22421 90f547ef7e39a3efc3b245be64713b57 416 Gene3D G3DSA:3.90.180.10 1 170 1.1E-20 T 13-10-2018 Y11_22421 90f547ef7e39a3efc3b245be64713b57 416 Gene3D G3DSA:3.40.50.720 171 300 9.8E-18 T 13-10-2018 Y11_22421 90f547ef7e39a3efc3b245be64713b57 416 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 98 4.3E-6 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Y11_22421 90f547ef7e39a3efc3b245be64713b57 416 SUPERFAMILY SSF51735 168 332 3.94E-19 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_22421 90f547ef7e39a3efc3b245be64713b57 416 Pfam PF00107 Zinc-binding dehydrogenase 187 327 1.7E-14 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Y11_20041 44c630b1aebfbcbc388ef0d63ef081af 201 Pfam PF02132 RecR protein 41 77 1.6E-14 T 13-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger Y11_20041 44c630b1aebfbcbc388ef0d63ef081af 201 Gene3D G3DSA:1.10.8.420 1 53 1.9E-18 T 13-10-2018 Y11_20041 44c630b1aebfbcbc388ef0d63ef081af 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 4.6E-80 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Y11_20041 44c630b1aebfbcbc388ef0d63ef081af 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 13-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 Y11_20041 44c630b1aebfbcbc388ef0d63ef081af 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.422 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Y11_20041 44c630b1aebfbcbc388ef0d63ef081af 201 Pfam PF13662 Toprim domain 82 172 7.6E-21 T 13-10-2018 IPR006171 TOPRIM domain Y11_20041 44c630b1aebfbcbc388ef0d63ef081af 201 SUPERFAMILY SSF111304 2 199 3.01E-70 T 13-10-2018 IPR023627 Recombination protein RecR Y11_20041 44c630b1aebfbcbc388ef0d63ef081af 201 Gene3D G3DSA:3.40.1360.10 77 199 4.7E-38 T 13-10-2018 Y11_20041 44c630b1aebfbcbc388ef0d63ef081af 201 SMART SM00493 81 166 2.6E-17 T 13-10-2018 IPR006171 TOPRIM domain Y11_42371 24a615dc7c6e850f9a179de71f41f708 303 Hamap MF_00367 GTPase Era [era]. 7 298 35.865 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_42371 24a615dc7c6e850f9a179de71f41f708 303 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 281 4.2E-118 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_42371 24a615dc7c6e850f9a179de71f41f708 303 Pfam PF01926 50S ribosome-binding GTPase 12 126 1.3E-22 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_42371 24a615dc7c6e850f9a179de71f41f708 303 Pfam PF07650 KH domain 210 286 2.3E-19 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_42371 24a615dc7c6e850f9a179de71f41f708 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 80 98 1.0E-5 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_42371 24a615dc7c6e850f9a179de71f41f708 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 12 32 1.0E-5 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_42371 24a615dc7c6e850f9a179de71f41f708 303 Gene3D G3DSA:3.40.50.300 3 185 1.2E-50 T 13-10-2018 Y11_42371 24a615dc7c6e850f9a179de71f41f708 303 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 171 4.5E-41 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Y11_42371 24a615dc7c6e850f9a179de71f41f708 303 Gene3D G3DSA:3.30.300.20 187 303 1.2E-43 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Y11_42371 24a615dc7c6e850f9a179de71f41f708 303 SUPERFAMILY SSF54814 183 298 1.44E-42 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Y11_42371 24a615dc7c6e850f9a179de71f41f708 303 SUPERFAMILY SSF52540 12 206 6.52E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_14121 f5b630ef23e92d1b65710815f2f2e917 200 Gene3D G3DSA:1.10.1670.40 7 195 9.6E-66 T 13-10-2018 Y11_14121 f5b630ef23e92d1b65710815f2f2e917 200 Gene3D G3DSA:1.10.340.30 35 146 9.6E-66 T 13-10-2018 Y11_14121 f5b630ef23e92d1b65710815f2f2e917 200 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 44 181 2.4E-13 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Y11_14121 f5b630ef23e92d1b65710815f2f2e917 200 SUPERFAMILY SSF48150 36 197 5.76E-36 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Y11_14121 f5b630ef23e92d1b65710815f2f2e917 200 SMART SM00478 49 198 8.9E-5 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Y11_01571 8cb9dd013d6bf42263ca101c8530d616 232 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 225 1.5E-56 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Y11_01571 8cb9dd013d6bf42263ca101c8530d616 232 Gene3D G3DSA:3.40.50.1860 105 216 2.4E-89 T 13-10-2018 Y11_01571 8cb9dd013d6bf42263ca101c8530d616 232 SUPERFAMILY SSF53681 2 117 8.83E-36 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Y11_01571 8cb9dd013d6bf42263ca101c8530d616 232 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 231 1.6E-71 T 13-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 Y11_01571 8cb9dd013d6bf42263ca101c8530d616 232 Gene3D G3DSA:3.40.50.1860 5 225 2.4E-89 T 13-10-2018 Y11_01571 8cb9dd013d6bf42263ca101c8530d616 232 SUPERFAMILY SSF53681 119 230 3.27E-32 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Y11_42091 8b21f5f4db33ec965bcba0f39ab2bf1a 427 Gene3D G3DSA:1.10.443.10 237 408 1.8E-13 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Y11_42091 8b21f5f4db33ec965bcba0f39ab2bf1a 427 Pfam PF13356 Arm DNA-binding domain 26 113 8.1E-16 T 13-10-2018 IPR025166 Integrase, DNA-binding domain Y11_42091 8b21f5f4db33ec965bcba0f39ab2bf1a 427 Gene3D G3DSA:1.10.150.130 119 234 4.1E-29 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Y11_42091 8b21f5f4db33ec965bcba0f39ab2bf1a 427 SUPERFAMILY SSF56349 127 410 1.0E-52 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Y11_42091 8b21f5f4db33ec965bcba0f39ab2bf1a 427 Gene3D G3DSA:3.30.160.390 24 116 2.3E-25 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Y11_42091 8b21f5f4db33ec965bcba0f39ab2bf1a 427 Pfam PF00589 Phage integrase family 237 400 4.0E-18 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Y11_09191 293827b9ef9f9a6f7c56178a71e8b4e4 476 ProSitePatterns PS00123 Alkaline phosphatase active site. 126 134 - T 13-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Y11_09191 293827b9ef9f9a6f7c56178a71e8b4e4 476 Gene3D G3DSA:3.40.720.10 30 476 1.3E-145 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Y11_09191 293827b9ef9f9a6f7c56178a71e8b4e4 476 SMART SM00098 70 476 4.1E-181 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Y11_09191 293827b9ef9f9a6f7c56178a71e8b4e4 476 Pfam PF00245 Alkaline phosphatase 70 435 1.5E-117 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Y11_09191 293827b9ef9f9a6f7c56178a71e8b4e4 476 PRINTS PR00113 Alkaline phosphatase signature 69 89 5.7E-48 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Y11_09191 293827b9ef9f9a6f7c56178a71e8b4e4 476 PRINTS PR00113 Alkaline phosphatase signature 163 183 5.7E-48 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Y11_09191 293827b9ef9f9a6f7c56178a71e8b4e4 476 PRINTS PR00113 Alkaline phosphatase signature 226 236 5.7E-48 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Y11_09191 293827b9ef9f9a6f7c56178a71e8b4e4 476 PRINTS PR00113 Alkaline phosphatase signature 325 354 5.7E-48 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Y11_09191 293827b9ef9f9a6f7c56178a71e8b4e4 476 PRINTS PR00113 Alkaline phosphatase signature 126 141 5.7E-48 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Y11_09191 293827b9ef9f9a6f7c56178a71e8b4e4 476 SUPERFAMILY SSF53649 44 475 9.29E-132 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Y11_38941 db6be6c76a28b7e5715cf4a5f6e2cd6a 69 Pfam PF06610 L-alanine exporter 2 65 3.2E-31 T 13-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 Y11_38941 db6be6c76a28b7e5715cf4a5f6e2cd6a 69 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 2 65 1.0E-27 T 13-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 Y11_26581 2338c98c52d95ce88eeccc622e0280b7 128 Gene3D G3DSA:3.30.1330.40 1 128 1.9E-47 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Y11_26581 2338c98c52d95ce88eeccc622e0280b7 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 13-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 Y11_26581 2338c98c52d95ce88eeccc622e0280b7 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 1.8E-52 T 13-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Y11_26581 2338c98c52d95ce88eeccc622e0280b7 128 Pfam PF01042 Endoribonuclease L-PSP 8 126 3.2E-43 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Y11_26581 2338c98c52d95ce88eeccc622e0280b7 128 SUPERFAMILY SSF55298 4 127 5.03E-43 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Y11_06811 365d91a68e9ae8f8d14e95b1c5fd5208 335 TIGRFAM TIGR03814 Gln_ase: glutaminase A 27 326 5.1E-101 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Y11_06811 365d91a68e9ae8f8d14e95b1c5fd5208 335 Hamap MF_00313 Glutaminase [glsA]. 24 326 40.986 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Y11_06811 365d91a68e9ae8f8d14e95b1c5fd5208 335 Gene3D G3DSA:3.40.710.10 21 328 2.7E-103 T 13-10-2018 Y11_06811 365d91a68e9ae8f8d14e95b1c5fd5208 335 SUPERFAMILY SSF56601 25 326 4.54E-101 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_06811 365d91a68e9ae8f8d14e95b1c5fd5208 335 Pfam PF04960 Glutaminase 42 326 2.9E-96 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Y11_17471 24946a9be1858c0a7661b9255bf6c5aa 203 ProSitePatterns PS00818 Dps protein family signature 1. 87 103 - T 13-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 Y11_17471 24946a9be1858c0a7661b9255bf6c5aa 203 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 87 103 3.0E-12 T 13-10-2018 IPR002177 DNA-binding protein Dps Y11_17471 24946a9be1858c0a7661b9255bf6c5aa 203 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 111 127 3.0E-12 T 13-10-2018 IPR002177 DNA-binding protein Dps Y11_17471 24946a9be1858c0a7661b9255bf6c5aa 203 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 180 198 3.0E-12 T 13-10-2018 IPR002177 DNA-binding protein Dps Y11_17471 24946a9be1858c0a7661b9255bf6c5aa 203 Gene3D G3DSA:1.20.1260.10 35 203 2.2E-50 T 13-10-2018 IPR012347 Ferritin-like Y11_17471 24946a9be1858c0a7661b9255bf6c5aa 203 Pfam PF00210 Ferritin-like domain 66 202 2.9E-20 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Y11_17471 24946a9be1858c0a7661b9255bf6c5aa 203 Hamap MF_01441 DNA protection during starvation protein [dps]. 37 203 44.841 T 13-10-2018 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 Y11_17471 24946a9be1858c0a7661b9255bf6c5aa 203 PIRSF PIRSF005900 45 203 3.1E-39 T 13-10-2018 IPR002177 DNA-binding protein Dps Y11_17471 24946a9be1858c0a7661b9255bf6c5aa 203 SUPERFAMILY SSF47240 47 203 5.91E-48 T 13-10-2018 IPR009078 Ferritin-like superfamily Y11_36221 f6b6ad7fe2856939fca61cda2198bcb7 435 SUPERFAMILY SSF56645 77 296 1.55E-30 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Y11_36221 f6b6ad7fe2856939fca61cda2198bcb7 435 Gene3D G3DSA:2.40.110.20 130 289 5.8E-55 T 13-10-2018 Y11_36221 f6b6ad7fe2856939fca61cda2198bcb7 435 Gene3D G3DSA:1.20.140.10 290 435 2.2E-33 T 13-10-2018 Y11_36221 f6b6ad7fe2856939fca61cda2198bcb7 435 SUPERFAMILY SSF47203 287 435 1.77E-34 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Y11_36221 f6b6ad7fe2856939fca61cda2198bcb7 435 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 181 279 1.4E-13 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Y11_36221 f6b6ad7fe2856939fca61cda2198bcb7 435 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 289 435 1.8E-27 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Y11_27301 bf668bd46370239ba10ec2935e31fd9c 70 PIRSF PIRSF002599 1 70 7.6E-25 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 Y11_27301 bf668bd46370239ba10ec2935e31fd9c 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 13-10-2018 IPR019844 Cold-shock conserved site Y11_27301 bf668bd46370239ba10ec2935e31fd9c 70 PRINTS PR00050 Cold shock protein signature 7 22 1.7E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_27301 bf668bd46370239ba10ec2935e31fd9c 70 PRINTS PR00050 Cold shock protein signature 43 61 1.7E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_27301 bf668bd46370239ba10ec2935e31fd9c 70 PRINTS PR00050 Cold shock protein signature 28 37 1.7E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_27301 bf668bd46370239ba10ec2935e31fd9c 70 Gene3D G3DSA:2.40.50.140 2 68 1.6E-30 T 13-10-2018 Y11_27301 bf668bd46370239ba10ec2935e31fd9c 70 SMART SM00357 6 70 3.3E-33 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Y11_27301 bf668bd46370239ba10ec2935e31fd9c 70 SUPERFAMILY SSF50249 3 69 5.31E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_27301 bf668bd46370239ba10ec2935e31fd9c 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.4E-33 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_27731 3395a17a9a9fae90d747b85b361250b9 525 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 310 512 2.7E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_27731 3395a17a9a9fae90d747b85b361250b9 525 SUPERFAMILY SSF161098 272 514 1.7E-58 T 13-10-2018 IPR035906 MetI-like superfamily Y11_27731 3395a17a9a9fae90d747b85b361250b9 525 Gene3D G3DSA:2.40.430.10 126 215 8.0E-55 T 13-10-2018 Y11_27731 3395a17a9a9fae90d747b85b361250b9 525 Gene3D G3DSA:1.10.3720.10 281 525 3.6E-71 T 13-10-2018 IPR035906 MetI-like superfamily Y11_27731 3395a17a9a9fae90d747b85b361250b9 525 Gene3D G3DSA:1.20.58.370 9 103 7.6E-38 T 13-10-2018 IPR035277 MalF, N-terminal Y11_27731 3395a17a9a9fae90d747b85b361250b9 525 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 108 271 2.5E-62 T 13-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain Y11_27731 3395a17a9a9fae90d747b85b361250b9 525 Gene3D G3DSA:3.10.650.10 106 279 8.0E-55 T 13-10-2018 Y11_27731 3395a17a9a9fae90d747b85b361250b9 525 SUPERFAMILY SSF160964 23 271 4.45E-83 T 13-10-2018 Y11_07641 c33b98f751dabef0656f194595381ed9 288 Gene3D G3DSA:3.40.190.10 161 262 5.3E-9 T 13-10-2018 Y11_07641 c33b98f751dabef0656f194595381ed9 288 Gene3D G3DSA:3.40.190.10 104 272 5.3E-9 T 13-10-2018 Y11_07641 c33b98f751dabef0656f194595381ed9 288 SUPERFAMILY SSF46785 1 80 6.61E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_07641 c33b98f751dabef0656f194595381ed9 288 Gene3D G3DSA:1.10.10.10 1 87 1.4E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_07641 c33b98f751dabef0656f194595381ed9 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 57 6.8E-12 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_07641 c33b98f751dabef0656f194595381ed9 288 Pfam PF03466 LysR substrate binding domain 88 274 7.4E-12 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_07641 c33b98f751dabef0656f194595381ed9 288 SUPERFAMILY SSF53850 96 273 4.66E-14 T 13-10-2018 Y11_01541 2e16d3991af2bca71576d5f1f96c5840 407 SUPERFAMILY SSF53901 216 405 2.34E-61 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_01541 2e16d3991af2bca71576d5f1f96c5840 407 Gene3D G3DSA:3.40.47.10 261 407 2.6E-51 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_01541 2e16d3991af2bca71576d5f1f96c5840 407 Gene3D G3DSA:3.40.47.10 6 260 3.9E-61 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_01541 2e16d3991af2bca71576d5f1f96c5840 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 247 3.1E-41 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Y11_01541 2e16d3991af2bca71576d5f1f96c5840 407 SMART SM00825 Beta-ketoacyl synthase 4 407 3.5E-13 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Y11_01541 2e16d3991af2bca71576d5f1f96c5840 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site Y11_01541 2e16d3991af2bca71576d5f1f96c5840 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 362 3.1E-30 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Y11_01541 2e16d3991af2bca71576d5f1f96c5840 407 SUPERFAMILY SSF53901 1 254 6.05E-61 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_31041 e5bae0e8e91166ba804bd8c283434a46 510 Pfam PF07730 Histidine kinase 311 375 1.6E-9 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Y11_31041 e5bae0e8e91166ba804bd8c283434a46 510 Pfam PF05231 MASE1 7 283 8.6E-23 T 13-10-2018 IPR007895 MASE1 Y11_31041 e5bae0e8e91166ba804bd8c283434a46 510 Gene3D G3DSA:3.30.565.10 388 502 1.7E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_31041 e5bae0e8e91166ba804bd8c283434a46 510 SMART SM00387 414 504 5.8E-6 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_31041 e5bae0e8e91166ba804bd8c283434a46 510 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 417 476 5.8E-6 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_31041 e5bae0e8e91166ba804bd8c283434a46 510 SUPERFAMILY SSF55874 383 501 1.09E-15 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_34741 a187141497b809778720315d3f4247de 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 2.7E-82 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Y11_34741 a187141497b809778720315d3f4247de 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 Y11_34741 a187141497b809778720315d3f4247de 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 5.8E-142 T 13-10-2018 IPR002155 Thiolase GO:0016747 Y11_34741 a187141497b809778720315d3f4247de 387 PIRSF PIRSF000429 1 387 1.5E-131 T 13-10-2018 IPR002155 Thiolase GO:0016747 Y11_34741 a187141497b809778720315d3f4247de 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.517 T 13-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 Y11_34741 a187141497b809778720315d3f4247de 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Y11_34741 a187141497b809778720315d3f4247de 387 SUPERFAMILY SSF53901 1 258 3.4E-78 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_34741 a187141497b809778720315d3f4247de 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Y11_34741 a187141497b809778720315d3f4247de 387 Gene3D G3DSA:3.40.47.10 4 267 1.8E-152 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_34741 a187141497b809778720315d3f4247de 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 4.9E-226 T 13-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 Y11_34741 a187141497b809778720315d3f4247de 387 Gene3D G3DSA:3.40.47.10 134 381 1.8E-152 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_34741 a187141497b809778720315d3f4247de 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 2.8E-49 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Y11_34741 a187141497b809778720315d3f4247de 387 SUPERFAMILY SSF53901 262 386 1.34E-44 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_33751 3f3dfa51bb65be11005aec02c9c1fb56 418 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 39.807 T 13-10-2018 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 Y11_33751 3f3dfa51bb65be11005aec02c9c1fb56 418 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 5.5E-13 T 13-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Y11_36391 d4c6cf1de28e3f3f92ce35d28cd81d3c 443 SUPERFAMILY SSF56176 344 429 8.18E-22 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Y11_36391 d4c6cf1de28e3f3f92ce35d28cd81d3c 443 Pfam PF00571 CBS domain 287 333 0.003 T 13-10-2018 IPR000644 CBS domain Y11_36391 d4c6cf1de28e3f3f92ce35d28cd81d3c 443 Gene3D G3DSA:3.10.580.10 193 346 5.1E-33 T 13-10-2018 Y11_36391 d4c6cf1de28e3f3f92ce35d28cd81d3c 443 Pfam PF03471 Transporter associated domain 348 425 5.8E-20 T 13-10-2018 IPR005170 Transporter-associated domain Y11_36391 d4c6cf1de28e3f3f92ce35d28cd81d3c 443 Gene3D G3DSA:3.30.465.10 347 428 3.6E-29 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Y11_36391 d4c6cf1de28e3f3f92ce35d28cd81d3c 443 Pfam PF01595 Domain of unknown function DUF21 6 197 1.1E-37 T 13-10-2018 IPR002550 CNNM, transmembrane domain Y11_36391 d4c6cf1de28e3f3f92ce35d28cd81d3c 443 SUPERFAMILY SSF54631 200 335 1.05E-20 T 13-10-2018 Y11_36391 d4c6cf1de28e3f3f92ce35d28cd81d3c 443 SMART SM01091 346 426 1.6E-26 T 13-10-2018 IPR005170 Transporter-associated domain Y11_40821 100fbab787dd5d2e00449e5ea46319c3 269 SUPERFAMILY SSF69572 6 259 1.7E-63 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Y11_40821 100fbab787dd5d2e00449e5ea46319c3 269 Pfam PF00899 ThiF family 28 260 1.6E-38 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Y11_40821 100fbab787dd5d2e00449e5ea46319c3 269 Gene3D G3DSA:3.40.50.720 1 269 5.7E-112 T 13-10-2018 Y11_26851 e8d957e87dcb85c45575a837397a1673 446 Pfam PF01523 Putative modulator of DNA gyrase 32 323 3.2E-59 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Y11_26851 e8d957e87dcb85c45575a837397a1673 446 Gene3D G3DSA:3.30.2290.10 7 232 3.2E-93 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Y11_26851 e8d957e87dcb85c45575a837397a1673 446 SUPERFAMILY SSF111283 13 446 1.19E-128 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Y11_11201 60a85a8666d48633828846e64c414a9d 348 Gene3D G3DSA:3.90.650.10 164 347 3.2E-52 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Y11_11201 60a85a8666d48633828846e64c414a9d 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 335 3.9E-28 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Y11_11201 60a85a8666d48633828846e64c414a9d 348 SUPERFAMILY SSF56042 164 334 5.68E-50 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Y11_11201 60a85a8666d48633828846e64c414a9d 348 PIRSF PIRSF036407 1 347 1.8E-119 T 13-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 Y11_11201 60a85a8666d48633828846e64c414a9d 348 Gene3D G3DSA:3.30.1330.10 2 162 2.6E-47 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Y11_11201 60a85a8666d48633828846e64c414a9d 348 SUPERFAMILY SSF55326 7 160 2.84E-40 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Y11_11201 60a85a8666d48633828846e64c414a9d 348 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 2.7E-137 T 13-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 Y11_11201 60a85a8666d48633828846e64c414a9d 348 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 45.679 T 13-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 Y11_11201 60a85a8666d48633828846e64c414a9d 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 3.0E-18 T 13-10-2018 IPR016188 PurM-like, N-terminal domain Y11_21641 1b71747e9ed1615abac28b5f371c8baf 372 Gene3D G3DSA:3.30.70.360 166 280 2.7E-118 T 13-10-2018 Y11_21641 1b71747e9ed1615abac28b5f371c8baf 372 Gene3D G3DSA:3.40.630.10 18 356 2.7E-118 T 13-10-2018 Y11_21641 1b71747e9ed1615abac28b5f371c8baf 372 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 29 38 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Y11_21641 1b71747e9ed1615abac28b5f371c8baf 372 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 18 359 6.3E-101 T 13-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Y11_21641 1b71747e9ed1615abac28b5f371c8baf 372 SUPERFAMILY SSF53187 17 362 2.1E-65 T 13-10-2018 Y11_21641 1b71747e9ed1615abac28b5f371c8baf 372 SUPERFAMILY SSF55031 166 280 1.94E-23 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Y11_21641 1b71747e9ed1615abac28b5f371c8baf 372 Pfam PF01546 Peptidase family M20/M25/M40 30 359 2.0E-24 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 Y11_21641 1b71747e9ed1615abac28b5f371c8baf 372 PIRSF PIRSF001235 16 366 1.3E-113 T 13-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Y11_03941 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.1E-27 T 13-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Y11_03941 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SMART SM00316 4 72 4.3E-7 T 13-10-2018 IPR022967 RNA-binding domain, S1 Y11_03941 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Gene3D G3DSA:2.40.50.140 1 72 9.2E-36 T 13-10-2018 Y11_03941 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SUPERFAMILY SSF50249 1 70 1.18E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_03941 25ddc8d907d8c6cdf9a50a3e27ba432a 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.3E-38 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Y11_03941 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.17 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Y11_p0601 58b5242fb9e64f1e7b41e8eb2da32ce5 165 Gene3D G3DSA:1.10.10.1000 38 149 1.2E-58 T 13-10-2018 Y11_p0601 58b5242fb9e64f1e7b41e8eb2da32ce5 165 SUPERFAMILY SSF140591 43 145 4.71E-41 T 13-10-2018 Y11_p0601 58b5242fb9e64f1e7b41e8eb2da32ce5 165 Pfam PF09025 YopR, type III needle-polymerisation regulator 30 164 3.0E-58 T 13-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 Y11_p0601 58b5242fb9e64f1e7b41e8eb2da32ce5 165 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 34 163 1.6E-54 T 13-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 Y11_28871 14fcbb36692391251011fe3a73e643fd 346 Pfam PF00107 Zinc-binding dehydrogenase 179 306 4.2E-28 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Y11_28871 14fcbb36692391251011fe3a73e643fd 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Y11_28871 14fcbb36692391251011fe3a73e643fd 346 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 8 345 7.3E-183 T 13-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 Y11_28871 14fcbb36692391251011fe3a73e643fd 346 SUPERFAMILY SSF50129 5 178 1.52E-54 T 13-10-2018 IPR011032 GroES-like superfamily Y11_28871 14fcbb36692391251011fe3a73e643fd 346 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 6 345 60.469 T 13-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 Y11_28871 14fcbb36692391251011fe3a73e643fd 346 Gene3D G3DSA:3.90.180.10 26 333 3.6E-120 T 13-10-2018 Y11_28871 14fcbb36692391251011fe3a73e643fd 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 139 4.6E-32 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Y11_28871 14fcbb36692391251011fe3a73e643fd 346 SMART SM00829 17 343 2.9E-6 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Y11_28871 14fcbb36692391251011fe3a73e643fd 346 SUPERFAMILY SSF51735 146 310 6.26E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_28871 14fcbb36692391251011fe3a73e643fd 346 Gene3D G3DSA:3.40.50.720 158 291 3.6E-120 T 13-10-2018 Y11_20291 56ed19dcb44dc9cc0cbab53e488e52e1 236 SUPERFAMILY SSF52540 2 206 1.33E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_20291 56ed19dcb44dc9cc0cbab53e488e52e1 236 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_20291 56ed19dcb44dc9cc0cbab53e488e52e1 236 Pfam PF00005 ABC transporter 23 158 4.9E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_20291 56ed19dcb44dc9cc0cbab53e488e52e1 236 Gene3D G3DSA:3.40.50.300 1 226 2.5E-50 T 13-10-2018 Y11_20291 56ed19dcb44dc9cc0cbab53e488e52e1 236 SMART SM00382 26 208 6.0E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_06101 34eced84684df03acd8a6be5885593a3 79 Pfam PF10964 Protein of unknown function (DUF2766) 1 78 3.4E-48 T 13-10-2018 IPR020262 Uncharacterised protein family YecJ Y11_06101 34eced84684df03acd8a6be5885593a3 79 ProDom PD060536 YECJ YPO1738 1 79 6.0E-37 T 13-10-2018 IPR020262 Uncharacterised protein family YecJ Y11_03991 d05cb03c2bcc435df66c109c69695ac8 164 SMART SM00344 12 121 7.5E-55 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Y11_03991 d05cb03c2bcc435df66c109c69695ac8 164 Gene3D G3DSA:1.10.10.10 1 63 3.6E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_03991 d05cb03c2bcc435df66c109c69695ac8 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 58 5.0E-21 T 13-10-2018 Y11_03991 d05cb03c2bcc435df66c109c69695ac8 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Y11_03991 d05cb03c2bcc435df66c109c69695ac8 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Y11_03991 d05cb03c2bcc435df66c109c69695ac8 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Y11_03991 d05cb03c2bcc435df66c109c69695ac8 164 Gene3D G3DSA:3.30.70.920 64 159 2.1E-25 T 13-10-2018 Y11_03991 d05cb03c2bcc435df66c109c69695ac8 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 7.5E-25 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Y11_03991 d05cb03c2bcc435df66c109c69695ac8 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Y11_03991 d05cb03c2bcc435df66c109c69695ac8 164 SUPERFAMILY SSF46785 12 70 4.55E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_03991 d05cb03c2bcc435df66c109c69695ac8 164 SUPERFAMILY SSF54909 74 158 2.01E-22 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Y11_24641 41aaa4a7b0cb37bfe5303f53a27d8fb6 365 Pfam PF00437 Type II/IV secretion system protein 11 286 1.7E-79 T 13-10-2018 IPR001482 Type II/IV secretion system protein Y11_24641 41aaa4a7b0cb37bfe5303f53a27d8fb6 365 Gene3D G3DSA:3.30.450.380 1 105 2.1E-33 T 13-10-2018 Y11_24641 41aaa4a7b0cb37bfe5303f53a27d8fb6 365 Gene3D G3DSA:3.40.50.300 108 359 4.5E-72 T 13-10-2018 Y11_24641 41aaa4a7b0cb37bfe5303f53a27d8fb6 365 SUPERFAMILY SSF52540 2 293 3.69E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_p0571 30d3d5b8974639d2bc43237ecb72a270 208 Pfam PF06578 YOP proteins translocation protein K (YscK) 4 208 2.8E-92 T 13-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 Y11_p0571 30d3d5b8974639d2bc43237ecb72a270 208 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 5 206 7.0E-99 T 13-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 Y11_26761 68f03b4f6a2f8802c57f180bcd391ece 217 TIGRFAM TIGR03579 EF_0833: conserved hypothetical protein EF_0833/AHA_3914 8 216 1.6E-117 T 13-10-2018 IPR025456 Protein of unknown function DUF4310 Y11_26761 68f03b4f6a2f8802c57f180bcd391ece 217 Pfam PF14187 Domain of unknown function (DUF4310) 7 214 2.0E-105 T 13-10-2018 IPR025456 Protein of unknown function DUF4310 Y11_14371 50bde4b9670dbef2f2da4c1f670779f2 373 PRINTS PR01010 Flagellar P-ring protein signature 44 59 2.3E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_14371 50bde4b9670dbef2f2da4c1f670779f2 373 PRINTS PR01010 Flagellar P-ring protein signature 112 129 2.3E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_14371 50bde4b9670dbef2f2da4c1f670779f2 373 PRINTS PR01010 Flagellar P-ring protein signature 64 79 2.3E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_14371 50bde4b9670dbef2f2da4c1f670779f2 373 PRINTS PR01010 Flagellar P-ring protein signature 29 44 2.3E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_14371 50bde4b9670dbef2f2da4c1f670779f2 373 PRINTS PR01010 Flagellar P-ring protein signature 90 109 2.3E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_14371 50bde4b9670dbef2f2da4c1f670779f2 373 PRINTS PR01010 Flagellar P-ring protein signature 129 147 2.3E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_14371 50bde4b9670dbef2f2da4c1f670779f2 373 PRINTS PR01010 Flagellar P-ring protein signature 259 271 2.3E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_14371 50bde4b9670dbef2f2da4c1f670779f2 373 PRINTS PR01010 Flagellar P-ring protein signature 169 187 2.3E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_14371 50bde4b9670dbef2f2da4c1f670779f2 373 PRINTS PR01010 Flagellar P-ring protein signature 195 213 2.3E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_14371 50bde4b9670dbef2f2da4c1f670779f2 373 Hamap MF_00416 Flagellar P-ring protein [flgI]. 9 373 38.727 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_14371 50bde4b9670dbef2f2da4c1f670779f2 373 Pfam PF02119 Flagellar P-ring protein 29 372 1.1E-135 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_19391 dd024e0c3967d5d36f034ed766a6a285 64 Gene3D G3DSA:1.20.58.250 12 64 8.9E-8 T 13-10-2018 IPR036745 DNA polymerase III-theta superfamily GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_19391 dd024e0c3967d5d36f034ed766a6a285 64 SUPERFAMILY SSF46575 15 60 1.57E-7 T 13-10-2018 Y11_19391 dd024e0c3967d5d36f034ed766a6a285 64 Hamap MF_00525 Surface composition regulator [glgS]. 5 64 17.808 T 13-10-2018 IPR015065 Surface composition regulator Y11_19391 dd024e0c3967d5d36f034ed766a6a285 64 Pfam PF08971 Glycogen synthesis protein 11 58 2.4E-8 T 13-10-2018 IPR015065 Surface composition regulator Y11_11831 8a619bbcf5a98972a854963ba59f3ce8 205 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 205 1.0E-66 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Y11_11831 8a619bbcf5a98972a854963ba59f3ce8 205 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 205 32.393 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Y11_11831 8a619bbcf5a98972a854963ba59f3ce8 205 SUPERFAMILY SSF47781 66 136 4.45E-23 T 13-10-2018 IPR010994 RuvA domain 2-like Y11_11831 8a619bbcf5a98972a854963ba59f3ce8 205 Gene3D G3DSA:1.10.8.10 159 205 5.1E-22 T 13-10-2018 Y11_11831 8a619bbcf5a98972a854963ba59f3ce8 205 Gene3D G3DSA:2.40.50.140 1 66 9.0E-26 T 13-10-2018 Y11_11831 8a619bbcf5a98972a854963ba59f3ce8 205 Gene3D G3DSA:1.10.150.20 67 142 1.3E-30 T 13-10-2018 Y11_11831 8a619bbcf5a98972a854963ba59f3ce8 205 Pfam PF14520 Helix-hairpin-helix domain 72 130 4.4E-18 T 13-10-2018 Y11_11831 8a619bbcf5a98972a854963ba59f3ce8 205 Pfam PF07499 RuvA, C-terminal domain 162 203 1.6E-13 T 13-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 Y11_11831 8a619bbcf5a98972a854963ba59f3ce8 205 SMART SM00278 108 127 0.15 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Y11_11831 8a619bbcf5a98972a854963ba59f3ce8 205 SMART SM00278 73 92 0.054 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Y11_11831 8a619bbcf5a98972a854963ba59f3ce8 205 Pfam PF01330 RuvA N terminal domain 2 62 3.6E-18 T 13-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 Y11_11831 8a619bbcf5a98972a854963ba59f3ce8 205 SUPERFAMILY SSF46929 160 203 6.93E-10 T 13-10-2018 IPR036267 RuvA, C-terminal domain superfamily Y11_11831 8a619bbcf5a98972a854963ba59f3ce8 205 SUPERFAMILY SSF50249 2 63 1.26E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_00001 e3c7437a55e7ed05f9450e30df4e61e4 239 Gene3D G3DSA:1.10.8.60 173 239 1.6E-27 T 13-10-2018 Y11_00001 e3c7437a55e7ed05f9450e30df4e61e4 239 SUPERFAMILY SSF52540 24 217 1.98E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_00001 e3c7437a55e7ed05f9450e30df4e61e4 239 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 49 69 1.3E-6 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Y11_00001 e3c7437a55e7ed05f9450e30df4e61e4 239 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 137 164 1.3E-6 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Y11_00001 e3c7437a55e7ed05f9450e30df4e61e4 239 Gene3D G3DSA:3.40.50.300 3 170 1.4E-35 T 13-10-2018 Y11_00001 e3c7437a55e7ed05f9450e30df4e61e4 239 Pfam PF00308 Bacterial dnaA protein 22 218 2.5E-17 T 13-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Y11_00001 e3c7437a55e7ed05f9450e30df4e61e4 239 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 12 237 1.1E-84 T 13-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 Y11_00001 e3c7437a55e7ed05f9450e30df4e61e4 239 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 11 239 58.607 T 13-10-2018 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae Y11_42031 ecdfeb59eab2cbfa27870d4bf2e3a7d4 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 2.2E-14 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_42031 ecdfeb59eab2cbfa27870d4bf2e3a7d4 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 405 422 2.2E-14 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_42031 ecdfeb59eab2cbfa27870d4bf2e3a7d4 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 429 441 2.2E-14 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_42031 ecdfeb59eab2cbfa27870d4bf2e3a7d4 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 2.2E-14 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_42031 ecdfeb59eab2cbfa27870d4bf2e3a7d4 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 384 395 2.2E-14 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_42031 ecdfeb59eab2cbfa27870d4bf2e3a7d4 461 SUPERFAMILY SSF51445 1 455 1.06E-158 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_42031 ecdfeb59eab2cbfa27870d4bf2e3a7d4 461 Pfam PF00232 Glycosyl hydrolase family 1 2 460 3.1E-136 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_42031 ecdfeb59eab2cbfa27870d4bf2e3a7d4 461 Gene3D G3DSA:3.20.20.80 3 459 1.1E-151 T 13-10-2018 Y11_42031 ecdfeb59eab2cbfa27870d4bf2e3a7d4 461 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 360 368 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site Y11_14351 a02b3dd2cb6c8f3999fb1b3dd4c3a9b5 554 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 346 3.0E-72 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_14351 a02b3dd2cb6c8f3999fb1b3dd4c3a9b5 554 Pfam PF00460 Flagella basal body rod protein 6 35 8.5E-6 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Y11_14351 a02b3dd2cb6c8f3999fb1b3dd4c3a9b5 554 SUPERFAMILY SSF64518 98 552 8.5E-49 T 13-10-2018 Y11_14351 a02b3dd2cb6c8f3999fb1b3dd4c3a9b5 554 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 8.5E-84 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_14351 a02b3dd2cb6c8f3999fb1b3dd4c3a9b5 554 PRINTS PR01005 Flagellar hook-associated protein signature 260 282 8.5E-84 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_14351 a02b3dd2cb6c8f3999fb1b3dd4c3a9b5 554 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 8.5E-84 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_14351 a02b3dd2cb6c8f3999fb1b3dd4c3a9b5 554 PRINTS PR01005 Flagellar hook-associated protein signature 447 466 8.5E-84 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_14351 a02b3dd2cb6c8f3999fb1b3dd4c3a9b5 554 PRINTS PR01005 Flagellar hook-associated protein signature 472 493 8.5E-84 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_14351 a02b3dd2cb6c8f3999fb1b3dd4c3a9b5 554 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 8.5E-84 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_14351 a02b3dd2cb6c8f3999fb1b3dd4c3a9b5 554 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 8.5E-84 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_14351 a02b3dd2cb6c8f3999fb1b3dd4c3a9b5 554 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 8.5E-84 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_14351 a02b3dd2cb6c8f3999fb1b3dd4c3a9b5 554 PRINTS PR01005 Flagellar hook-associated protein signature 519 543 8.5E-84 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_14351 a02b3dd2cb6c8f3999fb1b3dd4c3a9b5 554 PRINTS PR01005 Flagellar hook-associated protein signature 124 144 8.5E-84 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_14351 a02b3dd2cb6c8f3999fb1b3dd4c3a9b5 554 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 492 551 9.6E-7 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Y11_00941 3aacc5aef3ad6c0bef25ea26e1507eb1 414 Gene3D G3DSA:1.20.1250.20 214 411 6.8E-22 T 13-10-2018 Y11_00941 3aacc5aef3ad6c0bef25ea26e1507eb1 414 SUPERFAMILY SSF103473 5 393 1.31E-47 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_00941 3aacc5aef3ad6c0bef25ea26e1507eb1 414 Pfam PF07690 Major Facilitator Superfamily 219 401 2.2E-17 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_00941 3aacc5aef3ad6c0bef25ea26e1507eb1 414 Gene3D G3DSA:1.20.1250.20 2 186 1.3E-20 T 13-10-2018 Y11_23931 e14480a616cc6fdc911881242d7a46bb 362 Gene3D G3DSA:1.10.3290.10 18 264 3.2E-46 T 13-10-2018 IPR036597 Fido-like domain superfamily Y11_23931 e14480a616cc6fdc911881242d7a46bb 362 Gene3D G3DSA:1.10.10.10 292 360 1.4E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_23931 e14480a616cc6fdc911881242d7a46bb 362 SUPERFAMILY SSF140931 78 256 1.09E-36 T 13-10-2018 IPR036597 Fido-like domain superfamily Y11_23931 e14480a616cc6fdc911881242d7a46bb 362 SUPERFAMILY SSF46785 301 361 6.96E-7 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_23931 e14480a616cc6fdc911881242d7a46bb 362 Pfam PF02661 Fic/DOC family 101 196 1.0E-21 T 13-10-2018 IPR003812 Fido domain Y11_23931 e14480a616cc6fdc911881242d7a46bb 362 Pfam PF08279 HTH domain 308 358 2.0E-6 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 Y11_38131 a6ba60914fc70661032d1b55da1e8d90 427 Pfam PF01381 Helix-turn-helix 7 58 2.1E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_38131 a6ba60914fc70661032d1b55da1e8d90 427 SMART SM00530 6 62 6.3E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_38131 a6ba60914fc70661032d1b55da1e8d90 427 SUPERFAMILY SSF52374 65 229 3.33E-20 T 13-10-2018 Y11_38131 a6ba60914fc70661032d1b55da1e8d90 427 SUPERFAMILY SSF47413 6 59 6.22E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_38131 a6ba60914fc70661032d1b55da1e8d90 427 PIRSF PIRSF004776 2 415 1.2E-218 T 13-10-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 Y11_38131 a6ba60914fc70661032d1b55da1e8d90 427 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 4.4E-19 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Y11_38131 a6ba60914fc70661032d1b55da1e8d90 427 Gene3D G3DSA:3.40.50.620 65 230 1.1E-44 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_38131 a6ba60914fc70661032d1b55da1e8d90 427 Gene3D G3DSA:1.10.260.40 5 64 5.5E-7 T 13-10-2018 Y11_38131 a6ba60914fc70661032d1b55da1e8d90 427 Pfam PF13521 AAA domain 234 394 1.9E-33 T 13-10-2018 IPR038727 NadR/Ttd14, AAA domain Y11_38131 a6ba60914fc70661032d1b55da1e8d90 427 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 4.3E-155 T 13-10-2018 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0000309|GO:0009435 KEGG: 00760+2.7.7.1+2.7.1.22 Y11_38131 a6ba60914fc70661032d1b55da1e8d90 427 SUPERFAMILY SSF52540 232 404 4.2E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_38131 a6ba60914fc70661032d1b55da1e8d90 427 Gene3D G3DSA:3.40.50.300 231 399 4.9E-58 T 13-10-2018 Y11_17011 c32eb7de3f23047683995f33f6607110 675 Pfam PF00361 Proton-conducting membrane transporter 135 419 5.3E-57 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17011 c32eb7de3f23047683995f33f6607110 675 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 237 261 4.1E-10 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17011 c32eb7de3f23047683995f33f6607110 675 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 388 414 4.1E-10 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17011 c32eb7de3f23047683995f33f6607110 675 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 168 192 4.1E-10 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_42141 0ee06b08c2fe3585a6a99a52a7e29604 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 3.0E-168 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Y11_42141 0ee06b08c2fe3585a6a99a52a7e29604 553 PIRSF PIRSF003128 1 553 5.3E-158 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Y11_42141 0ee06b08c2fe3585a6a99a52a7e29604 553 SUPERFAMILY SSF52540 1 514 2.96E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_42141 0ee06b08c2fe3585a6a99a52a7e29604 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 512 2.1E-19 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Y11_42141 0ee06b08c2fe3585a6a99a52a7e29604 553 Gene3D G3DSA:3.40.50.300 310 553 1.3E-51 T 13-10-2018 Y11_42141 0ee06b08c2fe3585a6a99a52a7e29604 553 Gene3D G3DSA:3.40.50.300 1 223 3.3E-44 T 13-10-2018 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 Gene3D G3DSA:1.10.1240.10 667 755 3.1E-40 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 SUPERFAMILY SSF51717 375 649 2.22E-88 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 SUPERFAMILY SSF52242 762 912 1.44E-46 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 TIGRFAM TIGR02082 metH: methionine synthase 32 1210 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 Pfam PF00809 Pterin binding enzyme 379 617 1.2E-61 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 Gene3D G3DSA:3.20.20.20 359 661 2.0E-128 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 Pfam PF02310 B12 binding domain 766 858 1.4E-18 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 Gene3D G3DSA:1.10.288.10 954 1110 2.8E-150 T 13-10-2018 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 Pfam PF02607 B12 binding domain 678 751 1.4E-23 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 PIRSF PIRSF000381 20 1213 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 Gene3D G3DSA:3.40.50.280 762 913 1.6E-56 T 13-10-2018 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 SUPERFAMILY SSF82282 26 418 4.05E-115 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 SUPERFAMILY SSF56507 921 1244 5.62E-134 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 Pfam PF02574 Homocysteine S-methyltransferase 36 344 1.7E-79 T 13-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 Gene3D G3DSA:3.10.196.10 927 1241 2.8E-150 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 SMART SM01018 675 758 7.3E-44 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 Gene3D G3DSA:3.20.20.330 20 357 3.8E-124 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 956 1226 1.1E-124 T 13-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_27811 90f54c013b66ed1649cbd22f28ef52a2 1245 SUPERFAMILY SSF47644 671 757 5.36E-28 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_37941 46566e12c4b126913c03a7003376149c 308 SUPERFAMILY SSF46785 4 85 8.06E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_37941 46566e12c4b126913c03a7003376149c 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.7E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_37941 46566e12c4b126913c03a7003376149c 308 SUPERFAMILY SSF53850 89 299 1.81E-39 T 13-10-2018 Y11_37941 46566e12c4b126913c03a7003376149c 308 Gene3D G3DSA:1.10.10.10 3 88 1.7E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_37941 46566e12c4b126913c03a7003376149c 308 Gene3D G3DSA:3.40.190.290 91 294 6.4E-52 T 13-10-2018 Y11_37941 46566e12c4b126913c03a7003376149c 308 Pfam PF03466 LysR substrate binding domain 89 294 3.3E-36 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_04301 b3eed82707126ae04b6e3f8d5a0ae3ae 60 Gene3D G3DSA:2.20.25.10 8 60 3.4E-23 T 13-10-2018 Y11_04301 b3eed82707126ae04b6e3f8d5a0ae3ae 60 Pfam PF03966 Trm112p-like protein 2 41 9.6E-9 T 13-10-2018 IPR005651 Trm112-like Y11_04301 b3eed82707126ae04b6e3f8d5a0ae3ae 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 26.584 T 13-10-2018 IPR038053 Uncharacterised protein family UPF0434 Y11_04301 b3eed82707126ae04b6e3f8d5a0ae3ae 60 SUPERFAMILY SSF158997 1 54 8.11E-20 T 13-10-2018 Y11_24511 05c5aaa070d4cecc66f0230f2562cbb0 408 SUPERFAMILY SSF56317 174 390 6.63E-5 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Y11_26691 2b17a8ad49979fcc86fd83ab59307576 69 SUPERFAMILY SSF47413 1 54 4.82E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_26691 2b17a8ad49979fcc86fd83ab59307576 69 Gene3D G3DSA:1.10.260.40 1 63 1.4E-16 T 13-10-2018 Y11_26691 2b17a8ad49979fcc86fd83ab59307576 69 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 1 49 1.2E-17 T 13-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 Y11_42191 df36712b86b3acb7367d5e26c9f1e340 127 Gene3D G3DSA:3.20.70.20 60 127 2.3E-25 T 13-10-2018 Y11_42191 df36712b86b3acb7367d5e26c9f1e340 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 43.282 T 13-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA Y11_42191 df36712b86b3acb7367d5e26c9f1e340 127 PIRSF PIRSF000378 2 127 3.6E-55 T 13-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA Y11_42191 df36712b86b3acb7367d5e26c9f1e340 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 1.2E-72 T 13-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA Y11_42191 df36712b86b3acb7367d5e26c9f1e340 127 Pfam PF01228 Glycine radical 14 108 1.6E-23 T 13-10-2018 IPR001150 Glycine radical domain GO:0003824 Y11_42191 df36712b86b3acb7367d5e26c9f1e340 127 SUPERFAMILY SSF51998 27 125 7.78E-25 T 13-10-2018 Y11_42191 df36712b86b3acb7367d5e26c9f1e340 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 13-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Y11_35921 ec99c51f7cd3cc337fdc8b5dd681da85 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 1.1E-76 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Y11_35921 ec99c51f7cd3cc337fdc8b5dd681da85 188 SUPERFAMILY SSF50104 6 64 5.78E-18 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Y11_35921 ec99c51f7cd3cc337fdc8b5dd681da85 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 1.1E-22 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Y11_35921 ec99c51f7cd3cc337fdc8b5dd681da85 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 50.091 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Y11_35921 ec99c51f7cd3cc337fdc8b5dd681da85 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.0E-25 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Y11_35921 ec99c51f7cd3cc337fdc8b5dd681da85 188 SUPERFAMILY SSF50249 67 128 7.71E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_35921 ec99c51f7cd3cc337fdc8b5dd681da85 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 62 6.8E-24 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like Y11_35921 ec99c51f7cd3cc337fdc8b5dd681da85 188 Gene3D G3DSA:2.40.50.140 130 188 7.7E-28 T 13-10-2018 Y11_35921 ec99c51f7cd3cc337fdc8b5dd681da85 188 Gene3D G3DSA:2.30.30.30 1 65 5.9E-27 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Y11_35921 ec99c51f7cd3cc337fdc8b5dd681da85 188 Gene3D G3DSA:2.40.50.140 66 129 1.2E-30 T 13-10-2018 Y11_35921 ec99c51f7cd3cc337fdc8b5dd681da85 188 SMART SM00841 131 186 3.0E-32 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Y11_35921 ec99c51f7cd3cc337fdc8b5dd681da85 188 SUPERFAMILY SSF50249 130 187 1.88E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_35921 ec99c51f7cd3cc337fdc8b5dd681da85 188 SMART SM01185 69 123 7.5E-26 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Y11_35921 ec99c51f7cd3cc337fdc8b5dd681da85 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 13-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Y11_35921 ec99c51f7cd3cc337fdc8b5dd681da85 188 PIRSF PIRSF005901 2 188 7.0E-67 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP Y11_01041 449deca65506c0944ff6914c7f27a285 212 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 20 204 1.4E-71 T 13-10-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 Y11_01041 449deca65506c0944ff6914c7f27a285 212 Pfam PF01810 LysE type translocator 17 208 3.1E-44 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Y11_01041 449deca65506c0944ff6914c7f27a285 212 PIRSF PIRSF006324 1 209 6.5E-43 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Y11_27461 082f8f7f2644d12e4e409b614af33d51 223 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 74 3.1E-16 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Y11_27461 082f8f7f2644d12e4e409b614af33d51 223 Gene3D G3DSA:3.40.30.10 1 83 1.0E-36 T 13-10-2018 Y11_27461 082f8f7f2644d12e4e409b614af33d51 223 Pfam PF00043 Glutathione S-transferase, C-terminal domain 143 206 6.6E-8 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal Y11_27461 082f8f7f2644d12e4e409b614af33d51 223 Gene3D G3DSA:1.20.1050.10 86 212 8.8E-27 T 13-10-2018 Y11_27461 082f8f7f2644d12e4e409b614af33d51 223 SUPERFAMILY SSF47616 84 215 1.21E-22 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Y11_27461 082f8f7f2644d12e4e409b614af33d51 223 SUPERFAMILY SSF52833 3 78 3.83E-21 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_22371 b40e415fc2109c9233bb600ffcec7753 319 SUPERFAMILY SSF46785 17 54 3.54E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_22371 b40e415fc2109c9233bb600ffcec7753 319 Gene3D G3DSA:3.40.50.1360 52 316 2.4E-81 T 13-10-2018 Y11_22371 b40e415fc2109c9233bb600ffcec7753 319 SUPERFAMILY SSF100950 60 316 1.34E-61 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_22371 b40e415fc2109c9233bb600ffcec7753 319 Gene3D G3DSA:1.10.10.60 1 51 3.0E-24 T 13-10-2018 Y11_22371 b40e415fc2109c9233bb600ffcec7753 319 Pfam PF13545 Crp-like helix-turn-helix domain 20 52 2.3E-6 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Y11_22371 b40e415fc2109c9233bb600ffcec7753 319 Pfam PF04198 Putative sugar-binding domain 58 315 1.5E-69 T 13-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 Y11_33081 7bf5940c47f2cb6153db89b8e0008507 47 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 10 47 1.0E-21 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_33081 7bf5940c47f2cb6153db89b8e0008507 47 Pfam PF00444 Ribosomal protein L36 10 47 3.6E-20 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_33081 7bf5940c47f2cb6153db89b8e0008507 47 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 10 47 17.971 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_33081 7bf5940c47f2cb6153db89b8e0008507 47 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 18 47 3.0E-10 T 13-10-2018 Y11_33081 7bf5940c47f2cb6153db89b8e0008507 47 SUPERFAMILY SSF57840 10 47 1.24E-16 T 13-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_33081 7bf5940c47f2cb6153db89b8e0008507 47 ProSitePatterns PS00828 Ribosomal protein L36 signature. 20 46 - T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_10781 b9d16f7ef3191afae045827b677aa995 458 Pfam PF00218 Indole-3-glycerol phosphate synthase 11 257 1.7E-96 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Y11_10781 b9d16f7ef3191afae045827b677aa995 458 Gene3D G3DSA:3.20.20.70 14 261 3.9E-183 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_10781 b9d16f7ef3191afae045827b677aa995 458 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 263 453 1.1E-58 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Y11_10781 b9d16f7ef3191afae045827b677aa995 458 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 13-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 Y11_10781 b9d16f7ef3191afae045827b677aa995 458 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 261 458 30.508 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Y11_10781 b9d16f7ef3191afae045827b677aa995 458 SUPERFAMILY SSF51366 9 257 5.53E-84 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Y11_10781 b9d16f7ef3191afae045827b677aa995 458 SUPERFAMILY SSF51366 263 456 2.83E-58 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Y11_10781 b9d16f7ef3191afae045827b677aa995 458 Gene3D G3DSA:3.20.20.70 262 452 3.9E-183 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_10781 b9d16f7ef3191afae045827b677aa995 458 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 9 260 34.903 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Y11_11161 2e685022087cdf0c69558e68d62513a7 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 13-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Y11_11161 2e685022087cdf0c69558e68d62513a7 268 SUPERFAMILY SSF56219 1 267 7.98E-88 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Y11_11161 2e685022087cdf0c69558e68d62513a7 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 13-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 Y11_11161 2e685022087cdf0c69558e68d62513a7 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 6.6E-23 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Y11_11161 2e685022087cdf0c69558e68d62513a7 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 2.4E-105 T 13-10-2018 Y11_11161 2e685022087cdf0c69558e68d62513a7 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 6.2E-89 T 13-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Y11_11161 2e685022087cdf0c69558e68d62513a7 268 Gene3D G3DSA:3.60.10.10 1 267 1.0E-83 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Y11_25271 056650e66e9815f0f9d0e0dcaa1f0d5f 213 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 12 211 9.8E-61 T 13-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 Y11_25271 056650e66e9815f0f9d0e0dcaa1f0d5f 213 Gene3D G3DSA:2.40.50.230 1 89 1.9E-32 T 13-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily Y11_25271 056650e66e9815f0f9d0e0dcaa1f0d5f 213 Gene3D G3DSA:2.60.220.40 91 163 2.8E-27 T 13-10-2018 Y11_25271 056650e66e9815f0f9d0e0dcaa1f0d5f 213 Pfam PF04717 Type VI secretion system, phage-baseplate injector 9 119 3.2E-44 T 13-10-2018 IPR006531 Gp5 N-terminal Y11_13381 056650e66e9815f0f9d0e0dcaa1f0d5f 213 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 12 211 9.8E-61 T 13-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 Y11_13381 056650e66e9815f0f9d0e0dcaa1f0d5f 213 Gene3D G3DSA:2.40.50.230 1 89 1.9E-32 T 13-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily Y11_13381 056650e66e9815f0f9d0e0dcaa1f0d5f 213 Gene3D G3DSA:2.60.220.40 91 163 2.8E-27 T 13-10-2018 Y11_13381 056650e66e9815f0f9d0e0dcaa1f0d5f 213 Pfam PF04717 Type VI secretion system, phage-baseplate injector 9 119 3.2E-44 T 13-10-2018 IPR006531 Gp5 N-terminal Y11_29191 2b3d3baba212c4bc1d9bf0df707b293e 693 SUPERFAMILY SSF52540 292 653 1.38E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_29191 2b3d3baba212c4bc1d9bf0df707b293e 693 SUPERFAMILY SSF52540 208 453 1.62E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_29191 2b3d3baba212c4bc1d9bf0df707b293e 693 Pfam PF00270 DEAD/DEAH box helicase 272 431 5.6E-19 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Y11_29191 2b3d3baba212c4bc1d9bf0df707b293e 693 SMART SM00487 265 459 1.6E-30 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Y11_29191 2b3d3baba212c4bc1d9bf0df707b293e 693 SMART SM00490 505 589 2.0E-21 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_29191 2b3d3baba212c4bc1d9bf0df707b293e 693 Gene3D G3DSA:3.40.50.300 208 450 6.4E-82 T 13-10-2018 Y11_29191 2b3d3baba212c4bc1d9bf0df707b293e 693 Gene3D G3DSA:3.40.50.300 457 630 3.1E-50 T 13-10-2018 Y11_29191 2b3d3baba212c4bc1d9bf0df707b293e 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 5.3E-243 T 13-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 Y11_29191 2b3d3baba212c4bc1d9bf0df707b293e 693 SUPERFAMILY SSF50249 9 174 3.34E-42 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_29191 2b3d3baba212c4bc1d9bf0df707b293e 693 Gene3D G3DSA:2.40.50.140 47 141 7.2E-14 T 13-10-2018 Y11_29191 2b3d3baba212c4bc1d9bf0df707b293e 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 2.3E-16 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_29191 2b3d3baba212c4bc1d9bf0df707b293e 693 Pfam PF17191 RecG wedge domain 15 172 1.9E-21 T 13-10-2018 IPR033454 RecG, wedge domain Y11_26801 5215f603149b58e2220737227494c516 114 Gene3D G3DSA:1.10.1790.10 9 113 1.6E-34 T 13-10-2018 Y11_26801 5215f603149b58e2220737227494c516 114 SUPERFAMILY SSF63520 25 112 4.58E-8 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 Y11_26801 5215f603149b58e2220737227494c516 114 TIGRFAM TIGR03582 EF_0829: PRD domain protein, EF_0829/AHA_3910 family 22 112 3.2E-38 T 13-10-2018 IPR020044 PRD domain protein, EF0829/AHA3910 Y11_24791 d4a3049809820f15b951507f8cec01d5 475 SUPERFAMILY SSF49503 173 292 7.48E-31 T 13-10-2018 IPR008972 Cupredoxin Y11_24791 d4a3049809820f15b951507f8cec01d5 475 Gene3D G3DSA:2.60.40.420 30 165 7.1E-32 T 13-10-2018 IPR008972 Cupredoxin Y11_24791 d4a3049809820f15b951507f8cec01d5 475 Pfam PF07731 Multicopper oxidase 361 469 8.5E-13 T 13-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 Y11_24791 d4a3049809820f15b951507f8cec01d5 475 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 469 57.867 T 13-10-2018 IPR026589 Cell division protein FtsP GO:0043093 Y11_24791 d4a3049809820f15b951507f8cec01d5 475 SUPERFAMILY SSF49503 3 166 4.77E-26 T 13-10-2018 IPR008972 Cupredoxin Y11_24791 d4a3049809820f15b951507f8cec01d5 475 Pfam PF00394 Multicopper oxidase 230 288 5.3E-4 T 13-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 Y11_24791 d4a3049809820f15b951507f8cec01d5 475 Gene3D G3DSA:2.60.40.420 166 346 2.4E-54 T 13-10-2018 IPR008972 Cupredoxin Y11_24791 d4a3049809820f15b951507f8cec01d5 475 Gene3D G3DSA:2.60.40.420 347 473 2.6E-23 T 13-10-2018 IPR008972 Cupredoxin Y11_24791 d4a3049809820f15b951507f8cec01d5 475 SUPERFAMILY SSF49503 316 466 6.2E-17 T 13-10-2018 IPR008972 Cupredoxin Y11_24791 d4a3049809820f15b951507f8cec01d5 475 Pfam PF07732 Multicopper oxidase 53 167 1.8E-26 T 13-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 Y11_17131 264b9c18adb6bff21329ad2e2d65e784 714 SUPERFAMILY SSF53706 5 561 9.03E-197 T 13-10-2018 Y11_17131 264b9c18adb6bff21329ad2e2d65e784 714 SMART SM00926 1 54 1.8E-14 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17131 264b9c18adb6bff21329ad2e2d65e784 714 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 5 53 1.5E-13 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17131 264b9c18adb6bff21329ad2e2d65e784 714 Gene3D G3DSA:3.40.50.740 66 530 6.5E-176 T 13-10-2018 Y11_17131 264b9c18adb6bff21329ad2e2d65e784 714 Gene3D G3DSA:2.20.25.90 1 55 7.9E-17 T 13-10-2018 Y11_17131 264b9c18adb6bff21329ad2e2d65e784 714 Gene3D G3DSA:3.40.228.10 142 340 6.5E-176 T 13-10-2018 Y11_17131 264b9c18adb6bff21329ad2e2d65e784 714 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 23 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Y11_17131 264b9c18adb6bff21329ad2e2d65e784 714 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 6 683 3.2E-278 T 13-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 Y11_17131 264b9c18adb6bff21329ad2e2d65e784 714 PIRSF PIRSF000144 53 439 2.9E-54 T 13-10-2018 Y11_17131 264b9c18adb6bff21329ad2e2d65e784 714 PIRSF PIRSF000144 542 691 0.3 T 13-10-2018 Y11_17131 264b9c18adb6bff21329ad2e2d65e784 714 Pfam PF00384 Molybdopterin oxidoreductase 61 485 1.4E-95 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17131 264b9c18adb6bff21329ad2e2d65e784 714 Pfam PF01568 Molydopterin dinucleotide binding domain 574 681 7.4E-28 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Y11_17131 264b9c18adb6bff21329ad2e2d65e784 714 Gene3D G3DSA:2.40.40.20 571 687 2.7E-41 T 13-10-2018 Y11_17131 264b9c18adb6bff21329ad2e2d65e784 714 SUPERFAMILY SSF50692 564 701 3.16E-42 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Y11_06341 46878927857396c8b28c7edd03f717b0 454 Pfam PF03315 Serine dehydratase beta chain 3 155 7.3E-56 T 13-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Y11_06341 46878927857396c8b28c7edd03f717b0 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 3.5E-224 T 13-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Y11_06341 46878927857396c8b28c7edd03f717b0 454 SUPERFAMILY SSF143548 16 158 1.28E-45 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Y11_06341 46878927857396c8b28c7edd03f717b0 454 Gene3D G3DSA:3.30.1330.90 10 159 1.5E-51 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Y11_06341 46878927857396c8b28c7edd03f717b0 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.7E-95 T 13-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Y11_05201 88aa305f77a2ce330f74af5f0b5960b3 1152 Hamap MF_00970 Ribonuclease E [rne]. 1 1138 39.032 T 13-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 Y11_05201 88aa305f77a2ce330f74af5f0b5960b3 1152 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 422 1.5E-169 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Y11_05201 88aa305f77a2ce330f74af5f0b5960b3 1152 Gene3D G3DSA:3.40.1260.20 398 507 3.8E-42 T 13-10-2018 Y11_05201 88aa305f77a2ce330f74af5f0b5960b3 1152 SUPERFAMILY SSF50249 37 121 8.1E-21 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_05201 88aa305f77a2ce330f74af5f0b5960b3 1152 Gene3D G3DSA:2.40.50.140 29 122 8.8E-34 T 13-10-2018 Y11_05201 88aa305f77a2ce330f74af5f0b5960b3 1152 Pfam PF10150 Ribonuclease E/G family 118 388 7.0E-92 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Y11_05201 88aa305f77a2ce330f74af5f0b5960b3 1152 Pfam PF00575 S1 RNA binding domain 33 115 1.4E-16 T 13-10-2018 IPR003029 S1 domain GO:0003676 Y11_05201 88aa305f77a2ce330f74af5f0b5960b3 1152 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1116 1149 2.1E-13 T 13-10-2018 IPR021968 Polyribonucleotide phosphorylase C-terminal Y11_05201 88aa305f77a2ce330f74af5f0b5960b3 1152 SMART SM00316 34 116 8.4E-13 T 13-10-2018 IPR022967 RNA-binding domain, S1 Y11_17241 4c5f7d68ef979738a9a73569f3831343 384 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 129 6.9E-25 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Y11_17241 4c5f7d68ef979738a9a73569f3831343 384 Pfam PF00107 Zinc-binding dehydrogenase 200 327 7.8E-24 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Y11_17241 4c5f7d68ef979738a9a73569f3831343 384 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Y11_17241 4c5f7d68ef979738a9a73569f3831343 384 SUPERFAMILY SSF50129 2 190 6.7E-74 T 13-10-2018 IPR011032 GroES-like superfamily Y11_17241 4c5f7d68ef979738a9a73569f3831343 384 Gene3D G3DSA:3.40.50.720 177 315 6.7E-156 T 13-10-2018 Y11_17241 4c5f7d68ef979738a9a73569f3831343 384 SMART SM00829 13 370 4.3E-4 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Y11_17241 4c5f7d68ef979738a9a73569f3831343 384 SUPERFAMILY SSF50129 321 372 2.26E-12 T 13-10-2018 IPR011032 GroES-like superfamily Y11_17241 4c5f7d68ef979738a9a73569f3831343 384 SUPERFAMILY SSF51735 163 337 4.91E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_17241 4c5f7d68ef979738a9a73569f3831343 384 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 5 372 1.2E-224 T 13-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 Y11_17241 4c5f7d68ef979738a9a73569f3831343 384 Gene3D G3DSA:3.90.180.10 9 367 6.7E-156 T 13-10-2018 Y11_11211 ef56b372b0652bd79f9b608685a79544 183 SUPERFAMILY SSF55469 1 182 1.28E-38 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Y11_11211 ef56b372b0652bd79f9b608685a79544 183 Pfam PF00881 Nitroreductase family 8 161 6.5E-21 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Y11_11211 ef56b372b0652bd79f9b608685a79544 183 PIRSF PIRSF000232 1 183 1.7E-62 T 13-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like Y11_11211 ef56b372b0652bd79f9b608685a79544 183 Gene3D G3DSA:3.40.109.10 1 183 3.0E-42 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Y11_43241 d97975c534721d6f56044b2f9faca172 299 Gene3D G3DSA:2.60.200.40 126 284 4.3E-89 T 13-10-2018 Y11_43241 d97975c534721d6f56044b2f9faca172 299 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 3 293 7.7E-96 T 13-10-2018 IPR005218 Diacylglycerol/lipid kinase Y11_43241 d97975c534721d6f56044b2f9faca172 299 Pfam PF00781 Diacylglycerol kinase catalytic domain 7 129 3.7E-29 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Y11_43241 d97975c534721d6f56044b2f9faca172 299 Gene3D G3DSA:3.40.50.10330 25 287 4.3E-89 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Y11_43241 d97975c534721d6f56044b2f9faca172 299 SMART SM00046 6 132 3.8E-20 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Y11_43241 d97975c534721d6f56044b2f9faca172 299 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 6 298 7.6E-147 T 13-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 Y11_43241 d97975c534721d6f56044b2f9faca172 299 SUPERFAMILY SSF111331 2 296 8.28E-70 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Y11_43241 d97975c534721d6f56044b2f9faca172 299 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 6 299 46.616 T 13-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 Y11_26731 9d8a59bf4b3c0d51b9729f02b77d2679 202 Pfam PF07071 KDGP aldolase 8 202 2.3E-97 T 13-10-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Y11_26731 9d8a59bf4b3c0d51b9729f02b77d2679 202 Gene3D G3DSA:3.20.20.70 1 202 1.3E-95 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_26731 9d8a59bf4b3c0d51b9729f02b77d2679 202 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 8 202 2.8E-100 T 13-10-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Y11_43391 f1c918d513b82b1ef086c1febd1cdeb9 689 SUPERFAMILY SSF56024 316 497 2.98E-55 T 13-10-2018 Y11_43391 f1c918d513b82b1ef086c1febd1cdeb9 689 PIRSF PIRSF015589 1 688 1.3E-240 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Y11_43391 f1c918d513b82b1ef086c1febd1cdeb9 689 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 3.0E-256 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Y11_43391 f1c918d513b82b1ef086c1febd1cdeb9 689 Gene3D G3DSA:3.30.1840.10 110 307 5.7E-75 T 13-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 Y11_43391 f1c918d513b82b1ef086c1febd1cdeb9 689 SUPERFAMILY SSF56024 500 682 1.61E-68 T 13-10-2018 Y11_43391 f1c918d513b82b1ef086c1febd1cdeb9 689 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 1.2E-143 T 13-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 Y11_43391 f1c918d513b82b1ef086c1febd1cdeb9 689 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 2.5E-31 T 13-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 Y11_43391 f1c918d513b82b1ef086c1febd1cdeb9 689 SUPERFAMILY SSF140356 3 105 3.01E-34 T 13-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 Y11_43391 f1c918d513b82b1ef086c1febd1cdeb9 689 Pfam PF02503 Polyphosphate kinase middle domain 119 319 5.0E-42 T 13-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 Y11_43391 f1c918d513b82b1ef086c1febd1cdeb9 689 Gene3D G3DSA:3.30.870.10 500 686 1.0E-71 T 13-10-2018 Y11_43391 f1c918d513b82b1ef086c1febd1cdeb9 689 SUPERFAMILY SSF143724 107 313 1.57E-59 T 13-10-2018 Y11_43391 f1c918d513b82b1ef086c1febd1cdeb9 689 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.202 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Y11_43391 f1c918d513b82b1ef086c1febd1cdeb9 689 Gene3D G3DSA:3.30.870.10 316 499 6.3E-74 T 13-10-2018 Y11_43391 f1c918d513b82b1ef086c1febd1cdeb9 689 Gene3D G3DSA:1.20.58.310 9 109 5.1E-38 T 13-10-2018 Y11_03021 f2b5c6edce38a6177301fc824229c41a 115 Pfam PF13989 YejG-like protein 4 109 5.1E-49 T 13-10-2018 IPR020489 Uncharacterised protein family YejG Y11_03021 f2b5c6edce38a6177301fc824229c41a 115 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 115 3.0E-52 T 13-10-2018 IPR020489 Uncharacterised protein family YejG Y11_11611 b57e73dea97e6a7c2f3b8b21224ce6df 89 Gene3D G3DSA:3.30.1070.10 31 87 5.9E-28 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Y11_11611 b57e73dea97e6a7c2f3b8b21224ce6df 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 2.9E-24 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Y11_11611 b57e73dea97e6a7c2f3b8b21224ce6df 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 3.0E-33 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Y11_11611 b57e73dea97e6a7c2f3b8b21224ce6df 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 18.604 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Y11_11611 b57e73dea97e6a7c2f3b8b21224ce6df 89 SUPERFAMILY SSF55229 32 85 1.44E-17 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Y11_18501 7490feda5570a7c1f1f43a6abecde408 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 207 5.2E-42 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Y11_18501 7490feda5570a7c1f1f43a6abecde408 228 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 4 224 43.455 T 13-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Y11_18501 7490feda5570a7c1f1f43a6abecde408 228 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 6.5E-94 T 13-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Y11_35631 4bbefcc4347ce2535b548f247c9b96be 778 Gene3D G3DSA:2.30.30.60 624 672 7.3E-13 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Y11_35631 4bbefcc4347ce2535b548f247c9b96be 778 SUPERFAMILY SSF82861 523 607 1.31E-11 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Y11_35631 4bbefcc4347ce2535b548f247c9b96be 778 SUPERFAMILY SSF50182 609 673 2.75E-15 T 13-10-2018 IPR010920 LSM domain superfamily Y11_35631 4bbefcc4347ce2535b548f247c9b96be 778 Gene3D G3DSA:3.30.70.100 681 770 5.8E-8 T 13-10-2018 Y11_35631 4bbefcc4347ce2535b548f247c9b96be 778 SUPERFAMILY SSF82689 682 774 2.62E-11 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Y11_35631 4bbefcc4347ce2535b548f247c9b96be 778 Pfam PF00924 Mechanosensitive ion channel 567 764 1.4E-41 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Y11_35631 4bbefcc4347ce2535b548f247c9b96be 778 Pfam PF12607 Protein of unknown function (DUF3772) 118 177 8.5E-16 T 13-10-2018 IPR022249 Domain of unknown function DUF3772 Y11_24731 b8593faae1b6feeaf00c5f154d75319f 403 PIRSF PIRSF001434 1 400 4.3E-116 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Y11_24731 b8593faae1b6feeaf00c5f154d75319f 403 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 207 221 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Y11_24731 b8593faae1b6feeaf00c5f154d75319f 403 SUPERFAMILY SSF53383 28 398 2.94E-87 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_24731 b8593faae1b6feeaf00c5f154d75319f 403 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 13 399 3.5E-169 T 13-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 Y11_24731 b8593faae1b6feeaf00c5f154d75319f 403 Gene3D G3DSA:3.40.640.10 7 263 3.5E-69 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_24731 b8593faae1b6feeaf00c5f154d75319f 403 Gene3D G3DSA:3.90.1150.10 264 400 2.6E-41 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_24731 b8593faae1b6feeaf00c5f154d75319f 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 397 3.7E-113 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Y11_30251 9ea8e590bb0001c45b966cad861c4a46 485 Gene3D G3DSA:1.20.1720.10 23 236 1.3E-26 T 13-10-2018 Y11_30251 9ea8e590bb0001c45b966cad861c4a46 485 Gene3D G3DSA:1.20.1250.20 271 474 1.9E-7 T 13-10-2018 Y11_30251 9ea8e590bb0001c45b966cad861c4a46 485 Pfam PF07690 Major Facilitator Superfamily 30 420 1.2E-31 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_30251 9ea8e590bb0001c45b966cad861c4a46 485 SUPERFAMILY SSF103473 24 452 2.88E-38 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_00641 9c218eaf539e55697f656dec8907d63b 363 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_00641 9c218eaf539e55697f656dec8907d63b 363 SMART SM00382 27 214 1.7E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_00641 9c218eaf539e55697f656dec8907d63b 363 SUPERFAMILY SSF50331 239 326 2.44E-9 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Y11_00641 9c218eaf539e55697f656dec8907d63b 363 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 2.8E-125 T 13-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 Y11_00641 9c218eaf539e55697f656dec8907d63b 363 Pfam PF00005 ABC transporter 18 164 1.9E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_00641 9c218eaf539e55697f656dec8907d63b 363 SUPERFAMILY SSF52540 3 244 3.13E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_00641 9c218eaf539e55697f656dec8907d63b 363 Gene3D G3DSA:3.40.50.300 2 264 7.5E-81 T 13-10-2018 Y11_41491 5fdcbf328781886a963e2a3a668e6b8c 154 Pfam PF00075 RNase H 3 141 4.3E-53 T 13-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Y11_41491 5fdcbf328781886a963e2a3a668e6b8c 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 37.41 T 13-10-2018 IPR022892 Ribonuclease HI GO:0004523 Y11_41491 5fdcbf328781886a963e2a3a668e6b8c 154 SUPERFAMILY SSF53098 3 143 3.92E-57 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_41491 5fdcbf328781886a963e2a3a668e6b8c 154 Gene3D G3DSA:3.30.420.10 1 154 5.1E-59 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_25431 f361c53f6801bca72f60dbc46974bcd0 345 PIRSF PIRSF018494 1 345 3.9E-157 T 13-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria Y11_25431 f361c53f6801bca72f60dbc46974bcd0 345 Pfam PF04860 Phage portal protein 96 338 1.5E-15 T 13-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein Y11_25431 f361c53f6801bca72f60dbc46974bcd0 345 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 54 334 5.3E-87 T 13-10-2018 IPR006430 Phage portal protein PBSX family Y11_02191 bb15df2737898cecbdc393b27ec94c8b 455 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 358 369 - T 13-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02191 bb15df2737898cecbdc393b27ec94c8b 455 SUPERFAMILY SSF142984 257 339 6.15E-22 T 13-10-2018 Y11_02191 bb15df2737898cecbdc393b27ec94c8b 455 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 181 196 - T 13-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02191 bb15df2737898cecbdc393b27ec94c8b 455 SMART SM00928 345 390 2.0E-21 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02191 bb15df2737898cecbdc393b27ec94c8b 455 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 20 432 2.1E-199 T 13-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02191 bb15df2737898cecbdc393b27ec94c8b 455 Gene3D G3DSA:3.10.20.600 248 342 2.0E-28 T 13-10-2018 Y11_02191 bb15df2737898cecbdc393b27ec94c8b 455 SUPERFAMILY SSF140490 343 435 5.36E-31 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02191 bb15df2737898cecbdc393b27ec94c8b 455 Gene3D G3DSA:1.20.1440.230 343 443 7.9E-28 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02191 bb15df2737898cecbdc393b27ec94c8b 455 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 61 233 3.2E-50 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02191 bb15df2737898cecbdc393b27ec94c8b 455 SUPERFAMILY SSF142019 23 252 1.96E-84 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02191 bb15df2737898cecbdc393b27ec94c8b 455 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 348 430 2.4E-26 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02191 bb15df2737898cecbdc393b27ec94c8b 455 Gene3D G3DSA:3.40.50.11540 66 245 2.0E-78 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_06081 ca3f2d50777c92f5c92c59a490d9206e 88 Pfam PF12833 Helix-turn-helix domain 2 68 4.9E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_06081 ca3f2d50777c92f5c92c59a490d9206e 88 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 21 63 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Y11_06081 ca3f2d50777c92f5c92c59a490d9206e 88 Gene3D G3DSA:1.10.10.60 1 20 6.8E-6 T 13-10-2018 Y11_06081 ca3f2d50777c92f5c92c59a490d9206e 88 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 51 67 8.8E-8 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_06081 ca3f2d50777c92f5c92c59a490d9206e 88 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 36 51 8.8E-8 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_06081 ca3f2d50777c92f5c92c59a490d9206e 88 SMART SM00342 1 67 1.9E-13 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_06081 ca3f2d50777c92f5c92c59a490d9206e 88 Gene3D G3DSA:1.10.10.60 21 79 4.5E-17 T 13-10-2018 Y11_06081 ca3f2d50777c92f5c92c59a490d9206e 88 SUPERFAMILY SSF46689 20 70 2.11E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_35211 da18f3f52789cec2f42892ccb96e70d9 403 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 171 397 5.3E-17 T 13-10-2018 IPR032034 Yop protein translocation protein D, periplasmic domain Y11_35211 da18f3f52789cec2f42892ccb96e70d9 403 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 5 401 3.3E-89 T 13-10-2018 IPR012843 Type III secretion system YscD/HrpQ Y11_27771 a101c2af61bd834d2adfa1e275df6919 471 Gene3D G3DSA:3.30.70.260 331 405 1.4E-50 T 13-10-2018 Y11_27771 a101c2af61bd834d2adfa1e275df6919 471 SUPERFAMILY SSF53633 26 314 3.4E-73 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Y11_27771 a101c2af61bd834d2adfa1e275df6919 471 Gene3D G3DSA:3.40.1160.10 28 311 6.6E-101 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Y11_27771 a101c2af61bd834d2adfa1e275df6919 471 Pfam PF00696 Amino acid kinase family 26 299 2.5E-45 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Y11_27771 a101c2af61bd834d2adfa1e275df6919 471 Gene3D G3DSA:3.30.70.260 325 469 1.4E-50 T 13-10-2018 Y11_27771 a101c2af61bd834d2adfa1e275df6919 471 PIRSF PIRSF000726 24 471 2.5E-150 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Y11_27771 a101c2af61bd834d2adfa1e275df6919 471 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 25 471 2.3E-129 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Y11_27771 a101c2af61bd834d2adfa1e275df6919 471 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 25 471 4.9E-140 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Y11_27771 a101c2af61bd834d2adfa1e275df6919 471 SUPERFAMILY SSF55021 399 470 8.01E-15 T 13-10-2018 Y11_27771 a101c2af61bd834d2adfa1e275df6919 471 Gene3D G3DSA:1.20.120.1320 64 156 6.6E-101 T 13-10-2018 Y11_27771 a101c2af61bd834d2adfa1e275df6919 471 ProSitePatterns PS00324 Aspartokinase signature. 28 36 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Y11_27771 a101c2af61bd834d2adfa1e275df6919 471 SUPERFAMILY SSF55021 318 415 5.89E-17 T 13-10-2018 Y11_03601 9465052b6d5a7e2b4e1b3ed7d26551ff 562 Pfam PF02080 TrkA-C domain 305 372 1.5E-9 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Y11_03601 9465052b6d5a7e2b4e1b3ed7d26551ff 562 Pfam PF02080 TrkA-C domain 227 278 5.8E-9 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Y11_03601 9465052b6d5a7e2b4e1b3ed7d26551ff 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 2.6E-39 T 13-10-2018 IPR006512 YidE/YbjL duplication Y11_03601 9465052b6d5a7e2b4e1b3ed7d26551ff 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 390 541 2.2E-46 T 13-10-2018 IPR006512 YidE/YbjL duplication Y11_03601 9465052b6d5a7e2b4e1b3ed7d26551ff 562 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 59.032 T 13-10-2018 IPR023017 Transport protein YbjL, putative Y11_03601 9465052b6d5a7e2b4e1b3ed7d26551ff 562 SUPERFAMILY SSF116726 227 282 1.7E-10 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_03601 9465052b6d5a7e2b4e1b3ed7d26551ff 562 Gene3D G3DSA:3.30.70.1450 299 373 6.4E-7 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_03601 9465052b6d5a7e2b4e1b3ed7d26551ff 562 Pfam PF06826 Predicted Permease Membrane Region 385 554 1.9E-41 T 13-10-2018 IPR006512 YidE/YbjL duplication Y11_03601 9465052b6d5a7e2b4e1b3ed7d26551ff 562 Pfam PF06826 Predicted Permease Membrane Region 17 182 4.3E-40 T 13-10-2018 IPR006512 YidE/YbjL duplication Y11_03601 9465052b6d5a7e2b4e1b3ed7d26551ff 562 SUPERFAMILY SSF116726 291 374 5.23E-11 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_03601 9465052b6d5a7e2b4e1b3ed7d26551ff 562 Gene3D G3DSA:3.30.70.1450 223 285 2.0E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Y11_25061 7ca7d943a1d82ac6d7f42e62b2c795b1 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 1.0E-125 T 13-10-2018 IPR017861 Kae1/TsaD family Y11_25061 7ca7d943a1d82ac6d7f42e62b2c795b1 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 13-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 Y11_25061 7ca7d943a1d82ac6d7f42e62b2c795b1 337 SUPERFAMILY SSF53067 1 309 2.59E-43 T 13-10-2018 Y11_25061 7ca7d943a1d82ac6d7f42e62b2c795b1 337 Pfam PF00814 Glycoprotease family 24 307 1.8E-102 T 13-10-2018 IPR000905 Gcp-like domain Y11_25061 7ca7d943a1d82ac6d7f42e62b2c795b1 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 7.9E-135 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Y11_25061 7ca7d943a1d82ac6d7f42e62b2c795b1 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.3E-52 T 13-10-2018 IPR017861 Kae1/TsaD family Y11_25061 7ca7d943a1d82ac6d7f42e62b2c795b1 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.3E-52 T 13-10-2018 IPR017861 Kae1/TsaD family Y11_25061 7ca7d943a1d82ac6d7f42e62b2c795b1 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.3E-52 T 13-10-2018 IPR017861 Kae1/TsaD family Y11_25061 7ca7d943a1d82ac6d7f42e62b2c795b1 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.3E-52 T 13-10-2018 IPR017861 Kae1/TsaD family Y11_25061 7ca7d943a1d82ac6d7f42e62b2c795b1 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.3E-52 T 13-10-2018 IPR017861 Kae1/TsaD family Y11_25061 7ca7d943a1d82ac6d7f42e62b2c795b1 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.3E-52 T 13-10-2018 IPR017861 Kae1/TsaD family Y11_25061 7ca7d943a1d82ac6d7f42e62b2c795b1 337 Gene3D G3DSA:3.30.420.40 3 315 2.7E-132 T 13-10-2018 Y11_25061 7ca7d943a1d82ac6d7f42e62b2c795b1 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.353 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Y11_25061 7ca7d943a1d82ac6d7f42e62b2c795b1 337 Gene3D G3DSA:3.30.420.40 129 293 2.7E-132 T 13-10-2018 Y11_03061 12a65c6d5cc03866ec88f38c314e6e78 602 PIRSF PIRSF002741 6 593 4.2E-146 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Y11_03061 12a65c6d5cc03866ec88f38c314e6e78 602 Gene3D G3DSA:3.40.190.10 29 588 5.5E-224 T 13-10-2018 Y11_03061 12a65c6d5cc03866ec88f38c314e6e78 602 SUPERFAMILY SSF53850 50 591 7.69E-113 T 13-10-2018 Y11_03061 12a65c6d5cc03866ec88f38c314e6e78 602 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 99 503 3.9E-73 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain Y11_03061 12a65c6d5cc03866ec88f38c314e6e78 602 Gene3D G3DSA:3.10.105.10 310 568 5.5E-224 T 13-10-2018 Y11_19431 c7a30e2c83248ecd7d55ccc7d030ba09 491 SUPERFAMILY SSF50475 4 314 2.79E-75 T 13-10-2018 Y11_19431 c7a30e2c83248ecd7d55ccc7d030ba09 491 Hamap MF_01983 UbiD-like decarboxylase. 2 489 38.953 T 13-10-2018 IPR032903 UbiD-like decarboxylase/ferulic acid decarboxylase 1 Y11_19431 c7a30e2c83248ecd7d55ccc7d030ba09 491 SUPERFAMILY SSF143968 316 483 1.44E-26 T 13-10-2018 Y11_19431 c7a30e2c83248ecd7d55ccc7d030ba09 491 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 7 455 1.3E-75 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Y11_19431 c7a30e2c83248ecd7d55ccc7d030ba09 491 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 12 422 8.5E-93 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Y11_19431 c7a30e2c83248ecd7d55ccc7d030ba09 491 Gene3D G3DSA:3.40.1670.10 330 457 2.8E-34 T 13-10-2018 Y11_38031 cae149c7b9747142da0ebfa4d7208f9c 272 SUPERFAMILY SSF51556 11 265 2.76E-72 T 13-10-2018 IPR032466 Metal-dependent hydrolase Y11_38031 cae149c7b9747142da0ebfa4d7208f9c 272 Pfam PF01026 TatD related DNase 12 263 1.0E-65 T 13-10-2018 IPR001130 TatD family GO:0016788 Y11_38031 cae149c7b9747142da0ebfa4d7208f9c 272 PIRSF PIRSF005902 2 267 2.1E-68 T 13-10-2018 IPR001130 TatD family GO:0016788 Y11_38031 cae149c7b9747142da0ebfa4d7208f9c 272 Gene3D G3DSA:3.20.20.140 8 265 1.6E-83 T 13-10-2018 Y11_38031 cae149c7b9747142da0ebfa4d7208f9c 272 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 11 19 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Y11_19301 e4ee3dd22a9aa391fe471426d4b31827 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.048 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Y11_19301 e4ee3dd22a9aa391fe471426d4b31827 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 27 73 7.0E-7 T 13-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Y11_19301 e4ee3dd22a9aa391fe471426d4b31827 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 3.1E-159 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Y11_19301 e4ee3dd22a9aa391fe471426d4b31827 321 Pfam PF04055 Radical SAM superfamily 91 251 3.2E-15 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_19301 e4ee3dd22a9aa391fe471426d4b31827 321 PIRSF PIRSF005963 2 320 3.7E-130 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Y11_19301 e4ee3dd22a9aa391fe471426d4b31827 321 SMART SM00729 84 293 3.0E-16 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Y11_19301 e4ee3dd22a9aa391fe471426d4b31827 321 SUPERFAMILY SSF102114 53 316 3.66E-66 T 13-10-2018 Y11_19301 e4ee3dd22a9aa391fe471426d4b31827 321 Gene3D G3DSA:3.20.20.70 82 294 7.4E-20 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_16051 c1500cd70ce19af3bcb59d7c647cdef5 263 Gene3D G3DSA:3.30.950.10 124 243 1.7E-47 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Y11_16051 c1500cd70ce19af3bcb59d7c647cdef5 263 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 19 33 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_16051 c1500cd70ce19af3bcb59d7c647cdef5 263 Gene3D G3DSA:3.40.1010.10 11 123 3.0E-28 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Y11_16051 c1500cd70ce19af3bcb59d7c647cdef5 263 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 16 261 2.6E-97 T 13-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 Y11_16051 c1500cd70ce19af3bcb59d7c647cdef5 263 SUPERFAMILY SSF53790 11 261 2.62E-66 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Y11_16051 c1500cd70ce19af3bcb59d7c647cdef5 263 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 221 2.7E-42 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Y11_35641 c4297163e20f6eb47fc6359f89c25119 710 SUPERFAMILY SSF56935 54 710 1.78E-134 T 13-10-2018 Y11_35641 c4297163e20f6eb47fc6359f89c25119 710 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 693 710 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site Y11_35641 c4297163e20f6eb47fc6359f89c25119 710 Gene3D G3DSA:2.170.130.10 40 177 1.6E-35 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Y11_35641 c4297163e20f6eb47fc6359f89c25119 710 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 168 1.0E-22 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Y11_35641 c4297163e20f6eb47fc6359f89c25119 710 Gene3D G3DSA:2.40.170.20 178 710 5.2E-120 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Y11_35641 c4297163e20f6eb47fc6359f89c25119 710 Pfam PF00593 TonB dependent receptor 258 708 7.9E-54 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Y11_35641 c4297163e20f6eb47fc6359f89c25119 710 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 710 4.6E-184 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 Y11_28361 5f73daac710bb5c2354cc64f9ae0e321 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 60.911 T 13-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_28361 5f73daac710bb5c2354cc64f9ae0e321 255 Gene3D G3DSA:3.20.20.70 1 255 2.3E-102 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_28361 5f73daac710bb5c2354cc64f9ae0e321 255 SUPERFAMILY SSF51351 1 250 1.09E-90 T 13-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_28361 5f73daac710bb5c2354cc64f9ae0e321 255 Pfam PF00121 Triosephosphate isomerase 5 246 1.4E-92 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_28361 5f73daac710bb5c2354cc64f9ae0e321 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 1.3E-96 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_28361 5f73daac710bb5c2354cc64f9ae0e321 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 13-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_30361 ccdd83267bc2f22827fb87282181d57d 387 SUPERFAMILY SSF48179 204 384 2.31E-46 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_30361 ccdd83267bc2f22827fb87282181d57d 387 SUPERFAMILY SSF51735 1 203 9.8E-47 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_30361 ccdd83267bc2f22827fb87282181d57d 387 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 1.5E-24 T 13-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 Y11_30361 ccdd83267bc2f22827fb87282181d57d 387 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 1.3E-16 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Y11_30361 ccdd83267bc2f22827fb87282181d57d 387 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 1.3E-16 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Y11_30361 ccdd83267bc2f22827fb87282181d57d 387 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 1.3E-16 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Y11_30361 ccdd83267bc2f22827fb87282181d57d 387 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 1.3E-16 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Y11_30361 ccdd83267bc2f22827fb87282181d57d 387 Gene3D G3DSA:3.40.50.720 1 205 2.1E-82 T 13-10-2018 Y11_30361 ccdd83267bc2f22827fb87282181d57d 387 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 40.71 T 13-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Y11_30361 ccdd83267bc2f22827fb87282181d57d 387 Gene3D G3DSA:1.10.1040.10 207 382 2.3E-70 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Y11_30361 ccdd83267bc2f22827fb87282181d57d 387 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 148 372 3.3E-65 T 13-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 Y11_30361 ccdd83267bc2f22827fb87282181d57d 387 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 13-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Y11_32821 8fe87bc8d61e31dd523adc4cb6199cb6 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 13-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32821 8fe87bc8d61e31dd523adc4cb6199cb6 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.6E-65 T 13-10-2018 IPR023798 Ribosomal protein S7 domain Y11_32821 8fe87bc8d61e31dd523adc4cb6199cb6 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.144 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Y11_32821 8fe87bc8d61e31dd523adc4cb6199cb6 156 Gene3D G3DSA:1.10.455.10 2 155 5.6E-64 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Y11_32821 8fe87bc8d61e31dd523adc4cb6199cb6 156 SUPERFAMILY SSF47973 6 149 7.59E-60 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Y11_32821 8fe87bc8d61e31dd523adc4cb6199cb6 156 PIRSF PIRSF002122 3 156 2.3E-63 T 13-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Y11_32821 8fe87bc8d61e31dd523adc4cb6199cb6 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.4E-71 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Y11_08311 84ad1ddaaefbc0698aa46f5298119a14 341 SUPERFAMILY SSF53822 60 340 3.73E-95 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_08311 84ad1ddaaefbc0698aa46f5298119a14 341 SUPERFAMILY SSF47413 1 59 2.25E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_08311 84ad1ddaaefbc0698aa46f5298119a14 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 1.7E-41 T 13-10-2018 Y11_08311 84ad1ddaaefbc0698aa46f5298119a14 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 Y11_08311 84ad1ddaaefbc0698aa46f5298119a14 341 Gene3D G3DSA:3.40.50.2300 162 324 6.4E-101 T 13-10-2018 Y11_08311 84ad1ddaaefbc0698aa46f5298119a14 341 Gene3D G3DSA:3.40.50.2300 69 323 6.4E-101 T 13-10-2018 Y11_08311 84ad1ddaaefbc0698aa46f5298119a14 341 Gene3D G3DSA:1.10.260.40 3 59 4.2E-25 T 13-10-2018 Y11_08311 84ad1ddaaefbc0698aa46f5298119a14 341 SMART SM00354 1 71 2.0E-36 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_08311 84ad1ddaaefbc0698aa46f5298119a14 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 63.452 T 13-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 Y11_08311 84ad1ddaaefbc0698aa46f5298119a14 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.6E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_08311 84ad1ddaaefbc0698aa46f5298119a14 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.6E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_08311 84ad1ddaaefbc0698aa46f5298119a14 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.8E-18 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_13791 ef4569c6547675adfcd9a2f5599d3237 160 SUPERFAMILY SSF47413 5 65 3.07E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_13791 ef4569c6547675adfcd9a2f5599d3237 160 Pfam PF01381 Helix-turn-helix 6 59 2.2E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_13791 ef4569c6547675adfcd9a2f5599d3237 160 Pfam PF13239 2TM domain 82 157 1.3E-10 T 13-10-2018 IPR025698 2TM domain Y11_13791 ef4569c6547675adfcd9a2f5599d3237 160 SMART SM00530 5 59 2.5E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_13791 ef4569c6547675adfcd9a2f5599d3237 160 Gene3D G3DSA:1.10.260.40 3 66 4.1E-16 T 13-10-2018 Y11_09091 456cf89857182b4f2bbda53dd1aa967a 317 SUPERFAMILY SSF159871 5 94 2.49E-22 T 13-10-2018 IPR036275 YdgH-like superfamily Y11_09091 456cf89857182b4f2bbda53dd1aa967a 317 SUPERFAMILY SSF159871 109 179 6.28E-18 T 13-10-2018 IPR036275 YdgH-like superfamily Y11_09091 456cf89857182b4f2bbda53dd1aa967a 317 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 5.0E-20 T 13-10-2018 IPR010854 Domain of unknown function DUF1471 Y11_09091 456cf89857182b4f2bbda53dd1aa967a 317 Pfam PF07338 Protein of unknown function (DUF1471) 261 317 3.4E-20 T 13-10-2018 IPR010854 Domain of unknown function DUF1471 Y11_09091 456cf89857182b4f2bbda53dd1aa967a 317 Pfam PF07338 Protein of unknown function (DUF1471) 120 176 1.5E-19 T 13-10-2018 IPR010854 Domain of unknown function DUF1471 Y11_09091 456cf89857182b4f2bbda53dd1aa967a 317 Gene3D G3DSA:3.30.1660.10 22 91 9.8E-26 T 13-10-2018 IPR025543 Dodecin-like Y11_09091 456cf89857182b4f2bbda53dd1aa967a 317 SUPERFAMILY SSF159871 241 317 1.26E-18 T 13-10-2018 IPR036275 YdgH-like superfamily Y11_09091 456cf89857182b4f2bbda53dd1aa967a 317 PIRSF PIRSF014774 1 317 5.4E-185 T 13-10-2018 IPR025539 YdgH protein Y11_09091 456cf89857182b4f2bbda53dd1aa967a 317 Gene3D G3DSA:3.30.1660.10 245 317 1.5E-29 T 13-10-2018 IPR025543 Dodecin-like Y11_09091 456cf89857182b4f2bbda53dd1aa967a 317 Gene3D G3DSA:3.30.1660.10 107 176 1.1E-23 T 13-10-2018 IPR025543 Dodecin-like Y11_26081 2b3431c45cc0bb82138c7781a84b619d 180 SUPERFAMILY SSF49401 27 180 4.23E-23 T 13-10-2018 IPR008966 Adhesion domain superfamily Y11_26081 2b3431c45cc0bb82138c7781a84b619d 180 Gene3D G3DSA:2.60.40.1090 27 179 4.1E-27 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Y11_26081 2b3431c45cc0bb82138c7781a84b619d 180 Pfam PF16970 Type-1 fimbrial protein, A 54 180 6.3E-15 T 13-10-2018 IPR039458 Type-1 fimbrial protein, A Y11_10851 fd54b12370b09f7148c33f7a44bb869f 571 Gene3D G3DSA:3.30.750.24 436 563 2.9E-19 T 13-10-2018 IPR036513 STAS domain superfamily Y11_10851 fd54b12370b09f7148c33f7a44bb869f 571 Pfam PF01740 STAS domain 447 532 5.1E-11 T 13-10-2018 IPR002645 STAS domain Y11_10851 fd54b12370b09f7148c33f7a44bb869f 571 SUPERFAMILY SSF52091 444 537 4.91E-9 T 13-10-2018 IPR036513 STAS domain superfamily Y11_10851 fd54b12370b09f7148c33f7a44bb869f 571 Pfam PF00916 Sulfate permease family 24 387 7.0E-88 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Y11_08001 c7dc3bd02269b4d725bbb9de1f663983 677 PIRSF PIRSF036506 1 659 0.0 T 13-10-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00520+2.1.2.13+1.1.1.305 Y11_08001 c7dc3bd02269b4d725bbb9de1f663983 677 Pfam PF00551 Formyl transferase 25 173 2.6E-24 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Y11_08001 c7dc3bd02269b4d725bbb9de1f663983 677 Pfam PF02911 Formyl transferase, C-terminal domain 203 287 5.1E-17 T 13-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Y11_08001 c7dc3bd02269b4d725bbb9de1f663983 677 SUPERFAMILY SSF51735 317 650 1.69E-70 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_08001 c7dc3bd02269b4d725bbb9de1f663983 677 SUPERFAMILY SSF53328 1 202 4.58E-56 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Y11_08001 c7dc3bd02269b4d725bbb9de1f663983 677 SUPERFAMILY SSF50486 204 304 8.48E-25 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Y11_08001 c7dc3bd02269b4d725bbb9de1f663983 677 Gene3D G3DSA:3.40.50.720 314 658 1.4E-124 T 13-10-2018 Y11_08001 c7dc3bd02269b4d725bbb9de1f663983 677 Gene3D G3DSA:3.40.50.12230 1 304 1.0E-105 T 13-10-2018 Y11_08001 c7dc3bd02269b4d725bbb9de1f663983 677 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 63.833 T 13-10-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00520+2.1.2.13+1.1.1.305 Y11_08001 c7dc3bd02269b4d725bbb9de1f663983 677 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 2.5E-43 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 Pfam PF10135 Rod binding protein 56 102 2.1E-16 T 13-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 18 302 1.1E-109 T 13-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 SMART SM00047 149 313 2.9E-47 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 Gene3D G3DSA:2.10.70.40 193 245 8.7E-46 T 13-10-2018 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 Gene3D G3DSA:1.10.530.10 159 299 8.7E-46 T 13-10-2018 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 168 302 2.3E-20 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 PRINTS PR01002 Flagellar protein FlgJ signature 34 57 2.4E-103 T 13-10-2018 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 PRINTS PR01002 Flagellar protein FlgJ signature 242 263 2.4E-103 T 13-10-2018 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 PRINTS PR01002 Flagellar protein FlgJ signature 178 196 2.4E-103 T 13-10-2018 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 PRINTS PR01002 Flagellar protein FlgJ signature 198 219 2.4E-103 T 13-10-2018 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 PRINTS PR01002 Flagellar protein FlgJ signature 12 32 2.4E-103 T 13-10-2018 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 PRINTS PR01002 Flagellar protein FlgJ signature 59 79 2.4E-103 T 13-10-2018 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 PRINTS PR01002 Flagellar protein FlgJ signature 154 177 2.4E-103 T 13-10-2018 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 PRINTS PR01002 Flagellar protein FlgJ signature 220 241 2.4E-103 T 13-10-2018 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 PRINTS PR01002 Flagellar protein FlgJ signature 117 142 2.4E-103 T 13-10-2018 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 PRINTS PR01002 Flagellar protein FlgJ signature 264 283 2.4E-103 T 13-10-2018 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 PRINTS PR01002 Flagellar protein FlgJ signature 302 319 2.4E-103 T 13-10-2018 Y11_14361 b3d2399eebbfc022ab18983d21fb5682 320 PRINTS PR01002 Flagellar protein FlgJ signature 284 302 2.4E-103 T 13-10-2018 Y11_33571 2877bbe7ad9cdd91231202d591fcf9b4 895 SUPERFAMILY SSF141729 70 200 5.49E-22 T 13-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 Y11_33571 2877bbe7ad9cdd91231202d591fcf9b4 895 Pfam PF00577 Outer membrane usher protein 231 805 1.2E-148 T 13-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 Y11_33571 2877bbe7ad9cdd91231202d591fcf9b4 895 Gene3D G3DSA:2.60.40.3110 302 391 6.5E-35 T 13-10-2018 Y11_33571 2877bbe7ad9cdd91231202d591fcf9b4 895 Pfam PF13953 PapC C-terminal domain 814 877 4.4E-17 T 13-10-2018 IPR025949 PapC-like, C-terminal domain Y11_33571 2877bbe7ad9cdd91231202d591fcf9b4 895 Gene3D G3DSA:3.10.20.410 45 189 2.5E-20 T 13-10-2018 Y11_33571 2877bbe7ad9cdd91231202d591fcf9b4 895 Gene3D G3DSA:2.60.40.2070 812 895 1.2E-17 T 13-10-2018 Y11_33571 2877bbe7ad9cdd91231202d591fcf9b4 895 Pfam PF13954 PapC N-terminal domain 47 211 9.9E-34 T 13-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 Y11_33571 2877bbe7ad9cdd91231202d591fcf9b4 895 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 344 354 - T 13-10-2018 IPR018030 Fimbrial membrane usher, conserved site Y11_33571 2877bbe7ad9cdd91231202d591fcf9b4 895 Gene3D G3DSA:2.60.40.2610 720 810 2.2E-30 T 13-10-2018 Y11_40291 bb21ec76290a59f26574bd695fc5761e 251 SUPERFAMILY SSF53056 42 250 6.41E-52 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Y11_40291 bb21ec76290a59f26574bd695fc5761e 251 Pfam PF00484 Carbonic anhydrase 98 247 2.0E-34 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Y11_40291 bb21ec76290a59f26574bd695fc5761e 251 SMART SM00947 91 251 5.2E-42 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Y11_40291 bb21ec76290a59f26574bd695fc5761e 251 Gene3D G3DSA:3.40.1050.10 47 251 2.9E-55 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 PIRSF PIRSF006485 1 470 1.4E-177 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 Gene3D G3DSA:3.30.300.20 382 464 1.5E-19 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.8E-9 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 3.8E-9 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 SUPERFAMILY SSF52540 204 468 3.79E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 Hamap MF_00195 GTPase Der [der]. 2 465 38.664 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 Gene3D G3DSA:3.40.50.300 2 160 1.6E-42 T 13-10-2018 Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 SMART SM00382 1 174 3.4 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 SMART SM00382 205 352 0.35 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 382 462 2.6E-25 T 13-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 Gene3D G3DSA:3.40.50.300 205 378 1.9E-47 T 13-10-2018 Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 Pfam PF01926 50S ribosome-binding GTPase 5 119 6.4E-27 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 Pfam PF01926 50S ribosome-binding GTPase 209 326 7.4E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 207 370 3.9E-21 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 153 2.2E-20 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 462 3.1E-177 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Y11_42971 7afcbb0161585911b2aca983ff12a9c0 494 SUPERFAMILY SSF52540 4 175 4.15E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_08821 5bb434440b5526e3bed9c18934c1666b 538 Gene3D G3DSA:3.90.76.10 67 190 7.0E-189 T 13-10-2018 Y11_08821 5bb434440b5526e3bed9c18934c1666b 538 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 83 104 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site Y11_08821 5bb434440b5526e3bed9c18934c1666b 538 PIRSF PIRSF002741 3 537 1.6E-110 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Y11_08821 5bb434440b5526e3bed9c18934c1666b 538 SUPERFAMILY SSF53850 32 529 1.63E-140 T 13-10-2018 Y11_08821 5bb434440b5526e3bed9c18934c1666b 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 454 4.0E-86 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain Y11_08821 5bb434440b5526e3bed9c18934c1666b 538 Gene3D G3DSA:3.40.190.10 41 519 7.0E-189 T 13-10-2018 Y11_08821 5bb434440b5526e3bed9c18934c1666b 538 Gene3D G3DSA:3.10.105.10 292 507 7.0E-189 T 13-10-2018 Y11_24291 36e36347a55aed1223bc556be5f2d76f 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 257 1.1E-24 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Y11_24291 36e36347a55aed1223bc556be5f2d76f 261 Pfam PF00460 Flagella basal body rod protein 5 35 5.3E-12 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Y11_24291 36e36347a55aed1223bc556be5f2d76f 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Y11_24291 36e36347a55aed1223bc556be5f2d76f 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 1.7E-107 T 13-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 Y11_24291 36e36347a55aed1223bc556be5f2d76f 261 SUPERFAMILY SSF117143 92 222 1.7E-35 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Y11_24291 36e36347a55aed1223bc556be5f2d76f 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 144 243 3.6E-33 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Y11_24291 36e36347a55aed1223bc556be5f2d76f 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 3.3E-43 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Y11_28811 a1debd9bb86d9293327aa6d202f7bd32 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 512 5.2E-239 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_28811 a1debd9bb86d9293327aa6d202f7bd32 515 Gene3D G3DSA:3.40.720.10 7 511 4.7E-215 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Y11_28811 a1debd9bb86d9293327aa6d202f7bd32 515 SUPERFAMILY SSF53649 5 511 1.15E-73 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Y11_28811 a1debd9bb86d9293327aa6d202f7bd32 515 Gene3D G3DSA:3.40.1450.10 79 313 4.7E-215 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_28811 a1debd9bb86d9293327aa6d202f7bd32 515 Pfam PF01676 Metalloenzyme superfamily 6 501 6.7E-82 T 13-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Y11_28811 a1debd9bb86d9293327aa6d202f7bd32 515 PIRSF PIRSF001492 1 515 5.6E-204 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_28811 a1debd9bb86d9293327aa6d202f7bd32 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 513 49.902 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_28811 a1debd9bb86d9293327aa6d202f7bd32 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 85 300 5.6E-82 T 13-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_28811 a1debd9bb86d9293327aa6d202f7bd32 515 SUPERFAMILY SSF64158 79 311 8.76E-86 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Y11_39081 79b3cf793117b2debc65453c35b24b82 285 Pfam PF08478 POTRA domain, FtsQ-type 57 126 3.0E-22 T 13-10-2018 IPR013685 POTRA domain, FtsQ-type Y11_39081 79b3cf793117b2debc65453c35b24b82 285 Pfam PF03799 Cell division protein FtsQ 130 244 3.4E-26 T 13-10-2018 IPR005548 Cell division protein FtsQ/DivIB Y11_39081 79b3cf793117b2debc65453c35b24b82 285 Gene3D G3DSA:3.40.50.11690 127 259 3.4E-50 T 13-10-2018 Y11_39081 79b3cf793117b2debc65453c35b24b82 285 Gene3D G3DSA:3.10.20.310 58 126 1.9E-33 T 13-10-2018 Y11_39081 79b3cf793117b2debc65453c35b24b82 285 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 26 252 24.716 T 13-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 Y11_05811 53a6ab0406fa456ffb8d9822df863d75 331 SMART SM00354 1 73 2.2E-22 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_05811 53a6ab0406fa456ffb8d9822df863d75 331 Gene3D G3DSA:3.40.50.2300 72 310 1.9E-44 T 13-10-2018 Y11_05811 53a6ab0406fa456ffb8d9822df863d75 331 SUPERFAMILY SSF47413 1 59 3.13E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_05811 53a6ab0406fa456ffb8d9822df863d75 331 Gene3D G3DSA:3.40.50.2300 161 295 1.9E-44 T 13-10-2018 Y11_05811 53a6ab0406fa456ffb8d9822df863d75 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 Y11_05811 53a6ab0406fa456ffb8d9822df863d75 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 324 1.2E-52 T 13-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain Y11_05811 53a6ab0406fa456ffb8d9822df863d75 331 Gene3D G3DSA:1.10.260.40 1 58 8.0E-19 T 13-10-2018 Y11_05811 53a6ab0406fa456ffb8d9822df863d75 331 SUPERFAMILY SSF53822 69 331 7.97E-41 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_05811 53a6ab0406fa456ffb8d9822df863d75 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.3E-16 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_32031 e690ab3e8c66193b445447b3d92c41a0 87 Pfam PF07338 Protein of unknown function (DUF1471) 34 87 5.6E-21 T 13-10-2018 IPR010854 Domain of unknown function DUF1471 Y11_32031 e690ab3e8c66193b445447b3d92c41a0 87 Gene3D G3DSA:3.30.1660.10 21 87 3.5E-24 T 13-10-2018 IPR025543 Dodecin-like Y11_32031 e690ab3e8c66193b445447b3d92c41a0 87 SUPERFAMILY SSF159871 5 87 1.7E-24 T 13-10-2018 IPR036275 YdgH-like superfamily Y11_04271 b52c9cf5b8ce2ddc34217658255fd5d9 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.3E-30 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_04271 b52c9cf5b8ce2ddc34217658255fd5d9 69 Gene3D G3DSA:2.40.50.140 1 68 6.6E-30 T 13-10-2018 Y11_04271 b52c9cf5b8ce2ddc34217658255fd5d9 69 PRINTS PR00050 Cold shock protein signature 42 60 9.0E-16 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_04271 b52c9cf5b8ce2ddc34217658255fd5d9 69 PRINTS PR00050 Cold shock protein signature 27 36 9.0E-16 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_04271 b52c9cf5b8ce2ddc34217658255fd5d9 69 PRINTS PR00050 Cold shock protein signature 6 21 9.0E-16 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_04271 b52c9cf5b8ce2ddc34217658255fd5d9 69 SMART SM00357 5 69 4.8E-28 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Y11_04271 b52c9cf5b8ce2ddc34217658255fd5d9 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 13-10-2018 IPR019844 Cold-shock conserved site Y11_04271 b52c9cf5b8ce2ddc34217658255fd5d9 69 SUPERFAMILY SSF50249 4 68 1.1E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_04271 b52c9cf5b8ce2ddc34217658255fd5d9 69 PIRSF PIRSF002599 1 69 3.1E-24 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 Y11_23751 a797725804c7f1de405150cefe481dbf 321 SUPERFAMILY SSF46785 2 73 1.33E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_23751 a797725804c7f1de405150cefe481dbf 321 Pfam PF00891 O-methyltransferase 92 299 7.0E-36 T 13-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 Y11_23751 a797725804c7f1de405150cefe481dbf 321 PIRSF PIRSF005739 1 321 3.6E-42 T 13-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 Y11_23751 a797725804c7f1de405150cefe481dbf 321 Gene3D G3DSA:1.10.10.10 1 80 3.7E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_23751 a797725804c7f1de405150cefe481dbf 321 Gene3D G3DSA:3.40.50.150 81 321 3.4E-62 T 13-10-2018 Y11_23751 a797725804c7f1de405150cefe481dbf 321 SUPERFAMILY SSF53335 78 318 7.77E-40 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_22891 7de803a550dc65565f49af34dcd74ff7 135 Gene3D G3DSA:3.30.160.250 1 86 3.6E-20 T 13-10-2018 Y11_22891 7de803a550dc65565f49af34dcd74ff7 135 Gene3D G3DSA:1.10.1220.10 101 135 9.2E-6 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Y11_22891 7de803a550dc65565f49af34dcd74ff7 135 SUPERFAMILY SSF143100 1 59 3.4E-14 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like Y11_22891 7de803a550dc65565f49af34dcd74ff7 135 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 129 2.4E-29 T 13-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system Y11_19701 de688dae55bdb64b6c8f48eb55534555 174 Gene3D G3DSA:3.40.50.7700 1 174 4.4E-77 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Y11_19701 de688dae55bdb64b6c8f48eb55534555 174 PIRSF PIRSF001338 11 173 1.1E-65 T 13-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Y11_19701 de688dae55bdb64b6c8f48eb55534555 174 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 15 168 31.949 T 13-10-2018 IPR033747 Class I PurE Y11_19701 de688dae55bdb64b6c8f48eb55534555 174 SUPERFAMILY SSF52255 14 170 2.75E-65 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Y11_19701 de688dae55bdb64b6c8f48eb55534555 174 Pfam PF00731 AIR carboxylase 14 162 1.4E-62 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Y11_19701 de688dae55bdb64b6c8f48eb55534555 174 SMART SM01001 13 164 9.8E-100 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Y11_19701 de688dae55bdb64b6c8f48eb55534555 174 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 15 169 1.8E-64 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Y11_41031 4ab185c05d4976b01fb8c6a6ec594352 285 Gene3D G3DSA:1.10.8.10 1 56 1.7E-25 T 13-10-2018 Y11_41031 4ab185c05d4976b01fb8c6a6ec594352 285 SUPERFAMILY SSF46934 4 55 4.01E-18 T 13-10-2018 IPR009060 UBA-like superfamily GO:0005515 Y11_41031 4ab185c05d4976b01fb8c6a6ec594352 285 Hamap MF_00050 Elongation factor Ts [tsf]. 1 282 79.833 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Y11_41031 4ab185c05d4976b01fb8c6a6ec594352 285 Gene3D G3DSA:3.30.479.20 57 143 3.9E-30 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Y11_41031 4ab185c05d4976b01fb8c6a6ec594352 285 Pfam PF00889 Elongation factor TS 73 265 2.7E-67 T 13-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Y11_41031 4ab185c05d4976b01fb8c6a6ec594352 285 Gene3D G3DSA:1.10.286.20 189 228 5.6E-23 T 13-10-2018 Y11_41031 4ab185c05d4976b01fb8c6a6ec594352 285 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Y11_41031 4ab185c05d4976b01fb8c6a6ec594352 285 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 284 1.2E-115 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Y11_41031 4ab185c05d4976b01fb8c6a6ec594352 285 SUPERFAMILY SSF54713 144 283 3.79E-53 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Y11_41031 4ab185c05d4976b01fb8c6a6ec594352 285 SUPERFAMILY SSF54713 56 141 2.83E-21 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Y11_08701 b1089511d11c45bd956e98434482243f 336 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y11_08701 b1089511d11c45bd956e98434482243f 336 Pfam PF00158 Sigma-54 interaction domain 9 170 6.8E-60 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Y11_08701 b1089511d11c45bd956e98434482243f 336 Gene3D G3DSA:1.10.10.60 261 332 1.9E-8 T 13-10-2018 Y11_08701 b1089511d11c45bd956e98434482243f 336 SUPERFAMILY SSF52540 8 243 1.61E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_08701 b1089511d11c45bd956e98434482243f 336 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Y11_08701 b1089511d11c45bd956e98434482243f 336 Gene3D G3DSA:3.40.50.300 2 179 1.5E-56 T 13-10-2018 Y11_08701 b1089511d11c45bd956e98434482243f 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 312 332 1.3E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Y11_08701 b1089511d11c45bd956e98434482243f 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 295 312 1.3E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Y11_08701 b1089511d11c45bd956e98434482243f 336 Pfam PF02954 Bacterial regulatory protein, Fis family 292 327 4.4E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Y11_08701 b1089511d11c45bd956e98434482243f 336 Gene3D G3DSA:1.10.8.60 180 260 1.2E-28 T 13-10-2018 Y11_08701 b1089511d11c45bd956e98434482243f 336 SUPERFAMILY SSF46689 222 331 7.17E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_08701 b1089511d11c45bd956e98434482243f 336 SMART SM00382 28 180 1.5E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_08701 b1089511d11c45bd956e98434482243f 336 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 329 7.3E-165 T 13-10-2018 IPR014317 Transcription activator PspF Y11_22471 03663f4035e3ffd97c1ba2770b4236e0 473 SUPERFAMILY SSF46626 179 329 1.05E-45 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Y11_22471 03663f4035e3ffd97c1ba2770b4236e0 473 Pfam PF00034 Cytochrome c 349 465 6.4E-5 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_22471 03663f4035e3ffd97c1ba2770b4236e0 473 Gene3D G3DSA:1.10.760.10 194 341 4.4E-105 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Y11_22471 03663f4035e3ffd97c1ba2770b4236e0 473 SMART SM01235 14 165 5.0E-36 T 13-10-2018 IPR025992 Haem-binding domain Y11_22471 03663f4035e3ffd97c1ba2770b4236e0 473 Pfam PF14376 Haem-binding domain 43 162 7.7E-31 T 13-10-2018 IPR025992 Haem-binding domain Y11_22471 03663f4035e3ffd97c1ba2770b4236e0 473 SUPERFAMILY SSF46626 328 470 2.85E-37 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Y11_22471 03663f4035e3ffd97c1ba2770b4236e0 473 Pfam PF03150 Di-haem cytochrome c peroxidase 194 341 1.0E-49 T 13-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 Y11_22471 03663f4035e3ffd97c1ba2770b4236e0 473 Gene3D G3DSA:1.10.760.10 191 469 4.4E-105 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Y11_26061 cebdab9fe1d550315ce6484a1c942b37 866 Gene3D G3DSA:2.60.40.2070 776 865 2.1E-21 T 13-10-2018 Y11_26061 cebdab9fe1d550315ce6484a1c942b37 866 Pfam PF00577 Outer membrane usher protein 221 768 1.1E-158 T 13-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 Y11_26061 cebdab9fe1d550315ce6484a1c942b37 866 Gene3D G3DSA:2.60.40.3110 288 377 1.7E-36 T 13-10-2018 Y11_26061 cebdab9fe1d550315ce6484a1c942b37 866 SUPERFAMILY SSF141729 56 181 5.75E-31 T 13-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 Y11_26061 cebdab9fe1d550315ce6484a1c942b37 866 Gene3D G3DSA:2.60.40.2610 684 774 2.9E-31 T 13-10-2018 Y11_26061 cebdab9fe1d550315ce6484a1c942b37 866 Pfam PF13954 PapC N-terminal domain 56 204 5.9E-43 T 13-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 Y11_26061 cebdab9fe1d550315ce6484a1c942b37 866 Gene3D G3DSA:3.10.20.410 54 181 5.4E-35 T 13-10-2018 Y11_26061 cebdab9fe1d550315ce6484a1c942b37 866 Pfam PF13953 PapC C-terminal domain 778 843 2.8E-23 T 13-10-2018 IPR025949 PapC-like, C-terminal domain Y11_23331 8c8716bbac0239ee12f4106f35dcef0c 374 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 19 373 6.9E-173 T 13-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 Y11_23331 8c8716bbac0239ee12f4106f35dcef0c 374 SUPERFAMILY SSF55909 17 373 8.74E-138 T 13-10-2018 Y11_23331 8c8716bbac0239ee12f4106f35dcef0c 374 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 27 372 4.4E-120 T 13-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 Y11_23331 8c8716bbac0239ee12f4106f35dcef0c 374 Hamap MF_01841 Agmatine deiminase [aguA]. 18 373 58.989 T 13-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 Y11_23331 8c8716bbac0239ee12f4106f35dcef0c 374 Gene3D G3DSA:3.75.10.10 15 374 5.2E-137 T 13-10-2018 Y11_12141 d96816e231017f4c9a4b2e6d669f81dc 456 Gene3D G3DSA:3.20.20.140 52 445 1.4E-184 T 13-10-2018 Y11_12141 d96816e231017f4c9a4b2e6d669f81dc 456 Gene3D G3DSA:2.30.40.10 9 433 1.4E-184 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_12141 d96816e231017f4c9a4b2e6d669f81dc 456 Pfam PF01979 Amidohydrolase family 48 429 1.6E-34 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Y11_12141 d96816e231017f4c9a4b2e6d669f81dc 456 SUPERFAMILY SSF51338 378 436 6.48E-6 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_12141 d96816e231017f4c9a4b2e6d669f81dc 456 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 453 1.8E-222 T 13-10-2018 IPR010252 Formiminoglutamate deiminase Y11_12141 d96816e231017f4c9a4b2e6d669f81dc 456 SUPERFAMILY SSF51556 50 357 1.23E-72 T 13-10-2018 IPR032466 Metal-dependent hydrolase Y11_17531 c811db2f5147875efb3ff014a9533c78 434 Gene3D G3DSA:3.30.450.20 6 117 3.3E-24 T 13-10-2018 Y11_17531 c811db2f5147875efb3ff014a9533c78 434 Gene3D G3DSA:3.30.450.20 118 239 5.3E-18 T 13-10-2018 Y11_17531 c811db2f5147875efb3ff014a9533c78 434 SMART SM00086 207 249 0.0011 T 13-10-2018 IPR001610 PAC motif Y11_17531 c811db2f5147875efb3ff014a9533c78 434 SMART SM00086 85 127 4.8E-7 T 13-10-2018 IPR001610 PAC motif Y11_17531 c811db2f5147875efb3ff014a9533c78 434 Pfam PF08447 PAS fold 157 243 6.1E-12 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Y11_17531 c811db2f5147875efb3ff014a9533c78 434 Pfam PF08447 PAS fold 36 119 2.3E-15 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Y11_17531 c811db2f5147875efb3ff014a9533c78 434 Gene3D G3DSA:1.10.287.950 240 433 3.5E-38 T 13-10-2018 Y11_17531 c811db2f5147875efb3ff014a9533c78 434 SMART SM00091 132 202 0.61 T 13-10-2018 IPR000014 PAS domain Y11_17531 c811db2f5147875efb3ff014a9533c78 434 SMART SM00091 12 80 0.035 T 13-10-2018 IPR000014 PAS domain Y11_17531 c811db2f5147875efb3ff014a9533c78 434 SUPERFAMILY SSF55785 21 124 1.74E-24 T 13-10-2018 IPR035965 PAS domain superfamily Y11_17531 c811db2f5147875efb3ff014a9533c78 434 SUPERFAMILY SSF55785 142 246 1.74E-21 T 13-10-2018 IPR035965 PAS domain superfamily Y11_17531 c811db2f5147875efb3ff014a9533c78 434 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 267 431 9.4E-33 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_17531 c811db2f5147875efb3ff014a9533c78 434 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 132 8.2E-17 T 13-10-2018 IPR000014 PAS domain Y11_17531 c811db2f5147875efb3ff014a9533c78 434 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 254 2.4E-14 T 13-10-2018 IPR000014 PAS domain Y11_17531 c811db2f5147875efb3ff014a9533c78 434 SUPERFAMILY SSF58104 233 431 2.35E-46 T 13-10-2018 Y11_17531 c811db2f5147875efb3ff014a9533c78 434 SMART SM00283 238 428 1.8E-9 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_17531 c811db2f5147875efb3ff014a9533c78 434 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 318 345 1.7E-14 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_17531 c811db2f5147875efb3ff014a9533c78 434 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 347 376 1.7E-14 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_41021 3c321b109ac281a87c97de4b2918f11e 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Y11_41021 3c321b109ac281a87c97de4b2918f11e 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.1E-109 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_41021 3c321b109ac281a87c97de4b2918f11e 241 SUPERFAMILY SSF52313 6 236 2.88E-97 T 13-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Y11_41021 3c321b109ac281a87c97de4b2918f11e 241 Gene3D G3DSA:3.40.50.10490 8 219 5.5E-94 T 13-10-2018 Y11_41021 3c321b109ac281a87c97de4b2918f11e 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.2E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_41021 3c321b109ac281a87c97de4b2918f11e 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.2E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_41021 3c321b109ac281a87c97de4b2918f11e 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.2E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_41021 3c321b109ac281a87c97de4b2918f11e 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.2E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_41021 3c321b109ac281a87c97de4b2918f11e 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.2E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_41021 3c321b109ac281a87c97de4b2918f11e 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.2E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_41021 3c321b109ac281a87c97de4b2918f11e 241 Gene3D G3DSA:1.10.287.610 103 150 5.5E-94 T 13-10-2018 Y11_41021 3c321b109ac281a87c97de4b2918f11e 241 Pfam PF00318 Ribosomal protein S2 9 224 9.3E-95 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_41021 3c321b109ac281a87c97de4b2918f11e 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.968 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_41021 3c321b109ac281a87c97de4b2918f11e 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Y11_18661 f0d193319379f60f0e05975252b33515 215 Pfam PF01470 Pyroglutamyl peptidase 3 202 4.1E-83 T 13-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 Y11_18661 f0d193319379f60f0e05975252b33515 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 13-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 Y11_18661 f0d193319379f60f0e05975252b33515 215 PIRSF PIRSF015592 1 213 1.3E-89 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Y11_18661 f0d193319379f60f0e05975252b33515 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 214 2.7E-91 T 13-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 Y11_18661 f0d193319379f60f0e05975252b33515 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 13-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 Y11_18661 f0d193319379f60f0e05975252b33515 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 2.0E-47 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Y11_18661 f0d193319379f60f0e05975252b33515 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 2.0E-47 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Y11_18661 f0d193319379f60f0e05975252b33515 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 2.0E-47 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Y11_18661 f0d193319379f60f0e05975252b33515 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 2.0E-47 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Y11_18661 f0d193319379f60f0e05975252b33515 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 162 174 2.0E-47 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Y11_18661 f0d193319379f60f0e05975252b33515 215 Gene3D G3DSA:3.40.630.20 1 215 1.8E-83 T 13-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 Y11_18661 f0d193319379f60f0e05975252b33515 215 SUPERFAMILY SSF53182 1 215 4.32E-76 T 13-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 Y11_18661 f0d193319379f60f0e05975252b33515 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 201 42.05 T 13-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 Y11_04311 8fb9125013ae1e96ab8a68d3009c817e 250 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 1.6E-123 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Y11_04311 8fb9125013ae1e96ab8a68d3009c817e 250 Pfam PF02348 Cytidylyltransferase 4 221 8.1E-71 T 13-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 Y11_04311 8fb9125013ae1e96ab8a68d3009c817e 250 Gene3D G3DSA:3.90.550.10 1 250 9.0E-100 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_04311 8fb9125013ae1e96ab8a68d3009c817e 250 SUPERFAMILY SSF53448 3 247 7.27E-67 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_04311 8fb9125013ae1e96ab8a68d3009c817e 250 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.189 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Y11_16851 7514e2e88a8ca8058b1fc5776e5f92b6 213 PRINTS PR00988 Uridine kinase signature 157 168 4.9E-38 T 13-10-2018 Y11_16851 7514e2e88a8ca8058b1fc5776e5f92b6 213 PRINTS PR00988 Uridine kinase signature 87 102 4.9E-38 T 13-10-2018 Y11_16851 7514e2e88a8ca8058b1fc5776e5f92b6 213 PRINTS PR00988 Uridine kinase signature 8 25 4.9E-38 T 13-10-2018 Y11_16851 7514e2e88a8ca8058b1fc5776e5f92b6 213 PRINTS PR00988 Uridine kinase signature 143 153 4.9E-38 T 13-10-2018 Y11_16851 7514e2e88a8ca8058b1fc5776e5f92b6 213 PRINTS PR00988 Uridine kinase signature 179 192 4.9E-38 T 13-10-2018 Y11_16851 7514e2e88a8ca8058b1fc5776e5f92b6 213 PRINTS PR00988 Uridine kinase signature 42 53 4.9E-38 T 13-10-2018 Y11_16851 7514e2e88a8ca8058b1fc5776e5f92b6 213 TIGRFAM TIGR00235 udk: uridine kinase 6 213 5.0E-96 T 13-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 Y11_16851 7514e2e88a8ca8058b1fc5776e5f92b6 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 2.5E-43 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Y11_16851 7514e2e88a8ca8058b1fc5776e5f92b6 213 SUPERFAMILY SSF52540 8 205 4.77E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_16851 7514e2e88a8ca8058b1fc5776e5f92b6 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 41.317 T 13-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 Y11_16851 7514e2e88a8ca8058b1fc5776e5f92b6 213 Gene3D G3DSA:3.40.50.300 4 213 8.3E-62 T 13-10-2018 Y11_15631 3610b392144f8e2ef757816899739954 914 SUPERFAMILY SSF69279 204 375 5.1E-36 T 13-10-2018 Y11_15631 3610b392144f8e2ef757816899739954 914 SUPERFAMILY SSF69349 453 665 2.9E-42 T 13-10-2018 Y11_15631 3610b392144f8e2ef757816899739954 914 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 17 515 6.9E-118 T 13-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Y11_15631 3610b392144f8e2ef757816899739954 914 Gene3D G3DSA:3.30.1920.30 237 299 1.8E-90 T 13-10-2018 Y11_15631 3610b392144f8e2ef757816899739954 914 Gene3D G3DSA:2.40.50.230 366 467 1.0E-41 T 13-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily Y11_15631 3610b392144f8e2ef757816899739954 914 Gene3D G3DSA:3.55.50.10 111 201 1.8E-90 T 13-10-2018 Y11_15631 3610b392144f8e2ef757816899739954 914 SUPERFAMILY SSF69279 11 197 7.65E-50 T 13-10-2018 Y11_15631 3610b392144f8e2ef757816899739954 914 Gene3D G3DSA:2.30.110.50 10 342 1.8E-90 T 13-10-2018 Y11_15631 3610b392144f8e2ef757816899739954 914 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 532 4.2E-154 T 13-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Y11_15631 3610b392144f8e2ef757816899739954 914 Pfam PF05954 Phage late control gene D protein (GPD) 23 341 5.5E-87 T 13-10-2018 Y11_15631 3610b392144f8e2ef757816899739954 914 SUPERFAMILY SSF69255 375 463 8.11E-32 T 13-10-2018 Y11_39481 69aad0b7b80e51cda2ab1c75ebf2ff88 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 2.2E-5 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Y11_39481 69aad0b7b80e51cda2ab1c75ebf2ff88 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 2.2E-5 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Y11_39481 69aad0b7b80e51cda2ab1c75ebf2ff88 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 2.2E-5 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Y11_39481 69aad0b7b80e51cda2ab1c75ebf2ff88 256 Pfam PF01061 ABC-2 type transporter 9 218 1.1E-36 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Y11_39481 69aad0b7b80e51cda2ab1c75ebf2ff88 256 PIRSF PIRSF006648 7 253 2.2E-24 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Y11_40111 4dc6ebaa76db3252986d85a29deeec92 505 Gene3D G3DSA:2.40.50.140 15 154 6.3E-44 T 13-10-2018 Y11_40111 4dc6ebaa76db3252986d85a29deeec92 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 504 3.8E-230 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Y11_40111 4dc6ebaa76db3252986d85a29deeec92 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.323 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Y11_40111 4dc6ebaa76db3252986d85a29deeec92 505 PIRSF PIRSF039101 1 505 1.7E-200 T 13-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Y11_40111 4dc6ebaa76db3252986d85a29deeec92 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.5E-39 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Y11_40111 4dc6ebaa76db3252986d85a29deeec92 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.5E-39 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Y11_40111 4dc6ebaa76db3252986d85a29deeec92 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.5E-39 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Y11_40111 4dc6ebaa76db3252986d85a29deeec92 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.5E-39 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Y11_40111 4dc6ebaa76db3252986d85a29deeec92 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.5E-39 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Y11_40111 4dc6ebaa76db3252986d85a29deeec92 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 2.5E-15 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Y11_40111 4dc6ebaa76db3252986d85a29deeec92 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 5.6E-84 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_40111 4dc6ebaa76db3252986d85a29deeec92 505 SUPERFAMILY SSF55681 162 502 2.49E-124 T 13-10-2018 Y11_40111 4dc6ebaa76db3252986d85a29deeec92 505 Gene3D G3DSA:3.30.930.10 155 499 6.9E-136 T 13-10-2018 Y11_40111 4dc6ebaa76db3252986d85a29deeec92 505 SUPERFAMILY SSF50249 13 155 9.3E-48 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_21281 7b7a70b4e0bdcea111265196896de7d7 133 Gene3D G3DSA:3.30.310.230 1 133 1.8E-58 T 13-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 Y11_21281 7b7a70b4e0bdcea111265196896de7d7 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 3 128 32.525 T 13-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 Y11_21281 7b7a70b4e0bdcea111265196896de7d7 133 Pfam PF07417 Transcriptional regulator Crl 5 122 2.1E-55 T 13-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 Y11_17961 bd04dcf6d8f310d7eb6d30f10467037d 343 SMART SM00116 97 144 0.0032 T 13-10-2018 IPR000644 CBS domain Y11_17961 bd04dcf6d8f310d7eb6d30f10467037d 343 Gene3D G3DSA:3.10.580.10 21 149 2.8E-22 T 13-10-2018 Y11_17961 bd04dcf6d8f310d7eb6d30f10467037d 343 Gene3D G3DSA:1.10.357.20 163 339 3.1E-50 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Y11_17961 bd04dcf6d8f310d7eb6d30f10467037d 343 Pfam PF00571 CBS domain 26 82 0.0019 T 13-10-2018 IPR000644 CBS domain Y11_17961 bd04dcf6d8f310d7eb6d30f10467037d 343 Pfam PF00571 CBS domain 92 143 2.4E-4 T 13-10-2018 IPR000644 CBS domain Y11_17961 bd04dcf6d8f310d7eb6d30f10467037d 343 SUPERFAMILY SSF161093 168 337 3.53E-45 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Y11_17961 bd04dcf6d8f310d7eb6d30f10467037d 343 SUPERFAMILY SSF54631 25 164 8.56E-22 T 13-10-2018 Y11_17961 bd04dcf6d8f310d7eb6d30f10467037d 343 Pfam PF01769 Divalent cation transporter 211 332 4.1E-26 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Y11_17611 608d3d3b2b5789a75f88b9d0a2e853eb 326 Gene3D G3DSA:1.20.970.10 1 71 4.1E-31 T 13-10-2018 Y11_17611 608d3d3b2b5789a75f88b9d0a2e853eb 326 SUPERFAMILY SSF52418 76 317 1.57E-40 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_17611 608d3d3b2b5789a75f88b9d0a2e853eb 326 Gene3D G3DSA:3.40.1030.10 73 321 7.3E-93 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_17611 608d3d3b2b5789a75f88b9d0a2e853eb 326 SUPERFAMILY SSF47648 7 72 6.15E-15 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_17611 608d3d3b2b5789a75f88b9d0a2e853eb 326 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 68 1.6E-10 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_28601 3a493a2421a343c0c794792c50140ffe 257 Pfam PF03237 Terminase-like family 4 53 2.7E-7 T 13-10-2018 IPR004921 Terminase large subunit, T4likevirus-type Y11_28601 3a493a2421a343c0c794792c50140ffe 257 Gene3D G3DSA:3.30.420.240 56 239 7.7E-14 T 13-10-2018 Y11_28601 3a493a2421a343c0c794792c50140ffe 257 Pfam PF17289 Terminase RNaseH-like domain 81 239 1.3E-42 T 13-10-2018 IPR035421 Terminase, large subunit gp17-like Y11_12581 7a4180e7f97629203a8ff5d23ac3e4b0 293 Gene3D G3DSA:3.30.70.890 166 284 7.0E-27 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Y11_12581 7a4180e7f97629203a8ff5d23ac3e4b0 293 Pfam PF00288 GHMP kinases N terminal domain 92 149 9.6E-12 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Y11_12581 7a4180e7f97629203a8ff5d23ac3e4b0 293 PIRSF PIRSF010376 5 284 8.2E-84 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Y11_12581 7a4180e7f97629203a8ff5d23ac3e4b0 293 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 6 281 4.6E-107 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Y11_12581 7a4180e7f97629203a8ff5d23ac3e4b0 293 Pfam PF08544 GHMP kinases C terminal 207 261 7.1E-6 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain Y11_12581 7a4180e7f97629203a8ff5d23ac3e4b0 293 SUPERFAMILY SSF54211 7 162 8.35E-47 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_12581 7a4180e7f97629203a8ff5d23ac3e4b0 293 Gene3D G3DSA:3.30.230.10 6 164 5.9E-55 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y11_12581 7a4180e7f97629203a8ff5d23ac3e4b0 293 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 7 276 32.267 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Y11_12581 7a4180e7f97629203a8ff5d23ac3e4b0 293 SUPERFAMILY SSF55060 168 282 4.03E-36 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Y11_18981 c827cd66cdb55b91ddc8d7a1c7ee8e83 663 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 515 638 2.0E-46 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 Y11_18981 c827cd66cdb55b91ddc8d7a1c7ee8e83 663 SUPERFAMILY SSF51261 507 658 1.36E-50 T 13-10-2018 IPR011055 Duplicated hybrid motif Y11_18981 c827cd66cdb55b91ddc8d7a1c7ee8e83 663 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 515 635 8.7E-47 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 Y11_18981 c827cd66cdb55b91ddc8d7a1c7ee8e83 663 Pfam PF02378 Phosphotransferase system, EIIC 1 310 1.6E-76 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Y11_18981 c827cd66cdb55b91ddc8d7a1c7ee8e83 663 Gene3D G3DSA:2.70.70.10 503 662 1.3E-52 T 13-10-2018 IPR011055 Duplicated hybrid motif Y11_18981 c827cd66cdb55b91ddc8d7a1c7ee8e83 663 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 577 589 - T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 Y11_18981 c827cd66cdb55b91ddc8d7a1c7ee8e83 663 SUPERFAMILY SSF55604 408 481 7.32E-18 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_18981 c827cd66cdb55b91ddc8d7a1c7ee8e83 663 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 479 3.6E-197 T 13-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 Y11_18981 c827cd66cdb55b91ddc8d7a1c7ee8e83 663 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 421 438 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Y11_18981 c827cd66cdb55b91ddc8d7a1c7ee8e83 663 Pfam PF00367 phosphotransferase system, EIIB 411 443 9.5E-12 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Y11_18981 c827cd66cdb55b91ddc8d7a1c7ee8e83 663 Gene3D G3DSA:3.30.1360.60 404 484 2.5E-22 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_18981 c827cd66cdb55b91ddc8d7a1c7ee8e83 663 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 369 468 9.4E-20 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 Y11_38411 656f99a85e893a9288f6880f033faae1 635 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 1.4E-289 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Y11_38411 656f99a85e893a9288f6880f033faae1 635 Pfam PF00012 Hsp70 protein 4 602 1.8E-264 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_38411 656f99a85e893a9288f6880f033faae1 635 SUPERFAMILY SSF100920 384 540 1.22E-60 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Y11_38411 656f99a85e893a9288f6880f033faae1 635 Gene3D G3DSA:3.30.420.40 5 379 6.1E-171 T 13-10-2018 Y11_38411 656f99a85e893a9288f6880f033faae1 635 Gene3D G3DSA:1.20.1270.10 524 603 3.4E-29 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Y11_38411 656f99a85e893a9288f6880f033faae1 635 SUPERFAMILY SSF100934 535 608 7.85E-7 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Y11_38411 656f99a85e893a9288f6880f033faae1 635 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 631 36.711 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Y11_38411 656f99a85e893a9288f6880f033faae1 635 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Y11_38411 656f99a85e893a9288f6880f033faae1 635 Gene3D G3DSA:3.90.640.10 229 316 6.1E-171 T 13-10-2018 Y11_38411 656f99a85e893a9288f6880f033faae1 635 SUPERFAMILY SSF53067 187 382 8.43E-68 T 13-10-2018 Y11_38411 656f99a85e893a9288f6880f033faae1 635 Gene3D G3DSA:2.60.34.10 383 523 8.3E-67 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Y11_38411 656f99a85e893a9288f6880f033faae1 635 Gene3D G3DSA:3.30.420.40 180 366 6.1E-171 T 13-10-2018 Y11_38411 656f99a85e893a9288f6880f033faae1 635 SUPERFAMILY SSF53067 4 183 1.3E-65 T 13-10-2018 Y11_38411 656f99a85e893a9288f6880f033faae1 635 PRINTS PR00301 70kDa heat shock protein signature 138 158 4.1E-79 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_38411 656f99a85e893a9288f6880f033faae1 635 PRINTS PR00301 70kDa heat shock protein signature 334 350 4.1E-79 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_38411 656f99a85e893a9288f6880f033faae1 635 PRINTS PR00301 70kDa heat shock protein signature 469 485 4.1E-79 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_38411 656f99a85e893a9288f6880f033faae1 635 PRINTS PR00301 70kDa heat shock protein signature 198 208 4.1E-79 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_38411 656f99a85e893a9288f6880f033faae1 635 PRINTS PR00301 70kDa heat shock protein signature 3 16 4.1E-79 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_38411 656f99a85e893a9288f6880f033faae1 635 PRINTS PR00301 70kDa heat shock protein signature 31 43 4.1E-79 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_38411 656f99a85e893a9288f6880f033faae1 635 PRINTS PR00301 70kDa heat shock protein signature 54 62 4.1E-79 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_38411 656f99a85e893a9288f6880f033faae1 635 PRINTS PR00301 70kDa heat shock protein signature 388 407 4.1E-79 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_38411 656f99a85e893a9288f6880f033faae1 635 PRINTS PR00301 70kDa heat shock protein signature 365 385 4.1E-79 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Y11_38411 656f99a85e893a9288f6880f033faae1 635 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Y11_38411 656f99a85e893a9288f6880f033faae1 635 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Y11_33981 89fc163daadafec0a043860a2256f5e3 276 PIRSF PIRSF034452 1 276 3.4E-163 T 13-10-2018 IPR009215 TIM-barrel domain, IGPS-like Y11_33981 89fc163daadafec0a043860a2256f5e3 276 Gene3D G3DSA:3.20.20.70 1 252 2.0E-121 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_33981 89fc163daadafec0a043860a2256f5e3 276 SUPERFAMILY SSF51621 3 197 2.07E-84 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Y11_33981 89fc163daadafec0a043860a2256f5e3 276 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 9 274 3.0E-133 T 13-10-2018 IPR009215 TIM-barrel domain, IGPS-like Y11_32931 37dd206a14d77ee1c07f68e9ddf79c19 110 Gene3D G3DSA:3.90.470.10 1 110 2.4E-46 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Y11_32931 37dd206a14d77ee1c07f68e9ddf79c19 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 13-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32931 37dd206a14d77ee1c07f68e9ddf79c19 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.2E-50 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_32931 37dd206a14d77ee1c07f68e9ddf79c19 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 9.7E-38 T 13-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Y11_32931 37dd206a14d77ee1c07f68e9ddf79c19 110 SUPERFAMILY SSF54843 1 109 2.35E-42 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Y11_32931 37dd206a14d77ee1c07f68e9ddf79c19 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.77 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_40071 ec7936892e472ebbff45cfe59de68ee4 299 SUPERFAMILY SSF56349 107 297 1.85E-57 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Y11_40071 ec7936892e472ebbff45cfe59de68ee4 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 299 63.865 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Y11_40071 ec7936892e472ebbff45cfe59de68ee4 299 Gene3D G3DSA:1.10.443.10 111 293 4.7E-78 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Y11_40071 ec7936892e472ebbff45cfe59de68ee4 299 Gene3D G3DSA:1.10.150.130 5 100 4.7E-21 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Y11_40071 ec7936892e472ebbff45cfe59de68ee4 299 Pfam PF00589 Phage integrase family 114 285 1.4E-55 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Y11_40071 ec7936892e472ebbff45cfe59de68ee4 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 299 58.771 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Y11_40071 ec7936892e472ebbff45cfe59de68ee4 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 2.2E-23 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Y11_40071 ec7936892e472ebbff45cfe59de68ee4 299 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 10 299 1.2E-118 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Y11_40071 ec7936892e472ebbff45cfe59de68ee4 299 SUPERFAMILY SSF47823 5 101 2.35E-36 T 13-10-2018 Y11_08641 9002ded9e46b031df4e1c943050155fb 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 295 3.6E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_08641 9002ded9e46b031df4e1c943050155fb 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 2.7E-6 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Y11_08641 9002ded9e46b031df4e1c943050155fb 296 SUPERFAMILY SSF161098 90 277 4.06E-21 T 13-10-2018 IPR035906 MetI-like superfamily Y11_08641 9002ded9e46b031df4e1c943050155fb 296 Gene3D G3DSA:1.10.3720.10 85 293 7.6E-17 T 13-10-2018 IPR035906 MetI-like superfamily Y11_31071 13bd7dcb59b19564b40cc1d98a9c8265 141 Pfam PF02566 OsmC-like protein 45 138 2.0E-16 T 13-10-2018 IPR003718 OsmC/Ohr family Y11_31071 13bd7dcb59b19564b40cc1d98a9c8265 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 4.5E-55 T 13-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 Y11_31071 13bd7dcb59b19564b40cc1d98a9c8265 141 Gene3D G3DSA:2.20.25.10 1 47 1.0E-22 T 13-10-2018 Y11_31071 13bd7dcb59b19564b40cc1d98a9c8265 141 Gene3D G3DSA:3.30.300.20 48 141 7.7E-33 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Y11_31071 13bd7dcb59b19564b40cc1d98a9c8265 141 SUPERFAMILY SSF82784 1 140 2.36E-43 T 13-10-2018 IPR036102 OsmC/Ohr superfamily Y11_27341 24de6b87f306c848fa27929d0184a238 306 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 306 68.875 T 13-10-2018 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 Y11_27341 24de6b87f306c848fa27929d0184a238 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 50.009 T 13-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 Y11_27341 24de6b87f306c848fa27929d0184a238 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 297 8.7E-101 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Y11_27341 24de6b87f306c848fa27929d0184a238 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 306 1.8E-136 T 13-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 Y11_27341 24de6b87f306c848fa27929d0184a238 306 PIRSF PIRSF026649 3 306 8.5E-93 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Y11_26001 c0fb222b5ae4fa3e74f87a804d052b19 46 Gene3D G3DSA:3.90.180.10 12 39 1.0E-9 T 13-10-2018 Y11_26001 c0fb222b5ae4fa3e74f87a804d052b19 46 Gene3D G3DSA:3.40.50.720 1 11 1.0E-9 T 13-10-2018 Y11_37031 3881cf1a40377422c448ced686c6b423 101 SUPERFAMILY SSF52540 1 86 7.54E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_37031 3881cf1a40377422c448ced686c6b423 101 Gene3D G3DSA:3.40.50.300 9 92 1.6E-6 T 13-10-2018 Y11_12021 6430fccdfedf125ee8ce2dd70e0e5b75 384 SUPERFAMILY SSF53697 15 373 1.76E-51 T 13-10-2018 Y11_12021 6430fccdfedf125ee8ce2dd70e0e5b75 384 Gene3D G3DSA:3.40.50.10490 2 197 2.2E-59 T 13-10-2018 Y11_12021 6430fccdfedf125ee8ce2dd70e0e5b75 384 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 13 382 1.7E-174 T 13-10-2018 IPR014180 Sugar isomerase, AgaS GO:0016853 Y11_12021 6430fccdfedf125ee8ce2dd70e0e5b75 384 Gene3D G3DSA:3.40.50.10490 198 376 6.3E-72 T 13-10-2018 Y11_12021 6430fccdfedf125ee8ce2dd70e0e5b75 384 Pfam PF01380 SIS domain 225 351 4.6E-16 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_12021 6430fccdfedf125ee8ce2dd70e0e5b75 384 Pfam PF01380 SIS domain 49 187 1.0E-24 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_06201 bbc5cc94a45cb4fa3f6c37e71b518cb8 277 SUPERFAMILY SSF56601 228 277 1.06E-10 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_06201 bbc5cc94a45cb4fa3f6c37e71b518cb8 277 Gene3D G3DSA:3.40.710.10 226 277 6.1E-15 T 13-10-2018 Y11_06201 bbc5cc94a45cb4fa3f6c37e71b518cb8 277 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 213 3.0E-17 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Y11_06201 bbc5cc94a45cb4fa3f6c37e71b518cb8 277 SUPERFAMILY SSF56519 56 227 2.49E-46 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Y11_06201 bbc5cc94a45cb4fa3f6c37e71b518cb8 277 Gene3D G3DSA:3.90.1310.30 52 225 5.6E-46 T 13-10-2018 Y11_16181 46d46a17b3814bdc13fe9b31259151b8 223 SUPERFAMILY SSF52968 46 223 3.27E-72 T 13-10-2018 IPR010254 B12-dependent dehydratases, beta subunit Y11_16181 46d46a17b3814bdc13fe9b31259151b8 223 Pfam PF02288 Dehydratase medium subunit 68 180 6.0E-34 T 13-10-2018 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor Y11_16181 46d46a17b3814bdc13fe9b31259151b8 223 Gene3D G3DSA:3.40.50.10150 45 223 1.9E-89 T 13-10-2018 IPR010254 B12-dependent dehydratases, beta subunit Y11_16181 46d46a17b3814bdc13fe9b31259151b8 223 PIRSF PIRSF018506 1 223 4.9E-110 T 13-10-2018 IPR025541 Propanediol/glycerol dehydratase, medium subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 Y11_07271 a417d9fd39be7f7bf726d41d26963d4a 336 SUPERFAMILY SSF49401 213 336 1.09E-5 T 13-10-2018 IPR008966 Adhesion domain superfamily Y11_07271 a417d9fd39be7f7bf726d41d26963d4a 336 SMART SM00972 277 333 6.8E-14 T 13-10-2018 IPR007893 Spore coat protein U Y11_07271 a417d9fd39be7f7bf726d41d26963d4a 336 SMART SM00972 105 172 0.0029 T 13-10-2018 IPR007893 Spore coat protein U Y11_07271 a417d9fd39be7f7bf726d41d26963d4a 336 Pfam PF05229 Spore Coat Protein U domain 201 331 1.9E-25 T 13-10-2018 IPR007893 Spore coat protein U Y11_07271 a417d9fd39be7f7bf726d41d26963d4a 336 Pfam PF05229 Spore Coat Protein U domain 32 170 8.0E-12 T 13-10-2018 IPR007893 Spore coat protein U Y11_00831 02a4db3fe648e79fe071b0e0ba0b2258 471 SUPERFAMILY SSF48163 299 461 7.32E-45 T 13-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Y11_00831 02a4db3fe648e79fe071b0e0ba0b2258 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 6.9E-117 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Y11_00831 02a4db3fe648e79fe071b0e0ba0b2258 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_00831 02a4db3fe648e79fe071b0e0ba0b2258 471 Gene3D G3DSA:3.40.50.620 1 313 2.9E-135 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_00831 02a4db3fe648e79fe071b0e0ba0b2258 471 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 32.902 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Y11_00831 02a4db3fe648e79fe071b0e0ba0b2258 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 462 6.3E-202 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Y11_00831 02a4db3fe648e79fe071b0e0ba0b2258 471 SUPERFAMILY SSF52374 3 298 3.22E-113 T 13-10-2018 Y11_00831 02a4db3fe648e79fe071b0e0ba0b2258 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 4.9E-27 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Y11_00831 02a4db3fe648e79fe071b0e0ba0b2258 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 4.9E-27 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Y11_00831 02a4db3fe648e79fe071b0e0ba0b2258 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 4.9E-27 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Y11_00831 02a4db3fe648e79fe071b0e0ba0b2258 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 4.9E-27 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Y11_00831 02a4db3fe648e79fe071b0e0ba0b2258 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 4.9E-27 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Y11_00831 02a4db3fe648e79fe071b0e0ba0b2258 471 Gene3D G3DSA:1.10.10.350 367 470 5.6E-24 T 13-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Y11_19771 0d6b482931b181103639e127616b0f28 289 Pfam PF14559 Tetratricopeptide repeat 124 195 1.1E-20 T 13-10-2018 Y11_19771 0d6b482931b181103639e127616b0f28 289 Gene3D G3DSA:1.25.40.10 202 289 3.7E-26 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_19771 0d6b482931b181103639e127616b0f28 289 Gene3D G3DSA:1.25.40.10 112 201 5.0E-25 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_19771 0d6b482931b181103639e127616b0f28 289 SUPERFAMILY SSF48452 120 242 3.5E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_19771 0d6b482931b181103639e127616b0f28 289 SUPERFAMILY SSF52833 4 113 9.25E-30 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_19771 0d6b482931b181103639e127616b0f28 289 Pfam PF00085 Thioredoxin 8 107 8.4E-18 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 Y11_19771 0d6b482931b181103639e127616b0f28 289 Pfam PF14561 Tetratricopeptide repeat 200 289 2.6E-30 T 13-10-2018 Y11_19771 0d6b482931b181103639e127616b0f28 289 Gene3D G3DSA:3.40.30.10 3 111 5.6E-27 T 13-10-2018 Y11_30021 cda6e9cfc1a984b78a2d77a21aa9f31b 41 SMART SM01234 1 31 0.0011 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Y11_30021 cda6e9cfc1a984b78a2d77a21aa9f31b 41 Pfam PF01809 Haemolytic domain 2 31 2.3E-10 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Y11_30021 cda6e9cfc1a984b78a2d77a21aa9f31b 41 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 1 24 2.0E-6 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Y11_29811 b7f9cb5ebb07494a50daf7a11423ebeb 295 Gene3D G3DSA:1.10.3720.10 13 287 2.1E-28 T 13-10-2018 IPR035906 MetI-like superfamily Y11_29811 b7f9cb5ebb07494a50daf7a11423ebeb 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 2.2E-29 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_29811 b7f9cb5ebb07494a50daf7a11423ebeb 295 SUPERFAMILY SSF161098 31 285 1.12E-33 T 13-10-2018 IPR035906 MetI-like superfamily Y11_29811 b7f9cb5ebb07494a50daf7a11423ebeb 295 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 293 3.3E-84 T 13-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Y11_03241 f26966583cad051b2cbd0db07c1d5c70 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 13-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Y11_03241 f26966583cad051b2cbd0db07c1d5c70 377 SUPERFAMILY SSF55804 2 140 3.01E-38 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Y11_03241 f26966583cad051b2cbd0db07c1d5c70 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 139 2.2E-29 T 13-10-2018 IPR002178 PTS EIIA type-2 domain Y11_03241 f26966583cad051b2cbd0db07c1d5c70 377 SUPERFAMILY SSF55804 148 276 2.44E-13 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Y11_03241 f26966583cad051b2cbd0db07c1d5c70 377 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 8.3E-22 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Y11_03241 f26966583cad051b2cbd0db07c1d5c70 377 Gene3D G3DSA:3.40.930.10 1 143 4.2E-40 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Y11_03241 f26966583cad051b2cbd0db07c1d5c70 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain Y11_03241 f26966583cad051b2cbd0db07c1d5c70 377 SUPERFAMILY SSF55594 287 375 1.57E-23 T 13-10-2018 IPR035895 HPr-like superfamily Y11_03241 f26966583cad051b2cbd0db07c1d5c70 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Y11_03241 f26966583cad051b2cbd0db07c1d5c70 377 Gene3D G3DSA:3.30.1340.10 285 370 2.2E-25 T 13-10-2018 IPR035895 HPr-like superfamily Y11_03241 f26966583cad051b2cbd0db07c1d5c70 377 PRINTS PR00107 Phosphocarrier protein signature 297 313 1.8E-17 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Y11_03241 f26966583cad051b2cbd0db07c1d5c70 377 PRINTS PR00107 Phosphocarrier protein signature 325 340 1.8E-17 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Y11_03241 f26966583cad051b2cbd0db07c1d5c70 377 PRINTS PR00107 Phosphocarrier protein signature 340 357 1.8E-17 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Y11_03241 f26966583cad051b2cbd0db07c1d5c70 377 Pfam PF00381 PTS HPr component phosphorylation site 287 368 5.8E-24 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Y11_28331 12470d4002f16b65b62a81944ebc7daa 248 Gene3D G3DSA:2.40.30.10 1 96 3.2E-30 T 13-10-2018 Y11_28331 12470d4002f16b65b62a81944ebc7daa 248 SUPERFAMILY SSF52343 104 248 3.93E-39 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Y11_28331 12470d4002f16b65b62a81944ebc7daa 248 Pfam PF00970 Oxidoreductase FAD-binding domain 19 90 1.2E-7 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Y11_28331 12470d4002f16b65b62a81944ebc7daa 248 Gene3D G3DSA:3.40.50.80 97 248 1.3E-42 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Y11_28331 12470d4002f16b65b62a81944ebc7daa 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 3.3E-18 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Y11_28331 12470d4002f16b65b62a81944ebc7daa 248 SUPERFAMILY SSF63380 3 99 2.33E-23 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Y11_25631 4c1a78cb4c46bb4285ce7920834c1173 314 SUPERFAMILY SSF56601 5 309 2.36E-104 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_25631 4c1a78cb4c46bb4285ce7920834c1173 314 TIGRFAM TIGR03814 Gln_ase: glutaminase A 12 309 1.6E-107 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Y11_25631 4c1a78cb4c46bb4285ce7920834c1173 314 Pfam PF04960 Glutaminase 25 309 4.0E-99 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Y11_25631 4c1a78cb4c46bb4285ce7920834c1173 314 Hamap MF_00313 Glutaminase [glsA]. 7 309 40.724 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Y11_25631 4c1a78cb4c46bb4285ce7920834c1173 314 Gene3D G3DSA:3.40.710.10 2 311 6.1E-111 T 13-10-2018 Y11_41541 bfc2cdb7ad5990de68e93579ec03f2a5 323 SUPERFAMILY SSF47240 9 323 1.15E-106 T 13-10-2018 IPR009078 Ferritin-like superfamily Y11_41541 bfc2cdb7ad5990de68e93579ec03f2a5 323 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 101 117 - T 13-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_41541 bfc2cdb7ad5990de68e93579ec03f2a5 323 Gene3D G3DSA:1.10.620.20 5 292 1.8E-115 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Y11_41541 bfc2cdb7ad5990de68e93579ec03f2a5 323 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 11 323 3.5E-146 T 13-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Y11_41541 bfc2cdb7ad5990de68e93579ec03f2a5 323 Pfam PF00268 Ribonucleotide reductase, small chain 13 283 8.4E-87 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_41541 bfc2cdb7ad5990de68e93579ec03f2a5 323 PIRSF PIRSF000355 2 320 2.3E-83 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_07661 2e877de35ad127c9a2d93a927acb83e6 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Y11_07661 2e877de35ad127c9a2d93a927acb83e6 261 SUPERFAMILY SSF52096 1 260 1.9E-61 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Y11_07661 2e877de35ad127c9a2d93a927acb83e6 261 Gene3D G3DSA:3.90.226.10 2 184 1.6E-56 T 13-10-2018 Y11_07661 2e877de35ad127c9a2d93a927acb83e6 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 6.7E-44 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Y11_07661 2e877de35ad127c9a2d93a927acb83e6 261 Gene3D G3DSA:1.10.12.10 203 260 5.8E-30 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Y11_11631 1fe41b6c69863aada8fd287cfd6e794a 564 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 5.9E-16 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Y11_11631 1fe41b6c69863aada8fd287cfd6e794a 564 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 13-10-2018 IPR020845 AMP-binding, conserved site Y11_11631 1fe41b6c69863aada8fd287cfd6e794a 564 SUPERFAMILY SSF56801 17 553 7.98E-149 T 13-10-2018 Y11_11631 1fe41b6c69863aada8fd287cfd6e794a 564 Pfam PF00501 AMP-binding enzyme 29 460 7.5E-110 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Y11_11631 1fe41b6c69863aada8fd287cfd6e794a 564 Gene3D G3DSA:3.40.50.12780 12 451 1.3E-117 T 13-10-2018 Y11_11631 1fe41b6c69863aada8fd287cfd6e794a 564 Gene3D G3DSA:3.30.300.310 456 558 6.9E-30 T 13-10-2018 Y11_41061 6493de886d9e1b8523afc69fb930541c 398 SUPERFAMILY SSF69055 301 395 9.29E-29 T 13-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Y11_41061 6493de886d9e1b8523afc69fb930541c 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 5.7E-46 T 13-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Y11_41061 6493de886d9e1b8523afc69fb930541c 398 SUPERFAMILY SSF55347 126 274 2.84E-61 T 13-10-2018 Y11_41061 6493de886d9e1b8523afc69fb930541c 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 396 5.7E-176 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Y11_41061 6493de886d9e1b8523afc69fb930541c 398 SUPERFAMILY SSF51735 2 150 5.91E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_41061 6493de886d9e1b8523afc69fb930541c 398 Gene3D G3DSA:3.40.50.720 1 150 7.3E-56 T 13-10-2018 Y11_41061 6493de886d9e1b8523afc69fb930541c 398 Gene3D G3DSA:1.10.1740.10 312 398 3.0E-29 T 13-10-2018 Y11_41061 6493de886d9e1b8523afc69fb930541c 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 3.9E-39 T 13-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Y11_41061 6493de886d9e1b8523afc69fb930541c 398 PIRSF PIRSF006205 1 398 2.7E-151 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Y11_41061 6493de886d9e1b8523afc69fb930541c 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 4.2E-35 T 13-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Y11_41061 6493de886d9e1b8523afc69fb930541c 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 45.647 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Y11_18251 efb578d3fa93b1d3a6258c3e1e00f090 134 SUPERFAMILY SSF53850 30 121 4.17E-28 T 13-10-2018 Y11_18251 efb578d3fa93b1d3a6258c3e1e00f090 134 Gene3D G3DSA:3.40.190.10 108 128 2.4E-34 T 13-10-2018 Y11_18251 efb578d3fa93b1d3a6258c3e1e00f090 134 Gene3D G3DSA:3.40.190.10 32 107 2.4E-34 T 13-10-2018 Y11_18251 efb578d3fa93b1d3a6258c3e1e00f090 134 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 35 129 3.4E-34 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Y11_18251 efb578d3fa93b1d3a6258c3e1e00f090 134 Pfam PF13531 Bacterial extracellular solute-binding protein 32 119 1.1E-19 T 13-10-2018 Y11_14841 57c1bb0cbeaee955cd3f5d0d41d2da16 177 Pfam PF10777 Inner membrane protein YlaC 1 153 2.3E-70 T 13-10-2018 IPR019713 Inner membrane protein YlaC Y11_26391 37bb6f90203cf83159c027b5b2781354 113 Pfam PF13466 STAS domain 14 90 1.2E-19 T 13-10-2018 IPR002645 STAS domain Y11_26391 37bb6f90203cf83159c027b5b2781354 113 Gene3D G3DSA:3.30.750.24 6 100 3.4E-13 T 13-10-2018 IPR036513 STAS domain superfamily Y11_26391 37bb6f90203cf83159c027b5b2781354 113 SUPERFAMILY SSF52091 6 96 1.84E-17 T 13-10-2018 IPR036513 STAS domain superfamily Y11_39741 a711591ee52784ad46493285ed019d09 505 Gene3D G3DSA:1.10.3210.10 1 158 4.8E-44 T 13-10-2018 Y11_39741 a711591ee52784ad46493285ed019d09 505 Pfam PF13286 Phosphohydrolase-associated domain 441 500 6.8E-6 T 13-10-2018 IPR026875 Phosphohydrolase-associated domain Y11_39741 a711591ee52784ad46493285ed019d09 505 Gene3D G3DSA:1.10.3410.10 263 390 5.2E-22 T 13-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 Y11_39741 a711591ee52784ad46493285ed019d09 505 Pfam PF01966 HD domain 66 134 2.4E-10 T 13-10-2018 IPR006674 HD domain Y11_39741 a711591ee52784ad46493285ed019d09 505 Gene3D G3DSA:1.10.3210.10 159 262 4.5E-14 T 13-10-2018 Y11_39741 a711591ee52784ad46493285ed019d09 505 SUPERFAMILY SSF109604 30 502 2.46E-63 T 13-10-2018 Y11_39741 a711591ee52784ad46493285ed019d09 505 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 505 52.514 T 13-10-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 Y11_39741 a711591ee52784ad46493285ed019d09 505 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 31 503 8.9E-125 T 13-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 Y11_39741 a711591ee52784ad46493285ed019d09 505 SMART SM00471 62 282 1.9E-11 T 13-10-2018 IPR003607 HD/PDEase domain Y11_27711 55c725f0d06233fdba5b99da0c84b158 371 SMART SM00382 28 211 7.4E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_27711 55c725f0d06233fdba5b99da0c84b158 371 SUPERFAMILY SSF50331 236 364 2.28E-31 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Y11_27711 55c725f0d06233fdba5b99da0c84b158 371 Gene3D G3DSA:2.40.50.140 294 347 1.2E-29 T 13-10-2018 Y11_27711 55c725f0d06233fdba5b99da0c84b158 371 SUPERFAMILY SSF52540 4 243 3.96E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_27711 55c725f0d06233fdba5b99da0c84b158 371 Gene3D G3DSA:2.40.50.100 239 293 2.4E-20 T 13-10-2018 Y11_27711 55c725f0d06233fdba5b99da0c84b158 371 Pfam PF08402 TOBE domain 283 355 6.3E-11 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Y11_27711 55c725f0d06233fdba5b99da0c84b158 371 Pfam PF00005 ABC transporter 20 161 1.2E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_27711 55c725f0d06233fdba5b99da0c84b158 371 Gene3D G3DSA:3.40.50.300 1 238 1.2E-74 T 13-10-2018 Y11_27711 55c725f0d06233fdba5b99da0c84b158 371 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_23871 1b8e8dffaec015a6c46e48abf33e21ac 63 Pfam PF00873 AcrB/AcrD/AcrF family 1 43 4.9E-11 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_23871 1b8e8dffaec015a6c46e48abf33e21ac 63 Gene3D G3DSA:1.20.1640.10 1 63 3.1E-12 T 13-10-2018 Y11_23871 1b8e8dffaec015a6c46e48abf33e21ac 63 SUPERFAMILY SSF82866 2 49 7.06E-7 T 13-10-2018 Y11_38801 92d6a4ab936f0bb35e18c520908cb963 418 PRINTS PR00166 Aromatic amino acid permease signature 200 222 1.3E-99 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_38801 92d6a4ab936f0bb35e18c520908cb963 418 PRINTS PR00166 Aromatic amino acid permease signature 162 182 1.3E-99 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_38801 92d6a4ab936f0bb35e18c520908cb963 418 PRINTS PR00166 Aromatic amino acid permease signature 52 71 1.3E-99 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_38801 92d6a4ab936f0bb35e18c520908cb963 418 PRINTS PR00166 Aromatic amino acid permease signature 97 117 1.3E-99 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_38801 92d6a4ab936f0bb35e18c520908cb963 418 PRINTS PR00166 Aromatic amino acid permease signature 237 256 1.3E-99 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_38801 92d6a4ab936f0bb35e18c520908cb963 418 PRINTS PR00166 Aromatic amino acid permease signature 332 350 1.3E-99 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_38801 92d6a4ab936f0bb35e18c520908cb963 418 PRINTS PR00166 Aromatic amino acid permease signature 298 317 1.3E-99 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_38801 92d6a4ab936f0bb35e18c520908cb963 418 PRINTS PR00166 Aromatic amino acid permease signature 25 48 1.3E-99 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_38801 92d6a4ab936f0bb35e18c520908cb963 418 PRINTS PR00166 Aromatic amino acid permease signature 353 372 1.3E-99 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_38801 92d6a4ab936f0bb35e18c520908cb963 418 Pfam PF03222 Tryptophan/tyrosine permease family 16 407 1.1E-145 T 13-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 Y11_38801 92d6a4ab936f0bb35e18c520908cb963 418 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 22 400 5.6E-152 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_32151 8d74fe995ca49599e0d24df6a5a0e460 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.2E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_32151 8d74fe995ca49599e0d24df6a5a0e460 239 SUPERFAMILY SSF52172 3 126 1.15E-41 T 13-10-2018 IPR011006 CheY-like superfamily Y11_32151 8d74fe995ca49599e0d24df6a5a0e460 239 SUPERFAMILY SSF46894 132 234 2.07E-26 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_32151 8d74fe995ca49599e0d24df6a5a0e460 239 SMART SM00862 156 232 1.7E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_32151 8d74fe995ca49599e0d24df6a5a0e460 239 Gene3D G3DSA:3.40.50.2300 1 126 3.2E-40 T 13-10-2018 Y11_32151 8d74fe995ca49599e0d24df6a5a0e460 239 SMART SM00448 5 116 1.2E-44 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_32151 8d74fe995ca49599e0d24df6a5a0e460 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_32151 8d74fe995ca49599e0d24df6a5a0e460 239 Gene3D G3DSA:1.10.10.10 130 239 1.2E-39 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_25031 c49e38de127383b34d00e723823af3ec 272 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 264 1.3E-97 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Y11_25031 c49e38de127383b34d00e723823af3ec 272 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 271 18.092 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Y11_25031 c49e38de127383b34d00e723823af3ec 272 Pfam PF02673 Bacitracin resistance protein BacA 10 265 3.6E-85 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Y11_01291 6a03077f7d859f5508b277e52e8a8aeb 303 Pfam PF01226 Formate/nitrite transporter 42 276 3.2E-41 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 Y11_01291 6a03077f7d859f5508b277e52e8a8aeb 303 Gene3D G3DSA:1.20.1080.10 54 281 3.4E-36 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Y11_41511 de6ced9bb68da8e4ae0d6eca19359832 326 Gene3D G3DSA:3.40.190.100 105 244 5.7E-139 T 13-10-2018 Y11_41511 de6ced9bb68da8e4ae0d6eca19359832 326 SUPERFAMILY SSF53850 16 316 2.61E-93 T 13-10-2018 Y11_41511 de6ced9bb68da8e4ae0d6eca19359832 326 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 23 303 1.6E-52 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Y11_41511 de6ced9bb68da8e4ae0d6eca19359832 326 Gene3D G3DSA:3.40.190.10 17 316 5.7E-139 T 13-10-2018 Y11_07681 a1f9b70c6dc3e7edd6366b24205b9cd8 714 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 583 713 7.4E-62 T 13-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Y11_07681 a1f9b70c6dc3e7edd6366b24205b9cd8 714 SUPERFAMILY SSF51703 3 542 4.71E-217 T 13-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Y11_07681 a1f9b70c6dc3e7edd6366b24205b9cd8 714 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 28 547 9.8E-273 T 13-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Y11_07681 a1f9b70c6dc3e7edd6366b24205b9cd8 714 Gene3D G3DSA:3.40.50.280 569 714 5.4E-49 T 13-10-2018 Y11_07681 a1f9b70c6dc3e7edd6366b24205b9cd8 714 Gene3D G3DSA:3.20.20.240 2 559 4.7E-238 T 13-10-2018 Y11_07681 a1f9b70c6dc3e7edd6366b24205b9cd8 714 Pfam PF02310 B12 binding domain 586 700 5.1E-16 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Y11_07681 a1f9b70c6dc3e7edd6366b24205b9cd8 714 SUPERFAMILY SSF52242 555 712 4.84E-55 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Y11_07681 a1f9b70c6dc3e7edd6366b24205b9cd8 714 Pfam PF01642 Methylmalonyl-CoA mutase 29 539 1.5E-234 T 13-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Y11_07681 a1f9b70c6dc3e7edd6366b24205b9cd8 714 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 370 395 - T 13-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Y11_06991 e3d5b67429c000aaae33baf6ab82b47e 446 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 1 446 2.5E-194 T 13-10-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:1901515 Y11_06991 e3d5b67429c000aaae33baf6ab82b47e 446 Gene3D G3DSA:1.25.40.10 1 156 5.3E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_37551 9c07c4596607684da50b49bb0e7f5ea6 160 Pfam PF10696 Protein of unknown function (DUF2501) 79 157 4.3E-29 T 13-10-2018 IPR019637 Protein of unknown function DUF2501 Y11_32521 5a80d57a5cca6a6698005ab1e16a834b 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 9.2E-6 T 13-10-2018 Y11_32521 5a80d57a5cca6a6698005ab1e16a834b 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 9.2E-6 T 13-10-2018 Y11_32521 5a80d57a5cca6a6698005ab1e16a834b 191 Pfam PF00117 Glutamine amidotransferase class-I 3 189 1.4E-53 T 13-10-2018 IPR017926 Glutamine amidotransferase Y11_32521 5a80d57a5cca6a6698005ab1e16a834b 191 Gene3D G3DSA:3.40.50.880 1 191 7.2E-61 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_32521 5a80d57a5cca6a6698005ab1e16a834b 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 190 4.9E-93 T 13-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Y11_32521 5a80d57a5cca6a6698005ab1e16a834b 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.5E-14 T 13-10-2018 Y11_32521 5a80d57a5cca6a6698005ab1e16a834b 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 7.5E-14 T 13-10-2018 Y11_32521 5a80d57a5cca6a6698005ab1e16a834b 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.5E-14 T 13-10-2018 Y11_32521 5a80d57a5cca6a6698005ab1e16a834b 191 SUPERFAMILY SSF52317 1 190 2.13E-53 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_32521 5a80d57a5cca6a6698005ab1e16a834b 191 PRINTS PR00097 Anthranilate synthase component II signature 168 181 1.5E-36 T 13-10-2018 Y11_32521 5a80d57a5cca6a6698005ab1e16a834b 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.5E-36 T 13-10-2018 Y11_32521 5a80d57a5cca6a6698005ab1e16a834b 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.5E-36 T 13-10-2018 Y11_32521 5a80d57a5cca6a6698005ab1e16a834b 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.5E-36 T 13-10-2018 Y11_32521 5a80d57a5cca6a6698005ab1e16a834b 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.5E-36 T 13-10-2018 Y11_32521 5a80d57a5cca6a6698005ab1e16a834b 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.5E-36 T 13-10-2018 Y11_07911 d0a1162ac8bd49845a74ad5bc8fc2a32 98 Gene3D G3DSA:4.10.520.10 1 98 7.5E-38 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Y11_07911 d0a1162ac8bd49845a74ad5bc8fc2a32 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.046 T 13-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 Y11_07911 d0a1162ac8bd49845a74ad5bc8fc2a32 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 9.9E-31 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_07911 d0a1162ac8bd49845a74ad5bc8fc2a32 98 SUPERFAMILY SSF47729 3 92 2.21E-31 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Y11_07911 d0a1162ac8bd49845a74ad5bc8fc2a32 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Y11_07911 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_07911 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_07911 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_07911 d0a1162ac8bd49845a74ad5bc8fc2a32 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 1.4E-53 T 13-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 Y11_07911 d0a1162ac8bd49845a74ad5bc8fc2a32 98 SMART SM00411 3 92 2.2E-42 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_22511 e00dec6b19ca0558a2b3195870a04085 82 Pfam PF00550 Phosphopantetheine attachment site 9 75 7.3E-9 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain Y11_22511 e00dec6b19ca0558a2b3195870a04085 82 SUPERFAMILY SSF47336 4 80 1.02E-12 T 13-10-2018 IPR036736 ACP-like superfamily Y11_22511 e00dec6b19ca0558a2b3195870a04085 82 Gene3D G3DSA:1.10.1200.10 1 82 2.2E-11 T 13-10-2018 IPR036736 ACP-like superfamily Y11_32021 bffc7f3f67d126cc4ccce1facfe63131 258 Pfam PF00561 alpha/beta hydrolase fold 16 241 2.3E-25 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_32021 bffc7f3f67d126cc4ccce1facfe63131 258 Gene3D G3DSA:3.40.50.1820 1 255 8.9E-75 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_32021 bffc7f3f67d126cc4ccce1facfe63131 258 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 47.132 T 13-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 Y11_32021 bffc7f3f67d126cc4ccce1facfe63131 258 SUPERFAMILY SSF53474 3 252 9.13E-51 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_32021 bffc7f3f67d126cc4ccce1facfe63131 258 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 5.6E-106 T 13-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 Y11_03441 cd0266d6f003ebda57ed510500c2260f 219 SUPERFAMILY SSF56784 1 214 2.23E-27 T 13-10-2018 IPR036412 HAD-like superfamily Y11_03441 cd0266d6f003ebda57ed510500c2260f 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 199 1.3E-47 T 13-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Y11_03441 cd0266d6f003ebda57ed510500c2260f 219 Gene3D G3DSA:1.20.1440.100 15 87 3.5E-64 T 13-10-2018 Y11_03441 cd0266d6f003ebda57ed510500c2260f 219 Gene3D G3DSA:3.40.50.1000 3 213 3.5E-64 T 13-10-2018 IPR023214 HAD superfamily Y11_03441 cd0266d6f003ebda57ed510500c2260f 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 1.3E-33 T 13-10-2018 Y11_03441 cd0266d6f003ebda57ed510500c2260f 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 188 6.9E-26 T 13-10-2018 Y11_17731 fd89b05e8fb41445b5fe08d2aa7a7323 314 SMART SM00382 26 213 2.6E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_17731 fd89b05e8fb41445b5fe08d2aa7a7323 314 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_17731 fd89b05e8fb41445b5fe08d2aa7a7323 314 SUPERFAMILY SSF54631 268 306 9.83E-6 T 13-10-2018 Y11_17731 fd89b05e8fb41445b5fe08d2aa7a7323 314 SUPERFAMILY SSF52540 1 240 9.1E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_17731 fd89b05e8fb41445b5fe08d2aa7a7323 314 Gene3D G3DSA:3.10.580.10 260 309 2.2E-5 T 13-10-2018 Y11_17731 fd89b05e8fb41445b5fe08d2aa7a7323 314 Pfam PF00005 ABC transporter 17 163 2.0E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_17731 fd89b05e8fb41445b5fe08d2aa7a7323 314 Gene3D G3DSA:3.40.50.300 1 259 5.4E-75 T 13-10-2018 Y11_38551 bbc2e765211de08fe4e53055ca495cfe 265 Pfam PF06738 Putative threonine/serine exporter 21 259 1.1E-69 T 13-10-2018 IPR010619 Putative threonine/serine exporter Y11_42151 015af15e2dabec5921c6fd6f446f813a 255 Pfam PF01513 ATP-NAD kinase 23 234 8.5E-72 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Y11_42151 015af15e2dabec5921c6fd6f446f813a 255 Gene3D G3DSA:2.60.200.30 91 227 2.3E-95 T 13-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Y11_42151 015af15e2dabec5921c6fd6f446f813a 255 SUPERFAMILY SSF111331 15 252 1.7E-87 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Y11_42151 015af15e2dabec5921c6fd6f446f813a 255 Gene3D G3DSA:3.40.50.10330 1 250 2.3E-95 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Y11_42151 015af15e2dabec5921c6fd6f446f813a 255 Hamap MF_00361 NAD kinase [nadK]. 4 250 31.096 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Y11_26181 db567ce605158372533e075a2ddc8155 196 Pfam PF13580 SIS domain 9 144 6.7E-33 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_26181 db567ce605158372533e075a2ddc8155 196 SUPERFAMILY SSF53697 2 191 4.85E-51 T 13-10-2018 Y11_26181 db567ce605158372533e075a2ddc8155 196 Gene3D G3DSA:3.40.50.10490 2 196 4.3E-70 T 13-10-2018 Y11_26181 db567ce605158372533e075a2ddc8155 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 61.413 T 13-10-2018 IPR023070 DnaA initiator-associating protein Y11_01531 8875ffcf8437addf073745e0c0496a53 687 SUPERFAMILY SSF51905 266 674 3.37E-29 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_01531 8875ffcf8437addf073745e0c0496a53 687 SUPERFAMILY SSF54373 488 559 2.75E-5 T 13-10-2018 Y11_01531 8875ffcf8437addf073745e0c0496a53 687 Gene3D G3DSA:3.50.50.60 267 672 3.2E-148 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_01531 8875ffcf8437addf073745e0c0496a53 687 Gene3D G3DSA:3.40.50.150 9 253 1.6E-108 T 13-10-2018 Y11_01531 8875ffcf8437addf073745e0c0496a53 687 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 675 7.0E-154 T 13-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 Y11_01531 8875ffcf8437addf073745e0c0496a53 687 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 119 244 4.0E-48 T 13-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 Y11_01531 8875ffcf8437addf073745e0c0496a53 687 Pfam PF01266 FAD dependent oxidoreductase 266 645 1.1E-50 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Y11_01531 8875ffcf8437addf073745e0c0496a53 687 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 670 28.091 T 13-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 Y11_01531 8875ffcf8437addf073745e0c0496a53 687 Gene3D G3DSA:3.30.9.10 351 580 3.2E-148 T 13-10-2018 Y11_22381 04fae35e71960a2af2e7b9908e30e404 139 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 113 1.8E-37 T 13-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 Y11_22381 04fae35e71960a2af2e7b9908e30e404 139 Gene3D G3DSA:3.40.50.510 1 138 3.3E-32 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Y11_22381 04fae35e71960a2af2e7b9908e30e404 139 SUPERFAMILY SSF53062 1 131 7.85E-31 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Y11_22381 04fae35e71960a2af2e7b9908e30e404 139 Pfam PF03610 PTS system fructose IIA component 4 113 8.6E-17 T 13-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 Y11_10801 bf158569124c835844a9b49235437f28 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 13-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Y11_10801 bf158569124c835844a9b49235437f28 268 SUPERFAMILY SSF51366 1 266 8.95E-90 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Y11_10801 bf158569124c835844a9b49235437f28 268 Gene3D G3DSA:3.20.20.70 1 268 5.3E-98 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_10801 bf158569124c835844a9b49235437f28 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.317 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Y11_10801 bf158569124c835844a9b49235437f28 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 1.4E-95 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Y11_10801 bf158569124c835844a9b49235437f28 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 5.2E-103 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Y11_08761 1ee52d6ce2302c98bf252391ad782fe0 354 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 57 342 1.4E-133 T 13-10-2018 IPR006507 Uncharacterised protein family UPF0283 Y11_08761 1ee52d6ce2302c98bf252391ad782fe0 354 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 348 38.908 T 13-10-2018 IPR006507 Uncharacterised protein family UPF0283 Y11_08761 1ee52d6ce2302c98bf252391ad782fe0 354 Pfam PF05128 Domain of unknown function (DUF697) 183 342 8.9E-55 T 13-10-2018 IPR021147 Protein of unknown function DUF697 Y11_24341 b1cc6228fc43ab48f4bf34cf48adbf6a 116 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Y11_24341 b1cc6228fc43ab48f4bf34cf48adbf6a 116 PIRSF PIRSF002889 1 61 1.4E-16 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Y11_24341 b1cc6228fc43ab48f4bf34cf48adbf6a 116 PIRSF PIRSF002889 55 116 7.6E-17 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Y11_24341 b1cc6228fc43ab48f4bf34cf48adbf6a 116 Pfam PF00460 Flagella basal body rod protein 14 39 2.3E-5 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Y11_36541 e7e9603c72d9bc2ef6e812f65ab4f2d8 323 SUPERFAMILY SSF48576 5 322 1.76E-97 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Y11_36541 e7e9603c72d9bc2ef6e812f65ab4f2d8 323 Gene3D G3DSA:1.10.600.10 1 322 4.1E-122 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Y11_36541 e7e9603c72d9bc2ef6e812f65ab4f2d8 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site Y11_36541 e7e9603c72d9bc2ef6e812f65ab4f2d8 323 Pfam PF00348 Polyprenyl synthetase 32 261 2.6E-76 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Y11_36541 e7e9603c72d9bc2ef6e812f65ab4f2d8 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site Y11_37431 aae894b8977f4cda8256287b9e5baf9f 241 SMART SM00382 97 229 2.0E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_37431 aae894b8977f4cda8256287b9e5baf9f 241 Pfam PF01695 IstB-like ATP binding protein 54 228 1.1E-55 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Y11_37431 aae894b8977f4cda8256287b9e5baf9f 241 SUPERFAMILY SSF52540 64 228 3.26E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_37431 aae894b8977f4cda8256287b9e5baf9f 241 PIRSF PIRSF003073 1 241 1.3E-72 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Y11_37431 aae894b8977f4cda8256287b9e5baf9f 241 Gene3D G3DSA:3.40.50.300 61 241 3.9E-41 T 13-10-2018 Y11_35111 4d3a0778465ad93a3aabd64679b3af8a 529 SUPERFAMILY SSF53927 221 529 3.01E-130 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Y11_35111 4d3a0778465ad93a3aabd64679b3af8a 529 Gene3D G3DSA:3.40.140.20 218 374 1.4E-58 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Y11_35111 4d3a0778465ad93a3aabd64679b3af8a 529 Pfam PF02142 MGS-like domain 19 132 6.3E-29 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Y11_35111 4d3a0778465ad93a3aabd64679b3af8a 529 PIRSF PIRSF000414 1 529 2.9E-229 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Y11_35111 4d3a0778465ad93a3aabd64679b3af8a 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 1.9E-263 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Y11_35111 4d3a0778465ad93a3aabd64679b3af8a 529 Gene3D G3DSA:3.40.50.1380 1 200 9.6E-86 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Y11_35111 4d3a0778465ad93a3aabd64679b3af8a 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.781 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Y11_35111 4d3a0778465ad93a3aabd64679b3af8a 529 SMART SM00851 19 132 1.3E-60 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Y11_35111 4d3a0778465ad93a3aabd64679b3af8a 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 3.7E-120 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Y11_35111 4d3a0778465ad93a3aabd64679b3af8a 529 SUPERFAMILY SSF52335 7 196 6.02E-71 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Y11_35111 4d3a0778465ad93a3aabd64679b3af8a 529 Gene3D G3DSA:3.40.140.20 392 529 5.7E-58 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Y11_35111 4d3a0778465ad93a3aabd64679b3af8a 529 SMART SM00798 137 461 5.4E-219 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Y11_31751 69d3c6a0e21c90bf4722270df8820117 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 20 64 2.2E-16 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_31751 69d3c6a0e21c90bf4722270df8820117 343 SUPERFAMILY SSF53822 75 328 1.08E-55 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_31751 69d3c6a0e21c90bf4722270df8820117 343 SUPERFAMILY SSF47413 17 75 7.41E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_31751 69d3c6a0e21c90bf4722270df8820117 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 20 38 - T 13-10-2018 Y11_31751 69d3c6a0e21c90bf4722270df8820117 343 Gene3D G3DSA:3.40.50.2300 79 320 2.0E-63 T 13-10-2018 Y11_31751 69d3c6a0e21c90bf4722270df8820117 343 SMART SM00354 17 87 3.5E-25 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_31751 69d3c6a0e21c90bf4722270df8820117 343 Gene3D G3DSA:3.40.50.2300 173 304 2.0E-63 T 13-10-2018 Y11_31751 69d3c6a0e21c90bf4722270df8820117 343 Gene3D G3DSA:1.10.260.40 12 73 1.1E-15 T 13-10-2018 Y11_31751 69d3c6a0e21c90bf4722270df8820117 343 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 76 318 2.0E-31 T 13-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain Y11_31431 6bd4fd3afac3c4e4830e569277f82f06 413 Gene3D G3DSA:3.40.390.10 21 208 2.2E-110 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Y11_31431 6bd4fd3afac3c4e4830e569277f82f06 413 SMART SM00235 41 206 2.9E-6 T 13-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 Y11_31431 6bd4fd3afac3c4e4830e569277f82f06 413 Pfam PF08548 Peptidase M10 serralysin C terminal 202 406 4.7E-59 T 13-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 Y11_31431 6bd4fd3afac3c4e4830e569277f82f06 413 SUPERFAMILY SSF51120 208 404 1.57E-27 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_31431 6bd4fd3afac3c4e4830e569277f82f06 413 Gene3D G3DSA:2.150.10.10 209 396 2.2E-110 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_31431 6bd4fd3afac3c4e4830e569277f82f06 413 SUPERFAMILY SSF55486 26 204 6.19E-32 T 13-10-2018 Y11_31431 6bd4fd3afac3c4e4830e569277f82f06 413 PRINTS PR00313 NodO calcium binding signature 278 286 1.1E-5 T 13-10-2018 Y11_31431 6bd4fd3afac3c4e4830e569277f82f06 413 PRINTS PR00313 NodO calcium binding signature 305 314 1.1E-5 T 13-10-2018 Y11_31431 6bd4fd3afac3c4e4830e569277f82f06 413 PRINTS PR00313 NodO calcium binding signature 207 218 1.1E-5 T 13-10-2018 Y11_31431 6bd4fd3afac3c4e4830e569277f82f06 413 PRINTS PR00313 NodO calcium binding signature 296 304 1.1E-5 T 13-10-2018 Y11_33671 568ac43aa0ed1006e2c0929d4307c879 365 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 28.992 T 13-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 Y11_33671 568ac43aa0ed1006e2c0929d4307c879 365 Pfam PF00953 Glycosyl transferase family 4 75 232 5.9E-27 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Y11_33671 568ac43aa0ed1006e2c0929d4307c879 365 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 350 2.9E-164 T 13-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 Y11_01741 ae629083d3126ae5e4d4acf5437d9147 295 SUPERFAMILY SSF103481 44 140 1.44E-10 T 13-10-2018 Y11_01741 ae629083d3126ae5e4d4acf5437d9147 295 SUPERFAMILY SSF103481 189 285 7.06E-14 T 13-10-2018 Y11_01741 ae629083d3126ae5e4d4acf5437d9147 295 Pfam PF00892 EamA-like transporter family 5 137 3.5E-18 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_01741 ae629083d3126ae5e4d4acf5437d9147 295 Pfam PF00892 EamA-like transporter family 152 282 1.7E-20 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_21321 fe96364225a5ec27c5f0a7f460d7e922 486 Pfam PF01546 Peptidase family M20/M25/M40 72 480 2.0E-20 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 Y11_21321 fe96364225a5ec27c5f0a7f460d7e922 486 Gene3D G3DSA:3.40.630.10 377 486 7.6E-24 T 13-10-2018 Y11_21321 fe96364225a5ec27c5f0a7f460d7e922 486 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 4.9E-98 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Y11_21321 fe96364225a5ec27c5f0a7f460d7e922 486 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 4.9E-98 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Y11_21321 fe96364225a5ec27c5f0a7f460d7e922 486 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 4.9E-98 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Y11_21321 fe96364225a5ec27c5f0a7f460d7e922 486 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 4.9E-98 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Y11_21321 fe96364225a5ec27c5f0a7f460d7e922 486 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 4.9E-98 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Y11_21321 fe96364225a5ec27c5f0a7f460d7e922 486 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 4.9E-98 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Y11_21321 fe96364225a5ec27c5f0a7f460d7e922 486 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 4.9E-98 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Y11_21321 fe96364225a5ec27c5f0a7f460d7e922 486 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 4.9E-98 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Y11_21321 fe96364225a5ec27c5f0a7f460d7e922 486 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 4.9E-98 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Y11_21321 fe96364225a5ec27c5f0a7f460d7e922 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 1.1E-181 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Y11_21321 fe96364225a5ec27c5f0a7f460d7e922 486 SUPERFAMILY SSF53187 10 482 2.1E-65 T 13-10-2018 Y11_21321 fe96364225a5ec27c5f0a7f460d7e922 486 Pfam PF07687 Peptidase dimerisation domain 200 292 4.1E-6 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain Y11_21321 fe96364225a5ec27c5f0a7f460d7e922 486 Gene3D G3DSA:3.40.630.10 1 230 1.2E-63 T 13-10-2018 Y11_21321 fe96364225a5ec27c5f0a7f460d7e922 486 PIRSF PIRSF016599 1 485 1.8E-212 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Y11_34761 4a3f793c55fe629eded08eb1ac858ff3 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 58.069 T 13-10-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 Y11_34761 4a3f793c55fe629eded08eb1ac858ff3 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 13-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Y11_34761 4a3f793c55fe629eded08eb1ac858ff3 443 Gene3D G3DSA:3.40.350.10 1 159 1.7E-62 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Y11_34761 4a3f793c55fe629eded08eb1ac858ff3 443 Pfam PF00557 Metallopeptidase family M24 168 430 1.5E-41 T 13-10-2018 IPR000994 Peptidase M24 Y11_34761 4a3f793c55fe629eded08eb1ac858ff3 443 Gene3D G3DSA:3.90.230.10 161 443 3.0E-76 T 13-10-2018 Y11_34761 4a3f793c55fe629eded08eb1ac858ff3 443 SUPERFAMILY SSF55920 163 439 2.22E-53 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like Y11_01621 227b8acd504afa2575dfd25cab1037ab 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 2.4E-19 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Y11_01621 227b8acd504afa2575dfd25cab1037ab 104 SUPERFAMILY SSF52794 1 101 8.37E-36 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Y11_01621 227b8acd504afa2575dfd25cab1037ab 104 Gene3D G3DSA:3.40.50.2300 2 104 1.1E-34 T 13-10-2018 Y11_10111 956ca73d730c5ea288f726b709c8202c 571 SUPERFAMILY SSF53067 20 299 1.96E-23 T 13-10-2018 Y11_10111 956ca73d730c5ea288f726b709c8202c 571 SUPERFAMILY SSF53067 300 559 2.59E-46 T 13-10-2018 Y11_10111 956ca73d730c5ea288f726b709c8202c 571 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 17 563 2.8E-227 T 13-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 Y11_10111 956ca73d730c5ea288f726b709c8202c 571 Gene3D G3DSA:3.30.420.460 351 552 2.6E-122 T 13-10-2018 Y11_10111 956ca73d730c5ea288f726b709c8202c 571 PIRSF PIRSF000538 16 570 7.4E-42 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Y11_10111 956ca73d730c5ea288f726b709c8202c 571 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 19 157 1.7E-6 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Y11_10111 956ca73d730c5ea288f726b709c8202c 571 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 306 516 1.5E-37 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Y11_10111 956ca73d730c5ea288f726b709c8202c 571 Gene3D G3DSA:3.30.420.40 20 541 2.6E-122 T 13-10-2018 Y11_10111 956ca73d730c5ea288f726b709c8202c 571 Hamap MF_00520 Ribulokinase [araB]. 16 571 51.389 T 13-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 Y11_42881 6e4557ebb59eea711ec1ca0a8c993e2d 397 Gene3D G3DSA:1.10.150.530 1 91 7.7E-30 T 13-10-2018 Y11_42881 6e4557ebb59eea711ec1ca0a8c993e2d 397 Pfam PF04055 Radical SAM superfamily 133 302 4.5E-17 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_42881 6e4557ebb59eea711ec1ca0a8c993e2d 397 PIRSF PIRSF006004 24 390 4.9E-147 T 13-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 Y11_42881 6e4557ebb59eea711ec1ca0a8c993e2d 397 SUPERFAMILY SSF102114 129 347 1.15E-14 T 13-10-2018 Y11_42881 6e4557ebb59eea711ec1ca0a8c993e2d 397 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 30 377 74.238 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Y11_42881 6e4557ebb59eea711ec1ca0a8c993e2d 397 Gene3D G3DSA:3.20.20.70 92 362 2.7E-113 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_42881 6e4557ebb59eea711ec1ca0a8c993e2d 397 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 28 382 2.2E-170 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Y11_00411 06de37db23634020da3bb60206bede15 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 4.9E-99 T 13-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Y11_00411 06de37db23634020da3bb60206bede15 759 Gene3D G3DSA:3.40.50.10380 1 160 5.9E-68 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Y11_00411 06de37db23634020da3bb60206bede15 759 SMART SM01274 18 151 2.7E-79 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Y11_00411 06de37db23634020da3bb60206bede15 759 SMART SM00919 163 401 2.2E-141 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Y11_00411 06de37db23634020da3bb60206bede15 759 PIRSF PIRSF036684 1 758 0.0 T 13-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 Y11_00411 06de37db23634020da3bb60206bede15 759 SUPERFAMILY SSF51735 163 453 2.6E-86 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_00411 06de37db23634020da3bb60206bede15 759 Gene3D G3DSA:3.40.50.10750 573 727 1.5E-92 T 13-10-2018 Y11_00411 06de37db23634020da3bb60206bede15 759 Gene3D G3DSA:3.40.50.720 161 446 1.6E-81 T 13-10-2018 Y11_00411 06de37db23634020da3bb60206bede15 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 13-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 Y11_00411 06de37db23634020da3bb60206bede15 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 359 5.1E-17 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Y11_00411 06de37db23634020da3bb60206bede15 759 SUPERFAMILY SSF53223 10 161 2.09E-52 T 13-10-2018 Y11_00411 06de37db23634020da3bb60206bede15 759 SUPERFAMILY SSF53659 430 754 4.52E-91 T 13-10-2018 Y11_00411 06de37db23634020da3bb60206bede15 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 3.7E-27 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Y11_00411 06de37db23634020da3bb60206bede15 759 Gene3D G3DSA:3.40.50.10950 447 751 1.5E-92 T 13-10-2018 Y11_34891 3f0db8b79c3aa21e2123b26b5ffd87e7 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 1.1E-70 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Y11_34891 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SMART SM00738 6 115 2.0E-50 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Y11_34891 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Pfam PF02357 Transcription termination factor nusG 7 112 2.1E-27 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Y11_34891 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.616 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Y11_34891 3f0db8b79c3aa21e2123b26b5ffd87e7 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 13-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Y11_34891 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Gene3D G3DSA:3.30.70.940 1 121 6.5E-48 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Y11_34891 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Gene3D G3DSA:2.30.30.30 122 180 2.3E-26 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Y11_34891 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Pfam PF00467 KOW motif 130 162 9.5E-8 T 13-10-2018 IPR005824 KOW Y11_34891 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SUPERFAMILY SSF50104 125 180 1.15E-19 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Y11_34891 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SMART SM00739 127 154 2.0E-6 T 13-10-2018 IPR005824 KOW Y11_34891 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Y11_34891 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Y11_34891 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Y11_34891 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SUPERFAMILY SSF82679 6 116 3.4E-40 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Y11_10681 b1c555f795fcde79da97190d6204dfc3 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Y11_10681 b1c555f795fcde79da97190d6204dfc3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 6.3E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_10681 b1c555f795fcde79da97190d6204dfc3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 6.3E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_10681 b1c555f795fcde79da97190d6204dfc3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 6.3E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_10681 b1c555f795fcde79da97190d6204dfc3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 6.3E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_10681 b1c555f795fcde79da97190d6204dfc3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 6.3E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_10681 b1c555f795fcde79da97190d6204dfc3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 6.3E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_10681 b1c555f795fcde79da97190d6204dfc3 253 Pfam PF00106 short chain dehydrogenase 14 210 1.5E-50 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_10681 b1c555f795fcde79da97190d6204dfc3 253 SUPERFAMILY SSF51735 10 243 3.29E-61 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_10681 b1c555f795fcde79da97190d6204dfc3 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 199 0.0042 T 13-10-2018 Y11_10681 b1c555f795fcde79da97190d6204dfc3 253 Gene3D G3DSA:3.40.50.720 1 249 4.7E-72 T 13-10-2018 Y11_28211 548cf8940ed2eeeece5db3acc102c389 174 Pfam PF00227 Proteasome subunit 2 165 4.0E-22 T 13-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Y11_28211 548cf8940ed2eeeece5db3acc102c389 174 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.706 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Y11_28211 548cf8940ed2eeeece5db3acc102c389 174 PIRSF PIRSF039093 1 174 9.4E-88 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Y11_28211 548cf8940ed2eeeece5db3acc102c389 174 SUPERFAMILY SSF56235 2 172 3.66E-58 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_28211 548cf8940ed2eeeece5db3acc102c389 174 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 1.4E-86 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Y11_28211 548cf8940ed2eeeece5db3acc102c389 174 Gene3D G3DSA:3.60.20.10 1 173 2.7E-67 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_43101 cf5ffee14f7104b3a5bfcf76009639ce 263 Pfam PF01548 Transposase 16 156 2.5E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_43101 cf5ffee14f7104b3a5bfcf76009639ce 263 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 256 2.6E-6 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_23311 59c522b510c15cda6bb9f6c33a4e150c 140 Gene3D G3DSA:3.30.420.140 2 139 1.2E-46 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Y11_23311 59c522b510c15cda6bb9f6c33a4e150c 140 Pfam PF03652 Holliday junction resolvase 5 137 5.1E-43 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Y11_23311 59c522b510c15cda6bb9f6c33a4e150c 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 8 136 5.5E-58 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Y11_23311 59c522b510c15cda6bb9f6c33a4e150c 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 26.128 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Y11_23311 59c522b510c15cda6bb9f6c33a4e150c 140 SUPERFAMILY SSF53098 4 137 8.8E-43 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_23311 59c522b510c15cda6bb9f6c33a4e150c 140 SMART SM00732 4 104 1.2E-42 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Y11_33051 58c42f57a3daae6651d63045c445eb25 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 2.5E-26 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_33051 58c42f57a3daae6651d63045c445eb25 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 8.8E-20 T 13-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Y11_33051 58c42f57a3daae6651d63045c445eb25 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 13-10-2018 IPR018038 Ribosomal protein L30, conserved site Y11_33051 58c42f57a3daae6651d63045c445eb25 59 PIRSF PIRSF002211 1 59 3.5E-28 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_33051 58c42f57a3daae6651d63045c445eb25 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.06 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_33051 58c42f57a3daae6651d63045c445eb25 59 Gene3D G3DSA:3.30.1390.20 1 59 7.9E-27 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Y11_33051 58c42f57a3daae6651d63045c445eb25 59 SUPERFAMILY SSF55129 3 59 1.7E-21 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Y11_27141 848518961cfbdb5db3798bf3ff69c37b 347 SUPERFAMILY SSF53067 153 340 4.08E-50 T 13-10-2018 Y11_27141 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Y11_27141 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Y11_27141 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Y11_27141 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Y11_27141 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Y11_27141 848518961cfbdb5db3798bf3ff69c37b 347 Pfam PF06723 MreB/Mbl protein 11 338 9.8E-150 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Y11_27141 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 158 321 6.2E-130 T 13-10-2018 Y11_27141 848518961cfbdb5db3798bf3ff69c37b 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 13-10-2018 Y11_27141 848518961cfbdb5db3798bf3ff69c37b 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.1E-170 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Y11_27141 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 14 331 6.2E-130 T 13-10-2018 Y11_27141 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.90.640.10 190 263 6.2E-130 T 13-10-2018 Y11_27781 20ba3945604316da20c63becb21bdd84 307 Gene3D G3DSA:1.20.1530.20 1 307 2.1E-121 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily Y11_27781 20ba3945604316da20c63becb21bdd84 307 Pfam PF01758 Sodium Bile acid symporter family 36 213 4.9E-41 T 13-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Y11_28091 6a03647df8d4b459de6b020fafede9c3 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 2.0E-127 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Y11_28091 6a03647df8d4b459de6b020fafede9c3 334 SMART SM00859 3 146 2.8E-52 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Y11_28091 6a03647df8d4b459de6b020fafede9c3 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 1.6E-13 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Y11_28091 6a03647df8d4b459de6b020fafede9c3 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 13-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Y11_28091 6a03647df8d4b459de6b020fafede9c3 334 Gene3D G3DSA:3.40.50.720 6 330 5.6E-128 T 13-10-2018 Y11_28091 6a03647df8d4b459de6b020fafede9c3 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 40.063 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Y11_28091 6a03647df8d4b459de6b020fafede9c3 334 Gene3D G3DSA:3.30.360.10 153 312 5.6E-128 T 13-10-2018 Y11_28091 6a03647df8d4b459de6b020fafede9c3 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 3.7E-34 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Y11_28091 6a03647df8d4b459de6b020fafede9c3 334 SUPERFAMILY SSF51735 2 183 2.03E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_28091 6a03647df8d4b459de6b020fafede9c3 334 SUPERFAMILY SSF55347 154 308 2.15E-50 T 13-10-2018 Y11_35061 173347327b90ae9860c44364107acd50 234 Pfam PF04493 Endonuclease V 15 207 4.5E-73 T 13-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 Y11_35061 173347327b90ae9860c44364107acd50 234 Hamap MF_00801 Endonuclease V [nfi]. 3 217 33.527 T 13-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 Y11_35061 173347327b90ae9860c44364107acd50 234 Gene3D G3DSA:3.30.2170.10 1 215 1.1E-82 T 13-10-2018 Y11_06951 638e28e26502061b8cf46f2dc8ee9f56 208 SUPERFAMILY SSF50447 3 73 1.84E-12 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Y11_06951 638e28e26502061b8cf46f2dc8ee9f56 208 Gene3D G3DSA:3.30.980.10 84 158 4.8E-6 T 13-10-2018 Y11_06951 638e28e26502061b8cf46f2dc8ee9f56 208 Gene3D G3DSA:3.30.980.10 159 207 1.3E-6 T 13-10-2018 Y11_06951 638e28e26502061b8cf46f2dc8ee9f56 208 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 165 198 2.7E-4 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Y11_06951 638e28e26502061b8cf46f2dc8ee9f56 208 Gene3D G3DSA:2.40.30.130 1 78 1.4E-16 T 13-10-2018 Y11_06951 638e28e26502061b8cf46f2dc8ee9f56 208 SUPERFAMILY SSF55186 84 202 1.01E-23 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Y11_06951 638e28e26502061b8cf46f2dc8ee9f56 208 Pfam PF01411 tRNA synthetases class II (A) 23 65 2.2E-5 T 13-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Y11_24041 c213f287d08ec215228c61bc77cc566b 342 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 150 161 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_24041 c213f287d08ec215228c61bc77cc566b 342 SUPERFAMILY SSF54862 37 330 3.52E-69 T 13-10-2018 Y11_24041 c213f287d08ec215228c61bc77cc566b 342 Pfam PF13247 4Fe-4S dicluster domain 111 212 1.4E-22 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_24041 c213f287d08ec215228c61bc77cc566b 342 Gene3D G3DSA:3.30.70.20 35 267 2.5E-49 T 13-10-2018 Y11_24041 c213f287d08ec215228c61bc77cc566b 342 Gene3D G3DSA:3.30.70.20 34 181 2.5E-49 T 13-10-2018 Y11_15381 f5c5465b36874bd86a81066ef0858258 525 SUPERFAMILY SSF55785 209 303 4.79E-9 T 13-10-2018 IPR035965 PAS domain superfamily Y11_15381 f5c5465b36874bd86a81066ef0858258 525 SUPERFAMILY SSF55874 393 522 3.41E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_15381 f5c5465b36874bd86a81066ef0858258 525 SMART SM00091 207 275 3.7E-7 T 13-10-2018 IPR000014 PAS domain Y11_15381 f5c5465b36874bd86a81066ef0858258 525 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 483 1.3E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_15381 f5c5465b36874bd86a81066ef0858258 525 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 522 1.3E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_15381 f5c5465b36874bd86a81066ef0858258 525 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 503 1.3E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_15381 f5c5465b36874bd86a81066ef0858258 525 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 469 1.3E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_15381 f5c5465b36874bd86a81066ef0858258 525 Gene3D G3DSA:3.30.450.20 27 158 6.1E-39 T 13-10-2018 Y11_15381 f5c5465b36874bd86a81066ef0858258 525 SMART SM00387 414 525 9.8E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_15381 f5c5465b36874bd86a81066ef0858258 525 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 316 360 4.8E-7 T 13-10-2018 IPR039506 SpoOB, alpha-helical domain Y11_15381 f5c5465b36874bd86a81066ef0858258 525 Pfam PF17203 Single cache domain 3 47 158 4.3E-16 T 13-10-2018 IPR033463 Single cache domain 3 Y11_15381 f5c5465b36874bd86a81066ef0858258 525 Gene3D G3DSA:3.30.450.20 193 307 3.8E-14 T 13-10-2018 Y11_15381 f5c5465b36874bd86a81066ef0858258 525 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 417 524 2.9E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_15381 f5c5465b36874bd86a81066ef0858258 525 SUPERFAMILY SSF55890 318 361 3.01E-7 T 13-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 Y11_15381 f5c5465b36874bd86a81066ef0858258 525 SUPERFAMILY SSF103190 32 160 7.46E-33 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Y11_15381 f5c5465b36874bd86a81066ef0858258 525 Gene3D G3DSA:3.30.565.10 363 523 6.8E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_04351 d6758be452356395971d4302c86b32ac 261 SUPERFAMILY SSF53335 4 255 8.75E-37 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_04351 d6758be452356395971d4302c86b32ac 261 Pfam PF13847 Methyltransferase domain 44 147 4.5E-19 T 13-10-2018 IPR025714 Methyltransferase domain Y11_04351 d6758be452356395971d4302c86b32ac 261 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 255 41.765 T 13-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 Y11_04351 d6758be452356395971d4302c86b32ac 261 Gene3D G3DSA:3.40.50.150 8 261 1.8E-69 T 13-10-2018 Y11_11861 2406f1d42041560e7500a2f528be66fe 160 Pfam PF00293 NUDIX domain 21 148 4.1E-17 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Y11_11861 2406f1d42041560e7500a2f528be66fe 160 PRINTS PR01404 DATP pyrophosphohydrolase signature 16 33 2.3E-46 T 13-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 Y11_11861 2406f1d42041560e7500a2f528be66fe 160 PRINTS PR01404 DATP pyrophosphohydrolase signature 84 103 2.3E-46 T 13-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 Y11_11861 2406f1d42041560e7500a2f528be66fe 160 PRINTS PR01404 DATP pyrophosphohydrolase signature 33 54 2.3E-46 T 13-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 Y11_11861 2406f1d42041560e7500a2f528be66fe 160 PRINTS PR01404 DATP pyrophosphohydrolase signature 112 133 2.3E-46 T 13-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 Y11_11861 2406f1d42041560e7500a2f528be66fe 160 PRINTS PR01404 DATP pyrophosphohydrolase signature 139 152 2.3E-46 T 13-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 Y11_11861 2406f1d42041560e7500a2f528be66fe 160 Gene3D G3DSA:3.90.79.10 11 160 2.1E-42 T 13-10-2018 Y11_11861 2406f1d42041560e7500a2f528be66fe 160 ProSitePatterns PS00893 Nudix box signature. 51 72 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Y11_11861 2406f1d42041560e7500a2f528be66fe 160 SUPERFAMILY SSF55811 14 157 3.52E-25 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Y11_00481 edd18c11c970dcf41fedd312a80ecb8d 137 Pfam PF04076 Bacterial OB fold (BOF) protein 30 135 8.1E-36 T 13-10-2018 IPR005220 Bacterial OB-fold Y11_00481 edd18c11c970dcf41fedd312a80ecb8d 137 Gene3D G3DSA:2.40.50.200 27 137 1.3E-42 T 13-10-2018 IPR036700 Bacterial OB-fold superfamily Y11_00481 edd18c11c970dcf41fedd312a80ecb8d 137 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 136 3.1E-43 T 13-10-2018 IPR016052 Bacteriophage 933W, L0136 Y11_00481 edd18c11c970dcf41fedd312a80ecb8d 137 SUPERFAMILY SSF101756 40 135 3.53E-35 T 13-10-2018 IPR036700 Bacterial OB-fold superfamily Y11_21891 9d513660c1fdefb6256831cd8bca9560 113 PIRSF PIRSF034456 7 113 2.8E-54 T 13-10-2018 IPR017028 Uncharacterised conserved protein UCP034456 Y11_21891 9d513660c1fdefb6256831cd8bca9560 113 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 31 109 1.5E-7 T 13-10-2018 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein Y11_12441 21fb5d5e7da3351cb85ff84af2d3c14d 196 Gene3D G3DSA:3.15.10.40 26 196 2.2E-70 T 13-10-2018 Y11_12441 21fb5d5e7da3351cb85ff84af2d3c14d 196 Pfam PF07273 Protein of unknown function (DUF1439) 38 189 1.6E-57 T 13-10-2018 IPR010835 Protein of unknown function DUF1439 Y11_18531 2c59852ee5b3c271010cc5463ba8a32c 45 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.8E-15 T 13-10-2018 IPR012994 Membrane bound YbgT-like Y11_18531 2c59852ee5b3c271010cc5463ba8a32c 45 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 8.3E-20 T 13-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 Y11_22071 a589ca72213566fd140ba11f16025406 82 SUPERFAMILY SSF54565 1 76 1.83E-28 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_22071 a589ca72213566fd140ba11f16025406 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.924 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_22071 a589ca72213566fd140ba11f16025406 82 Gene3D G3DSA:3.30.1320.10 1 82 4.4E-30 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_22071 a589ca72213566fd140ba11f16025406 82 Pfam PF00886 Ribosomal protein S16 8 68 1.4E-23 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_22071 a589ca72213566fd140ba11f16025406 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 13-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_22071 a589ca72213566fd140ba11f16025406 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 4.0E-29 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_12231 41bcb9c4a9c1f6e15fe3ef6757560199 154 Pfam PF04996 Succinylarginine dihydrolase 1 152 1.5E-67 T 13-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 Y11_12231 41bcb9c4a9c1f6e15fe3ef6757560199 154 SUPERFAMILY SSF55909 1 152 1.45E-63 T 13-10-2018 Y11_12231 41bcb9c4a9c1f6e15fe3ef6757560199 154 Gene3D G3DSA:3.75.10.20 1 154 9.3E-67 T 13-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 Y11_29831 18169a6442a0b9d443c7b2bf27ae00de 240 Gene3D G3DSA:1.20.58.220 119 236 5.2E-32 T 13-10-2018 IPR038078 PhoU-like domain superfamily Y11_29831 18169a6442a0b9d443c7b2bf27ae00de 240 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 9.8E-74 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Y11_29831 18169a6442a0b9d443c7b2bf27ae00de 240 SUPERFAMILY SSF109755 13 230 1.57E-70 T 13-10-2018 Y11_29831 18169a6442a0b9d443c7b2bf27ae00de 240 PIRSF PIRSF003107 7 226 2.8E-68 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Y11_29831 18169a6442a0b9d443c7b2bf27ae00de 240 Gene3D G3DSA:1.20.58.220 1 118 6.8E-43 T 13-10-2018 IPR038078 PhoU-like domain superfamily Y11_29831 18169a6442a0b9d443c7b2bf27ae00de 240 Pfam PF01895 PhoU domain 128 212 4.8E-17 T 13-10-2018 IPR026022 PhoU domain Y11_29831 18169a6442a0b9d443c7b2bf27ae00de 240 Pfam PF01895 PhoU domain 26 111 1.5E-22 T 13-10-2018 IPR026022 PhoU domain Y11_25491 351689c95c8fc1af428d5ede5b52c192 90 Pfam PF10809 Protein of unknown function (DUF2732) 27 88 3.8E-17 T 13-10-2018 IPR020126 Protein of unknown function DUF2732 Y11_25491 351689c95c8fc1af428d5ede5b52c192 90 ProDom PD057914 C0939 STY4639 GPA GP33 PRECURSOR FELS-2 5'REGION STY3665 SIGNAL PHAGE-RELATED 29 90 5.0E-22 T 13-10-2018 IPR020126 Protein of unknown function DUF2732 Y11_13801 d8d502f6a7a93bd41b0a5acd6fc71a71 199 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 199 45.837 T 13-10-2018 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 Y11_13801 d8d502f6a7a93bd41b0a5acd6fc71a71 199 Pfam PF03358 NADPH-dependent FMN reductase 13 143 6.1E-13 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Y11_13801 d8d502f6a7a93bd41b0a5acd6fc71a71 199 Gene3D G3DSA:3.40.50.360 1 199 1.6E-77 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_13801 d8d502f6a7a93bd41b0a5acd6fc71a71 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 197 1.6E-99 T 13-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 Y11_13801 d8d502f6a7a93bd41b0a5acd6fc71a71 199 SUPERFAMILY SSF52218 1 197 1.57E-61 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_41691 2a87be951f9f5e5360ee4d71855f0ca3 70 SUPERFAMILY SSF50249 3 69 1.49E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_41691 2a87be951f9f5e5360ee4d71855f0ca3 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 13-10-2018 IPR019844 Cold-shock conserved site Y11_41691 2a87be951f9f5e5360ee4d71855f0ca3 70 SMART SM00357 6 70 3.3E-31 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Y11_41691 2a87be951f9f5e5360ee4d71855f0ca3 70 PRINTS PR00050 Cold shock protein signature 43 61 6.3E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_41691 2a87be951f9f5e5360ee4d71855f0ca3 70 PRINTS PR00050 Cold shock protein signature 7 22 6.3E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_41691 2a87be951f9f5e5360ee4d71855f0ca3 70 PRINTS PR00050 Cold shock protein signature 28 37 6.3E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_41691 2a87be951f9f5e5360ee4d71855f0ca3 70 Gene3D G3DSA:2.40.50.140 2 69 4.4E-29 T 13-10-2018 Y11_41691 2a87be951f9f5e5360ee4d71855f0ca3 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.9E-32 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_41691 2a87be951f9f5e5360ee4d71855f0ca3 70 PIRSF PIRSF002599 1 70 2.1E-24 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 Y11_09411 fa1888d7226b145c34f8189c41198788 374 SUPERFAMILY SSF53167 3 374 3.59E-127 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Y11_09411 fa1888d7226b145c34f8189c41198788 374 Pfam PF01048 Phosphorylase superfamily 159 321 1.5E-18 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Y11_09411 fa1888d7226b145c34f8189c41198788 374 Gene3D G3DSA:3.40.50.1580 63 374 9.3E-114 T 13-10-2018 Y11_09411 fa1888d7226b145c34f8189c41198788 374 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 3 374 1.4E-191 T 13-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 Y11_09411 fa1888d7226b145c34f8189c41198788 374 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 2 54 7.6E-12 T 13-10-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 Y11_09411 fa1888d7226b145c34f8189c41198788 374 Gene3D G3DSA:3.30.1730.10 1 62 6.1E-13 T 13-10-2018 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 Y11_37071 a220a790b5b33ee2d8b2e0ab7b6fab59 268 PIRSF PIRSF037116 4 268 1.0E-142 T 13-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK Y11_37071 a220a790b5b33ee2d8b2e0ab7b6fab59 268 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 15 266 2.0E-119 T 13-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK Y11_37071 a220a790b5b33ee2d8b2e0ab7b6fab59 268 SUPERFAMILY SSF52540 11 264 2.01E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_37071 a220a790b5b33ee2d8b2e0ab7b6fab59 268 Pfam PF00005 ABC transporter 33 189 2.4E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_37071 a220a790b5b33ee2d8b2e0ab7b6fab59 268 SMART SM00382 41 239 1.0E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_37071 a220a790b5b33ee2d8b2e0ab7b6fab59 268 Gene3D G3DSA:3.40.50.300 14 268 2.9E-67 T 13-10-2018 Y11_37071 a220a790b5b33ee2d8b2e0ab7b6fab59 268 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_40731 56a40a1d515d271cb818b29136b7b20f 128 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 43 123 6.2E-20 T 13-10-2018 IPR022204 Prepilin peptidase dependent protein C Y11_40731 56a40a1d515d271cb818b29136b7b20f 128 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 19 39 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Y11_25581 0887d21b36a5496bf2789ddaf24ea11a 623 SUPERFAMILY SSF51445 25 419 2.74E-83 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_25581 0887d21b36a5496bf2789ddaf24ea11a 623 Gene3D G3DSA:3.40.50.1700 415 622 2.7E-27 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Y11_25581 0887d21b36a5496bf2789ddaf24ea11a 623 PRINTS PR00133 Glycosyl hydrolase family 3 signature 139 158 1.2E-5 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Y11_25581 0887d21b36a5496bf2789ddaf24ea11a 623 PRINTS PR00133 Glycosyl hydrolase family 3 signature 303 321 1.2E-5 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Y11_25581 0887d21b36a5496bf2789ddaf24ea11a 623 PRINTS PR00133 Glycosyl hydrolase family 3 signature 217 233 1.2E-5 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Y11_25581 0887d21b36a5496bf2789ddaf24ea11a 623 PRINTS PR00133 Glycosyl hydrolase family 3 signature 114 130 1.2E-5 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Y11_25581 0887d21b36a5496bf2789ddaf24ea11a 623 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 303 320 - T 13-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 Y11_25581 0887d21b36a5496bf2789ddaf24ea11a 623 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 45 389 1.2E-84 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Y11_25581 0887d21b36a5496bf2789ddaf24ea11a 623 Gene3D G3DSA:3.20.20.300 31 414 4.7E-120 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Y11_25071 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_25071 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_25071 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_25071 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_25071 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 13-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_25071 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 6.3E-22 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_25071 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_25071 e0f63aa874b218a4c9d359851efe3e90 71 Gene3D G3DSA:1.20.5.1150 16 54 2.1E-21 T 13-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_25071 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_25071 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_13941 5744ad8e037f4840988e2d5713ca31dc 251 SUPERFAMILY SSF52540 4 243 1.9E-79 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_13941 5744ad8e037f4840988e2d5713ca31dc 251 Pfam PF00005 ABC transporter 19 173 3.5E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_13941 5744ad8e037f4840988e2d5713ca31dc 251 PIRSF PIRSF039085 1 249 2.9E-111 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Y11_13941 5744ad8e037f4840988e2d5713ca31dc 251 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_13941 5744ad8e037f4840988e2d5713ca31dc 251 SMART SM00382 28 221 1.8E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_13941 5744ad8e037f4840988e2d5713ca31dc 251 Gene3D G3DSA:3.40.50.300 2 251 7.7E-83 T 13-10-2018 Y11_11241 627ec5156a80e0e3f503144b250a34e8 219 Pfam PF00857 Isochorismatase family 4 205 1.1E-34 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 Y11_11241 627ec5156a80e0e3f503144b250a34e8 219 SUPERFAMILY SSF52499 2 211 1.24E-52 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Y11_11241 627ec5156a80e0e3f503144b250a34e8 219 Gene3D G3DSA:3.40.50.850 1 210 3.9E-63 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Y11_38051 bad327e98c19487fb885573944e32c20 265 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 17 238 1.5E-80 T 13-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Y11_38051 bad327e98c19487fb885573944e32c20 265 SUPERFAMILY SSF51569 13 252 5.44E-80 T 13-10-2018 Y11_38051 bad327e98c19487fb885573944e32c20 265 PIRSF PIRSF001357 11 261 2.9E-78 T 13-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Y11_38051 bad327e98c19487fb885573944e32c20 265 SMART SM01133 16 252 2.0E-77 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Y11_38051 bad327e98c19487fb885573944e32c20 265 Pfam PF01791 DeoC/LacD family aldolase 18 246 1.2E-46 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Y11_38051 bad327e98c19487fb885573944e32c20 265 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 7 265 52.495 T 13-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 Y11_38051 bad327e98c19487fb885573944e32c20 265 Gene3D G3DSA:3.20.20.70 7 265 5.8E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_32231 bb8d5d9bdc5e18daf1dfc2309cb004f4 363 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 24 352 8.0E-165 T 13-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 Y11_32231 bb8d5d9bdc5e18daf1dfc2309cb004f4 363 Pfam PF07095 Intracellular growth attenuator protein IgaA 2 358 3.2E-191 T 13-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 Y11_14111 2492049fed94bc979d0b08c7429302bf 987 SUPERFAMILY SSF109604 603 684 3.14E-8 T 13-10-2018 Y11_14111 2492049fed94bc979d0b08c7429302bf 987 Gene3D G3DSA:3.30.450.20 231 323 3.0E-11 T 13-10-2018 Y11_14111 2492049fed94bc979d0b08c7429302bf 987 Pfam PF13487 HD domain 834 899 8.7E-21 T 13-10-2018 Y11_14111 2492049fed94bc979d0b08c7429302bf 987 Gene3D G3DSA:3.30.450.40 429 590 2.1E-7 T 13-10-2018 IPR029016 GAF-like domain superfamily Y11_14111 2492049fed94bc979d0b08c7429302bf 987 Gene3D G3DSA:1.20.1480.50 336 428 4.4E-10 T 13-10-2018 Y11_14111 2492049fed94bc979d0b08c7429302bf 987 SUPERFAMILY SSF109604 836 942 1.79E-6 T 13-10-2018 Y11_14111 2492049fed94bc979d0b08c7429302bf 987 Gene3D G3DSA:1.10.3210.10 591 700 3.6E-18 T 13-10-2018 Y11_14111 2492049fed94bc979d0b08c7429302bf 987 Gene3D G3DSA:1.10.3210.10 825 955 1.4E-24 T 13-10-2018 Y11_14111 2492049fed94bc979d0b08c7429302bf 987 SUPERFAMILY SSF55781 441 591 3.99E-7 T 13-10-2018 Y11_14111 2492049fed94bc979d0b08c7429302bf 987 SMART SM00471 607 917 2.0E-4 T 13-10-2018 IPR003607 HD/PDEase domain Y11_14111 2492049fed94bc979d0b08c7429302bf 987 Gene3D G3DSA:3.30.450.20 177 230 3.0E-11 T 13-10-2018 Y11_20471 cfd79fe232926efcd7e37227a75e7cea 135 SUPERFAMILY SSF54637 2 130 8.89E-38 T 13-10-2018 IPR029069 HotDog domain superfamily Y11_20471 cfd79fe232926efcd7e37227a75e7cea 135 PIRSF PIRSF003230 1 134 1.1E-22 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Y11_20471 cfd79fe232926efcd7e37227a75e7cea 135 Pfam PF13279 Thioesterase-like superfamily 12 126 3.0E-16 T 13-10-2018 Y11_20471 cfd79fe232926efcd7e37227a75e7cea 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 6 118 2.8E-29 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Y11_20471 cfd79fe232926efcd7e37227a75e7cea 135 Gene3D G3DSA:3.10.129.10 1 133 1.8E-35 T 13-10-2018 Y11_25341 de521076e082217bf38fcbefa44f691d 168 Gene3D G3DSA:1.10.530.40 27 168 5.3E-47 T 13-10-2018 Y11_25341 de521076e082217bf38fcbefa44f691d 168 Pfam PF00959 Phage lysozyme 53 158 9.5E-19 T 13-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 Y11_25341 de521076e082217bf38fcbefa44f691d 168 SUPERFAMILY SSF53955 10 168 6.14E-54 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Y11_13311 de521076e082217bf38fcbefa44f691d 168 Gene3D G3DSA:1.10.530.40 27 168 5.3E-47 T 13-10-2018 Y11_13311 de521076e082217bf38fcbefa44f691d 168 Pfam PF00959 Phage lysozyme 53 158 9.5E-19 T 13-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 Y11_13311 de521076e082217bf38fcbefa44f691d 168 SUPERFAMILY SSF53955 10 168 6.14E-54 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Y11_01381 8504ea7c685057a5184d31f97a80f782 168 Pfam PF03918 Cytochrome C biogenesis protein 16 150 2.4E-55 T 13-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family Y11_01381 8504ea7c685057a5184d31f97a80f782 168 Gene3D G3DSA:1.10.8.640 23 108 1.3E-36 T 13-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily Y11_01351 5db5b960bfb98b8b36e4d46c69a3a850 164 Pfam PF03100 CcmE 4 137 3.1E-45 T 13-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 Y11_01351 5db5b960bfb98b8b36e4d46c69a3a850 164 Gene3D G3DSA:2.40.50.140 30 143 4.8E-43 T 13-10-2018 Y11_01351 5db5b960bfb98b8b36e4d46c69a3a850 164 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 32.371 T 13-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 Y11_01351 5db5b960bfb98b8b36e4d46c69a3a850 164 SUPERFAMILY SSF82093 30 143 5.1E-41 T 13-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 Y11_04781 438db2160f2662781d979a2acb98cfb3 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 109 1.3E-51 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Y11_04781 438db2160f2662781d979a2acb98cfb3 109 Pfam PF04358 DsrC like protein 3 109 1.2E-47 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Y11_04781 438db2160f2662781d979a2acb98cfb3 109 SUPERFAMILY SSF69721 2 109 3.01E-43 T 13-10-2018 IPR025526 DsrC-like domain superfamily Y11_04781 438db2160f2662781d979a2acb98cfb3 109 Gene3D G3DSA:1.10.10.370 39 109 1.6E-32 T 13-10-2018 Y11_04781 438db2160f2662781d979a2acb98cfb3 109 PIRSF PIRSF006223 2 109 4.0E-48 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Y11_04781 438db2160f2662781d979a2acb98cfb3 109 Gene3D G3DSA:3.30.1420.10 1 37 2.5E-13 T 13-10-2018 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 Pfam PF13180 PDZ domain 293 382 1.2E-14 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 Gene3D G3DSA:2.30.42.10 289 388 2.5E-27 T 13-10-2018 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 Gene3D G3DSA:2.40.10.120 38 285 1.5E-83 T 13-10-2018 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 476 1.3E-164 T 13-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 SMART SM00228 398 470 1.5E-11 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 SMART SM00228 291 373 8.3E-13 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 SUPERFAMILY SSF50156 273 382 1.16E-21 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 SUPERFAMILY SSF50494 1 300 3.02E-64 T 13-10-2018 IPR009003 Peptidase S1, PA clan Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 Pfam PF13365 Trypsin-like peptidase domain 116 252 3.2E-32 T 13-10-2018 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 397 467 3.1E-12 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 Gene3D G3DSA:2.30.42.10 389 478 6.3E-30 T 13-10-2018 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 4.1E-60 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 PRINTS PR00834 HtrA/DegQ protease family signature 147 167 4.1E-60 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 4.1E-60 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 PRINTS PR00834 HtrA/DegQ protease family signature 188 212 4.1E-60 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 PRINTS PR00834 HtrA/DegQ protease family signature 126 138 4.1E-60 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 PRINTS PR00834 HtrA/DegQ protease family signature 245 262 4.1E-60 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Y11_39751 0bbb0bb7c05e0e729a65cdaf124e57b5 478 SUPERFAMILY SSF50156 408 474 1.26E-15 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Y11_11871 921ea043a477f9034bb5ad1cc7a1c1ed 598 Gene3D G3DSA:3.30.1360.30 271 420 1.1E-198 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Y11_11871 921ea043a477f9034bb5ad1cc7a1c1ed 598 SUPERFAMILY SSF50249 1 105 1.33E-34 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_11871 921ea043a477f9034bb5ad1cc7a1c1ed 598 SUPERFAMILY SSF55681 108 583 3.13E-105 T 13-10-2018 Y11_11871 921ea043a477f9034bb5ad1cc7a1c1ed 598 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.685 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Y11_11871 921ea043a477f9034bb5ad1cc7a1c1ed 598 SUPERFAMILY SSF55261 288 419 6.05E-45 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Y11_11871 921ea043a477f9034bb5ad1cc7a1c1ed 598 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 1.3E-17 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Y11_11871 921ea043a477f9034bb5ad1cc7a1c1ed 598 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 2.2E-275 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Y11_11871 921ea043a477f9034bb5ad1cc7a1c1ed 598 Gene3D G3DSA:3.30.930.10 118 578 1.1E-198 T 13-10-2018 Y11_11871 921ea043a477f9034bb5ad1cc7a1c1ed 598 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 3.0E-109 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_11871 921ea043a477f9034bb5ad1cc7a1c1ed 598 Pfam PF02938 GAD domain 307 406 4.2E-30 T 13-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Y11_11871 921ea043a477f9034bb5ad1cc7a1c1ed 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 3.2E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_11871 921ea043a477f9034bb5ad1cc7a1c1ed 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 3.2E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_11871 921ea043a477f9034bb5ad1cc7a1c1ed 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 3.2E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_11871 921ea043a477f9034bb5ad1cc7a1c1ed 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 3.2E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_11871 921ea043a477f9034bb5ad1cc7a1c1ed 598 Gene3D G3DSA:2.40.50.140 1 106 8.0E-36 T 13-10-2018 Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 SUPERFAMILY SSF82693 424 609 4.71E-25 T 13-10-2018 Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 Pfam PF00873 AcrB/AcrD/AcrF family 311 729 1.5E-112 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.9E-14 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.9E-14 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 Gene3D G3DSA:1.20.1640.10 313 729 1.8E-107 T 13-10-2018 Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 Gene3D G3DSA:3.30.2090.10 473 561 1.8E-107 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 Gene3D G3DSA:3.30.2090.10 179 275 8.1E-88 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 Gene3D G3DSA:3.30.70.1430 38 132 8.1E-88 T 13-10-2018 Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 SUPERFAMILY SSF82693 321 423 6.28E-28 T 13-10-2018 Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 SUPERFAMILY SSF82693 38 131 2.12E-26 T 13-10-2018 Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 Gene3D G3DSA:3.30.70.1320 133 312 8.1E-88 T 13-10-2018 Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 SUPERFAMILY SSF82866 583 729 9.94E-33 T 13-10-2018 Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 SUPERFAMILY SSF82714 474 560 5.62E-16 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 Gene3D G3DSA:3.30.70.1440 421 618 1.8E-107 T 13-10-2018 Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 Gene3D G3DSA:3.30.70.1430 323 420 1.8E-107 T 13-10-2018 Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 SUPERFAMILY SSF82714 183 272 6.02E-20 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 SUPERFAMILY SSF82693 136 317 9.29E-18 T 13-10-2018 Y11_23881 46bf03d444d4ccb1db07a8a2dc0673fb 729 Gene3D G3DSA:1.20.1640.10 8 37 8.1E-88 T 13-10-2018 Y11_31921 531b48ea8474dc4ddf216eb9138dc3eb 278 Gene3D G3DSA:1.20.1540.10 92 271 4.2E-59 T 13-10-2018 IPR035952 Rhomboid-like superfamily Y11_31921 531b48ea8474dc4ddf216eb9138dc3eb 278 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 84 7.8E-28 T 13-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 Y11_31921 531b48ea8474dc4ddf216eb9138dc3eb 278 Gene3D G3DSA:3.30.70.2350 1 68 1.2E-21 T 13-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily Y11_31921 531b48ea8474dc4ddf216eb9138dc3eb 278 Pfam PF01694 Rhomboid family 132 271 1.2E-28 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Y11_31921 531b48ea8474dc4ddf216eb9138dc3eb 278 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 275 48.747 T 13-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 Y11_31921 531b48ea8474dc4ddf216eb9138dc3eb 278 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 271 1.1E-121 T 13-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 Y11_31921 531b48ea8474dc4ddf216eb9138dc3eb 278 SUPERFAMILY SSF144091 94 271 1.14E-43 T 13-10-2018 Y11_37761 ba40bac5102b678baf138abbdd4656c7 566 Pfam PF02543 Carbamoyltransferase N-terminus 7 72 1.9E-11 T 13-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 Y11_37761 ba40bac5102b678baf138abbdd4656c7 566 Pfam PF02543 Carbamoyltransferase N-terminus 93 337 2.0E-23 T 13-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 Y11_37761 ba40bac5102b678baf138abbdd4656c7 566 SUPERFAMILY SSF53067 22 345 4.66E-7 T 13-10-2018 Y11_37761 ba40bac5102b678baf138abbdd4656c7 566 Gene3D G3DSA:3.30.420.350 98 332 1.1E-56 T 13-10-2018 Y11_37761 ba40bac5102b678baf138abbdd4656c7 566 Gene3D G3DSA:3.90.870.20 355 560 5.9E-81 T 13-10-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily Y11_37761 ba40bac5102b678baf138abbdd4656c7 566 Pfam PF16861 Carbamoyltransferase C-terminus 392 561 4.4E-70 T 13-10-2018 IPR031730 Carbamoyltransferase, C-terminal Y11_37761 ba40bac5102b678baf138abbdd4656c7 566 Gene3D G3DSA:3.30.420.40 14 339 1.1E-56 T 13-10-2018 Y11_42201 5eaeeaf6a1fc055414ff46bdb3ac1645 200 Gene3D G3DSA:3.40.50.1820 62 190 7.8E-8 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_42201 5eaeeaf6a1fc055414ff46bdb3ac1645 200 Pfam PF11187 Protein of unknown function (DUF2974) 76 153 1.3E-4 T 13-10-2018 IPR024499 Protein of unknown function DUF2974 Y11_42201 5eaeeaf6a1fc055414ff46bdb3ac1645 200 SUPERFAMILY SSF53474 30 175 9.85E-17 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_40771 b2b2e8942f703ed23728fd0c1813c720 633 SUPERFAMILY SSF52540 298 629 9.74E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_40771 b2b2e8942f703ed23728fd0c1813c720 633 Gene3D G3DSA:1.10.10.1020 1 114 5.3E-35 T 13-10-2018 Y11_40771 b2b2e8942f703ed23728fd0c1813c720 633 Pfam PF13538 UvrD-like helicase C-terminal domain 558 604 1.6E-15 T 13-10-2018 IPR027785 UvrD-like helicase C-terminal domain Y11_40771 b2b2e8942f703ed23728fd0c1813c720 633 Gene3D G3DSA:3.40.50.300 115 377 6.2E-76 T 13-10-2018 Y11_40771 b2b2e8942f703ed23728fd0c1813c720 633 Gene3D G3DSA:3.40.50.300 504 618 1.5E-27 T 13-10-2018 Y11_40771 b2b2e8942f703ed23728fd0c1813c720 633 Gene3D G3DSA:3.40.50.300 387 501 3.8E-27 T 13-10-2018 Y11_40771 b2b2e8942f703ed23728fd0c1813c720 633 Pfam PF13604 AAA domain 173 333 5.0E-32 T 13-10-2018 Y11_40771 b2b2e8942f703ed23728fd0c1813c720 633 SUPERFAMILY SSF52540 7 382 4.22E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_40771 b2b2e8942f703ed23728fd0c1813c720 633 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 14 627 52.045 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 Y11_40771 b2b2e8942f703ed23728fd0c1813c720 633 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 5 629 7.5E-188 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 Y11_14831 741d9249ef5491e2ee5b7192baf8adfe 336 SUPERFAMILY SSF50129 11 149 8.98E-38 T 13-10-2018 IPR011032 GroES-like superfamily Y11_14831 741d9249ef5491e2ee5b7192baf8adfe 336 Gene3D G3DSA:3.90.180.10 24 334 7.8E-105 T 13-10-2018 Y11_14831 741d9249ef5491e2ee5b7192baf8adfe 336 Pfam PF00107 Zinc-binding dehydrogenase 161 285 1.1E-26 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Y11_14831 741d9249ef5491e2ee5b7192baf8adfe 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 114 1.8E-10 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Y11_14831 741d9249ef5491e2ee5b7192baf8adfe 336 SMART SM00829 20 334 1.3E-57 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Y11_14831 741d9249ef5491e2ee5b7192baf8adfe 336 Gene3D G3DSA:3.40.50.720 130 273 7.8E-105 T 13-10-2018 Y11_14831 741d9249ef5491e2ee5b7192baf8adfe 336 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 11 335 8.3E-149 T 13-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 Y11_14831 741d9249ef5491e2ee5b7192baf8adfe 336 SUPERFAMILY SSF51735 122 298 1.75E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_16271 483be6cd2740365023ece887fdd223fc 338 SUPERFAMILY SSF89028 1 176 2.94E-51 T 13-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Y11_16271 483be6cd2740365023ece887fdd223fc 338 Gene3D G3DSA:1.20.1200.10 12 191 2.6E-50 T 13-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Y11_16271 483be6cd2740365023ece887fdd223fc 338 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 177 1.0E-46 T 13-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Y11_16271 483be6cd2740365023ece887fdd223fc 338 PIRSF PIRSF036411 1 335 4.2E-103 T 13-10-2018 IPR009221 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, bifunctional PduO Y11_16271 483be6cd2740365023ece887fdd223fc 338 Pfam PF03928 Haem-degrading 207 330 1.1E-25 T 13-10-2018 IPR005624 Haem-degrading Y11_16271 483be6cd2740365023ece887fdd223fc 338 Gene3D G3DSA:3.30.450.150 194 337 1.9E-45 T 13-10-2018 IPR038084 GlcG-like domain superfamily Y11_16271 483be6cd2740365023ece887fdd223fc 338 SUPERFAMILY SSF143744 203 334 3.79E-36 T 13-10-2018 IPR038084 GlcG-like domain superfamily Y11_16271 483be6cd2740365023ece887fdd223fc 338 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 157 4.0E-45 T 13-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Y11_16271 483be6cd2740365023ece887fdd223fc 338 Pfam PF01923 Cobalamin adenosyltransferase 3 166 8.2E-52 T 13-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Y11_04031 889cec898a5415bf21c2fd885674ed96 430 Gene3D G3DSA:1.10.287.40 1 104 1.1E-18 T 13-10-2018 Y11_04031 889cec898a5415bf21c2fd885674ed96 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 406 3.9E-35 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_04031 889cec898a5415bf21c2fd885674ed96 430 PIRSF PIRSF001529 1 430 1.0E-182 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Y11_04031 889cec898a5415bf21c2fd885674ed96 430 Gene3D G3DSA:3.30.930.10 105 430 1.9E-115 T 13-10-2018 Y11_04031 889cec898a5415bf21c2fd885674ed96 430 SUPERFAMILY SSF55681 116 425 1.49E-99 T 13-10-2018 Y11_04031 889cec898a5415bf21c2fd885674ed96 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 1.2E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Y11_04031 889cec898a5415bf21c2fd885674ed96 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 1.2E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Y11_04031 889cec898a5415bf21c2fd885674ed96 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 1.2E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Y11_04031 889cec898a5415bf21c2fd885674ed96 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 1.2E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Y11_04031 889cec898a5415bf21c2fd885674ed96 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 1.2E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Y11_04031 889cec898a5415bf21c2fd885674ed96 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 3.5E-181 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Y11_04031 889cec898a5415bf21c2fd885674ed96 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.2E-29 T 13-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Y11_04031 889cec898a5415bf21c2fd885674ed96 430 SUPERFAMILY SSF46589 1 112 2.62E-30 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Y11_04031 889cec898a5415bf21c2fd885674ed96 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 41.668 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Y11_30141 110d6b49525178e0f3c545adc0af5f35 220 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 218 1.2E-63 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Y11_30141 110d6b49525178e0f3c545adc0af5f35 220 SUPERFAMILY SSF53686 6 219 1.44E-70 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y11_30141 110d6b49525178e0f3c545adc0af5f35 220 Gene3D G3DSA:3.40.50.1100 51 147 4.7E-83 T 13-10-2018 Y11_30141 110d6b49525178e0f3c545adc0af5f35 220 Gene3D G3DSA:3.40.50.1100 8 219 4.7E-83 T 13-10-2018 Y11_30141 110d6b49525178e0f3c545adc0af5f35 220 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 43 56 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Y11_30811 c5f4b3e44d82da6bc9956df34bb10190 466 Gene3D G3DSA:3.20.20.80 4 462 2.1E-131 T 13-10-2018 Y11_30811 c5f4b3e44d82da6bc9956df34bb10190 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 2.1E-9 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_30811 c5f4b3e44d82da6bc9956df34bb10190 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 386 397 2.1E-9 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_30811 c5f4b3e44d82da6bc9956df34bb10190 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 431 443 2.1E-9 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_30811 c5f4b3e44d82da6bc9956df34bb10190 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 407 424 2.1E-9 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_30811 c5f4b3e44d82da6bc9956df34bb10190 466 Pfam PF00232 Glycosyl hydrolase family 1 4 461 3.0E-104 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Y11_30811 c5f4b3e44d82da6bc9956df34bb10190 466 SUPERFAMILY SSF51445 2 458 8.23E-131 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_17931 6c75c5a09e66474fc594ee41dacefce4 570 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 4.3E-147 T 13-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 Y11_17931 6c75c5a09e66474fc594ee41dacefce4 570 Gene3D G3DSA:3.30.465.10 106 268 1.7E-76 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Y11_17931 6c75c5a09e66474fc594ee41dacefce4 570 Gene3D G3DSA:3.30.43.10 1 103 6.3E-12 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Y11_17931 6c75c5a09e66474fc594ee41dacefce4 570 Gene3D G3DSA:3.30.1370.20 435 519 5.0E-41 T 13-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 Y11_17931 6c75c5a09e66474fc594ee41dacefce4 570 Pfam PF01565 FAD binding domain 47 166 7.0E-7 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Y11_17931 6c75c5a09e66474fc594ee41dacefce4 570 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 10 568 58.891 T 13-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 Y11_17931 6c75c5a09e66474fc594ee41dacefce4 570 PIRSF PIRSF000101 4 569 1.7E-291 T 13-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 Y11_17931 6c75c5a09e66474fc594ee41dacefce4 570 SUPERFAMILY SSF55103 275 567 5.23E-116 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Y11_17931 6c75c5a09e66474fc594ee41dacefce4 570 Gene3D G3DSA:3.30.70.610 352 434 2.6E-19 T 13-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 Y11_17931 6c75c5a09e66474fc594ee41dacefce4 570 Gene3D G3DSA:3.30.70.610 269 350 7.9E-19 T 13-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 Y11_17931 6c75c5a09e66474fc594ee41dacefce4 570 SUPERFAMILY SSF56176 10 271 1.53E-70 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Y11_35571 c2a585f57bc29b49bb266d4ac5a34861 321 Gene3D G3DSA:2.60.120.1440 101 238 1.1E-23 T 13-10-2018 Y11_35571 c2a585f57bc29b49bb266d4ac5a34861 321 Pfam PF16220 Domain of unknown function (DUF4880) 13 54 2.7E-10 T 13-10-2018 IPR032623 FecR, N-terminal Y11_35571 c2a585f57bc29b49bb266d4ac5a34861 321 Pfam PF04773 FecR protein 115 200 1.5E-19 T 13-10-2018 IPR006860 FecR protein Y11_35571 c2a585f57bc29b49bb266d4ac5a34861 321 PIRSF PIRSF018266 2 317 5.6E-75 T 13-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Y11_09151 2e6d92b8cbfefbf83101a6d6833b7674 262 Pfam PF05013 N-formylglutamate amidohydrolase 27 234 2.5E-41 T 13-10-2018 IPR007709 N-formylglutamate amidohydrolase Y11_09151 2e6d92b8cbfefbf83101a6d6833b7674 262 SUPERFAMILY SSF53187 14 256 3.98E-70 T 13-10-2018 Y11_09151 2e6d92b8cbfefbf83101a6d6833b7674 262 Gene3D G3DSA:3.40.630.40 17 259 5.3E-78 T 13-10-2018 Y11_09151 2e6d92b8cbfefbf83101a6d6833b7674 262 PIRSF PIRSF029730 5 262 4.6E-86 T 13-10-2018 IPR011227 Uncharacterised conserved protein UCP029730 Y11_20431 0238daa5d87fbef1849c64545e2f6ba0 346 Gene3D G3DSA:3.40.50.1100 49 155 8.9E-68 T 13-10-2018 Y11_20431 0238daa5d87fbef1849c64545e2f6ba0 346 Gene3D G3DSA:3.40.50.1100 22 322 8.9E-68 T 13-10-2018 Y11_20431 0238daa5d87fbef1849c64545e2f6ba0 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 312 3.1E-44 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Y11_20431 0238daa5d87fbef1849c64545e2f6ba0 346 SUPERFAMILY SSF53686 21 332 1.14E-69 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y11_09651 21515c1ad03a543e1ca35ec7d35ab9b1 105 ProDom PD071248 DNA-BINDING SINGLE STRANDED DNA PHAGE PROTIEN GPV HELIX-DESTABILIZING SINGLE-STRANDED REPLICATION 5 104 2.0E-51 T 13-10-2018 IPR035411 Putative DNA-Binding protein G5P Y11_09651 21515c1ad03a543e1ca35ec7d35ab9b1 105 Pfam PF17426 Putative Gamma DNA binding protein G5P 3 104 3.9E-40 T 13-10-2018 IPR035411 Putative DNA-Binding protein G5P Y11_27431 88f7e7a81248093c7b12cb0fff50ad13 308 Gene3D G3DSA:1.10.10.10 1 91 6.1E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_27431 88f7e7a81248093c7b12cb0fff50ad13 308 SUPERFAMILY SSF53850 90 292 1.93E-40 T 13-10-2018 Y11_27431 88f7e7a81248093c7b12cb0fff50ad13 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.8E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_27431 88f7e7a81248093c7b12cb0fff50ad13 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.8E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_27431 88f7e7a81248093c7b12cb0fff50ad13 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.8E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_27431 88f7e7a81248093c7b12cb0fff50ad13 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.1E-22 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_27431 88f7e7a81248093c7b12cb0fff50ad13 308 Gene3D G3DSA:3.40.190.290 92 291 6.3E-48 T 13-10-2018 Y11_27431 88f7e7a81248093c7b12cb0fff50ad13 308 SUPERFAMILY SSF46785 1 86 2.82E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_27431 88f7e7a81248093c7b12cb0fff50ad13 308 Pfam PF03466 LysR substrate binding domain 89 289 2.0E-41 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 SUPERFAMILY SSF52009 374 475 9.03E-20 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 Pfam PF00391 PEP-utilising enzyme, mobile domain 401 472 2.5E-12 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 125 7.6E-37 T 13-10-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 166 173 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 Gene3D G3DSA:3.30.1340.10 155 241 6.8E-21 T 13-10-2018 IPR035895 HPr-like superfamily Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 SUPERFAMILY SSF47831 276 391 2.09E-28 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 Pfam PF05524 PEP-utilising enzyme, N-terminal 252 374 8.1E-21 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 Gene3D G3DSA:1.10.274.10 269 394 4.6E-52 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 Pfam PF00381 PTS HPr component phosphorylation site 158 234 1.5E-17 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 Gene3D G3DSA:3.50.30.10 252 474 4.6E-52 T 13-10-2018 Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 SUPERFAMILY SSF53062 1 128 2.88E-32 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 157 233 2.1E-15 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 Pfam PF03610 PTS system fructose IIA component 4 119 4.0E-25 T 13-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 SUPERFAMILY SSF55594 157 240 2.62E-20 T 13-10-2018 IPR035895 HPr-like superfamily Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 Gene3D G3DSA:3.40.50.510 1 132 8.8E-43 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 PRINTS PR00107 Phosphocarrier protein signature 166 182 1.4E-8 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 PRINTS PR00107 Phosphocarrier protein signature 191 206 1.4E-8 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Y11_37741 d13ae1434e31f77ee65556d3fd824e86 477 PRINTS PR00107 Phosphocarrier protein signature 206 223 1.4E-8 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Y11_28231 c6d47636379951088b0f198f4802698f 310 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 23 306 1.0E-127 T 13-10-2018 Y11_28231 c6d47636379951088b0f198f4802698f 310 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 14 307 21.106 T 13-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Y11_28231 c6d47636379951088b0f198f4802698f 310 Pfam PF01040 UbiA prenyltransferase family 34 279 3.0E-35 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Y11_28231 c6d47636379951088b0f198f4802698f 310 PIRSF PIRSF005355 7 310 2.5E-86 T 13-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 1.5E-25 T 13-10-2018 IPR003711 CarD-like/TRCF domain Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 SUPERFAMILY SSF52540 779 987 5.75E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 SUPERFAMILY SSF143517 992 1144 2.22E-43 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 SMART SM01058 476 573 2.2E-52 T 13-10-2018 IPR003711 CarD-like/TRCF domain Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 Gene3D G3DSA:3.90.1150.50 1001 1148 1.4E-46 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 SMART SM00982 1005 1105 1.6E-47 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 Pfam PF00271 Helicase conserved C-terminal domain 803 906 6.9E-18 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 Pfam PF03461 TRCF domain 1007 1097 3.4E-27 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 SUPERFAMILY SSF52540 351 463 4.51E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 Gene3D G3DSA:3.40.50.300 539 778 5.5E-236 T 13-10-2018 Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 Gene3D G3DSA:2.30.30.840 480 538 5.5E-236 T 13-10-2018 Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 SMART SM00487 597 787 6.0E-33 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 32 1140 27.882 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 Gene3D G3DSA:3.40.50.11140 354 450 3.5E-35 T 13-10-2018 Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 Gene3D G3DSA:3.30.2060.10 128 213 3.2E-129 T 13-10-2018 Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 SMART SM00490 823 907 4.0E-19 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 SUPERFAMILY SSF52540 7 341 6.16E-105 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 Gene3D G3DSA:3.40.50.300 475 987 5.5E-236 T 13-10-2018 Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 5.9E-19 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 SUPERFAMILY SSF141259 468 545 3.27E-24 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 SUPERFAMILY SSF52540 520 780 1.49E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_05521 fb50f0c1cb7d0648bcde312150b55ac2 1148 Gene3D G3DSA:3.40.50.11180 24 334 3.2E-129 T 13-10-2018 Y11_25781 86c603f866c727b57236ab570f14c4f7 333 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 1.9E-24 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Y11_25781 86c603f866c727b57236ab570f14c4f7 333 Gene3D G3DSA:3.30.360.10 134 325 5.8E-50 T 13-10-2018 Y11_25781 86c603f866c727b57236ab570f14c4f7 333 SUPERFAMILY SSF51735 2 152 9.72E-42 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_25781 86c603f866c727b57236ab570f14c4f7 333 Gene3D G3DSA:3.40.50.720 1 133 4.1E-35 T 13-10-2018 Y11_25781 86c603f866c727b57236ab570f14c4f7 333 SUPERFAMILY SSF55347 127 291 1.08E-21 T 13-10-2018 Y11_34221 5ce9ecf921f181dc66d7f50e6d2439bd 90 Pfam PF06611 Protein of unknown function (DUF1145) 1 58 2.9E-27 T 13-10-2018 IPR009525 Protein of unknown function DUF1145 Y11_29321 3680a49ec0b5d008ac956552f19afe44 195 Gene3D G3DSA:1.10.150.240 16 81 2.7E-62 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Y11_29321 3680a49ec0b5d008ac956552f19afe44 195 SUPERFAMILY SSF56784 3 189 1.68E-40 T 13-10-2018 IPR036412 HAD-like superfamily Y11_29321 3680a49ec0b5d008ac956552f19afe44 195 Gene3D G3DSA:3.40.50.1000 4 182 2.7E-62 T 13-10-2018 IPR023214 HAD superfamily Y11_29321 3680a49ec0b5d008ac956552f19afe44 195 Pfam PF13419 Haloacid dehalogenase-like hydrolase 52 182 2.5E-8 T 13-10-2018 Y11_29321 3680a49ec0b5d008ac956552f19afe44 195 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 55 184 1.2E-16 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_29321 3680a49ec0b5d008ac956552f19afe44 195 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 8.1E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_29321 3680a49ec0b5d008ac956552f19afe44 195 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 8.1E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_29321 3680a49ec0b5d008ac956552f19afe44 195 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 8.1E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_02081 4abe54a5f3afecb56efbd851391019d0 218 Gene3D G3DSA:3.40.50.1000 4 203 1.2E-53 T 13-10-2018 IPR023214 HAD superfamily Y11_02081 4abe54a5f3afecb56efbd851391019d0 218 SUPERFAMILY SSF56784 4 203 2.17E-42 T 13-10-2018 IPR036412 HAD-like superfamily Y11_02081 4abe54a5f3afecb56efbd851391019d0 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 6 181 1.5E-15 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_02081 4abe54a5f3afecb56efbd851391019d0 218 Gene3D G3DSA:1.10.150.240 18 80 1.2E-53 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Y11_02081 4abe54a5f3afecb56efbd851391019d0 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 2.1E-22 T 13-10-2018 Y11_42851 8315f2540f37db75bc6a03ffa447db98 778 SUPERFAMILY SSF56601 210 644 1.23E-94 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_42851 8315f2540f37db75bc6a03ffa447db98 778 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 691 772 2.3E-16 T 13-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_42851 8315f2540f37db75bc6a03ffa447db98 778 Gene3D G3DSA:1.10.3810.10 57 252 2.0E-53 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_42851 8315f2540f37db75bc6a03ffa447db98 778 SUPERFAMILY SSF53955 41 261 4.78E-63 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Y11_42851 8315f2540f37db75bc6a03ffa447db98 778 Pfam PF00912 Transglycosylase 63 228 7.3E-49 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_42851 8315f2540f37db75bc6a03ffa447db98 778 Gene3D G3DSA:3.40.710.10 254 610 3.6E-66 T 13-10-2018 Y11_42851 8315f2540f37db75bc6a03ffa447db98 778 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 40 776 5.9E-247 T 13-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_42851 8315f2540f37db75bc6a03ffa447db98 778 Pfam PF00905 Penicillin binding protein transpeptidase domain 306 424 1.9E-9 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Y11_21701 c41cde6a3d617fedf256b09fdc795a74 279 Gene3D G3DSA:1.10.10.10 1 76 1.2E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_21701 c41cde6a3d617fedf256b09fdc795a74 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 71 9.5E-13 T 13-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Y11_21701 c41cde6a3d617fedf256b09fdc795a74 279 Pfam PF01380 SIS domain 124 247 3.0E-12 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_21701 c41cde6a3d617fedf256b09fdc795a74 279 Gene3D G3DSA:3.40.50.10490 90 274 5.9E-28 T 13-10-2018 Y11_21701 c41cde6a3d617fedf256b09fdc795a74 279 SUPERFAMILY SSF53697 94 254 5.78E-13 T 13-10-2018 Y11_21701 c41cde6a3d617fedf256b09fdc795a74 279 SUPERFAMILY SSF46689 2 79 2.69E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_12541 06b527ee3bf84784b01cfebd27fd64ae 284 SUPERFAMILY SSF53335 3 272 1.13E-57 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_12541 06b527ee3bf84784b01cfebd27fd64ae 284 Gene3D G3DSA:1.10.8.10 1 84 8.9E-25 T 13-10-2018 Y11_12541 06b527ee3bf84784b01cfebd27fd64ae 284 Pfam PF13847 Methyltransferase domain 111 249 5.0E-22 T 13-10-2018 IPR025714 Methyltransferase domain Y11_12541 06b527ee3bf84784b01cfebd27fd64ae 284 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 274 44.033 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Y11_12541 06b527ee3bf84784b01cfebd27fd64ae 284 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 179 185 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Y11_12541 06b527ee3bf84784b01cfebd27fd64ae 284 Gene3D G3DSA:3.40.50.150 87 275 4.2E-61 T 13-10-2018 Y11_12541 06b527ee3bf84784b01cfebd27fd64ae 284 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 275 1.2E-88 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Y11_12541 06b527ee3bf84784b01cfebd27fd64ae 284 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 270 2.4E-90 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Y11_32311 91fcc0b5a41e888be2c54cd4a3ea5e55 116 Pfam PF10748 Protein of unknown function (DUF2531) 20 97 2.6E-6 T 13-10-2018 IPR019684 HofP protein Y11_23181 f8f958cd0e2c38fb9dd70acd57312ada 96 SUPERFAMILY SSF50022 1 90 2.1E-26 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Y11_23181 f8f958cd0e2c38fb9dd70acd57312ada 96 Pfam PF00355 Rieske [2Fe-2S] domain 3 88 2.3E-19 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Y11_23181 f8f958cd0e2c38fb9dd70acd57312ada 96 Gene3D G3DSA:2.102.10.10 1 95 2.0E-26 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Y11_21601 1d81fd654a824ed565f53362965279e5 229 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 1 222 41.571 T 13-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 Y11_21601 1d81fd654a824ed565f53362965279e5 229 SUPERFAMILY SSF56784 1 221 6.68E-57 T 13-10-2018 IPR036412 HAD-like superfamily Y11_21601 1d81fd654a824ed565f53362965279e5 229 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 221 1.5E-88 T 13-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 Y11_21601 1d81fd654a824ed565f53362965279e5 229 Gene3D G3DSA:3.40.50.1000 5 206 8.8E-74 T 13-10-2018 IPR023214 HAD superfamily Y11_21601 1d81fd654a824ed565f53362965279e5 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 2.3E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_21601 1d81fd654a824ed565f53362965279e5 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 191 204 2.3E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_21601 1d81fd654a824ed565f53362965279e5 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 2.3E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_21601 1d81fd654a824ed565f53362965279e5 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 114 127 2.3E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_21601 1d81fd654a824ed565f53362965279e5 229 Gene3D G3DSA:1.10.720.60 16 99 8.8E-74 T 13-10-2018 Y11_03011 3d80344e72605fc01e61eaa6d1508a93 407 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 17 397 5.1E-135 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Y11_03011 3d80344e72605fc01e61eaa6d1508a93 407 Pfam PF07690 Major Facilitator Superfamily 23 365 9.1E-47 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_03011 3d80344e72605fc01e61eaa6d1508a93 407 SUPERFAMILY SSF103473 9 404 3.27E-71 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_03011 3d80344e72605fc01e61eaa6d1508a93 407 Gene3D G3DSA:1.20.1720.10 18 397 6.6E-102 T 13-10-2018 Y11_14891 f9a06667a793471da7d5d1c8eae25c25 441 Gene3D G3DSA:3.40.50.1240 35 428 6.4E-171 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Y11_14891 f9a06667a793471da7d5d1c8eae25c25 441 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 36 50 - T 13-10-2018 IPR033379 Histidine acid phosphatase active site Y11_14891 f9a06667a793471da7d5d1c8eae25c25 441 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 35 381 3.3E-20 T 13-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 Y11_14891 f9a06667a793471da7d5d1c8eae25c25 441 SUPERFAMILY SSF53254 31 438 1.85E-71 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Y11_14891 f9a06667a793471da7d5d1c8eae25c25 441 Gene3D G3DSA:3.40.50.1240 162 287 6.4E-171 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Y11_17421 79bbac2b9b44aec835e99f6c1174b581 163 Pfam PF00583 Acetyltransferase (GNAT) family 32 133 5.3E-13 T 13-10-2018 IPR000182 GNAT domain Y11_17421 79bbac2b9b44aec835e99f6c1174b581 163 Gene3D G3DSA:3.40.630.30 3 162 2.3E-45 T 13-10-2018 Y11_17421 79bbac2b9b44aec835e99f6c1174b581 163 SUPERFAMILY SSF55729 1 160 2.06E-28 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_38021 25e59c5f40c2bcf4a7f4149ff02bee6d 417 SUPERFAMILY SSF52151 23 295 7.06E-45 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Y11_38021 25e59c5f40c2bcf4a7f4149ff02bee6d 417 Gene3D G3DSA:3.40.1090.10 111 256 2.3E-6 T 13-10-2018 Y11_38021 25e59c5f40c2bcf4a7f4149ff02bee6d 417 Gene3D G3DSA:3.40.1090.20 22 103 4.2E-5 T 13-10-2018 Y11_38021 25e59c5f40c2bcf4a7f4149ff02bee6d 417 Pfam PF01734 Patatin-like phospholipase 28 196 1.2E-20 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Y11_02761 c225dbb41dace23f4d210a83bca0dac6 376 SUPERFAMILY SSF56601 31 355 7.62E-68 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_02761 c225dbb41dace23f4d210a83bca0dac6 376 Gene3D G3DSA:3.40.710.10 24 374 5.7E-132 T 13-10-2018 Y11_02761 c225dbb41dace23f4d210a83bca0dac6 376 Pfam PF00144 Beta-lactamase 43 355 7.6E-62 T 13-10-2018 IPR001466 Beta-lactamase-related Y11_21241 3bf6479b9a0be511df6f7c0d7f0857f5 514 Pfam PF00367 phosphotransferase system, EIIB 443 473 1.9E-13 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Y11_21241 3bf6479b9a0be511df6f7c0d7f0857f5 514 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 404 499 1.4E-18 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 Y11_21241 3bf6479b9a0be511df6f7c0d7f0857f5 514 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 452 469 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Y11_21241 3bf6479b9a0be511df6f7c0d7f0857f5 514 Pfam PF02378 Phosphotransferase system, EIIC 10 341 4.6E-62 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Y11_21241 3bf6479b9a0be511df6f7c0d7f0857f5 514 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 3 513 4.2E-217 T 13-10-2018 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 Y11_21241 3bf6479b9a0be511df6f7c0d7f0857f5 514 SUPERFAMILY SSF55604 439 514 6.67E-20 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_21241 3bf6479b9a0be511df6f7c0d7f0857f5 514 Gene3D G3DSA:3.30.1360.60 435 514 2.2E-21 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_42291 f02b14c2f2a781458c3d77d1008438c5 118 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 1 110 3.2E-17 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Y11_42291 f02b14c2f2a781458c3d77d1008438c5 118 Pfam PF08281 Sigma-70, region 4 56 107 4.1E-19 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Y11_42291 f02b14c2f2a781458c3d77d1008438c5 118 Gene3D G3DSA:1.10.1740.10 1 47 1.3E-9 T 13-10-2018 Y11_42291 f02b14c2f2a781458c3d77d1008438c5 118 SUPERFAMILY SSF88659 49 110 1.63E-18 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Y11_42291 f02b14c2f2a781458c3d77d1008438c5 118 Gene3D G3DSA:1.10.10.10 48 118 2.4E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_40081 7fbaa61d0d00f1c51d94bbe8f56aa501 238 Pfam PF13098 Thioredoxin-like domain 105 227 3.3E-30 T 13-10-2018 IPR012336 Thioredoxin-like fold Y11_40081 7fbaa61d0d00f1c51d94bbe8f56aa501 238 Gene3D G3DSA:3.40.30.10 71 231 3.9E-51 T 13-10-2018 Y11_40081 7fbaa61d0d00f1c51d94bbe8f56aa501 238 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 76 1.4E-15 T 13-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal Y11_40081 7fbaa61d0d00f1c51d94bbe8f56aa501 238 Gene3D G3DSA:3.10.450.70 22 70 1.1E-24 T 13-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Y11_40081 7fbaa61d0d00f1c51d94bbe8f56aa501 238 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Y11_40081 7fbaa61d0d00f1c51d94bbe8f56aa501 238 SUPERFAMILY SSF54423 22 80 4.05E-18 T 13-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Y11_40081 7fbaa61d0d00f1c51d94bbe8f56aa501 238 SUPERFAMILY SSF52833 87 231 3.15E-41 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_04711 c4e16738e5397b644ad415b7dddd8b69 227 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 220 1.5E-45 T 13-10-2018 IPR018635 Uncharacterised protein family UPF0319 Y11_04711 c4e16738e5397b644ad415b7dddd8b69 227 Hamap MF_00789 UPF0319 protein YccT [yccT]. 4 223 25.507 T 13-10-2018 IPR018635 Uncharacterised protein family UPF0319 Y11_26441 462eee814d8490f8585a32794d8ae302 324 Gene3D G3DSA:1.20.58.1130 8 207 2.0E-85 T 13-10-2018 Y11_26441 462eee814d8490f8585a32794d8ae302 324 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 5.3E-89 T 13-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 Y11_26441 462eee814d8490f8585a32794d8ae302 324 Gene3D G3DSA:1.20.1420.30 35 309 2.0E-85 T 13-10-2018 Y11_26441 462eee814d8490f8585a32794d8ae302 324 Pfam PF01699 Sodium/calcium exchanger protein 5 144 4.8E-30 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Y11_26441 462eee814d8490f8585a32794d8ae302 324 Pfam PF01699 Sodium/calcium exchanger protein 175 317 3.1E-27 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Y11_33971 cbd414c74ed07ebf1e701d48db17886b 410 Gene3D G3DSA:3.40.50.12020 2 175 9.9E-58 T 13-10-2018 Y11_33971 cbd414c74ed07ebf1e701d48db17886b 410 Hamap MF_00677 UPF0261 protein . 2 407 52.513 T 13-10-2018 IPR008322 Uncharacterised protein family UPF0261 Y11_33971 cbd414c74ed07ebf1e701d48db17886b 410 PIRSF PIRSF033271 1 408 1.0E-195 T 13-10-2018 IPR008322 Uncharacterised protein family UPF0261 Y11_33971 cbd414c74ed07ebf1e701d48db17886b 410 Gene3D G3DSA:3.40.50.12030 188 407 8.4E-85 T 13-10-2018 Y11_33971 cbd414c74ed07ebf1e701d48db17886b 410 Pfam PF06792 Uncharacterised protein family (UPF0261) 4 404 1.3E-159 T 13-10-2018 IPR008322 Uncharacterised protein family UPF0261 Y11_00711 0aa35669f20151a5e46e958a3d4f7578 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 1.4E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_00711 0aa35669f20151a5e46e958a3d4f7578 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 407 1.4E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_00711 0aa35669f20151a5e46e958a3d4f7578 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 1.4E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_00711 0aa35669f20151a5e46e958a3d4f7578 455 SUPERFAMILY SSF158472 177 230 9.42E-9 T 13-10-2018 Y11_00711 0aa35669f20151a5e46e958a3d4f7578 455 SMART SM00387 342 452 1.4E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_00711 0aa35669f20151a5e46e958a3d4f7578 455 SUPERFAMILY SSF47384 216 296 4.32E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_00711 0aa35669f20151a5e46e958a3d4f7578 455 Gene3D G3DSA:3.30.565.10 300 451 2.4E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_00711 0aa35669f20151a5e46e958a3d4f7578 455 Gene3D G3DSA:1.10.287.130 180 297 4.1E-30 T 13-10-2018 Y11_00711 0aa35669f20151a5e46e958a3d4f7578 455 Pfam PF00672 HAMP domain 177 228 1.1E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_00711 0aa35669f20151a5e46e958a3d4f7578 455 SMART SM00388 232 295 1.5E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_00711 0aa35669f20151a5e46e958a3d4f7578 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 449 7.1E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_00711 0aa35669f20151a5e46e958a3d4f7578 455 SUPERFAMILY SSF55874 285 451 1.44E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_00711 0aa35669f20151a5e46e958a3d4f7578 455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 294 9.7E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_00711 0aa35669f20151a5e46e958a3d4f7578 455 SMART SM00304 176 231 7.8E-13 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_18241 e0be4ee740314f1acc3378a1f22e6527 125 SUPERFAMILY SSF53850 4 123 5.38E-36 T 13-10-2018 Y11_18241 e0be4ee740314f1acc3378a1f22e6527 125 Gene3D G3DSA:3.40.190.10 1 86 2.1E-34 T 13-10-2018 Y11_18241 e0be4ee740314f1acc3378a1f22e6527 125 Pfam PF13531 Bacterial extracellular solute-binding protein 5 122 9.2E-23 T 13-10-2018 Y11_18241 e0be4ee740314f1acc3378a1f22e6527 125 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 4 121 2.4E-41 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Y11_21991 6e2fb5bd8526e434c28b52488929b1b0 373 SUPERFAMILY SSF48179 241 366 1.13E-41 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_21991 6e2fb5bd8526e434c28b52488929b1b0 373 SUPERFAMILY SSF51735 91 238 1.77E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_21991 6e2fb5bd8526e434c28b52488929b1b0 373 SMART SM00830 9 89 5.9E-31 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Y11_21991 6e2fb5bd8526e434c28b52488929b1b0 373 SUPERFAMILY SSF48600 4 88 4.94E-24 T 13-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Y11_21991 6e2fb5bd8526e434c28b52488929b1b0 373 Pfam PF02153 Prephenate dehydrogenase 138 344 8.9E-33 T 13-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 Y11_21991 6e2fb5bd8526e434c28b52488929b1b0 373 Gene3D G3DSA:3.40.50.720 81 246 5.2E-43 T 13-10-2018 Y11_21991 6e2fb5bd8526e434c28b52488929b1b0 373 Pfam PF01817 Chorismate mutase type II 9 86 1.1E-20 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Y11_21991 6e2fb5bd8526e434c28b52488929b1b0 373 Gene3D G3DSA:1.20.59.10 1 80 2.0E-16 T 13-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Y11_21991 6e2fb5bd8526e434c28b52488929b1b0 373 PIRSF PIRSF001499 1 373 2.7E-184 T 13-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 Y11_21991 6e2fb5bd8526e434c28b52488929b1b0 373 Gene3D G3DSA:1.10.3660.10 248 373 2.7E-51 T 13-10-2018 Y11_21991 6e2fb5bd8526e434c28b52488929b1b0 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 8.0E-45 T 13-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 Y11_26641 6e70387f695a595c3412ae7374d5a0b6 553 Pfam PF11941 Domain of unknown function (DUF3459) 459 542 2.0E-6 T 13-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) Y11_26641 6e70387f695a595c3412ae7374d5a0b6 553 Pfam PF00128 Alpha amylase, catalytic domain 30 372 5.7E-124 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Y11_26641 6e70387f695a595c3412ae7374d5a0b6 553 SUPERFAMILY SSF51445 5 472 3.61E-153 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_26641 6e70387f695a595c3412ae7374d5a0b6 553 SMART SM00642 15 414 3.8E-154 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Y11_26641 6e70387f695a595c3412ae7374d5a0b6 553 SUPERFAMILY SSF51011 475 551 5.54E-17 T 13-10-2018 Y11_26641 6e70387f695a595c3412ae7374d5a0b6 553 Gene3D G3DSA:3.20.20.80 172 475 1.9E-108 T 13-10-2018 Y11_26641 6e70387f695a595c3412ae7374d5a0b6 553 Gene3D G3DSA:3.90.400.10 109 171 1.8E-27 T 13-10-2018 Y11_26641 6e70387f695a595c3412ae7374d5a0b6 553 Gene3D G3DSA:3.20.20.80 1 108 2.4E-49 T 13-10-2018 Y11_26641 6e70387f695a595c3412ae7374d5a0b6 553 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 550 5.2E-251 T 13-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 Y11_26641 6e70387f695a595c3412ae7374d5a0b6 553 Gene3D G3DSA:2.60.40.1180 476 551 1.8E-15 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta Y11_18091 5b4829c19f2c8c3ed9b75edb0f180e0d 326 SMART SM00729 13 217 2.3E-4 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Y11_18091 5b4829c19f2c8c3ed9b75edb0f180e0d 326 Pfam PF04055 Radical SAM superfamily 18 178 7.1E-29 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_18091 5b4829c19f2c8c3ed9b75edb0f180e0d 326 Gene3D G3DSA:3.20.20.70 1 326 3.0E-83 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_18091 5b4829c19f2c8c3ed9b75edb0f180e0d 326 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 13-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Y11_18091 5b4829c19f2c8c3ed9b75edb0f180e0d 326 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 326 5.2E-106 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Y11_18091 5b4829c19f2c8c3ed9b75edb0f180e0d 326 Pfam PF06463 Molybdenum Cofactor Synthesis C 183 309 3.6E-40 T 13-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Y11_18091 5b4829c19f2c8c3ed9b75edb0f180e0d 326 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 326 38.561 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Y11_18091 5b4829c19f2c8c3ed9b75edb0f180e0d 326 SUPERFAMILY SSF102114 4 275 7.59E-71 T 13-10-2018 Y11_18091 5b4829c19f2c8c3ed9b75edb0f180e0d 326 Pfam PF13353 4Fe-4S single cluster domain 22 122 3.5E-6 T 13-10-2018 Y11_04681 487f099cd8b47216ae5b17b0563858ac 171 PIRSF PIRSF028777 22 160 5.9E-55 T 13-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 Y11_04681 487f099cd8b47216ae5b17b0563858ac 171 Pfam PF03733 Inner membrane component domain 25 74 1.6E-9 T 13-10-2018 IPR005185 Inner membrane component domain Y11_04681 487f099cd8b47216ae5b17b0563858ac 171 Pfam PF03733 Inner membrane component domain 98 148 1.7E-18 T 13-10-2018 IPR005185 Inner membrane component domain Y11_08741 514f9de1028121899a9cbc460ceb8118 79 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 9 69 7.3E-27 T 13-10-2018 IPR014321 Phage shock protein, PspD Y11_08741 514f9de1028121899a9cbc460ceb8118 79 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 9 68 6.3E-25 T 13-10-2018 IPR014321 Phage shock protein, PspD Y11_06321 b993ba737aa8116435813207ec042c48 510 SUPERFAMILY SSF56176 426 507 1.25E-17 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Y11_06321 b993ba737aa8116435813207ec042c48 510 Gene3D G3DSA:3.30.465.10 430 505 1.8E-16 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Y11_06321 b993ba737aa8116435813207ec042c48 510 Pfam PF03471 Transporter associated domain 427 504 1.7E-17 T 13-10-2018 IPR005170 Transporter-associated domain Y11_06321 b993ba737aa8116435813207ec042c48 510 SMART SM01091 424 505 8.8E-22 T 13-10-2018 IPR005170 Transporter-associated domain Y11_06321 b993ba737aa8116435813207ec042c48 510 Pfam PF00571 CBS domain 363 412 3.9E-5 T 13-10-2018 IPR000644 CBS domain Y11_06321 b993ba737aa8116435813207ec042c48 510 SUPERFAMILY SSF54631 281 415 8.97E-24 T 13-10-2018 Y11_06321 b993ba737aa8116435813207ec042c48 510 Gene3D G3DSA:3.10.580.10 274 429 6.0E-44 T 13-10-2018 Y11_06321 b993ba737aa8116435813207ec042c48 510 Pfam PF03741 Integral membrane protein TerC family 10 199 2.3E-48 T 13-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 Y11_34091 ea42e6313c2545399df589d2551b5bd1 368 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 41 356 1.3E-71 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Y11_34091 ea42e6313c2545399df589d2551b5bd1 368 Gene3D G3DSA:3.20.20.190 34 362 1.1E-133 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Y11_34091 ea42e6313c2545399df589d2551b5bd1 368 SUPERFAMILY SSF51695 37 361 6.02E-91 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Y11_17871 05efca00ec0daf13a0a4c964cd07d3e8 309 Gene3D G3DSA:3.40.190.10 117 243 3.5E-56 T 13-10-2018 Y11_17871 05efca00ec0daf13a0a4c964cd07d3e8 309 Gene3D G3DSA:3.40.190.10 31 271 3.5E-56 T 13-10-2018 Y11_17871 05efca00ec0daf13a0a4c964cd07d3e8 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 44 292 1.7E-47 T 13-10-2018 Y11_17871 05efca00ec0daf13a0a4c964cd07d3e8 309 SUPERFAMILY SSF53850 44 299 3.72E-48 T 13-10-2018 Y11_17871 05efca00ec0daf13a0a4c964cd07d3e8 309 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 305 2.8E-100 T 13-10-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 Y11_17871 05efca00ec0daf13a0a4c964cd07d3e8 309 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 268 2.1E-84 T 13-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 Y11_23741 86b78e0d27afa455afcd0cd014016b1d 343 Gene3D G3DSA:3.40.50.150 96 343 3.9E-66 T 13-10-2018 Y11_23741 86b78e0d27afa455afcd0cd014016b1d 343 Pfam PF00891 O-methyltransferase 107 322 4.2E-37 T 13-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 Y11_23741 86b78e0d27afa455afcd0cd014016b1d 343 PIRSF PIRSF005739 1 343 5.0E-45 T 13-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 Y11_23741 86b78e0d27afa455afcd0cd014016b1d 343 Gene3D G3DSA:1.10.10.10 4 94 2.9E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_23741 86b78e0d27afa455afcd0cd014016b1d 343 SUPERFAMILY SSF53335 100 340 6.79E-44 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_23741 86b78e0d27afa455afcd0cd014016b1d 343 SUPERFAMILY SSF46785 9 98 3.79E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_41551 4172c751e9e1d7d0d02fcabc36b84028 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 253 272 7.8E-33 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_41551 4172c751e9e1d7d0d02fcabc36b84028 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 579 606 7.8E-33 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_41551 4172c751e9e1d7d0d02fcabc36b84028 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 384 395 7.8E-33 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_41551 4172c751e9e1d7d0d02fcabc36b84028 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 467 489 7.8E-33 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_41551 4172c751e9e1d7d0d02fcabc36b84028 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 495 518 7.8E-33 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_41551 4172c751e9e1d7d0d02fcabc36b84028 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 428 451 7.8E-33 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_41551 4172c751e9e1d7d0d02fcabc36b84028 716 SUPERFAMILY SSF48168 17 176 1.83E-61 T 13-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_41551 4172c751e9e1d7d0d02fcabc36b84028 716 Pfam PF08343 Ribonucleotide reductase N-terminal 18 99 1.0E-33 T 13-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Y11_41551 4172c751e9e1d7d0d02fcabc36b84028 716 Gene3D G3DSA:1.10.1650.20 296 347 9.9E-28 T 13-10-2018 Y11_41551 4172c751e9e1d7d0d02fcabc36b84028 716 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 568 590 - T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_41551 4172c751e9e1d7d0d02fcabc36b84028 716 SUPERFAMILY SSF51998 177 700 1.8E-187 T 13-10-2018 Y11_41551 4172c751e9e1d7d0d02fcabc36b84028 716 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 101 173 8.6E-11 T 13-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_41551 4172c751e9e1d7d0d02fcabc36b84028 716 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 17 716 0.0 T 13-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Y11_41551 4172c751e9e1d7d0d02fcabc36b84028 716 Pfam PF02867 Ribonucleotide reductase, barrel domain 178 695 9.8E-143 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_41551 4172c751e9e1d7d0d02fcabc36b84028 716 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 105 698 2.8E-160 T 13-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_06981 34ce95bdb41a4db21022e2cf5d1ff375 368 SUPERFAMILY SSF48452 104 215 3.08E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_06981 34ce95bdb41a4db21022e2cf5d1ff375 368 Gene3D G3DSA:1.25.40.10 18 249 7.2E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_06981 34ce95bdb41a4db21022e2cf5d1ff375 368 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 17 360 5.3E-122 T 13-10-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:1901515 Y11_40961 98d37babbb493d873d4a7330edee85c2 257 Gene3D G3DSA:3.30.2350.10 3 235 9.0E-63 T 13-10-2018 Y11_40961 98d37babbb493d873d4a7330edee85c2 257 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_40961 98d37babbb493d873d4a7330edee85c2 257 Pfam PF00849 RNA pseudouridylate synthase 10 170 1.7E-33 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_40961 98d37babbb493d873d4a7330edee85c2 257 SUPERFAMILY SSF55120 2 236 2.08E-62 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 Gene3D G3DSA:3.20.20.10 11 215 5.8E-110 T 13-10-2018 IPR029066 PLP-binding barrel Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 13-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 SUPERFAMILY SSF51419 10 233 8.41E-62 T 13-10-2018 IPR029066 PLP-binding barrel Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 PRINTS PR00992 Alanine racemase signature 248 263 9.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 PRINTS PR00992 Alanine racemase signature 155 166 9.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 PRINTS PR00992 Alanine racemase signature 121 133 9.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 PRINTS PR00992 Alanine racemase signature 27 43 9.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 PRINTS PR00992 Alanine racemase signature 190 217 9.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 PRINTS PR00992 Alanine racemase signature 338 351 9.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 PRINTS PR00992 Alanine racemase signature 265 280 9.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 PRINTS PR00992 Alanine racemase signature 61 79 9.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 PRINTS PR00992 Alanine racemase signature 286 303 9.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 TIGRFAM TIGR00492 alr: alanine racemase 5 352 2.6E-117 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 SUPERFAMILY SSF50621 227 352 6.28E-42 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 SMART SM01005 232 356 8.5E-58 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 Gene3D G3DSA:2.40.37.10 10 351 5.8E-110 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 Hamap MF_01201 Alanine racemase. 2 356 31.993 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 Pfam PF01168 Alanine racemase, N-terminal domain 10 217 1.6E-64 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_11411 33b9867b18f12984790f334cbc7ffdee 363 Pfam PF00842 Alanine racemase, C-terminal domain 232 352 9.2E-39 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_03541 a573ab9cf1521a734f56f61ba8b81966 455 SUPERFAMILY SSF143548 16 158 3.14E-44 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Y11_03541 a573ab9cf1521a734f56f61ba8b81966 455 Gene3D G3DSA:3.30.1330.90 10 159 7.7E-49 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Y11_03541 a573ab9cf1521a734f56f61ba8b81966 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 4.0E-219 T 13-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Y11_03541 a573ab9cf1521a734f56f61ba8b81966 455 Pfam PF03315 Serine dehydratase beta chain 3 155 1.8E-53 T 13-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Y11_03541 a573ab9cf1521a734f56f61ba8b81966 455 Pfam PF03313 Serine dehydratase alpha chain 184 448 6.2E-95 T 13-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Y11_06511 d2d44b260fa04562327f8c225b582269 128 Pfam PF04234 CopC domain 31 127 2.7E-23 T 13-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 Y11_06511 d2d44b260fa04562327f8c225b582269 128 Gene3D G3DSA:2.60.40.1220 30 128 3.8E-26 T 13-10-2018 Y11_06511 d2d44b260fa04562327f8c225b582269 128 SUPERFAMILY SSF81296 30 128 1.82E-26 T 13-10-2018 IPR014756 Immunoglobulin E-set Y11_05351 0a2f00c5bc6ab150560ec82f108e1a3a 269 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Y11_05351 0a2f00c5bc6ab150560ec82f108e1a3a 269 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Y11_05351 0a2f00c5bc6ab150560ec82f108e1a3a 269 Gene3D G3DSA:3.20.20.140 1 264 1.2E-98 T 13-10-2018 Y11_05351 0a2f00c5bc6ab150560ec82f108e1a3a 269 Pfam PF01026 TatD related DNase 4 255 1.0E-75 T 13-10-2018 IPR001130 TatD family GO:0016788 Y11_05351 0a2f00c5bc6ab150560ec82f108e1a3a 269 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Y11_05351 0a2f00c5bc6ab150560ec82f108e1a3a 269 SUPERFAMILY SSF51556 1 257 1.51E-85 T 13-10-2018 IPR032466 Metal-dependent hydrolase Y11_05351 0a2f00c5bc6ab150560ec82f108e1a3a 269 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 5.2E-92 T 13-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Y11_05351 0a2f00c5bc6ab150560ec82f108e1a3a 269 PIRSF PIRSF005902 1 259 2.4E-73 T 13-10-2018 IPR001130 TatD family GO:0016788 Y11_25011 1c5ea2ff0055ce53544c3815cd642e91 189 Gene3D G3DSA:2.30.30.40 6 71 2.9E-7 T 13-10-2018 Y11_25011 1c5ea2ff0055ce53544c3815cd642e91 189 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 10 187 3.1E-53 T 13-10-2018 IPR016476 SH3 domain protein Y11_25011 1c5ea2ff0055ce53544c3815cd642e91 189 PIRSF PIRSF006158 2 188 2.5E-68 T 13-10-2018 IPR016476 SH3 domain protein Y11_25011 1c5ea2ff0055ce53544c3815cd642e91 189 Pfam PF08239 Bacterial SH3 domain 17 68 1.7E-8 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type Y11_25011 1c5ea2ff0055ce53544c3815cd642e91 189 SMART SM00287 6 72 1.6E-9 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type Y11_29251 bb6fbb5e34167ca260b7e2e4b69eede8 228 Gene3D G3DSA:1.10.10.10 145 211 1.6E-10 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_29251 bb6fbb5e34167ca260b7e2e4b69eede8 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 2.2E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_29251 bb6fbb5e34167ca260b7e2e4b69eede8 228 SMART SM00421 148 205 0.0012 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_29251 bb6fbb5e34167ca260b7e2e4b69eede8 228 Pfam PF08448 PAS fold 16 125 4.6E-5 T 13-10-2018 IPR013656 PAS fold-4 Y11_29251 bb6fbb5e34167ca260b7e2e4b69eede8 228 SUPERFAMILY SSF46894 140 210 6.12E-12 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_12031 f6caab927d8242ca916f43f45757d255 292 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 2.7E-154 T 13-10-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 Y11_12031 f6caab927d8242ca916f43f45757d255 292 Gene3D G3DSA:3.20.20.70 1 291 1.1E-105 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_12031 f6caab927d8242ca916f43f45757d255 292 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 283 8.0E-96 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Y11_12031 f6caab927d8242ca916f43f45757d255 292 SUPERFAMILY SSF51569 3 283 8.2E-97 T 13-10-2018 Y11_12031 f6caab927d8242ca916f43f45757d255 292 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 84 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Y11_12031 f6caab927d8242ca916f43f45757d255 292 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 4.1E-109 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Y11_12031 f6caab927d8242ca916f43f45757d255 292 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Y11_12031 f6caab927d8242ca916f43f45757d255 292 PIRSF PIRSF001359 1 284 5.8E-113 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Y11_24141 c33fd8d70a23c7a6f29175ca4e378154 422 Pfam PF07196 Flagellin hook IN motif 123 162 1.0E-7 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 Y11_24141 c33fd8d70a23c7a6f29175ca4e378154 422 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 211 409 1.6E-24 T 13-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Y11_24141 c33fd8d70a23c7a6f29175ca4e378154 422 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 21 98 3.5E-10 T 13-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 Y11_32161 947d49311eec3bad5a9d9655ffce823f 450 SMART SM00387 332 440 5.3E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_32161 947d49311eec3bad5a9d9655ffce823f 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 439 9.2E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_32161 947d49311eec3bad5a9d9655ffce823f 450 SUPERFAMILY SSF47384 217 291 8.63E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_32161 947d49311eec3bad5a9d9655ffce823f 450 Pfam PF00672 HAMP domain 182 225 1.2E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_32161 947d49311eec3bad5a9d9655ffce823f 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 1.2E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_32161 947d49311eec3bad5a9d9655ffce823f 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 9.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_32161 947d49311eec3bad5a9d9655ffce823f 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 9.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_32161 947d49311eec3bad5a9d9655ffce823f 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 9.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_32161 947d49311eec3bad5a9d9655ffce823f 450 Gene3D G3DSA:1.10.287.130 178 288 7.3E-21 T 13-10-2018 Y11_32161 947d49311eec3bad5a9d9655ffce823f 450 SMART SM00388 233 293 2.8E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_32161 947d49311eec3bad5a9d9655ffce823f 450 Gene3D G3DSA:3.30.565.10 294 443 5.9E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_32161 947d49311eec3bad5a9d9655ffce823f 450 SUPERFAMILY SSF55874 292 442 6.94E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_32161 947d49311eec3bad5a9d9655ffce823f 450 SMART SM00304 180 232 1.4E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_17901 41c2546bfb747e56e4470b2f6232c91c 367 Pfam PF05076 Suppressor of fused protein (SUFU) 201 363 3.5E-20 T 13-10-2018 IPR020941 Suppressor of fused-like domain Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 Y11_07691 fe4be168f293b48b1f2d702a0a87344f 289 Gene3D G3DSA:3.30.200.20 1 92 2.4E-20 T 13-10-2018 Y11_07691 fe4be168f293b48b1f2d702a0a87344f 289 Pfam PF03881 Fructosamine kinase 1 285 1.9E-117 T 13-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 Y11_07691 fe4be168f293b48b1f2d702a0a87344f 289 Gene3D G3DSA:3.90.1200.10 98 287 8.0E-58 T 13-10-2018 Y11_07691 fe4be168f293b48b1f2d702a0a87344f 289 PIRSF PIRSF006221 1 287 1.7E-93 T 13-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 Y11_07691 fe4be168f293b48b1f2d702a0a87344f 289 SUPERFAMILY SSF56112 3 280 7.15E-39 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Y11_36081 ee317a3e0a00aedff987903b02558d71 645 Gene3D G3DSA:3.10.350.10 527 580 1.2E-14 T 13-10-2018 IPR036779 LysM domain superfamily Y11_36081 ee317a3e0a00aedff987903b02558d71 645 Gene3D G3DSA:3.40.630.40 230 474 9.9E-70 T 13-10-2018 Y11_36081 ee317a3e0a00aedff987903b02558d71 645 Pfam PF11741 AMIN domain 45 139 1.7E-7 T 13-10-2018 IPR021731 AMIN domain Y11_36081 ee317a3e0a00aedff987903b02558d71 645 Gene3D G3DSA:2.60.40.3500 33 145 2.0E-14 T 13-10-2018 Y11_36081 ee317a3e0a00aedff987903b02558d71 645 SUPERFAMILY SSF54106 530 574 1.7E-10 T 13-10-2018 Y11_36081 ee317a3e0a00aedff987903b02558d71 645 Pfam PF01476 LysM domain 532 574 1.6E-11 T 13-10-2018 IPR018392 LysM domain Y11_36081 ee317a3e0a00aedff987903b02558d71 645 Pfam PF01476 LysM domain 601 643 2.8E-14 T 13-10-2018 IPR018392 LysM domain Y11_36081 ee317a3e0a00aedff987903b02558d71 645 SMART SM00646 305 464 1.2E-72 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Y11_36081 ee317a3e0a00aedff987903b02558d71 645 SUPERFAMILY SSF54106 600 643 5.89E-11 T 13-10-2018 Y11_36081 ee317a3e0a00aedff987903b02558d71 645 SUPERFAMILY SSF53187 243 467 4.39E-52 T 13-10-2018 Y11_36081 ee317a3e0a00aedff987903b02558d71 645 SMART SM00257 531 574 8.2E-14 T 13-10-2018 IPR018392 LysM domain Y11_36081 ee317a3e0a00aedff987903b02558d71 645 SMART SM00257 600 643 1.3E-16 T 13-10-2018 IPR018392 LysM domain Y11_36081 ee317a3e0a00aedff987903b02558d71 645 Gene3D G3DSA:3.10.350.10 586 645 2.0E-17 T 13-10-2018 IPR036779 LysM domain superfamily Y11_36081 ee317a3e0a00aedff987903b02558d71 645 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 245 464 3.3E-48 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Y11_13971 8f3639d2dea4f47b113b5e5a69012fae 330 PIRSF PIRSF006278 1 330 2.2E-96 T 13-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase Y11_13971 8f3639d2dea4f47b113b5e5a69012fae 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 318 7.0E-55 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Y11_13971 8f3639d2dea4f47b113b5e5a69012fae 330 Gene3D G3DSA:3.40.50.1100 19 324 1.4E-123 T 13-10-2018 Y11_13971 8f3639d2dea4f47b113b5e5a69012fae 330 SUPERFAMILY SSF53686 8 328 3.01E-86 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y11_13971 8f3639d2dea4f47b113b5e5a69012fae 330 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 2 330 64.405 T 13-10-2018 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 Y11_13971 8f3639d2dea4f47b113b5e5a69012fae 330 Gene3D G3DSA:3.40.50.1100 51 159 1.4E-123 T 13-10-2018 Y11_13971 8f3639d2dea4f47b113b5e5a69012fae 330 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 13 330 9.5E-128 T 13-10-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 Y11_04561 f9b1ce97f77abfa7f455f3bd962c57e1 183 Gene3D G3DSA:3.40.50.10610 13 148 8.3E-7 T 13-10-2018 Y11_04561 f9b1ce97f77abfa7f455f3bd962c57e1 183 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 25 179 7.0E-40 T 13-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component Y11_04561 f9b1ce97f77abfa7f455f3bd962c57e1 183 SUPERFAMILY SSF159594 23 182 6.8E-29 T 13-10-2018 Y11_33411 7318a3b70cb3faed5ff27cccb02eb67b 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 1.8E-48 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Y11_33411 7318a3b70cb3faed5ff27cccb02eb67b 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 164 1.4E-57 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Y11_33411 7318a3b70cb3faed5ff27cccb02eb67b 548 SUPERFAMILY SSF52518 357 545 7.68E-64 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_33411 7318a3b70cb3faed5ff27cccb02eb67b 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 2.2E-216 T 13-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Y11_33411 7318a3b70cb3faed5ff27cccb02eb67b 548 SUPERFAMILY SSF52467 184 342 9.09E-59 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Y11_33411 7318a3b70cb3faed5ff27cccb02eb67b 548 Gene3D G3DSA:3.40.50.970 1 173 3.1E-69 T 13-10-2018 Y11_33411 7318a3b70cb3faed5ff27cccb02eb67b 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 321 1.8E-43 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Y11_33411 7318a3b70cb3faed5ff27cccb02eb67b 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Y11_33411 7318a3b70cb3faed5ff27cccb02eb67b 548 Gene3D G3DSA:3.40.50.1220 186 343 8.9E-121 T 13-10-2018 Y11_33411 7318a3b70cb3faed5ff27cccb02eb67b 548 SUPERFAMILY SSF52518 1 176 3.68E-64 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_33411 7318a3b70cb3faed5ff27cccb02eb67b 548 Gene3D G3DSA:3.40.50.970 344 522 8.9E-121 T 13-10-2018 Y11_27571 4b6d0685bfc40cc3430e26a11927b05c 72 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 7.4E-27 T 13-10-2018 IPR014318 Phage shock protein, PspG Y11_27571 4b6d0685bfc40cc3430e26a11927b05c 72 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 3 65 1.0E-28 T 13-10-2018 IPR014318 Phage shock protein, PspG Y11_10531 69d24c68a48302e3c8aa170d17b00a07 166 Pfam PF03594 Benzoate membrane transport protein 9 166 3.2E-56 T 13-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 Y11_10531 69d24c68a48302e3c8aa170d17b00a07 166 TIGRFAM TIGR00843 benE: benzoate transporter 10 166 8.0E-62 T 13-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 Y11_11131 09cd0b35947d249a1c28ab437e3fbab1 282 Gene3D G3DSA:3.40.50.170 86 282 4.7E-67 T 13-10-2018 Y11_11131 09cd0b35947d249a1c28ab437e3fbab1 282 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 282 6.9E-130 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Y11_11131 09cd0b35947d249a1c28ab437e3fbab1 282 Pfam PF00551 Formyl transferase 88 264 3.6E-53 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Y11_11131 09cd0b35947d249a1c28ab437e3fbab1 282 SUPERFAMILY SSF55021 9 58 2.46E-8 T 13-10-2018 Y11_11131 09cd0b35947d249a1c28ab437e3fbab1 282 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 282 46.068 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Y11_11131 09cd0b35947d249a1c28ab437e3fbab1 282 PIRSF PIRSF036480 6 282 4.3E-115 T 13-10-2018 Y11_11131 09cd0b35947d249a1c28ab437e3fbab1 282 Pfam PF01842 ACT domain 10 70 5.3E-7 T 13-10-2018 IPR002912 ACT domain Y11_11131 09cd0b35947d249a1c28ab437e3fbab1 282 SUPERFAMILY SSF53328 88 281 8.37E-61 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Y11_11131 09cd0b35947d249a1c28ab437e3fbab1 282 Gene3D G3DSA:3.30.70.260 3 84 1.8E-15 T 13-10-2018 Y11_11131 09cd0b35947d249a1c28ab437e3fbab1 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 3.5E-68 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Y11_11131 09cd0b35947d249a1c28ab437e3fbab1 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 3.5E-68 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Y11_11131 09cd0b35947d249a1c28ab437e3fbab1 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 3.5E-68 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Y11_11131 09cd0b35947d249a1c28ab437e3fbab1 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 3.5E-68 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Y11_11131 09cd0b35947d249a1c28ab437e3fbab1 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 3.5E-68 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Y11_11131 09cd0b35947d249a1c28ab437e3fbab1 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 43 55 3.5E-68 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Y11_36741 d0d9bac1be817786de5236d44201e126 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_36741 d0d9bac1be817786de5236d44201e126 89 Gene3D G3DSA:1.10.287.10 2 89 7.4E-37 T 13-10-2018 Y11_36741 d0d9bac1be817786de5236d44201e126 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 1.0E-39 T 13-10-2018 Y11_36741 d0d9bac1be817786de5236d44201e126 89 SUPERFAMILY SSF47060 3 89 2.68E-34 T 13-10-2018 IPR009068 S15/NS1, RNA-binding Y11_36741 d0d9bac1be817786de5236d44201e126 89 SMART SM01387 8 88 6.4E-51 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_36741 d0d9bac1be817786de5236d44201e126 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.1E-39 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36741 d0d9bac1be817786de5236d44201e126 89 Pfam PF00312 Ribosomal protein S15 8 88 5.0E-37 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_36741 d0d9bac1be817786de5236d44201e126 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.735 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_19051 74169b3488378bd5549dbc8a931bca90 396 Gene3D G3DSA:3.30.9.50 87 274 4.3E-103 T 13-10-2018 Y11_19051 74169b3488378bd5549dbc8a931bca90 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 6.5E-18 T 13-10-2018 Y11_19051 74169b3488378bd5549dbc8a931bca90 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 6.5E-18 T 13-10-2018 Y11_19051 74169b3488378bd5549dbc8a931bca90 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 6.5E-18 T 13-10-2018 Y11_19051 74169b3488378bd5549dbc8a931bca90 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 162 177 6.5E-18 T 13-10-2018 Y11_19051 74169b3488378bd5549dbc8a931bca90 396 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 12 395 7.8E-126 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Y11_19051 74169b3488378bd5549dbc8a931bca90 396 Pfam PF01494 FAD binding domain 156 344 9.2E-18 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 Y11_19051 74169b3488378bd5549dbc8a931bca90 396 Pfam PF01494 FAD binding domain 11 83 4.3E-6 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 Y11_19051 74169b3488378bd5549dbc8a931bca90 396 Gene3D G3DSA:3.50.50.60 12 343 4.3E-103 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_19051 74169b3488378bd5549dbc8a931bca90 396 SUPERFAMILY SSF51905 10 387 1.79E-57 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_23341 a5c76308241284cf9ed2764bc51dc5f1 377 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 234 248 - T 13-10-2018 IPR001482 Type II/IV secretion system protein Y11_23341 a5c76308241284cf9ed2764bc51dc5f1 377 Gene3D G3DSA:3.30.450.90 38 140 7.1E-23 T 13-10-2018 Y11_23341 a5c76308241284cf9ed2764bc51dc5f1 377 Gene3D G3DSA:3.40.50.300 144 377 8.7E-87 T 13-10-2018 Y11_23341 a5c76308241284cf9ed2764bc51dc5f1 377 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 46 372 6.6E-125 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Y11_23341 a5c76308241284cf9ed2764bc51dc5f1 377 Pfam PF00437 Type II/IV secretion system protein 53 309 7.2E-43 T 13-10-2018 IPR001482 Type II/IV secretion system protein Y11_23341 a5c76308241284cf9ed2764bc51dc5f1 377 SUPERFAMILY SSF52540 24 371 1.76E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_20411 f4d40ab1df9cc13dfcc67dc232978ee7 588 SMART SM00382 361 547 4.8E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_20411 f4d40ab1df9cc13dfcc67dc232978ee7 588 Gene3D G3DSA:1.20.1560.10 2 319 8.3E-74 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_20411 f4d40ab1df9cc13dfcc67dc232978ee7 588 Gene3D G3DSA:3.40.50.300 326 586 1.1E-79 T 13-10-2018 Y11_20411 f4d40ab1df9cc13dfcc67dc232978ee7 588 SUPERFAMILY SSF52540 327 572 1.78E-80 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_20411 f4d40ab1df9cc13dfcc67dc232978ee7 588 Pfam PF00005 ABC transporter 352 500 2.4E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_20411 f4d40ab1df9cc13dfcc67dc232978ee7 588 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_20411 f4d40ab1df9cc13dfcc67dc232978ee7 588 Pfam PF00664 ABC transporter transmembrane region 21 291 1.7E-37 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Y11_20411 f4d40ab1df9cc13dfcc67dc232978ee7 588 SUPERFAMILY SSF90123 7 319 3.53E-70 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_10751 9998b5c4f28f912929cd55585cd26827 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 1.5E-24 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Y11_10751 9998b5c4f28f912929cd55585cd26827 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 1.5E-24 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Y11_10751 9998b5c4f28f912929cd55585cd26827 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 1.5E-24 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Y11_10751 9998b5c4f28f912929cd55585cd26827 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 1.5E-24 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Y11_10751 9998b5c4f28f912929cd55585cd26827 520 PIRSF PIRSF001373 1 520 3.3E-251 T 13-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Y11_10751 9998b5c4f28f912929cd55585cd26827 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 1.4E-247 T 13-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Y11_10751 9998b5c4f28f912929cd55585cd26827 520 Gene3D G3DSA:3.60.120.10 1 520 4.8E-198 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Y11_10751 9998b5c4f28f912929cd55585cd26827 520 Pfam PF00425 chorismate binding enzyme 242 502 2.2E-84 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Y11_10751 9998b5c4f28f912929cd55585cd26827 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 193 1.3E-16 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Y11_10751 9998b5c4f28f912929cd55585cd26827 520 SUPERFAMILY SSF56322 7 515 2.22E-165 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Y11_28161 565a2fd799ede53726702e8f6e5120c2 105 Hamap MF_00744 Met repressor [metJ]. 1 105 40.23 T 13-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 Y11_28161 565a2fd799ede53726702e8f6e5120c2 105 Gene3D G3DSA:1.10.140.10 2 105 7.7E-63 T 13-10-2018 IPR023453 Methionine repressor MetJ domain superfamily Y11_28161 565a2fd799ede53726702e8f6e5120c2 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 5.3E-58 T 13-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 Y11_28161 565a2fd799ede53726702e8f6e5120c2 105 SUPERFAMILY SSF47598 2 105 3.78E-57 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Y11_28161 565a2fd799ede53726702e8f6e5120c2 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 8.0E-49 T 13-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 Y11_18511 0b35bb2b7195dc8a7ed3344c92109f82 95 Gene3D G3DSA:3.10.129.10 1 95 3.2E-23 T 13-10-2018 Y11_18511 0b35bb2b7195dc8a7ed3344c92109f82 95 SUPERFAMILY SSF54637 2 94 6.01E-20 T 13-10-2018 IPR029069 HotDog domain superfamily Y11_18511 0b35bb2b7195dc8a7ed3344c92109f82 95 Pfam PF03061 Thioesterase superfamily 17 65 1.0E-8 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Y11_18511 0b35bb2b7195dc8a7ed3344c92109f82 95 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 1 87 8.7E-23 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Y11_18511 0b35bb2b7195dc8a7ed3344c92109f82 95 PIRSF PIRSF003230 1 95 1.4E-24 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Y11_31681 744b81882bc6302f585af3bc703dc5c7 277 SUPERFAMILY SSF46689 11 85 2.69E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_31681 744b81882bc6302f585af3bc703dc5c7 277 Pfam PF01380 SIS domain 142 268 4.6E-24 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_31681 744b81882bc6302f585af3bc703dc5c7 277 Gene3D G3DSA:3.40.50.10490 111 277 5.6E-36 T 13-10-2018 Y11_31681 744b81882bc6302f585af3bc703dc5c7 277 Gene3D G3DSA:1.10.10.10 6 83 5.0E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_31681 744b81882bc6302f585af3bc703dc5c7 277 SUPERFAMILY SSF53697 117 270 6.27E-27 T 13-10-2018 Y11_31681 744b81882bc6302f585af3bc703dc5c7 277 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 80 7.1E-13 T 13-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Y11_05981 1d5a9fda8b51f854e05b76ac03037084 103 Pfam PF06411 HdeA/HdeB family 8 91 6.3E-21 T 13-10-2018 IPR010486 HNS-dependent expression A/B Y11_05981 1d5a9fda8b51f854e05b76ac03037084 103 Gene3D G3DSA:1.10.890.10 25 101 2.7E-34 T 13-10-2018 IPR038303 HNS-dependent expression A/B superfamily Y11_05981 1d5a9fda8b51f854e05b76ac03037084 103 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 29 98 1.0E-24 T 13-10-2018 Y11_05981 1d5a9fda8b51f854e05b76ac03037084 103 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 1 98 28.574 T 13-10-2018 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 Y11_09751 bbd9033a5edce3c57625eb626a1259de 40 Pfam PF07338 Protein of unknown function (DUF1471) 1 38 9.8E-15 T 13-10-2018 IPR010854 Domain of unknown function DUF1471 Y11_09751 bbd9033a5edce3c57625eb626a1259de 40 SUPERFAMILY SSF159871 1 39 3.53E-14 T 13-10-2018 IPR036275 YdgH-like superfamily Y11_09751 bbd9033a5edce3c57625eb626a1259de 40 Gene3D G3DSA:3.30.1660.10 1 40 1.8E-17 T 13-10-2018 IPR025543 Dodecin-like Y11_p1051 18d06e3c8ccb818ea7249c17a7ec3c05 86 Pfam PF00665 Integrase core domain 10 84 7.6E-13 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_p1051 18d06e3c8ccb818ea7249c17a7ec3c05 86 SUPERFAMILY SSF53098 2 84 1.31E-15 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_p1051 18d06e3c8ccb818ea7249c17a7ec3c05 86 Gene3D G3DSA:3.30.420.10 2 86 4.1E-6 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_04661 a8a3b71e2c25ea98c7c8389914e2e832 92 Gene3D G3DSA:1.10.150.20 1 84 6.0E-19 T 13-10-2018 Y11_04661 a8a3b71e2c25ea98c7c8389914e2e832 92 Pfam PF04994 TfoX C-terminal domain 1 77 1.6E-22 T 13-10-2018 IPR007077 TfoX, C-terminal Y11_30921 372ea2e0f803eff8d0070971d41c676f 285 Pfam PF13708 Domain of unknown function (DUF4942) 85 272 1.2E-60 T 13-10-2018 IPR031339 Domain of unknown function DUF4942 Y11_06871 4b589d7e2b0bc951e34d23031a0dddab 381 Pfam PF02687 FtsX-like permease family 335 378 2.8E-8 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Y11_08951 1a2aa8318a96454060a8e4de03051df6 123 PIRSF PIRSF025560 1 123 1.8E-41 T 13-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 Y11_08951 1a2aa8318a96454060a8e4de03051df6 123 Pfam PF07027 Protein of unknown function (DUF1318) 35 123 1.3E-29 T 13-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 Y11_16151 dc953130acc9b8827664642ef843d923 98 Pfam PF00936 BMC domain 5 80 1.3E-28 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Y11_16151 dc953130acc9b8827664642ef843d923 98 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 22 41 - T 13-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Y11_16151 dc953130acc9b8827664642ef843d923 98 SUPERFAMILY SSF143414 4 93 1.83E-32 T 13-10-2018 IPR037233 CcmK-like superfamily Y11_16151 dc953130acc9b8827664642ef843d923 98 Gene3D G3DSA:3.30.70.1710 1 98 1.5E-42 T 13-10-2018 Y11_16151 dc953130acc9b8827664642ef843d923 98 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 48 3.0E-18 T 13-10-2018 Y11_16151 dc953130acc9b8827664642ef843d923 98 SMART SM00877 4 80 5.0E-36 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Y11_23551 c1d5db3cb84088d46bd91de33aeb3e77 90 Pfam PF03811 InsA N-terminal domain 2 35 2.0E-18 T 13-10-2018 IPR003220 InsA N-terminal domain GO:0006313 Y11_23551 c1d5db3cb84088d46bd91de33aeb3e77 90 Pfam PF12759 InsA C-terminal domain 42 87 1.1E-30 T 13-10-2018 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain Y11_00061 f356a16a000d4d0c2cef32e91bc77ea9 189 SUPERFAMILY SSF55021 7 87 5.83E-17 T 13-10-2018 Y11_00061 f356a16a000d4d0c2cef32e91bc77ea9 189 Gene3D G3DSA:3.30.70.260 5 89 8.1E-26 T 13-10-2018 Y11_00061 f356a16a000d4d0c2cef32e91bc77ea9 189 PIRSF PIRSF028103 5 180 1.2E-64 T 13-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 Y11_00061 f356a16a000d4d0c2cef32e91bc77ea9 189 SUPERFAMILY SSF55021 91 179 2.12E-18 T 13-10-2018 Y11_00061 f356a16a000d4d0c2cef32e91bc77ea9 189 Pfam PF13740 ACT domain 7 82 4.0E-26 T 13-10-2018 Y11_00061 f356a16a000d4d0c2cef32e91bc77ea9 189 Gene3D G3DSA:3.30.70.260 91 188 3.5E-32 T 13-10-2018 Y11_20661 5477a2c7098a5db76926135252900fe0 454 Gene3D G3DSA:1.20.1250.20 3 389 1.1E-99 T 13-10-2018 Y11_20661 5477a2c7098a5db76926135252900fe0 454 SUPERFAMILY SSF103473 1 390 4.05E-61 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_20661 5477a2c7098a5db76926135252900fe0 454 Pfam PF07690 Major Facilitator Superfamily 20 350 1.8E-39 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_20661 5477a2c7098a5db76926135252900fe0 454 Gene3D G3DSA:3.30.70.100 390 454 8.5E-27 T 13-10-2018 Y11_38461 7c42ec7f263a7ad54638f4328e93b2b4 295 Gene3D G3DSA:3.40.50.620 1 169 2.0E-57 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_38461 7c42ec7f263a7ad54638f4328e93b2b4 295 SUPERFAMILY SSF52374 1 158 3.85E-35 T 13-10-2018 Y11_38461 7c42ec7f263a7ad54638f4328e93b2b4 295 Pfam PF01687 Riboflavin kinase 167 289 4.8E-36 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Y11_38461 7c42ec7f263a7ad54638f4328e93b2b4 295 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 1 289 1.1E-110 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Y11_38461 7c42ec7f263a7ad54638f4328e93b2b4 295 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 1 34 3.7E-7 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Y11_38461 7c42ec7f263a7ad54638f4328e93b2b4 295 Gene3D G3DSA:2.40.30.30 171 293 1.0E-37 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Y11_38461 7c42ec7f263a7ad54638f4328e93b2b4 295 PIRSF PIRSF004491 1 293 1.7E-99 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Y11_38461 7c42ec7f263a7ad54638f4328e93b2b4 295 SUPERFAMILY SSF82114 157 290 9.81E-43 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Y11_38461 7c42ec7f263a7ad54638f4328e93b2b4 295 SMART SM00904 166 290 5.4E-61 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Y11_38461 7c42ec7f263a7ad54638f4328e93b2b4 295 Pfam PF06574 FAD synthetase 1 150 1.0E-54 T 13-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Y11_33001 5e8a0524dabb069c2dce085b3d078252 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 13-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33001 5e8a0524dabb069c2dce085b3d078252 101 SUPERFAMILY SSF57716 2 101 1.71E-36 T 13-10-2018 Y11_33001 5e8a0524dabb069c2dce085b3d078252 101 Gene3D G3DSA:4.10.830.10 41 101 1.8E-23 T 13-10-2018 Y11_33001 5e8a0524dabb069c2dce085b3d078252 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.8E-26 T 13-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_33001 5e8a0524dabb069c2dce085b3d078252 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.588 T 13-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid Y11_19271 420639732dbbe67c7a688118997a9d00 403 Gene3D G3DSA:2.60.410.10 292 383 1.6E-27 T 13-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_19271 420639732dbbe67c7a688118997a9d00 403 SUPERFAMILY SSF56601 9 292 3.06E-78 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_19271 420639732dbbe67c7a688118997a9d00 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 4.4E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Y11_19271 420639732dbbe67c7a688118997a9d00 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 4.4E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Y11_19271 420639732dbbe67c7a688118997a9d00 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 4.4E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Y11_19271 420639732dbbe67c7a688118997a9d00 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 272 1.3E-98 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Y11_19271 420639732dbbe67c7a688118997a9d00 403 SUPERFAMILY SSF69189 292 385 4.51E-25 T 13-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_19271 420639732dbbe67c7a688118997a9d00 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 383 5.1E-25 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_19271 420639732dbbe67c7a688118997a9d00 403 Gene3D G3DSA:3.40.710.10 30 291 1.3E-89 T 13-10-2018 Y11_19271 420639732dbbe67c7a688118997a9d00 403 SMART SM00936 292 383 6.2E-34 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 Hamap MF_01881 Propionate kinase [tdcD]. 1 402 77.863 T 13-10-2018 IPR024917 Propionate kinase KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 TIGRFAM TIGR00016 ackA: acetate kinase 6 392 9.5E-154 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 PRINTS PR00471 Acetate kinase family signature 7 18 1.2E-46 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 PRINTS PR00471 Acetate kinase family signature 199 220 1.2E-46 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 PRINTS PR00471 Acetate kinase family signature 374 386 1.2E-46 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 PRINTS PR00471 Acetate kinase family signature 169 182 1.2E-46 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 PRINTS PR00471 Acetate kinase family signature 296 309 1.2E-46 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 PRINTS PR00471 Acetate kinase family signature 318 334 1.2E-46 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 PIRSF PIRSF000722 3 397 1.4E-136 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 Hamap MF_00020 Acetate kinase [ackA]. 1 397 163.86 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 Gene3D G3DSA:3.30.420.40 192 401 7.4E-79 T 13-10-2018 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 SUPERFAMILY SSF53067 6 191 6.99E-63 T 13-10-2018 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 SUPERFAMILY SSF53067 153 392 8.98E-84 T 13-10-2018 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 Gene3D G3DSA:3.30.420.40 4 191 9.1E-71 T 13-10-2018 Y11_35781 3c5427d8748fdd96ccb609b32564677a 406 Pfam PF00871 Acetokinase family 7 386 1.8E-148 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Y11_20071 657210682adb89e6de7bacfa1bf92fad 187 Pfam PF00156 Phosphoribosyl transferase domain 35 177 6.7E-15 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Y11_20071 657210682adb89e6de7bacfa1bf92fad 187 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 15 183 2.8E-71 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Y11_20071 657210682adb89e6de7bacfa1bf92fad 187 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 15 184 38.631 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Y11_20071 657210682adb89e6de7bacfa1bf92fad 187 SUPERFAMILY SSF53271 18 184 4.83E-52 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Y11_20071 657210682adb89e6de7bacfa1bf92fad 187 Gene3D G3DSA:3.40.50.2020 2 187 2.6E-68 T 13-10-2018 Y11_08421 212a8781e8d2e8de593532ee95b7e897 285 Gene3D G3DSA:2.40.30.170 185 231 4.5E-38 T 13-10-2018 Y11_08421 212a8781e8d2e8de593532ee95b7e897 285 Pfam PF13437 HlyD family secretion protein 154 236 4.5E-9 T 13-10-2018 Y11_08421 212a8781e8d2e8de593532ee95b7e897 285 Pfam PF13533 Biotin-lipoyl like 45 91 9.6E-16 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Y11_08421 212a8781e8d2e8de593532ee95b7e897 285 Gene3D G3DSA:1.10.287.470 78 150 4.5E-38 T 13-10-2018 Y11_08421 212a8781e8d2e8de593532ee95b7e897 285 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 229 4.1E-38 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Y11_08421 212a8781e8d2e8de593532ee95b7e897 285 Gene3D G3DSA:2.40.50.100 43 184 4.5E-38 T 13-10-2018 Y11_08421 212a8781e8d2e8de593532ee95b7e897 285 SUPERFAMILY SSF111369 43 215 1.14E-27 T 13-10-2018 Y11_25741 11cb76f59fb5433625708840a7aa323a 974 Pfam PF03797 Autotransporter beta-domain 708 951 1.4E-35 T 13-10-2018 IPR005546 Autotransporter beta-domain Y11_25741 11cb76f59fb5433625708840a7aa323a 974 Gene3D G3DSA:2.160.20.20 344 525 2.9E-38 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily Y11_25741 11cb76f59fb5433625708840a7aa323a 974 SUPERFAMILY SSF103515 671 974 3.66E-38 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Y11_25741 11cb76f59fb5433625708840a7aa323a 974 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 405 974 9.2E-82 T 13-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 Y11_25741 11cb76f59fb5433625708840a7aa323a 974 Gene3D G3DSA:2.160.20.20 75 251 6.9E-12 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily Y11_25741 11cb76f59fb5433625708840a7aa323a 974 SUPERFAMILY SSF51126 94 524 5.34E-30 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor Y11_25741 11cb76f59fb5433625708840a7aa323a 974 SMART SM00869 705 963 1.9E-29 T 13-10-2018 IPR005546 Autotransporter beta-domain Y11_25741 11cb76f59fb5433625708840a7aa323a 974 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 181 210 5.6E-5 T 13-10-2018 IPR030930 Adhesin of bacterial autotransporter system Y11_25741 11cb76f59fb5433625708840a7aa323a 974 Gene3D G3DSA:2.40.128.130 663 974 7.5E-72 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Y11_30621 89d8b18729ed4ff554437cfc0e9f9070 510 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_30621 89d8b18729ed4ff554437cfc0e9f9070 510 Gene3D G3DSA:3.40.50.300 3 240 1.4E-51 T 13-10-2018 Y11_30621 89d8b18729ed4ff554437cfc0e9f9070 510 SMART SM00382 286 482 8.5E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_30621 89d8b18729ed4ff554437cfc0e9f9070 510 SMART SM00382 29 219 4.9E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_30621 89d8b18729ed4ff554437cfc0e9f9070 510 Pfam PF00005 ABC transporter 278 433 3.2E-18 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_30621 89d8b18729ed4ff554437cfc0e9f9070 510 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 502 3.8E-265 T 13-10-2018 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 Y11_30621 89d8b18729ed4ff554437cfc0e9f9070 510 Gene3D G3DSA:3.40.50.300 256 509 2.3E-43 T 13-10-2018 Y11_30621 89d8b18729ed4ff554437cfc0e9f9070 510 SUPERFAMILY SSF52540 3 229 2.33E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_30621 89d8b18729ed4ff554437cfc0e9f9070 510 SUPERFAMILY SSF52540 244 485 6.88E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_30621 89d8b18729ed4ff554437cfc0e9f9070 510 Pfam PF00005 ABC transporter 20 171 4.1E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_36931 264f21f4b41e08d5079c47dd23e13a26 437 SUPERFAMILY SSF53850 32 429 2.29E-78 T 13-10-2018 Y11_36931 264f21f4b41e08d5079c47dd23e13a26 437 Pfam PF01547 Bacterial extracellular solute-binding protein 47 340 8.5E-36 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein Y11_36931 264f21f4b41e08d5079c47dd23e13a26 437 Gene3D G3DSA:3.40.190.10 31 434 3.6E-75 T 13-10-2018 Y11_18841 318d50ff777b500a10f23f6b79a5034e 229 Gene3D G3DSA:3.40.50.2300 1 125 1.6E-34 T 13-10-2018 Y11_18841 318d50ff777b500a10f23f6b79a5034e 229 SUPERFAMILY SSF52172 4 181 1.57E-38 T 13-10-2018 IPR011006 CheY-like superfamily Y11_18841 318d50ff777b500a10f23f6b79a5034e 229 Pfam PF00072 Response regulator receiver domain 8 117 5.6E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_18841 318d50ff777b500a10f23f6b79a5034e 229 SMART SM00862 151 227 1.3E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_18841 318d50ff777b500a10f23f6b79a5034e 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 227 3.8E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_18841 318d50ff777b500a10f23f6b79a5034e 229 SMART SM00448 6 116 4.8E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_18841 318d50ff777b500a10f23f6b79a5034e 229 Gene3D G3DSA:1.10.10.10 126 229 2.2E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_14681 d98516912697dabbc2380c490fe88976 193 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 193 3.0E-112 T 13-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 Y11_14681 d98516912697dabbc2380c490fe88976 193 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 187 46.422 T 13-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 Y11_14681 d98516912697dabbc2380c490fe88976 193 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 173 2.9E-84 T 13-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 Y11_14681 d98516912697dabbc2380c490fe88976 193 SUPERFAMILY SSF160930 5 161 1.23E-65 T 13-10-2018 Y11_14681 d98516912697dabbc2380c490fe88976 193 PIRSF PIRSF003159 1 182 6.3E-91 T 13-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 Y11_35601 fac1a6d1ede72129092a2f305bb211ff 928 Gene3D G3DSA:3.30.830.10 520 728 3.4E-12 T 13-10-2018 Y11_35601 fac1a6d1ede72129092a2f305bb211ff 928 Gene3D G3DSA:3.30.830.10 31 250 3.6E-55 T 13-10-2018 Y11_35601 fac1a6d1ede72129092a2f305bb211ff 928 SUPERFAMILY SSF63411 33 249 9.72E-42 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Y11_35601 fac1a6d1ede72129092a2f305bb211ff 928 SUPERFAMILY SSF63411 744 923 1.83E-17 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Y11_35601 fac1a6d1ede72129092a2f305bb211ff 928 Gene3D G3DSA:3.30.830.10 740 927 7.4E-22 T 13-10-2018 Y11_35601 fac1a6d1ede72129092a2f305bb211ff 928 Pfam PF05193 Peptidase M16 inactive domain 680 859 1.1E-12 T 13-10-2018 IPR007863 Peptidase M16, C-terminal Y11_35601 fac1a6d1ede72129092a2f305bb211ff 928 Pfam PF05193 Peptidase M16 inactive domain 211 386 2.0E-5 T 13-10-2018 IPR007863 Peptidase M16, C-terminal Y11_35601 fac1a6d1ede72129092a2f305bb211ff 928 Pfam PF00675 Insulinase (Peptidase family M16) 54 165 4.1E-22 T 13-10-2018 IPR011765 Peptidase M16, N-terminal Y11_35601 fac1a6d1ede72129092a2f305bb211ff 928 SUPERFAMILY SSF63411 515 728 3.48E-17 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Y11_35601 fac1a6d1ede72129092a2f305bb211ff 928 SUPERFAMILY SSF63411 347 464 9.17E-6 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Y11_35601 fac1a6d1ede72129092a2f305bb211ff 928 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 64 87 - T 13-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 Y11_35601 fac1a6d1ede72129092a2f305bb211ff 928 Gene3D G3DSA:3.30.830.10 340 474 3.7E-8 T 13-10-2018 Y11_38641 1ecd61d765442bff0d070477d847bcd4 275 SUPERFAMILY SSF46565 131 271 3.03E-27 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Y11_38641 1ecd61d765442bff0d070477d847bcd4 275 Pfam PF05099 Tellurite resistance protein TerB 45 170 2.5E-11 T 13-10-2018 IPR007791 Co-chaperone DjlA, N-terminal Y11_38641 1ecd61d765442bff0d070477d847bcd4 275 Gene3D G3DSA:1.10.287.110 190 273 3.0E-13 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Y11_38641 1ecd61d765442bff0d070477d847bcd4 275 PRINTS PR00625 DnaJ domain signature 253 273 1.4E-6 T 13-10-2018 IPR001623 DnaJ domain Y11_38641 1ecd61d765442bff0d070477d847bcd4 275 PRINTS PR00625 DnaJ domain signature 211 229 1.4E-6 T 13-10-2018 IPR001623 DnaJ domain Y11_38641 1ecd61d765442bff0d070477d847bcd4 275 PRINTS PR00625 DnaJ domain signature 229 244 1.4E-6 T 13-10-2018 IPR001623 DnaJ domain Y11_38641 1ecd61d765442bff0d070477d847bcd4 275 Gene3D G3DSA:1.10.3680.10 37 182 9.4E-21 T 13-10-2018 IPR029024 TerB-like Y11_38641 1ecd61d765442bff0d070477d847bcd4 275 SMART SM00271 208 273 5.7E-16 T 13-10-2018 IPR001623 DnaJ domain Y11_38641 1ecd61d765442bff0d070477d847bcd4 275 Pfam PF00226 DnaJ domain 212 271 1.2E-9 T 13-10-2018 IPR001623 DnaJ domain Y11_38641 1ecd61d765442bff0d070477d847bcd4 275 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 274 40.222 T 13-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 Y11_37211 d854b567ea8436b7705ed217b32bdfb4 292 SUPERFAMILY SSF52540 10 245 1.04E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_37211 d854b567ea8436b7705ed217b32bdfb4 292 Gene3D G3DSA:3.40.50.300 3 283 5.2E-69 T 13-10-2018 Y11_37211 d854b567ea8436b7705ed217b32bdfb4 292 Pfam PF00005 ABC transporter 22 191 6.2E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_37211 d854b567ea8436b7705ed217b32bdfb4 292 SMART SM00382 29 241 6.2E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_12891 13dec9253637e759f3432548b619653a 118 Gene3D G3DSA:3.10.450.40 7 118 7.6E-22 T 13-10-2018 Y11_12891 13dec9253637e759f3432548b619653a 118 Pfam PF04965 Gene 25-like lysozyme 21 100 5.5E-16 T 13-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD Y11_12891 13dec9253637e759f3432548b619653a 118 SUPERFAMILY SSF160719 14 115 1.2E-29 T 13-10-2018 Y11_24311 6ca7ba31897a81d6e23d0e3ef7692d62 397 Pfam PF07559 Flagellar basal body protein FlaE 173 278 4.1E-16 T 13-10-2018 IPR011491 Flagellar hook protein FlgE Y11_24311 6ca7ba31897a81d6e23d0e3ef7692d62 397 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 325 394 7.9E-17 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Y11_24311 6ca7ba31897a81d6e23d0e3ef7692d62 397 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 379 6.9E-93 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Y11_24311 6ca7ba31897a81d6e23d0e3ef7692d62 397 SUPERFAMILY SSF117143 73 358 8.89E-77 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Y11_24311 6ca7ba31897a81d6e23d0e3ef7692d62 397 Pfam PF00460 Flagella basal body rod protein 4 33 4.3E-7 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Y11_24311 6ca7ba31897a81d6e23d0e3ef7692d62 397 Gene3D G3DSA:2.60.98.20 144 279 9.3E-26 T 13-10-2018 IPR037058 Flagellar hook protein FlgE superfamily Y11_23831 0d422c89ffb881f0a599f5aed4f50daa 539 Gene3D G3DSA:1.20.58.220 333 429 3.6E-5 T 13-10-2018 IPR038078 PhoU-like domain superfamily Y11_23831 0d422c89ffb881f0a599f5aed4f50daa 539 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 307 4.8E-102 T 13-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 Y11_23831 0d422c89ffb881f0a599f5aed4f50daa 539 Pfam PF02690 Na+/Pi-cotransporter 13 147 2.9E-34 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Y11_23831 0d422c89ffb881f0a599f5aed4f50daa 539 Pfam PF02690 Na+/Pi-cotransporter 159 251 6.3E-9 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Y11_23831 0d422c89ffb881f0a599f5aed4f50daa 539 SUPERFAMILY SSF109755 321 531 7.33E-24 T 13-10-2018 Y11_23831 0d422c89ffb881f0a599f5aed4f50daa 539 Pfam PF01895 PhoU domain 340 421 1.2E-5 T 13-10-2018 IPR026022 PhoU domain Y11_23831 0d422c89ffb881f0a599f5aed4f50daa 539 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 520 7.2E-107 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Y11_26491 78774968bf238405b152d6b0d2cb3d79 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_26491 78774968bf238405b152d6b0d2cb3d79 241 SMART SM00382 28 231 3.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_26491 78774968bf238405b152d6b0d2cb3d79 241 Pfam PF00005 ABC transporter 20 166 2.4E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_26491 78774968bf238405b152d6b0d2cb3d79 241 SUPERFAMILY SSF52540 4 236 2.25E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_26491 78774968bf238405b152d6b0d2cb3d79 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 6.3E-9 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Y11_26491 78774968bf238405b152d6b0d2cb3d79 241 Gene3D G3DSA:3.40.50.300 2 241 4.1E-71 T 13-10-2018 Y11_26491 78774968bf238405b152d6b0d2cb3d79 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 1.7E-121 T 13-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 Y11_24561 4e5d97ecb1efc5fac28720ef6be1af3f 199 SUPERFAMILY SSF46894 18 99 4.25E-7 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_24561 4e5d97ecb1efc5fac28720ef6be1af3f 199 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 99 1.0E-4 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_24561 4e5d97ecb1efc5fac28720ef6be1af3f 199 Gene3D G3DSA:1.10.10.10 2 105 4.8E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_42111 add6e6bcf54a522ae21dd6c5d8c66e1e 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.3E-33 T 13-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 Y11_42111 add6e6bcf54a522ae21dd6c5d8c66e1e 144 Gene3D G3DSA:3.30.530.20 3 143 5.9E-40 T 13-10-2018 IPR023393 START-like domain superfamily Y11_42111 add6e6bcf54a522ae21dd6c5d8c66e1e 144 SUPERFAMILY SSF55961 1 142 9.31E-36 T 13-10-2018 Y11_20911 a4ef83b5ba62bccf70049addf17696ad 362 Gene3D G3DSA:2.40.10.240 64 163 4.3E-116 T 13-10-2018 Y11_20911 a4ef83b5ba62bccf70049addf17696ad 362 Pfam PF02547 Queuosine biosynthesis protein 4 343 7.6E-131 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Y11_20911 a4ef83b5ba62bccf70049addf17696ad 362 Gene3D G3DSA:3.40.1780.10 14 343 4.3E-116 T 13-10-2018 Y11_20911 a4ef83b5ba62bccf70049addf17696ad 362 SUPERFAMILY SSF111337 1 343 3.79E-137 T 13-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Y11_20911 a4ef83b5ba62bccf70049addf17696ad 362 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 343 1.8E-159 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Y11_20911 a4ef83b5ba62bccf70049addf17696ad 362 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 47.004 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Y11_40201 b2d8ce2d2e83301b9332221b1edca458 198 Gene3D G3DSA:1.10.10.10 86 152 3.7E-5 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_40201 b2d8ce2d2e83301b9332221b1edca458 198 Gene3D G3DSA:1.10.3290.10 1 78 1.3E-6 T 13-10-2018 IPR036597 Fido-like domain superfamily Y11_31621 f47e5d679e1347f0de250db9363c9474 265 Gene3D G3DSA:3.30.1240.10 82 188 5.2E-57 T 13-10-2018 Y11_31621 f47e5d679e1347f0de250db9363c9474 265 Gene3D G3DSA:3.40.50.1000 5 258 5.2E-57 T 13-10-2018 IPR023214 HAD superfamily Y11_31621 f47e5d679e1347f0de250db9363c9474 265 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 231 2.1E-20 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Y11_31621 f47e5d679e1347f0de250db9363c9474 265 SUPERFAMILY SSF56784 1 262 3.6E-56 T 13-10-2018 IPR036412 HAD-like superfamily Y11_31621 f47e5d679e1347f0de250db9363c9474 265 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 13-10-2018 Y11_31621 f47e5d679e1347f0de250db9363c9474 265 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 255 3.4E-43 T 13-10-2018 Y11_31621 f47e5d679e1347f0de250db9363c9474 265 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 257 1.6E-40 T 13-10-2018 IPR000150 Cof family GO:0016787 Y11_27791 66d46f7521c795bc66d1b0a12606af53 555 Gene3D G3DSA:3.10.20.310 64 152 1.0E-7 T 13-10-2018 Y11_27791 66d46f7521c795bc66d1b0a12606af53 555 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 209 517 1.4E-96 T 13-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal Y11_27791 66d46f7521c795bc66d1b0a12606af53 555 Pfam PF17287 POTRA domain 154 204 1.1E-14 T 13-10-2018 IPR035251 ShlB, POTRA domain Y11_27791 66d46f7521c795bc66d1b0a12606af53 555 Pfam PF08479 POTRA domain, ShlB-type 79 152 6.6E-17 T 13-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type Y11_27791 66d46f7521c795bc66d1b0a12606af53 555 Gene3D G3DSA:2.40.160.50 181 555 4.0E-76 T 13-10-2018 Y11_27791 66d46f7521c795bc66d1b0a12606af53 555 PIRSF PIRSF029745 1 555 1.4E-129 T 13-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 Y11_p0481 6d14a702f89d95c662ab81eca7e95eca 130 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 99 117 2.3E-59 T 13-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 Y11_p0481 6d14a702f89d95c662ab81eca7e95eca 130 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 29 50 2.3E-59 T 13-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 Y11_p0481 6d14a702f89d95c662ab81eca7e95eca 130 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 4 27 2.3E-59 T 13-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 Y11_p0481 6d14a702f89d95c662ab81eca7e95eca 130 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 62 78 2.3E-59 T 13-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 Y11_p0481 6d14a702f89d95c662ab81eca7e95eca 130 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 81 99 2.3E-59 T 13-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 Y11_p0481 6d14a702f89d95c662ab81eca7e95eca 130 SUPERFAMILY SSF69635 3 129 3.92E-45 T 13-10-2018 Y11_p0481 6d14a702f89d95c662ab81eca7e95eca 130 Pfam PF05932 Tir chaperone protein (CesT) family 6 118 3.0E-24 T 13-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 Y11_p0481 6d14a702f89d95c662ab81eca7e95eca 130 Gene3D G3DSA:3.30.1460.10 1 130 1.7E-55 T 13-10-2018 Y11_p0481 6d14a702f89d95c662ab81eca7e95eca 130 PIRSF PIRSF011271 1 120 1.1E-63 T 13-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 Y11_22921 d3874e9718c492349c57b353449281cb 599 SUPERFAMILY SSF52343 444 599 7.6E-50 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Y11_22921 d3874e9718c492349c57b353449281cb 599 SUPERFAMILY SSF52218 63 211 4.39E-43 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_22921 d3874e9718c492349c57b353449281cb 599 Pfam PF00667 FAD binding domain 230 424 2.1E-27 T 13-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 Y11_22921 d3874e9718c492349c57b353449281cb 599 Gene3D G3DSA:1.20.990.10 280 384 1.3E-74 T 13-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 Y11_22921 d3874e9718c492349c57b353449281cb 599 Pfam PF00175 Oxidoreductase NAD-binding domain 457 563 2.9E-19 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Y11_22921 d3874e9718c492349c57b353449281cb 599 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 599 2.1E-271 T 13-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_22921 d3874e9718c492349c57b353449281cb 599 Gene3D G3DSA:2.40.30.10 232 439 1.3E-74 T 13-10-2018 Y11_22921 d3874e9718c492349c57b353449281cb 599 Gene3D G3DSA:3.40.50.80 445 599 6.6E-57 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Y11_22921 d3874e9718c492349c57b353449281cb 599 PIRSF PIRSF000207 1 599 1.9E-274 T 13-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_22921 d3874e9718c492349c57b353449281cb 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 494 505 1.1E-28 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Y11_22921 d3874e9718c492349c57b353449281cb 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 548 556 1.1E-28 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Y11_22921 d3874e9718c492349c57b353449281cb 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 386 393 1.1E-28 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Y11_22921 d3874e9718c492349c57b353449281cb 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 456 475 1.1E-28 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Y11_22921 d3874e9718c492349c57b353449281cb 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 481 490 1.1E-28 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Y11_22921 d3874e9718c492349c57b353449281cb 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 419 428 1.1E-28 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Y11_22921 d3874e9718c492349c57b353449281cb 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 525 541 1.1E-28 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Y11_22921 d3874e9718c492349c57b353449281cb 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 270 280 1.1E-28 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Y11_22921 d3874e9718c492349c57b353449281cb 599 Pfam PF00258 Flavodoxin 67 197 1.2E-32 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Y11_22921 d3874e9718c492349c57b353449281cb 599 SUPERFAMILY SSF63380 228 446 3.4E-64 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Y11_22921 d3874e9718c492349c57b353449281cb 599 PRINTS PR00369 Flavodoxin signature 169 188 2.5E-14 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Y11_22921 d3874e9718c492349c57b353449281cb 599 PRINTS PR00369 Flavodoxin signature 65 78 2.5E-14 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Y11_22921 d3874e9718c492349c57b353449281cb 599 PRINTS PR00369 Flavodoxin signature 113 124 2.5E-14 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Y11_22921 d3874e9718c492349c57b353449281cb 599 PRINTS PR00369 Flavodoxin signature 145 155 2.5E-14 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Y11_22921 d3874e9718c492349c57b353449281cb 599 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 599 51.752 T 13-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Y11_22921 d3874e9718c492349c57b353449281cb 599 Gene3D G3DSA:3.40.50.360 58 218 1.3E-46 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_03081 e13df43e3da68dc0cb6f1dc3cc88b22a 194 Gene3D G3DSA:3.90.1720.10 65 193 1.3E-44 T 13-10-2018 Y11_03081 e13df43e3da68dc0cb6f1dc3cc88b22a 194 Pfam PF00877 NlpC/P60 family 82 185 1.6E-31 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Y11_03081 e13df43e3da68dc0cb6f1dc3cc88b22a 194 SUPERFAMILY SSF54001 70 188 3.27E-39 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Y11_13781 9fb14ac069c77278248b1135f7af8110 392 SMART SM00612 102 156 0.0014 T 13-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Y11_13781 9fb14ac069c77278248b1135f7af8110 392 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 38 384 3.7E-148 T 13-10-2018 IPR019936 Mutatrotase, YjhT-like Y11_13781 9fb14ac069c77278248b1135f7af8110 392 Pfam PF01344 Kelch motif 91 140 8.4E-10 T 13-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Y11_13781 9fb14ac069c77278248b1135f7af8110 392 Hamap MF_01195 N-acetylneuraminate epimerase [nanM]. 17 392 45.122 T 13-10-2018 IPR019936 Mutatrotase, YjhT-like Y11_13781 9fb14ac069c77278248b1135f7af8110 392 Gene3D G3DSA:2.120.10.80 195 384 1.3E-6 T 13-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Y11_13781 9fb14ac069c77278248b1135f7af8110 392 Gene3D G3DSA:2.120.10.80 23 187 5.7E-19 T 13-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Y11_13781 9fb14ac069c77278248b1135f7af8110 392 SUPERFAMILY SSF117281 55 382 4.84E-32 T 13-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Y11_26071 d6143b4a45c0ecb9dfedecc708cf690f 239 SUPERFAMILY SSF49354 24 150 1.8E-45 T 13-10-2018 IPR008962 PapD-like superfamily Y11_26071 d6143b4a45c0ecb9dfedecc708cf690f 239 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 105 122 - T 13-10-2018 IPR018046 Pili assembly chaperone, conserved site Y11_26071 d6143b4a45c0ecb9dfedecc708cf690f 239 Gene3D G3DSA:2.60.40.10 30 150 3.7E-46 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_26071 d6143b4a45c0ecb9dfedecc708cf690f 239 Gene3D G3DSA:2.60.40.10 153 235 1.2E-18 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_26071 d6143b4a45c0ecb9dfedecc708cf690f 239 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 173 230 3.3E-14 T 13-10-2018 IPR016148 Pili assembly chaperone, C-terminal Y11_26071 d6143b4a45c0ecb9dfedecc708cf690f 239 SUPERFAMILY SSF49584 152 234 9.55E-20 T 13-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily Y11_26071 d6143b4a45c0ecb9dfedecc708cf690f 239 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 150 7.6E-47 T 13-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Y11_26071 d6143b4a45c0ecb9dfedecc708cf690f 239 PRINTS PR00969 Pili chaperone signature 29 38 3.7E-34 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_26071 d6143b4a45c0ecb9dfedecc708cf690f 239 PRINTS PR00969 Pili chaperone signature 78 99 3.7E-34 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_26071 d6143b4a45c0ecb9dfedecc708cf690f 239 PRINTS PR00969 Pili chaperone signature 106 123 3.7E-34 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_26071 d6143b4a45c0ecb9dfedecc708cf690f 239 PRINTS PR00969 Pili chaperone signature 167 182 3.7E-34 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_26071 d6143b4a45c0ecb9dfedecc708cf690f 239 PRINTS PR00969 Pili chaperone signature 132 147 3.7E-34 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_27451 d2dcfa6ba2580c011293c19ba547f987 455 Pfam PF00860 Permease family 32 415 2.9E-83 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Y11_17801 67c2d34419f8e43284dedde3a8f49df8 278 Pfam PF00005 ABC transporter 53 207 1.7E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_17801 67c2d34419f8e43284dedde3a8f49df8 278 SUPERFAMILY SSF52540 36 276 3.55E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_17801 67c2d34419f8e43284dedde3a8f49df8 278 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 255 277 5.1E-9 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Y11_17801 67c2d34419f8e43284dedde3a8f49df8 278 Gene3D G3DSA:3.40.50.300 21 276 1.8E-54 T 13-10-2018 Y11_17801 67c2d34419f8e43284dedde3a8f49df8 278 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 37 278 9.5E-110 T 13-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD Y11_31261 75d192689d1314507f205c052c907b53 234 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 14 234 3.4E-79 T 13-10-2018 IPR009331 Oligogalacturonate-specific porin Y11_31261 75d192689d1314507f205c052c907b53 234 Gene3D G3DSA:2.40.160.40 21 234 9.8E-76 T 13-10-2018 Y11_31261 75d192689d1314507f205c052c907b53 234 SUPERFAMILY SSF56935 66 234 4.88E-11 T 13-10-2018 Y11_28751 32698d03b3c78484e6e90bf1536c5b65 167 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 162 2.0E-68 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Y11_28751 32698d03b3c78484e6e90bf1536c5b65 167 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 161 33.987 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Y11_28751 32698d03b3c78484e6e90bf1536c5b65 167 Pfam PF00588 SpoU rRNA Methylase family 2 152 9.8E-31 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Y11_28751 32698d03b3c78484e6e90bf1536c5b65 167 PIRSF PIRSF029256 1 164 1.5E-68 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Y11_28751 32698d03b3c78484e6e90bf1536c5b65 167 SUPERFAMILY SSF75217 1 162 3.2E-41 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Y11_28751 32698d03b3c78484e6e90bf1536c5b65 167 Gene3D G3DSA:3.40.1280.10 1 167 7.7E-73 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Y11_11721 07eadff04f6da33711e639486a5e721f 494 SUPERFAMILY SSF55347 179 491 8.83E-113 T 13-10-2018 Y11_11721 07eadff04f6da33711e639486a5e721f 494 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 179 185 - T 13-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Y11_11721 07eadff04f6da33711e639486a5e721f 494 Gene3D G3DSA:3.30.360.10 179 479 6.4E-168 T 13-10-2018 Y11_11721 07eadff04f6da33711e639486a5e721f 494 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 12 492 91.04 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Y11_11721 07eadff04f6da33711e639486a5e721f 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 145 158 7.0E-48 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Y11_11721 07eadff04f6da33711e639486a5e721f 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 221 238 7.0E-48 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Y11_11721 07eadff04f6da33711e639486a5e721f 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 169 197 7.0E-48 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Y11_11721 07eadff04f6da33711e639486a5e721f 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 239 255 7.0E-48 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Y11_11721 07eadff04f6da33711e639486a5e721f 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 330 356 7.0E-48 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Y11_11721 07eadff04f6da33711e639486a5e721f 494 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 491 3.0E-115 T 13-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Y11_11721 07eadff04f6da33711e639486a5e721f 494 Gene3D G3DSA:3.40.50.720 15 440 6.4E-168 T 13-10-2018 Y11_11721 07eadff04f6da33711e639486a5e721f 494 PIRSF PIRSF000110 1 494 4.6E-184 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Y11_11721 07eadff04f6da33711e639486a5e721f 494 SUPERFAMILY SSF51735 7 192 4.07E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_11721 07eadff04f6da33711e639486a5e721f 494 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 12 492 6.3E-200 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Y11_11721 07eadff04f6da33711e639486a5e721f 494 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 16 189 3.4E-59 T 13-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Y11_10671 ae8cbf53e0e90d1a2264e6c23eacb352 348 Gene3D G3DSA:3.90.226.10 104 300 2.3E-42 T 13-10-2018 Y11_10671 ae8cbf53e0e90d1a2264e6c23eacb352 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 3.6E-58 T 13-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 Y11_10671 ae8cbf53e0e90d1a2264e6c23eacb352 348 Pfam PF01343 Peptidase family S49 161 304 5.1E-45 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Y11_10671 ae8cbf53e0e90d1a2264e6c23eacb352 348 SUPERFAMILY SSF52096 96 298 1.76E-30 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Y11_10671 ae8cbf53e0e90d1a2264e6c23eacb352 348 Gene3D G3DSA:3.40.1750.20 201 265 2.3E-42 T 13-10-2018 Y11_42891 4a9cd2682db321c552197153f199609f 249 SUPERFAMILY SSF48452 32 182 2.88E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_42891 4a9cd2682db321c552197153f199609f 249 Pfam PF13181 Tetratricopeptide repeat 36 66 5.9E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_42891 4a9cd2682db321c552197153f199609f 249 Gene3D G3DSA:1.25.40.10 31 247 5.0E-41 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_42891 4a9cd2682db321c552197153f199609f 249 SMART SM00028 137 170 1.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_42891 4a9cd2682db321c552197153f199609f 249 SMART SM00028 33 66 0.019 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_42891 4a9cd2682db321c552197153f199609f 249 SMART SM00028 67 100 4.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_42891 4a9cd2682db321c552197153f199609f 249 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 236 4.6E-81 T 13-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW Y11_36421 5285d022e1f8b428ffa6dbd952620342 578 Pfam PF01103 Surface antigen 354 575 1.8E-29 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Y11_36421 5285d022e1f8b428ffa6dbd952620342 578 Gene3D G3DSA:2.40.160.50 267 578 2.7E-122 T 13-10-2018 Y11_36421 5285d022e1f8b428ffa6dbd952620342 578 Pfam PF17243 POTRA domain TamA domain 1 26 100 2.2E-20 T 13-10-2018 IPR035243 TamA, POTRA domain 1 Y11_36421 5285d022e1f8b428ffa6dbd952620342 578 Gene3D G3DSA:3.10.20.310 102 189 2.9E-30 T 13-10-2018 Y11_36421 5285d022e1f8b428ffa6dbd952620342 578 Gene3D G3DSA:3.10.20.310 21 101 5.3E-31 T 13-10-2018 Y11_36421 5285d022e1f8b428ffa6dbd952620342 578 Pfam PF07244 Surface antigen variable number repeat 190 252 3.3E-7 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Y11_36421 5285d022e1f8b428ffa6dbd952620342 578 Gene3D G3DSA:3.10.20.310 190 266 2.5E-25 T 13-10-2018 Y11_00281 688d50d4908993b14d2f64baa132573b 140 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 11 123 6.0E-39 T 13-10-2018 IPR006504 Transcriptional regulator Spx/MgsR Y11_00281 688d50d4908993b14d2f64baa132573b 140 SUPERFAMILY SSF52833 11 123 3.07E-31 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_00281 688d50d4908993b14d2f64baa132573b 140 Gene3D G3DSA:3.40.30.10 10 124 2.5E-40 T 13-10-2018 Y11_00281 688d50d4908993b14d2f64baa132573b 140 Pfam PF03960 ArsC family 13 122 9.6E-14 T 13-10-2018 IPR006660 Arsenate reductase-like Y11_01051 48eb3b412261aceac000e63298036cfe 349 SUPERFAMILY SSF50331 243 340 2.3E-5 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Y11_01051 48eb3b412261aceac000e63298036cfe 349 SMART SM00382 28 213 8.0E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_01051 48eb3b412261aceac000e63298036cfe 349 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_01051 48eb3b412261aceac000e63298036cfe 349 Pfam PF00005 ABC transporter 19 163 4.0E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_01051 48eb3b412261aceac000e63298036cfe 349 SUPERFAMILY SSF52540 4 239 8.91E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_01051 48eb3b412261aceac000e63298036cfe 349 Gene3D G3DSA:3.40.50.300 2 270 5.7E-70 T 13-10-2018 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 Gene3D G3DSA:2.70.98.10 756 1047 6.3E-93 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 Hamap MF_01687 Beta-galactosidase [lacZ]. 13 1047 17.59 T 13-10-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 463 477 - T 13-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 SUPERFAMILY SSF49303 228 349 3.17E-20 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 Gene3D G3DSA:2.60.120.260 14 226 3.0E-79 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 SUPERFAMILY SSF49785 22 226 5.53E-68 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 SUPERFAMILY SSF49303 637 746 3.6E-28 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 Gene3D G3DSA:3.20.20.80 350 638 5.6E-125 T 13-10-2018 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 SUPERFAMILY SSF51445 351 638 1.77E-100 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 401 426 - T 13-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 Gene3D G3DSA:2.60.40.10 227 349 3.7E-22 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 Pfam PF00703 Glycosyl hydrolases family 2 228 349 2.4E-11 T 13-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 Pfam PF16353 Domain of unknown function(DUF4981) 655 743 3.2E-15 T 13-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 Gene3D G3DSA:2.60.40.10 641 749 3.5E-21 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 62 226 6.2E-63 T 13-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 SMART SM01038 772 1045 1.0E-124 T 13-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 Pfam PF02929 Beta galactosidase small chain 776 1042 6.3E-64 T 13-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 351 644 1.8E-114 T 13-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 PRINTS PR00132 Glycosyl hydrolase family 2 signature 547 562 5.0E-37 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 PRINTS PR00132 Glycosyl hydrolase family 2 signature 154 169 5.0E-37 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 PRINTS PR00132 Glycosyl hydrolase family 2 signature 360 374 5.0E-37 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 PRINTS PR00132 Glycosyl hydrolase family 2 signature 463 478 5.0E-37 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 PRINTS PR00132 Glycosyl hydrolase family 2 signature 391 409 5.0E-37 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Y11_14811 b7b9aaeb020f82868d0888e413024bff 1050 SUPERFAMILY SSF74650 758 1044 1.21E-95 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Y11_15061 dc12264f260590468144db135ee71853 252 Pfam PF08401 Domain of unknown function (DUF1738) 39 153 1.5E-36 T 13-10-2018 IPR013610 Domain of unknown function DUF1738 Y11_23421 b66dbab4a22a1ace27aa1b2cea260e2f 314 SUPERFAMILY SSF56601 14 314 2.46E-116 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_23421 b66dbab4a22a1ace27aa1b2cea260e2f 314 Gene3D G3DSA:3.40.710.10 11 314 4.3E-111 T 13-10-2018 Y11_23421 b66dbab4a22a1ace27aa1b2cea260e2f 314 Hamap MF_00313 Glutaminase [glsA]. 12 314 46.851 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Y11_23421 b66dbab4a22a1ace27aa1b2cea260e2f 314 Pfam PF04960 Glutaminase 30 314 1.8E-114 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Y11_23421 b66dbab4a22a1ace27aa1b2cea260e2f 314 TIGRFAM TIGR03814 Gln_ase: glutaminase A 16 314 6.7E-133 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Y11_16731 e0cdb243c47c0a134a73f6772dd0d1a7 187 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 187 2.0E-107 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Y11_16731 e0cdb243c47c0a134a73f6772dd0d1a7 187 Gene3D G3DSA:2.60.120.10 1 187 3.8E-66 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_16731 e0cdb243c47c0a134a73f6772dd0d1a7 187 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 182 5.0E-67 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Y11_16731 e0cdb243c47c0a134a73f6772dd0d1a7 187 SUPERFAMILY SSF51182 1 185 3.95E-68 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_16731 e0cdb243c47c0a134a73f6772dd0d1a7 187 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 184 7.5E-73 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Y11_42841 28bbad85dc47f716404b075c14f138dd 1678 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 303 395 5.7E-21 T 13-10-2018 Y11_42841 28bbad85dc47f716404b075c14f138dd 1678 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 774 921 2.1E-14 T 13-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 Y11_42841 28bbad85dc47f716404b075c14f138dd 1678 SUPERFAMILY SSF48239 1195 1451 5.16E-39 T 13-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Y11_42841 28bbad85dc47f716404b075c14f138dd 1678 PIRSF PIRSF038980 10 1678 0.0 T 13-10-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria Y11_42841 28bbad85dc47f716404b075c14f138dd 1678 SMART SM01360 986 1075 2.0E-18 T 13-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 Y11_42841 28bbad85dc47f716404b075c14f138dd 1678 SMART SM01359 773 921 4.6E-37 T 13-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 Y11_42841 28bbad85dc47f716404b075c14f138dd 1678 Pfam PF00207 Alpha-2-macroglobulin family 993 1072 9.6E-8 T 13-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 Y11_42841 28bbad85dc47f716404b075c14f138dd 1678 Gene3D G3DSA:1.50.10.20 1190 1455 3.0E-28 T 13-10-2018 Y11_42841 28bbad85dc47f716404b075c14f138dd 1678 Pfam PF01835 MG2 domain 402 493 2.9E-19 T 13-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 Y11_42841 28bbad85dc47f716404b075c14f138dd 1678 Gene3D G3DSA:2.60.40.1930 402 497 1.1E-6 T 13-10-2018 Y11_42841 28bbad85dc47f716404b075c14f138dd 1678 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1200 1218 8.7E-5 T 13-10-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming Y11_42931 5628407fa6b202973df3c9b3117968d9 450 Gene3D G3DSA:3.30.930.10 28 348 9.9E-119 T 13-10-2018 Y11_42931 5628407fa6b202973df3c9b3117968d9 450 SUPERFAMILY SSF52954 353 445 4.74E-23 T 13-10-2018 Y11_42931 5628407fa6b202973df3c9b3117968d9 450 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 29 447 33.401 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Y11_42931 5628407fa6b202973df3c9b3117968d9 450 SUPERFAMILY SSF55681 31 344 2.79E-106 T 13-10-2018 Y11_42931 5628407fa6b202973df3c9b3117968d9 450 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 32 437 2.9E-155 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Y11_42931 5628407fa6b202973df3c9b3117968d9 450 Pfam PF13393 Histidyl-tRNA synthetase 36 338 1.4E-44 T 13-10-2018 Y11_42931 5628407fa6b202973df3c9b3117968d9 450 Gene3D G3DSA:3.40.50.800 353 448 2.0E-24 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily Y11_42931 5628407fa6b202973df3c9b3117968d9 450 PIRSF PIRSF001549 28 447 4.9E-126 T 13-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Y11_42931 5628407fa6b202973df3c9b3117968d9 450 Pfam PF03129 Anticodon binding domain 357 444 5.5E-9 T 13-10-2018 IPR004154 Anticodon-binding Y11_04221 edacd6efe0cc4efa3c590a8b34c5fcf0 66 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 19 38 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Y11_04221 edacd6efe0cc4efa3c590a8b34c5fcf0 66 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 65 4.2E-37 T 13-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 Y11_04221 edacd6efe0cc4efa3c590a8b34c5fcf0 66 SMART SM00411 1 63 6.6E-18 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_04221 edacd6efe0cc4efa3c590a8b34c5fcf0 66 SUPERFAMILY SSF47729 2 63 1.34E-21 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Y11_04221 edacd6efe0cc4efa3c590a8b34c5fcf0 66 Gene3D G3DSA:4.10.520.10 12 66 4.4E-33 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Y11_04221 edacd6efe0cc4efa3c590a8b34c5fcf0 66 PRINTS PR01727 Prokaryotic integration host factor signature 47 61 6.6E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_04221 edacd6efe0cc4efa3c590a8b34c5fcf0 66 PRINTS PR01727 Prokaryotic integration host factor signature 13 28 6.6E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_04221 edacd6efe0cc4efa3c590a8b34c5fcf0 66 PRINTS PR01727 Prokaryotic integration host factor signature 31 44 6.6E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_04221 edacd6efe0cc4efa3c590a8b34c5fcf0 66 Pfam PF00216 Bacterial DNA-binding protein 2 63 9.1E-21 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_42711 0eea29b9d7dde07ea70b1ecd0e2dce4e 409 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 6 400 54.693 T 13-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Y11_42711 0eea29b9d7dde07ea70b1ecd0e2dce4e 409 Pfam PF00266 Aminotransferase class-V 10 373 1.6E-86 T 13-10-2018 IPR000192 Aminotransferase class V domain Y11_42711 0eea29b9d7dde07ea70b1ecd0e2dce4e 409 Gene3D G3DSA:3.90.1150.10 10 381 2.9E-167 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_42711 0eea29b9d7dde07ea70b1ecd0e2dce4e 409 SUPERFAMILY SSF53383 8 395 1.71E-114 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_42711 0eea29b9d7dde07ea70b1ecd0e2dce4e 409 Gene3D G3DSA:3.40.640.10 21 267 2.9E-167 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_42711 0eea29b9d7dde07ea70b1ecd0e2dce4e 409 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 6 409 4.5E-231 T 13-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Y11_42711 0eea29b9d7dde07ea70b1ecd0e2dce4e 409 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 202 221 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Y11_42711 0eea29b9d7dde07ea70b1ecd0e2dce4e 409 PIRSF PIRSF005572 7 389 5.6E-138 T 13-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Y11_29281 11fb1d8c4bba2aba947d9f04310e0dbf 81 SUPERFAMILY SSF47413 2 68 1.69E-26 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_29281 11fb1d8c4bba2aba947d9f04310e0dbf 81 Gene3D G3DSA:1.10.260.40 1 68 1.2E-31 T 13-10-2018 Y11_29281 11fb1d8c4bba2aba947d9f04310e0dbf 81 Pfam PF13693 Winged helix-turn-helix DNA-binding 4 75 1.5E-31 T 13-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain Y11_41531 2e839a699a55fffa010a05bd4a0c6e3b 399 SUPERFAMILY SSF54631 275 396 7.45E-14 T 13-10-2018 Y11_41531 2e839a699a55fffa010a05bd4a0c6e3b 399 Pfam PF00571 CBS domain 346 393 2.4E-6 T 13-10-2018 IPR000644 CBS domain Y11_41531 2e839a699a55fffa010a05bd4a0c6e3b 399 Gene3D G3DSA:3.40.50.300 34 287 9.2E-79 T 13-10-2018 Y11_41531 2e839a699a55fffa010a05bd4a0c6e3b 399 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_41531 2e839a699a55fffa010a05bd4a0c6e3b 399 Gene3D G3DSA:3.10.580.10 295 395 5.2E-10 T 13-10-2018 Y11_41531 2e839a699a55fffa010a05bd4a0c6e3b 399 SMART SM00382 53 242 9.4E-20 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_41531 2e839a699a55fffa010a05bd4a0c6e3b 399 Pfam PF00005 ABC transporter 44 192 1.2E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_41531 2e839a699a55fffa010a05bd4a0c6e3b 399 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 394 2.7E-176 T 13-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 Y11_41531 2e839a699a55fffa010a05bd4a0c6e3b 399 SUPERFAMILY SSF52540 43 271 2.33E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_13901 b6241bae934a7d9ecd9a8297320a4015 494 Pfam PF00474 Sodium:solute symporter family 35 437 7.7E-138 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Y11_13901 b6241bae934a7d9ecd9a8297320a4015 494 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site Y11_13901 b6241bae934a7d9ecd9a8297320a4015 494 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 1.9E-120 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Y11_13901 b6241bae934a7d9ecd9a8297320a4015 494 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 4.1E-224 T 13-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 Y11_13901 b6241bae934a7d9ecd9a8297320a4015 494 Gene3D G3DSA:1.20.1730.10 23 493 1.7E-90 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily Y11_17511 3cd53ce98489c7936fa794bf7cd186a8 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 1.7E-30 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Y11_17511 3cd53ce98489c7936fa794bf7cd186a8 218 Gene3D G3DSA:1.10.3720.10 1 216 2.1E-54 T 13-10-2018 IPR035906 MetI-like superfamily Y11_17511 3cd53ce98489c7936fa794bf7cd186a8 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 216 2.3E-22 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_17511 3cd53ce98489c7936fa794bf7cd186a8 218 SUPERFAMILY SSF161098 13 201 4.58E-44 T 13-10-2018 IPR035906 MetI-like superfamily Y11_40581 4da76b79ef27d6eacef0fc6167ec2b46 707 SUPERFAMILY SSF53706 1 582 4.19E-145 T 13-10-2018 Y11_40581 4da76b79ef27d6eacef0fc6167ec2b46 707 Gene3D G3DSA:3.40.228.10 100 546 1.9E-190 T 13-10-2018 Y11_40581 4da76b79ef27d6eacef0fc6167ec2b46 707 Gene3D G3DSA:2.40.40.20 554 707 1.1E-39 T 13-10-2018 Y11_40581 4da76b79ef27d6eacef0fc6167ec2b46 707 Gene3D G3DSA:3.40.50.740 7 472 1.9E-190 T 13-10-2018 Y11_40581 4da76b79ef27d6eacef0fc6167ec2b46 707 Pfam PF00384 Molybdopterin oxidoreductase 7 464 2.6E-60 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_40581 4da76b79ef27d6eacef0fc6167ec2b46 707 Pfam PF01568 Molydopterin dinucleotide binding domain 580 700 5.5E-25 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Y11_40581 4da76b79ef27d6eacef0fc6167ec2b46 707 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 408 425 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Y11_40581 4da76b79ef27d6eacef0fc6167ec2b46 707 Gene3D G3DSA:3.90.55.10 3 520 1.9E-190 T 13-10-2018 Y11_40581 4da76b79ef27d6eacef0fc6167ec2b46 707 SUPERFAMILY SSF50692 573 705 6.63E-33 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Y11_34391 e338974691e270683db11333679176c7 215 Gene3D G3DSA:2.60.40.10 19 142 8.1E-19 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_10011 eca987152002b6aad16cef4e8bb4fd39 228 Pfam PF02378 Phosphotransferase system, EIIC 1 53 1.8E-13 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Y11_10011 eca987152002b6aad16cef4e8bb4fd39 228 Pfam PF00367 phosphotransferase system, EIIB 150 181 1.3E-15 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Y11_10011 eca987152002b6aad16cef4e8bb4fd39 228 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 113 206 7.0E-25 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 Y11_10011 eca987152002b6aad16cef4e8bb4fd39 228 Gene3D G3DSA:3.30.1360.60 144 222 6.1E-27 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_10011 eca987152002b6aad16cef4e8bb4fd39 228 SUPERFAMILY SSF55604 149 220 1.57E-21 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_10011 eca987152002b6aad16cef4e8bb4fd39 228 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 159 176 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Y11_04121 b3072b4190c9e6c05add5d77042ddfd8 136 Pfam PF02371 Transposase IS116/IS110/IS902 family 8 84 4.0E-27 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_40231 b3072b4190c9e6c05add5d77042ddfd8 136 Pfam PF02371 Transposase IS116/IS110/IS902 family 8 84 4.0E-27 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_00421 b3072b4190c9e6c05add5d77042ddfd8 136 Pfam PF02371 Transposase IS116/IS110/IS902 family 8 84 4.0E-27 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_30191 b3072b4190c9e6c05add5d77042ddfd8 136 Pfam PF02371 Transposase IS116/IS110/IS902 family 8 84 4.0E-27 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_25721 b3072b4190c9e6c05add5d77042ddfd8 136 Pfam PF02371 Transposase IS116/IS110/IS902 family 8 84 4.0E-27 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_36551 18ee1af44a468da1c4cdd671caf5799a 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.4E-43 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36551 18ee1af44a468da1c4cdd671caf5799a 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.0E-38 T 13-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36551 18ee1af44a468da1c4cdd671caf5799a 103 SUPERFAMILY SSF141091 1 102 5.76E-37 T 13-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36551 18ee1af44a468da1c4cdd671caf5799a 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 13-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_36551 18ee1af44a468da1c4cdd671caf5799a 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.825 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_28301 a9a813dd9baf2a5ab47c97c09a832213 394 Pfam PF07690 Major Facilitator Superfamily 14 350 1.4E-38 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_28301 a9a813dd9baf2a5ab47c97c09a832213 394 Gene3D G3DSA:1.20.1720.10 9 383 1.9E-120 T 13-10-2018 Y11_28301 a9a813dd9baf2a5ab47c97c09a832213 394 SUPERFAMILY SSF103473 7 390 9.68E-58 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_12461 0151295711661b5465fb7fa860187388 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 49.995 T 13-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 Y11_12461 0151295711661b5465fb7fa860187388 245 SUPERFAMILY SSF89550 3 241 1.7E-63 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Y11_12461 0151295711661b5465fb7fa860187388 245 Gene3D G3DSA:3.20.20.140 1 245 1.3E-65 T 13-10-2018 Y11_12461 0151295711661b5465fb7fa860187388 245 Pfam PF02811 PHP domain 5 158 3.6E-7 T 13-10-2018 IPR004013 PHP domain GO:0003824 Y11_12461 0151295711661b5465fb7fa860187388 245 SMART SM00481 4 78 2.3E-15 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Y11_01271 66cb046dca3236d12b7e0d78920a3bc0 112 SUPERFAMILY SSF82057 40 111 6.41E-29 T 13-10-2018 Y11_01271 66cb046dca3236d12b7e0d78920a3bc0 112 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 111 3.6E-51 T 13-10-2018 IPR004624 PhnA protein Y11_01271 66cb046dca3236d12b7e0d78920a3bc0 112 Pfam PF03831 PhnA domain 45 111 2.6E-34 T 13-10-2018 IPR013988 PhnA protein, C-terminal Y11_01271 66cb046dca3236d12b7e0d78920a3bc0 112 Gene3D G3DSA:2.30.30.40 42 112 1.2E-35 T 13-10-2018 Y11_01271 66cb046dca3236d12b7e0d78920a3bc0 112 Pfam PF08274 PhnA Zinc-Ribbon 3 31 1.7E-11 T 13-10-2018 IPR013987 PhnA protein, N-terminal Y11_01271 66cb046dca3236d12b7e0d78920a3bc0 112 SUPERFAMILY SSF57783 2 33 5.44E-12 T 13-10-2018 Y11_01271 66cb046dca3236d12b7e0d78920a3bc0 112 Gene3D G3DSA:2.20.25.10 1 41 7.5E-14 T 13-10-2018 Y11_05801 b626214542dd2d0507ab79549dbb2eae 489 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 333 481 3.0E-25 T 13-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal Y11_05801 b626214542dd2d0507ab79549dbb2eae 489 SUPERFAMILY SSF75005 20 324 8.48E-105 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Y11_05801 b626214542dd2d0507ab79549dbb2eae 489 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 20 457 1.2E-140 T 13-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 Y11_05801 b626214542dd2d0507ab79549dbb2eae 489 SUPERFAMILY SSF49899 331 483 4.99E-30 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Y11_05801 b626214542dd2d0507ab79549dbb2eae 489 SMART SM00640 28 447 2.0E-142 T 13-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 Y11_05801 b626214542dd2d0507ab79549dbb2eae 489 Gene3D G3DSA:2.60.120.560 344 483 1.0E-30 T 13-10-2018 Y11_05801 b626214542dd2d0507ab79549dbb2eae 489 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 28 326 4.3E-97 T 13-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal Y11_05801 b626214542dd2d0507ab79549dbb2eae 489 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 28 41 - T 13-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 Y11_05801 b626214542dd2d0507ab79549dbb2eae 489 Gene3D G3DSA:2.115.10.20 2 343 8.5E-123 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Y11_10121 0d101081d9fc5009808dba8ae06dda06 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 2.1E-46 T 13-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 Y11_10121 0d101081d9fc5009808dba8ae06dda06 500 SUPERFAMILY SSF50443 329 498 1.6E-71 T 13-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal Y11_10121 0d101081d9fc5009808dba8ae06dda06 500 Gene3D G3DSA:3.40.50.10940 1 175 7.0E-89 T 13-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 Y11_10121 0d101081d9fc5009808dba8ae06dda06 500 Pfam PF02610 L-arabinose isomerase 5 359 3.9E-178 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 Y11_10121 0d101081d9fc5009808dba8ae06dda06 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 304 4.0E-166 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 Y11_10121 0d101081d9fc5009808dba8ae06dda06 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 477 64.717 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 Y11_10121 0d101081d9fc5009808dba8ae06dda06 500 SUPERFAMILY SSF53743 1 326 3.66E-124 T 13-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 Y11_10121 0d101081d9fc5009808dba8ae06dda06 500 PIRSF PIRSF001478 1 500 6.2E-259 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 Y11_39411 4f80beb85780feb919c5ec63ade886df 264 PIRSF PIRSF001356 1 263 9.4E-158 T 13-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Y11_39411 4f80beb85780feb919c5ec63ade886df 264 SUPERFAMILY SSF56276 43 173 4.32E-23 T 13-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 Y11_39411 4f80beb85780feb919c5ec63ade886df 264 Gene3D G3DSA:3.60.90.10 95 185 5.8E-6 T 13-10-2018 Y11_39411 4f80beb85780feb919c5ec63ade886df 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 178.362 T 13-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Y11_39411 4f80beb85780feb919c5ec63ade886df 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 6.8E-149 T 13-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Y11_39411 4f80beb85780feb919c5ec63ade886df 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 1.6E-29 T 13-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Y11_33991 16495d976ee28072b725f1d3d372d3de 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 316 2.1E-107 T 13-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 Y11_33991 16495d976ee28072b725f1d3d372d3de 316 Pfam PF01544 CorA-like Mg2+ transporter protein 27 312 4.7E-54 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Y11_33991 16495d976ee28072b725f1d3d372d3de 316 SUPERFAMILY SSF144083 251 314 9.29E-21 T 13-10-2018 Y11_33991 16495d976ee28072b725f1d3d372d3de 316 Gene3D G3DSA:1.20.58.340 240 316 4.1E-26 T 13-10-2018 Y11_33991 16495d976ee28072b725f1d3d372d3de 316 SUPERFAMILY SSF143865 1 255 3.92E-37 T 13-10-2018 Y11_40851 596b812dd775b3e7f857199b1f70c3aa 73 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 7.8E-26 T 13-10-2018 IPR010305 Protein of unknown function DUF903 Y11_40851 596b812dd775b3e7f857199b1f70c3aa 73 SUPERFAMILY SSF50182 21 71 8.18E-20 T 13-10-2018 IPR010920 LSM domain superfamily Y11_40851 596b812dd775b3e7f857199b1f70c3aa 73 Gene3D G3DSA:2.30.30.100 19 72 1.0E-28 T 13-10-2018 Y11_38371 384d96cf35b80b8b228e3632bc4bb157 194 Pfam PF00994 Probable molybdopterin binding domain 8 147 3.7E-28 T 13-10-2018 IPR001453 MoaB/Mog domain Y11_38371 384d96cf35b80b8b228e3632bc4bb157 194 SMART SM00852 7 153 4.3E-22 T 13-10-2018 IPR001453 MoaB/Mog domain Y11_38371 384d96cf35b80b8b228e3632bc4bb157 194 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 146 1.9E-39 T 13-10-2018 IPR001453 MoaB/Mog domain Y11_38371 384d96cf35b80b8b228e3632bc4bb157 194 SUPERFAMILY SSF53218 3 187 2.49E-46 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Y11_38371 384d96cf35b80b8b228e3632bc4bb157 194 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 13-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Y11_38371 384d96cf35b80b8b228e3632bc4bb157 194 Gene3D G3DSA:3.40.980.10 2 194 3.0E-62 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Y11_14541 3dc0f69108bd0eecc4d1b91cb793026d 547 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 267 277 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Y11_14541 3dc0f69108bd0eecc4d1b91cb793026d 547 SUPERFAMILY SSF52743 208 537 8.51E-64 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Y11_14541 3dc0f69108bd0eecc4d1b91cb793026d 547 Pfam PF00082 Subtilase family 219 524 4.2E-34 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Y11_14541 3dc0f69108bd0eecc4d1b91cb793026d 547 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 467 477 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Y11_14541 3dc0f69108bd0eecc4d1b91cb793026d 547 Gene3D G3DSA:3.40.50.200 180 539 1.7E-76 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Y11_14541 3dc0f69108bd0eecc4d1b91cb793026d 547 PRINTS PR00723 Subtilisin serine protease family (S8) signature 263 276 5.6E-15 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related Y11_14541 3dc0f69108bd0eecc4d1b91cb793026d 547 PRINTS PR00723 Subtilisin serine protease family (S8) signature 466 482 5.6E-15 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related Y11_14541 3dc0f69108bd0eecc4d1b91cb793026d 547 PRINTS PR00723 Subtilisin serine protease family (S8) signature 219 238 5.6E-15 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related Y11_14541 3dc0f69108bd0eecc4d1b91cb793026d 547 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 224 235 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Y11_27081 8dbab59216d405f162d1a04bb20c9b73 286 SUPERFAMILY SSF56317 2 267 2.22E-71 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Y11_27081 8dbab59216d405f162d1a04bb20c9b73 286 Gene3D G3DSA:3.60.110.10 1 272 2.0E-84 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Y11_27081 8dbab59216d405f162d1a04bb20c9b73 286 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 8.8E-48 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Y11_27081 8dbab59216d405f162d1a04bb20c9b73 286 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 13-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site Y11_25551 73c3a051a3c88f825dc6eea3ce7e2e81 351 Pfam PF00589 Phage integrase family 173 320 7.9E-25 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Y11_25551 73c3a051a3c88f825dc6eea3ce7e2e81 351 SUPERFAMILY SSF56349 60 329 6.83E-46 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Y11_25551 73c3a051a3c88f825dc6eea3ce7e2e81 351 Gene3D G3DSA:1.10.443.10 168 338 1.5E-46 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Y11_27601 1e77e30536fab1ebd4ff9a1590f64475 170 Gene3D G3DSA:3.30.1490.190 91 153 1.2E-15 T 13-10-2018 Y11_27601 1e77e30536fab1ebd4ff9a1590f64475 170 Gene3D G3DSA:1.10.10.10 2 90 3.6E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_27601 1e77e30536fab1ebd4ff9a1590f64475 170 Pfam PF01475 Ferric uptake regulator family 21 139 9.2E-14 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Y11_27601 1e77e30536fab1ebd4ff9a1590f64475 170 SUPERFAMILY SSF46785 13 145 3.15E-33 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_16521 e29fa0cb31d0a9a4a23c1f626b545ee2 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 1.9E-47 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Y11_16521 e29fa0cb31d0a9a4a23c1f626b545ee2 299 Pfam PF08029 HisG, C-terminal domain 223 296 3.5E-24 T 13-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Y11_16521 e29fa0cb31d0a9a4a23c1f626b545ee2 299 Gene3D G3DSA:3.40.190.10 7 221 6.9E-74 T 13-10-2018 Y11_16521 e29fa0cb31d0a9a4a23c1f626b545ee2 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 298 8.0E-33 T 13-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Y11_16521 e29fa0cb31d0a9a4a23c1f626b545ee2 299 SUPERFAMILY SSF53850 6 224 7.42E-70 T 13-10-2018 Y11_16521 e29fa0cb31d0a9a4a23c1f626b545ee2 299 Gene3D G3DSA:3.30.70.120 226 299 6.9E-35 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Y11_16521 e29fa0cb31d0a9a4a23c1f626b545ee2 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 8.4E-56 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Y11_16521 e29fa0cb31d0a9a4a23c1f626b545ee2 299 SUPERFAMILY SSF54913 226 298 1.56E-21 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Y11_16521 e29fa0cb31d0a9a4a23c1f626b545ee2 299 Gene3D G3DSA:3.40.190.10 103 192 6.9E-74 T 13-10-2018 Y11_16521 e29fa0cb31d0a9a4a23c1f626b545ee2 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.266 T 13-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Y11_16521 e29fa0cb31d0a9a4a23c1f626b545ee2 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 13-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 Y11_02211 b9dbf144671beb75e744687807ec5533 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 13-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02211 b9dbf144671beb75e744687807ec5533 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 13-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02211 b9dbf144671beb75e744687807ec5533 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 23.92 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02211 b9dbf144671beb75e744687807ec5533 325 Pfam PF00146 NADH dehydrogenase 17 316 2.5E-120 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_43011 8c53929331e833d7f88edce5a31fec08 458 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.41 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Y11_43011 8c53929331e833d7f88edce5a31fec08 458 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 359 5.3E-136 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Y11_43011 8c53929331e833d7f88edce5a31fec08 458 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 1.1E-32 T 13-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 Y11_43011 8c53929331e833d7f88edce5a31fec08 458 Pfam PF02601 Exonuclease VII, large subunit 126 440 1.9E-101 T 13-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Y11_20841 48142de52fe1f50d526e84a0bf00ae66 322 SUPERFAMILY SSF82866 80 302 3.01E-42 T 13-10-2018 Y11_20841 48142de52fe1f50d526e84a0bf00ae66 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 302 28.554 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Y11_20841 48142de52fe1f50d526e84a0bf00ae66 322 PRINTS PR01755 Bacterial translocase SecF protein signature 159 173 1.8E-33 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Y11_20841 48142de52fe1f50d526e84a0bf00ae66 322 PRINTS PR01755 Bacterial translocase SecF protein signature 207 225 1.8E-33 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Y11_20841 48142de52fe1f50d526e84a0bf00ae66 322 PRINTS PR01755 Bacterial translocase SecF protein signature 239 254 1.8E-33 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Y11_20841 48142de52fe1f50d526e84a0bf00ae66 322 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.8E-33 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Y11_20841 48142de52fe1f50d526e84a0bf00ae66 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 291 3.1E-88 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Y11_20841 48142de52fe1f50d526e84a0bf00ae66 322 Pfam PF07549 SecD/SecF GG Motif 40 66 2.3E-11 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Y11_20841 48142de52fe1f50d526e84a0bf00ae66 322 Pfam PF02355 Protein export membrane protein 117 300 2.4E-71 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Y11_20841 48142de52fe1f50d526e84a0bf00ae66 322 Gene3D G3DSA:1.20.1640.10 110 313 1.4E-16 T 13-10-2018 Y11_20841 48142de52fe1f50d526e84a0bf00ae66 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 126 288 1.5E-55 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Y11_21431 7b3cbfb967f22c83fdba01cc171ad6d4 209 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.98 T 13-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 Y11_21431 7b3cbfb967f22c83fdba01cc171ad6d4 209 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 206 5.2E-106 T 13-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 Y11_21431 7b3cbfb967f22c83fdba01cc171ad6d4 209 PIRSF PIRSF006102 3 209 6.9E-72 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Y11_21431 7b3cbfb967f22c83fdba01cc171ad6d4 209 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 6.5E-63 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Y11_43161 c74478a4b13b9e52301160f6cb16083e 181 PIRSF PIRSF009103 17 181 1.1E-53 T 13-10-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 Y11_43161 c74478a4b13b9e52301160f6cb16083e 181 SUPERFAMILY SSF89872 54 181 7.98E-44 T 13-10-2018 IPR036501 Inhibitor of vertebrate lysozyme superfamily Y11_43161 c74478a4b13b9e52301160f6cb16083e 181 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 61 179 4.1E-47 T 13-10-2018 Y11_43161 c74478a4b13b9e52301160f6cb16083e 181 Gene3D G3DSA:3.40.1420.10 51 181 1.0E-41 T 13-10-2018 IPR036501 Inhibitor of vertebrate lysozyme superfamily Y11_02511 6ce09cdc1412039150a859a428aea7b6 180 Pfam PF07437 YfaZ precursor 1 180 2.0E-85 T 13-10-2018 IPR009998 YfaZ Y11_02511 6ce09cdc1412039150a859a428aea7b6 180 SUPERFAMILY SSF56925 45 179 4.87E-11 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Y11_02511 6ce09cdc1412039150a859a428aea7b6 180 Gene3D G3DSA:2.40.160.10 9 129 2.5E-5 T 13-10-2018 IPR023614 Porin domain superfamily Y11_31531 8472dd4983073c88da957f20bcd054ad 481 SUPERFAMILY SSF51703 1 481 7.06E-199 T 13-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Y11_31531 8472dd4983073c88da957f20bcd054ad 481 Gene3D G3DSA:3.90.970.10 417 481 2.6E-27 T 13-10-2018 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily GO:0016866|GO:0019670|GO:0031419 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Y11_31531 8472dd4983073c88da957f20bcd054ad 481 PIRSF PIRSF001495 1 481 2.3E-229 T 13-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Y11_31531 8472dd4983073c88da957f20bcd054ad 481 TIGRFAM TIGR01503 MthylAspMut_E: methylaspartate mutase, E subunit 3 481 2.2E-240 T 13-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Y11_31531 8472dd4983073c88da957f20bcd054ad 481 Hamap MF_01923 Glutamate mutase epsilon subunit [glmE]. 2 481 53.969 T 13-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Y11_31531 8472dd4983073c88da957f20bcd054ad 481 Gene3D G3DSA:3.20.20.240 1 416 1.1E-171 T 13-10-2018 Y11_31531 8472dd4983073c88da957f20bcd054ad 481 Pfam PF06368 Methylaspartate mutase E chain (MutE) 43 481 4.0E-211 T 13-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Y11_40931 5f5a26fc2ec65ccb59ade46237e0a276 281 TIGRFAM TIGR03138 QueF: queuine synthase 10 281 8.6E-128 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Y11_40931 5f5a26fc2ec65ccb59ade46237e0a276 281 Pfam PF14489 QueF-like protein 195 269 1.1E-27 T 13-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Y11_40931 5f5a26fc2ec65ccb59ade46237e0a276 281 PIRSF PIRSF004750 6 281 2.8E-125 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Y11_40931 5f5a26fc2ec65ccb59ade46237e0a276 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 1.2E-48 T 13-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Y11_40931 5f5a26fc2ec65ccb59ade46237e0a276 281 SUPERFAMILY SSF55620 186 266 2.3E-9 T 13-10-2018 Y11_40931 5f5a26fc2ec65ccb59ade46237e0a276 281 Gene3D G3DSA:3.30.1130.10 21 139 2.5E-44 T 13-10-2018 Y11_40931 5f5a26fc2ec65ccb59ade46237e0a276 281 Gene3D G3DSA:3.30.1130.10 144 281 1.1E-59 T 13-10-2018 Y11_40931 5f5a26fc2ec65ccb59ade46237e0a276 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 166.395 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Y11_37651 fe272d5cf837ec74fa41a8128c97cf98 385 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 111 351 8.5E-43 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Y11_37651 fe272d5cf837ec74fa41a8128c97cf98 385 Gene3D G3DSA:3.40.50.2000 31 198 1.5E-35 T 13-10-2018 Y11_37651 fe272d5cf837ec74fa41a8128c97cf98 385 Gene3D G3DSA:3.40.50.2000 203 382 3.3E-40 T 13-10-2018 Y11_37651 fe272d5cf837ec74fa41a8128c97cf98 385 SUPERFAMILY SSF53756 37 380 3.92E-77 T 13-10-2018 Y11_37651 fe272d5cf837ec74fa41a8128c97cf98 385 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 38 378 3.0E-114 T 13-10-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative Y11_01061 fb698feba6e0e6640ac61e4e790e6091 518 Gene3D G3DSA:1.10.3720.10 18 255 4.0E-40 T 13-10-2018 IPR035906 MetI-like superfamily Y11_01061 fb698feba6e0e6640ac61e4e790e6091 518 SUPERFAMILY SSF161098 269 509 6.07E-35 T 13-10-2018 IPR035906 MetI-like superfamily Y11_01061 fb698feba6e0e6640ac61e4e790e6091 518 SUPERFAMILY SSF161098 18 244 3.49E-36 T 13-10-2018 IPR035906 MetI-like superfamily Y11_01061 fb698feba6e0e6640ac61e4e790e6091 518 Gene3D G3DSA:1.10.3720.10 265 516 4.8E-28 T 13-10-2018 IPR035906 MetI-like superfamily Y11_01061 fb698feba6e0e6640ac61e4e790e6091 518 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 243 7.7E-8 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_01061 fb698feba6e0e6640ac61e4e790e6091 518 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 335 514 6.5E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_11281 f5665e72008cdbcf3c5d0601573b34dc 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 3 129 36.29 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Y11_11281 f5665e72008cdbcf3c5d0601573b34dc 137 Pfam PF01641 SelR domain 12 127 1.8E-51 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Y11_11281 f5665e72008cdbcf3c5d0601573b34dc 137 Gene3D G3DSA:2.170.150.20 4 136 1.7E-58 T 13-10-2018 Y11_11281 f5665e72008cdbcf3c5d0601573b34dc 137 SUPERFAMILY SSF51316 6 132 2.72E-56 T 13-10-2018 IPR011057 Mss4-like superfamily Y11_11281 f5665e72008cdbcf3c5d0601573b34dc 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 8 135 3.6E-58 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Y11_p0761 4faaceb3a895d5d82ab0fb2702fe3477 515 TIGRFAM TIGR02514 type_III_yscP: type III secretion system needle length determinant 391 515 3.1E-42 T 13-10-2018 IPR013354 Type III secretion system needle length determinant, C-terminal domain GO:0009405 Y11_p0761 4faaceb3a895d5d82ab0fb2702fe3477 515 Pfam PF02120 Flagellar hook-length control protein FliK 428 499 2.8E-8 T 13-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Y11_27361 05d12f781e72321ad114af568375add0 512 Pfam PF10142 PhoPQ-activated pathogenicity-related protein 40 414 1.7E-131 T 13-10-2018 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type Y11_27361 05d12f781e72321ad114af568375add0 512 Gene3D G3DSA:3.40.50.1820 94 367 8.3E-18 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_27361 05d12f781e72321ad114af568375add0 512 SUPERFAMILY SSF53474 195 352 1.93E-8 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_27361 05d12f781e72321ad114af568375add0 512 PIRSF PIRSF014728 3 491 2.1E-191 T 13-10-2018 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type Y11_26651 d2deac71df5badfe1a5ba90d231c0017 471 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 460 2.7E-211 T 13-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 Y11_26651 d2deac71df5badfe1a5ba90d231c0017 471 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Y11_26651 d2deac71df5badfe1a5ba90d231c0017 471 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 7.1E-16 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 Y11_26651 d2deac71df5badfe1a5ba90d231c0017 471 Pfam PF00367 phosphotransferase system, EIIB 11 42 9.8E-13 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Y11_26651 d2deac71df5badfe1a5ba90d231c0017 471 Gene3D G3DSA:3.30.1360.60 2 78 5.6E-22 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_26651 d2deac71df5badfe1a5ba90d231c0017 471 Pfam PF02378 Phosphotransferase system, EIIC 112 404 1.6E-32 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Y11_26651 d2deac71df5badfe1a5ba90d231c0017 471 SUPERFAMILY SSF55604 10 81 4.97E-19 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_22641 f9136a6a959c4de514eefc7ae45c1068 284 PRINTS PR00969 Pili chaperone signature 161 176 2.1E-30 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_22641 f9136a6a959c4de514eefc7ae45c1068 284 PRINTS PR00969 Pili chaperone signature 200 215 2.1E-30 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_22641 f9136a6a959c4de514eefc7ae45c1068 284 PRINTS PR00969 Pili chaperone signature 138 155 2.1E-30 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_22641 f9136a6a959c4de514eefc7ae45c1068 284 PRINTS PR00969 Pili chaperone signature 62 71 2.1E-30 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_22641 f9136a6a959c4de514eefc7ae45c1068 284 PRINTS PR00969 Pili chaperone signature 108 129 2.1E-30 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_22641 f9136a6a959c4de514eefc7ae45c1068 284 Gene3D G3DSA:2.60.40.10 61 180 1.8E-38 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_22641 f9136a6a959c4de514eefc7ae45c1068 284 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 205 266 1.3E-15 T 13-10-2018 IPR016148 Pili assembly chaperone, C-terminal Y11_22641 f9136a6a959c4de514eefc7ae45c1068 284 SUPERFAMILY SSF49354 57 179 4.45E-37 T 13-10-2018 IPR008962 PapD-like superfamily Y11_22641 f9136a6a959c4de514eefc7ae45c1068 284 SUPERFAMILY SSF49584 189 278 9.68E-24 T 13-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily Y11_22641 f9136a6a959c4de514eefc7ae45c1068 284 Gene3D G3DSA:2.60.40.10 185 278 8.5E-22 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_22641 f9136a6a959c4de514eefc7ae45c1068 284 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 62 179 2.5E-35 T 13-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Y11_22641 f9136a6a959c4de514eefc7ae45c1068 284 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 137 154 - T 13-10-2018 IPR018046 Pili assembly chaperone, conserved site Y11_20371 6c8a0b97241d9de77daaa3d3983b0a70 287 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 13 283 3.3E-102 T 13-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 Y11_20371 6c8a0b97241d9de77daaa3d3983b0a70 287 Pfam PF13622 Thioesterase-like superfamily 33 282 7.4E-60 T 13-10-2018 Y11_20371 6c8a0b97241d9de77daaa3d3983b0a70 287 SUPERFAMILY SSF54637 6 114 2.28E-41 T 13-10-2018 IPR029069 HotDog domain superfamily Y11_20371 6c8a0b97241d9de77daaa3d3983b0a70 287 SUPERFAMILY SSF54637 116 283 8.23E-62 T 13-10-2018 IPR029069 HotDog domain superfamily Y11_20371 6c8a0b97241d9de77daaa3d3983b0a70 287 Gene3D G3DSA:3.10.129.90 1 287 1.4E-115 T 13-10-2018 Y11_35481 539da730d629eecb9ec368a246014ad7 131 Pfam PF01311 Bacterial export proteins, family 1 1 107 2.9E-24 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Y11_35481 539da730d629eecb9ec368a246014ad7 131 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 68 87 7.3E-13 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Y11_35481 539da730d629eecb9ec368a246014ad7 131 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 46 68 7.3E-13 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Y11_02601 8db8a4689aa378f7f9a130052d2300bb 101 Gene3D G3DSA:3.10.20.30 10 101 9.4E-19 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Y11_02601 8db8a4689aa378f7f9a130052d2300bb 101 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 54 62 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Y11_02601 8db8a4689aa378f7f9a130052d2300bb 101 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 25 93 9.4E-10 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Y11_02601 8db8a4689aa378f7f9a130052d2300bb 101 SUPERFAMILY SSF54292 19 101 1.01E-19 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Y11_20251 7db8c1721dd6445259ea2c66eb80bc2a 86 Pfam PF01197 Ribosomal protein L31 1 78 1.5E-24 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_20251 7db8c1721dd6445259ea2c66eb80bc2a 86 Gene3D G3DSA:2.30.170.50 1 83 1.1E-21 T 13-10-2018 Y11_20251 7db8c1721dd6445259ea2c66eb80bc2a 86 PRINTS PR01249 Ribosomal protein L31 signature 59 77 2.4E-14 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_20251 7db8c1721dd6445259ea2c66eb80bc2a 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.4E-14 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_20251 7db8c1721dd6445259ea2c66eb80bc2a 86 PRINTS PR01249 Ribosomal protein L31 signature 44 59 2.4E-14 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_20251 7db8c1721dd6445259ea2c66eb80bc2a 86 SUPERFAMILY SSF143800 1 80 3.88E-22 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_20251 7db8c1721dd6445259ea2c66eb80bc2a 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 26.024 T 13-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_20251 7db8c1721dd6445259ea2c66eb80bc2a 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 2.5E-16 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_04531 69c1907a4b389a3879afb3f665b5f615 637 SMART SM00382 28 230 4.3E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_04531 69c1907a4b389a3879afb3f665b5f615 637 SMART SM00382 344 514 1.5E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_04531 69c1907a4b389a3879afb3f665b5f615 637 Gene3D G3DSA:3.40.50.300 11 279 4.4E-66 T 13-10-2018 Y11_04531 69c1907a4b389a3879afb3f665b5f615 637 Pfam PF00005 ABC transporter 19 185 9.1E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_04531 69c1907a4b389a3879afb3f665b5f615 637 Pfam PF12848 ABC transporter 224 298 2.0E-9 T 13-10-2018 IPR032781 ABC-transporter extension domain Y11_04531 69c1907a4b389a3879afb3f665b5f615 637 Gene3D G3DSA:3.40.50.300 283 550 5.5E-64 T 13-10-2018 Y11_04531 69c1907a4b389a3879afb3f665b5f615 637 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_04531 69c1907a4b389a3879afb3f665b5f615 637 SUPERFAMILY SSF52540 4 244 6.55E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_04531 69c1907a4b389a3879afb3f665b5f615 637 SUPERFAMILY SSF52540 310 501 1.0E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_04531 69c1907a4b389a3879afb3f665b5f615 637 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_04531 69c1907a4b389a3879afb3f665b5f615 637 Pfam PF00005 ABC transporter 336 469 2.4E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_04531 69c1907a4b389a3879afb3f665b5f615 637 Pfam PF16326 ABC transporter C-terminal domain 564 632 4.9E-20 T 13-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 Y11_04531 69c1907a4b389a3879afb3f665b5f615 637 Gene3D G3DSA:1.10.287.380 555 637 1.4E-28 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Y11_34831 3f7f4d449b70b7161cd7b2fda5a5e052 319 Pfam PF08279 HTH domain 15 58 7.1E-10 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 Y11_34831 3f7f4d449b70b7161cd7b2fda5a5e052 319 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 73 8.3E-24 T 13-10-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 Y11_34831 3f7f4d449b70b7161cd7b2fda5a5e052 319 SUPERFAMILY SSF46785 7 60 3.49E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_34831 3f7f4d449b70b7161cd7b2fda5a5e052 319 SUPERFAMILY SSF55681 72 268 4.62E-59 T 13-10-2018 Y11_34831 3f7f4d449b70b7161cd7b2fda5a5e052 319 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 4.6E-25 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Y11_34831 3f7f4d449b70b7161cd7b2fda5a5e052 319 Gene3D G3DSA:3.30.930.10 65 270 1.1E-74 T 13-10-2018 Y11_34831 3f7f4d449b70b7161cd7b2fda5a5e052 319 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 1.6E-77 T 13-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Y11_34831 3f7f4d449b70b7161cd7b2fda5a5e052 319 SUPERFAMILY SSF50037 271 317 1.19E-11 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal Y11_34831 3f7f4d449b70b7161cd7b2fda5a5e052 319 Gene3D G3DSA:2.30.30.100 271 313 6.9E-23 T 13-10-2018 Y11_34831 3f7f4d449b70b7161cd7b2fda5a5e052 319 Pfam PF02237 Biotin protein ligase C terminal domain 272 317 2.5E-12 T 13-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Y11_34831 3f7f4d449b70b7161cd7b2fda5a5e052 319 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.654 T 13-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 Y11_34831 3f7f4d449b70b7161cd7b2fda5a5e052 319 Gene3D G3DSA:1.10.10.10 1 64 5.8E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_09391 032bf16dff259b616ed81082bc6cd7b8 345 SMART SM00354 22 92 2.0E-16 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_09391 032bf16dff259b616ed81082bc6cd7b8 345 SUPERFAMILY SSF53822 80 339 1.32E-52 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_09391 032bf16dff259b616ed81082bc6cd7b8 345 Gene3D G3DSA:3.40.50.2300 174 345 1.4E-42 T 13-10-2018 Y11_09391 032bf16dff259b616ed81082bc6cd7b8 345 Gene3D G3DSA:1.10.260.40 13 78 2.6E-19 T 13-10-2018 Y11_09391 032bf16dff259b616ed81082bc6cd7b8 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 26 69 4.6E-14 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_09391 032bf16dff259b616ed81082bc6cd7b8 345 SUPERFAMILY SSF47413 22 80 5.25E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_09391 032bf16dff259b616ed81082bc6cd7b8 345 Pfam PF13377 Periplasmic binding protein-like domain 188 344 5.9E-26 T 13-10-2018 Y11_09391 032bf16dff259b616ed81082bc6cd7b8 345 Gene3D G3DSA:3.40.50.2300 79 170 6.0E-11 T 13-10-2018 Y11_25641 2687925f521aca9ffa1189a89c4ddc48 518 Gene3D G3DSA:1.20.1740.10 16 476 4.3E-33 T 13-10-2018 Y11_25641 2687925f521aca9ffa1189a89c4ddc48 518 TIGRFAM TIGR03813 put_Glu_GABA_T: putative glutamate/gamma-aminobutyrate antiporter 16 489 2.3E-271 T 13-10-2018 IPR022520 Putative glutamate/gamma-aminobutyrate antiporter Y11_25641 2687925f521aca9ffa1189a89c4ddc48 518 Pfam PF13520 Amino acid permease 21 456 4.7E-61 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_25641 2687925f521aca9ffa1189a89c4ddc48 518 PIRSF PIRSF006060 2 493 7.4E-55 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_12961 4f14be548746e654cb3c1fb77d404ccc 86 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 84 1.8E-24 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ Y11_12961 4f14be548746e654cb3c1fb77d404ccc 86 Gene3D G3DSA:1.10.1220.10 4 85 2.4E-14 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Y11_12961 4f14be548746e654cb3c1fb77d404ccc 86 Pfam PF04221 RelB antitoxin 4 83 2.9E-29 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ Y11_12961 4f14be548746e654cb3c1fb77d404ccc 86 PIRSF PIRSF003108 1 86 1.1E-33 T 13-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 Y11_40661 6b8ab2642855a6f4bdc4ce78f297402b 175 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Y11_40661 6b8ab2642855a6f4bdc4ce78f297402b 175 SUPERFAMILY SSF55811 5 158 8.67E-33 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Y11_40661 6b8ab2642855a6f4bdc4ce78f297402b 175 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 38.171 T 13-10-2018 IPR022927 RNA pyrophosphohydrolase RppH Y11_40661 6b8ab2642855a6f4bdc4ce78f297402b 175 Gene3D G3DSA:3.90.79.10 1 160 6.0E-53 T 13-10-2018 Y11_40661 6b8ab2642855a6f4bdc4ce78f297402b 175 Pfam PF00293 NUDIX domain 7 146 1.3E-28 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Y11_40661 6b8ab2642855a6f4bdc4ce78f297402b 175 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.2E-8 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Y11_40661 6b8ab2642855a6f4bdc4ce78f297402b 175 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.2E-8 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Y11_10471 22a1787f21dfbc84383fdc47f70463d9 90 Pfam PF02371 Transposase IS116/IS110/IS902 family 2 38 3.6E-9 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_18361 a2d2d4c2f849595dfd9a0e21e147be78 647 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 65 75 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Y11_18361 a2d2d4c2f849595dfd9a0e21e147be78 647 Pfam PF00082 Subtilase family 28 265 8.6E-26 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Y11_18361 a2d2d4c2f849595dfd9a0e21e147be78 647 Gene3D G3DSA:3.40.50.200 12 304 6.9E-58 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Y11_18361 a2d2d4c2f849595dfd9a0e21e147be78 647 SUPERFAMILY SSF52743 16 268 3.8E-50 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Y11_18361 a2d2d4c2f849595dfd9a0e21e147be78 647 TIGRFAM TIGR03895 protease_PatA: cyanobactin maturation protease, PatA/PatG family 65 646 1.2E-141 T 13-10-2018 IPR023830 Peptidase S8A, PatG Y11_18361 a2d2d4c2f849595dfd9a0e21e147be78 647 PRINTS PR00723 Subtilisin serine protease family (S8) signature 28 47 5.2E-9 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related Y11_18361 a2d2d4c2f849595dfd9a0e21e147be78 647 PRINTS PR00723 Subtilisin serine protease family (S8) signature 61 74 5.2E-9 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related Y11_18361 a2d2d4c2f849595dfd9a0e21e147be78 647 PRINTS PR00723 Subtilisin serine protease family (S8) signature 222 238 5.2E-9 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related Y11_p0751 ce0080b6965ac895defc843548c631df 307 SUPERFAMILY SSF101801 230 301 8.37E-18 T 13-10-2018 IPR036429 SpoA-like superfamily Y11_p0751 ce0080b6965ac895defc843548c631df 307 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 232 301 1.3E-16 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) Y11_p0751 ce0080b6965ac895defc843548c631df 307 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 39 301 2.3E-65 T 13-10-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 Y11_p0751 ce0080b6965ac895defc843548c631df 307 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 278 295 1.2E-14 T 13-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 Y11_p0751 ce0080b6965ac895defc843548c631df 307 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 173 183 1.2E-14 T 13-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 Y11_p0751 ce0080b6965ac895defc843548c631df 307 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 234 246 1.2E-14 T 13-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 Y11_p0751 ce0080b6965ac895defc843548c631df 307 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 119 132 1.2E-14 T 13-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 Y11_p0751 ce0080b6965ac895defc843548c631df 307 Gene3D G3DSA:2.30.330.10 218 307 2.4E-34 T 13-10-2018 IPR036429 SpoA-like superfamily Y11_24971 e945de6050608e6731256e2a78a7cf15 397 Pfam PF13520 Amino acid permease 3 381 2.1E-28 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_24971 e945de6050608e6731256e2a78a7cf15 397 PIRSF PIRSF006060 3 394 2.0E-47 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_24971 e945de6050608e6731256e2a78a7cf15 397 Gene3D G3DSA:1.20.1740.10 3 395 1.3E-46 T 13-10-2018 Y11_31521 ca96561909da56598ac3e10e690e6900 414 Gene3D G3DSA:3.30.390.10 1 164 1.2E-71 T 13-10-2018 IPR029017 Enolase-like, N-terminal Y11_31521 ca96561909da56598ac3e10e690e6900 414 TIGRFAM TIGR01502 B_methylAsp_ase: methylaspartate ammonia-lyase 2 411 2.2E-161 T 13-10-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 Y11_31521 ca96561909da56598ac3e10e690e6900 414 SUPERFAMILY SSF51604 164 411 3.01E-76 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Y11_31521 ca96561909da56598ac3e10e690e6900 414 Pfam PF07476 Methylaspartate ammonia-lyase C-terminus 162 409 2.4E-115 T 13-10-2018 IPR022662 Methylaspartate ammonia-lyase, C-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 Y11_31521 ca96561909da56598ac3e10e690e6900 414 SUPERFAMILY SSF54826 1 159 9.28E-58 T 13-10-2018 Y11_31521 ca96561909da56598ac3e10e690e6900 414 Gene3D G3DSA:3.20.20.120 165 413 2.3E-106 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Y11_31521 ca96561909da56598ac3e10e690e6900 414 PIRSF PIRSF017107 1 413 5.5E-221 T 13-10-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 Y11_31521 ca96561909da56598ac3e10e690e6900 414 Pfam PF05034 Methylaspartate ammonia-lyase N-terminus 1 159 2.0E-70 T 13-10-2018 IPR022665 Methylaspartate ammonia-lyase, N-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 Y11_39441 7b0dde13431f6fa4a2a280c4768f91ff 530 SUPERFAMILY SSF49503 34 168 3.97E-31 T 13-10-2018 IPR008972 Cupredoxin Y11_39441 7b0dde13431f6fa4a2a280c4768f91ff 530 Pfam PF00394 Multicopper oxidase 219 290 5.3E-6 T 13-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 Y11_39441 7b0dde13431f6fa4a2a280c4768f91ff 530 Pfam PF07731 Multicopper oxidase 414 529 1.6E-24 T 13-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 Y11_39441 7b0dde13431f6fa4a2a280c4768f91ff 530 SUPERFAMILY SSF49503 172 291 4.16E-32 T 13-10-2018 IPR008972 Cupredoxin Y11_39441 7b0dde13431f6fa4a2a280c4768f91ff 530 Gene3D G3DSA:2.60.40.420 346 529 4.4E-49 T 13-10-2018 IPR008972 Cupredoxin Y11_39441 7b0dde13431f6fa4a2a280c4768f91ff 530 Gene3D G3DSA:2.60.40.420 30 175 8.1E-45 T 13-10-2018 IPR008972 Cupredoxin Y11_39441 7b0dde13431f6fa4a2a280c4768f91ff 530 Pfam PF07732 Multicopper oxidase 55 166 1.7E-32 T 13-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 Y11_39441 7b0dde13431f6fa4a2a280c4768f91ff 530 ProSitePatterns PS00080 Multicopper oxidases signature 2. 511 522 - T 13-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 Y11_39441 7b0dde13431f6fa4a2a280c4768f91ff 530 Gene3D G3DSA:2.60.40.420 176 326 3.5E-44 T 13-10-2018 IPR008972 Cupredoxin Y11_39441 7b0dde13431f6fa4a2a280c4768f91ff 530 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 22 3.0E-5 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Y11_39441 7b0dde13431f6fa4a2a280c4768f91ff 530 SUPERFAMILY SSF49503 391 528 2.79E-26 T 13-10-2018 IPR008972 Cupredoxin Y11_27881 0a3c4c268dc162c4c6a07fe44e3fc6c9 63 SUPERFAMILY SSF48295 4 41 1.46E-9 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Y11_28571 d3301ad1e816bd630c03da62d5f47b7f 254 Pfam PF00665 Integrase core domain 132 219 2.9E-8 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_28571 d3301ad1e816bd630c03da62d5f47b7f 254 Gene3D G3DSA:1.10.10.60 7 41 2.5E-6 T 13-10-2018 Y11_36241 fb09e90b89f56b9aed5d3d96f6bfcbc8 72 Pfam PF07338 Protein of unknown function (DUF1471) 17 72 1.8E-19 T 13-10-2018 IPR010854 Domain of unknown function DUF1471 Y11_36241 fb09e90b89f56b9aed5d3d96f6bfcbc8 72 SUPERFAMILY SSF159871 6 72 1.83E-20 T 13-10-2018 IPR036275 YdgH-like superfamily Y11_36241 fb09e90b89f56b9aed5d3d96f6bfcbc8 72 Gene3D G3DSA:3.30.1660.10 2 72 1.4E-16 T 13-10-2018 IPR025543 Dodecin-like Y11_11911 610922df3624e48e53e12b9bf2ea692f 271 Gene3D G3DSA:3.20.20.410 1 253 1.9E-41 T 13-10-2018 IPR036520 UPF0759 superfamily Y11_11911 610922df3624e48e53e12b9bf2ea692f 271 Pfam PF01904 Protein of unknown function DUF72 20 248 8.7E-51 T 13-10-2018 IPR002763 Protein of unknown function DUF72 Y11_11911 610922df3624e48e53e12b9bf2ea692f 271 SUPERFAMILY SSF117396 1 251 9.02E-65 T 13-10-2018 IPR036520 UPF0759 superfamily Y11_18151 aa27f425cae5013204b753f7bdb36d94 237 SUPERFAMILY SSF52540 3 214 3.29E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_18151 aa27f425cae5013204b753f7bdb36d94 237 PIRSF PIRSF006755 1 228 1.9E-81 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Y11_18151 aa27f425cae5013204b753f7bdb36d94 237 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 2.6E-59 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Y11_18151 aa27f425cae5013204b753f7bdb36d94 237 Gene3D G3DSA:3.40.50.300 3 230 3.8E-69 T 13-10-2018 Y11_18151 aa27f425cae5013204b753f7bdb36d94 237 Pfam PF13500 AAA domain 4 211 4.9E-35 T 13-10-2018 Y11_18151 aa27f425cae5013204b753f7bdb36d94 237 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 213 29.208 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Y11_14261 d98147112888ce664064eb5d40193e95 156 Pfam PF03748 Flagellar basal body-associated protein FliL 54 154 2.8E-21 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Y11_p0201 6a62f52f84aeb2a362324e473b060c44 50 SUPERFAMILY SSF53098 2 49 3.19E-8 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_p0201 6a62f52f84aeb2a362324e473b060c44 50 Pfam PF13683 Integrase core domain 1 49 1.8E-17 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_29381 1fb7f8181d5a58f2e5e39a528b822c07 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 457 2.4E-220 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Y11_29381 1fb7f8181d5a58f2e5e39a528b822c07 457 Pfam PF06969 HemN C-terminal domain 364 431 1.1E-10 T 13-10-2018 IPR010723 HemN, C-terminal Y11_29381 1fb7f8181d5a58f2e5e39a528b822c07 457 PIRSF PIRSF000167 4 454 4.2E-174 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Y11_29381 1fb7f8181d5a58f2e5e39a528b822c07 457 SUPERFAMILY SSF102114 6 444 2.22E-146 T 13-10-2018 Y11_29381 1fb7f8181d5a58f2e5e39a528b822c07 457 Gene3D G3DSA:1.10.10.920 364 457 2.3E-36 T 13-10-2018 Y11_29381 1fb7f8181d5a58f2e5e39a528b822c07 457 Gene3D G3DSA:3.80.30.20 1 363 1.1E-138 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Y11_29381 1fb7f8181d5a58f2e5e39a528b822c07 457 SMART SM00729 52 272 1.7E-55 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Y11_29381 1fb7f8181d5a58f2e5e39a528b822c07 457 Pfam PF04055 Radical SAM superfamily 57 226 2.2E-16 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_40091 732f7fa1853c29053db09929ae2dc0e4 577 Gene3D G3DSA:2.40.50.460 459 576 2.2E-7 T 13-10-2018 Y11_40091 732f7fa1853c29053db09929ae2dc0e4 577 Pfam PF01368 DHH family 74 179 6.3E-9 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Y11_40091 732f7fa1853c29053db09929ae2dc0e4 577 SUPERFAMILY SSF64182 49 466 1.7E-116 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily Y11_40091 732f7fa1853c29053db09929ae2dc0e4 577 Gene3D G3DSA:3.10.310.30 328 458 1.1E-30 T 13-10-2018 Y11_40091 732f7fa1853c29053db09929ae2dc0e4 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 573 2.0E-161 T 13-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 Y11_40091 732f7fa1853c29053db09929ae2dc0e4 577 Gene3D G3DSA:3.90.1640.30 48 326 8.1E-90 T 13-10-2018 Y11_40091 732f7fa1853c29053db09929ae2dc0e4 577 Pfam PF02272 DHHA1 domain 322 452 4.0E-27 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Y11_18621 653eed500e647aa4b388f3288b00841f 588 Gene3D G3DSA:1.20.58.100 431 547 6.7E-39 T 13-10-2018 Y11_18621 653eed500e647aa4b388f3288b00841f 588 SUPERFAMILY SSF51905 4 441 2.09E-76 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_18621 653eed500e647aa4b388f3288b00841f 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 6.2E-241 T 13-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_18621 653eed500e647aa4b388f3288b00841f 588 SUPERFAMILY SSF46977 452 588 2.22E-44 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_18621 653eed500e647aa4b388f3288b00841f 588 SUPERFAMILY SSF56425 236 356 6.58E-42 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_18621 653eed500e647aa4b388f3288b00841f 588 Gene3D G3DSA:3.50.50.60 9 416 5.5E-172 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_18621 653eed500e647aa4b388f3288b00841f 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 3.5E-34 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_18621 653eed500e647aa4b388f3288b00841f 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 13-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_18621 653eed500e647aa4b388f3288b00841f 588 Pfam PF00890 FAD binding domain 9 405 7.7E-117 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_18621 653eed500e647aa4b388f3288b00841f 588 PIRSF PIRSF000171 1 580 6.1E-46 T 13-10-2018 Y11_18621 653eed500e647aa4b388f3288b00841f 588 Gene3D G3DSA:3.90.700.10 246 350 5.5E-172 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_18621 653eed500e647aa4b388f3288b00841f 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.0E-5 T 13-10-2018 Y11_18621 653eed500e647aa4b388f3288b00841f 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 7.0E-5 T 13-10-2018 Y11_18621 653eed500e647aa4b388f3288b00841f 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 5.3E-275 T 13-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_18621 653eed500e647aa4b388f3288b00841f 588 Gene3D G3DSA:4.10.80.40 548 588 7.9E-25 T 13-10-2018 Y11_15261 5fc53e315d323e73d1acf361a2f755e0 300 SUPERFAMILY SSF51197 93 233 4.67E-18 T 13-10-2018 Y11_15261 5fc53e315d323e73d1acf361a2f755e0 300 Gene3D G3DSA:2.60.120.330 43 227 3.4E-40 T 13-10-2018 IPR027443 Isopenicillin N synthase-like Y11_15261 5fc53e315d323e73d1acf361a2f755e0 300 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 69 222 3.9E-47 T 13-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 Y11_p0561 177b389cb98c490068da8cf562a906bd 212 Pfam PF02108 Flagellar assembly protein FliH 74 194 4.2E-19 T 13-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Y11_p0561 177b389cb98c490068da8cf562a906bd 212 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 187 2.6E-48 T 13-10-2018 IPR012842 Type III secretion system HrpE/YscL Y11_p0561 177b389cb98c490068da8cf562a906bd 212 SUPERFAMILY SSF160527 102 200 1.01E-5 T 13-10-2018 Y11_20761 cf4053ad82997e369c98f2ea87e86f7c 294 Gene3D G3DSA:3.90.650.10 111 288 7.4E-59 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Y11_20761 cf4053ad82997e369c98f2ea87e86f7c 294 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 287 24.605 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Y11_20761 cf4053ad82997e369c98f2ea87e86f7c 294 SUPERFAMILY SSF55326 5 103 7.67E-27 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Y11_20761 cf4053ad82997e369c98f2ea87e86f7c 294 Pfam PF00586 AIR synthase related protein, N-terminal domain 7 103 3.5E-20 T 13-10-2018 IPR016188 PurM-like, N-terminal domain Y11_20761 cf4053ad82997e369c98f2ea87e86f7c 294 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 287 5.1E-105 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Y11_20761 cf4053ad82997e369c98f2ea87e86f7c 294 PIRSF PIRSF005303 1 287 6.2E-82 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Y11_20761 cf4053ad82997e369c98f2ea87e86f7c 294 Pfam PF02769 AIR synthase related protein, C-terminal domain 116 264 8.1E-11 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Y11_20761 cf4053ad82997e369c98f2ea87e86f7c 294 SUPERFAMILY SSF56042 108 268 7.48E-41 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Y11_20761 cf4053ad82997e369c98f2ea87e86f7c 294 Gene3D G3DSA:3.30.1330.10 1 109 8.6E-34 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 SMART SM01097 1 98 7.7E-47 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 PRINTS PR00097 Anthranilate synthase component II signature 201 210 9.2E-6 T 13-10-2018 Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 PRINTS PR00097 Anthranilate synthase component II signature 229 240 9.2E-6 T 13-10-2018 Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 PRINTS PR00097 Anthranilate synthase component II signature 314 327 9.2E-6 T 13-10-2018 Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 PRINTS PR00096 Glutamine amidotransferase superfamily signature 314 327 2.6E-11 T 13-10-2018 Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 PRINTS PR00096 Glutamine amidotransferase superfamily signature 229 240 2.6E-11 T 13-10-2018 Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 PRINTS PR00096 Glutamine amidotransferase superfamily signature 201 210 2.6E-11 T 13-10-2018 Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 SUPERFAMILY SSF52021 1 108 2.35E-40 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 SUPERFAMILY SSF52317 118 343 7.18E-64 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 198 212 2.1E-40 T 13-10-2018 Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 159 173 2.1E-40 T 13-10-2018 Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 271 282 2.1E-40 T 13-10-2018 Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 229 245 2.1E-40 T 13-10-2018 Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 246 263 2.1E-40 T 13-10-2018 Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 Gene3D G3DSA:3.40.50.880 117 344 1.7E-76 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 343 39.991 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 1 97 5.0E-37 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 Pfam PF00117 Glutamine amidotransferase class-I 162 337 7.3E-49 T 13-10-2018 IPR017926 Glutamine amidotransferase Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 1 340 5.4E-134 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_38521 eb1099de0ee9de6fce0f6d4f13cf6484 352 Gene3D G3DSA:3.50.30.20 1 116 8.9E-44 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Y11_42221 7d3abb5c02ac55c6f47d73305f231009 250 SUPERFAMILY SSF48403 47 232 2.23E-33 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Y11_42221 7d3abb5c02ac55c6f47d73305f231009 250 Pfam PF12796 Ankyrin repeats (3 copies) 81 173 3.5E-8 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain Y11_42221 7d3abb5c02ac55c6f47d73305f231009 250 Pfam PF00023 Ankyrin repeat 176 207 0.017 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Y11_42221 7d3abb5c02ac55c6f47d73305f231009 250 SMART SM00248 75 104 330.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Y11_42221 7d3abb5c02ac55c6f47d73305f231009 250 SMART SM00248 142 171 240.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Y11_42221 7d3abb5c02ac55c6f47d73305f231009 250 SMART SM00248 175 204 0.066 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Y11_42221 7d3abb5c02ac55c6f47d73305f231009 250 SMART SM00248 108 137 26.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Y11_42221 7d3abb5c02ac55c6f47d73305f231009 250 Gene3D G3DSA:1.25.40.20 46 239 1.5E-29 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Y11_p0211 a72393e9a9def4842a690b8bafa2f525 61 Pfam PF00665 Integrase core domain 6 59 4.8E-8 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_p0211 a72393e9a9def4842a690b8bafa2f525 61 SUPERFAMILY SSF53098 5 59 1.46E-12 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_p0211 a72393e9a9def4842a690b8bafa2f525 61 Gene3D G3DSA:3.30.420.10 2 61 2.7E-7 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_06761 ba52674682edd3ced154965785c2841f 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Y11_06761 ba52674682edd3ced154965785c2841f 259 Pfam PF00455 DeoR C terminal sensor domain 77 232 4.7E-47 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain Y11_06761 ba52674682edd3ced154965785c2841f 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.4E-6 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_06761 ba52674682edd3ced154965785c2841f 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.4E-6 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_06761 ba52674682edd3ced154965785c2841f 259 SMART SM01134 73 233 8.7E-60 T 13-10-2018 Y11_06761 ba52674682edd3ced154965785c2841f 259 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.3E-17 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_06761 ba52674682edd3ced154965785c2841f 259 SUPERFAMILY SSF46785 5 71 3.48E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_06761 ba52674682edd3ced154965785c2841f 259 Gene3D G3DSA:1.10.10.10 2 57 5.6E-9 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_06761 ba52674682edd3ced154965785c2841f 259 SMART SM00420 6 58 1.1E-23 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_06761 ba52674682edd3ced154965785c2841f 259 SUPERFAMILY SSF100950 75 233 2.51E-25 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_04511 76e50a91e4cd15247204c84874063a30 370 SUPERFAMILY SSF50800 3 264 1.52E-16 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Y11_04511 76e50a91e4cd15247204c84874063a30 370 SUPERFAMILY SSF54292 284 367 4.33E-20 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Y11_04511 76e50a91e4cd15247204c84874063a30 370 SUPERFAMILY SSF141673 5 133 5.36E-29 T 13-10-2018 Y11_04511 76e50a91e4cd15247204c84874063a30 370 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 323 331 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Y11_04511 76e50a91e4cd15247204c84874063a30 370 Pfam PF03473 MOSC domain 140 262 1.9E-27 T 13-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 Y11_04511 76e50a91e4cd15247204c84874063a30 370 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 298 362 4.6E-12 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Y11_04511 76e50a91e4cd15247204c84874063a30 370 Pfam PF03476 MOSC N-terminal beta barrel domain 3 117 3.5E-29 T 13-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 Y11_04511 76e50a91e4cd15247204c84874063a30 370 Gene3D G3DSA:3.10.20.30 277 369 2.5E-16 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Y11_06271 e99fed5ae42edd58cf57f1d078983331 153 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 22 144 2.0E-59 T 13-10-2018 IPR009328 Protein of unknown function DUF986 Y11_06271 e99fed5ae42edd58cf57f1d078983331 153 PIRSF PIRSF020687 1 152 7.5E-71 T 13-10-2018 IPR009328 Protein of unknown function DUF986 Y11_06271 e99fed5ae42edd58cf57f1d078983331 153 Pfam PF06173 Protein of unknown function (DUF986) 4 151 1.8E-65 T 13-10-2018 IPR009328 Protein of unknown function DUF986 Y11_06271 e99fed5ae42edd58cf57f1d078983331 153 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 32.309 T 13-10-2018 IPR009328 Protein of unknown function DUF986 Y11_39651 e149a6f07114e26a5f63c096361b9b56 410 Gene3D G3DSA:1.20.1250.20 188 409 5.5E-59 T 13-10-2018 Y11_39651 e149a6f07114e26a5f63c096361b9b56 410 SUPERFAMILY SSF103473 10 407 3.27E-30 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_39651 e149a6f07114e26a5f63c096361b9b56 410 Pfam PF07690 Major Facilitator Superfamily 12 323 4.7E-12 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_39651 e149a6f07114e26a5f63c096361b9b56 410 Gene3D G3DSA:1.20.1250.20 1 185 3.0E-59 T 13-10-2018 Y11_15281 1615fdbd3f93708df8e3151c4da54433 325 Gene3D G3DSA:3.40.190.170 28 325 7.6E-112 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Y11_15281 1615fdbd3f93708df8e3151c4da54433 325 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 310 3.0E-72 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Y11_15281 1615fdbd3f93708df8e3151c4da54433 325 PIRSF PIRSF006470 5 325 9.0E-97 T 13-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Y11_15281 1615fdbd3f93708df8e3151c4da54433 325 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 34 286 5.1E-64 T 13-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Y11_p1071 403dfb60aa8372bc6de83a401237fca8 160 Pfam PF13091 PLD-like domain 27 150 7.9E-24 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Y11_p1071 403dfb60aa8372bc6de83a401237fca8 160 SUPERFAMILY SSF56024 13 155 1.7E-32 T 13-10-2018 Y11_p1071 403dfb60aa8372bc6de83a401237fca8 160 Gene3D G3DSA:3.30.870.10 7 160 1.0E-39 T 13-10-2018 Y11_p1071 403dfb60aa8372bc6de83a401237fca8 160 SMART SM00155 94 121 8.6E-5 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Y11_17301 1c17faab706c0079db0b150356cb56d9 436 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 328 418 5.8E-12 T 13-10-2018 IPR023885 4Fe4S-binding SPASM domain Y11_17301 1c17faab706c0079db0b150356cb56d9 436 Gene3D G3DSA:3.20.20.70 73 436 2.4E-80 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_17301 1c17faab706c0079db0b150356cb56d9 436 SUPERFAMILY SSF102114 75 400 6.41E-37 T 13-10-2018 Y11_17301 1c17faab706c0079db0b150356cb56d9 436 Pfam PF04055 Radical SAM superfamily 80 244 8.8E-11 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_37181 9b99370f530952bd2255bf3936e97c2f 63 Pfam PF03466 LysR substrate binding domain 3 58 1.1E-7 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_37181 9b99370f530952bd2255bf3936e97c2f 63 Gene3D G3DSA:3.40.190.290 1 59 2.9E-11 T 13-10-2018 Y11_37181 9b99370f530952bd2255bf3936e97c2f 63 SUPERFAMILY SSF53850 3 61 3.62E-8 T 13-10-2018 Y11_38451 905c9dffa6c1b5a45c881e81edf535af 87 SUPERFAMILY SSF46992 3 86 3.53E-32 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_38451 905c9dffa6c1b5a45c881e81edf535af 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 7.4E-34 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_38451 905c9dffa6c1b5a45c881e81edf535af 87 Pfam PF01649 Ribosomal protein S20 2 84 6.5E-28 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_38451 905c9dffa6c1b5a45c881e81edf535af 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 87 3.0E-36 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_38451 905c9dffa6c1b5a45c881e81edf535af 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.616 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_38451 905c9dffa6c1b5a45c881e81edf535af 87 Gene3D G3DSA:1.20.58.110 1 87 1.9E-31 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_06141 3cb80296b74c51d6e91534ad3c9139bf 99 Pfam PF10765 Protein of unknown function (DUF2591) 29 97 1.8E-13 T 13-10-2018 IPR019701 Bacteriophage P22, NinX Y11_01311 267bef4a3002d6573b6004955cae5f3d 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 1.3E-72 T 13-10-2018 Y11_01311 267bef4a3002d6573b6004955cae5f3d 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 26 47 1.3E-72 T 13-10-2018 Y11_01311 267bef4a3002d6573b6004955cae5f3d 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 98 1.3E-72 T 13-10-2018 Y11_01311 267bef4a3002d6573b6004955cae5f3d 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 1.3E-72 T 13-10-2018 Y11_01311 267bef4a3002d6573b6004955cae5f3d 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 52 69 1.3E-72 T 13-10-2018 Y11_01311 267bef4a3002d6573b6004955cae5f3d 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 100 118 1.3E-72 T 13-10-2018 Y11_01311 267bef4a3002d6573b6004955cae5f3d 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 5 215 8.8E-97 T 13-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria Y11_01311 267bef4a3002d6573b6004955cae5f3d 219 PIRSF PIRSF002764 1 219 1.6E-86 T 13-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria Y11_01311 267bef4a3002d6573b6004955cae5f3d 219 Pfam PF03379 CcmB protein 3 216 7.9E-93 T 13-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_25131 8cf9dea40d465e8156e586040ade35ba 90 Pfam PF02371 Transposase IS116/IS110/IS902 family 2 38 3.8E-7 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_36791 333fe5a56a22de820b79dae188c6a658 340 SUPERFAMILY SSF51679 8 329 4.06E-86 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Y11_36791 333fe5a56a22de820b79dae188c6a658 340 Gene3D G3DSA:3.20.20.30 3 332 3.5E-99 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Y11_36791 333fe5a56a22de820b79dae188c6a658 340 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 329 4.7E-139 T 13-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 Y11_36791 333fe5a56a22de820b79dae188c6a658 340 Pfam PF00296 Luciferase-like monooxygenase 22 244 1.1E-31 T 13-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Y11_35391 7690b83373b2c54ffd5e0f9af364214a 679 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 16 668 6.6E-269 T 13-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 Y11_35391 7690b83373b2c54ffd5e0f9af364214a 679 Gene3D G3DSA:1.10.8.540 484 572 4.5E-31 T 13-10-2018 Y11_35391 7690b83373b2c54ffd5e0f9af364214a 679 Pfam PF00771 FHIPEP family 29 660 5.8E-214 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_35391 7690b83373b2c54ffd5e0f9af364214a 679 Gene3D G3DSA:1.10.490.80 574 668 9.4E-25 T 13-10-2018 Y11_35391 7690b83373b2c54ffd5e0f9af364214a 679 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 134 150 2.3E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_35391 7690b83373b2c54ffd5e0f9af364214a 679 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 72 91 2.3E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_35391 7690b83373b2c54ffd5e0f9af364214a 679 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 183 200 2.3E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_35391 7690b83373b2c54ffd5e0f9af364214a 679 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 153 171 2.3E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_35391 7690b83373b2c54ffd5e0f9af364214a 679 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 35 48 2.3E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_35391 7690b83373b2c54ffd5e0f9af364214a 679 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 234 248 2.3E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_35391 7690b83373b2c54ffd5e0f9af364214a 679 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 139 162 - T 13-10-2018 IPR025505 FHIPEP conserved site Y11_35391 7690b83373b2c54ffd5e0f9af364214a 679 Gene3D G3DSA:3.40.30.60 357 483 4.0E-11 T 13-10-2018 Y11_35391 7690b83373b2c54ffd5e0f9af364214a 679 PIRSF PIRSF005419 1 673 1.1E-220 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_21671 cd65202233f4f17fc2a598b7067af349 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 106 4.2E-29 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Y11_21671 cd65202233f4f17fc2a598b7067af349 217 SUPERFAMILY SSF161098 12 203 7.06E-39 T 13-10-2018 IPR035906 MetI-like superfamily Y11_21671 cd65202233f4f17fc2a598b7067af349 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 210 1.7E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_21671 cd65202233f4f17fc2a598b7067af349 217 Gene3D G3DSA:1.10.3720.10 5 215 1.2E-46 T 13-10-2018 IPR035906 MetI-like superfamily Y11_26381 9734830ccfed4e6d46c2ffbb8c283585 84 Pfam PF01722 BolA-like protein 20 74 1.6E-14 T 13-10-2018 IPR002634 BolA protein Y11_26381 9734830ccfed4e6d46c2ffbb8c283585 84 PIRSF PIRSF003113 1 83 2.1E-21 T 13-10-2018 IPR002634 BolA protein Y11_26381 9734830ccfed4e6d46c2ffbb8c283585 84 SUPERFAMILY SSF82657 2 82 6.02E-29 T 13-10-2018 IPR036065 BolA-like superfamily Y11_26381 9734830ccfed4e6d46c2ffbb8c283585 84 Gene3D G3DSA:3.30.300.90 1 84 4.7E-36 T 13-10-2018 Y11_15421 605b99e2273879272835dd5346afd3f6 443 PIRSF PIRSF002808 9 443 1.1E-128 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 Y11_15421 605b99e2273879272835dd5346afd3f6 443 Gene3D G3DSA:1.20.1250.20 20 224 9.9E-52 T 13-10-2018 Y11_15421 605b99e2273879272835dd5346afd3f6 443 SUPERFAMILY SSF103473 13 431 1.03E-77 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_15421 605b99e2273879272835dd5346afd3f6 443 Pfam PF07690 Major Facilitator Superfamily 37 397 8.3E-52 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_15421 605b99e2273879272835dd5346afd3f6 443 Gene3D G3DSA:1.20.1250.20 241 437 1.3E-38 T 13-10-2018 Y11_18451 f44f999ef3cc34a8ef23a62fb9a40c2e 269 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 149 266 6.0E-44 T 13-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal Y11_18451 f44f999ef3cc34a8ef23a62fb9a40c2e 269 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 6 269 20.402 T 13-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 Y11_18451 f44f999ef3cc34a8ef23a62fb9a40c2e 269 Pfam PF13174 Tetratricopeptide repeat 224 256 1.8E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_18451 f44f999ef3cc34a8ef23a62fb9a40c2e 269 Pfam PF16331 TolA binding protein trimerisation 37 109 1.7E-25 T 13-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 Y11_18451 f44f999ef3cc34a8ef23a62fb9a40c2e 269 SUPERFAMILY SSF48452 158 262 2.59E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_18451 f44f999ef3cc34a8ef23a62fb9a40c2e 269 Gene3D G3DSA:1.20.5.110 35 113 2.6E-34 T 13-10-2018 Y11_18451 f44f999ef3cc34a8ef23a62fb9a40c2e 269 Gene3D G3DSA:1.25.40.10 149 269 4.4E-32 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_18451 f44f999ef3cc34a8ef23a62fb9a40c2e 269 Pfam PF13432 Tetratricopeptide repeat 156 220 3.1E-10 T 13-10-2018 Y11_40151 bd5eff477300d989e756e0c44e98d511 98 Gene3D G3DSA:3.30.2310.40 1 98 1.9E-40 T 13-10-2018 IPR038493 Toxin MqsR superfamily Y11_40151 bd5eff477300d989e756e0c44e98d511 98 Pfam PF15723 Motility quorum-sensing regulator, toxin of MqsA 5 97 2.1E-32 T 13-10-2018 IPR031451 mRNA interferase toxin MqsR GO:0009372|GO:0017148|GO:0044010 Y11_18561 076bd3193c913d3fd3fb5074e8453ffb 632 PRINTS PR01607 Apyrase family signature 226 249 4.1E-11 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_18561 076bd3193c913d3fd3fb5074e8453ffb 632 PRINTS PR01607 Apyrase family signature 253 273 4.1E-11 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_18561 076bd3193c913d3fd3fb5074e8453ffb 632 PRINTS PR01607 Apyrase family signature 22 40 4.1E-11 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_18561 076bd3193c913d3fd3fb5074e8453ffb 632 PRINTS PR01607 Apyrase family signature 199 216 4.1E-11 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_18561 076bd3193c913d3fd3fb5074e8453ffb 632 Pfam PF02872 5'-nucleotidase, C-terminal domain 338 488 1.3E-19 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_18561 076bd3193c913d3fd3fb5074e8453ffb 632 Pfam PF00149 Calcineurin-like phosphoesterase 25 243 1.3E-13 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Y11_18561 076bd3193c913d3fd3fb5074e8453ffb 632 Gene3D G3DSA:3.90.780.10 326 541 4.9E-29 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_18561 076bd3193c913d3fd3fb5074e8453ffb 632 ProSitePatterns PS00786 5'-nucleotidase signature 2. 103 114 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_18561 076bd3193c913d3fd3fb5074e8453ffb 632 SUPERFAMILY SSF56300 15 323 3.07E-76 T 13-10-2018 Y11_18561 076bd3193c913d3fd3fb5074e8453ffb 632 Gene3D G3DSA:3.60.21.10 17 323 3.2E-76 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Y11_18561 076bd3193c913d3fd3fb5074e8453ffb 632 SUPERFAMILY SSF55816 337 546 5.1E-24 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Y11_28251 3c70d0f9b719c2626392c54ab9991576 79 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.854 T 13-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 Y11_28251 3c70d0f9b719c2626392c54ab9991576 79 Gene3D G3DSA:1.20.5.340 1 79 1.5E-32 T 13-10-2018 Y11_28251 3c70d0f9b719c2626392c54ab9991576 79 Pfam PF06005 Cell division protein ZapB 1 78 3.5E-28 T 13-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 Y11_28221 69f89054da9030d9d07c689504e9dca4 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 4.1E-231 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Y11_28221 69f89054da9030d9d07c689504e9dca4 443 SMART SM00382 49 332 9.5E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_28221 69f89054da9030d9d07c689504e9dca4 443 SMART SM01086 335 434 6.4E-24 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Y11_28221 69f89054da9030d9d07c689504e9dca4 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 187 329 1.9E-41 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Y11_28221 69f89054da9030d9d07c689504e9dca4 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 102 9.2E-7 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Y11_28221 69f89054da9030d9d07c689504e9dca4 443 Gene3D G3DSA:1.10.8.60 335 440 8.4E-42 T 13-10-2018 Y11_28221 69f89054da9030d9d07c689504e9dca4 443 SUPERFAMILY SSF52540 3 441 8.82E-95 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_28221 69f89054da9030d9d07c689504e9dca4 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.605 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Y11_28221 69f89054da9030d9d07c689504e9dca4 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 1.5E-6 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Y11_02521 b2973f6e2921a74cbddbf49bed0d0c22 402 Gene3D G3DSA:1.20.1740.10 2 400 9.7E-7 T 13-10-2018 Y11_02521 b2973f6e2921a74cbddbf49bed0d0c22 402 Pfam PF03222 Tryptophan/tyrosine permease family 3 389 2.9E-136 T 13-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 Y11_02521 b2973f6e2921a74cbddbf49bed0d0c22 402 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 383 8.6E-139 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_02521 b2973f6e2921a74cbddbf49bed0d0c22 402 PRINTS PR00166 Aromatic amino acid permease signature 148 168 3.8E-90 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_02521 b2973f6e2921a74cbddbf49bed0d0c22 402 PRINTS PR00166 Aromatic amino acid permease signature 221 240 3.8E-90 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_02521 b2973f6e2921a74cbddbf49bed0d0c22 402 PRINTS PR00166 Aromatic amino acid permease signature 316 334 3.8E-90 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_02521 b2973f6e2921a74cbddbf49bed0d0c22 402 PRINTS PR00166 Aromatic amino acid permease signature 37 56 3.8E-90 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_02521 b2973f6e2921a74cbddbf49bed0d0c22 402 PRINTS PR00166 Aromatic amino acid permease signature 82 102 3.8E-90 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_02521 b2973f6e2921a74cbddbf49bed0d0c22 402 PRINTS PR00166 Aromatic amino acid permease signature 282 301 3.8E-90 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_02521 b2973f6e2921a74cbddbf49bed0d0c22 402 PRINTS PR00166 Aromatic amino acid permease signature 337 356 3.8E-90 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_02521 b2973f6e2921a74cbddbf49bed0d0c22 402 PRINTS PR00166 Aromatic amino acid permease signature 10 33 3.8E-90 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_02521 b2973f6e2921a74cbddbf49bed0d0c22 402 PRINTS PR00166 Aromatic amino acid permease signature 182 204 3.8E-90 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_02521 b2973f6e2921a74cbddbf49bed0d0c22 402 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 13-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site Y11_05491 bec7f461dded1ef13854ff061bad6ad0 180 Gene3D G3DSA:3.40.50.1820 1 179 3.8E-18 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_05491 bec7f461dded1ef13854ff061bad6ad0 180 SUPERFAMILY SSF53474 1 176 1.43E-6 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_05491 bec7f461dded1ef13854ff061bad6ad0 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 4.9E-68 T 13-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA Y11_05491 bec7f461dded1ef13854ff061bad6ad0 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 50.96 T 13-10-2018 IPR022987 Uncharacterised protein family UPF0227 Y11_34981 50f5b6d45c4f94ecc6073d873cd4c5fa 262 Gene3D G3DSA:3.20.20.70 1 254 2.7E-106 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_34981 50f5b6d45c4f94ecc6073d873cd4c5fa 262 SUPERFAMILY SSF110399 1 237 6.28E-82 T 13-10-2018 Y11_34981 50f5b6d45c4f94ecc6073d873cd4c5fa 262 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 248 3.0E-105 T 13-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Y11_34981 50f5b6d45c4f94ecc6073d873cd4c5fa 262 Hamap MF_00443 Thiazole synthase [thiG]. 1 254 42.927 T 13-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Y11_23111 1c08f1b9051a22d412810903a4065e7a 289 SUPERFAMILY SSF50182 114 179 7.52E-17 T 13-10-2018 IPR010920 LSM domain superfamily Y11_23111 1c08f1b9051a22d412810903a4065e7a 289 Gene3D G3DSA:3.30.70.100 179 273 2.3E-25 T 13-10-2018 Y11_23111 1c08f1b9051a22d412810903a4065e7a 289 Pfam PF00924 Mechanosensitive ion channel 72 268 3.5E-55 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Y11_23111 1c08f1b9051a22d412810903a4065e7a 289 SUPERFAMILY SSF82861 28 112 1.29E-15 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Y11_23111 1c08f1b9051a22d412810903a4065e7a 289 SUPERFAMILY SSF82689 181 279 1.44E-30 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Y11_23111 1c08f1b9051a22d412810903a4065e7a 289 Pfam PF05552 Conserved TM helix 15 64 3.6E-14 T 13-10-2018 IPR008910 Conserved TM helix Y11_23111 1c08f1b9051a22d412810903a4065e7a 289 Gene3D G3DSA:2.30.30.60 129 177 8.1E-21 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Y11_23111 1c08f1b9051a22d412810903a4065e7a 289 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 13-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.9E-27 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 Gene3D G3DSA:1.10.274.100 490 640 1.1E-37 T 13-10-2018 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1377 19.012 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 SMART SM00663 235 514 1.1E-184 T 13-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 Gene3D G3DSA:1.10.132.30 641 790 4.3E-66 T 13-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.6E-89 T 13-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 Gene3D G3DSA:1.10.150.390 1316 1375 2.7E-28 T 13-10-2018 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 Gene3D G3DSA:1.10.40.90 374 416 2.0E-21 T 13-10-2018 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.4E-18 T 13-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 Gene3D G3DSA:2.40.50.100 1023 1126 1.7E-28 T 13-10-2018 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 Gene3D G3DSA:1.10.1790.20 1135 1314 1.3E-59 T 13-10-2018 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 3.9E-27 T 13-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 SUPERFAMILY SSF64484 16 1364 0.0 T 13-10-2018 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 Gene3D G3DSA:2.40.50.100 948 1022 9.2E-26 T 13-10-2018 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 Gene3D G3DSA:2.40.50.100 1151 1215 1.3E-59 T 13-10-2018 Y11_34951 82b5767af943ec4261fa28f3ab5ae4c6 1406 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 1.7E-78 T 13-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_22431 823e36ea76e0be8abef4d614d00355ca 115 Gene3D G3DSA:1.10.10.10 3 111 4.9E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_22431 823e36ea76e0be8abef4d614d00355ca 115 Pfam PF12840 Helix-turn-helix domain 15 65 8.3E-9 T 13-10-2018 Y11_22431 823e36ea76e0be8abef4d614d00355ca 115 SUPERFAMILY SSF46785 3 92 1.38E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_22431 823e36ea76e0be8abef4d614d00355ca 115 SMART SM00418 15 92 3.1E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Y11_09181 3f14021eb6f9ad611eef659144dc2b5a 246 Gene3D G3DSA:3.40.50.720 2 245 4.8E-77 T 13-10-2018 Y11_09181 3f14021eb6f9ad611eef659144dc2b5a 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 2.1E-60 T 13-10-2018 Y11_09181 3f14021eb6f9ad611eef659144dc2b5a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.5E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09181 3f14021eb6f9ad611eef659144dc2b5a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.5E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09181 3f14021eb6f9ad611eef659144dc2b5a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.5E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09181 3f14021eb6f9ad611eef659144dc2b5a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.5E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09181 3f14021eb6f9ad611eef659144dc2b5a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.5E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09181 3f14021eb6f9ad611eef659144dc2b5a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.5E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09181 3f14021eb6f9ad611eef659144dc2b5a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.5E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09181 3f14021eb6f9ad611eef659144dc2b5a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.5E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09181 3f14021eb6f9ad611eef659144dc2b5a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.5E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_09181 3f14021eb6f9ad611eef659144dc2b5a 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 185 0.0043 T 13-10-2018 Y11_09181 3f14021eb6f9ad611eef659144dc2b5a 246 SUPERFAMILY SSF51735 7 245 3.1E-77 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_09141 62769790893e27bbba9bc82d11dac9a4 172 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 6.7E-38 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Y11_09141 62769790893e27bbba9bc82d11dac9a4 172 Gene3D G3DSA:1.10.10.10 86 169 6.3E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_09141 62769790893e27bbba9bc82d11dac9a4 172 SUPERFAMILY SSF46767 86 169 4.45E-34 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Y11_09141 62769790893e27bbba9bc82d11dac9a4 172 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 21 167 41.051 T 13-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 Y11_09141 62769790893e27bbba9bc82d11dac9a4 172 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 9 83 6.2E-12 T 13-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Y11_09141 62769790893e27bbba9bc82d11dac9a4 172 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 13-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Y11_09141 62769790893e27bbba9bc82d11dac9a4 172 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 1.7E-34 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Y11_09141 62769790893e27bbba9bc82d11dac9a4 172 SUPERFAMILY SSF53155 7 92 5.89E-6 T 13-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Y11_15441 1b1b92623ba15dc6a2d88d81595d6bdc 692 SUPERFAMILY SSF161098 140 405 3.92E-43 T 13-10-2018 IPR035906 MetI-like superfamily Y11_15441 1b1b92623ba15dc6a2d88d81595d6bdc 692 SUPERFAMILY SSF161098 434 674 3.27E-43 T 13-10-2018 IPR035906 MetI-like superfamily Y11_15441 1b1b92623ba15dc6a2d88d81595d6bdc 692 Gene3D G3DSA:1.10.3720.10 429 688 1.2E-44 T 13-10-2018 IPR035906 MetI-like superfamily Y11_15441 1b1b92623ba15dc6a2d88d81595d6bdc 692 Gene3D G3DSA:1.10.3720.10 139 410 3.3E-51 T 13-10-2018 IPR035906 MetI-like superfamily Y11_15441 1b1b92623ba15dc6a2d88d81595d6bdc 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 209 400 3.8E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_15441 1b1b92623ba15dc6a2d88d81595d6bdc 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 501 677 3.3E-11 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_13661 79bbaf30dcd942d8336fe322a8160fd8 193 SUPERFAMILY SSF46689 2 67 1.15E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_13661 79bbaf30dcd942d8336fe322a8160fd8 193 Pfam PF08362 YcdC-like protein, C-terminal region 47 187 8.5E-55 T 13-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 Y11_13661 79bbaf30dcd942d8336fe322a8160fd8 193 SUPERFAMILY SSF48498 64 187 8.4E-39 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Y11_13661 79bbaf30dcd942d8336fe322a8160fd8 193 Gene3D G3DSA:1.10.10.60 1 46 3.5E-21 T 13-10-2018 Y11_13661 79bbaf30dcd942d8336fe322a8160fd8 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 46 1.1E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Y11_13661 79bbaf30dcd942d8336fe322a8160fd8 193 Gene3D G3DSA:1.10.357.10 47 189 1.1E-50 T 13-10-2018 Y11_11851 80eb5da9fdabb6e0a18423f4876bae82 247 Gene3D G3DSA:3.30.70.980 130 205 5.3E-58 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_11851 80eb5da9fdabb6e0a18423f4876bae82 247 Gene3D G3DSA:3.30.70.980 85 236 5.3E-58 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_11851 80eb5da9fdabb6e0a18423f4876bae82 247 SUPERFAMILY SSF75625 3 245 1.31E-94 T 13-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_11851 80eb5da9fdabb6e0a18423f4876bae82 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 5.4E-103 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_11851 80eb5da9fdabb6e0a18423f4876bae82 247 Pfam PF01709 Transcriptional regulator 5 236 5.8E-91 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_11851 80eb5da9fdabb6e0a18423f4876bae82 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.727 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_11851 80eb5da9fdabb6e0a18423f4876bae82 247 Gene3D G3DSA:1.10.10.200 1 81 4.1E-34 T 13-10-2018 IPR017856 Integrase-like, N-terminal Y11_05041 e52508f56f202c52bab6bb4603fd77fc 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 3 305 52.853 T 13-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 Y11_05041 e52508f56f202c52bab6bb4603fd77fc 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 4 305 4.2E-145 T 13-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 Y11_05041 e52508f56f202c52bab6bb4603fd77fc 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 296 5.6E-104 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Y11_05041 e52508f56f202c52bab6bb4603fd77fc 306 PIRSF PIRSF026649 1 305 5.7E-100 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Y11_14551 43e57e58b52921e69823a1c730804290 214 Gene3D G3DSA:1.10.287.500 35 168 1.7E-51 T 13-10-2018 Y11_14551 43e57e58b52921e69823a1c730804290 214 PIRSF PIRSF002884 1 214 1.3E-88 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 Y11_14551 43e57e58b52921e69823a1c730804290 214 SUPERFAMILY SSF75708 13 213 1.7E-66 T 13-10-2018 Y11_14551 43e57e58b52921e69823a1c730804290 214 Pfam PF04344 Chemotaxis phosphatase, CheZ 16 214 5.9E-77 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 Y11_14551 43e57e58b52921e69823a1c730804290 214 Gene3D G3DSA:1.20.5.590 6 34 5.7E-11 T 13-10-2018 Y11_10911 c4f782c5d6fe90c77e6dbb6f534f5c8b 240 Gene3D G3DSA:3.20.20.450 2 231 6.2E-44 T 13-10-2018 IPR035919 EAL domain superfamily Y11_10911 c4f782c5d6fe90c77e6dbb6f534f5c8b 240 Pfam PF00563 EAL domain 16 220 5.3E-18 T 13-10-2018 IPR001633 EAL domain Y11_10911 c4f782c5d6fe90c77e6dbb6f534f5c8b 240 SMART SM00052 3 228 5.9E-5 T 13-10-2018 IPR001633 EAL domain Y11_10911 c4f782c5d6fe90c77e6dbb6f534f5c8b 240 SUPERFAMILY SSF141868 16 221 4.05E-24 T 13-10-2018 IPR035919 EAL domain superfamily Y11_32531 1cbc61f33eeb8b2ad0f1c3a7046451db 321 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 320 2.1E-132 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Y11_32531 1cbc61f33eeb8b2ad0f1c3a7046451db 321 SUPERFAMILY SSF53383 17 320 8.53E-110 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_32531 1cbc61f33eeb8b2ad0f1c3a7046451db 321 Gene3D G3DSA:3.90.1150.10 29 321 2.9E-131 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_32531 1cbc61f33eeb8b2ad0f1c3a7046451db 321 Pfam PF00202 Aminotransferase class-III 24 321 3.4E-113 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Y11_32531 1cbc61f33eeb8b2ad0f1c3a7046451db 321 Gene3D G3DSA:3.40.640.10 59 304 2.9E-131 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_32531 1cbc61f33eeb8b2ad0f1c3a7046451db 321 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Y11_17501 467862475de44928729a0f0d1e1e096c 247 SMART SM00062 26 245 7.6E-71 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_17501 467862475de44928729a0f0d1e1e096c 247 Gene3D G3DSA:3.40.190.10 110 205 4.5E-84 T 13-10-2018 Y11_17501 467862475de44928729a0f0d1e1e096c 247 SMART SM00079 26 244 2.7E-7 T 13-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Y11_17501 467862475de44928729a0f0d1e1e096c 247 Gene3D G3DSA:3.40.190.10 35 242 4.5E-84 T 13-10-2018 Y11_17501 467862475de44928729a0f0d1e1e096c 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 243 1.1E-67 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_17501 467862475de44928729a0f0d1e1e096c 247 SUPERFAMILY SSF53850 8 244 4.35E-74 T 13-10-2018 Y11_17501 467862475de44928729a0f0d1e1e096c 247 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site Y11_22801 8af010456c425c41b9533b675c316ae7 252 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 26 247 3.0E-84 T 13-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Y11_22801 8af010456c425c41b9533b675c316ae7 252 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 28 245 4.8E-75 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Y11_22801 8af010456c425c41b9533b675c316ae7 252 SUPERFAMILY SSF53448 26 246 2.82E-59 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_22801 8af010456c425c41b9533b675c316ae7 252 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 25 245 42.891 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Y11_22801 8af010456c425c41b9533b675c316ae7 252 Gene3D G3DSA:3.90.550.10 22 250 2.4E-76 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_22801 8af010456c425c41b9533b675c316ae7 252 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 120 127 - T 13-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Y11_04831 3e1f58af57c635be5f5e0a9e7b6dd277 321 Pfam PF03916 Polysulphide reductase, NrfD 7 320 1.4E-87 T 13-10-2018 IPR005614 NrfD family Y11_04831 3e1f58af57c635be5f5e0a9e7b6dd277 321 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 8 321 3.3E-133 T 13-10-2018 IPR017566 NrfD Y11_04831 3e1f58af57c635be5f5e0a9e7b6dd277 321 Gene3D G3DSA:1.20.1630.10 6 241 1.5E-14 T 13-10-2018 Y11_38591 8dbdadb39708826e5b6e61f53c7a3d6a 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 31.663 T 13-10-2018 IPR023065 Uncharacterised protein family ApaG Y11_38591 8dbdadb39708826e5b6e61f53c7a3d6a 125 SUPERFAMILY SSF110069 5 125 3.4E-47 T 13-10-2018 IPR036767 ApaG domain superfamily Y11_38591 8dbdadb39708826e5b6e61f53c7a3d6a 125 Pfam PF04379 ApaG domain 18 102 1.2E-33 T 13-10-2018 IPR007474 ApaG domain Y11_38591 8dbdadb39708826e5b6e61f53c7a3d6a 125 Gene3D G3DSA:2.60.40.1470 1 125 3.6E-45 T 13-10-2018 IPR036767 ApaG domain superfamily Y11_23141 7354f2abdb0ea9473abb4a6700a05c33 387 Gene3D G3DSA:3.40.50.1260 165 373 1.2E-154 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23141 7354f2abdb0ea9473abb4a6700a05c33 387 SUPERFAMILY SSF53748 3 383 3.18E-144 T 13-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23141 7354f2abdb0ea9473abb4a6700a05c33 387 PIRSF PIRSF000724 1 387 3.0E-133 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23141 7354f2abdb0ea9473abb4a6700a05c33 387 Pfam PF00162 Phosphoglycerate kinase 6 373 9.7E-139 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23141 7354f2abdb0ea9473abb4a6700a05c33 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.149 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23141 7354f2abdb0ea9473abb4a6700a05c33 387 Gene3D G3DSA:3.40.50.1260 10 378 1.2E-154 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23141 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23141 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23141 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23141 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23141 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23141 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23141 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23141 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23141 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_23141 7354f2abdb0ea9473abb4a6700a05c33 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 13-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_42631 69d3e02e437e4d3243249cea7d40e114 417 Gene3D G3DSA:3.90.1150.10 10 395 5.4E-183 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_42631 69d3e02e437e4d3243249cea7d40e114 417 Gene3D G3DSA:3.40.640.10 37 289 5.4E-183 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_42631 69d3e02e437e4d3243249cea7d40e114 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 13-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Y11_42631 69d3e02e437e4d3243249cea7d40e114 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 1.7E-185 T 13-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Y11_42631 69d3e02e437e4d3243249cea7d40e114 417 SUPERFAMILY SSF53383 6 416 2.06E-181 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_42631 69d3e02e437e4d3243249cea7d40e114 417 PIRSF PIRSF000412 1 417 6.6E-171 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Y11_42631 69d3e02e437e4d3243249cea7d40e114 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.455 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Y11_23891 f5b5bd558b8d1c2d6b104f70822cb441 389 Gene3D G3DSA:2.40.420.20 291 381 5.0E-22 T 13-10-2018 Y11_23891 f5b5bd558b8d1c2d6b104f70822cb441 389 SUPERFAMILY SSF111369 55 303 1.7E-57 T 13-10-2018 Y11_23891 f5b5bd558b8d1c2d6b104f70822cb441 389 Gene3D G3DSA:2.40.30.170 58 290 6.4E-68 T 13-10-2018 Y11_23891 f5b5bd558b8d1c2d6b104f70822cb441 389 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 380 2.1E-75 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Y11_23891 f5b5bd558b8d1c2d6b104f70822cb441 389 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 296 1.3E-11 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Y11_23891 f5b5bd558b8d1c2d6b104f70822cb441 389 Gene3D G3DSA:1.10.287.470 99 172 6.4E-68 T 13-10-2018 Y11_23891 f5b5bd558b8d1c2d6b104f70822cb441 389 Gene3D G3DSA:2.40.50.100 64 207 6.4E-68 T 13-10-2018 Y11_39961 8643921ed7f693beb00acc9431c8f1cf 227 Pfam PF03006 Haemolysin-III related 23 220 5.1E-37 T 13-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 Y11_39961 8643921ed7f693beb00acc9431c8f1cf 227 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 26 227 2.4E-71 T 13-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 Y11_01731 d45020d8b5b19156958f0b965ea39b0d 347 Pfam PF00892 EamA-like transporter family 176 327 2.1E-13 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_01731 d45020d8b5b19156958f0b965ea39b0d 347 Pfam PF00892 EamA-like transporter family 28 162 1.3E-17 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_01731 d45020d8b5b19156958f0b965ea39b0d 347 SUPERFAMILY SSF103481 67 162 1.57E-10 T 13-10-2018 Y11_01731 d45020d8b5b19156958f0b965ea39b0d 347 SUPERFAMILY SSF103481 244 331 1.31E-15 T 13-10-2018 Y11_24241 fa1bddabf14f956165b9b3d25fcdaef6 456 SUPERFAMILY SSF64518 130 455 7.19E-14 T 13-10-2018 Y11_24241 fa1bddabf14f956165b9b3d25fcdaef6 456 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 414 452 2.9E-5 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Y11_24241 fa1bddabf14f956165b9b3d25fcdaef6 456 Pfam PF00460 Flagella basal body rod protein 6 33 3.0E-5 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Y11_24241 fa1bddabf14f956165b9b3d25fcdaef6 456 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 452 1.9E-92 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_24241 fa1bddabf14f956165b9b3d25fcdaef6 456 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 1.0E-11 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_24241 fa1bddabf14f956165b9b3d25fcdaef6 456 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 1.0E-11 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_24241 fa1bddabf14f956165b9b3d25fcdaef6 456 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 1.0E-11 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_24241 fa1bddabf14f956165b9b3d25fcdaef6 456 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 1.0E-11 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_24241 fa1bddabf14f956165b9b3d25fcdaef6 456 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 1.0E-11 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Y11_20061 722c115347632fda990192d2e8eceec4 656 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 1.2E-133 T 13-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Y11_20061 722c115347632fda990192d2e8eceec4 656 Gene3D G3DSA:1.20.272.10 242 363 9.1E-44 T 13-10-2018 Y11_20061 722c115347632fda990192d2e8eceec4 656 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 512 653 7.1E-59 T 13-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_20061 722c115347632fda990192d2e8eceec4 656 Gene3D G3DSA:3.40.50.300 13 177 6.2E-103 T 13-10-2018 Y11_20061 722c115347632fda990192d2e8eceec4 656 SMART SM00382 37 179 1.6E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_20061 722c115347632fda990192d2e8eceec4 656 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.9E-5 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Y11_20061 722c115347632fda990192d2e8eceec4 656 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.9E-5 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Y11_20061 722c115347632fda990192d2e8eceec4 656 SUPERFAMILY SSF48019 243 367 2.72E-35 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Y11_20061 722c115347632fda990192d2e8eceec4 656 Pfam PF13177 DNA polymerase III, delta subunit 20 177 7.6E-42 T 13-10-2018 Y11_20061 722c115347632fda990192d2e8eceec4 656 Gene3D G3DSA:3.30.300.150 510 638 7.1E-45 T 13-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_20061 722c115347632fda990192d2e8eceec4 656 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 363 6.1E-33 T 13-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 Y11_20061 722c115347632fda990192d2e8eceec4 656 Gene3D G3DSA:1.10.8.60 8 240 6.2E-103 T 13-10-2018 Y11_20061 722c115347632fda990192d2e8eceec4 656 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 430 510 3.3E-22 T 13-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_20061 722c115347632fda990192d2e8eceec4 656 SUPERFAMILY SSF52540 35 221 2.33E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_33651 31e2a36f19af729590f22a51241f994c 108 SUPERFAMILY SSF52833 2 107 3.19E-41 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_33651 31e2a36f19af729590f22a51241f994c 108 PIRSF PIRSF000077 2 108 2.9E-44 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Y11_33651 31e2a36f19af729590f22a51241f994c 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Y11_33651 31e2a36f19af729590f22a51241f994c 108 PRINTS PR00421 Thioredoxin family signature 24 32 6.1E-10 T 13-10-2018 Y11_33651 31e2a36f19af729590f22a51241f994c 108 PRINTS PR00421 Thioredoxin family signature 72 83 6.1E-10 T 13-10-2018 Y11_33651 31e2a36f19af729590f22a51241f994c 108 PRINTS PR00421 Thioredoxin family signature 32 41 6.1E-10 T 13-10-2018 Y11_33651 31e2a36f19af729590f22a51241f994c 108 Gene3D G3DSA:3.40.30.10 1 108 1.3E-37 T 13-10-2018 Y11_33651 31e2a36f19af729590f22a51241f994c 108 Pfam PF00085 Thioredoxin 5 106 1.4E-33 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 Y11_33651 31e2a36f19af729590f22a51241f994c 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 6.8E-39 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Y11_09001 244e95384180d965217fea0725f11ff1 280 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 218 229 - T 13-10-2018 IPR033116 Serine proteases, trypsin family, serine active site Y11_09001 244e95384180d965217fea0725f11ff1 280 Gene3D G3DSA:2.40.10.10 55 162 4.2E-28 T 13-10-2018 Y11_09001 244e95384180d965217fea0725f11ff1 280 Pfam PF00089 Trypsin 50 244 2.2E-14 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Y11_09001 244e95384180d965217fea0725f11ff1 280 Gene3D G3DSA:2.40.10.10 40 243 4.2E-28 T 13-10-2018 Y11_09001 244e95384180d965217fea0725f11ff1 280 SMART SM00020 47 254 0.0013 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Y11_09001 244e95384180d965217fea0725f11ff1 280 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 81 86 - T 13-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 Y11_09001 244e95384180d965217fea0725f11ff1 280 SUPERFAMILY SSF50494 7 270 3.25E-30 T 13-10-2018 IPR009003 Peptidase S1, PA clan Y11_09001 244e95384180d965217fea0725f11ff1 280 PRINTS PR00839 V8 serine protease family signature 233 245 1.6E-17 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 Y11_09001 244e95384180d965217fea0725f11ff1 280 PRINTS PR00839 V8 serine protease family signature 70 87 1.6E-17 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 Y11_09001 244e95384180d965217fea0725f11ff1 280 PRINTS PR00839 V8 serine protease family signature 179 192 1.6E-17 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 Y11_09001 244e95384180d965217fea0725f11ff1 280 PRINTS PR00839 V8 serine protease family signature 45 62 1.6E-17 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 Y11_09001 244e95384180d965217fea0725f11ff1 280 PRINTS PR00839 V8 serine protease family signature 213 229 1.6E-17 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 Y11_09921 625b9d707379b9f7d4aff45641621ec3 309 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 308 7.2E-162 T 13-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 Y11_09921 625b9d707379b9f7d4aff45641621ec3 309 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 44.835 T 13-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 Y11_09921 625b9d707379b9f7d4aff45641621ec3 309 Gene3D G3DSA:3.30.54.10 174 306 4.4E-120 T 13-10-2018 Y11_09921 625b9d707379b9f7d4aff45641621ec3 309 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 4.5E-139 T 13-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 Y11_09921 625b9d707379b9f7d4aff45641621ec3 309 SUPERFAMILY SSF56596 5 308 1.02E-119 T 13-10-2018 IPR036384 Replication terminator Tus superfamily GO:0003677|GO:0005737|GO:0006274 Y11_09921 625b9d707379b9f7d4aff45641621ec3 309 Gene3D G3DSA:3.50.14.10 14 281 4.4E-120 T 13-10-2018 IPR036381 Replication terminator Tus, domain 1 GO:0003677|GO:0005737|GO:0006274 Y11_36001 8fcf84523aeedda7703845e667528296 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 56.554 T 13-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 Y11_36001 8fcf84523aeedda7703845e667528296 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 4.5E-6 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Y11_36001 8fcf84523aeedda7703845e667528296 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 4.5E-6 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Y11_36001 8fcf84523aeedda7703845e667528296 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 1.2E-129 T 13-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 Y11_36001 8fcf84523aeedda7703845e667528296 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 14 321 6.3E-46 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_36001 8fcf84523aeedda7703845e667528296 325 SUPERFAMILY SSF55681 13 322 1.51E-83 T 13-10-2018 Y11_36001 8fcf84523aeedda7703845e667528296 325 Gene3D G3DSA:3.30.930.10 1 325 5.9E-123 T 13-10-2018 Y11_19671 46a79d2e1a5668bc1d5c82fba36a041c 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 6.1E-30 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Y11_19671 46a79d2e1a5668bc1d5c82fba36a041c 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 6.1E-30 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Y11_19671 46a79d2e1a5668bc1d5c82fba36a041c 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 6.1E-30 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Y11_19671 46a79d2e1a5668bc1d5c82fba36a041c 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 6.1E-30 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Y11_19671 46a79d2e1a5668bc1d5c82fba36a041c 461 SMART SM00840 341 402 2.2E-27 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Y11_19671 46a79d2e1a5668bc1d5c82fba36a041c 461 Pfam PF09190 DALR domain 341 402 2.3E-24 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Y11_19671 46a79d2e1a5668bc1d5c82fba36a041c 461 SUPERFAMILY SSF52374 1 313 2.23E-101 T 13-10-2018 Y11_19671 46a79d2e1a5668bc1d5c82fba36a041c 461 SUPERFAMILY SSF47323 316 460 1.2E-42 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_19671 46a79d2e1a5668bc1d5c82fba36a041c 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.148 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Y11_19671 46a79d2e1a5668bc1d5c82fba36a041c 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 8.7E-192 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Y11_19671 46a79d2e1a5668bc1d5c82fba36a041c 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 8.9E-142 T 13-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Y11_19671 46a79d2e1a5668bc1d5c82fba36a041c 461 Gene3D G3DSA:3.40.50.620 1 305 4.5E-133 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_19671 46a79d2e1a5668bc1d5c82fba36a041c 461 Gene3D G3DSA:1.20.120.640 306 461 4.3E-56 T 13-10-2018 Y11_23951 b39408b0893a17e64908278808f35098 338 Pfam PF02769 AIR synthase related protein, C-terminal domain 167 314 1.1E-27 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Y11_23951 b39408b0893a17e64908278808f35098 338 Gene3D G3DSA:3.30.1330.10 7 160 3.1E-57 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Y11_23951 b39408b0893a17e64908278808f35098 338 Pfam PF00586 AIR synthase related protein, N-terminal domain 55 155 4.1E-17 T 13-10-2018 IPR016188 PurM-like, N-terminal domain Y11_23951 b39408b0893a17e64908278808f35098 338 SUPERFAMILY SSF56042 165 333 7.63E-43 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Y11_23951 b39408b0893a17e64908278808f35098 338 Gene3D G3DSA:3.90.650.10 161 338 1.8E-54 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Y11_23951 b39408b0893a17e64908278808f35098 338 SUPERFAMILY SSF55326 5 158 1.29E-33 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Y11_23951 b39408b0893a17e64908278808f35098 338 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 6 338 1.4E-138 T 13-10-2018 IPR011854 Carbamoyl dehydratase HypE Y11_23951 b39408b0893a17e64908278808f35098 338 PIRSF PIRSF005644 1 338 4.5E-125 T 13-10-2018 IPR011854 Carbamoyl dehydratase HypE Y11_02771 6551508d79a58ff1b225b2777ba7886f 508 Pfam PF13347 MFS/sugar transport protein 13 444 1.0E-48 T 13-10-2018 Y11_02771 6551508d79a58ff1b225b2777ba7886f 508 SUPERFAMILY SSF103473 8 448 8.11E-30 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_02771 6551508d79a58ff1b225b2777ba7886f 508 Gene3D G3DSA:1.20.1250.20 3 440 2.5E-14 T 13-10-2018 Y11_36521 e46a356fa878998da1b74e2bcad66d82 311 PIRSF PIRSF000102 1 310 1.2E-59 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Y11_36521 e46a356fa878998da1b74e2bcad66d82 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 1.9E-50 T 13-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 Y11_36521 e46a356fa878998da1b74e2bcad66d82 311 SUPERFAMILY SSF51735 1 145 1.73E-39 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_36521 e46a356fa878998da1b74e2bcad66d82 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.6E-45 T 13-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 Y11_36521 e46a356fa878998da1b74e2bcad66d82 311 Gene3D G3DSA:3.40.50.720 1 146 5.2E-64 T 13-10-2018 Y11_36521 e46a356fa878998da1b74e2bcad66d82 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 5.8E-136 T 13-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 Y11_36521 e46a356fa878998da1b74e2bcad66d82 311 SUPERFAMILY SSF56327 146 310 2.78E-41 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Y11_36521 e46a356fa878998da1b74e2bcad66d82 311 Gene3D G3DSA:3.90.110.10 147 311 1.8E-54 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Y11_36521 e46a356fa878998da1b74e2bcad66d82 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 13-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Y11_36521 e46a356fa878998da1b74e2bcad66d82 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 59.495 T 13-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 Y11_17761 d7b2e2900f3fa002700c0ed51f4e84f9 243 Pfam PF00487 Fatty acid desaturase 9 182 2.2E-20 T 13-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 Y11_02231 f989dbc78ee31675fba1bd6250a9a3f9 181 Gene3D G3DSA:1.20.120.1200 1 159 7.3E-48 T 13-10-2018 Y11_02231 f989dbc78ee31675fba1bd6250a9a3f9 181 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 157 8.1E-34 T 13-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_41141 7c9439dc336685402ac35f119fa54e55 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 4.8E-7 T 13-10-2018 IPR001451 Hexapeptide repeat Y11_41141 7c9439dc336685402ac35f119fa54e55 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 7.4E-10 T 13-10-2018 IPR001451 Hexapeptide repeat Y11_41141 7c9439dc336685402ac35f119fa54e55 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Y11_41141 7c9439dc336685402ac35f119fa54e55 262 PIRSF PIRSF000456 4 262 1.1E-106 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Y11_41141 7c9439dc336685402ac35f119fa54e55 262 SUPERFAMILY SSF51161 2 262 2.64E-77 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Y11_41141 7c9439dc336685402ac35f119fa54e55 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 47.879 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Y11_41141 7c9439dc336685402ac35f119fa54e55 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.0E-108 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Y11_41141 7c9439dc336685402ac35f119fa54e55 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Y11_41141 7c9439dc336685402ac35f119fa54e55 262 Gene3D G3DSA:1.20.1180.10 197 262 8.7E-28 T 13-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 Y11_41141 7c9439dc336685402ac35f119fa54e55 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 9.2E-30 T 13-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 Y11_41141 7c9439dc336685402ac35f119fa54e55 262 Gene3D G3DSA:2.160.10.10 1 196 4.8E-52 T 13-10-2018 Y11_40061 6d992e37f5833457c7b0094128c3e021 172 Gene3D G3DSA:3.40.50.360 1 171 4.9E-48 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_40061 6d992e37f5833457c7b0094128c3e021 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 3.0E-72 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 Y11_40061 6d992e37f5833457c7b0094128c3e021 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 13-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Y11_40061 6d992e37f5833457c7b0094128c3e021 172 SUPERFAMILY SSF52218 1 168 2.64E-46 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_40061 6d992e37f5833457c7b0094128c3e021 172 Pfam PF00258 Flavodoxin 5 160 4.5E-27 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Y11_40061 6d992e37f5833457c7b0094128c3e021 172 PIRSF PIRSF038996 1 170 1.4E-54 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 Y11_28191 cbb8f6362bb9d570a60ceb4b0eb8ad87 342 Gene3D G3DSA:1.10.260.40 1 67 5.7E-24 T 13-10-2018 Y11_28191 cbb8f6362bb9d570a60ceb4b0eb8ad87 342 SUPERFAMILY SSF47413 8 67 8.16E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_28191 cbb8f6362bb9d570a60ceb4b0eb8ad87 342 Pfam PF13377 Periplasmic binding protein-like domain 176 337 2.4E-43 T 13-10-2018 Y11_28191 cbb8f6362bb9d570a60ceb4b0eb8ad87 342 SUPERFAMILY SSF53822 68 340 1.72E-94 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_28191 cbb8f6362bb9d570a60ceb4b0eb8ad87 342 SMART SM00354 9 79 2.5E-27 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_28191 cbb8f6362bb9d570a60ceb4b0eb8ad87 342 Gene3D G3DSA:3.40.50.2300 168 297 1.5E-85 T 13-10-2018 Y11_28191 cbb8f6362bb9d570a60ceb4b0eb8ad87 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 55 1.6E-17 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_28191 cbb8f6362bb9d570a60ceb4b0eb8ad87 342 Gene3D G3DSA:3.40.50.2300 71 315 1.5E-85 T 13-10-2018 Y11_28191 cbb8f6362bb9d570a60ceb4b0eb8ad87 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 13-10-2018 Y11_11711 0939840cd318fb8b6bed459efc6e8a70 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 1.0E-85 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Y11_11711 0939840cd318fb8b6bed459efc6e8a70 213 Pfam PF01081 KDPG and KHG aldolase 9 203 7.4E-91 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Y11_11711 0939840cd318fb8b6bed459efc6e8a70 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 13-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Y11_11711 0939840cd318fb8b6bed459efc6e8a70 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 13-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Y11_11711 0939840cd318fb8b6bed459efc6e8a70 213 Gene3D G3DSA:3.20.20.70 1 211 8.8E-75 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_11711 0939840cd318fb8b6bed459efc6e8a70 213 SUPERFAMILY SSF51569 4 209 7.87E-70 T 13-10-2018 Y11_03841 fe129eba66b9faa844052a9fe4a68908 368 SUPERFAMILY SSF63380 45 138 1.6E-19 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Y11_03841 fe129eba66b9faa844052a9fe4a68908 368 Gene3D G3DSA:3.40.50.80 140 280 7.2E-28 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Y11_03841 fe129eba66b9faa844052a9fe4a68908 368 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 295 360 6.5E-13 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Y11_03841 fe129eba66b9faa844052a9fe4a68908 368 Gene3D G3DSA:2.40.30.10 39 136 6.3E-18 T 13-10-2018 Y11_03841 fe129eba66b9faa844052a9fe4a68908 368 SUPERFAMILY SSF52343 144 272 8.25E-31 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Y11_03841 fe129eba66b9faa844052a9fe4a68908 368 Pfam PF00970 Oxidoreductase FAD-binding domain 70 138 1.0E-7 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Y11_03841 fe129eba66b9faa844052a9fe4a68908 368 SUPERFAMILY SSF54292 263 366 6.82E-24 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Y11_03841 fe129eba66b9faa844052a9fe4a68908 368 Gene3D G3DSA:3.10.20.30 284 368 7.9E-21 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Y11_03841 fe129eba66b9faa844052a9fe4a68908 368 PRINTS PR00410 Phenol hydroxylase reductase family signature 240 248 2.5E-6 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Y11_03841 fe129eba66b9faa844052a9fe4a68908 368 PRINTS PR00410 Phenol hydroxylase reductase family signature 71 83 2.5E-6 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Y11_03841 fe129eba66b9faa844052a9fe4a68908 368 PRINTS PR00410 Phenol hydroxylase reductase family signature 149 168 2.5E-6 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Y11_03841 fe129eba66b9faa844052a9fe4a68908 368 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 319 327 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Y11_03841 fe129eba66b9faa844052a9fe4a68908 368 Pfam PF00175 Oxidoreductase NAD-binding domain 150 253 4.3E-15 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Y11_36881 f6547f76e2099bbd0c49d2873b48a2d3 438 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 429 1.7E-142 T 13-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 Y11_36881 f6547f76e2099bbd0c49d2873b48a2d3 438 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 36.481 T 13-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 Y11_36881 f6547f76e2099bbd0c49d2873b48a2d3 438 PIRSF PIRSF006060 1 436 1.6E-48 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_36881 f6547f76e2099bbd0c49d2873b48a2d3 438 Pfam PF13520 Amino acid permease 9 415 4.0E-48 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_36881 f6547f76e2099bbd0c49d2873b48a2d3 438 Gene3D G3DSA:1.20.1740.10 1 436 2.2E-57 T 13-10-2018 Y11_36881 f6547f76e2099bbd0c49d2873b48a2d3 438 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 5 432 1.5E-241 T 13-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 Y11_33531 2baddf50a8b34da8e386115ade607e32 84 SUPERFAMILY SSF47345 3 84 9.42E-30 T 13-10-2018 IPR035900 Colicin E immunity protein superfamily Y11_33531 2baddf50a8b34da8e386115ade607e32 84 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 3 83 3.1E-34 T 13-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 Y11_33531 2baddf50a8b34da8e386115ade607e32 84 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 8 83 1.0E-22 T 13-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 Y11_33531 2baddf50a8b34da8e386115ade607e32 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 39 55 5.9E-23 T 13-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 Y11_33531 2baddf50a8b34da8e386115ade607e32 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 3 21 5.9E-23 T 13-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 Y11_33531 2baddf50a8b34da8e386115ade607e32 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 62 83 5.9E-23 T 13-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 Y11_33531 2baddf50a8b34da8e386115ade607e32 84 Gene3D G3DSA:1.10.1200.20 3 84 6.6E-32 T 13-10-2018 IPR035900 Colicin E immunity protein superfamily Y11_10791 95d2a333334e7c860c0b8373c23b38d7 396 Gene3D G3DSA:3.40.50.1100 53 383 1.7E-180 T 13-10-2018 Y11_10791 95d2a333334e7c860c0b8373c23b38d7 396 PIRSF PIRSF001413 1 396 9.5E-169 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Y11_10791 95d2a333334e7c860c0b8373c23b38d7 396 Gene3D G3DSA:3.40.50.1100 9 204 1.7E-180 T 13-10-2018 Y11_10791 95d2a333334e7c860c0b8373c23b38d7 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 13-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Y11_10791 95d2a333334e7c860c0b8373c23b38d7 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 376 3.7E-48 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Y11_10791 95d2a333334e7c860c0b8373c23b38d7 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 388 1.1E-188 T 13-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Y11_10791 95d2a333334e7c860c0b8373c23b38d7 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.19 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Y11_10791 95d2a333334e7c860c0b8373c23b38d7 396 SUPERFAMILY SSF53686 4 389 5.24E-141 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y11_05371 9a4bf722d7e536b5f412597e1a7b6698 305 Gene3D G3DSA:2.40.70.10 29 174 6.2E-8 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily Y11_05371 9a4bf722d7e536b5f412597e1a7b6698 305 SUPERFAMILY SSF50630 176 293 9.38E-8 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily Y11_05371 9a4bf722d7e536b5f412597e1a7b6698 305 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 206 217 - T 13-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 Y11_05371 9a4bf722d7e536b5f412597e1a7b6698 305 Gene3D G3DSA:2.40.70.10 193 304 1.0E-8 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily Y11_10221 471873b0376e64791e90e1ed03e8d4fd 207 SUPERFAMILY SSF54862 38 176 7.44E-30 T 13-10-2018 Y11_10221 471873b0376e64791e90e1ed03e8d4fd 207 Pfam PF14697 4Fe-4S dicluster domain 110 164 2.0E-17 T 13-10-2018 Y11_10221 471873b0376e64791e90e1ed03e8d4fd 207 Gene3D G3DSA:3.30.70.20 140 183 6.9E-7 T 13-10-2018 Y11_10221 471873b0376e64791e90e1ed03e8d4fd 207 Gene3D G3DSA:3.20.20.20 37 100 1.2E-12 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_10221 471873b0376e64791e90e1ed03e8d4fd 207 Gene3D G3DSA:3.30.70.20 101 139 3.2E-7 T 13-10-2018 Y11_10221 471873b0376e64791e90e1ed03e8d4fd 207 PIRSF PIRSF005784 3 190 1.9E-85 T 13-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 Y11_10221 471873b0376e64791e90e1ed03e8d4fd 207 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_10221 471873b0376e64791e90e1ed03e8d4fd 207 Pfam PF04060 Putative Fe-S cluster 44 76 1.8E-14 T 13-10-2018 IPR007202 4Fe-4S domain GO:0051536 Y11_10221 471873b0376e64791e90e1ed03e8d4fd 207 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 169 25.435 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Y11_10221 471873b0376e64791e90e1ed03e8d4fd 207 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 187 7.9E-85 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Y11_04801 9f5b6adadbe298a68eb2f7abdb8089e1 509 Gene3D G3DSA:1.10.1130.10 73 503 7.1E-186 T 13-10-2018 Y11_04801 9f5b6adadbe298a68eb2f7abdb8089e1 509 Hamap MF_01182 Cytochrome c-552 [nrfA]. 37 508 56.061 T 13-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 Y11_04801 9f5b6adadbe298a68eb2f7abdb8089e1 509 PIRSF PIRSF000243 64 509 4.4E-120 T 13-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 Y11_04801 9f5b6adadbe298a68eb2f7abdb8089e1 509 Gene3D G3DSA:1.20.140.10 342 484 7.1E-186 T 13-10-2018 Y11_04801 9f5b6adadbe298a68eb2f7abdb8089e1 509 Pfam PF02335 Cytochrome c552 74 503 2.2E-171 T 13-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 Y11_04801 9f5b6adadbe298a68eb2f7abdb8089e1 509 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 69 505 2.5E-239 T 13-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 Y11_04801 9f5b6adadbe298a68eb2f7abdb8089e1 509 SUPERFAMILY SSF48695 67 503 6.74E-159 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Y11_37011 aeff575fcb53500ebbcbd93628b7530f 209 SMART SM00859 3 95 0.0023 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Y11_37011 aeff575fcb53500ebbcbd93628b7530f 209 Gene3D G3DSA:3.40.50.720 1 209 4.4E-51 T 13-10-2018 Y11_37011 aeff575fcb53500ebbcbd93628b7530f 209 SUPERFAMILY SSF51735 1 199 2.53E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_18581 bc3c6204acd10fc8d720ff95120f3fc7 388 SUPERFAMILY SSF52210 239 385 5.1E-53 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Y11_18581 bc3c6204acd10fc8d720ff95120f3fc7 388 Pfam PF00549 CoA-ligase 262 382 4.4E-24 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Y11_18581 bc3c6204acd10fc8d720ff95120f3fc7 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 13-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Y11_18581 bc3c6204acd10fc8d720ff95120f3fc7 388 Gene3D G3DSA:3.30.470.20 1 234 9.8E-98 T 13-10-2018 Y11_18581 bc3c6204acd10fc8d720ff95120f3fc7 388 Pfam PF08442 ATP-grasp domain 2 203 3.1E-83 T 13-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Y11_18581 bc3c6204acd10fc8d720ff95120f3fc7 388 Gene3D G3DSA:3.30.1490.20 21 104 9.8E-98 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Y11_18581 bc3c6204acd10fc8d720ff95120f3fc7 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 384 3.9E-182 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Y11_18581 bc3c6204acd10fc8d720ff95120f3fc7 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.42 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Y11_18581 bc3c6204acd10fc8d720ff95120f3fc7 388 Gene3D G3DSA:3.40.50.261 240 387 1.4E-55 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Y11_18581 bc3c6204acd10fc8d720ff95120f3fc7 388 SUPERFAMILY SSF56059 1 238 6.36E-81 T 13-10-2018 Y11_18581 bc3c6204acd10fc8d720ff95120f3fc7 388 PIRSF PIRSF001554 1 388 3.4E-155 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Y11_10561 6e8a60ae0d3ea310509b8b0703e06f72 389 Gene3D G3DSA:1.25.40.10 179 345 7.3E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_10561 6e8a60ae0d3ea310509b8b0703e06f72 389 Pfam PF13432 Tetratricopeptide repeat 185 243 0.0047 T 13-10-2018 Y11_10561 6e8a60ae0d3ea310509b8b0703e06f72 389 SUPERFAMILY SSF48452 37 132 2.81E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_10561 6e8a60ae0d3ea310509b8b0703e06f72 389 SMART SM00028 69 102 64.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_10561 6e8a60ae0d3ea310509b8b0703e06f72 389 SMART SM00028 107 140 140.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_10561 6e8a60ae0d3ea310509b8b0703e06f72 389 SMART SM00028 214 247 1.9 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_10561 6e8a60ae0d3ea310509b8b0703e06f72 389 SMART SM00028 180 213 27.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_10561 6e8a60ae0d3ea310509b8b0703e06f72 389 SUPERFAMILY SSF48452 109 279 6.07E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_10561 6e8a60ae0d3ea310509b8b0703e06f72 389 Gene3D G3DSA:1.25.40.10 39 178 4.3E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_10561 6e8a60ae0d3ea310509b8b0703e06f72 389 Pfam PF13176 Tetratricopeptide repeat 71 97 0.028 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Y11_10561 6e8a60ae0d3ea310509b8b0703e06f72 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.844 T 13-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 Y11_31611 69779da46caac67a89a6a8a1fbdfd5f6 196 Gene3D G3DSA:3.40.50.300 6 196 6.2E-69 T 13-10-2018 Y11_31611 69779da46caac67a89a6a8a1fbdfd5f6 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 27 196 9.0E-73 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Y11_31611 69779da46caac67a89a6a8a1fbdfd5f6 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 29 196 1.4E-58 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Y11_31611 69779da46caac67a89a6a8a1fbdfd5f6 196 PIRSF PIRSF015617 1 196 8.1E-66 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Y11_31611 69779da46caac67a89a6a8a1fbdfd5f6 196 SUPERFAMILY SSF52540 7 196 2.74E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_29951 002b46552f624ef7ea648744e1c7785b 634 SMART SM00304 331 385 9.3E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_29951 002b46552f624ef7ea648744e1c7785b 634 SMART SM00283 386 633 6.5E-79 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_29951 002b46552f624ef7ea648744e1c7785b 634 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 484 511 1.7E-53 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_29951 002b46552f624ef7ea648744e1c7785b 634 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 513 542 1.7E-53 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_29951 002b46552f624ef7ea648744e1c7785b 634 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 1.7E-53 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_29951 002b46552f624ef7ea648744e1c7785b 634 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 561 590 1.7E-53 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_29951 002b46552f624ef7ea648744e1c7785b 634 Pfam PF02743 Cache domain 42 292 1.4E-24 T 13-10-2018 IPR033479 Double Cache domain 1 Y11_29951 002b46552f624ef7ea648744e1c7785b 634 SUPERFAMILY SSF58104 353 634 1.1E-71 T 13-10-2018 Y11_29951 002b46552f624ef7ea648744e1c7785b 634 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 445 599 1.4E-50 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_29951 002b46552f624ef7ea648744e1c7785b 634 Gene3D G3DSA:1.10.287.950 331 634 1.7E-83 T 13-10-2018 Y11_29951 002b46552f624ef7ea648744e1c7785b 634 Gene3D G3DSA:3.30.450.20 35 204 8.2E-18 T 13-10-2018 Y11_21741 35e222843e2255483d0e35daf7c17531 128 Pfam PF11533 Protein of unknown function (DUF3225) 6 127 5.5E-61 T 13-10-2018 IPR024507 Protein of unknown function DUF3225 Y11_21741 35e222843e2255483d0e35daf7c17531 128 Gene3D G3DSA:3.10.450.50 1 128 9.0E-50 T 13-10-2018 Y11_21741 35e222843e2255483d0e35daf7c17531 128 SUPERFAMILY SSF54427 5 126 9.64E-40 T 13-10-2018 IPR032710 NTF2-like domain superfamily Y11_12531 3d804d2f454ccd2e6b66fa57efa982f0 133 PIRSF PIRSF005610 1 125 6.4E-28 T 13-10-2018 IPR007360 Invasion gene expression up-regulator, SirB Y11_12531 3d804d2f454ccd2e6b66fa57efa982f0 133 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 126 1.2E-44 T 13-10-2018 IPR007360 Invasion gene expression up-regulator, SirB Y11_04771 0d05cbfa0d19b30c0e2673f9b9e91187 92 Pfam PF00708 Acylphosphatase 8 90 1.8E-25 T 13-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Y11_04771 0d05cbfa0d19b30c0e2673f9b9e91187 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 91 30.2 T 13-10-2018 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Y11_04771 0d05cbfa0d19b30c0e2673f9b9e91187 92 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Y11_04771 0d05cbfa0d19b30c0e2673f9b9e91187 92 PRINTS PR00112 Acylphosphatase signature 26 51 3.3E-5 T 13-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Y11_04771 0d05cbfa0d19b30c0e2673f9b9e91187 92 PRINTS PR00112 Acylphosphatase signature 61 81 3.3E-5 T 13-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Y11_04771 0d05cbfa0d19b30c0e2673f9b9e91187 92 PRINTS PR00112 Acylphosphatase signature 5 20 3.3E-5 T 13-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Y11_04771 0d05cbfa0d19b30c0e2673f9b9e91187 92 Gene3D G3DSA:3.30.70.100 1 91 1.2E-31 T 13-10-2018 Y11_04771 0d05cbfa0d19b30c0e2673f9b9e91187 92 SUPERFAMILY SSF54975 3 92 1.55E-29 T 13-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Y11_04771 0d05cbfa0d19b30c0e2673f9b9e91187 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Y11_31201 26e79cd5d39bcde4e332a16fac027d90 875 Gene3D G3DSA:3.90.550.10 265 486 1.2E-79 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_31201 26e79cd5d39bcde4e332a16fac027d90 875 Pfam PF03552 Cellulose synthase 454 574 3.7E-12 T 13-10-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 Y11_31201 26e79cd5d39bcde4e332a16fac027d90 875 SUPERFAMILY SSF141371 699 786 3.92E-6 T 13-10-2018 Y11_31201 26e79cd5d39bcde4e332a16fac027d90 875 SUPERFAMILY SSF53448 278 553 2.63E-52 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_31201 26e79cd5d39bcde4e332a16fac027d90 875 Pfam PF00535 Glycosyl transferase family 2 281 450 3.2E-33 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Y11_31201 26e79cd5d39bcde4e332a16fac027d90 875 Pfam PF07238 PilZ domain 697 793 5.2E-9 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Y11_31201 26e79cd5d39bcde4e332a16fac027d90 875 PRINTS PR01439 Cellulose synthase subunit A signature 285 304 4.4E-58 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Y11_31201 26e79cd5d39bcde4e332a16fac027d90 875 PRINTS PR01439 Cellulose synthase subunit A signature 527 553 4.4E-58 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Y11_31201 26e79cd5d39bcde4e332a16fac027d90 875 PRINTS PR01439 Cellulose synthase subunit A signature 202 222 4.4E-58 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Y11_31201 26e79cd5d39bcde4e332a16fac027d90 875 PRINTS PR01439 Cellulose synthase subunit A signature 366 390 4.4E-58 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Y11_31201 26e79cd5d39bcde4e332a16fac027d90 875 PRINTS PR01439 Cellulose synthase subunit A signature 230 255 4.4E-58 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Y11_31201 26e79cd5d39bcde4e332a16fac027d90 875 PRINTS PR01439 Cellulose synthase subunit A signature 670 691 4.4E-58 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Y11_31201 26e79cd5d39bcde4e332a16fac027d90 875 PRINTS PR01439 Cellulose synthase subunit A signature 556 575 4.4E-58 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Y11_31201 26e79cd5d39bcde4e332a16fac027d90 875 PRINTS PR01439 Cellulose synthase subunit A signature 596 615 4.4E-58 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Y11_31201 26e79cd5d39bcde4e332a16fac027d90 875 Gene3D G3DSA:2.40.10.220 693 802 1.7E-12 T 13-10-2018 Y11_31201 26e79cd5d39bcde4e332a16fac027d90 875 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 150 832 5.1E-288 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Y11_11501 1c6b4cbd515395c3b4a69b171f710dbc 67 Gene3D G3DSA:1.20.1180.10 13 67 3.8E-9 T 13-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 Y11_00081 6f4286dc9572a8e44cdb5b13441d86bf 352 PIRSF PIRSF026343 9 346 8.2E-111 T 13-10-2018 IPR014524 Outer membrane protein assembly factor BamC Y11_00081 6f4286dc9572a8e44cdb5b13441d86bf 352 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 344 38.988 T 13-10-2018 IPR014524 Outer membrane protein assembly factor BamC Y11_00081 6f4286dc9572a8e44cdb5b13441d86bf 352 Gene3D G3DSA:3.30.310.170 227 351 1.9E-47 T 13-10-2018 Y11_00081 6f4286dc9572a8e44cdb5b13441d86bf 352 Pfam PF06804 NlpB/DapX lipoprotein 40 343 1.1E-111 T 13-10-2018 IPR010653 NlpB/DapX lipoprotein Y11_00081 6f4286dc9572a8e44cdb5b13441d86bf 352 Gene3D G3DSA:3.30.530.50 101 213 2.0E-45 T 13-10-2018 Y11_29401 b70146147376a0316aed8ce0dc358a17 217 Pfam PF01926 50S ribosome-binding GTPase 30 148 6.9E-20 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_29401 b70146147376a0316aed8ce0dc358a17 217 Gene3D G3DSA:3.40.50.300 3 205 2.3E-58 T 13-10-2018 Y11_29401 b70146147376a0316aed8ce0dc358a17 217 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 199 27.369 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Y11_29401 b70146147376a0316aed8ce0dc358a17 217 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 12 195 6.2E-73 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Y11_29401 b70146147376a0316aed8ce0dc358a17 217 SUPERFAMILY SSF52540 19 209 4.98E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_13631 638ea1b4d84a437171af9c893e57da35 170 Pfam PF13683 Integrase core domain 93 155 5.5E-21 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_13631 638ea1b4d84a437171af9c893e57da35 170 SUPERFAMILY SSF53098 95 158 5.61E-11 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_17381 f85c7eb95fae895b0983bf287d4c9d63 312 Pfam PF01545 Cation efflux family 22 221 2.6E-35 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Y11_17381 f85c7eb95fae895b0983bf287d4c9d63 312 Gene3D G3DSA:1.20.1510.10 19 223 5.1E-24 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Y11_17381 f85c7eb95fae895b0983bf287d4c9d63 312 SUPERFAMILY SSF161111 16 223 5.62E-35 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Y11_42021 cb5c33a3e5974534d577fd676b115e4a 453 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 440 1.6E-154 T 13-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 Y11_42021 cb5c33a3e5974534d577fd676b115e4a 453 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 440 1.6E-154 T 13-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 Y11_42021 cb5c33a3e5974534d577fd676b115e4a 453 PIRSF PIRSF006351 1 447 1.2E-125 T 13-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 Y11_42021 cb5c33a3e5974534d577fd676b115e4a 453 Pfam PF02378 Phosphotransferase system, EIIC 30 363 2.1E-43 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Y11_27531 7ae85880620683f315f232da51d5f480 359 Hamap MF_01201 Alanine racemase. 1 357 33.976 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_27531 7ae85880620683f315f232da51d5f480 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 13-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_27531 7ae85880620683f315f232da51d5f480 359 SUPERFAMILY SSF50621 227 358 1.12E-42 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Y11_27531 7ae85880620683f315f232da51d5f480 359 TIGRFAM TIGR00492 alr: alanine racemase 3 357 5.6E-136 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_27531 7ae85880620683f315f232da51d5f480 359 PRINTS PR00992 Alanine racemase signature 339 352 3.0E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_27531 7ae85880620683f315f232da51d5f480 359 PRINTS PR00992 Alanine racemase signature 192 219 3.0E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_27531 7ae85880620683f315f232da51d5f480 359 PRINTS PR00992 Alanine racemase signature 155 166 3.0E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_27531 7ae85880620683f315f232da51d5f480 359 PRINTS PR00992 Alanine racemase signature 287 304 3.0E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_27531 7ae85880620683f315f232da51d5f480 359 PRINTS PR00992 Alanine racemase signature 60 78 3.0E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_27531 7ae85880620683f315f232da51d5f480 359 PRINTS PR00992 Alanine racemase signature 120 132 3.0E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_27531 7ae85880620683f315f232da51d5f480 359 PRINTS PR00992 Alanine racemase signature 249 264 3.0E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_27531 7ae85880620683f315f232da51d5f480 359 PRINTS PR00992 Alanine racemase signature 266 281 3.0E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_27531 7ae85880620683f315f232da51d5f480 359 PRINTS PR00992 Alanine racemase signature 26 42 3.0E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_27531 7ae85880620683f315f232da51d5f480 359 Gene3D G3DSA:3.20.20.10 10 217 5.5E-131 T 13-10-2018 IPR029066 PLP-binding barrel Y11_27531 7ae85880620683f315f232da51d5f480 359 SUPERFAMILY SSF51419 8 234 2.62E-71 T 13-10-2018 IPR029066 PLP-binding barrel Y11_27531 7ae85880620683f315f232da51d5f480 359 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 1.6E-37 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_27531 7ae85880620683f315f232da51d5f480 359 Gene3D G3DSA:2.40.37.10 8 352 5.5E-131 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Y11_27531 7ae85880620683f315f232da51d5f480 359 SMART SM01005 233 357 5.4E-58 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_27531 7ae85880620683f315f232da51d5f480 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 2.6E-71 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_42241 fccd9a0aa71c71946d80f76a6e5b5102 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_42241 fccd9a0aa71c71946d80f76a6e5b5102 349 Pfam PF01548 Transposase 16 156 2.7E-14 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_34631 03367bb3dfefbb6d3ea0348ebf1a5902 251 Gene3D G3DSA:3.40.50.150 31 251 5.8E-76 T 13-10-2018 Y11_34631 03367bb3dfefbb6d3ea0348ebf1a5902 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Y11_34631 03367bb3dfefbb6d3ea0348ebf1a5902 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.373 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Y11_34631 03367bb3dfefbb6d3ea0348ebf1a5902 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Y11_34631 03367bb3dfefbb6d3ea0348ebf1a5902 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 3.9E-87 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Y11_34631 03367bb3dfefbb6d3ea0348ebf1a5902 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 250 6.0E-107 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Y11_34631 03367bb3dfefbb6d3ea0348ebf1a5902 251 SUPERFAMILY SSF53335 19 248 2.63E-51 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_36361 a5f66e571ddf53796b290e0cd8e681ee 246 Gene3D G3DSA:3.30.540.10 1 146 4.9E-43 T 13-10-2018 Y11_36361 a5f66e571ddf53796b290e0cd8e681ee 246 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Y11_36361 a5f66e571ddf53796b290e0cd8e681ee 246 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 244 5.1E-102 T 13-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 Y11_36361 a5f66e571ddf53796b290e0cd8e681ee 246 Gene3D G3DSA:3.40.190.80 147 245 1.1E-32 T 13-10-2018 Y11_36361 a5f66e571ddf53796b290e0cd8e681ee 246 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 1 246 40.327 T 13-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 Y11_36361 a5f66e571ddf53796b290e0cd8e681ee 246 SUPERFAMILY SSF56655 1 242 3.8E-72 T 13-10-2018 Y11_36361 a5f66e571ddf53796b290e0cd8e681ee 246 Pfam PF00459 Inositol monophosphatase family 3 232 2.0E-46 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Y11_36361 a5f66e571ddf53796b290e0cd8e681ee 246 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 204 218 - T 13-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Y11_30081 03114528ca550b8114ee1ce16e723f64 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.0E-111 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Y11_30081 03114528ca550b8114ee1ce16e723f64 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 2.2E-38 T 13-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Y11_30081 03114528ca550b8114ee1ce16e723f64 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.0E-43 T 13-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Y11_30081 03114528ca550b8114ee1ce16e723f64 366 SUPERFAMILY SSF55979 245 366 9.42E-37 T 13-10-2018 Y11_30081 03114528ca550b8114ee1ce16e723f64 366 Gene3D G3DSA:3.10.150.10 248 366 3.5E-41 T 13-10-2018 Y11_30081 03114528ca550b8114ee1ce16e723f64 366 SUPERFAMILY SSF55979 1 121 2.47E-26 T 13-10-2018 Y11_30081 03114528ca550b8114ee1ce16e723f64 366 SUPERFAMILY SSF55979 125 244 9.42E-31 T 13-10-2018 Y11_30081 03114528ca550b8114ee1ce16e723f64 366 Gene3D G3DSA:3.10.150.10 1 123 2.3E-42 T 13-10-2018 Y11_30081 03114528ca550b8114ee1ce16e723f64 366 SMART SM00480 17 362 5.3E-165 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Y11_30081 03114528ca550b8114ee1ce16e723f64 366 Gene3D G3DSA:3.10.150.10 124 247 8.4E-40 T 13-10-2018 Y11_30081 03114528ca550b8114ee1ce16e723f64 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 5.1E-40 T 13-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Y11_30081 03114528ca550b8114ee1ce16e723f64 366 PIRSF PIRSF000804 1 366 2.2E-115 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Y11_15251 f7fd056cc0c6d1e627a0115bfa85a5cd 462 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 86 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Y11_15251 f7fd056cc0c6d1e627a0115bfa85a5cd 462 Gene3D G3DSA:1.20.1250.20 6 457 2.1E-118 T 13-10-2018 Y11_15251 f7fd056cc0c6d1e627a0115bfa85a5cd 462 SUPERFAMILY SSF103473 8 457 6.54E-76 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_15251 f7fd056cc0c6d1e627a0115bfa85a5cd 462 PRINTS PR00171 Sugar transporter signature 106 125 4.3E-20 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Y11_15251 f7fd056cc0c6d1e627a0115bfa85a5cd 462 PRINTS PR00171 Sugar transporter signature 270 280 4.3E-20 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Y11_15251 f7fd056cc0c6d1e627a0115bfa85a5cd 462 PRINTS PR00171 Sugar transporter signature 359 380 4.3E-20 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Y11_15251 f7fd056cc0c6d1e627a0115bfa85a5cd 462 PRINTS PR00171 Sugar transporter signature 23 33 4.3E-20 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Y11_15251 f7fd056cc0c6d1e627a0115bfa85a5cd 462 PRINTS PR00171 Sugar transporter signature 382 394 4.3E-20 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Y11_15251 f7fd056cc0c6d1e627a0115bfa85a5cd 462 Pfam PF00083 Sugar (and other) transporter 16 457 7.7E-105 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Y11_15251 f7fd056cc0c6d1e627a0115bfa85a5cd 462 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 11 453 3.0E-100 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Y11_20991 2e92eafe27eb5c63f9acce0973eb517a 458 Gene3D G3DSA:1.20.1740.10 7 458 5.6E-61 T 13-10-2018 Y11_20991 2e92eafe27eb5c63f9acce0973eb517a 458 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 13-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 Y11_20991 2e92eafe27eb5c63f9acce0973eb517a 458 Pfam PF00324 Amino acid permease 17 455 9.3E-109 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Y11_20991 2e92eafe27eb5c63f9acce0973eb517a 458 PIRSF PIRSF006060 4 458 3.7E-71 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_16701 d007605bf55a88de2561422a4b9d220b 83 Pfam PF13683 Integrase core domain 3 65 2.7E-28 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_16701 d007605bf55a88de2561422a4b9d220b 83 SUPERFAMILY SSF53098 3 68 5.69E-15 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_p0521 49f52e72f3e24829b4a4ff8d4f3a7adf 167 Gene3D G3DSA:3.30.420.10 34 163 1.9E-17 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_p0521 49f52e72f3e24829b4a4ff8d4f3a7adf 167 SUPERFAMILY SSF53098 30 159 1.64E-36 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_p0521 49f52e72f3e24829b4a4ff8d4f3a7adf 167 Pfam PF00665 Integrase core domain 37 152 3.0E-32 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_26941 5ed530fe9f23b5a11cb253f39a40fffd 159 SUPERFAMILY SSF46785 6 77 1.8E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_26941 5ed530fe9f23b5a11cb253f39a40fffd 159 Gene3D G3DSA:1.10.10.10 4 89 4.5E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_26941 5ed530fe9f23b5a11cb253f39a40fffd 159 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 3.9E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_32601 565be7a4e73b699f5fc5761bbc07dd33 332 Pfam PF00561 alpha/beta hydrolase fold 66 305 3.7E-19 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_32601 565be7a4e73b699f5fc5761bbc07dd33 332 SUPERFAMILY SSF53474 32 312 3.81E-42 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_32601 565be7a4e73b699f5fc5761bbc07dd33 332 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 232 273 - T 13-10-2018 IPR000952 AB hydrolase 4, conserved site Y11_32601 565be7a4e73b699f5fc5761bbc07dd33 332 PIRSF PIRSF005211 4 332 3.7E-104 T 13-10-2018 IPR012020 AB hydrolase 4 family Y11_32601 565be7a4e73b699f5fc5761bbc07dd33 332 Gene3D G3DSA:3.40.50.1820 50 332 1.8E-26 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_09121 c722333458807d7024e37b993fc0aba2 318 Gene3D G3DSA:3.40.50.12370 1 315 2.0E-132 T 13-10-2018 Y11_09121 c722333458807d7024e37b993fc0aba2 318 SUPERFAMILY SSF52402 4 153 7.53E-29 T 13-10-2018 Y11_09121 c722333458807d7024e37b993fc0aba2 318 Pfam PF00582 Universal stress protein family 182 300 1.1E-11 T 13-10-2018 IPR006016 UspA Y11_09121 c722333458807d7024e37b993fc0aba2 318 Pfam PF00582 Universal stress protein family 4 146 1.7E-20 T 13-10-2018 IPR006016 UspA Y11_09121 c722333458807d7024e37b993fc0aba2 318 SUPERFAMILY SSF52402 156 307 7.37E-24 T 13-10-2018 Y11_33661 a824dec8b3ba8c868c073fea6540e8d4 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.3E-220 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Y11_33661 a824dec8b3ba8c868c073fea6540e8d4 419 SMART SM00959 5 47 8.6E-17 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Y11_33661 a824dec8b3ba8c868c073fea6540e8d4 419 Gene3D G3DSA:2.40.50.140 48 117 2.0E-35 T 13-10-2018 Y11_33661 a824dec8b3ba8c868c073fea6540e8d4 419 SMART SM00357 52 118 2.0E-18 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Y11_33661 a824dec8b3ba8c868c073fea6540e8d4 419 Gene3D G3DSA:1.10.720.10 1 47 4.6E-24 T 13-10-2018 Y11_33661 a824dec8b3ba8c868c073fea6540e8d4 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.8E-16 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Y11_33661 a824dec8b3ba8c868c073fea6540e8d4 419 SUPERFAMILY SSF52540 90 371 2.66E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_33661 a824dec8b3ba8c868c073fea6540e8d4 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.9E-22 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_33661 a824dec8b3ba8c868c073fea6540e8d4 419 SMART SM00382 170 355 2.0E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_33661 a824dec8b3ba8c868c073fea6540e8d4 419 SUPERFAMILY SSF68912 1 46 6.67E-12 T 13-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Y11_33661 a824dec8b3ba8c868c073fea6540e8d4 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 249.503 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Y11_33661 a824dec8b3ba8c868c073fea6540e8d4 419 SUPERFAMILY SSF50249 48 125 5.57E-30 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_33661 a824dec8b3ba8c868c073fea6540e8d4 419 Gene3D G3DSA:3.40.50.300 130 417 7.3E-134 T 13-10-2018 Y11_33661 a824dec8b3ba8c868c073fea6540e8d4 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 3.2E-32 T 13-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Y11_24261 0d931d0bd71fdbe06e0423ff3834403b 323 PRINTS PR01010 Flagellar P-ring protein signature 40 59 3.4E-58 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_24261 0d931d0bd71fdbe06e0423ff3834403b 323 PRINTS PR01010 Flagellar P-ring protein signature 14 29 3.4E-58 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_24261 0d931d0bd71fdbe06e0423ff3834403b 323 PRINTS PR01010 Flagellar P-ring protein signature 120 138 3.4E-58 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_24261 0d931d0bd71fdbe06e0423ff3834403b 323 PRINTS PR01010 Flagellar P-ring protein signature 146 164 3.4E-58 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_24261 0d931d0bd71fdbe06e0423ff3834403b 323 PRINTS PR01010 Flagellar P-ring protein signature 210 222 3.4E-58 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_24261 0d931d0bd71fdbe06e0423ff3834403b 323 PRINTS PR01010 Flagellar P-ring protein signature 62 79 3.4E-58 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_24261 0d931d0bd71fdbe06e0423ff3834403b 323 PRINTS PR01010 Flagellar P-ring protein signature 79 97 3.4E-58 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_24261 0d931d0bd71fdbe06e0423ff3834403b 323 Pfam PF02119 Flagellar P-ring protein 1 322 1.3E-119 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_24261 0d931d0bd71fdbe06e0423ff3834403b 323 Hamap MF_00416 Flagellar P-ring protein [flgI]. 1 323 29.53 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Y11_42041 9956c16b4cc84cbccd153fc45b3d73db 115 Gene3D G3DSA:1.20.58.280 14 115 4.2E-37 T 13-10-2018 Y11_42041 9956c16b4cc84cbccd153fc45b3d73db 115 PIRSF PIRSF000699 11 115 3.3E-39 T 13-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 Y11_42041 9956c16b4cc84cbccd153fc45b3d73db 115 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 20 112 1.5E-33 T 13-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 Y11_42041 9956c16b4cc84cbccd153fc45b3d73db 115 SUPERFAMILY SSF46973 15 113 6.93E-35 T 13-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 Gene3D G3DSA:3.30.499.10 325 470 3.0E-51 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 PRINTS PR00415 Aconitase family signature 195 208 3.0E-50 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 PRINTS PR00415 Aconitase family signature 82 95 3.0E-50 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 PRINTS PR00415 Aconitase family signature 209 222 3.0E-50 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 PRINTS PR00415 Aconitase family signature 108 116 3.0E-50 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 PRINTS PR00415 Aconitase family signature 119 132 3.0E-50 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 PRINTS PR00415 Aconitase family signature 286 300 3.0E-50 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 PRINTS PR00415 Aconitase family signature 343 354 3.0E-50 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 PRINTS PR00415 Aconitase family signature 399 412 3.0E-50 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 PRINTS PR00415 Aconitase family signature 133 148 3.0E-50 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 61.99 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 SUPERFAMILY SSF53732 1 465 1.44E-168 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 Gene3D G3DSA:3.30.499.20 4 286 1.3E-100 T 13-10-2018 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 1.6E-267 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Y11_38841 e892581409d2fb8e64049f572ef812cc 470 Pfam PF00330 Aconitase family (aconitate hydratase) 8 457 1.3E-161 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Y11_p0841 6148be1dbf07f8d05896f2ef0af68a5b 704 Gene3D G3DSA:1.10.490.80 604 702 2.2E-33 T 13-10-2018 Y11_p0841 6148be1dbf07f8d05896f2ef0af68a5b 704 Gene3D G3DSA:1.10.8.540 514 602 7.1E-32 T 13-10-2018 Y11_p0841 6148be1dbf07f8d05896f2ef0af68a5b 704 PIRSF PIRSF005419 4 704 1.5E-262 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_p0841 6148be1dbf07f8d05896f2ef0af68a5b 704 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 15 702 0.0 T 13-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 Y11_p0841 6148be1dbf07f8d05896f2ef0af68a5b 704 Gene3D G3DSA:3.40.30.60 368 513 1.4E-40 T 13-10-2018 Y11_p0841 6148be1dbf07f8d05896f2ef0af68a5b 704 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 138 161 - T 13-10-2018 IPR025505 FHIPEP conserved site Y11_p0841 6148be1dbf07f8d05896f2ef0af68a5b 704 Pfam PF00771 FHIPEP family 27 694 4.4E-237 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_p0841 6148be1dbf07f8d05896f2ef0af68a5b 704 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 233 247 3.6E-58 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_p0841 6148be1dbf07f8d05896f2ef0af68a5b 704 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 3.6E-58 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_p0841 6148be1dbf07f8d05896f2ef0af68a5b 704 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 3.6E-58 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_p0841 6148be1dbf07f8d05896f2ef0af68a5b 704 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 133 149 3.6E-58 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_p0841 6148be1dbf07f8d05896f2ef0af68a5b 704 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 182 199 3.6E-58 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_p0841 6148be1dbf07f8d05896f2ef0af68a5b 704 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 152 170 3.6E-58 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Y11_22851 20404696027ba106d6168fac0143c8b2 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.4E-166 T 13-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Y11_22851 20404696027ba106d6168fac0143c8b2 302 SUPERFAMILY SSF52402 6 209 1.02E-74 T 13-10-2018 Y11_22851 20404696027ba106d6168fac0143c8b2 302 Gene3D G3DSA:3.40.50.620 7 212 1.6E-64 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_22851 20404696027ba106d6168fac0143c8b2 302 PIRSF PIRSF002936 1 302 4.8E-155 T 13-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Y11_22851 20404696027ba106d6168fac0143c8b2 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 3.2E-64 T 13-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Y11_22851 20404696027ba106d6168fac0143c8b2 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.573 T 13-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Y11_38831 3724bc72779232457eea99f63bece268 206 Pfam PF00694 Aconitase C-terminal domain 9 131 1.9E-39 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Y11_38831 3724bc72779232457eea99f63bece268 206 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 7 205 44.732 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Y11_38831 3724bc72779232457eea99f63bece268 206 SUPERFAMILY SSF52016 4 203 2.94E-61 T 13-10-2018 Y11_38831 3724bc72779232457eea99f63bece268 206 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 9 194 6.8E-97 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Y11_38831 3724bc72779232457eea99f63bece268 206 Gene3D G3DSA:3.20.19.10 5 186 2.7E-77 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Y11_23271 fddfa5232640ec1d544920e319f0689b 235 SUPERFAMILY SSF54060 25 230 1.41E-86 T 13-10-2018 Y11_23271 fddfa5232640ec1d544920e319f0689b 235 Pfam PF04231 Endonuclease I 42 229 1.0E-41 T 13-10-2018 IPR007346 Endonuclease I GO:0004518 Y11_05281 775b4fb54b146a58ab1c199df4053bc6 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 1.0E-66 T 13-10-2018 Y11_05281 775b4fb54b146a58ab1c199df4053bc6 244 SUPERFAMILY SSF51735 4 243 1.64E-86 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_05281 775b4fb54b146a58ab1c199df4053bc6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.3E-49 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_05281 775b4fb54b146a58ab1c199df4053bc6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.3E-49 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_05281 775b4fb54b146a58ab1c199df4053bc6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.3E-49 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_05281 775b4fb54b146a58ab1c199df4053bc6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.3E-49 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_05281 775b4fb54b146a58ab1c199df4053bc6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.3E-49 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_05281 775b4fb54b146a58ab1c199df4053bc6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.3E-49 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_05281 775b4fb54b146a58ab1c199df4053bc6 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Y11_05281 775b4fb54b146a58ab1c199df4053bc6 244 Gene3D G3DSA:3.40.50.720 1 244 4.7E-86 T 13-10-2018 Y11_05281 775b4fb54b146a58ab1c199df4053bc6 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.2E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_05281 775b4fb54b146a58ab1c199df4053bc6 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.2E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_05281 775b4fb54b146a58ab1c199df4053bc6 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.2E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_05281 775b4fb54b146a58ab1c199df4053bc6 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 2.8E-100 T 13-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Y11_05281 775b4fb54b146a58ab1c199df4053bc6 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 1.7E-5 T 13-10-2018 Y11_32921 af3c4d047818e47056026587970e5315 49 SUPERFAMILY SSF54570 1 41 1.16E-18 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32921 af3c4d047818e47056026587970e5315 49 ProSitePatterns PS00323 Ribosomal protein S19 signature. 10 34 - T 13-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32921 af3c4d047818e47056026587970e5315 49 PIRSF PIRSF002144 1 49 1.2E-17 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32921 af3c4d047818e47056026587970e5315 49 Pfam PF00203 Ribosomal protein S19 1 40 8.9E-19 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32921 af3c4d047818e47056026587970e5315 49 PRINTS PR00975 Ribosomal protein S19 family signature 10 22 1.1E-12 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32921 af3c4d047818e47056026587970e5315 49 PRINTS PR00975 Ribosomal protein S19 family signature 22 37 1.1E-12 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32921 af3c4d047818e47056026587970e5315 49 Gene3D G3DSA:3.30.860.10 1 49 2.2E-22 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_36861 38b04ea05185c8400c7427152472a646 159 Gene3D G3DSA:3.40.630.30 1 159 4.6E-43 T 13-10-2018 Y11_36861 38b04ea05185c8400c7427152472a646 159 Pfam PF00583 Acetyltransferase (GNAT) family 33 114 6.5E-5 T 13-10-2018 IPR000182 GNAT domain Y11_36861 38b04ea05185c8400c7427152472a646 159 SUPERFAMILY SSF55729 2 151 8.11E-19 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_01161 627e786baa00a053632cc09534e4386a 211 SUPERFAMILY SSF159594 39 208 7.32E-44 T 13-10-2018 Y11_01161 627e786baa00a053632cc09534e4386a 211 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 41 201 3.4E-23 T 13-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component Y11_01161 627e786baa00a053632cc09534e4386a 211 Gene3D G3DSA:3.40.50.10610 30 211 7.1E-53 T 13-10-2018 Y11_05431 cafd81663b1ac69eb663ea7ec01757b3 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 26 93 5.1E-16 T 13-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Y11_05431 cafd81663b1ac69eb663ea7ec01757b3 273 SUPERFAMILY SSF53223 8 105 8.06E-26 T 13-10-2018 Y11_05431 cafd81663b1ac69eb663ea7ec01757b3 273 Gene3D G3DSA:3.40.50.10860 4 103 2.3E-31 T 13-10-2018 Y11_05431 cafd81663b1ac69eb663ea7ec01757b3 273 Gene3D G3DSA:3.40.50.720 104 273 3.7E-36 T 13-10-2018 Y11_05431 cafd81663b1ac69eb663ea7ec01757b3 273 SUPERFAMILY SSF51735 106 266 1.23E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_24231 744acef424846194c4ef02434876b1b7 293 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 129 3.5E-9 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Y11_24231 744acef424846194c4ef02434876b1b7 293 SUPERFAMILY SSF64518 4 293 6.15E-37 T 13-10-2018 Y11_24231 744acef424846194c4ef02434876b1b7 293 Pfam PF00700 Bacterial flagellin C-terminal helical region 213 293 1.3E-5 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Y11_12171 a82e9ec35c09118b1620d31bae8cb33b 269 Gene3D G3DSA:3.40.630.40 3 265 2.0E-67 T 13-10-2018 Y11_12171 a82e9ec35c09118b1620d31bae8cb33b 269 SUPERFAMILY SSF53187 4 265 2.51E-76 T 13-10-2018 Y11_12171 a82e9ec35c09118b1620d31bae8cb33b 269 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 7 265 1.6E-116 T 13-10-2018 IPR010247 N-formylglutamate deformylase Y11_12171 a82e9ec35c09118b1620d31bae8cb33b 269 Pfam PF05013 N-formylglutamate amidohydrolase 15 232 6.5E-63 T 13-10-2018 IPR007709 N-formylglutamate amidohydrolase Y11_35951 c7b88f815de1d0842a5e41f9400f61c2 179 Pfam PF08212 Lipocalin-like domain 34 173 2.4E-43 T 13-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain Y11_35951 c7b88f815de1d0842a5e41f9400f61c2 179 ProSitePatterns PS00213 Lipocalin signature. 32 45 - T 13-10-2018 IPR022272 Lipocalin family conserved site Y11_35951 c7b88f815de1d0842a5e41f9400f61c2 179 PRINTS PR01171 Bacterial lipocalin signature 69 78 5.3E-43 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Y11_35951 c7b88f815de1d0842a5e41f9400f61c2 179 PRINTS PR01171 Bacterial lipocalin signature 120 128 5.3E-43 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Y11_35951 c7b88f815de1d0842a5e41f9400f61c2 179 PRINTS PR01171 Bacterial lipocalin signature 135 146 5.3E-43 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Y11_35951 c7b88f815de1d0842a5e41f9400f61c2 179 PRINTS PR01171 Bacterial lipocalin signature 33 47 5.3E-43 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Y11_35951 c7b88f815de1d0842a5e41f9400f61c2 179 PRINTS PR01171 Bacterial lipocalin signature 103 117 5.3E-43 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Y11_35951 c7b88f815de1d0842a5e41f9400f61c2 179 PRINTS PR01171 Bacterial lipocalin signature 50 66 5.3E-43 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Y11_35951 c7b88f815de1d0842a5e41f9400f61c2 179 PRINTS PR01171 Bacterial lipocalin signature 162 172 5.3E-43 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Y11_35951 c7b88f815de1d0842a5e41f9400f61c2 179 SUPERFAMILY SSF50814 10 174 9.98E-51 T 13-10-2018 IPR012674 Calycin Y11_35951 c7b88f815de1d0842a5e41f9400f61c2 179 Gene3D G3DSA:2.40.128.20 6 174 4.3E-56 T 13-10-2018 IPR012674 Calycin Y11_35951 c7b88f815de1d0842a5e41f9400f61c2 179 PIRSF PIRSF036893 1 178 4.9E-47 T 13-10-2018 IPR022271 Lipocalin, ApoD type Y11_09021 228951ec6fef203a3a95e38fbf6739c3 194 Gene3D G3DSA:1.10.1370.30 1 194 6.0E-86 T 13-10-2018 Y11_09021 228951ec6fef203a3a95e38fbf6739c3 194 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 34 193 6.6E-47 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Y11_09021 228951ec6fef203a3a95e38fbf6739c3 194 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 163 1.9E-14 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Y11_09021 228951ec6fef203a3a95e38fbf6739c3 194 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 30 49 1.9E-14 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Y11_09021 228951ec6fef203a3a95e38fbf6739c3 194 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 100 121 1.9E-14 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Y11_09021 228951ec6fef203a3a95e38fbf6739c3 194 SUPERFAMILY SSF55486 1 194 2.81E-52 T 13-10-2018 Y11_34921 c5f6274d8b3797f7050f8f13ec8e77f0 167 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 13-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_34921 c5f6274d8b3797f7050f8f13ec8e77f0 167 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.765 T 13-10-2018 IPR022973 Ribosomal protein L10 Y11_34921 c5f6274d8b3797f7050f8f13ec8e77f0 167 Pfam PF00466 Ribosomal protein L10 6 101 7.6E-27 T 13-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Y11_34921 c5f6274d8b3797f7050f8f13ec8e77f0 167 SUPERFAMILY SSF160369 4 162 5.89E-49 T 13-10-2018 Y11_34921 c5f6274d8b3797f7050f8f13ec8e77f0 167 Gene3D G3DSA:3.30.70.1730 1 126 1.2E-35 T 13-10-2018 Y11_34921 c5f6274d8b3797f7050f8f13ec8e77f0 167 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 157 4.0E-4 T 13-10-2018 Y11_23661 2b03d34e707cc854c66c5ec08ad73323 487 Gene3D G3DSA:3.20.20.140 124 427 1.4E-128 T 13-10-2018 Y11_23661 2b03d34e707cc854c66c5ec08ad73323 487 Gene3D G3DSA:2.30.40.10 72 477 1.4E-128 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_23661 2b03d34e707cc854c66c5ec08ad73323 487 SUPERFAMILY SSF51338 68 131 1.51E-9 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_23661 2b03d34e707cc854c66c5ec08ad73323 487 SUPERFAMILY SSF51556 123 427 1.26E-75 T 13-10-2018 IPR032466 Metal-dependent hydrolase Y11_23661 2b03d34e707cc854c66c5ec08ad73323 487 Pfam PF01979 Amidohydrolase family 119 476 2.9E-29 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Y11_23661 2b03d34e707cc854c66c5ec08ad73323 487 SUPERFAMILY SSF51338 414 483 3.31E-14 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_p0911 2b3ee6aef45e044d54897a7108c20bb3 76 Pfam PF00872 Transposase, Mutator family 16 61 1.2E-9 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Y11_36851 d279fb76b9fde73d600cc60d0daed0bf 173 SUPERFAMILY SSF55718 42 137 2.35E-22 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Y11_36851 d279fb76b9fde73d600cc60d0daed0bf 173 Pfam PF02036 SCP-2 sterol transfer family 46 133 4.3E-20 T 13-10-2018 IPR003033 SCP2 sterol-binding domain Y11_36851 d279fb76b9fde73d600cc60d0daed0bf 173 Gene3D G3DSA:3.30.1050.10 44 139 7.3E-9 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Y11_36851 d279fb76b9fde73d600cc60d0daed0bf 173 PIRSF PIRSF025550 1 173 2.6E-82 T 13-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT Y11_06401 429d9ba037467462d18c60005ea0a000 460 SUPERFAMILY SSF52540 74 357 2.84E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_06401 429d9ba037467462d18c60005ea0a000 460 Pfam PF00271 Helicase conserved C-terminal domain 237 337 1.2E-27 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_06401 429d9ba037467462d18c60005ea0a000 460 Gene3D G3DSA:3.40.50.300 217 388 9.8E-48 T 13-10-2018 Y11_06401 429d9ba037467462d18c60005ea0a000 460 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 6 460 72.478 T 13-10-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 Y11_06401 429d9ba037467462d18c60005ea0a000 460 Pfam PF00270 DEAD/DEAH box helicase 28 193 7.2E-44 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Y11_06401 429d9ba037467462d18c60005ea0a000 460 SMART SM00487 23 220 4.8E-56 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Y11_06401 429d9ba037467462d18c60005ea0a000 460 Gene3D G3DSA:3.30.70.330 389 459 9.0E-21 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Y11_06401 429d9ba037467462d18c60005ea0a000 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Y11_06401 429d9ba037467462d18c60005ea0a000 460 Pfam PF03880 DbpA RNA binding domain 387 457 2.7E-23 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Y11_06401 429d9ba037467462d18c60005ea0a000 460 Gene3D G3DSA:3.40.50.300 4 210 4.3E-69 T 13-10-2018 Y11_06401 429d9ba037467462d18c60005ea0a000 460 SMART SM00490 256 337 2.9E-30 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_06161 a468df0361d38393238d570fda9f0cf8 463 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 13-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 Y11_06161 a468df0361d38393238d570fda9f0cf8 463 Gene3D G3DSA:1.20.1740.10 9 461 6.5E-59 T 13-10-2018 Y11_06161 a468df0361d38393238d570fda9f0cf8 463 PIRSF PIRSF006060 1 461 2.7E-76 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_06161 a468df0361d38393238d570fda9f0cf8 463 Pfam PF00324 Amino acid permease 18 451 1.3E-116 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Y11_05941 692d4160fb51eed0a3c18e32f1294e5a 304 SUPERFAMILY SSF103481 187 289 5.89E-9 T 13-10-2018 Y11_05941 692d4160fb51eed0a3c18e32f1294e5a 304 SUPERFAMILY SSF103481 36 138 5.62E-13 T 13-10-2018 Y11_05941 692d4160fb51eed0a3c18e32f1294e5a 304 Pfam PF00892 EamA-like transporter family 3 135 1.0E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_05941 692d4160fb51eed0a3c18e32f1294e5a 304 Pfam PF00892 EamA-like transporter family 151 286 1.7E-14 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_33691 0d0ba6dbc0422f8a9714fc51b1cae083 376 Gene3D G3DSA:3.40.50.2000 2 367 1.5E-156 T 13-10-2018 Y11_33691 0d0ba6dbc0422f8a9714fc51b1cae083 376 Gene3D G3DSA:3.40.50.2000 187 356 1.5E-156 T 13-10-2018 Y11_33691 0d0ba6dbc0422f8a9714fc51b1cae083 376 SUPERFAMILY SSF53756 2 372 1.12E-141 T 13-10-2018 Y11_33691 0d0ba6dbc0422f8a9714fc51b1cae083 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 1.1E-127 T 13-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Y11_33691 0d0ba6dbc0422f8a9714fc51b1cae083 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 2.4E-171 T 13-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 Y11_33691 0d0ba6dbc0422f8a9714fc51b1cae083 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 68.317 T 13-10-2018 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 Y11_42681 69a042c8bedd60a3f1470c3d9fe5dda9 268 Gene3D G3DSA:3.30.540.10 1 140 5.2E-52 T 13-10-2018 Y11_42681 69a042c8bedd60a3f1470c3d9fe5dda9 268 Pfam PF00459 Inositol monophosphatase family 2 259 3.7E-70 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Y11_42681 69a042c8bedd60a3f1470c3d9fe5dda9 268 SUPERFAMILY SSF56655 1 257 1.31E-84 T 13-10-2018 Y11_42681 69a042c8bedd60a3f1470c3d9fe5dda9 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 3.5E-59 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Y11_42681 69a042c8bedd60a3f1470c3d9fe5dda9 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 3.5E-59 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Y11_42681 69a042c8bedd60a3f1470c3d9fe5dda9 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 3.5E-59 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Y11_42681 69a042c8bedd60a3f1470c3d9fe5dda9 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 3.5E-59 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Y11_42681 69a042c8bedd60a3f1470c3d9fe5dda9 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 3.5E-59 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Y11_42681 69a042c8bedd60a3f1470c3d9fe5dda9 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 3.5E-59 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Y11_42681 69a042c8bedd60a3f1470c3d9fe5dda9 268 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Y11_42681 69a042c8bedd60a3f1470c3d9fe5dda9 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.0E-37 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Y11_42681 69a042c8bedd60a3f1470c3d9fe5dda9 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 2.0E-37 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Y11_42681 69a042c8bedd60a3f1470c3d9fe5dda9 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 2.0E-37 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Y11_42681 69a042c8bedd60a3f1470c3d9fe5dda9 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 2.0E-37 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Y11_42681 69a042c8bedd60a3f1470c3d9fe5dda9 268 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 13-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Y11_42681 69a042c8bedd60a3f1470c3d9fe5dda9 268 Gene3D G3DSA:3.40.190.80 142 268 1.3E-38 T 13-10-2018 Y11_38161 3f445d052936e4aa6bbb7edff3e06590 376 Pfam PF13776 Domain of unknown function (DUF4172) 6 87 9.6E-28 T 13-10-2018 IPR025230 Domain of unknown function DUF4172 Y11_38161 3f445d052936e4aa6bbb7edff3e06590 376 Gene3D G3DSA:1.10.10.10 280 373 3.1E-5 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_38161 3f445d052936e4aa6bbb7edff3e06590 376 Gene3D G3DSA:1.10.3290.10 40 279 3.4E-37 T 13-10-2018 IPR036597 Fido-like domain superfamily Y11_38161 3f445d052936e4aa6bbb7edff3e06590 376 SUPERFAMILY SSF140931 104 298 7.59E-38 T 13-10-2018 IPR036597 Fido-like domain superfamily Y11_38161 3f445d052936e4aa6bbb7edff3e06590 376 Pfam PF02661 Fic/DOC family 117 227 4.4E-17 T 13-10-2018 IPR003812 Fido domain Y11_22771 e6f7c16e472c67bc7c48b6d6a041a395 250 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 250 39.119 T 13-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Y11_22771 e6f7c16e472c67bc7c48b6d6a041a395 250 SUPERFAMILY SSF64167 2 246 1.11E-79 T 13-10-2018 Y11_22771 e6f7c16e472c67bc7c48b6d6a041a395 250 Pfam PF01975 Survival protein SurE 4 182 1.1E-55 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Y11_22771 e6f7c16e472c67bc7c48b6d6a041a395 250 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 233 1.3E-74 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Y11_22771 e6f7c16e472c67bc7c48b6d6a041a395 250 Gene3D G3DSA:3.40.1210.10 1 250 5.0E-101 T 13-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Y11_06941 21c6c0e5a965a2bc65d06525f0f8df5c 310 Gene3D G3DSA:3.40.190.10 169 272 1.1E-62 T 13-10-2018 Y11_06941 21c6c0e5a965a2bc65d06525f0f8df5c 310 Gene3D G3DSA:3.40.190.10 98 298 1.1E-62 T 13-10-2018 Y11_06941 21c6c0e5a965a2bc65d06525f0f8df5c 310 Gene3D G3DSA:1.10.10.10 9 95 4.0E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_06941 21c6c0e5a965a2bc65d06525f0f8df5c 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 4.7E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_06941 21c6c0e5a965a2bc65d06525f0f8df5c 310 SUPERFAMILY SSF46785 11 94 2.01E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_06941 21c6c0e5a965a2bc65d06525f0f8df5c 310 Pfam PF03466 LysR substrate binding domain 93 300 6.4E-43 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_06941 21c6c0e5a965a2bc65d06525f0f8df5c 310 SUPERFAMILY SSF53850 94 304 1.21E-43 T 13-10-2018 Y11_36321 1fcce77c2eaa2ad707519bf8858e77f3 224 Gene3D G3DSA:3.10.450.350 130 223 6.2E-13 T 13-10-2018 Y11_36321 1fcce77c2eaa2ad707519bf8858e77f3 224 Pfam PF08525 Opacity-associated protein A N-terminal motif 65 91 5.3E-8 T 13-10-2018 IPR013731 Opacity-associated protein A, N-terminal Y11_36321 1fcce77c2eaa2ad707519bf8858e77f3 224 Pfam PF04225 Opacity-associated protein A LysM-like domain 139 224 2.3E-37 T 13-10-2018 IPR007340 Opacity-associated protein A Y11_29531 7d1181d54e4be35b34cc561d4c709fa3 308 Pfam PF00294 pfkB family carbohydrate kinase 5 296 7.6E-76 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Y11_29531 7d1181d54e4be35b34cc561d4c709fa3 308 PRINTS PR00990 Ribokinase signature 107 120 5.4E-38 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Y11_29531 7d1181d54e4be35b34cc561d4c709fa3 308 PRINTS PR00990 Ribokinase signature 219 230 5.4E-38 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Y11_29531 7d1181d54e4be35b34cc561d4c709fa3 308 PRINTS PR00990 Ribokinase signature 8 29 5.4E-38 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Y11_29531 7d1181d54e4be35b34cc561d4c709fa3 308 PRINTS PR00990 Ribokinase signature 175 190 5.4E-38 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Y11_29531 7d1181d54e4be35b34cc561d4c709fa3 308 PRINTS PR00990 Ribokinase signature 35 54 5.4E-38 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Y11_29531 7d1181d54e4be35b34cc561d4c709fa3 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 7 301 1.3E-110 T 13-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 Y11_29531 7d1181d54e4be35b34cc561d4c709fa3 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Y11_29531 7d1181d54e4be35b34cc561d4c709fa3 308 Gene3D G3DSA:3.40.1190.20 3 302 4.0E-102 T 13-10-2018 IPR029056 Ribokinase-like Y11_29531 7d1181d54e4be35b34cc561d4c709fa3 308 SUPERFAMILY SSF53613 5 304 8.26E-84 T 13-10-2018 IPR029056 Ribokinase-like Y11_29531 7d1181d54e4be35b34cc561d4c709fa3 308 Hamap MF_01987 Ribokinase [rbsK]. 4 303 26.379 T 13-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 Y11_09961 f0b145bcb3d36724386dfe2355b008f1 464 Gene3D G3DSA:1.20.200.10 139 407 4.1E-119 T 13-10-2018 Y11_09961 f0b145bcb3d36724386dfe2355b008f1 464 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Y11_09961 f0b145bcb3d36724386dfe2355b008f1 464 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 2.6E-33 T 13-10-2018 IPR000362 Fumarate lyase family Y11_09961 f0b145bcb3d36724386dfe2355b008f1 464 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 2.6E-33 T 13-10-2018 IPR000362 Fumarate lyase family Y11_09961 f0b145bcb3d36724386dfe2355b008f1 464 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 2.6E-33 T 13-10-2018 IPR000362 Fumarate lyase family Y11_09961 f0b145bcb3d36724386dfe2355b008f1 464 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 2.6E-33 T 13-10-2018 IPR000362 Fumarate lyase family Y11_09961 f0b145bcb3d36724386dfe2355b008f1 464 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 1.1E-5 T 13-10-2018 Y11_09961 f0b145bcb3d36724386dfe2355b008f1 464 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 1.1E-5 T 13-10-2018 Y11_09961 f0b145bcb3d36724386dfe2355b008f1 464 SUPERFAMILY SSF48557 4 462 4.24E-157 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 Y11_09961 f0b145bcb3d36724386dfe2355b008f1 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 91.293 T 13-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Y11_09961 f0b145bcb3d36724386dfe2355b008f1 464 Gene3D G3DSA:1.10.40.30 408 464 1.4E-31 T 13-10-2018 Y11_09961 f0b145bcb3d36724386dfe2355b008f1 464 Pfam PF10415 Fumarase C C-terminus 408 461 2.3E-26 T 13-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Y11_09961 f0b145bcb3d36724386dfe2355b008f1 464 Pfam PF00206 Lyase 12 342 3.6E-118 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal Y11_09961 f0b145bcb3d36724386dfe2355b008f1 464 Gene3D G3DSA:1.10.275.10 5 138 2.7E-56 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal Y11_09961 f0b145bcb3d36724386dfe2355b008f1 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 1.2E-241 T 13-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Y11_p0471 9d8cc37e9e76b0fc16dfbf54f327e2be 194 Gene3D G3DSA:1.20.120.260 65 194 1.4E-56 T 13-10-2018 IPR037168 Virulence factor YopE, GAP domain superfamily Y11_p0471 9d8cc37e9e76b0fc16dfbf54f327e2be 194 SUPERFAMILY SSF69635 1 53 4.08E-28 T 13-10-2018 Y11_p0471 9d8cc37e9e76b0fc16dfbf54f327e2be 194 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 150 168 5.2E-54 T 13-10-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 Y11_p0471 9d8cc37e9e76b0fc16dfbf54f327e2be 194 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 175 192 5.2E-54 T 13-10-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 Y11_p0471 9d8cc37e9e76b0fc16dfbf54f327e2be 194 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 102 119 5.2E-54 T 13-10-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 Y11_p0471 9d8cc37e9e76b0fc16dfbf54f327e2be 194 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 16 33 5.2E-54 T 13-10-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 Y11_p0471 9d8cc37e9e76b0fc16dfbf54f327e2be 194 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 60 77 5.2E-54 T 13-10-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 Y11_p0471 9d8cc37e9e76b0fc16dfbf54f327e2be 194 Pfam PF09020 YopE, N terminal 1 101 1.5E-64 T 13-10-2018 IPR015110 YopE, N-terminal domain GO:0050765 Y11_p0471 9d8cc37e9e76b0fc16dfbf54f327e2be 194 Pfam PF03545 Yersinia virulence determinant (YopE) 102 170 2.8E-34 T 13-10-2018 IPR014773 Virulence factor YopE, GAP domain Y11_p0471 9d8cc37e9e76b0fc16dfbf54f327e2be 194 SUPERFAMILY SSF47233 76 194 1.83E-48 T 13-10-2018 IPR037168 Virulence factor YopE, GAP domain superfamily Y11_00501 1ac24957d1a3d0532d2dac4299a3ad02 301 SUPERFAMILY SSF54909 1 299 2.32E-92 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Y11_00501 1ac24957d1a3d0532d2dac4299a3ad02 301 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 298 5.7E-86 T 13-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 Y11_00501 1ac24957d1a3d0532d2dac4299a3ad02 301 Pfam PF04261 Dyp-type peroxidase family 5 297 3.3E-92 T 13-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 Y11_34541 2ccfa9561a61909dc10186ce9021d761 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 13-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 Y11_34541 2ccfa9561a61909dc10186ce9021d761 253 SUPERFAMILY SSF53167 6 250 7.86E-74 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Y11_34541 2ccfa9561a61909dc10186ce9021d761 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 5.9E-128 T 13-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 Y11_34541 2ccfa9561a61909dc10186ce9021d761 253 Pfam PF01048 Phosphorylase superfamily 21 237 4.2E-39 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Y11_34541 2ccfa9561a61909dc10186ce9021d761 253 Gene3D G3DSA:3.40.50.1580 1 253 3.8E-80 T 13-10-2018 Y11_02801 d30dd25d94f78c88fac47a101795546d 595 SUPERFAMILY SSF58104 314 595 3.01E-70 T 13-10-2018 Y11_02801 d30dd25d94f78c88fac47a101795546d 595 Gene3D G3DSA:1.10.287.950 292 595 6.6E-84 T 13-10-2018 Y11_02801 d30dd25d94f78c88fac47a101795546d 595 Pfam PF02743 Cache domain 33 254 9.9E-30 T 13-10-2018 IPR033479 Double Cache domain 1 Y11_02801 d30dd25d94f78c88fac47a101795546d 595 SUPERFAMILY SSF103190 93 177 5.49E-14 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Y11_02801 d30dd25d94f78c88fac47a101795546d 595 Gene3D G3DSA:3.30.450.20 64 168 2.7E-49 T 13-10-2018 Y11_02801 d30dd25d94f78c88fac47a101795546d 595 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 561 2.0E-50 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_02801 d30dd25d94f78c88fac47a101795546d 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 522 551 1.7E-52 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_02801 d30dd25d94f78c88fac47a101795546d 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 503 1.7E-52 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_02801 d30dd25d94f78c88fac47a101795546d 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 472 1.7E-52 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_02801 d30dd25d94f78c88fac47a101795546d 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 271 291 1.7E-52 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_02801 d30dd25d94f78c88fac47a101795546d 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 397 1.7E-52 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_02801 d30dd25d94f78c88fac47a101795546d 595 Gene3D G3DSA:3.30.450.20 55 264 2.7E-49 T 13-10-2018 Y11_02801 d30dd25d94f78c88fac47a101795546d 595 Pfam PF00672 HAMP domain 293 342 5.3E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_02801 d30dd25d94f78c88fac47a101795546d 595 SMART SM00283 347 594 5.7E-86 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_02801 d30dd25d94f78c88fac47a101795546d 595 SMART SM00304 292 346 1.6E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Y11_17791 74160af871caac31e2921740772cc5e2 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 2.9E-105 T 13-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE Y11_17791 74160af871caac31e2921740772cc5e2 232 Pfam PF00005 ABC transporter 17 161 4.2E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_17791 74160af871caac31e2921740772cc5e2 232 SUPERFAMILY SSF52540 2 220 1.08E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_17791 74160af871caac31e2921740772cc5e2 232 SMART SM00382 26 199 9.7E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_17791 74160af871caac31e2921740772cc5e2 232 Gene3D G3DSA:3.40.50.300 1 225 6.8E-59 T 13-10-2018 Y11_42861 b84c75a24e8c6d3826e21914865a87aa 814 Pfam PF03995 Peptidase inhibitor family I36 115 182 5.9E-5 T 13-10-2018 Y11_42861 b84c75a24e8c6d3826e21914865a87aa 814 SUPERFAMILY SSF49695 20 110 1.02E-14 T 13-10-2018 IPR011024 Gamma-crystallin-like Y11_42861 b84c75a24e8c6d3826e21914865a87aa 814 SMART SM00247 27 111 0.0071 T 13-10-2018 IPR001064 Beta/gamma crystallin Y11_42861 b84c75a24e8c6d3826e21914865a87aa 814 SMART SM00247 113 208 0.03 T 13-10-2018 IPR001064 Beta/gamma crystallin Y11_42861 b84c75a24e8c6d3826e21914865a87aa 814 Pfam PF08964 Beta/Gamma crystallin 26 86 3.8E-8 T 13-10-2018 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal GO:0016020|GO:0098609 Y11_42861 b84c75a24e8c6d3826e21914865a87aa 814 Pfam PF09101 Exotoxin A binding 374 414 1.4E-4 T 13-10-2018 IPR015185 Exotoxin A, binding Y11_42861 b84c75a24e8c6d3826e21914865a87aa 814 Gene3D G3DSA:2.60.20.10 113 209 1.8E-22 T 13-10-2018 Y11_42861 b84c75a24e8c6d3826e21914865a87aa 814 Gene3D G3DSA:2.60.20.10 11 112 1.0E-21 T 13-10-2018 Y11_42861 b84c75a24e8c6d3826e21914865a87aa 814 SUPERFAMILY SSF49695 114 206 2.58E-15 T 13-10-2018 IPR011024 Gamma-crystallin-like Y11_03971 c2572fdee504bc04e962741378e70bc9 588 Gene3D G3DSA:3.40.50.300 343 587 4.4E-67 T 13-10-2018 Y11_03971 c2572fdee504bc04e962741378e70bc9 588 SMART SM00382 375 560 8.0E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_03971 c2572fdee504bc04e962741378e70bc9 588 SUPERFAMILY SSF52540 365 582 2.58E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_03971 c2572fdee504bc04e962741378e70bc9 588 Pfam PF00005 ABC transporter 369 514 3.1E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_03971 c2572fdee504bc04e962741378e70bc9 588 Gene3D G3DSA:1.20.1560.10 2 334 1.0E-49 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_03971 c2572fdee504bc04e962741378e70bc9 588 Pfam PF00664 ABC transporter transmembrane region 26 291 1.4E-40 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Y11_03971 c2572fdee504bc04e962741378e70bc9 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_03971 c2572fdee504bc04e962741378e70bc9 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 6.2E-202 T 13-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 Y11_03971 c2572fdee504bc04e962741378e70bc9 588 SUPERFAMILY SSF90123 11 331 1.57E-54 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_06541 d09978683c2877f0725bf92992d0a50a 314 SUPERFAMILY SSF56349 21 288 8.54E-48 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Y11_06541 d09978683c2877f0725bf92992d0a50a 314 Gene3D G3DSA:1.10.443.10 130 298 1.7E-48 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Y11_06541 d09978683c2877f0725bf92992d0a50a 314 Pfam PF00589 Phage integrase family 135 280 1.1E-20 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Y11_43361 458750d7c927fbbf654d40401574f21a 270 Gene3D G3DSA:3.40.50.300 20 266 4.4E-63 T 13-10-2018 Y11_43361 458750d7c927fbbf654d40401574f21a 270 SMART SM00382 48 245 1.7E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_43361 458750d7c927fbbf654d40401574f21a 270 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 24 270 8.1E-118 T 13-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Y11_43361 458750d7c927fbbf654d40401574f21a 270 Pfam PF00005 ABC transporter 39 195 2.6E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_43361 458750d7c927fbbf654d40401574f21a 270 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_43361 458750d7c927fbbf654d40401574f21a 270 SUPERFAMILY SSF52540 21 257 8.11E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_27981 49852b6425e3e4cbb2185ca22e41ae3a 227 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 144 222 3.3E-18 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 Y11_27981 49852b6425e3e4cbb2185ca22e41ae3a 227 SUPERFAMILY SSF74653 126 223 5.89E-21 T 13-10-2018 Y11_27981 49852b6425e3e4cbb2185ca22e41ae3a 227 Gene3D G3DSA:3.30.1150.10 58 225 3.0E-32 T 13-10-2018 Y11_27981 49852b6425e3e4cbb2185ca22e41ae3a 227 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 144 223 1.9E-23 T 13-10-2018 IPR006260 TonB/TolA, C-terminal Y11_34211 083ea140bcc96711bcbf7f7dde3309e6 128 Pfam PF10694 Protein of unknown function (DUF2500) 6 121 1.1E-37 T 13-10-2018 IPR019635 Protein of unknown function DUF2500 Y11_34211 083ea140bcc96711bcbf7f7dde3309e6 128 Gene3D G3DSA:2.40.50.660 36 128 4.4E-25 T 13-10-2018 Y11_29221 6bfe231ba3db171acf1440f59586ce00 404 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 1.5E-192 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Y11_29221 6bfe231ba3db171acf1440f59586ce00 404 Pfam PF03616 Sodium/glutamate symporter 2 366 1.9E-161 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Y11_29221 6bfe231ba3db171acf1440f59586ce00 404 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 397 24.697 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Y11_22041 6c5ea3f8324fe4de6951058ab83f3e3c 118 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_22041 6c5ea3f8324fe4de6951058ab83f3e3c 118 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_22041 6c5ea3f8324fe4de6951058ab83f3e3c 118 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_22041 6c5ea3f8324fe4de6951058ab83f3e3c 118 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 13-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_22041 6c5ea3f8324fe4de6951058ab83f3e3c 118 Pfam PF01245 Ribosomal protein L19 3 113 1.3E-49 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_22041 6c5ea3f8324fe4de6951058ab83f3e3c 118 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 3.1E-52 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_22041 6c5ea3f8324fe4de6951058ab83f3e3c 118 SUPERFAMILY SSF50104 2 116 1.4E-47 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Y11_22041 6c5ea3f8324fe4de6951058ab83f3e3c 118 PIRSF PIRSF002191 1 118 7.1E-50 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_22041 6c5ea3f8324fe4de6951058ab83f3e3c 118 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.023 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_22041 6c5ea3f8324fe4de6951058ab83f3e3c 118 Gene3D G3DSA:2.30.30.790 2 118 2.3E-16 T 13-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_39431 9b3fbf931112c62ed3d051d8b1aebe39 108 Gene3D G3DSA:1.20.58.1630 16 107 3.0E-11 T 13-10-2018 IPR038432 PulS/OutS-like superfamily Y11_39431 9b3fbf931112c62ed3d051d8b1aebe39 108 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 7 106 4.0E-39 T 13-10-2018 Y11_39431 9b3fbf931112c62ed3d051d8b1aebe39 108 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 14 99 1.5E-10 T 13-10-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like Y11_35561 a4de948b8667258620bac1e847c5e315 180 Gene3D G3DSA:1.10.10.10 83 176 1.5E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_35561 a4de948b8667258620bac1e847c5e315 180 Pfam PF08281 Sigma-70, region 4 115 166 7.9E-17 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Y11_35561 a4de948b8667258620bac1e847c5e315 180 SUPERFAMILY SSF88659 93 173 7.2E-17 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Y11_35561 a4de948b8667258620bac1e847c5e315 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 168 1.4E-22 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Y11_35561 a4de948b8667258620bac1e847c5e315 180 SUPERFAMILY SSF88946 6 74 1.37E-10 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Y11_35561 a4de948b8667258620bac1e847c5e315 180 Gene3D G3DSA:1.10.1740.10 4 74 8.2E-7 T 13-10-2018 Y11_35561 a4de948b8667258620bac1e847c5e315 180 Pfam PF04542 Sigma-70 region 2 13 77 2.6E-8 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Y11_25351 75bda85e4ac6ded17c874eb08cdaf971 69 Pfam PF16080 Bacteriophage holin family HP1 2 52 2.4E-11 T 13-10-2018 IPR032118 Bacteriophage holin HP1 family Y11_13301 75bda85e4ac6ded17c874eb08cdaf971 69 Pfam PF16080 Bacteriophage holin family HP1 2 52 2.4E-11 T 13-10-2018 IPR032118 Bacteriophage holin HP1 family Y11_20511 5e129d5d118afacc5682f63d456df80a 90 Gene3D G3DSA:4.10.520.10 1 90 3.2E-36 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Y11_20511 5e129d5d118afacc5682f63d456df80a 90 SUPERFAMILY SSF47729 1 90 9.57E-32 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Y11_20511 5e129d5d118afacc5682f63d456df80a 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Y11_20511 5e129d5d118afacc5682f63d456df80a 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.2E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_20511 5e129d5d118afacc5682f63d456df80a 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.2E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_20511 5e129d5d118afacc5682f63d456df80a 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.2E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_20511 5e129d5d118afacc5682f63d456df80a 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.2E-32 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_20511 5e129d5d118afacc5682f63d456df80a 90 SMART SM00411 1 90 4.1E-43 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_30601 76f807a47ade7311d6db2586eb933202 338 PRINTS PR00688 Xylose isomerase signature 229 253 1.8E-78 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Y11_30601 76f807a47ade7311d6db2586eb933202 338 PRINTS PR00688 Xylose isomerase signature 180 201 1.8E-78 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Y11_30601 76f807a47ade7311d6db2586eb933202 338 PRINTS PR00688 Xylose isomerase signature 207 226 1.8E-78 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Y11_30601 76f807a47ade7311d6db2586eb933202 338 PRINTS PR00688 Xylose isomerase signature 133 153 1.8E-78 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Y11_30601 76f807a47ade7311d6db2586eb933202 338 PRINTS PR00688 Xylose isomerase signature 271 298 1.8E-78 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Y11_30601 76f807a47ade7311d6db2586eb933202 338 PRINTS PR00688 Xylose isomerase signature 300 311 1.8E-78 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Y11_30601 76f807a47ade7311d6db2586eb933202 338 PRINTS PR00688 Xylose isomerase signature 92 114 1.8E-78 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Y11_30601 76f807a47ade7311d6db2586eb933202 338 PRINTS PR00688 Xylose isomerase signature 156 175 1.8E-78 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Y11_30601 76f807a47ade7311d6db2586eb933202 338 Hamap MF_00455 Xylose isomerase [xylA]. 11 336 35.949 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Y11_30601 76f807a47ade7311d6db2586eb933202 338 SUPERFAMILY SSF51658 4 330 4.02E-136 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily Y11_30601 76f807a47ade7311d6db2586eb933202 338 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 328 1.5E-166 T 13-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Y11_30601 76f807a47ade7311d6db2586eb933202 338 Gene3D G3DSA:3.20.20.150 2 335 3.5E-135 T 13-10-2018 Y11_06221 5bba276c1e410b547fc989b24fb59162 286 Pfam PF13847 Methyltransferase domain 86 199 1.2E-10 T 13-10-2018 IPR025714 Methyltransferase domain Y11_06221 5bba276c1e410b547fc989b24fb59162 286 PIRSF PIRSF018249 1 271 7.6E-82 T 13-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 Y11_06221 5bba276c1e410b547fc989b24fb59162 286 Gene3D G3DSA:3.40.50.150 1 272 2.1E-78 T 13-10-2018 Y11_06221 5bba276c1e410b547fc989b24fb59162 286 SUPERFAMILY SSF53335 4 259 1.03E-42 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_04091 c738051bcec17c2eb8d0e386f78a2145 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site Y11_04091 c738051bcec17c2eb8d0e386f78a2145 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 3.0E-93 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 Y11_04091 c738051bcec17c2eb8d0e386f78a2145 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 6.4E-130 T 13-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 Y11_04091 c738051bcec17c2eb8d0e386f78a2145 285 Pfam PF01226 Formate/nitrite transporter 15 276 1.4E-75 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 Y11_04091 c738051bcec17c2eb8d0e386f78a2145 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site Y11_04091 c738051bcec17c2eb8d0e386f78a2145 285 Gene3D G3DSA:1.20.1080.10 1 268 3.6E-104 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Y11_22541 6194a35942912f9d04937144faf368d2 468 SUPERFAMILY SSF56954 4 458 7.46E-88 T 13-10-2018 Y11_22541 6194a35942912f9d04937144faf368d2 468 Gene3D G3DSA:1.20.1600.10 55 456 3.5E-99 T 13-10-2018 Y11_22541 6194a35942912f9d04937144faf368d2 468 Pfam PF02321 Outer membrane efflux protein 64 248 1.6E-23 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Y11_22541 6194a35942912f9d04937144faf368d2 468 Pfam PF02321 Outer membrane efflux protein 276 454 1.5E-18 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Y11_22541 6194a35942912f9d04937144faf368d2 468 Gene3D G3DSA:2.20.200.10 101 345 3.5E-99 T 13-10-2018 Y11_22541 6194a35942912f9d04937144faf368d2 468 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 456 1.9E-77 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Y11_20441 46e136dd436b7ef37c371cbe82d114ae 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 9.7E-34 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Y11_20441 46e136dd436b7ef37c371cbe82d114ae 273 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 273 64.032 T 13-10-2018 IPR023938 HMP-PP phosphatase GO:0016818 Y11_20441 46e136dd436b7ef37c371cbe82d114ae 273 Gene3D G3DSA:3.30.1240.10 82 184 2.5E-54 T 13-10-2018 Y11_20441 46e136dd436b7ef37c371cbe82d114ae 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 2.6E-53 T 13-10-2018 IPR000150 Cof family GO:0016787 Y11_20441 46e136dd436b7ef37c371cbe82d114ae 273 SUPERFAMILY SSF56784 1 262 1.05E-60 T 13-10-2018 IPR036412 HAD-like superfamily Y11_20441 46e136dd436b7ef37c371cbe82d114ae 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 1.0E-52 T 13-10-2018 Y11_20441 46e136dd436b7ef37c371cbe82d114ae 273 Gene3D G3DSA:3.40.50.1000 6 254 2.5E-54 T 13-10-2018 IPR023214 HAD superfamily Y11_20441 46e136dd436b7ef37c371cbe82d114ae 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 13-10-2018 Y11_20441 46e136dd436b7ef37c371cbe82d114ae 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 13-10-2018 Y11_04241 607f7a183a0481576490f92c00cf6436 582 SMART SM00382 368 555 3.2E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_04241 607f7a183a0481576490f92c00cf6436 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 5.9E-265 T 13-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 Y11_04241 607f7a183a0481576490f92c00cf6436 582 Gene3D G3DSA:1.20.1560.10 2 328 1.4E-81 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_04241 607f7a183a0481576490f92c00cf6436 582 Pfam PF00664 ABC transporter transmembrane region 28 297 1.1E-59 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Y11_04241 607f7a183a0481576490f92c00cf6436 582 Pfam PF00005 ABC transporter 359 509 1.5E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_04241 607f7a183a0481576490f92c00cf6436 582 SUPERFAMILY SSF90123 14 327 3.14E-75 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_04241 607f7a183a0481576490f92c00cf6436 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_04241 607f7a183a0481576490f92c00cf6436 582 Gene3D G3DSA:3.40.50.300 329 581 1.1E-96 T 13-10-2018 Y11_04241 607f7a183a0481576490f92c00cf6436 582 SUPERFAMILY SSF52540 332 580 5.64E-96 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_05651 f195d24fb65fa57b9be43fc79633ea5b 373 SUPERFAMILY SSF52402 5 245 1.59E-56 T 13-10-2018 Y11_05651 f195d24fb65fa57b9be43fc79633ea5b 373 Gene3D G3DSA:2.30.30.280 214 282 1.8E-28 T 13-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Y11_05651 f195d24fb65fa57b9be43fc79633ea5b 373 Gene3D G3DSA:3.40.50.620 1 212 5.8E-97 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_05651 f195d24fb65fa57b9be43fc79633ea5b 373 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 361 1.0E-156 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Y11_05651 f195d24fb65fa57b9be43fc79633ea5b 373 Pfam PF03054 tRNA methyl transferase 7 361 1.3E-143 T 13-10-2018 Y11_05651 f195d24fb65fa57b9be43fc79633ea5b 373 Gene3D G3DSA:2.40.30.10 283 369 1.6E-34 T 13-10-2018 Y11_05651 f195d24fb65fa57b9be43fc79633ea5b 373 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 362 40.879 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Y11_01101 cf04c860e71af3d28594faa10ce3a23f 576 Gene3D G3DSA:3.10.310.70 85 200 1.9E-112 T 13-10-2018 Y11_01101 cf04c860e71af3d28594faa10ce3a23f 576 Pfam PF07969 Amidohydrolase family 55 573 1.5E-72 T 13-10-2018 IPR013108 Amidohydrolase 3 Y11_01101 cf04c860e71af3d28594faa10ce3a23f 576 SUPERFAMILY SSF51338 3 574 4.57E-16 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_01101 cf04c860e71af3d28594faa10ce3a23f 576 Gene3D G3DSA:2.30.40.10 13 549 1.9E-112 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_01101 cf04c860e71af3d28594faa10ce3a23f 576 Gene3D G3DSA:3.20.20.140 67 532 1.9E-112 T 13-10-2018 Y11_01101 cf04c860e71af3d28594faa10ce3a23f 576 SUPERFAMILY SSF51556 66 533 1.57E-28 T 13-10-2018 IPR032466 Metal-dependent hydrolase Y11_31421 175b554a4be7ef4844276ce56069c93b 234 SUPERFAMILY SSF53335 3 232 6.67E-73 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_31421 175b554a4be7ef4844276ce56069c93b 234 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 1 233 36.594 T 13-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 Y11_31421 175b554a4be7ef4844276ce56069c93b 234 Gene3D G3DSA:3.40.50.150 42 233 2.1E-73 T 13-10-2018 Y11_31421 175b554a4be7ef4844276ce56069c93b 234 Gene3D G3DSA:3.40.1630.10 1 41 2.7E-22 T 13-10-2018 Y11_31421 175b554a4be7ef4844276ce56069c93b 234 Pfam PF04445 Putative SAM-dependent methyltransferase 4 231 1.3E-107 T 13-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 Y11_08121 6fc9e75f22785eccf91f22d5bf3b0b11 349 Gene3D G3DSA:3.20.20.70 1 348 7.2E-153 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_08121 6fc9e75f22785eccf91f22d5bf3b0b11 349 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 9.1E-167 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Y11_08121 6fc9e75f22785eccf91f22d5bf3b0b11 349 Pfam PF00793 DAHP synthetase I family 41 337 2.1E-101 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Y11_08121 6fc9e75f22785eccf91f22d5bf3b0b11 349 PIRSF PIRSF001361 1 349 3.0E-155 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Y11_08121 6fc9e75f22785eccf91f22d5bf3b0b11 349 SUPERFAMILY SSF51569 7 346 9.84E-129 T 13-10-2018 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 SMART SM00896 701 794 1.1E-44 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 SUPERFAMILY SSF54991 696 794 5.23E-30 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 SUPERFAMILY SSF55681 467 690 3.53E-55 T 13-10-2018 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 Gene3D G3DSA:3.30.56.10 7 180 1.1E-74 T 13-10-2018 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 SMART SM00873 212 385 1.8E-97 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 Gene3D G3DSA:2.40.50.140 39 154 1.1E-74 T 13-10-2018 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 SUPERFAMILY SSF46955 403 475 8.33E-21 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 2.5E-290 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 2.2E-28 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 Gene3D G3DSA:3.50.40.10 197 395 2.7E-82 T 13-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 SUPERFAMILY SSF50249 35 196 2.69E-51 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 48.372 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 Gene3D G3DSA:3.30.930.10 485 693 3.0E-63 T 13-10-2018 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 SMART SM00874 403 471 2.7E-31 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 SUPERFAMILY SSF56037 199 396 6.54E-77 T 13-10-2018 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 5.5E-21 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 Gene3D G3DSA:3.30.56.10 401 475 1.1E-28 T 13-10-2018 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 Gene3D G3DSA:3.30.70.380 702 795 1.0E-31 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.8E-26 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Y11_07901 e9bbd231d76c59bff70898e031b57d53 795 Pfam PF03483 B3/4 domain 212 385 8.1E-71 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Y11_39071 02ae66ac58055c5f89fd91c7ac1cf29f 306 Gene3D G3DSA:3.30.1490.20 111 183 3.1E-86 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Y11_39071 02ae66ac58055c5f89fd91c7ac1cf29f 306 Gene3D G3DSA:3.40.50.20 1 84 2.1E-32 T 13-10-2018 Y11_39071 02ae66ac58055c5f89fd91c7ac1cf29f 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 302 2.3E-68 T 13-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_39071 02ae66ac58055c5f89fd91c7ac1cf29f 306 SUPERFAMILY SSF52440 3 96 2.88E-29 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Y11_39071 02ae66ac58055c5f89fd91c7ac1cf29f 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 36.687 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_39071 02ae66ac58055c5f89fd91c7ac1cf29f 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 2.0E-17 T 13-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_39071 02ae66ac58055c5f89fd91c7ac1cf29f 306 Gene3D G3DSA:3.30.470.20 85 301 3.1E-86 T 13-10-2018 Y11_39071 02ae66ac58055c5f89fd91c7ac1cf29f 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_39071 02ae66ac58055c5f89fd91c7ac1cf29f 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_39071 02ae66ac58055c5f89fd91c7ac1cf29f 306 SUPERFAMILY SSF56059 97 302 1.43E-58 T 13-10-2018 Y11_39071 02ae66ac58055c5f89fd91c7ac1cf29f 306 PIRSF PIRSF039102 41 306 3.5E-94 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_39071 02ae66ac58055c5f89fd91c7ac1cf29f 306 PIRSF PIRSF039102 1 47 2.1E-7 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_39071 02ae66ac58055c5f89fd91c7ac1cf29f 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 9.2E-109 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 Gene3D G3DSA:1.20.210.10 30 566 3.6E-190 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 13-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 SUPERFAMILY SSF81442 43 560 1.83E-179 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 1.6E-135 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 7.5E-96 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 7.5E-96 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 7.5E-96 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 7.5E-96 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 7.5E-96 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 7.5E-96 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 7.5E-96 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 7.5E-96 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 7.5E-96 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 7.5E-96 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 7.5E-96 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 7.5E-96 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20621 65a7bd5e81c391b419eceba50e01df0a 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_25901 ef329e5693c079a5cc8a4531f1f713c0 129 Gene3D G3DSA:3.30.70.260 33 113 3.6E-33 T 13-10-2018 Y11_25901 ef329e5693c079a5cc8a4531f1f713c0 129 Pfam PF13721 SecD export protein N-terminal TM region 11 106 1.1E-20 T 13-10-2018 IPR027398 SecD export protein N-terminal TM domain Y11_25901 ef329e5693c079a5cc8a4531f1f713c0 129 Hamap MF_00904 Modulator protein MzrA [mzrA]. 10 119 26.124 T 13-10-2018 IPR026574 Modulator protein MzrA Y11_09221 a50d68a9035a65a420ca01ae8ff98483 48 Gene3D G3DSA:1.20.1250.20 1 48 4.2E-6 T 13-10-2018 Y11_17331 63b847d8ad79b343843be02a2de33a46 251 SUPERFAMILY SSF69572 4 249 7.32E-84 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Y11_17331 63b847d8ad79b343843be02a2de33a46 251 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 10 248 2.8E-120 T 13-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 Y11_17331 63b847d8ad79b343843be02a2de33a46 251 Gene3D G3DSA:3.40.50.720 5 251 1.8E-86 T 13-10-2018 Y11_17331 63b847d8ad79b343843be02a2de33a46 251 Pfam PF00899 ThiF family 13 246 3.1E-61 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Y11_41571 0ff5fd212e9c0b0454ecfb1c029e7064 78 Pfam PF00462 Glutaredoxin 3 61 2.5E-14 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Y11_41571 0ff5fd212e9c0b0454ecfb1c029e7064 78 Gene3D G3DSA:3.40.30.10 1 78 3.3E-28 T 13-10-2018 Y11_41571 0ff5fd212e9c0b0454ecfb1c029e7064 78 SUPERFAMILY SSF52833 1 71 9.54E-19 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_41571 0ff5fd212e9c0b0454ecfb1c029e7064 78 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 73 5.3E-34 T 13-10-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 Y11_02911 aa6b179fd652fef268954bc847c8f31d 164 SUPERFAMILY SSF51069 24 156 6.54E-41 T 13-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Y11_02911 aa6b179fd652fef268954bc847c8f31d 164 SMART SM01057 25 164 4.6E-25 T 13-10-2018 IPR001148 Alpha carbonic anhydrase domain Y11_02911 aa6b179fd652fef268954bc847c8f31d 164 Gene3D G3DSA:3.10.200.10 22 163 1.8E-44 T 13-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Y11_02911 aa6b179fd652fef268954bc847c8f31d 164 Pfam PF00194 Eukaryotic-type carbonic anhydrase 24 155 1.7E-21 T 13-10-2018 IPR001148 Alpha carbonic anhydrase domain Y11_02911 aa6b179fd652fef268954bc847c8f31d 164 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 114 130 - T 13-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 Y11_30411 894f79de5b52c02d6f26c8bc415d73dd 75 SUPERFAMILY SSF89447 3 68 2.54E-10 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Y11_30411 894f79de5b52c02d6f26c8bc415d73dd 75 SMART SM00966 7 48 2.6E-4 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Y11_30411 894f79de5b52c02d6f26c8bc415d73dd 75 Gene3D G3DSA:2.10.260.10 1 74 9.0E-17 T 13-10-2018 Y11_30411 894f79de5b52c02d6f26c8bc415d73dd 75 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 50 8.7E-9 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Y11_06451 3576e156f02b7cc282484717ddc4beae 220 Gene3D G3DSA:3.30.420.10 3 174 1.4E-43 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_06451 3576e156f02b7cc282484717ddc4beae 220 SMART SM00479 2 157 4.3E-30 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Y11_06451 3576e156f02b7cc282484717ddc4beae 220 Pfam PF00929 Exonuclease 5 148 3.6E-11 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Y11_06451 3576e156f02b7cc282484717ddc4beae 220 SUPERFAMILY SSF53098 1 194 1.99E-31 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_13891 28bd82171af2eb5f51cb14f9c7c5be74 397 SUPERFAMILY SSF53098 14 371 4.48E-38 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_13891 28bd82171af2eb5f51cb14f9c7c5be74 397 Pfam PF01609 Transposase DDE domain 104 323 1.6E-20 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Y11_07431 38b099b37981a42e6a83e1e339d63d4c 388 Gene3D G3DSA:2.130.10.10 1 388 1.7E-171 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Y11_07431 38b099b37981a42e6a83e1e339d63d4c 388 SUPERFAMILY SSF82171 15 381 2.62E-31 T 13-10-2018 Y11_07431 38b099b37981a42e6a83e1e339d63d4c 388 Pfam PF14583 Oligogalacturonate lyase 1 386 1.7E-257 T 13-10-2018 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6 Y11_29271 8280121dae6b090cfd3180d5ada1c7ac 228 Gene3D G3DSA:1.10.10.10 145 211 9.1E-12 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_29271 8280121dae6b090cfd3180d5ada1c7ac 228 Gene3D G3DSA:3.30.450.20 1 128 5.7E-6 T 13-10-2018 Y11_29271 8280121dae6b090cfd3180d5ada1c7ac 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 2.4E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_29271 8280121dae6b090cfd3180d5ada1c7ac 228 Pfam PF08448 PAS fold 16 125 1.5E-10 T 13-10-2018 IPR013656 PAS fold-4 Y11_29271 8280121dae6b090cfd3180d5ada1c7ac 228 SUPERFAMILY SSF46894 139 210 4.42E-14 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_29271 8280121dae6b090cfd3180d5ada1c7ac 228 SMART SM00421 148 205 1.2E-4 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_17481 a0ee1fbc7915bcedf8dca58d78535027 88 Gene3D G3DSA:1.20.120.910 1 73 4.3E-21 T 13-10-2018 Y11_17481 a0ee1fbc7915bcedf8dca58d78535027 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 68 1.8E-11 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Y11_17481 a0ee1fbc7915bcedf8dca58d78535027 88 SUPERFAMILY SSF57716 38 73 7.84E-6 T 13-10-2018 Y11_41381 dd5b93cf79dc3df1e10d28fbe28cb6c4 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 3.2E-46 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Y11_41381 dd5b93cf79dc3df1e10d28fbe28cb6c4 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 3.2E-46 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Y11_41381 dd5b93cf79dc3df1e10d28fbe28cb6c4 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 3.2E-46 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Y11_41381 dd5b93cf79dc3df1e10d28fbe28cb6c4 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 3.2E-46 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Y11_41381 dd5b93cf79dc3df1e10d28fbe28cb6c4 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 3.2E-46 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Y11_41381 dd5b93cf79dc3df1e10d28fbe28cb6c4 267 PIRSF PIRSF000097 1 265 1.4E-66 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Y11_41381 dd5b93cf79dc3df1e10d28fbe28cb6c4 267 SUPERFAMILY SSF51430 2 259 1.2E-79 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Y11_41381 dd5b93cf79dc3df1e10d28fbe28cb6c4 267 Gene3D G3DSA:3.20.20.100 1 267 2.6E-90 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Y11_41381 dd5b93cf79dc3df1e10d28fbe28cb6c4 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Y11_41381 dd5b93cf79dc3df1e10d28fbe28cb6c4 267 Pfam PF00248 Aldo/keto reductase family 10 250 3.9E-50 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain Y11_41381 dd5b93cf79dc3df1e10d28fbe28cb6c4 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Y11_26461 9eb71ed2bd27480a7cf94ac8e58f74f2 169 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 7 159 5.4E-69 T 13-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Y11_26461 9eb71ed2bd27480a7cf94ac8e58f74f2 169 Pfam PF08282 haloacid dehalogenase-like hydrolase 76 143 1.1E-9 T 13-10-2018 Y11_26461 9eb71ed2bd27480a7cf94ac8e58f74f2 169 SUPERFAMILY SSF56784 3 161 1.06E-41 T 13-10-2018 IPR036412 HAD-like superfamily Y11_26461 9eb71ed2bd27480a7cf94ac8e58f74f2 169 PIRSF PIRSF006118 1 169 1.3E-71 T 13-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Y11_26461 9eb71ed2bd27480a7cf94ac8e58f74f2 169 Gene3D G3DSA:3.40.50.1000 1 169 3.2E-57 T 13-10-2018 IPR023214 HAD superfamily Y11_39931 461a625bd78c157db064391aa61b592c 145 Pfam PF13924 Lipocalin-like domain 7 143 6.8E-43 T 13-10-2018 IPR024311 Lipocalin-like domain Y11_26701 2485b6ed445a77305772c4d54bc7f0de 642 Gene3D G3DSA:1.10.1790.10 298 394 7.9E-19 T 13-10-2018 Y11_26701 2485b6ed445a77305772c4d54bc7f0de 642 Gene3D G3DSA:3.40.930.10 499 635 1.7E-18 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Y11_26701 2485b6ed445a77305772c4d54bc7f0de 642 SUPERFAMILY SSF55804 495 634 1.74E-25 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Y11_26701 2485b6ed445a77305772c4d54bc7f0de 642 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 504 633 5.9E-19 T 13-10-2018 IPR002178 PTS EIIA type-2 domain Y11_26701 2485b6ed445a77305772c4d54bc7f0de 642 SUPERFAMILY SSF52794 406 483 1.26E-8 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Y11_26701 2485b6ed445a77305772c4d54bc7f0de 642 Pfam PF08279 HTH domain 17 63 3.5E-7 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 Y11_26701 2485b6ed445a77305772c4d54bc7f0de 642 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 40 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Y11_26701 2485b6ed445a77305772c4d54bc7f0de 642 Pfam PF05043 Mga helix-turn-helix domain 84 165 3.7E-13 T 13-10-2018 IPR007737 Mga helix-turn-helix domain Y11_26701 2485b6ed445a77305772c4d54bc7f0de 642 Gene3D G3DSA:1.10.10.10 8 153 1.7E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_26701 2485b6ed445a77305772c4d54bc7f0de 642 Gene3D G3DSA:3.40.50.2300 405 491 3.6E-5 T 13-10-2018 Y11_26701 2485b6ed445a77305772c4d54bc7f0de 642 Pfam PF00874 PRD domain 305 391 5.4E-21 T 13-10-2018 IPR011608 PRD domain GO:0006355 Y11_26701 2485b6ed445a77305772c4d54bc7f0de 642 SUPERFAMILY SSF63520 297 396 2.75E-23 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 Y11_42731 39070d87428fcc05be3fa083a5e2ee1b 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 38.858 T 13-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 Y11_42731 39070d87428fcc05be3fa083a5e2ee1b 107 Gene3D G3DSA:2.60.300.12 2 107 8.7E-37 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Y11_42731 39070d87428fcc05be3fa083a5e2ee1b 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.5E-25 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Y11_42731 39070d87428fcc05be3fa083a5e2ee1b 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 5.6E-58 T 13-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 Y11_42731 39070d87428fcc05be3fa083a5e2ee1b 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 7.0E-37 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Y11_42731 39070d87428fcc05be3fa083a5e2ee1b 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Y11_42731 39070d87428fcc05be3fa083a5e2ee1b 107 SUPERFAMILY SSF89360 1 95 3.66E-33 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Y11_41881 589fa024046168a427490b49fc87343c 327 Hamap MF_01384 Urease accessory protein UreD [ureD]. 44 312 23.245 T 13-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 Y11_41881 589fa024046168a427490b49fc87343c 327 Pfam PF01774 UreD urease accessory protein 88 301 4.0E-42 T 13-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 Y11_20391 70eb157966fa0ccc6e1de75f03e8f716 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Y11_20391 70eb157966fa0ccc6e1de75f03e8f716 112 SUPERFAMILY SSF54913 1 112 2.13E-42 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Y11_20391 70eb157966fa0ccc6e1de75f03e8f716 112 SMART SM00938 4 105 5.9E-61 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Y11_20391 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 83 103 3.1E-41 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Y11_20391 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 2 17 3.1E-41 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Y11_20391 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 23 41 3.1E-41 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Y11_20391 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 52 75 3.1E-41 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Y11_20391 70eb157966fa0ccc6e1de75f03e8f716 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.8E-41 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Y11_20391 70eb157966fa0ccc6e1de75f03e8f716 112 Gene3D G3DSA:3.30.70.120 1 112 9.8E-45 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Y11_20391 70eb157966fa0ccc6e1de75f03e8f716 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Y11_20391 70eb157966fa0ccc6e1de75f03e8f716 112 PIRSF PIRSF039144 1 112 4.9E-54 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Y11_38981 b3526afb204f6f7e25ffba6e4695d329 106 Pfam PF04999 Cell division protein FtsL 11 104 1.3E-33 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Y11_38981 b3526afb204f6f7e25ffba6e4695d329 106 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 103 16.801 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Y11_38981 b3526afb204f6f7e25ffba6e4695d329 106 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 22 103 3.8E-27 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Y11_38891 c100f67339db02bfbeb87eea6e732fc8 608 SUPERFAMILY SSF56801 17 606 7.06E-114 T 13-10-2018 Y11_38891 c100f67339db02bfbeb87eea6e732fc8 608 Pfam PF00501 AMP-binding enzyme 24 477 1.1E-94 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Y11_38891 c100f67339db02bfbeb87eea6e732fc8 608 Gene3D G3DSA:3.40.50.12780 327 468 2.9E-34 T 13-10-2018 Y11_38891 c100f67339db02bfbeb87eea6e732fc8 608 Gene3D G3DSA:3.40.50.12780 10 322 1.5E-55 T 13-10-2018 Y11_38891 c100f67339db02bfbeb87eea6e732fc8 608 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 13-10-2018 IPR020845 AMP-binding, conserved site Y11_30111 57b6c05443f7f6776c43e1da279dc4d0 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 2.9E-68 T 13-10-2018 Y11_30111 57b6c05443f7f6776c43e1da279dc4d0 269 SUPERFAMILY SSF56784 1 268 5.3E-77 T 13-10-2018 IPR036412 HAD-like superfamily Y11_30111 57b6c05443f7f6776c43e1da279dc4d0 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 7.2E-66 T 13-10-2018 IPR000150 Cof family GO:0016787 Y11_30111 57b6c05443f7f6776c43e1da279dc4d0 269 Gene3D G3DSA:3.30.1240.10 87 193 7.0E-94 T 13-10-2018 Y11_30111 57b6c05443f7f6776c43e1da279dc4d0 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 13-10-2018 Y11_30111 57b6c05443f7f6776c43e1da279dc4d0 269 Gene3D G3DSA:3.40.50.1000 5 265 7.0E-94 T 13-10-2018 IPR023214 HAD superfamily Y11_30111 57b6c05443f7f6776c43e1da279dc4d0 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 9.4E-29 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Y11_43201 a67153d43421d7a371003771dae40366 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Y11_43201 a67153d43421d7a371003771dae40366 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.2E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_43201 a67153d43421d7a371003771dae40366 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.2E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_43201 a67153d43421d7a371003771dae40366 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.2E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_43201 a67153d43421d7a371003771dae40366 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 5.2E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_43201 a67153d43421d7a371003771dae40366 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.2E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_43201 a67153d43421d7a371003771dae40366 259 SUPERFAMILY SSF51735 3 258 7.5E-63 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_43201 a67153d43421d7a371003771dae40366 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.8E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_43201 a67153d43421d7a371003771dae40366 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.8E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_43201 a67153d43421d7a371003771dae40366 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.8E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_43201 a67153d43421d7a371003771dae40366 259 Gene3D G3DSA:3.40.50.720 1 258 1.1E-61 T 13-10-2018 Y11_43201 a67153d43421d7a371003771dae40366 259 Pfam PF00106 short chain dehydrogenase 3 197 3.7E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_23801 17c27f87293c2062a010c54bb1792a91 467 Pfam PF00083 Sugar (and other) transporter 80 461 4.3E-29 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Y11_23801 17c27f87293c2062a010c54bb1792a91 467 SUPERFAMILY SSF103473 21 461 6.41E-65 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_23801 17c27f87293c2062a010c54bb1792a91 467 Gene3D G3DSA:1.20.1250.20 32 465 5.0E-63 T 13-10-2018 Y11_14791 9ada91f7eb5af6e6a8aa0dfe417ef213 70 Gene3D G3DSA:2.40.50.140 2 70 6.4E-31 T 13-10-2018 Y11_14791 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PRINTS PR00050 Cold shock protein signature 43 61 1.9E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_14791 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PRINTS PR00050 Cold shock protein signature 7 22 1.9E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_14791 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PRINTS PR00050 Cold shock protein signature 28 37 1.9E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_14791 9ada91f7eb5af6e6a8aa0dfe417ef213 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 13-10-2018 IPR019844 Cold-shock conserved site Y11_14791 9ada91f7eb5af6e6a8aa0dfe417ef213 70 SUPERFAMILY SSF50249 2 69 1.43E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_14791 9ada91f7eb5af6e6a8aa0dfe417ef213 70 SMART SM00357 6 70 1.1E-30 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Y11_14791 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PIRSF PIRSF002599 1 70 1.6E-26 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 Y11_14791 9ada91f7eb5af6e6a8aa0dfe417ef213 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 3.4E-33 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_00971 f2e67770c257b489feb9d821113b47ea 429 Gene3D G3DSA:2.60.120.330 12 429 1.0E-166 T 13-10-2018 IPR027443 Isopenicillin N synthase-like Y11_00971 f2e67770c257b489feb9d821113b47ea 429 Pfam PF07350 Protein of unknown function (DUF1479) 22 427 2.9E-146 T 13-10-2018 IPR010856 Protein of unknown function DUF1479 Y11_00971 f2e67770c257b489feb9d821113b47ea 429 SUPERFAMILY SSF51197 14 427 9.06E-156 T 13-10-2018 Y11_33541 73ea5160f12cdf110497d909d28a4485 119 Pfam PF06530 Phage antitermination protein Q 3 118 2.6E-29 T 13-10-2018 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 Y11_34161 9b4b423c5a2d6afe4f7f6774af931ad7 226 Pfam PF02592 Putative vitamin uptake transporter 43 199 1.9E-33 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 Y11_34161 9b4b423c5a2d6afe4f7f6774af931ad7 226 Hamap MF_02088 Probable queuosine precursor transporter. 7 217 15.409 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 Y11_34161 9b4b423c5a2d6afe4f7f6774af931ad7 226 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 3.2E-62 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 Y11_38241 23f15e97e6a7d6fea842ba154e189f34 175 SUPERFAMILY SSF52972 1 167 6.54E-56 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Y11_38241 23f15e97e6a7d6fea842ba154e189f34 175 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 170 3.2E-49 T 13-10-2018 IPR002786 Non-canonical purine NTP phosphatase Y11_38241 23f15e97e6a7d6fea842ba154e189f34 175 Pfam PF01931 Protein of unknown function DUF84 7 165 1.3E-51 T 13-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 Y11_38241 23f15e97e6a7d6fea842ba154e189f34 175 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 29.103 T 13-10-2018 IPR002786 Non-canonical purine NTP phosphatase Y11_38241 23f15e97e6a7d6fea842ba154e189f34 175 Gene3D G3DSA:3.90.950.10 1 174 1.5E-60 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Y11_25661 0822003fdd6d6d4a0d6711ffe7192a75 153 SUPERFAMILY SSF53383 8 146 7.7E-32 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_25661 0822003fdd6d6d4a0d6711ffe7192a75 153 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 33 144 1.1E-29 T 13-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Y11_25661 0822003fdd6d6d4a0d6711ffe7192a75 153 Gene3D G3DSA:3.40.640.10 66 153 1.3E-14 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_25141 67cb47331d4964dfd1a648cf708529c0 387 Pfam PF05954 Phage late control gene D protein (GPD) 67 367 6.2E-32 T 13-10-2018 Y11_25141 67cb47331d4964dfd1a648cf708529c0 387 SUPERFAMILY SSF69279 15 188 2.95E-26 T 13-10-2018 Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 ProSitePatterns PS01068 OmpA-like domain. 268 312 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 Pfam PF00691 OmpA family 233 326 6.7E-20 T 13-10-2018 IPR006665 OmpA-like domain Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 Pfam PF01389 OmpA-like transmembrane domain 23 205 4.6E-69 T 13-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 PRINTS PR01021 OMPA domain signature 281 297 1.8E-20 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 PRINTS PR01021 OMPA domain signature 234 256 1.8E-20 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 PRINTS PR01021 OMPA domain signature 266 281 1.8E-20 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 SUPERFAMILY SSF56925 22 205 2.88E-39 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 Gene3D G3DSA:3.30.1330.60 210 354 6.8E-55 T 13-10-2018 IPR036737 OmpA-like domain superfamily Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 Gene3D G3DSA:2.40.160.20 22 203 3.1E-68 T 13-10-2018 Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 SUPERFAMILY SSF103088 220 345 1.31E-32 T 13-10-2018 IPR036737 OmpA-like domain superfamily Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 PRINTS PR01022 Outer membrane protein A signature 113 129 1.2E-62 T 13-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 PRINTS PR01022 Outer membrane protein A signature 324 337 1.2E-62 T 13-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 PRINTS PR01022 Outer membrane protein A signature 222 237 1.2E-62 T 13-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 PRINTS PR01022 Outer membrane protein A signature 190 204 1.2E-62 T 13-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 PRINTS PR01022 Outer membrane protein A signature 251 270 1.2E-62 T 13-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 PRINTS PR01022 Outer membrane protein A signature 176 190 1.2E-62 T 13-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 Y11_04631 d642ad9554e975b4c059bde6cae751e0 357 PRINTS PR01022 Outer membrane protein A signature 290 309 1.2E-62 T 13-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 Y11_16921 b75e6e248ffafecb88c9f9edb9aacfae 406 Pfam PF07690 Major Facilitator Superfamily 11 347 1.7E-36 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_16921 b75e6e248ffafecb88c9f9edb9aacfae 406 Gene3D G3DSA:1.20.1250.20 6 387 2.1E-45 T 13-10-2018 Y11_16921 b75e6e248ffafecb88c9f9edb9aacfae 406 SUPERFAMILY SSF103473 11 392 3.92E-52 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_29961 974ec9eb1a8179190af0b718a03e5d6f 210 Gene3D G3DSA:1.10.3720.10 5 208 5.7E-44 T 13-10-2018 IPR035906 MetI-like superfamily Y11_29961 974ec9eb1a8179190af0b718a03e5d6f 210 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 187 1.2E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_29961 974ec9eb1a8179190af0b718a03e5d6f 210 SUPERFAMILY SSF161098 10 193 1.7E-42 T 13-10-2018 IPR035906 MetI-like superfamily Y11_36961 0354cab228aa88da1ee40e7fb84658d1 371 Pfam PF00005 ABC transporter 20 161 1.1E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_36961 0354cab228aa88da1ee40e7fb84658d1 371 Pfam PF08402 TOBE domain 287 358 1.3E-8 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Y11_36961 0354cab228aa88da1ee40e7fb84658d1 371 SUPERFAMILY SSF50331 236 366 1.7E-21 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Y11_36961 0354cab228aa88da1ee40e7fb84658d1 371 SMART SM00382 28 211 1.0E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_36961 0354cab228aa88da1ee40e7fb84658d1 371 SUPERFAMILY SSF52540 4 241 3.5E-84 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_36961 0354cab228aa88da1ee40e7fb84658d1 371 Gene3D G3DSA:2.40.50.940 222 359 3.9E-26 T 13-10-2018 Y11_36961 0354cab228aa88da1ee40e7fb84658d1 371 Gene3D G3DSA:3.40.50.300 4 221 2.4E-65 T 13-10-2018 Y11_36961 0354cab228aa88da1ee40e7fb84658d1 371 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_36961 0354cab228aa88da1ee40e7fb84658d1 371 Gene3D G3DSA:2.40.50.140 293 350 3.9E-26 T 13-10-2018 Y11_03661 b53529800162f24c3634a4ee20c2baab 359 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_03661 b53529800162f24c3634a4ee20c2baab 359 SUPERFAMILY SSF52540 1 239 2.32E-88 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_03661 b53529800162f24c3634a4ee20c2baab 359 Gene3D G3DSA:2.40.50.940 221 283 3.5E-11 T 13-10-2018 Y11_03661 b53529800162f24c3634a4ee20c2baab 359 Pfam PF00005 ABC transporter 18 159 4.3E-39 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_03661 b53529800162f24c3634a4ee20c2baab 359 Pfam PF08402 TOBE domain 277 357 1.4E-20 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Y11_03661 b53529800162f24c3634a4ee20c2baab 359 SMART SM00382 26 209 2.0E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_03661 b53529800162f24c3634a4ee20c2baab 359 Gene3D G3DSA:2.40.50.140 284 338 3.5E-11 T 13-10-2018 Y11_03661 b53529800162f24c3634a4ee20c2baab 359 SUPERFAMILY SSF50331 234 357 7.94E-18 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Y11_03661 b53529800162f24c3634a4ee20c2baab 359 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 32 357 8.8E-147 T 13-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 Y11_03661 b53529800162f24c3634a4ee20c2baab 359 Gene3D G3DSA:3.40.50.300 1 220 1.4E-70 T 13-10-2018 Y11_41481 ccb736db48e0c580a1a7d6d174801a9a 239 Gene3D G3DSA:3.40.50.150 52 177 8.8E-13 T 13-10-2018 Y11_41481 ccb736db48e0c580a1a7d6d174801a9a 239 SUPERFAMILY SSF53335 77 208 5.68E-15 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_41481 ccb736db48e0c580a1a7d6d174801a9a 239 Pfam PF08241 Methyltransferase domain 77 125 3.8E-9 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Y11_08021 828f4004fa1df2e0259fb93e436e76d3 554 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 11 239 5.1E-41 T 13-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 Y11_08021 828f4004fa1df2e0259fb93e436e76d3 554 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 3 553 43.23 T 13-10-2018 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 Y11_36631 a4526fded23ab6095ea7f84f35d86ff4 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 4.0E-43 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Y11_36631 a4526fded23ab6095ea7f84f35d86ff4 97 SMART SM01103 3 86 2.5E-41 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Y11_36631 a4526fded23ab6095ea7f84f35d86ff4 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 3.5E-23 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Y11_36631 a4526fded23ab6095ea7f84f35d86ff4 97 Gene3D G3DSA:3.30.110.60 1 97 3.1E-37 T 13-10-2018 IPR035920 YhbY-like superfamily Y11_36631 a4526fded23ab6095ea7f84f35d86ff4 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 94 9.7E-39 T 13-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 Y11_36631 a4526fded23ab6095ea7f84f35d86ff4 97 SUPERFAMILY SSF75471 1 96 1.57E-31 T 13-10-2018 IPR035920 YhbY-like superfamily Y11_38911 7e67e1231d81348e6e550f522df32b27 575 Gene3D G3DSA:3.40.50.970 364 562 4.7E-68 T 13-10-2018 Y11_38911 7e67e1231d81348e6e550f522df32b27 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 1.7E-46 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Y11_38911 7e67e1231d81348e6e550f522df32b27 575 SUPERFAMILY SSF52518 2 180 1.07E-66 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_38911 7e67e1231d81348e6e550f522df32b27 575 Gene3D G3DSA:3.40.50.1220 190 360 4.7E-61 T 13-10-2018 Y11_38911 7e67e1231d81348e6e550f522df32b27 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 171 9.1E-60 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Y11_38911 7e67e1231d81348e6e550f522df32b27 575 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Y11_38911 7e67e1231d81348e6e550f522df32b27 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 546 6.2E-50 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Y11_38911 7e67e1231d81348e6e550f522df32b27 575 SUPERFAMILY SSF52467 188 362 1.59E-63 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Y11_38911 7e67e1231d81348e6e550f522df32b27 575 SUPERFAMILY SSF52518 371 568 6.08E-69 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Y11_38911 7e67e1231d81348e6e550f522df32b27 575 Gene3D G3DSA:3.40.50.970 1 180 1.2E-72 T 13-10-2018 Y11_38911 7e67e1231d81348e6e550f522df32b27 575 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 570 1.3E-277 T 13-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Y11_23041 3a7f97db6657f08e8f261c2588853cfc 220 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.062 T 13-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Y11_23041 3a7f97db6657f08e8f261c2588853cfc 220 Gene3D G3DSA:3.40.50.1360 7 207 6.2E-76 T 13-10-2018 Y11_23041 3a7f97db6657f08e8f261c2588853cfc 220 Gene3D G3DSA:3.30.70.260 125 196 6.2E-76 T 13-10-2018 Y11_23041 3a7f97db6657f08e8f261c2588853cfc 220 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 4.5E-70 T 13-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Y11_23041 3a7f97db6657f08e8f261c2588853cfc 220 SUPERFAMILY SSF100950 1 146 1.3E-47 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_23041 3a7f97db6657f08e8f261c2588853cfc 220 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 4.1E-59 T 13-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Y11_23041 3a7f97db6657f08e8f261c2588853cfc 220 SUPERFAMILY SSF75445 127 198 1.06E-23 T 13-10-2018 Y11_17741 5878d53b1269a983275ce63429844861 384 Gene3D G3DSA:1.10.3720.10 167 378 8.4E-31 T 13-10-2018 IPR035906 MetI-like superfamily Y11_17741 5878d53b1269a983275ce63429844861 384 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 375 6.1E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_17741 5878d53b1269a983275ce63429844861 384 SUPERFAMILY SSF161098 172 371 3.4E-34 T 13-10-2018 IPR035906 MetI-like superfamily Y11_01981 73633418b37fa94aae207ce8988674d1 263 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 256 2.6E-6 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_01981 73633418b37fa94aae207ce8988674d1 263 Pfam PF01548 Transposase 16 156 7.6E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_13011 c434ff1e3550c6422da67e1882937bd0 307 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 20 305 1.8E-64 T 13-10-2018 IPR010106 Recombination-promoting nuclease RpnA Y11_13011 c434ff1e3550c6422da67e1882937bd0 307 Pfam PF04754 Putative transposase, YhgA-like 19 220 1.7E-88 T 13-10-2018 IPR006842 Transposase (putative), YhgA-like Y11_15601 2951b8aec97e5bbdbb147c8c3c93808a 275 Pfam PF07024 ImpE protein 144 260 4.1E-41 T 13-10-2018 IPR009211 Predicted virulence protein, SciE type Y11_15601 2951b8aec97e5bbdbb147c8c3c93808a 275 SUPERFAMILY SSF144059 5 266 3.79E-84 T 13-10-2018 Y11_15601 2951b8aec97e5bbdbb147c8c3c93808a 275 Gene3D G3DSA:1.25.40.10 6 89 2.0E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_15601 2951b8aec97e5bbdbb147c8c3c93808a 275 PIRSF PIRSF029288 1 267 2.8E-90 T 13-10-2018 IPR009211 Predicted virulence protein, SciE type Y11_01721 d60cd00686e13b900b72cbbb70a9259b 485 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 2.4E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_01721 d60cd00686e13b900b72cbbb70a9259b 485 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 2.4E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_01721 d60cd00686e13b900b72cbbb70a9259b 485 SUPERFAMILY SSF46785 6 80 5.73E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_01721 d60cd00686e13b900b72cbbb70a9259b 485 Gene3D G3DSA:3.40.640.10 153 371 3.7E-111 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_01721 d60cd00686e13b900b72cbbb70a9259b 485 SMART SM00345 17 76 4.8E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_01721 d60cd00686e13b900b72cbbb70a9259b 485 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 1.0E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_01721 d60cd00686e13b900b72cbbb70a9259b 485 Gene3D G3DSA:3.90.1150.10 116 478 3.7E-111 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_01721 d60cd00686e13b900b72cbbb70a9259b 485 Pfam PF00155 Aminotransferase class I and II 145 474 2.5E-28 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_01721 d60cd00686e13b900b72cbbb70a9259b 485 Gene3D G3DSA:1.10.10.10 4 77 9.7E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_01721 d60cd00686e13b900b72cbbb70a9259b 485 SUPERFAMILY SSF53383 96 480 2.09E-95 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_39121 eab7e2dd2b4507ec7d44caaee28a75ef 174 Pfam PF05258 Protein of unknown function (DUF721) 26 98 1.2E-13 T 13-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 Y11_36491 139d7217ceaa957d43179dc2e4d6d79a 461 SUPERFAMILY SSF53623 95 308 3.27E-49 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Y11_36491 139d7217ceaa957d43179dc2e4d6d79a 461 Gene3D G3DSA:3.90.190.20 314 451 2.4E-28 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Y11_36491 139d7217ceaa957d43179dc2e4d6d79a 461 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 5.6E-9 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Y11_36491 139d7217ceaa957d43179dc2e4d6d79a 461 SUPERFAMILY SSF53244 312 448 1.1E-34 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Y11_36491 139d7217ceaa957d43179dc2e4d6d79a 461 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 58.951 T 13-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 Y11_36491 139d7217ceaa957d43179dc2e4d6d79a 461 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 1.3E-255 T 13-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 Y11_36491 139d7217ceaa957d43179dc2e4d6d79a 461 Pfam PF08245 Mur ligase middle domain 108 291 3.4E-18 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Y11_36491 139d7217ceaa957d43179dc2e4d6d79a 461 Gene3D G3DSA:3.40.50.720 1 90 4.6E-36 T 13-10-2018 Y11_36491 139d7217ceaa957d43179dc2e4d6d79a 461 Pfam PF01225 Mur ligase family, catalytic domain 2 98 7.2E-19 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Y11_36491 139d7217ceaa957d43179dc2e4d6d79a 461 Gene3D G3DSA:3.40.1190.10 91 313 3.4E-51 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Y11_36491 139d7217ceaa957d43179dc2e4d6d79a 461 SUPERFAMILY SSF51984 1 90 5.76E-24 T 13-10-2018 Y11_39161 0803c3cbf5644149920e06f15f303032 68 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 18.179 T 13-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 Y11_39161 0803c3cbf5644149920e06f15f303032 68 Pfam PF03884 DNA gyrase inhibitor YacG 8 58 4.8E-24 T 13-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 Y11_39161 0803c3cbf5644149920e06f15f303032 68 Gene3D G3DSA:3.30.50.10 2 65 2.2E-25 T 13-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 Y11_39161 0803c3cbf5644149920e06f15f303032 68 SUPERFAMILY SSF57716 6 63 3.99E-21 T 13-10-2018 Y11_02321 dd6196141e871e2a8014b159905c70b3 176 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 165 3.6E-64 T 13-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 Y11_02321 dd6196141e871e2a8014b159905c70b3 176 Pfam PF01202 Shikimate kinase 12 130 8.8E-11 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Y11_02321 dd6196141e871e2a8014b159905c70b3 176 SUPERFAMILY SSF52540 2 166 1.75E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_02321 dd6196141e871e2a8014b159905c70b3 176 Gene3D G3DSA:3.40.50.300 2 168 1.8E-63 T 13-10-2018 Y11_40721 201ff2b02d8037119b6f7cc8822ad30f 155 Pfam PF10713 Protein of unknown function (DUF2509) 18 154 2.3E-44 T 13-10-2018 IPR019652 Protein of unknown function DUF2509 Y11_05061 ccd63e275100e65ba28cb2d282dc87de 586 Gene3D G3DSA:1.10.287.130 329 416 1.1E-14 T 13-10-2018 Y11_05061 ccd63e275100e65ba28cb2d282dc87de 586 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 470 572 1.1E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_05061 ccd63e275100e65ba28cb2d282dc87de 586 SUPERFAMILY SSF47384 345 417 3.14E-8 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Y11_05061 ccd63e275100e65ba28cb2d282dc87de 586 Gene3D G3DSA:3.40.190.10 24 257 4.9E-16 T 13-10-2018 Y11_05061 ccd63e275100e65ba28cb2d282dc87de 586 SUPERFAMILY SSF53850 62 211 2.58E-12 T 13-10-2018 Y11_05061 ccd63e275100e65ba28cb2d282dc87de 586 Gene3D G3DSA:3.40.190.10 112 230 4.9E-16 T 13-10-2018 Y11_05061 ccd63e275100e65ba28cb2d282dc87de 586 SUPERFAMILY SSF55874 430 574 1.7E-22 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_05061 ccd63e275100e65ba28cb2d282dc87de 586 Gene3D G3DSA:3.30.565.10 430 579 6.8E-21 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_05061 ccd63e275100e65ba28cb2d282dc87de 586 SMART SM00387 466 574 2.2E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Y11_05061 ccd63e275100e65ba28cb2d282dc87de 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 515 1.8E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_05061 ccd63e275100e65ba28cb2d282dc87de 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 529 1.8E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_05061 ccd63e275100e65ba28cb2d282dc87de 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 548 1.8E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Y11_05061 ccd63e275100e65ba28cb2d282dc87de 586 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 24 257 2.1E-33 T 13-10-2018 Y11_05061 ccd63e275100e65ba28cb2d282dc87de 586 Pfam PF00512 His Kinase A (phospho-acceptor) domain 354 414 2.8E-6 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Y11_21631 ce52d0041ba4f9c517a6ef478c441029 256 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 1.5E-31 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Y11_21631 ce52d0041ba4f9c517a6ef478c441029 256 Gene3D G3DSA:3.60.110.10 1 256 1.1E-80 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Y11_21631 ce52d0041ba4f9c517a6ef478c441029 256 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 137 157 - T 13-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site Y11_21631 ce52d0041ba4f9c517a6ef478c441029 256 SUPERFAMILY SSF56317 2 249 4.84E-59 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Y11_31771 4f1f0f958d8c76c65cbfc623ded76fe2 170 PRINTS PR01100 Shikimate kinase family signature 6 21 2.5E-5 T 13-10-2018 Y11_31771 4f1f0f958d8c76c65cbfc623ded76fe2 170 PRINTS PR01100 Shikimate kinase family signature 100 117 2.5E-5 T 13-10-2018 Y11_31771 4f1f0f958d8c76c65cbfc623ded76fe2 170 SUPERFAMILY SSF52540 2 166 1.16E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_31771 4f1f0f958d8c76c65cbfc623ded76fe2 170 Gene3D G3DSA:3.40.50.300 2 170 3.8E-69 T 13-10-2018 Y11_31771 4f1f0f958d8c76c65cbfc623ded76fe2 170 Pfam PF01202 Shikimate kinase 12 166 4.4E-15 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Y11_31771 4f1f0f958d8c76c65cbfc623ded76fe2 170 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 164 3.7E-69 T 13-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 2.9E-6 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 2.9E-6 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 2.9E-6 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 2.9E-6 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 Gene3D G3DSA:1.10.490.10 1 142 1.4E-49 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 Gene3D G3DSA:2.40.30.10 149 254 1.1E-32 T 13-10-2018 Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 Pfam PF00042 Globin 7 102 3.1E-13 T 13-10-2018 IPR000971 Globin GO:0020037 Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 SUPERFAMILY SSF52343 255 395 2.36E-37 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 SUPERFAMILY SSF46458 1 142 7.32E-38 T 13-10-2018 IPR009050 Globin-like superfamily Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 6.4E-5 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 6.4E-5 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 358 366 6.4E-5 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 6.4E-5 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 56.852 T 13-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 SUPERFAMILY SSF63380 148 253 8.85E-29 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 Pfam PF00970 Oxidoreductase FAD-binding domain 156 252 1.9E-9 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 Gene3D G3DSA:3.40.50.80 256 396 1.3E-32 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Y11_42621 e66a7152f76a5f7cb39e6017afec36ec 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 371 2.1E-14 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Y11_15651 e61a92d80e15aeeb4081495954f21c66 458 Gene3D G3DSA:1.25.40.590 83 241 1.7E-42 T 13-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily Y11_15651 e61a92d80e15aeeb4081495954f21c66 458 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 401 418 3.6E-7 T 13-10-2018 Y11_15651 e61a92d80e15aeeb4081495954f21c66 458 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 439 458 3.6E-7 T 13-10-2018 Y11_15651 e61a92d80e15aeeb4081495954f21c66 458 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 419 438 3.6E-7 T 13-10-2018 Y11_15651 e61a92d80e15aeeb4081495954f21c66 458 SUPERFAMILY SSF103088 344 456 2.62E-29 T 13-10-2018 IPR036737 OmpA-like domain superfamily Y11_15651 e61a92d80e15aeeb4081495954f21c66 458 Pfam PF00691 OmpA family 352 450 3.0E-19 T 13-10-2018 IPR006665 OmpA-like domain Y11_15651 e61a92d80e15aeeb4081495954f21c66 458 Gene3D G3DSA:3.30.1330.60 311 457 4.0E-42 T 13-10-2018 IPR036737 OmpA-like domain superfamily Y11_15651 e61a92d80e15aeeb4081495954f21c66 458 Pfam PF09850 Type VI secretion system protein DotU 86 289 6.7E-49 T 13-10-2018 IPR017732 Type IV / VI secretion system, DotU Y11_15651 e61a92d80e15aeeb4081495954f21c66 458 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 320 456 1.5E-50 T 13-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain Y11_15651 e61a92d80e15aeeb4081495954f21c66 458 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 86 293 2.8E-60 T 13-10-2018 IPR017732 Type IV / VI secretion system, DotU Y11_37731 81441ff849a3bcf227734a58419cfce4 210 Gene3D G3DSA:1.25.40.340 1 209 7.6E-72 T 13-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Y11_37731 81441ff849a3bcf227734a58419cfce4 210 SMART SM01120 32 206 2.2E-81 T 13-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Y11_37731 81441ff849a3bcf227734a58419cfce4 210 SUPERFAMILY SSF101473 3 206 3.53E-58 T 13-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Y11_37731 81441ff849a3bcf227734a58419cfce4 210 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 2.3E-77 T 13-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 Y11_37731 81441ff849a3bcf227734a58419cfce4 210 Pfam PF02734 DAK2 domain 32 205 3.6E-55 T 13-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Y11_08751 a18891da299dde168aca62385de5bbab 465 PIRSF PIRSF019381 1 465 4.8E-220 T 13-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein Y11_08751 a18891da299dde168aca62385de5bbab 465 Pfam PF04317 YcjX-like family, DUF463 20 464 2.1E-188 T 13-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein Y11_14301 e58525ef47538890c1830d6f4a849595 250 Pfam PF00813 FliP family 53 244 1.6E-77 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_14301 e58525ef47538890c1830d6f4a849595 250 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 177 192 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_14301 e58525ef47538890c1830d6f4a849595 250 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 52 248 6.7E-93 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Y11_14301 e58525ef47538890c1830d6f4a849595 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 108 120 1.3E-31 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Y11_14301 e58525ef47538890c1830d6f4a849595 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 1.3E-31 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Y11_14301 e58525ef47538890c1830d6f4a849595 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 48 57 1.3E-31 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Y11_14301 e58525ef47538890c1830d6f4a849595 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 170 182 1.3E-31 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Y11_14301 e58525ef47538890c1830d6f4a849595 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 238 248 1.3E-31 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Y11_14301 e58525ef47538890c1830d6f4a849595 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 120 134 1.3E-31 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Y11_14301 e58525ef47538890c1830d6f4a849595 250 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 225 237 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_14301 e58525ef47538890c1830d6f4a849595 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 89 108 1.3E-67 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_14301 e58525ef47538890c1830d6f4a849595 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 177 197 1.3E-67 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_14301 e58525ef47538890c1830d6f4a849595 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 198 219 1.3E-67 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_14301 e58525ef47538890c1830d6f4a849595 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 222 247 1.3E-67 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_14301 e58525ef47538890c1830d6f4a849595 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 1.3E-67 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_14301 e58525ef47538890c1830d6f4a849595 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 69 89 1.3E-67 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_38931 540681bf20880de53c6bff56f8aecdc8 334 SUPERFAMILY SSF47413 2 58 2.31E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_38931 540681bf20880de53c6bff56f8aecdc8 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 1.3E-18 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_38931 540681bf20880de53c6bff56f8aecdc8 334 SMART SM00354 1 73 2.9E-31 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_38931 540681bf20880de53c6bff56f8aecdc8 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 3.6E-150 T 13-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 Y11_38931 540681bf20880de53c6bff56f8aecdc8 334 SUPERFAMILY SSF53822 60 314 5.5E-40 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_38931 540681bf20880de53c6bff56f8aecdc8 334 Gene3D G3DSA:3.40.50.2300 155 334 1.1E-28 T 13-10-2018 Y11_38931 540681bf20880de53c6bff56f8aecdc8 334 Gene3D G3DSA:3.40.50.2300 62 154 4.7E-25 T 13-10-2018 Y11_38931 540681bf20880de53c6bff56f8aecdc8 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 304 7.3E-15 T 13-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain Y11_38931 540681bf20880de53c6bff56f8aecdc8 334 Gene3D G3DSA:1.10.260.40 1 61 3.1E-28 T 13-10-2018 Y11_00701 0f149af0c86fb204465c71e039b37658 152 Pfam PF00486 Transcriptional regulatory protein, C terminal 75 151 4.8E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_00701 0f149af0c86fb204465c71e039b37658 152 SMART SM00862 75 151 1.9E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_00701 0f149af0c86fb204465c71e039b37658 152 Gene3D G3DSA:1.10.10.10 45 152 7.6E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_00701 0f149af0c86fb204465c71e039b37658 152 SUPERFAMILY SSF46894 52 151 4.54E-26 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_00701 0f149af0c86fb204465c71e039b37658 152 Gene3D G3DSA:3.40.50.2300 1 44 1.2E-12 T 13-10-2018 Y11_00701 0f149af0c86fb204465c71e039b37658 152 SUPERFAMILY SSF52172 1 42 9.66E-13 T 13-10-2018 IPR011006 CheY-like superfamily Y11_16771 6adfb5cb3c17900b7aaaf5e056815b91 312 Gene3D G3DSA:3.90.550.10 1 256 1.4E-33 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_16771 6adfb5cb3c17900b7aaaf5e056815b91 312 Pfam PF00535 Glycosyl transferase family 2 13 118 9.1E-16 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Y11_16771 6adfb5cb3c17900b7aaaf5e056815b91 312 SUPERFAMILY SSF53448 9 238 1.31E-40 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_19101 7da6425a98189b7d44123072ac641e39 525 Pfam PF00795 Carbon-nitrogen hydrolase 224 476 2.8E-36 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Y11_19101 7da6425a98189b7d44123072ac641e39 525 Gene3D G3DSA:3.60.110.10 214 483 1.6E-8 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Y11_19101 7da6425a98189b7d44123072ac641e39 525 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 496 24.327 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Y11_19101 7da6425a98189b7d44123072ac641e39 525 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 458 6.9E-105 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Y11_19101 7da6425a98189b7d44123072ac641e39 525 SUPERFAMILY SSF56317 217 491 9.55E-38 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Y11_04451 105767a7fbb0514a125d53414cddb34c 466 Gene3D G3DSA:2.40.50.140 2 104 1.9E-21 T 13-10-2018 Y11_04451 105767a7fbb0514a125d53414cddb34c 466 SUPERFAMILY SSF55681 99 464 5.38E-96 T 13-10-2018 Y11_04451 105767a7fbb0514a125d53414cddb34c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.2E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_04451 105767a7fbb0514a125d53414cddb34c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.2E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_04451 105767a7fbb0514a125d53414cddb34c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.2E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_04451 105767a7fbb0514a125d53414cddb34c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.2E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_04451 105767a7fbb0514a125d53414cddb34c 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.525 T 13-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 Y11_04451 105767a7fbb0514a125d53414cddb34c 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 8.8E-83 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_04451 105767a7fbb0514a125d53414cddb34c 466 SUPERFAMILY SSF50249 15 102 5.36E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_04451 105767a7fbb0514a125d53414cddb34c 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 7.8E-12 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Y11_04451 105767a7fbb0514a125d53414cddb34c 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 4.0E-209 T 13-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 Y11_04451 105767a7fbb0514a125d53414cddb34c 466 Gene3D G3DSA:3.30.930.10 109 465 1.9E-109 T 13-10-2018 Y11_35761 2a42cd10a6b9f279ed6f189b68cca227 330 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Y11_35761 2a42cd10a6b9f279ed6f189b68cca227 330 SUPERFAMILY SSF53686 10 321 5.63E-93 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y11_35761 2a42cd10a6b9f279ed6f189b68cca227 330 Gene3D G3DSA:3.40.50.1100 57 153 2.3E-124 T 13-10-2018 Y11_35761 2a42cd10a6b9f279ed6f189b68cca227 330 Gene3D G3DSA:3.40.50.1100 14 317 2.3E-124 T 13-10-2018 Y11_35761 2a42cd10a6b9f279ed6f189b68cca227 330 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 28 323 1.2E-118 T 13-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Y11_35761 2a42cd10a6b9f279ed6f189b68cca227 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 312 3.0E-78 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Y11_30121 e11c2f4ebf7656c4cffa2baa3ab92088 312 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 12 308 2.3E-60 T 13-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Y11_30121 e11c2f4ebf7656c4cffa2baa3ab92088 312 Gene3D G3DSA:3.30.1780.10 4 310 2.6E-75 T 13-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 Y11_30121 e11c2f4ebf7656c4cffa2baa3ab92088 312 Gene3D G3DSA:3.40.50.720 125 297 2.6E-75 T 13-10-2018 Y11_30121 e11c2f4ebf7656c4cffa2baa3ab92088 312 SUPERFAMILY SSF51735 1 310 2.04E-70 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_30121 e11c2f4ebf7656c4cffa2baa3ab92088 312 PIRSF PIRSF001439 1 311 6.8E-55 T 13-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Y11_38921 b8926b51cce76f3ffa73000e1ed2ba06 164 Gene3D G3DSA:3.30.70.260 1 80 1.2E-34 T 13-10-2018 Y11_38921 b8926b51cce76f3ffa73000e1ed2ba06 164 Pfam PF10369 Small subunit of acetolactate synthase 85 159 1.4E-23 T 13-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Y11_38921 b8926b51cce76f3ffa73000e1ed2ba06 164 Gene3D G3DSA:3.30.70.1150 81 158 5.7E-27 T 13-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Y11_38921 b8926b51cce76f3ffa73000e1ed2ba06 164 SUPERFAMILY SSF55021 3 75 1.16E-21 T 13-10-2018 Y11_38921 b8926b51cce76f3ffa73000e1ed2ba06 164 Pfam PF01842 ACT domain 5 69 7.1E-15 T 13-10-2018 IPR002912 ACT domain Y11_38921 b8926b51cce76f3ffa73000e1ed2ba06 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 77 8.0E-37 T 13-10-2018 Y11_38921 b8926b51cce76f3ffa73000e1ed2ba06 164 SUPERFAMILY SSF55021 80 163 4.43E-25 T 13-10-2018 Y11_38921 b8926b51cce76f3ffa73000e1ed2ba06 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 160 4.0E-66 T 13-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Y11_03401 e2631e40af7417d219ae503cde0b66f8 360 Pfam PF01032 FecCD transport family 43 355 8.7E-85 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Y11_03401 e2631e40af7417d219ae503cde0b66f8 360 Gene3D G3DSA:1.10.3470.10 27 359 1.8E-97 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_03401 e2631e40af7417d219ae503cde0b66f8 360 SUPERFAMILY SSF81345 24 355 3.27E-78 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_05121 679cb7d50eadc114b25fd88593745fc5 353 Pfam PF01594 AI-2E family transporter 14 327 1.5E-70 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like Y11_12121 04ae697276b94ff82fb651d4465c2ca7 219 Gene3D G3DSA:2.40.128.20 34 219 7.4E-77 T 13-10-2018 IPR012674 Calycin Y11_12121 04ae697276b94ff82fb651d4465c2ca7 219 SUPERFAMILY SSF50814 37 219 1.71E-69 T 13-10-2018 IPR012674 Calycin Y11_12121 04ae697276b94ff82fb651d4465c2ca7 219 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 41 219 8.6E-81 T 13-10-2018 IPR015304 ZinT domain GO:0008270 Y11_31871 89b81adc994cdcaec2edfdc8e661096d 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 2 477 4.4E-169 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Y11_31871 89b81adc994cdcaec2edfdc8e661096d 477 Hamap MF_00484 Glycogen synthase [glgA]. 2 477 46.018 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Y11_31871 89b81adc994cdcaec2edfdc8e661096d 477 Pfam PF00534 Glycosyl transferases group 1 290 449 5.3E-16 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Y11_31871 89b81adc994cdcaec2edfdc8e661096d 477 SUPERFAMILY SSF53756 4 477 3.0E-115 T 13-10-2018 Y11_31871 89b81adc994cdcaec2edfdc8e661096d 477 Gene3D G3DSA:3.40.50.2000 4 474 1.8E-188 T 13-10-2018 Y11_31871 89b81adc994cdcaec2edfdc8e661096d 477 Gene3D G3DSA:3.40.50.2000 250 459 1.8E-188 T 13-10-2018 Y11_31871 89b81adc994cdcaec2edfdc8e661096d 477 Pfam PF08323 Starch synthase catalytic domain 3 235 9.7E-71 T 13-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Y11_01701 16f5dec60c2917d300e3c3352fe2af53 241 Gene3D G3DSA:3.40.30.10 70 239 1.2E-43 T 13-10-2018 Y11_01701 16f5dec60c2917d300e3c3352fe2af53 241 Pfam PF13462 Thioredoxin 79 232 7.3E-20 T 13-10-2018 IPR012336 Thioredoxin-like fold Y11_01701 16f5dec60c2917d300e3c3352fe2af53 241 SUPERFAMILY SSF52833 68 233 3.86E-39 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_34341 d653dd31feaaecc7e2558cb266adb50d 428 Pfam PF02653 Branched-chain amino acid transport system / permease component 113 398 1.3E-56 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_34341 d653dd31feaaecc7e2558cb266adb50d 428 Pfam PF11862 Domain of unknown function (DUF3382) 5 103 7.0E-25 T 13-10-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal Y11_10091 9d6cfa5e4129774b7ba42686db2411f2 490 SUPERFAMILY SSF52540 257 468 1.87E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_10091 9d6cfa5e4129774b7ba42686db2411f2 490 ProSitePatterns PS00211 ABC transporters family signature. 379 393 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_10091 9d6cfa5e4129774b7ba42686db2411f2 490 Gene3D G3DSA:3.40.50.300 4 254 8.3E-60 T 13-10-2018 Y11_10091 9d6cfa5e4129774b7ba42686db2411f2 490 SMART SM00382 260 455 5.4E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_10091 9d6cfa5e4129774b7ba42686db2411f2 490 SMART SM00382 44 232 1.4E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_10091 9d6cfa5e4129774b7ba42686db2411f2 490 Pfam PF00005 ABC transporter 257 406 3.5E-17 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_10091 9d6cfa5e4129774b7ba42686db2411f2 490 Gene3D G3DSA:3.40.50.300 255 484 3.3E-40 T 13-10-2018 Y11_10091 9d6cfa5e4129774b7ba42686db2411f2 490 SUPERFAMILY SSF52540 18 238 7.77E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_10091 9d6cfa5e4129774b7ba42686db2411f2 490 Pfam PF00005 ABC transporter 35 184 1.1E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_11991 d1f779fb03f58a104ac8d21ca26877b5 260 Pfam PF03609 PTS system sorbose-specific iic component 5 236 5.8E-69 T 13-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 Y11_22721 467338f20f193e7db3fd9a7d1bb8136a 566 Pfam PF15864 Protein glycosylation ligase 184 209 5.6E-10 T 13-10-2018 IPR031726 Protein glycosylation ligase domain Y11_22721 467338f20f193e7db3fd9a7d1bb8136a 566 Pfam PF04932 O-Antigen ligase 224 364 7.4E-14 T 13-10-2018 IPR007016 O-antigen ligase-related Y11_22721 467338f20f193e7db3fd9a7d1bb8136a 566 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 385 564 1.3E-13 T 13-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal Y11_38821 99ee2bb57888999814dec301cc487ce1 230 Pfam PF01212 Beta-eliminating lyase 46 230 1.4E-57 T 13-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 Y11_38821 99ee2bb57888999814dec301cc487ce1 230 SUPERFAMILY SSF53383 2 230 1.3E-72 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_38821 99ee2bb57888999814dec301cc487ce1 230 Gene3D G3DSA:3.40.640.10 58 230 5.5E-65 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_01391 9739244ffaedd97180c36c0837b59a5c 406 Pfam PF14559 Tetratricopeptide repeat 175 242 8.2E-13 T 13-10-2018 Y11_01391 9739244ffaedd97180c36c0837b59a5c 406 Gene3D G3DSA:1.25.40.10 152 292 3.6E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_01391 9739244ffaedd97180c36c0837b59a5c 406 SUPERFAMILY SSF48452 162 266 2.86E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_01391 9739244ffaedd97180c36c0837b59a5c 406 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 112 2.7E-30 T 13-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI Y11_10491 8f321f7a4e80dcdd787d22e9b9c19eeb 108 PIRSF PIRSF037511 1 108 6.5E-36 T 13-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 Y11_10491 8f321f7a4e80dcdd787d22e9b9c19eeb 108 Pfam PF01253 Translation initiation factor SUI1 32 101 1.6E-18 T 13-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 Y11_10491 8f321f7a4e80dcdd787d22e9b9c19eeb 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 1.2E-37 T 13-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 Y11_10491 8f321f7a4e80dcdd787d22e9b9c19eeb 108 Gene3D G3DSA:3.30.780.10 28 108 5.4E-33 T 13-10-2018 Y11_10491 8f321f7a4e80dcdd787d22e9b9c19eeb 108 SUPERFAMILY SSF55159 4 104 5.23E-26 T 13-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 Y11_22251 30484b54d2aff053536c719403a18620 204 Pfam PF13247 4Fe-4S dicluster domain 58 151 1.9E-26 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_22251 30484b54d2aff053536c719403a18620 204 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 98 109 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_22251 30484b54d2aff053536c719403a18620 204 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 3 162 1.8E-77 T 13-10-2018 IPR014297 Dimethylsulphoxide reductase, chain B Y11_22251 30484b54d2aff053536c719403a18620 204 SUPERFAMILY SSF54862 1 199 1.15E-67 T 13-10-2018 Y11_22251 30484b54d2aff053536c719403a18620 204 Pfam PF12800 4Fe-4S binding domain 11 24 0.0022 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_22251 30484b54d2aff053536c719403a18620 204 Gene3D G3DSA:3.30.70.20 1 203 3.7E-52 T 13-10-2018 Y11_29081 5929772fe3661b83a6c92578a2544c6b 276 Gene3D G3DSA:3.60.15.10 1 273 5.6E-72 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_29081 5929772fe3661b83a6c92578a2544c6b 276 SMART SM00849 21 249 1.9E-4 T 13-10-2018 IPR001279 Metallo-beta-lactamase Y11_29081 5929772fe3661b83a6c92578a2544c6b 276 Pfam PF00753 Metallo-beta-lactamase superfamily 19 81 1.4E-11 T 13-10-2018 IPR001279 Metallo-beta-lactamase Y11_29081 5929772fe3661b83a6c92578a2544c6b 276 SUPERFAMILY SSF56281 4 266 5.9E-32 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_01821 3be7b8f2b9c2168de034529a18c24ea5 422 PIRSF PIRSF001563 5 422 2.4E-111 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Y11_01821 3be7b8f2b9c2168de034529a18c24ea5 422 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 52 75 - T 13-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Y11_01821 3be7b8f2b9c2168de034529a18c24ea5 422 Gene3D G3DSA:3.90.190.20 294 421 4.4E-39 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Y11_01821 3be7b8f2b9c2168de034529a18c24ea5 422 SUPERFAMILY SSF53623 13 290 1.18E-85 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Y11_01821 3be7b8f2b9c2168de034529a18c24ea5 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 293 343 4.4E-7 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Y11_01821 3be7b8f2b9c2168de034529a18c24ea5 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 13-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Y11_01821 3be7b8f2b9c2168de034529a18c24ea5 422 Gene3D G3DSA:3.40.1190.10 1 293 1.3E-97 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Y11_01821 3be7b8f2b9c2168de034529a18c24ea5 422 SUPERFAMILY SSF53244 292 418 3.66E-34 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Y11_01821 3be7b8f2b9c2168de034529a18c24ea5 422 Pfam PF08245 Mur ligase middle domain 54 195 1.1E-8 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Y11_01821 3be7b8f2b9c2168de034529a18c24ea5 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 418 4.9E-105 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Y11_16421 12abc07297a82118ad1a85a599d58bef 105 Pfam PF04363 Protein of unknown function (DUF496) 9 100 6.5E-46 T 13-10-2018 IPR007458 Protein of unknown function DUF496 Y11_16421 12abc07297a82118ad1a85a599d58bef 105 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 9 103 25.495 T 13-10-2018 IPR007458 Protein of unknown function DUF496 Y11_16421 12abc07297a82118ad1a85a599d58bef 105 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 12 99 1.0E-41 T 13-10-2018 IPR007458 Protein of unknown function DUF496 Y11_16421 12abc07297a82118ad1a85a599d58bef 105 PIRSF PIRSF028773 1 105 2.6E-49 T 13-10-2018 IPR007458 Protein of unknown function DUF496 Y11_40381 8a0c5e05399d939e4ac6e2f3d626dc6a 94 Gene3D G3DSA:3.30.1300.30 4 90 1.8E-11 T 13-10-2018 Y11_40381 8a0c5e05399d939e4ac6e2f3d626dc6a 94 Pfam PF02501 Type II secretion system (T2SS), protein I 14 90 2.4E-10 T 13-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 Y11_40381 8a0c5e05399d939e4ac6e2f3d626dc6a 94 SUPERFAMILY SSF54523 12 91 2.51E-16 T 13-10-2018 Y11_41231 e3e928614fa0cf3ade7d752428848600 84 Gene3D G3DSA:2.30.30.400 8 84 2.7E-32 T 13-10-2018 IPR038626 Rof-like superfamily Y11_41231 e3e928614fa0cf3ade7d752428848600 84 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 7 81 2.0E-28 T 13-10-2018 IPR009778 Modulator of Rho-dependent transcription termination Y11_41231 e3e928614fa0cf3ade7d752428848600 84 SUPERFAMILY SSF101744 2 82 8.37E-30 T 13-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 206 2.5E-79 T 13-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 448 2.6E-93 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 Gene3D G3DSA:3.30.950.10 331 470 8.0E-46 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 52.526 T 13-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 Gene3D G3DSA:1.10.8.210 149 209 4.1E-17 T 13-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 2.5E-7 T 13-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 Gene3D G3DSA:3.30.160.110 113 148 9.8E-19 T 13-10-2018 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 SUPERFAMILY SSF75615 114 210 2.22E-28 T 13-10-2018 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 SUPERFAMILY SSF51735 2 113 1.24E-26 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_22861 abc01a9988fc5762aabad46ec054b148 472 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 Pfam PF10414 Sirohaem synthase dimerisation region 150 205 1.1E-21 T 13-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 220 234 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 Gene3D G3DSA:3.40.50.720 1 112 1.0E-32 T 13-10-2018 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 426 2.9E-52 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 PIRSF PIRSF036426 1 465 1.5E-204 T 13-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 Gene3D G3DSA:3.40.1010.10 213 330 6.9E-46 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 SUPERFAMILY SSF53790 211 456 7.33E-81 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Y11_22861 abc01a9988fc5762aabad46ec054b148 472 Pfam PF13241 Putative NAD(P)-binding 6 115 1.6E-28 T 13-10-2018 Y11_36661 6a5b190a5222e5acc6ed95fada788176 277 SUPERFAMILY SSF51717 6 274 2.88E-106 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_36661 6a5b190a5222e5acc6ed95fada788176 277 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 271 8.8E-103 T 13-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Y11_36661 6a5b190a5222e5acc6ed95fada788176 277 Pfam PF00809 Pterin binding enzyme 18 257 4.4E-89 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_36661 6a5b190a5222e5acc6ed95fada788176 277 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_36661 6a5b190a5222e5acc6ed95fada788176 277 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_36661 6a5b190a5222e5acc6ed95fada788176 277 Gene3D G3DSA:3.20.20.20 1 276 8.7E-112 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Y11_21271 c010f43f150f642e44b46e4e4b3b4a41 367 SMART SM00359 276 359 9.2E-20 T 13-10-2018 IPR002478 PUA domain GO:0003723 Y11_21271 c010f43f150f642e44b46e4e4b3b4a41 367 SUPERFAMILY SSF53633 6 256 3.14E-65 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Y11_21271 c010f43f150f642e44b46e4e4b3b4a41 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 4.8E-57 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Y11_21271 c010f43f150f642e44b46e4e4b3b4a41 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 4.8E-57 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Y11_21271 c010f43f150f642e44b46e4e4b3b4a41 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 4.8E-57 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Y11_21271 c010f43f150f642e44b46e4e4b3b4a41 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 4.8E-57 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Y11_21271 c010f43f150f642e44b46e4e4b3b4a41 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 4.8E-57 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Y11_21271 c010f43f150f642e44b46e4e4b3b4a41 367 Gene3D G3DSA:2.30.130.10 266 367 1.3E-28 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 Y11_21271 c010f43f150f642e44b46e4e4b3b4a41 367 Gene3D G3DSA:3.40.1160.10 2 258 1.0E-87 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Y11_21271 c010f43f150f642e44b46e4e4b3b4a41 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 7.0E-152 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Y11_21271 c010f43f150f642e44b46e4e4b3b4a41 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 13-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Y11_21271 c010f43f150f642e44b46e4e4b3b4a41 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 263 35.981 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Y11_21271 c010f43f150f642e44b46e4e4b3b4a41 367 Pfam PF00696 Amino acid kinase family 6 234 1.7E-44 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Y11_21271 c010f43f150f642e44b46e4e4b3b4a41 367 Pfam PF01472 PUA domain 276 350 4.5E-20 T 13-10-2018 IPR002478 PUA domain GO:0003723 Y11_21271 c010f43f150f642e44b46e4e4b3b4a41 367 PIRSF PIRSF000729 1 367 3.2E-141 T 13-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Y11_21271 c010f43f150f642e44b46e4e4b3b4a41 367 SUPERFAMILY SSF88697 276 366 8.84E-23 T 13-10-2018 IPR015947 PUA-like superfamily Y11_20961 d99ef99e8c7cdc1803ac5de46a2fb347 587 SUPERFAMILY SSF56235 25 587 3.47E-184 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_20961 d99ef99e8c7cdc1803ac5de46a2fb347 587 Gene3D G3DSA:1.10.246.130 262 374 1.7E-41 T 13-10-2018 Y11_20961 d99ef99e8c7cdc1803ac5de46a2fb347 587 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 34 551 2.8E-174 T 13-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 Y11_20961 d99ef99e8c7cdc1803ac5de46a2fb347 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 440 455 2.3E-77 T 13-10-2018 Y11_20961 d99ef99e8c7cdc1803ac5de46a2fb347 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 56 81 2.3E-77 T 13-10-2018 Y11_20961 d99ef99e8c7cdc1803ac5de46a2fb347 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 276 295 2.3E-77 T 13-10-2018 Y11_20961 d99ef99e8c7cdc1803ac5de46a2fb347 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 147 2.3E-77 T 13-10-2018 Y11_20961 d99ef99e8c7cdc1803ac5de46a2fb347 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 166 2.3E-77 T 13-10-2018 Y11_20961 d99ef99e8c7cdc1803ac5de46a2fb347 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 375 393 2.3E-77 T 13-10-2018 Y11_20961 d99ef99e8c7cdc1803ac5de46a2fb347 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 399 417 2.3E-77 T 13-10-2018 Y11_20961 d99ef99e8c7cdc1803ac5de46a2fb347 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 464 481 2.3E-77 T 13-10-2018 Y11_20961 d99ef99e8c7cdc1803ac5de46a2fb347 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 246 262 2.3E-77 T 13-10-2018 Y11_20961 d99ef99e8c7cdc1803ac5de46a2fb347 587 Gene3D G3DSA:3.60.20.40 375 579 8.2E-68 T 13-10-2018 Y11_20961 d99ef99e8c7cdc1803ac5de46a2fb347 587 Pfam PF01019 Gamma-glutamyltranspeptidase 49 578 1.1E-181 T 13-10-2018 Y11_20961 d99ef99e8c7cdc1803ac5de46a2fb347 587 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 375 399 - T 13-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 Y11_32861 e8564acc03e332458277640c50f630f9 157 PIRSF PIRSF002560 1 157 4.7E-71 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Y11_32861 e8564acc03e332458277640c50f630f9 157 Pfam PF00210 Ferritin-like domain 8 143 8.3E-39 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Y11_32861 e8564acc03e332458277640c50f630f9 157 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 8.2E-80 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Y11_32861 e8564acc03e332458277640c50f630f9 157 PRINTS PR00601 Bacterioferritin signature 107 127 5.3E-75 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Y11_32861 e8564acc03e332458277640c50f630f9 157 PRINTS PR00601 Bacterioferritin signature 3 22 5.3E-75 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Y11_32861 e8564acc03e332458277640c50f630f9 157 PRINTS PR00601 Bacterioferritin signature 44 64 5.3E-75 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Y11_32861 e8564acc03e332458277640c50f630f9 157 PRINTS PR00601 Bacterioferritin signature 65 85 5.3E-75 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Y11_32861 e8564acc03e332458277640c50f630f9 157 PRINTS PR00601 Bacterioferritin signature 86 106 5.3E-75 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Y11_32861 e8564acc03e332458277640c50f630f9 157 PRINTS PR00601 Bacterioferritin signature 23 43 5.3E-75 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Y11_32861 e8564acc03e332458277640c50f630f9 157 PRINTS PR00601 Bacterioferritin signature 128 149 5.3E-75 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Y11_32861 e8564acc03e332458277640c50f630f9 157 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Y11_32861 e8564acc03e332458277640c50f630f9 157 SUPERFAMILY SSF47240 1 154 3.42E-53 T 13-10-2018 IPR009078 Ferritin-like superfamily Y11_32861 e8564acc03e332458277640c50f630f9 157 Gene3D G3DSA:1.20.1260.10 1 157 3.9E-71 T 13-10-2018 IPR012347 Ferritin-like Y11_32281 776ab15dbbdbfb6f910ceefd88e239f0 290 Gene3D G3DSA:3.30.1490.300 82 135 3.5E-11 T 13-10-2018 Y11_32281 776ab15dbbdbfb6f910ceefd88e239f0 290 Gene3D G3DSA:3.30.420.40 8 166 3.5E-11 T 13-10-2018 Y11_32281 776ab15dbbdbfb6f910ceefd88e239f0 290 SUPERFAMILY SSF53067 44 163 5.18E-5 T 13-10-2018 Y11_32281 776ab15dbbdbfb6f910ceefd88e239f0 290 Pfam PF11104 Type IV pilus assembly protein PilM; 9 165 1.6E-16 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM Y11_23691 479b6c9b792b6c7f96c87ac6e2763ed4 252 SMART SM00382 26 213 2.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_23691 479b6c9b792b6c7f96c87ac6e2763ed4 252 SUPERFAMILY SSF52540 1 225 1.85E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_23691 479b6c9b792b6c7f96c87ac6e2763ed4 252 Pfam PF00005 ABC transporter 17 164 3.3E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_23691 479b6c9b792b6c7f96c87ac6e2763ed4 252 Gene3D G3DSA:3.40.50.300 1 252 5.1E-65 T 13-10-2018 Y11_27371 a7814829d1c06b626ff271ee2726524f 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 6.0E-32 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_27371 a7814829d1c06b626ff271ee2726524f 341 Gene3D G3DSA:3.40.190.10 128 223 1.1E-52 T 13-10-2018 Y11_27371 a7814829d1c06b626ff271ee2726524f 341 Gene3D G3DSA:3.40.190.10 26 255 1.1E-52 T 13-10-2018 Y11_27371 a7814829d1c06b626ff271ee2726524f 341 SUPERFAMILY SSF53850 27 257 1.28E-48 T 13-10-2018 Y11_27371 a7814829d1c06b626ff271ee2726524f 341 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site Y11_27371 a7814829d1c06b626ff271ee2726524f 341 SMART SM00062 36 265 8.8E-58 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_04611 35096123f2acb0702ee92ae8a689e5da 540 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 447 465 7.7E-11 T 13-10-2018 Y11_04611 35096123f2acb0702ee92ae8a689e5da 540 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 304 320 7.7E-11 T 13-10-2018 Y11_04611 35096123f2acb0702ee92ae8a689e5da 540 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 387 406 7.7E-11 T 13-10-2018 Y11_04611 35096123f2acb0702ee92ae8a689e5da 540 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 417 436 7.7E-11 T 13-10-2018 Y11_04611 35096123f2acb0702ee92ae8a689e5da 540 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 390 490 1.8E-10 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Y11_04611 35096123f2acb0702ee92ae8a689e5da 540 Gene3D G3DSA:3.40.50.300 73 192 1.1E-13 T 13-10-2018 Y11_04611 35096123f2acb0702ee92ae8a689e5da 540 Pfam PF13654 AAA domain 89 278 2.7E-21 T 13-10-2018 Y11_04611 35096123f2acb0702ee92ae8a689e5da 540 Gene3D G3DSA:3.30.230.10 280 520 1.3E-96 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y11_04611 35096123f2acb0702ee92ae8a689e5da 540 SUPERFAMILY SSF54211 304 495 9.48E-36 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_18681 d7dc4190c3317c4cd9cacd54509afa92 243 Pfam PF06149 Protein of unknown function (DUF969) 7 224 2.9E-87 T 13-10-2018 IPR010374 Protein of unknown function DUF969 Y11_33351 353c1367d6bfe2d6a4d9eabc6f23c85a 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 315 2.2E-43 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_14101 588b0d6f316cfd9292259abc8958de27 253 SMART SM00342 147 229 1.1E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_14101 588b0d6f316cfd9292259abc8958de27 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 198 213 3.6E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_14101 588b0d6f316cfd9292259abc8958de27 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 213 229 3.6E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_14101 588b0d6f316cfd9292259abc8958de27 253 Pfam PF12833 Helix-turn-helix domain 154 229 3.0E-12 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_14101 588b0d6f316cfd9292259abc8958de27 253 SUPERFAMILY SSF46689 182 234 1.79E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_14101 588b0d6f316cfd9292259abc8958de27 253 Gene3D G3DSA:1.10.10.60 127 239 1.3E-19 T 13-10-2018 Y11_30801 6f9c06c4b52fa23ae8b10d220ab8c8eb 397 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 131 139 - T 13-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_30801 6f9c06c4b52fa23ae8b10d220ab8c8eb 397 PIRSF PIRSF001480 7 396 1.7E-95 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_30801 6f9c06c4b52fa23ae8b10d220ab8c8eb 397 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 9 388 3.3E-84 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_30801 6f9c06c4b52fa23ae8b10d220ab8c8eb 397 PRINTS PR00714 Phosphomannose isomerase type I signature 131 154 4.4E-62 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_30801 6f9c06c4b52fa23ae8b10d220ab8c8eb 397 PRINTS PR00714 Phosphomannose isomerase type I signature 12 30 4.4E-62 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_30801 6f9c06c4b52fa23ae8b10d220ab8c8eb 397 PRINTS PR00714 Phosphomannose isomerase type I signature 228 243 4.4E-62 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_30801 6f9c06c4b52fa23ae8b10d220ab8c8eb 397 PRINTS PR00714 Phosphomannose isomerase type I signature 263 282 4.4E-62 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_30801 6f9c06c4b52fa23ae8b10d220ab8c8eb 397 PRINTS PR00714 Phosphomannose isomerase type I signature 244 263 4.4E-62 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_30801 6f9c06c4b52fa23ae8b10d220ab8c8eb 397 PRINTS PR00714 Phosphomannose isomerase type I signature 40 55 4.4E-62 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_30801 6f9c06c4b52fa23ae8b10d220ab8c8eb 397 PRINTS PR00714 Phosphomannose isomerase type I signature 282 301 4.4E-62 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_30801 6f9c06c4b52fa23ae8b10d220ab8c8eb 397 PRINTS PR00714 Phosphomannose isomerase type I signature 88 109 4.4E-62 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_30801 6f9c06c4b52fa23ae8b10d220ab8c8eb 397 SUPERFAMILY SSF51182 8 381 1.41E-90 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_30801 6f9c06c4b52fa23ae8b10d220ab8c8eb 397 Gene3D G3DSA:2.60.120.10 309 389 2.7E-116 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_30801 6f9c06c4b52fa23ae8b10d220ab8c8eb 397 Gene3D G3DSA:2.60.120.10 14 283 2.7E-116 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_30801 6f9c06c4b52fa23ae8b10d220ab8c8eb 397 Gene3D G3DSA:1.10.441.10 155 308 2.7E-116 T 13-10-2018 Y11_30801 6f9c06c4b52fa23ae8b10d220ab8c8eb 397 Pfam PF01238 Phosphomannose isomerase type I 10 360 3.4E-77 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Y11_23291 aaf84ed4eb0db33ffb3a00c7f97388b1 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.4E-47 T 13-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Y11_23291 aaf84ed4eb0db33ffb3a00c7f97388b1 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 183.344 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Y11_23291 aaf84ed4eb0db33ffb3a00c7f97388b1 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.8E-80 T 13-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Y11_23291 aaf84ed4eb0db33ffb3a00c7f97388b1 317 Gene3D G3DSA:3.30.1490.20 137 201 5.4E-121 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Y11_23291 aaf84ed4eb0db33ffb3a00c7f97388b1 317 SUPERFAMILY SSF52440 2 122 3.16E-47 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Y11_23291 aaf84ed4eb0db33ffb3a00c7f97388b1 317 Gene3D G3DSA:3.40.50.20 7 114 5.4E-121 T 13-10-2018 Y11_23291 aaf84ed4eb0db33ffb3a00c7f97388b1 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 312 3.1E-139 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Y11_23291 aaf84ed4eb0db33ffb3a00c7f97388b1 317 SUPERFAMILY SSF56059 123 311 2.36E-57 T 13-10-2018 Y11_23291 aaf84ed4eb0db33ffb3a00c7f97388b1 317 Gene3D G3DSA:3.30.470.20 115 295 5.4E-121 T 13-10-2018 Y11_25541 9a9200936e6ded0073770ce96fc37f0a 127 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 21 123 2.5E-33 T 13-10-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 Y11_25541 9a9200936e6ded0073770ce96fc37f0a 127 Gene3D G3DSA:2.10.109.10 12 127 1.4E-35 T 13-10-2018 Y11_01691 98f4ac81d5d641ffb31c9896a8faab2a 686 Pfam PF11412 Disulphide bond corrector protein DsbC 38 146 1.2E-17 T 13-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Y11_01691 98f4ac81d5d641ffb31c9896a8faab2a 686 ProSitePatterns PS00194 Thioredoxin family active site. 590 608 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Y11_01691 98f4ac81d5d641ffb31c9896a8faab2a 686 Pfam PF13899 Thioredoxin-like 571 652 1.2E-12 T 13-10-2018 Y11_01691 98f4ac81d5d641ffb31c9896a8faab2a 686 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 288 497 1.2E-8 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Y11_01691 98f4ac81d5d641ffb31c9896a8faab2a 686 SUPERFAMILY SSF52833 562 679 1.19E-12 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_01691 98f4ac81d5d641ffb31c9896a8faab2a 686 Gene3D G3DSA:3.40.30.10 561 655 4.7E-11 T 13-10-2018 Y11_43401 017da62de47734653bc973fa3ec62343 526 PIRSF PIRSF001267 11 514 1.8E-202 T 13-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 Y11_43401 017da62de47734653bc973fa3ec62343 526 SUPERFAMILY SSF53067 145 318 1.47E-48 T 13-10-2018 Y11_43401 017da62de47734653bc973fa3ec62343 526 Gene3D G3DSA:1.10.3210.10 318 525 1.5E-82 T 13-10-2018 Y11_43401 017da62de47734653bc973fa3ec62343 526 Pfam PF02541 Ppx/GppA phosphatase family 34 316 5.7E-99 T 13-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Y11_43401 017da62de47734653bc973fa3ec62343 526 Gene3D G3DSA:3.30.420.40 22 311 1.3E-98 T 13-10-2018 Y11_43401 017da62de47734653bc973fa3ec62343 526 Gene3D G3DSA:3.30.420.150 125 303 1.3E-98 T 13-10-2018 Y11_43401 017da62de47734653bc973fa3ec62343 526 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 20 314 2.7E-101 T 13-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 Y11_43401 017da62de47734653bc973fa3ec62343 526 SUPERFAMILY SSF53067 21 141 8.7E-37 T 13-10-2018 Y11_43401 017da62de47734653bc973fa3ec62343 526 SUPERFAMILY SSF109604 321 513 3.45E-54 T 13-10-2018 Y11_33061 e34d84d1e046af74aec80a2293155302 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 13-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33061 e34d84d1e046af74aec80a2293155302 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.213 T 13-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Y11_33061 e34d84d1e046af74aec80a2293155302 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.2E-30 T 13-10-2018 IPR021131 Ribosomal protein L18e/L15P Y11_33061 e34d84d1e046af74aec80a2293155302 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 5.8E-51 T 13-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_33061 e34d84d1e046af74aec80a2293155302 144 SUPERFAMILY SSF52080 4 143 1.7E-46 T 13-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Y11_33061 e34d84d1e046af74aec80a2293155302 144 Gene3D G3DSA:3.100.10.10 70 144 2.1E-11 T 13-10-2018 Y11_00511 2b32457eff9acd4f5f3cee1ebf91108b 90 Pfam PF02371 Transposase IS116/IS110/IS902 family 2 38 1.1E-9 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_01971 2b32457eff9acd4f5f3cee1ebf91108b 90 Pfam PF02371 Transposase IS116/IS110/IS902 family 2 38 1.1E-9 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_14911 2b32457eff9acd4f5f3cee1ebf91108b 90 Pfam PF02371 Transposase IS116/IS110/IS902 family 2 38 1.1E-9 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_09341 2b32457eff9acd4f5f3cee1ebf91108b 90 Pfam PF02371 Transposase IS116/IS110/IS902 family 2 38 1.1E-9 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_37301 2b32457eff9acd4f5f3cee1ebf91108b 90 Pfam PF02371 Transposase IS116/IS110/IS902 family 2 38 1.1E-9 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_22221 2b32457eff9acd4f5f3cee1ebf91108b 90 Pfam PF02371 Transposase IS116/IS110/IS902 family 2 38 1.1E-9 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_25981 07836ff7ac4e216f52e885bd86e63f0d 298 Pfam PF03466 LysR substrate binding domain 114 280 6.8E-18 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_25981 07836ff7ac4e216f52e885bd86e63f0d 298 SUPERFAMILY SSF46785 8 91 2.07E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_25981 07836ff7ac4e216f52e885bd86e63f0d 298 Gene3D G3DSA:1.10.10.10 6 94 6.7E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_25981 07836ff7ac4e216f52e885bd86e63f0d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_25981 07836ff7ac4e216f52e885bd86e63f0d 298 SUPERFAMILY SSF53850 93 288 5.74E-22 T 13-10-2018 Y11_25981 07836ff7ac4e216f52e885bd86e63f0d 298 Gene3D G3DSA:3.40.190.290 114 288 1.0E-12 T 13-10-2018 Y11_20851 455699964690df3313308a923bba9f1a 495 Pfam PF02355 Protein export membrane protein 313 481 2.7E-16 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Y11_20851 455699964690df3313308a923bba9f1a 495 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 225 474 4.8E-84 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Y11_20851 455699964690df3313308a923bba9f1a 495 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 495 43.058 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Y11_20851 455699964690df3313308a923bba9f1a 495 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 3 481 2.3E-151 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Y11_20851 455699964690df3313308a923bba9f1a 495 SUPERFAMILY SSF82866 290 486 7.59E-42 T 13-10-2018 Y11_20851 455699964690df3313308a923bba9f1a 495 Gene3D G3DSA:3.30.1360.200 158 311 7.5E-50 T 13-10-2018 Y11_20851 455699964690df3313308a923bba9f1a 495 Gene3D G3DSA:3.30.70.3400 102 317 7.5E-50 T 13-10-2018 Y11_20851 455699964690df3313308a923bba9f1a 495 Pfam PF07549 SecD/SecF GG Motif 1 20 2.7E-5 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Y11_18161 cd444cb6cef5fbae7c0ea6261faec57c 270 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 31 269 1.8E-64 T 13-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 Y11_18161 cd444cb6cef5fbae7c0ea6261faec57c 270 Pfam PF08241 Methyltransferase domain 66 156 2.2E-23 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Y11_18161 cd444cb6cef5fbae7c0ea6261faec57c 270 SUPERFAMILY SSF53335 29 261 1.21E-37 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_18161 cd444cb6cef5fbae7c0ea6261faec57c 270 Gene3D G3DSA:3.40.50.150 30 223 4.1E-35 T 13-10-2018 Y11_18161 cd444cb6cef5fbae7c0ea6261faec57c 270 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 23 269 29.083 T 13-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 Y11_29751 9f81e97098f12f5645075593228b23a6 435 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 2 47 6.2E-12 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_29751 9f81e97098f12f5645075593228b23a6 435 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 435 52.497 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Y11_29751 9f81e97098f12f5645075593228b23a6 435 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 105 317 3.3E-63 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_29751 9f81e97098f12f5645075593228b23a6 435 SUPERFAMILY SSF50615 1 50 2.46E-12 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_29751 9f81e97098f12f5645075593228b23a6 435 Gene3D G3DSA:1.10.1140.10 320 435 3.9E-60 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_29751 9f81e97098f12f5645075593228b23a6 435 SUPERFAMILY SSF47917 320 434 1.91E-55 T 13-10-2018 Y11_29751 9f81e97098f12f5645075593228b23a6 435 SUPERFAMILY SSF52540 52 323 5.7E-90 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_29751 9f81e97098f12f5645075593228b23a6 435 Gene3D G3DSA:2.40.10.170 1 50 6.1E-16 T 13-10-2018 Y11_29751 9f81e97098f12f5645075593228b23a6 435 Gene3D G3DSA:3.40.50.300 51 319 1.2E-112 T 13-10-2018 Y11_29751 9f81e97098f12f5645075593228b23a6 435 SMART SM00382 117 380 1.2E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_29751 9f81e97098f12f5645075593228b23a6 435 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 1 435 2.8E-250 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Y11_29751 9f81e97098f12f5645075593228b23a6 435 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 308 317 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Y11_36171 bcb6492275e6d7882edd63cebb44fabd 432 Gene3D G3DSA:1.10.300.10 102 201 8.0E-106 T 13-10-2018 Y11_36171 bcb6492275e6d7882edd63cebb44fabd 432 SMART SM00788 4 425 1.1E-293 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Y11_36171 bcb6492275e6d7882edd63cebb44fabd 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 13-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Y11_36171 bcb6492275e6d7882edd63cebb44fabd 432 SUPERFAMILY SSF52540 3 431 1.17E-176 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_36171 bcb6492275e6d7882edd63cebb44fabd 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 13-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Y11_36171 bcb6492275e6d7882edd63cebb44fabd 432 Gene3D G3DSA:3.90.170.10 267 432 2.7E-70 T 13-10-2018 Y11_36171 bcb6492275e6d7882edd63cebb44fabd 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 8.1E-202 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Y11_36171 bcb6492275e6d7882edd63cebb44fabd 432 Gene3D G3DSA:3.40.440.10 6 249 8.0E-106 T 13-10-2018 Y11_36171 bcb6492275e6d7882edd63cebb44fabd 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 3.4E-177 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Y11_36171 bcb6492275e6d7882edd63cebb44fabd 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 216.301 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Y11_11351 a4f435aa6f66a1423d4e2b0004941948 349 SUPERFAMILY SSF103481 55 148 1.57E-12 T 13-10-2018 Y11_11351 a4f435aa6f66a1423d4e2b0004941948 349 SUPERFAMILY SSF103481 193 289 3.79E-6 T 13-10-2018 Y11_11351 a4f435aa6f66a1423d4e2b0004941948 349 Pfam PF00892 EamA-like transporter family 10 144 2.5E-19 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_11351 a4f435aa6f66a1423d4e2b0004941948 349 Pfam PF00892 EamA-like transporter family 155 284 1.4E-6 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_22361 27aac9b6707775a2b04a841dcdcb7487 405 Pfam PF00795 Carbon-nitrogen hydrolase 7 248 8.5E-52 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Y11_22361 27aac9b6707775a2b04a841dcdcb7487 405 Gene3D G3DSA:3.60.110.10 8 266 2.0E-81 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Y11_22361 27aac9b6707775a2b04a841dcdcb7487 405 SUPERFAMILY SSF56317 6 267 1.57E-76 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Y11_39271 a8c279cab059ac65eaaa377c3e304144 462 Pfam PF00324 Amino acid permease 26 461 7.8E-118 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Y11_39271 a8c279cab059ac65eaaa377c3e304144 462 PIRSF PIRSF006060 3 461 4.2E-72 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_39271 a8c279cab059ac65eaaa377c3e304144 462 ProSitePatterns PS00218 Amino acid permeases signature. 51 81 - T 13-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 Y11_39271 a8c279cab059ac65eaaa377c3e304144 462 Gene3D G3DSA:1.20.1740.10 18 462 2.0E-57 T 13-10-2018 Y11_16781 1c2e6d9b5d7df75b8cd4b4d69cbc5c8e 289 Pfam PF00483 Nucleotidyl transferase 2 238 1.1E-67 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Y11_16781 1c2e6d9b5d7df75b8cd4b4d69cbc5c8e 289 SUPERFAMILY SSF53448 1 286 2.82E-86 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_16781 1c2e6d9b5d7df75b8cd4b4d69cbc5c8e 289 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 287 3.7E-154 T 13-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Y11_16781 1c2e6d9b5d7df75b8cd4b4d69cbc5c8e 289 Gene3D G3DSA:3.90.550.10 1 289 3.5E-85 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_13111 27b6d1ec2f275b678a40bed8bf6a6d98 294 Gene3D G3DSA:3.40.50.10190 205 294 2.0E-13 T 13-10-2018 IPR036420 BRCT domain superfamily Y11_13111 27b6d1ec2f275b678a40bed8bf6a6d98 294 SUPERFAMILY SSF52113 207 273 9.32E-7 T 13-10-2018 IPR036420 BRCT domain superfamily Y11_28591 c6b299b2beda25820966218e38664bb5 241 PIRSF PIRSF003073 1 241 7.0E-72 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Y11_28591 c6b299b2beda25820966218e38664bb5 241 Pfam PF01695 IstB-like ATP binding protein 54 228 9.5E-56 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Y11_28591 c6b299b2beda25820966218e38664bb5 241 Gene3D G3DSA:3.40.50.300 61 241 5.9E-41 T 13-10-2018 Y11_28591 c6b299b2beda25820966218e38664bb5 241 SMART SM00382 97 229 3.8E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_28591 c6b299b2beda25820966218e38664bb5 241 SUPERFAMILY SSF52540 64 228 2.34E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_35371 84c73fe7f0398715509aaa04d71dc958 169 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 164 6.9E-24 T 13-10-2018 IPR012842 Type III secretion system HrpE/YscL Y11_39191 894a10291d212ca66abbec1ac02da230 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 4.4E-79 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Y11_39191 894a10291d212ca66abbec1ac02da230 347 SUPERFAMILY SSF51412 7 335 1.15E-99 T 13-10-2018 Y11_39191 894a10291d212ca66abbec1ac02da230 347 PIRSF PIRSF000235 1 347 1.1E-199 T 13-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 Y11_39191 894a10291d212ca66abbec1ac02da230 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 1.9E-198 T 13-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 Y11_39191 894a10291d212ca66abbec1ac02da230 347 Gene3D G3DSA:3.20.20.70 1 345 3.3E-115 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_39191 894a10291d212ca66abbec1ac02da230 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 13-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Y11_39191 894a10291d212ca66abbec1ac02da230 347 SMART SM01240 7 344 4.6E-139 T 13-10-2018 Y11_39191 894a10291d212ca66abbec1ac02da230 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 50.551 T 13-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 Y11_p0821 2d45a3fabe9a63fcafaea1efcf1ef6a7 122 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 2 122 1.6E-59 T 13-10-2018 IPR012672 Type III secretion system YscX Y11_p0821 2d45a3fabe9a63fcafaea1efcf1ef6a7 122 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 2 122 1.4E-53 T 13-10-2018 IPR012672 Type III secretion system YscX Y11_14621 0d29711ac844d09c75f556297c767707 165 Gene3D G3DSA:2.40.50.180 37 146 1.9E-39 T 13-10-2018 Y11_14621 0d29711ac844d09c75f556297c767707 165 SUPERFAMILY SSF50341 17 157 4.58E-39 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Y11_14621 0d29711ac844d09c75f556297c767707 165 SMART SM00260 14 151 8.7E-43 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Y11_14621 0d29711ac844d09c75f556297c767707 165 Pfam PF01584 CheW-like domain 18 154 5.4E-37 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Y11_14621 0d29711ac844d09c75f556297c767707 165 Gene3D G3DSA:2.30.30.40 20 145 1.9E-39 T 13-10-2018 Y11_08631 c904d425bed7ab81ec90dd8ce3b80170 330 Pfam PF00005 ABC transporter 24 187 7.2E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_08631 c904d425bed7ab81ec90dd8ce3b80170 330 SMART SM00382 32 235 3.6E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_08631 c904d425bed7ab81ec90dd8ce3b80170 330 Gene3D G3DSA:3.40.50.300 2 329 1.6E-75 T 13-10-2018 Y11_08631 c904d425bed7ab81ec90dd8ce3b80170 330 SUPERFAMILY SSF52540 3 265 3.73E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_08631 c904d425bed7ab81ec90dd8ce3b80170 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 4.3E-16 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Y11_08631 c904d425bed7ab81ec90dd8ce3b80170 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 4.7E-20 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Y11_02421 6a0a1c220b4ca8296f8b2871d5553767 454 Gene3D G3DSA:3.60.120.10 1 447 2.8E-154 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Y11_02421 6a0a1c220b4ca8296f8b2871d5553767 454 SUPERFAMILY SSF56322 23 442 2.09E-97 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Y11_02421 6a0a1c220b4ca8296f8b2871d5553767 454 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 93 441 7.2E-104 T 13-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 Y11_02421 6a0a1c220b4ca8296f8b2871d5553767 454 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 444 29.107 T 13-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 Y11_02421 6a0a1c220b4ca8296f8b2871d5553767 454 Pfam PF00425 chorismate binding enzyme 185 434 1.0E-63 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 SUPERFAMILY SSF82714 184 268 5.1E-12 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 Gene3D G3DSA:1.20.1640.10 508 1010 4.8E-249 T 13-10-2018 Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 Gene3D G3DSA:3.30.70.1440 658 859 4.8E-249 T 13-10-2018 Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 SUPERFAMILY SSF82693 559 634 2.62E-7 T 13-10-2018 Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 Pfam PF00873 AcrB/AcrD/AcrF family 8 1012 7.1E-160 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 SUPERFAMILY SSF82693 40 135 2.22E-19 T 13-10-2018 Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 Gene3D G3DSA:3.30.70.1430 40 807 4.8E-249 T 13-10-2018 Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 Gene3D G3DSA:3.30.70.1320 136 328 4.8E-249 T 13-10-2018 Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 SUPERFAMILY SSF82866 795 1014 2.49E-45 T 13-10-2018 Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 Gene3D G3DSA:3.30.2090.10 179 271 4.8E-249 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 SUPERFAMILY SSF82714 722 792 1.31E-8 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 Gene3D G3DSA:3.30.2090.10 709 799 4.8E-249 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 SUPERFAMILY SSF82866 293 489 4.84E-37 T 13-10-2018 Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 2.0E-19 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 2.0E-19 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.0E-19 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 2.0E-19 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 2.0E-19 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 SUPERFAMILY SSF82693 136 326 2.79E-23 T 13-10-2018 Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 Gene3D G3DSA:1.20.1640.10 13 507 4.8E-249 T 13-10-2018 Y11_37701 bbf52a11bf864ebadcdd14f88bcce312 1028 Gene3D G3DSA:3.30.70.1430 559 657 4.8E-249 T 13-10-2018 Y11_07961 b3931d1bc924864a7f4facbb285fcabd 157 PRINTS PR01011 Glutathione peroxidase family signature 31 47 4.3E-7 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Y11_07961 b3931d1bc924864a7f4facbb285fcabd 157 PRINTS PR01011 Glutathione peroxidase family signature 116 125 4.3E-7 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Y11_07961 b3931d1bc924864a7f4facbb285fcabd 157 SUPERFAMILY SSF52833 1 155 2.24E-47 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_07961 b3931d1bc924864a7f4facbb285fcabd 157 Gene3D G3DSA:3.40.30.10 1 157 1.0E-55 T 13-10-2018 Y11_07961 b3931d1bc924864a7f4facbb285fcabd 157 Pfam PF00255 Glutathione peroxidase 1 84 1.4E-33 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Y11_07961 b3931d1bc924864a7f4facbb285fcabd 157 PIRSF PIRSF000303 1 157 1.9E-53 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Y11_21011 ec29f5e1b7bc6743f7859fe6fdf778fa 330 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 34 314 4.1E-69 T 13-10-2018 IPR011862 Phosphate binding protein GO:0042301 Y11_21011 ec29f5e1b7bc6743f7859fe6fdf778fa 330 SUPERFAMILY SSF53850 44 324 2.04E-67 T 13-10-2018 Y11_21011 ec29f5e1b7bc6743f7859fe6fdf778fa 330 Gene3D G3DSA:3.40.190.10 45 316 1.0E-104 T 13-10-2018 Y11_21011 ec29f5e1b7bc6743f7859fe6fdf778fa 330 Gene3D G3DSA:3.40.190.10 130 272 1.0E-104 T 13-10-2018 Y11_21011 ec29f5e1b7bc6743f7859fe6fdf778fa 330 Pfam PF12849 PBP superfamily domain 42 299 6.4E-32 T 13-10-2018 IPR024370 PBP domain Y11_08861 6dae46ec4d648cceb619b5801658621a 221 SMART SM00148 11 155 1.3E-8 T 13-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain Y11_08861 6dae46ec4d648cceb619b5801658621a 221 SUPERFAMILY SSF51695 1 212 8.37E-45 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Y11_08861 6dae46ec4d648cceb619b5801658621a 221 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 20 155 5.2E-10 T 13-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain Y11_08861 6dae46ec4d648cceb619b5801658621a 221 Gene3D G3DSA:3.20.20.190 1 221 2.7E-65 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Y11_42771 11bca8c778b5bd9ae64fefd0eb82c974 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 5.1E-32 T 13-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Y11_42771 11bca8c778b5bd9ae64fefd0eb82c974 66 SUPERFAMILY SSF140319 3 64 2.09E-26 T 13-10-2018 IPR036762 IscX-like superfamily Y11_42771 11bca8c778b5bd9ae64fefd0eb82c974 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 2.4E-31 T 13-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Y11_42771 11bca8c778b5bd9ae64fefd0eb82c974 66 Gene3D G3DSA:1.10.10.600 1 66 1.3E-30 T 13-10-2018 IPR036762 IscX-like superfamily Y11_42771 11bca8c778b5bd9ae64fefd0eb82c974 66 PIRSF PIRSF039003 3 66 8.5E-32 T 13-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Y11_33891 12cae5391f770e0e66871498bacd3bb0 106 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 105 28.873 T 13-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Y11_33891 12cae5391f770e0e66871498bacd3bb0 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 2.6E-42 T 13-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Y11_33891 12cae5391f770e0e66871498bacd3bb0 106 SUPERFAMILY SSF55387 1 105 2.79E-39 T 13-10-2018 Y11_33891 12cae5391f770e0e66871498bacd3bb0 106 Gene3D G3DSA:3.30.920.10 1 106 8.0E-42 T 13-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Y11_33891 12cae5391f770e0e66871498bacd3bb0 106 SMART SM01219 1 106 4.9E-53 T 13-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Y11_33891 12cae5391f770e0e66871498bacd3bb0 106 Pfam PF01491 Frataxin-like domain 1 101 6.5E-29 T 13-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Y11_33891 12cae5391f770e0e66871498bacd3bb0 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 13-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Y11_16471 9a0ac86ba4b8b19bab3d1b97dc58949a 363 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 350 2.4E-47 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Y11_16471 9a0ac86ba4b8b19bab3d1b97dc58949a 363 Gene3D G3DSA:3.40.50.1970 2 160 6.5E-26 T 13-10-2018 Y11_16471 9a0ac86ba4b8b19bab3d1b97dc58949a 363 PIRSF PIRSF000112 2 362 9.7E-114 T 13-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 Y11_16471 9a0ac86ba4b8b19bab3d1b97dc58949a 363 SUPERFAMILY SSF56796 10 357 1.83E-61 T 13-10-2018 Y11_16471 9a0ac86ba4b8b19bab3d1b97dc58949a 363 Gene3D G3DSA:1.20.1090.10 162 363 2.0E-57 T 13-10-2018 Y11_16471 9a0ac86ba4b8b19bab3d1b97dc58949a 363 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Y11_22611 fb22c090720ef58e45733aeaeac89ed2 181 Pfam PF00419 Fimbrial protein 36 180 7.0E-12 T 13-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 Y11_22611 fb22c090720ef58e45733aeaeac89ed2 181 Gene3D G3DSA:2.60.40.1090 32 180 2.2E-27 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Y11_22611 fb22c090720ef58e45733aeaeac89ed2 181 SUPERFAMILY SSF49401 33 180 5.47E-31 T 13-10-2018 IPR008966 Adhesion domain superfamily Y11_37091 b892c0b9eac73c5392cf672afad03a28 90 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 76 1.6E-34 T 13-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 Y11_36431 50ee049bfd810443251d8fe4992a65ff 1281 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 945 1281 3.8E-65 T 13-10-2018 IPR007452 Translocation and assembly module TamB Y11_18291 b08ce191ef0b9c0b2ec51f4ec06aaef7 497 SUPERFAMILY SSF52540 256 490 1.3E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_18291 b08ce191ef0b9c0b2ec51f4ec06aaef7 497 Pfam PF00005 ABC transporter 282 435 8.9E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_18291 b08ce191ef0b9c0b2ec51f4ec06aaef7 497 Pfam PF00005 ABC transporter 36 169 6.4E-18 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_18291 b08ce191ef0b9c0b2ec51f4ec06aaef7 497 SUPERFAMILY SSF52540 37 231 2.79E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_18291 b08ce191ef0b9c0b2ec51f4ec06aaef7 497 Gene3D G3DSA:3.40.50.300 250 494 4.4E-49 T 13-10-2018 Y11_18291 b08ce191ef0b9c0b2ec51f4ec06aaef7 497 SMART SM00382 291 486 2.1E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_18291 b08ce191ef0b9c0b2ec51f4ec06aaef7 497 SMART SM00382 34 225 4.8E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_18291 b08ce191ef0b9c0b2ec51f4ec06aaef7 497 Gene3D G3DSA:3.40.50.300 33 233 1.7E-35 T 13-10-2018 Y11_06971 aff925a3124d075deb0964c7efcac1dc 405 Gene3D G3DSA:3.40.350.10 13 176 7.2E-14 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Y11_06971 aff925a3124d075deb0964c7efcac1dc 405 SUPERFAMILY SSF55920 174 403 1.83E-50 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like Y11_06971 aff925a3124d075deb0964c7efcac1dc 405 SUPERFAMILY SSF53092 9 176 6.63E-13 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Y11_06971 aff925a3124d075deb0964c7efcac1dc 405 Gene3D G3DSA:3.90.230.10 177 403 2.9E-47 T 13-10-2018 Y11_06971 aff925a3124d075deb0964c7efcac1dc 405 Pfam PF00557 Metallopeptidase family M24 185 387 1.2E-35 T 13-10-2018 IPR000994 Peptidase M24 Y11_06971 aff925a3124d075deb0964c7efcac1dc 405 Pfam PF01321 Creatinase/Prolidase N-terminal domain 15 177 5.3E-26 T 13-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Y11_41611 26c7752323e799252862b81494c2c7c1 102 Pfam PF05957 Bacterial protein of unknown function (DUF883) 11 102 9.1E-28 T 13-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 Y11_02411 5cc24192252bd8a124877805ee86d1f5 102 Pfam PF05957 Bacterial protein of unknown function (DUF883) 10 102 4.6E-32 T 13-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 Y11_09671 db206c2748f3dcbc7560240dbce2f6e3 150 Gene3D G3DSA:1.10.260.40 22 117 1.7E-5 T 13-10-2018 Y11_09671 db206c2748f3dcbc7560240dbce2f6e3 150 SUPERFAMILY SSF47413 24 83 3.04E-5 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_09681 db206c2748f3dcbc7560240dbce2f6e3 150 Gene3D G3DSA:1.10.260.40 22 117 1.7E-5 T 13-10-2018 Y11_09681 db206c2748f3dcbc7560240dbce2f6e3 150 SUPERFAMILY SSF47413 24 83 3.04E-5 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_36251 f7cd516d6094ef00e5012325062f1828 249 SUPERFAMILY SSF53474 12 249 4.02E-39 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_36251 f7cd516d6094ef00e5012325062f1828 249 Pfam PF00326 Prolyl oligopeptidase family 96 234 8.8E-14 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Y11_36251 f7cd516d6094ef00e5012325062f1828 249 Gene3D G3DSA:3.40.50.1820 2 249 2.6E-57 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_23131 7f8a4108e48459c8cd5eebc925559a4c 359 SUPERFAMILY SSF51569 4 357 1.26E-131 T 13-10-2018 Y11_23131 7f8a4108e48459c8cd5eebc925559a4c 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Y11_23131 7f8a4108e48459c8cd5eebc925559a4c 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Y11_23131 7f8a4108e48459c8cd5eebc925559a4c 359 Gene3D G3DSA:3.20.20.70 2 359 3.5E-153 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_23131 7f8a4108e48459c8cd5eebc925559a4c 359 PIRSF PIRSF001359 13 359 1.2E-102 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Y11_23131 7f8a4108e48459c8cd5eebc925559a4c 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 9.5E-190 T 13-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Y11_23131 7f8a4108e48459c8cd5eebc925559a4c 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 2.6E-114 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Y11_23131 7f8a4108e48459c8cd5eebc925559a4c 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 1.7E-88 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Y11_32321 d27773efef5138fb5e260c4cc6009a17 416 Gene3D G3DSA:3.30.1370.120 123 184 1.2E-8 T 13-10-2018 IPR038591 NolW-like superfamily Y11_32321 d27773efef5138fb5e260c4cc6009a17 416 Pfam PF00263 Bacterial type II and III secretion system protein 255 414 1.5E-46 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Y11_32321 d27773efef5138fb5e260c4cc6009a17 416 PRINTS PR01032 Gene IV protein signature 276 299 3.6E-9 T 13-10-2018 Y11_32321 d27773efef5138fb5e260c4cc6009a17 416 PRINTS PR01032 Gene IV protein signature 235 258 3.6E-9 T 13-10-2018 Y11_32321 d27773efef5138fb5e260c4cc6009a17 416 PRINTS PR01032 Gene IV protein signature 395 416 3.6E-9 T 13-10-2018 Y11_32321 d27773efef5138fb5e260c4cc6009a17 416 PRINTS PR01032 Gene IV protein signature 342 370 3.6E-9 T 13-10-2018 Y11_32321 d27773efef5138fb5e260c4cc6009a17 416 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 360 393 - T 13-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 Y11_32321 d27773efef5138fb5e260c4cc6009a17 416 PRINTS PR00811 Bacterial general secretion pathway protein D signature 251 275 1.5E-13 T 13-10-2018 IPR001775 GspD/PilQ family Y11_32321 d27773efef5138fb5e260c4cc6009a17 416 PRINTS PR00811 Bacterial general secretion pathway protein D signature 402 416 1.5E-13 T 13-10-2018 IPR001775 GspD/PilQ family Y11_32321 d27773efef5138fb5e260c4cc6009a17 416 PRINTS PR00811 Bacterial general secretion pathway protein D signature 379 397 1.5E-13 T 13-10-2018 IPR001775 GspD/PilQ family Y11_32321 d27773efef5138fb5e260c4cc6009a17 416 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 27 414 1.6E-121 T 13-10-2018 IPR013355 Type IV pilus secretin PilQ Y11_32321 d27773efef5138fb5e260c4cc6009a17 416 Gene3D G3DSA:3.55.50.30 17 121 3.6E-24 T 13-10-2018 Y11_32321 d27773efef5138fb5e260c4cc6009a17 416 Pfam PF03958 Bacterial type II/III secretion system short domain 125 185 6.8E-11 T 13-10-2018 IPR005644 NolW-like Y11_18961 e8aa39e555d2ac0b4fceb71dbcded7e2 467 Gene3D G3DSA:2.40.160.10 23 442 2.2E-32 T 13-10-2018 IPR023614 Porin domain superfamily Y11_18961 e8aa39e555d2ac0b4fceb71dbcded7e2 467 Pfam PF03573 outer membrane porin, OprD family 33 436 4.0E-22 T 13-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 Y11_09861 0e4a0458e2e1db6148f39058b3f94915 405 Gene3D G3DSA:3.30.420.40 92 382 2.2E-89 T 13-10-2018 Y11_09861 0e4a0458e2e1db6148f39058b3f94915 405 SUPERFAMILY SSF53067 88 394 3.61E-43 T 13-10-2018 Y11_09861 0e4a0458e2e1db6148f39058b3f94915 405 Gene3D G3DSA:3.30.420.40 209 377 2.2E-89 T 13-10-2018 Y11_09861 0e4a0458e2e1db6148f39058b3f94915 405 Pfam PF00480 ROK family 96 388 4.0E-49 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Y11_09861 0e4a0458e2e1db6148f39058b3f94915 405 SUPERFAMILY SSF46785 12 77 3.49E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_09861 0e4a0458e2e1db6148f39058b3f94915 405 Gene3D G3DSA:1.10.10.10 1 82 1.5E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_12351 0c6c963ee57f1e93afc338d0cef49c17 388 SUPERFAMILY SSF103473 3 379 1.44E-54 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_12351 0c6c963ee57f1e93afc338d0cef49c17 388 Gene3D G3DSA:1.20.1250.20 199 377 2.5E-15 T 13-10-2018 Y11_12351 0c6c963ee57f1e93afc338d0cef49c17 388 Pfam PF07690 Major Facilitator Superfamily 9 339 1.6E-41 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_12351 0c6c963ee57f1e93afc338d0cef49c17 388 Gene3D G3DSA:1.20.1250.20 2 198 6.5E-31 T 13-10-2018 Y11_29111 5805660539d557b3da5fa8439a73cddc 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 392 9.9E-56 T 13-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 Y11_29111 5805660539d557b3da5fa8439a73cddc 394 Pfam PF07670 Nucleoside recognition 92 189 8.9E-6 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Y11_29111 5805660539d557b3da5fa8439a73cddc 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 2.7E-16 T 13-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 Y11_05031 fbdbc6dfaf1c52970b891ec2ffb024bf 967 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 597 676 5.1E-24 T 13-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 Y11_05031 fbdbc6dfaf1c52970b891ec2ffb024bf 967 Gene3D G3DSA:2.180.10.10 5 676 1.1E-202 T 13-10-2018 Y11_38341 0d49baf3bd3c13816fb7b3e15216f4e0 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_38341 0d49baf3bd3c13816fb7b3e15216f4e0 349 Pfam PF01548 Transposase 16 156 2.7E-14 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_35171 c4a3db3bcf43ec5e12c2c2888a7e1271 210 SUPERFAMILY SSF46894 144 208 3.33E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_35171 c4a3db3bcf43ec5e12c2c2888a7e1271 210 SUPERFAMILY SSF52172 2 132 5.27E-33 T 13-10-2018 IPR011006 CheY-like superfamily Y11_35171 c4a3db3bcf43ec5e12c2c2888a7e1271 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.2E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_35171 c4a3db3bcf43ec5e12c2c2888a7e1271 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.2E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_35171 c4a3db3bcf43ec5e12c2c2888a7e1271 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.2E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_35171 c4a3db3bcf43ec5e12c2c2888a7e1271 210 SMART SM00421 146 203 6.0E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_35171 c4a3db3bcf43ec5e12c2c2888a7e1271 210 Gene3D G3DSA:3.40.50.12740 3 208 1.1E-61 T 13-10-2018 Y11_35171 c4a3db3bcf43ec5e12c2c2888a7e1271 210 SMART SM00448 3 116 3.8E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_35171 c4a3db3bcf43ec5e12c2c2888a7e1271 210 Pfam PF00072 Response regulator receiver domain 6 116 2.9E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_35171 c4a3db3bcf43ec5e12c2c2888a7e1271 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 1.5E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_35171 c4a3db3bcf43ec5e12c2c2888a7e1271 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_32591 d4f6f91f34fbf2333879a183b9e5c342 78 PIRSF PIRSF006169 1 76 5.7E-36 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 Y11_32591 d4f6f91f34fbf2333879a183b9e5c342 78 SUPERFAMILY SSF118001 1 71 5.62E-28 T 13-10-2018 IPR036685 YehU-like superfamily Y11_32591 d4f6f91f34fbf2333879a183b9e5c342 78 Gene3D G3DSA:1.10.10.610 1 74 1.1E-28 T 13-10-2018 IPR036685 YehU-like superfamily Y11_32591 d4f6f91f34fbf2333879a183b9e5c342 78 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.062 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 Y11_32591 d4f6f91f34fbf2333879a183b9e5c342 78 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 3.0E-26 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 Y11_32591 d4f6f91f34fbf2333879a183b9e5c342 78 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 67 1.4E-33 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 Y11_31371 298c10f9c2960f68808601db47bcd6b8 329 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 40 313 8.7E-122 T 13-10-2018 IPR005274 Inner membrane protein YhjD Y11_31371 298c10f9c2960f68808601db47bcd6b8 329 Pfam PF03631 Virulence factor BrkB 54 312 3.2E-46 T 13-10-2018 IPR017039 Virulence factor BrkB Y11_31371 298c10f9c2960f68808601db47bcd6b8 329 PIRSF PIRSF035875 24 323 3.5E-22 T 13-10-2018 IPR017039 Virulence factor BrkB Y11_06471 5edaa9c55c8d10584a75408cc279567a 318 Pfam PF00561 alpha/beta hydrolase fold 41 297 2.2E-31 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_06471 5edaa9c55c8d10584a75408cc279567a 318 PIRSF PIRSF006431 2 318 1.0E-137 T 13-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 Y11_06471 5edaa9c55c8d10584a75408cc279567a 318 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 12 314 4.4E-124 T 13-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 Y11_06471 5edaa9c55c8d10584a75408cc279567a 318 SUPERFAMILY SSF53474 7 314 4.35E-61 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_06471 5edaa9c55c8d10584a75408cc279567a 318 Gene3D G3DSA:3.40.50.1820 1 317 4.5E-111 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_06471 5edaa9c55c8d10584a75408cc279567a 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 6.6E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_06471 5edaa9c55c8d10584a75408cc279567a 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 6.6E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_06471 5edaa9c55c8d10584a75408cc279567a 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 63 78 6.6E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_06471 5edaa9c55c8d10584a75408cc279567a 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 66 77 3.2E-13 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Y11_06471 5edaa9c55c8d10584a75408cc279567a 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 109 123 3.2E-13 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Y11_06471 5edaa9c55c8d10584a75408cc279567a 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 40 48 3.2E-13 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Y11_12151 f5efb6fe4273eca5515d6a7631160d20 255 Gene3D G3DSA:3.40.1410.10 103 238 2.9E-35 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Y11_12151 f5efb6fe4273eca5515d6a7631160d20 255 SMART SM00866 105 242 3.9E-35 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Y11_12151 f5efb6fe4273eca5515d6a7631160d20 255 SMART SM00345 25 84 1.7E-20 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_12151 f5efb6fe4273eca5515d6a7631160d20 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 1.2E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_12151 f5efb6fe4273eca5515d6a7631160d20 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 1.2E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_12151 f5efb6fe4273eca5515d6a7631160d20 255 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 20 249 1.4E-106 T 13-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 Y11_12151 f5efb6fe4273eca5515d6a7631160d20 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 5.6E-21 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_12151 f5efb6fe4273eca5515d6a7631160d20 255 SUPERFAMILY SSF46785 18 88 7.81E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_12151 f5efb6fe4273eca5515d6a7631160d20 255 Pfam PF07702 UTRA domain 105 242 7.0E-36 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Y11_12151 f5efb6fe4273eca5515d6a7631160d20 255 SUPERFAMILY SSF64288 72 248 2.04E-44 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Y11_12151 f5efb6fe4273eca5515d6a7631160d20 255 Gene3D G3DSA:1.10.10.10 19 88 4.9E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_41431 4b7f70001a86f26b75538328a4082ffa 253 Gene3D G3DSA:3.60.10.10 35 253 1.3E-18 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Y11_41431 4b7f70001a86f26b75538328a4082ffa 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 40 244 4.4E-9 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Y11_41431 4b7f70001a86f26b75538328a4082ffa 253 SUPERFAMILY SSF56219 36 251 6.02E-25 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Y11_33111 c44f03da9b34eb161c13559d059cd460 206 SUPERFAMILY SSF55174 3 206 7.2E-72 T 13-10-2018 Y11_33111 c44f03da9b34eb161c13559d059cd460 206 Pfam PF01479 S4 domain 97 143 7.2E-18 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33111 c44f03da9b34eb161c13559d059cd460 206 Gene3D G3DSA:3.10.290.10 103 191 4.9E-36 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Y11_33111 c44f03da9b34eb161c13559d059cd460 206 SMART SM00363 96 160 8.2E-20 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33111 c44f03da9b34eb161c13559d059cd460 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 1.1E-85 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Y11_33111 c44f03da9b34eb161c13559d059cd460 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.168 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Y11_33111 c44f03da9b34eb161c13559d059cd460 206 SMART SM01390 3 95 6.1E-50 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Y11_33111 c44f03da9b34eb161c13559d059cd460 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 6.8E-33 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Y11_33111 c44f03da9b34eb161c13559d059cd460 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 13-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_33111 c44f03da9b34eb161c13559d059cd460 206 Gene3D G3DSA:1.10.1050.10 1 102 7.6E-46 T 13-10-2018 Y11_09291 870ae303b95854be851e63590cf5beae 258 SMART SM00644 7 158 4.1E-36 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Y11_09291 870ae303b95854be851e63590cf5beae 258 SUPERFAMILY SSF55846 12 174 1.57E-46 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Y11_09291 870ae303b95854be851e63590cf5beae 258 Gene3D G3DSA:3.40.80.10 17 172 3.2E-52 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Y11_09291 870ae303b95854be851e63590cf5beae 258 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 17 159 2.1E-26 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Y11_09291 870ae303b95854be851e63590cf5beae 258 Gene3D G3DSA:1.10.101.10 173 254 1.2E-27 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Y11_09291 870ae303b95854be851e63590cf5beae 258 SUPERFAMILY SSF47090 178 255 1.49E-18 T 13-10-2018 IPR036365 PGBD-like superfamily Y11_16581 fe56fa85ad7faa24750a3a8a513fc423 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 43.831 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Y11_16581 fe56fa85ad7faa24750a3a8a513fc423 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 9.6E-114 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Y11_16581 fe56fa85ad7faa24750a3a8a513fc423 258 Pfam PF00977 Histidine biosynthesis protein 5 239 2.3E-75 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Y11_16581 fe56fa85ad7faa24750a3a8a513fc423 258 SUPERFAMILY SSF51366 1 257 1.41E-71 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Y11_16581 fe56fa85ad7faa24750a3a8a513fc423 258 Gene3D G3DSA:3.20.20.70 1 258 3.1E-90 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_31791 d99c9902cf88c2b4c12ecaf896de1e31 367 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 3.5E-213 T 13-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Y11_31791 d99c9902cf88c2b4c12ecaf896de1e31 367 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 13-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Y11_31791 d99c9902cf88c2b4c12ecaf896de1e31 367 Gene3D G3DSA:3.40.50.720 4 356 1.2E-150 T 13-10-2018 Y11_31791 d99c9902cf88c2b4c12ecaf896de1e31 367 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 6.0E-23 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Y11_31791 d99c9902cf88c2b4c12ecaf896de1e31 367 SMART SM00859 3 122 9.9E-25 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Y11_31791 d99c9902cf88c2b4c12ecaf896de1e31 367 SUPERFAMILY SSF51735 1 147 2.44E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_31791 d99c9902cf88c2b4c12ecaf896de1e31 367 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 353 6.6E-58 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Y11_31791 d99c9902cf88c2b4c12ecaf896de1e31 367 PIRSF PIRSF000148 1 367 6.8E-68 T 13-10-2018 Y11_31791 d99c9902cf88c2b4c12ecaf896de1e31 367 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 33.971 T 13-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Y11_31791 d99c9902cf88c2b4c12ecaf896de1e31 367 SUPERFAMILY SSF55347 134 354 6.55E-79 T 13-10-2018 Y11_31791 d99c9902cf88c2b4c12ecaf896de1e31 367 Gene3D G3DSA:3.30.360.10 135 350 1.2E-150 T 13-10-2018 Y11_04961 dc39f8d15a5734e3b9376d63a673c92e 517 Gene3D G3DSA:2.60.40.10 404 517 4.8E-49 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_04961 dc39f8d15a5734e3b9376d63a673c92e 517 SUPERFAMILY SSF81296 403 516 1.68E-33 T 13-10-2018 IPR014756 Immunoglobulin E-set Y11_04961 dc39f8d15a5734e3b9376d63a673c92e 517 PIRSF PIRSF006281 4 517 6.3E-240 T 13-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD Y11_04961 dc39f8d15a5734e3b9376d63a673c92e 517 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 5 515 61.789 T 13-10-2018 IPR023704 Glucan biosynthesis protein G Y11_04961 dc39f8d15a5734e3b9376d63a673c92e 517 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 29 513 7.4E-197 T 13-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 Y11_04961 dc39f8d15a5734e3b9376d63a673c92e 517 Gene3D G3DSA:2.70.98.10 28 403 3.3E-169 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Y11_04961 dc39f8d15a5734e3b9376d63a673c92e 517 SUPERFAMILY SSF74650 29 400 7.22E-165 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Y11_35611 568b567ae96a7380608ac448ae46b686 44 Gene3D G3DSA:1.10.1220.170 2 44 4.6E-18 T 13-10-2018 Y11_35611 568b567ae96a7380608ac448ae46b686 44 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 35 2.1E-7 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Y11_35611 568b567ae96a7380608ac448ae46b686 44 SUPERFAMILY SSF143120 1 41 1.49E-10 T 13-10-2018 IPR036165 YefM-like superfamily Y11_22971 39b1c7b34ffe8db203a7bdebe017e91c 223 SUPERFAMILY SSF102114 24 118 2.35E-6 T 13-10-2018 Y11_22971 39b1c7b34ffe8db203a7bdebe017e91c 223 PIRSF PIRSF000370 1 223 3.0E-70 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Y11_22971 39b1c7b34ffe8db203a7bdebe017e91c 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 5.6E-14 T 13-10-2018 Y11_22971 39b1c7b34ffe8db203a7bdebe017e91c 223 Pfam PF04055 Radical SAM superfamily 26 124 2.8E-8 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_22971 39b1c7b34ffe8db203a7bdebe017e91c 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 2.7E-110 T 13-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Y11_22971 39b1c7b34ffe8db203a7bdebe017e91c 223 Gene3D G3DSA:3.20.20.70 2 223 7.6E-57 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_22971 39b1c7b34ffe8db203a7bdebe017e91c 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 36.341 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Y11_30771 9db3f1d053193960c9d38ed1652622a0 817 Gene3D G3DSA:2.60.40.3110 239 328 4.0E-35 T 13-10-2018 Y11_30771 9db3f1d053193960c9d38ed1652622a0 817 Gene3D G3DSA:2.60.40.2610 642 732 2.2E-35 T 13-10-2018 Y11_30771 9db3f1d053193960c9d38ed1652622a0 817 Pfam PF13954 PapC N-terminal domain 7 151 2.7E-44 T 13-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 Y11_30771 9db3f1d053193960c9d38ed1652622a0 817 Gene3D G3DSA:3.10.20.410 23 140 1.2E-37 T 13-10-2018 Y11_30771 9db3f1d053193960c9d38ed1652622a0 817 Pfam PF00577 Outer membrane usher protein 169 727 4.4E-189 T 13-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 Y11_30771 9db3f1d053193960c9d38ed1652622a0 817 Pfam PF13953 PapC C-terminal domain 736 801 6.8E-25 T 13-10-2018 IPR025949 PapC-like, C-terminal domain Y11_30771 9db3f1d053193960c9d38ed1652622a0 817 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 281 291 - T 13-10-2018 IPR018030 Fimbrial membrane usher, conserved site Y11_30771 9db3f1d053193960c9d38ed1652622a0 817 SUPERFAMILY SSF141729 34 143 1.57E-29 T 13-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 Y11_30771 9db3f1d053193960c9d38ed1652622a0 817 Gene3D G3DSA:2.60.40.2070 733 817 5.3E-26 T 13-10-2018 Y11_42361 7f265c998fad2420d6092567b85744cf 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Y11_42361 7f265c998fad2420d6092567b85744cf 226 SUPERFAMILY SSF54768 109 223 1.29E-27 T 13-10-2018 Y11_42361 7f265c998fad2420d6092567b85744cf 226 Gene3D G3DSA:3.30.160.20 154 224 2.7E-20 T 13-10-2018 Y11_42361 7f265c998fad2420d6092567b85744cf 226 Pfam PF14622 Ribonuclease-III-like 20 142 5.0E-33 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Y11_42361 7f265c998fad2420d6092567b85744cf 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 2.1E-73 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Y11_42361 7f265c998fad2420d6092567b85744cf 226 Gene3D G3DSA:1.10.1520.10 4 146 1.6E-43 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Y11_42361 7f265c998fad2420d6092567b85744cf 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 3.0E-15 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain Y11_42361 7f265c998fad2420d6092567b85744cf 226 SMART SM00358 156 224 1.5E-23 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain Y11_42361 7f265c998fad2420d6092567b85744cf 226 SUPERFAMILY SSF69065 5 159 2.79E-49 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Y11_42361 7f265c998fad2420d6092567b85744cf 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.519 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Y11_42361 7f265c998fad2420d6092567b85744cf 226 SMART SM00535 21 149 3.6E-54 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Y11_24941 6dc047f118de982131ee6281f8bbf6dc 260 SUPERFAMILY SSF53213 5 259 4.32E-93 T 13-10-2018 Y11_24941 6dc047f118de982131ee6281f8bbf6dc 260 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 258 3.3E-32 T 13-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 Y11_24941 6dc047f118de982131ee6281f8bbf6dc 260 Gene3D G3DSA:3.40.830.10 1 260 2.5E-94 T 13-10-2018 Y11_24941 6dc047f118de982131ee6281f8bbf6dc 260 PIRSF PIRSF006157 1 260 8.3E-95 T 13-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 Y11_12431 0774c8099f26051f8c9471ffc0033bcf 401 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 40.693 T 13-10-2018 IPR022855 Multidrug resistance protein MdtH Y11_12431 0774c8099f26051f8c9471ffc0033bcf 401 Pfam PF07690 Major Facilitator Superfamily 20 237 3.0E-23 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_12431 0774c8099f26051f8c9471ffc0033bcf 401 Gene3D G3DSA:1.20.1250.20 13 386 2.6E-48 T 13-10-2018 Y11_12431 0774c8099f26051f8c9471ffc0033bcf 401 SUPERFAMILY SSF103473 14 392 1.1E-53 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_00721 1f79c6a5aad0f730e592ca1633773765 169 Gene3D G3DSA:2.70.70.10 9 169 8.9E-64 T 13-10-2018 IPR011055 Duplicated hybrid motif Y11_00721 1f79c6a5aad0f730e592ca1633773765 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 2.8E-49 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 Y11_00721 1f79c6a5aad0f730e592ca1633773765 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 Y11_00721 1f79c6a5aad0f730e592ca1633773765 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.9E-50 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 Y11_00721 1f79c6a5aad0f730e592ca1633773765 169 SUPERFAMILY SSF51261 12 167 3.84E-56 T 13-10-2018 IPR011055 Duplicated hybrid motif Y11_36131 4152ea0aa892b47f7d95e3274c7f5767 433 SUPERFAMILY SSF52540 197 375 1.26E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_36131 4152ea0aa892b47f7d95e3274c7f5767 433 Gene3D G3DSA:3.40.50.11060 17 138 9.6E-36 T 13-10-2018 Y11_36131 4152ea0aa892b47f7d95e3274c7f5767 433 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 8.6E-29 T 13-10-2018 IPR025121 GTPase HflX, N-terminal Y11_36131 4152ea0aa892b47f7d95e3274c7f5767 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 1.8E-9 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_36131 4152ea0aa892b47f7d95e3274c7f5767 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 1.8E-9 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_36131 4152ea0aa892b47f7d95e3274c7f5767 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 1.8E-9 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_36131 4152ea0aa892b47f7d95e3274c7f5767 433 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.303 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 Y11_36131 4152ea0aa892b47f7d95e3274c7f5767 433 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 2.2E-28 T 13-10-2018 IPR032305 GTP-binding protein, middle domain Y11_36131 4152ea0aa892b47f7d95e3274c7f5767 433 SUPERFAMILY SSF54980 366 422 5.75E-14 T 13-10-2018 IPR035647 EF-G domain III/V-like Y11_36131 4152ea0aa892b47f7d95e3274c7f5767 433 PIRSF PIRSF006809 4 422 9.9E-146 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 Y11_36131 4152ea0aa892b47f7d95e3274c7f5767 433 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.9E-150 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 Y11_36131 4152ea0aa892b47f7d95e3274c7f5767 433 Pfam PF01926 50S ribosome-binding GTPase 200 318 7.5E-20 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Y11_36131 4152ea0aa892b47f7d95e3274c7f5767 433 Gene3D G3DSA:3.40.50.300 197 365 9.3E-38 T 13-10-2018 Y11_41071 469cc31a3e2c5c0a225351d462512877 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 242 4.4E-78 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Y11_41071 469cc31a3e2c5c0a225351d462512877 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 243 39.526 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Y11_41071 469cc31a3e2c5c0a225351d462512877 252 Gene3D G3DSA:3.40.1180.10 4 244 1.7E-90 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Y11_41071 469cc31a3e2c5c0a225351d462512877 252 SUPERFAMILY SSF64005 15 238 8.24E-86 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Y11_41071 469cc31a3e2c5c0a225351d462512877 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 242 9.2E-101 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Y11_41071 469cc31a3e2c5c0a225351d462512877 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 13-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Y11_31441 1701a6e5f0e78b50ac29864ea87a92af 447 SUPERFAMILY SSF53223 6 196 8.32E-74 T 13-10-2018 Y11_31441 1701a6e5f0e78b50ac29864ea87a92af 447 Gene3D G3DSA:3.40.50.720 209 373 2.3E-174 T 13-10-2018 Y11_31441 1701a6e5f0e78b50ac29864ea87a92af 447 SMART SM00839 204 445 1.9E-91 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Y11_31441 1701a6e5f0e78b50ac29864ea87a92af 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 1.7E-50 T 13-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Y11_31441 1701a6e5f0e78b50ac29864ea87a92af 447 Gene3D G3DSA:1.10.285.10 14 374 2.3E-174 T 13-10-2018 Y11_31441 1701a6e5f0e78b50ac29864ea87a92af 447 SUPERFAMILY SSF51735 202 446 1.05E-73 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_31441 1701a6e5f0e78b50ac29864ea87a92af 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 3.5E-33 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Y11_31441 1701a6e5f0e78b50ac29864ea87a92af 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 3.5E-33 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Y11_31441 1701a6e5f0e78b50ac29864ea87a92af 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 3.5E-33 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Y11_31441 1701a6e5f0e78b50ac29864ea87a92af 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 3.5E-33 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Y11_31441 1701a6e5f0e78b50ac29864ea87a92af 447 Gene3D G3DSA:1.10.285.10 401 447 3.9E-10 T 13-10-2018 Y11_31441 1701a6e5f0e78b50ac29864ea87a92af 447 PIRSF PIRSF000185 22 447 2.1E-114 T 13-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 Y11_31441 1701a6e5f0e78b50ac29864ea87a92af 447 Gene3D G3DSA:3.40.50.10860 55 190 2.3E-174 T 13-10-2018 Y11_31441 1701a6e5f0e78b50ac29864ea87a92af 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 13-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Y11_31441 1701a6e5f0e78b50ac29864ea87a92af 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 2.4E-85 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Y11_22751 8d86ba71f426ecdc0c2f5286c91b42f0 321 SMART SM00257 72 116 5.4E-10 T 13-10-2018 IPR018392 LysM domain Y11_22751 8d86ba71f426ecdc0c2f5286c91b42f0 321 SUPERFAMILY SSF51261 72 318 4.18E-50 T 13-10-2018 IPR011055 Duplicated hybrid motif Y11_22751 8d86ba71f426ecdc0c2f5286c91b42f0 321 Pfam PF01551 Peptidase family M23 221 314 3.8E-31 T 13-10-2018 IPR016047 Peptidase M23 Y11_22751 8d86ba71f426ecdc0c2f5286c91b42f0 321 Gene3D G3DSA:2.70.70.10 137 321 7.8E-38 T 13-10-2018 IPR011055 Duplicated hybrid motif Y11_22751 8d86ba71f426ecdc0c2f5286c91b42f0 321 Gene3D G3DSA:3.10.350.10 65 120 1.9E-10 T 13-10-2018 IPR036779 LysM domain superfamily Y11_22751 8d86ba71f426ecdc0c2f5286c91b42f0 321 Pfam PF01476 LysM domain 73 114 6.3E-9 T 13-10-2018 IPR018392 LysM domain Y11_31821 4f5f21cab712be92757f9230c9bfc34a 298 Gene3D G3DSA:1.10.10.10 1 90 6.0E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_31821 4f5f21cab712be92757f9230c9bfc34a 298 Gene3D G3DSA:3.40.190.10 91 287 1.3E-56 T 13-10-2018 Y11_31821 4f5f21cab712be92757f9230c9bfc34a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.0E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_31821 4f5f21cab712be92757f9230c9bfc34a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.0E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_31821 4f5f21cab712be92757f9230c9bfc34a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.0E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_31821 4f5f21cab712be92757f9230c9bfc34a 298 Gene3D G3DSA:3.40.190.10 164 269 1.3E-56 T 13-10-2018 Y11_31821 4f5f21cab712be92757f9230c9bfc34a 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.5E-22 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_31821 4f5f21cab712be92757f9230c9bfc34a 298 SUPERFAMILY SSF53850 88 292 9.77E-34 T 13-10-2018 Y11_31821 4f5f21cab712be92757f9230c9bfc34a 298 Pfam PF03466 LysR substrate binding domain 87 291 2.0E-37 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_31821 4f5f21cab712be92757f9230c9bfc34a 298 SUPERFAMILY SSF46785 1 85 1.18E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_41131 90e688c55faeda60bd019e4a8427f50b 201 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 31 172 37.239 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Y11_41131 90e688c55faeda60bd019e4a8427f50b 201 Gene3D G3DSA:3.10.129.10 28 171 5.8E-68 T 13-10-2018 Y11_41131 90e688c55faeda60bd019e4a8427f50b 201 Pfam PF07977 FabA-like domain 40 164 3.2E-40 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Y11_41131 90e688c55faeda60bd019e4a8427f50b 201 SUPERFAMILY SSF54637 23 174 5.28E-51 T 13-10-2018 IPR029069 HotDog domain superfamily Y11_41131 90e688c55faeda60bd019e4a8427f50b 201 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 31 169 7.3E-60 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Y11_20461 abe2eb9edbf2cf75f2f9489d60ea26c5 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 220 51.117 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Y11_20461 abe2eb9edbf2cf75f2f9489d60ea26c5 232 Gene3D G3DSA:3.40.50.620 1 232 1.0E-82 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_20461 abe2eb9edbf2cf75f2f9489d60ea26c5 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 6.0E-81 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Y11_20461 abe2eb9edbf2cf75f2f9489d60ea26c5 232 SUPERFAMILY SSF52402 1 221 3.31E-67 T 13-10-2018 Y11_20461 abe2eb9edbf2cf75f2f9489d60ea26c5 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 207 1.6E-82 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Y11_20461 abe2eb9edbf2cf75f2f9489d60ea26c5 232 PIRSF PIRSF006293 1 226 6.8E-83 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Y11_24131 dd8fc71e1b9d36d2a292bfc23bddafc7 127 PIRSF PIRSF039090 1 127 7.8E-34 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Y11_24131 dd8fc71e1b9d36d2a292bfc23bddafc7 127 SUPERFAMILY SSF101116 8 123 1.07E-29 T 13-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Y11_24131 dd8fc71e1b9d36d2a292bfc23bddafc7 127 Gene3D G3DSA:1.20.120.340 1 127 4.4E-31 T 13-10-2018 Y11_24131 dd8fc71e1b9d36d2a292bfc23bddafc7 127 TIGRFAM TIGR00208 fliS: flagellar protein FliS 2 123 9.0E-21 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Y11_24131 dd8fc71e1b9d36d2a292bfc23bddafc7 127 Pfam PF02561 Flagellar protein FliS 9 122 1.3E-27 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Y11_06821 d7e0f872d079692b43e4a4ae8986f153 546 Gene3D G3DSA:1.20.1250.20 277 451 5.4E-13 T 13-10-2018 Y11_06821 d7e0f872d079692b43e4a4ae8986f153 546 SUPERFAMILY SSF103473 15 520 1.83E-44 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_06821 d7e0f872d079692b43e4a4ae8986f153 546 Gene3D G3DSA:1.20.1250.20 13 198 1.2E-22 T 13-10-2018 Y11_06821 d7e0f872d079692b43e4a4ae8986f153 546 Pfam PF07690 Major Facilitator Superfamily 23 430 2.0E-37 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_07251 b3c76c38ede07d8a1b49bd69b7d6304c 80 Pfam PF07351 Protein of unknown function (DUF1480) 1 79 1.5E-42 T 13-10-2018 IPR009950 Protein of unknown function DUF1480 Y11_07251 b3c76c38ede07d8a1b49bd69b7d6304c 80 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 3 79 4.0E-29 T 13-10-2018 IPR009950 Protein of unknown function DUF1480 Y11_08931 503bb03df69ab01931314740936125e9 877 Pfam PF11739 Dicarboxylate transport 658 859 5.8E-63 T 13-10-2018 IPR021730 Dicarboxylate transport Y11_10211 0646d9c2d11c0d8fe32ebd0f850d6db5 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.4E-60 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Y11_10211 0646d9c2d11c0d8fe32ebd0f850d6db5 193 PIRSF PIRSF006102 1 193 4.9E-62 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Y11_10211 0646d9c2d11c0d8fe32ebd0f850d6db5 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.47 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Y11_10211 0646d9c2d11c0d8fe32ebd0f850d6db5 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.7E-90 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Y11_18421 e17d73b6d48d9c49946e64b386e16f14 310 SUPERFAMILY SSF160240 212 287 2.35E-9 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Y11_18421 e17d73b6d48d9c49946e64b386e16f14 310 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 288 2.0E-97 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Y11_18421 e17d73b6d48d9c49946e64b386e16f14 310 SUPERFAMILY SSF161111 10 209 1.09E-63 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Y11_18421 e17d73b6d48d9c49946e64b386e16f14 310 Pfam PF01545 Cation efflux family 16 208 3.3E-54 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Y11_18421 e17d73b6d48d9c49946e64b386e16f14 310 Gene3D G3DSA:1.20.1510.10 12 208 4.4E-52 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Y11_07891 ef38ec8ad881d8ce2fdfde588c00fe9c 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 6.7E-107 T 13-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Y11_07891 ef38ec8ad881d8ce2fdfde588c00fe9c 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.77 T 13-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Y11_07891 ef38ec8ad881d8ce2fdfde588c00fe9c 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 3.4E-117 T 13-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Y11_07891 ef38ec8ad881d8ce2fdfde588c00fe9c 327 SUPERFAMILY SSF46589 14 99 8.37E-22 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Y11_07891 ef38ec8ad881d8ce2fdfde588c00fe9c 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 6.5E-25 T 13-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Y11_07891 ef38ec8ad881d8ce2fdfde588c00fe9c 327 Gene3D G3DSA:3.30.930.10 8 327 1.9E-124 T 13-10-2018 Y11_07891 ef38ec8ad881d8ce2fdfde588c00fe9c 327 SUPERFAMILY SSF55681 92 327 6.56E-82 T 13-10-2018 Y11_03341 77c79b0e532985331b323c78ca99d33e 281 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Y11_03341 77c79b0e532985331b323c78ca99d33e 281 SMART SM00518 3 279 1.1E-130 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Y11_03341 77c79b0e532985331b323c78ca99d33e 281 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 2.3E-108 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Y11_03341 77c79b0e532985331b323c78ca99d33e 281 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Y11_03341 77c79b0e532985331b323c78ca99d33e 281 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 43.345 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Y11_03341 77c79b0e532985331b323c78ca99d33e 281 Gene3D G3DSA:3.20.20.150 1 280 1.9E-110 T 13-10-2018 Y11_03341 77c79b0e532985331b323c78ca99d33e 281 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Y11_03341 77c79b0e532985331b323c78ca99d33e 281 Pfam PF01261 Xylose isomerase-like TIM barrel 20 239 4.2E-42 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Y11_03341 77c79b0e532985331b323c78ca99d33e 281 SUPERFAMILY SSF51658 1 278 4.06E-100 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily Y11_19041 17e82ca2d6924a91f14b7a0fbdec5218 554 SUPERFAMILY SSF52402 212 483 2.38E-74 T 13-10-2018 Y11_19041 17e82ca2d6924a91f14b7a0fbdec5218 554 PIRSF PIRSF001589 1 368 9.5E-108 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Y11_19041 17e82ca2d6924a91f14b7a0fbdec5218 554 PIRSF PIRSF001589 363 507 5.0E-28 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Y11_19041 17e82ca2d6924a91f14b7a0fbdec5218 554 SUPERFAMILY SSF56235 1 196 8.58E-58 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_19041 17e82ca2d6924a91f14b7a0fbdec5218 554 Gene3D G3DSA:3.60.20.10 2 193 5.5E-75 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_19041 17e82ca2d6924a91f14b7a0fbdec5218 554 Pfam PF00733 Asparagine synthase 211 366 2.0E-58 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Y11_19041 17e82ca2d6924a91f14b7a0fbdec5218 554 Gene3D G3DSA:3.40.50.620 194 514 3.6E-114 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_19041 17e82ca2d6924a91f14b7a0fbdec5218 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 4.2E-40 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Y11_19041 17e82ca2d6924a91f14b7a0fbdec5218 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 1.3E-122 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Y11_39291 aee20d6cdd19734b14c602271513c871 254 SUPERFAMILY SSF46785 5 76 2.45E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_39291 aee20d6cdd19734b14c602271513c871 254 SUPERFAMILY SSF48008 95 235 8.63E-22 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Y11_39291 aee20d6cdd19734b14c602271513c871 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.7E-22 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_39291 aee20d6cdd19734b14c602271513c871 254 Gene3D G3DSA:1.10.10.10 1 75 5.4E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_39291 aee20d6cdd19734b14c602271513c871 254 SMART SM00345 15 74 1.6E-26 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_39291 aee20d6cdd19734b14c602271513c871 254 Gene3D G3DSA:1.20.120.530 97 236 1.2E-29 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Y11_39291 aee20d6cdd19734b14c602271513c871 254 Pfam PF07729 FCD domain 99 226 2.5E-19 T 13-10-2018 IPR011711 GntR, C-terminal Y11_39291 aee20d6cdd19734b14c602271513c871 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.0E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_39291 aee20d6cdd19734b14c602271513c871 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.0E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_39291 aee20d6cdd19734b14c602271513c871 254 SMART SM00895 99 227 1.6E-19 T 13-10-2018 IPR011711 GntR, C-terminal Y11_04261 5a5bff35ba935957ab48436181fdb0df 468 Pfam PF07063 Domain of unknown function (DUF1338) 12 414 1.9E-116 T 13-10-2018 IPR009770 Domain of unknown function DUF1338 Y11_04261 5a5bff35ba935957ab48436181fdb0df 468 SMART SM01150 13 414 6.8E-223 T 13-10-2018 IPR009770 Domain of unknown function DUF1338 Y11_04261 5a5bff35ba935957ab48436181fdb0df 468 Gene3D G3DSA:3.10.180.80 4 451 6.4E-188 T 13-10-2018 Y11_32191 810d44d760e0b362123c8d42f27ddada 539 PIRSF PIRSF006294 3 539 2.8E-230 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Y11_32191 810d44d760e0b362123c8d42f27ddada 539 Gene3D G3DSA:3.90.228.20 234 524 2.7E-238 T 13-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Y11_32191 810d44d760e0b362123c8d42f27ddada 539 Gene3D G3DSA:3.40.449.10 22 233 2.7E-238 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Y11_32191 810d44d760e0b362123c8d42f27ddada 539 SUPERFAMILY SSF53795 228 539 1.97E-128 T 13-10-2018 Y11_32191 810d44d760e0b362123c8d42f27ddada 539 Gene3D G3DSA:2.170.8.10 46 349 2.7E-238 T 13-10-2018 Y11_32191 810d44d760e0b362123c8d42f27ddada 539 SUPERFAMILY SSF68923 8 226 4.71E-92 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Y11_32191 810d44d760e0b362123c8d42f27ddada 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 539 2.4E-286 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Y11_32191 810d44d760e0b362123c8d42f27ddada 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 489 2.2E-211 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Y11_32191 810d44d760e0b362123c8d42f27ddada 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 13-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Y11_32191 810d44d760e0b362123c8d42f27ddada 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 15 537 55.269 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Y11_05301 d1651edb7e745424154a363fa035dbb6 400 SUPERFAMILY SSF53901 203 399 1.61E-71 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_05301 d1651edb7e745424154a363fa035dbb6 400 SMART SM00825 Beta-ketoacyl synthase 5 400 4.9E-14 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Y11_05301 d1651edb7e745424154a363fa035dbb6 400 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 1 398 3.7E-187 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Y11_05301 d1651edb7e745424154a363fa035dbb6 400 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 235 9.5E-57 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Y11_05301 d1651edb7e745424154a363fa035dbb6 400 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 243 356 6.7E-39 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Y11_05301 d1651edb7e745424154a363fa035dbb6 400 Gene3D G3DSA:3.40.47.10 1 243 1.7E-81 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_05301 d1651edb7e745424154a363fa035dbb6 400 SUPERFAMILY SSF53901 2 240 2.2E-72 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_05301 d1651edb7e745424154a363fa035dbb6 400 Gene3D G3DSA:3.40.47.10 249 400 1.4E-55 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_05301 d1651edb7e745424154a363fa035dbb6 400 PIRSF PIRSF000447 1 400 6.4E-193 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Y11_05301 d1651edb7e745424154a363fa035dbb6 400 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 143 159 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site Y11_14331 e1e92cac931751ce0afd60ed5f028e37 326 Gene3D G3DSA:1.20.1330.10 40 272 2.9E-66 T 13-10-2018 Y11_14331 e1e92cac931751ce0afd60ed5f028e37 326 SUPERFAMILY SSF64518 2 324 5.89E-57 T 13-10-2018 Y11_14331 e1e92cac931751ce0afd60ed5f028e37 326 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 198 8.1E-68 T 13-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 Y11_14331 e1e92cac931751ce0afd60ed5f028e37 326 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 139 2.1E-22 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Y11_02131 6ee6cd4416eef94d924e0c29f6c733e6 404 Gene3D G3DSA:3.90.1150.10 21 398 4.1E-147 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_02131 6ee6cd4416eef94d924e0c29f6c733e6 404 Pfam PF00155 Aminotransferase class I and II 58 392 6.1E-46 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_02131 6ee6cd4416eef94d924e0c29f6c733e6 404 SUPERFAMILY SSF53383 7 401 1.06E-94 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_02131 6ee6cd4416eef94d924e0c29f6c733e6 404 Gene3D G3DSA:3.40.640.10 53 294 4.1E-147 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_p0801 98c9d6062587fa694e7dcdfe844428b1 92 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 3 84 1.6E-28 T 13-10-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related Y11_p0801 98c9d6062587fa694e7dcdfe844428b1 92 Gene3D G3DSA:1.20.1280.80 1 92 9.1E-42 T 13-10-2018 IPR038347 TyeA superfamily Y11_p0801 98c9d6062587fa694e7dcdfe844428b1 92 Pfam PF09059 TyeA 6 86 5.1E-33 T 13-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA Y11_p0801 98c9d6062587fa694e7dcdfe844428b1 92 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 81 6.0E-43 T 13-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA Y11_p0801 98c9d6062587fa694e7dcdfe844428b1 92 SUPERFAMILY SSF140591 2 90 1.65E-29 T 13-10-2018 Y11_39661 62d34a5686fff4343f49c4be74e7bcfa 426 SUPERFAMILY SSF53383 2 425 7.06E-134 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_39661 62d34a5686fff4343f49c4be74e7bcfa 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Y11_39661 62d34a5686fff4343f49c4be74e7bcfa 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 106.368 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Y11_39661 62d34a5686fff4343f49c4be74e7bcfa 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 2.9E-200 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Y11_39661 62d34a5686fff4343f49c4be74e7bcfa 426 Gene3D G3DSA:3.40.640.10 69 317 1.9E-176 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_39661 62d34a5686fff4343f49c4be74e7bcfa 426 Gene3D G3DSA:3.90.1150.10 7 419 1.9E-176 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_39661 62d34a5686fff4343f49c4be74e7bcfa 426 Pfam PF00202 Aminotransferase class-III 32 395 6.1E-76 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Y11_10991 7880c223b937daed96e163406f614455 545 Gene3D G3DSA:3.10.105.10 299 514 2.4E-210 T 13-10-2018 Y11_10991 7880c223b937daed96e163406f614455 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 465 2.8E-87 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain Y11_10991 7880c223b937daed96e163406f614455 545 SUPERFAMILY SSF53850 37 527 1.21E-147 T 13-10-2018 Y11_10991 7880c223b937daed96e163406f614455 545 PIRSF PIRSF002741 4 544 1.1E-114 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Y11_10991 7880c223b937daed96e163406f614455 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 110 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site Y11_10991 7880c223b937daed96e163406f614455 545 Gene3D G3DSA:3.90.76.10 73 196 2.4E-210 T 13-10-2018 Y11_10991 7880c223b937daed96e163406f614455 545 Gene3D G3DSA:3.40.190.10 43 526 2.4E-210 T 13-10-2018 Y11_04701 c651eb83fd6d4089b6b646dc1f213a34 152 Pfam PF02142 MGS-like domain 26 118 1.1E-18 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Y11_04701 c651eb83fd6d4089b6b646dc1f213a34 152 PIRSF PIRSF006614 8 151 3.1E-65 T 13-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Y11_04701 c651eb83fd6d4089b6b646dc1f213a34 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 3.8E-66 T 13-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Y11_04701 c651eb83fd6d4089b6b646dc1f213a34 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.795 T 13-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Y11_04701 c651eb83fd6d4089b6b646dc1f213a34 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 72 - T 13-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Y11_04701 c651eb83fd6d4089b6b646dc1f213a34 152 Gene3D G3DSA:3.40.50.1380 1 152 1.1E-68 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Y11_04701 c651eb83fd6d4089b6b646dc1f213a34 152 SUPERFAMILY SSF52335 6 151 1.01E-57 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Y11_04701 c651eb83fd6d4089b6b646dc1f213a34 152 SMART SM00851 25 118 8.4E-27 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Y11_40161 53c79e6f6da7f3ee79a5ed5ae8048bc1 132 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 4 48 9.9E-16 T 13-10-2018 IPR022453 Zinc finger, MqsA-type Y11_40161 53c79e6f6da7f3ee79a5ed5ae8048bc1 132 SMART SM00530 74 128 6.6E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_40161 53c79e6f6da7f3ee79a5ed5ae8048bc1 132 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 2 132 1.9E-60 T 13-10-2018 IPR032758 Antitoxin MqsA/HigA-2 Y11_40161 53c79e6f6da7f3ee79a5ed5ae8048bc1 132 SUPERFAMILY SSF47413 64 121 6.66E-8 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_40161 53c79e6f6da7f3ee79a5ed5ae8048bc1 132 Gene3D G3DSA:1.20.58.720 1 64 1.5E-27 T 13-10-2018 Y11_40161 53c79e6f6da7f3ee79a5ed5ae8048bc1 132 TIGRFAM TIGR03830 CxxCG_CxxCG_HTH: putative zinc finger/helix-turn-helix protein, YgiT family 4 132 2.8E-43 T 13-10-2018 IPR022452 Antitoxin MqsA Y11_40161 53c79e6f6da7f3ee79a5ed5ae8048bc1 132 Gene3D G3DSA:1.10.260.40 65 132 1.2E-21 T 13-10-2018 Y11_30331 961f3c5a0588f2e6cf93a2b196427185 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 8.5E-210 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_30331 961f3c5a0588f2e6cf93a2b196427185 689 SUPERFAMILY SSF109604 339 538 8.48E-16 T 13-10-2018 Y11_30331 961f3c5a0588f2e6cf93a2b196427185 689 Pfam PF05746 DALR anticodon binding domain 582 679 7.0E-9 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Y11_30331 961f3c5a0588f2e6cf93a2b196427185 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.552 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_30331 961f3c5a0588f2e6cf93a2b196427185 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_30331 961f3c5a0588f2e6cf93a2b196427185 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 7.8E-37 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_30331 961f3c5a0588f2e6cf93a2b196427185 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 7.8E-37 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_30331 961f3c5a0588f2e6cf93a2b196427185 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 7.8E-37 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_30331 961f3c5a0588f2e6cf93a2b196427185 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 7.8E-37 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_30331 961f3c5a0588f2e6cf93a2b196427185 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 7.8E-37 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Y11_06701 00363c5c5b9c04b0e0ec9b549f9f19a0 341 Gene3D G3DSA:3.30.420.40 202 255 5.8E-18 T 13-10-2018 Y11_06701 00363c5c5b9c04b0e0ec9b549f9f19a0 341 Pfam PF00480 ROK family 117 238 1.8E-8 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Y11_06701 00363c5c5b9c04b0e0ec9b549f9f19a0 341 Gene3D G3DSA:3.30.420.40 99 201 5.8E-18 T 13-10-2018 Y11_06701 00363c5c5b9c04b0e0ec9b549f9f19a0 341 SUPERFAMILY SSF46785 13 79 1.36E-7 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_06701 00363c5c5b9c04b0e0ec9b549f9f19a0 341 SUPERFAMILY SSF53067 80 196 5.3E-12 T 13-10-2018 Y11_06701 00363c5c5b9c04b0e0ec9b549f9f19a0 341 Gene3D G3DSA:1.10.10.10 6 76 1.9E-10 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_07291 7a7039122154036269aa8fdb4bdd03a4 249 Gene3D G3DSA:2.60.40.10 35 156 2.9E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_07291 7a7039122154036269aa8fdb4bdd03a4 249 SUPERFAMILY SSF49354 23 155 1.31E-27 T 13-10-2018 IPR008962 PapD-like superfamily Y11_07291 7a7039122154036269aa8fdb4bdd03a4 249 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 155 2.5E-20 T 13-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Y11_20641 4dd3727ced3271284c6a9e0927c2bc89 115 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 25 98 9.7E-19 T 13-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 Y11_20641 4dd3727ced3271284c6a9e0927c2bc89 115 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 18 113 6.5E-40 T 13-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 Y11_15541 ba9013467369756bab03f9bf26d823e1 266 Pfam PF00977 Histidine biosynthesis protein 85 248 1.8E-6 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Y11_15541 ba9013467369756bab03f9bf26d823e1 266 SUPERFAMILY SSF51366 24 248 2.2E-20 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Y11_15541 ba9013467369756bab03f9bf26d823e1 266 Gene3D G3DSA:3.20.20.70 1 266 2.1E-122 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_01951 b65d0cead5c8be0c1f3a9ae9dc77329f 181 SUPERFAMILY SSF56300 2 160 8.46E-36 T 13-10-2018 Y11_01951 b65d0cead5c8be0c1f3a9ae9dc77329f 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 158 3.0E-21 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Y11_01951 b65d0cead5c8be0c1f3a9ae9dc77329f 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 163 5.0E-37 T 13-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 Y11_01951 b65d0cead5c8be0c1f3a9ae9dc77329f 181 Gene3D G3DSA:3.60.21.10 1 180 5.3E-66 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Y11_01951 b65d0cead5c8be0c1f3a9ae9dc77329f 181 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 117 141 - T 13-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site Y11_12201 b64559ce7e875c7478d4b172f6e80066 360 Gene3D G3DSA:2.40.160.10 23 360 1.6E-136 T 13-10-2018 IPR023614 Porin domain superfamily Y11_12201 b64559ce7e875c7478d4b172f6e80066 360 SUPERFAMILY SSF56935 23 360 1.44E-73 T 13-10-2018 Y11_12201 b64559ce7e875c7478d4b172f6e80066 360 Pfam PF00267 Gram-negative porin 28 360 1.9E-129 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_12201 b64559ce7e875c7478d4b172f6e80066 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 1.1E-13 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_12201 b64559ce7e875c7478d4b172f6e80066 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 315 332 1.1E-13 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_12201 b64559ce7e875c7478d4b172f6e80066 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 51 62 1.1E-13 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_12201 b64559ce7e875c7478d4b172f6e80066 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 237 249 1.1E-13 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_12201 b64559ce7e875c7478d4b172f6e80066 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.1E-13 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Y11_12201 b64559ce7e875c7478d4b172f6e80066 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 6.3E-54 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_12201 b64559ce7e875c7478d4b172f6e80066 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 6.3E-54 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_12201 b64559ce7e875c7478d4b172f6e80066 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 243 260 6.3E-54 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_12201 b64559ce7e875c7478d4b172f6e80066 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 271 290 6.3E-54 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_12201 b64559ce7e875c7478d4b172f6e80066 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 6.3E-54 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Y11_32291 99fb6268fe59904cb83a1874eacd6e32 182 Pfam PF05137 Fimbrial assembly protein (PilN) 101 164 1.4E-10 T 13-10-2018 IPR007813 Fimbrial assembly PilN Y11_31571 8b44f0c4c6dd8d48e013908515832c8c 260 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 239 6.6E-91 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_31571 8b44f0c4c6dd8d48e013908515832c8c 260 Gene3D G3DSA:3.30.950.10 120 257 5.1E-42 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Y11_31571 8b44f0c4c6dd8d48e013908515832c8c 260 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 215 6.2E-42 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Y11_31571 8b44f0c4c6dd8d48e013908515832c8c 260 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_31571 8b44f0c4c6dd8d48e013908515832c8c 260 Gene3D G3DSA:3.40.1010.10 3 119 3.0E-39 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Y11_31571 8b44f0c4c6dd8d48e013908515832c8c 260 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_31571 8b44f0c4c6dd8d48e013908515832c8c 260 SUPERFAMILY SSF53790 2 238 1.44E-71 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Y11_34351 eab7f55c6ac8d0b3d86fbe5a44aaed2a 255 SMART SM00382 31 231 2.7E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_34351 eab7f55c6ac8d0b3d86fbe5a44aaed2a 255 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_34351 eab7f55c6ac8d0b3d86fbe5a44aaed2a 255 Gene3D G3DSA:3.40.50.300 5 253 4.7E-61 T 13-10-2018 Y11_34351 eab7f55c6ac8d0b3d86fbe5a44aaed2a 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 234 254 6.3E-9 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Y11_34351 eab7f55c6ac8d0b3d86fbe5a44aaed2a 255 SUPERFAMILY SSF52540 5 253 4.26E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_34351 eab7f55c6ac8d0b3d86fbe5a44aaed2a 255 Pfam PF00005 ABC transporter 23 182 6.7E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_26321 206779735ac24d6f3f6ac319c1bc53b1 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 13-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 Y11_26321 206779735ac24d6f3f6ac319c1bc53b1 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.268 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Y11_26321 206779735ac24d6f3f6ac319c1bc53b1 142 Pfam PF00572 Ribosomal protein L13 15 138 2.9E-56 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Y11_26321 206779735ac24d6f3f6ac319c1bc53b1 142 PIRSF PIRSF002181 1 142 1.2E-50 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Y11_26321 206779735ac24d6f3f6ac319c1bc53b1 142 SUPERFAMILY SSF52161 1 140 3.4E-60 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Y11_26321 206779735ac24d6f3f6ac319c1bc53b1 142 Gene3D G3DSA:3.90.1180.10 1 142 1.7E-64 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Y11_26321 206779735ac24d6f3f6ac319c1bc53b1 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 6.3E-67 T 13-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_26291 c206ae6b38332c83b0db9f88ebbabdad 213 Gene3D G3DSA:3.40.30.10 11 202 1.4E-81 T 13-10-2018 Y11_26291 c206ae6b38332c83b0db9f88ebbabdad 213 Gene3D G3DSA:1.20.1050.10 89 193 1.4E-81 T 13-10-2018 Y11_26291 c206ae6b38332c83b0db9f88ebbabdad 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 1.4E-17 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Y11_26291 c206ae6b38332c83b0db9f88ebbabdad 213 SUPERFAMILY SSF52833 11 110 1.39E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_26291 c206ae6b38332c83b0db9f88ebbabdad 213 SUPERFAMILY SSF47616 82 208 2.84E-27 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Y11_26291 c206ae6b38332c83b0db9f88ebbabdad 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 194 1.3E-12 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal Y11_16301 8f4c6c418eee05b0c8361d4fcbf7e6c3 467 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 33 172 1.3E-37 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_16301 8f4c6c418eee05b0c8361d4fcbf7e6c3 467 Gene3D G3DSA:3.40.50.11540 38 179 1.2E-13 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_16301 8f4c6c418eee05b0c8361d4fcbf7e6c3 467 Pfam PF13375 RnfC Barrel sandwich hybrid domain 395 459 4.6E-17 T 13-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Y11_16301 8f4c6c418eee05b0c8361d4fcbf7e6c3 467 Pfam PF13534 4Fe-4S dicluster domain 276 336 5.6E-8 T 13-10-2018 Y11_16301 8f4c6c418eee05b0c8361d4fcbf7e6c3 467 Gene3D G3DSA:3.10.20.600 182 246 4.7E-5 T 13-10-2018 Y11_16301 8f4c6c418eee05b0c8361d4fcbf7e6c3 467 SUPERFAMILY SSF46548 226 355 7.5E-12 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Y11_16301 8f4c6c418eee05b0c8361d4fcbf7e6c3 467 PIRSF PIRSF036408 24 463 2.0E-181 T 13-10-2018 IPR017054 Propanediol utilization protein, PduS, predicted Y11_16301 8f4c6c418eee05b0c8361d4fcbf7e6c3 467 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 276 287 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_16301 8f4c6c418eee05b0c8361d4fcbf7e6c3 467 SUPERFAMILY SSF142984 184 252 7.45E-14 T 13-10-2018 Y11_16301 8f4c6c418eee05b0c8361d4fcbf7e6c3 467 SUPERFAMILY SSF142019 21 190 1.14E-44 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_16301 8f4c6c418eee05b0c8361d4fcbf7e6c3 467 Pfam PF10531 SLBB domain 186 231 5.2E-11 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_30551 90a3787e89cf8fa510b0ca3a90759d40 308 Gene3D G3DSA:1.10.10.60 214 307 4.9E-15 T 13-10-2018 Y11_30551 90a3787e89cf8fa510b0ca3a90759d40 308 Pfam PF01965 DJ-1/PfpI family 4 173 5.8E-12 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Y11_30551 90a3787e89cf8fa510b0ca3a90759d40 308 Pfam PF12833 Helix-turn-helix domain 237 301 1.6E-11 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_30551 90a3787e89cf8fa510b0ca3a90759d40 308 SUPERFAMILY SSF46689 213 263 3.63E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_30551 90a3787e89cf8fa510b0ca3a90759d40 308 SUPERFAMILY SSF52317 3 195 1.15E-32 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_30551 90a3787e89cf8fa510b0ca3a90759d40 308 Gene3D G3DSA:3.40.50.880 1 213 7.7E-46 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_30551 90a3787e89cf8fa510b0ca3a90759d40 308 SMART SM00342 230 306 1.0E-6 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_03411 ae8027f17a4fd70c8bd14cbf8f0a5260 262 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_03411 ae8027f17a4fd70c8bd14cbf8f0a5260 262 SMART SM00382 30 215 1.5E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_03411 ae8027f17a4fd70c8bd14cbf8f0a5260 262 Gene3D G3DSA:3.40.50.300 5 254 2.7E-56 T 13-10-2018 Y11_03411 ae8027f17a4fd70c8bd14cbf8f0a5260 262 SUPERFAMILY SSF52540 5 229 1.47E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_03411 ae8027f17a4fd70c8bd14cbf8f0a5260 262 Pfam PF00005 ABC transporter 28 165 1.3E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_11381 62251f54d7ab1a4f4f779c42bff2f86c 290 PIRSF PIRSF006232 2 290 2.9E-92 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Y11_11381 62251f54d7ab1a4f4f779c42bff2f86c 290 Gene3D G3DSA:2.60.120.10 149 253 4.7E-85 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_11381 62251f54d7ab1a4f4f779c42bff2f86c 290 Pfam PF05726 Pirin C-terminal cupin domain 182 284 2.9E-29 T 13-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 Y11_11381 62251f54d7ab1a4f4f779c42bff2f86c 290 SUPERFAMILY SSF51182 4 288 4.5E-87 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_11381 62251f54d7ab1a4f4f779c42bff2f86c 290 Pfam PF02678 Pirin 21 127 2.6E-34 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Y11_11381 62251f54d7ab1a4f4f779c42bff2f86c 290 Gene3D G3DSA:2.60.120.10 17 279 4.7E-85 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_28051 827d3076983507c0fb097d4a21a343fd 829 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 174 6.0E-16 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Y11_28051 827d3076983507c0fb097d4a21a343fd 829 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 49 829 4.6E-167 T 13-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 Y11_28051 827d3076983507c0fb097d4a21a343fd 829 SUPERFAMILY SSF56935 70 829 4.58E-81 T 13-10-2018 Y11_28051 827d3076983507c0fb097d4a21a343fd 829 Pfam PF00593 TonB dependent receptor 299 828 1.9E-33 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Y11_28051 827d3076983507c0fb097d4a21a343fd 829 Gene3D G3DSA:2.40.170.20 190 829 7.2E-136 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Y11_28051 827d3076983507c0fb097d4a21a343fd 829 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 50 829 3.7E-123 T 13-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 Y11_28051 827d3076983507c0fb097d4a21a343fd 829 Gene3D G3DSA:2.170.130.10 62 189 4.4E-46 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Y11_02781 86b899c810ea9050104a2c992ec82984 329 Gene3D G3DSA:3.60.15.10 50 328 3.5E-84 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_02781 86b899c810ea9050104a2c992ec82984 329 Pfam PF12706 Beta-lactamase superfamily domain 89 286 1.9E-41 T 13-10-2018 IPR001279 Metallo-beta-lactamase Y11_02781 86b899c810ea9050104a2c992ec82984 329 PIRSF PIRSF038896 3 328 8.0E-97 T 13-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 Y11_02781 86b899c810ea9050104a2c992ec82984 329 SUPERFAMILY SSF56281 66 293 1.27E-36 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_03181 d02575242aebc00ec64990569b5eaee1 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 5.5E-98 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_03181 d02575242aebc00ec64990569b5eaee1 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 5.5E-98 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_03181 d02575242aebc00ec64990569b5eaee1 414 PRINTS PR00166 Aromatic amino acid permease signature 19 42 5.5E-98 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_03181 d02575242aebc00ec64990569b5eaee1 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 5.5E-98 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_03181 d02575242aebc00ec64990569b5eaee1 414 PRINTS PR00166 Aromatic amino acid permease signature 91 111 5.5E-98 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_03181 d02575242aebc00ec64990569b5eaee1 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 5.5E-98 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_03181 d02575242aebc00ec64990569b5eaee1 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 5.5E-98 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_03181 d02575242aebc00ec64990569b5eaee1 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 5.5E-98 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_03181 d02575242aebc00ec64990569b5eaee1 414 PRINTS PR00166 Aromatic amino acid permease signature 46 65 5.5E-98 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_03181 d02575242aebc00ec64990569b5eaee1 414 PIRSF PIRSF006060 13 413 4.8E-10 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_03181 d02575242aebc00ec64990569b5eaee1 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 16 395 3.8E-148 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Y11_03181 d02575242aebc00ec64990569b5eaee1 414 Gene3D G3DSA:1.20.1740.10 11 414 4.6E-6 T 13-10-2018 Y11_03181 d02575242aebc00ec64990569b5eaee1 414 Pfam PF03222 Tryptophan/tyrosine permease family 11 402 2.4E-144 T 13-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 Y11_23641 2961f13a428c0be5fc221390c5fb4f19 349 Pfam PF13533 Biotin-lipoyl like 51 99 6.7E-14 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Y11_23641 2961f13a428c0be5fc221390c5fb4f19 349 SUPERFAMILY SSF111369 124 263 4.05E-9 T 13-10-2018 Y11_23641 2961f13a428c0be5fc221390c5fb4f19 349 Gene3D G3DSA:2.40.30.170 228 347 3.5E-27 T 13-10-2018 Y11_23641 2961f13a428c0be5fc221390c5fb4f19 349 SUPERFAMILY SSF111369 50 111 6.15E-10 T 13-10-2018 Y11_23641 2961f13a428c0be5fc221390c5fb4f19 349 Gene3D G3DSA:2.40.50.100 50 84 8.5E-14 T 13-10-2018 Y11_23641 2961f13a428c0be5fc221390c5fb4f19 349 Gene3D G3DSA:1.10.287.470 118 185 2.2E-6 T 13-10-2018 Y11_23641 2961f13a428c0be5fc221390c5fb4f19 349 Gene3D G3DSA:1.10.287.470 85 114 8.5E-14 T 13-10-2018 Y11_23641 2961f13a428c0be5fc221390c5fb4f19 349 Pfam PF13437 HlyD family secretion protein 214 329 1.9E-10 T 13-10-2018 Y11_19331 709a3add025c024dde5716e1680c4560 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.089 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Y11_19331 709a3add025c024dde5716e1680c4560 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 120 1.7E-36 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Y11_19331 709a3add025c024dde5716e1680c4560 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 116 2.3E-24 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Y11_31101 54e833350b2ea6fc3bd7970b6964a09f 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 1.8E-107 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain Y11_31101 54e833350b2ea6fc3bd7970b6964a09f 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site Y11_31101 54e833350b2ea6fc3bd7970b6964a09f 535 Gene3D G3DSA:3.10.105.10 292 510 1.4E-196 T 13-10-2018 Y11_31101 54e833350b2ea6fc3bd7970b6964a09f 535 SUPERFAMILY SSF53850 29 534 1.38E-161 T 13-10-2018 Y11_31101 54e833350b2ea6fc3bd7970b6964a09f 535 Gene3D G3DSA:3.90.76.10 50 210 1.4E-196 T 13-10-2018 Y11_31101 54e833350b2ea6fc3bd7970b6964a09f 535 PIRSF PIRSF002741 22 534 1.3E-119 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Y11_31101 54e833350b2ea6fc3bd7970b6964a09f 535 Gene3D G3DSA:3.40.190.10 211 523 1.4E-196 T 13-10-2018 Y11_08681 f002bc2a64f75eded9dd6098a6f4c6dc 292 Gene3D G3DSA:3.90.210.10 57 285 3.2E-57 T 13-10-2018 Y11_08681 f002bc2a64f75eded9dd6098a6f4c6dc 292 SUPERFAMILY SSF56399 58 287 1.37E-70 T 13-10-2018 Y11_08681 f002bc2a64f75eded9dd6098a6f4c6dc 292 Pfam PF02917 Pertussis toxin, subunit 1 59 215 1.6E-18 T 13-10-2018 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 Y11_08681 f002bc2a64f75eded9dd6098a6f4c6dc 292 PRINTS PR01395 Bordetella pertussis toxin A subunit signature 57 80 3.2E-7 T 13-10-2018 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 Y11_08681 f002bc2a64f75eded9dd6098a6f4c6dc 292 PRINTS PR01395 Bordetella pertussis toxin A subunit signature 181 205 3.2E-7 T 13-10-2018 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 Y11_08681 f002bc2a64f75eded9dd6098a6f4c6dc 292 PRINTS PR01395 Bordetella pertussis toxin A subunit signature 132 153 3.2E-7 T 13-10-2018 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 Y11_29231 1dd375d8adf84146ca8c9614b11a544e 461 TIGRFAM TIGR03173 pbuX: xanthine permease 38 458 7.1E-128 T 13-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 Y11_29231 1dd375d8adf84146ca8c9614b11a544e 461 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 28 456 4.3E-140 T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Y11_29231 1dd375d8adf84146ca8c9614b11a544e 461 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 374 394 - T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Y11_29231 1dd375d8adf84146ca8c9614b11a544e 461 Pfam PF00860 Permease family 33 425 2.0E-108 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Y11_20771 dd41203a8988a4da13a9349660328978 138 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 4 135 23.885 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 Y11_20771 dd41203a8988a4da13a9349660328978 138 Gene3D G3DSA:1.10.940.10 1 138 1.3E-53 T 13-10-2018 IPR035926 NusB-like superfamily Y11_20771 dd41203a8988a4da13a9349660328978 138 Pfam PF01029 NusB family 7 131 4.3E-36 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Y11_20771 dd41203a8988a4da13a9349660328978 138 SUPERFAMILY SSF48013 3 135 1.57E-43 T 13-10-2018 IPR035926 NusB-like superfamily Y11_20771 dd41203a8988a4da13a9349660328978 138 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 132 2.4E-46 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 Y11_23571 d39404d4023fee58b7400b5cd00329eb 357 Gene3D G3DSA:3.60.60.10 26 347 3.4E-128 T 13-10-2018 Y11_23571 d39404d4023fee58b7400b5cd00329eb 357 SUPERFAMILY SSF56235 29 326 1.08E-95 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_23571 d39404d4023fee58b7400b5cd00329eb 357 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 29 315 5.8E-47 T 13-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal Y11_34311 066750da2793fef47364c6690ae46632 130 Pfam PF12568 Acetyltransferase (GNAT) domain 2 129 7.8E-54 T 13-10-2018 IPR000182 GNAT domain Y11_34311 066750da2793fef47364c6690ae46632 130 SUPERFAMILY SSF55729 9 123 4.46E-12 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_34311 066750da2793fef47364c6690ae46632 130 Gene3D G3DSA:3.40.630.30 1 130 1.7E-41 T 13-10-2018 Y11_34311 066750da2793fef47364c6690ae46632 130 Hamap MF_02018 PanD regulatory factor [panZ]. 1 130 34.056 T 13-10-2018 IPR032900 PanD regulatory factor PanZ GO:0015940|GO:0031638 Y11_18221 3fff15eecff8d78e7aa58f7b8d4e19c2 354 SMART SM00382 23 206 8.0E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_18221 3fff15eecff8d78e7aa58f7b8d4e19c2 354 Gene3D G3DSA:3.40.50.300 12 241 1.8E-53 T 13-10-2018 Y11_18221 3fff15eecff8d78e7aa58f7b8d4e19c2 354 SUPERFAMILY SSF50331 235 350 3.97E-22 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Y11_18221 3fff15eecff8d78e7aa58f7b8d4e19c2 354 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 1.9E-149 T 13-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 Y11_18221 3fff15eecff8d78e7aa58f7b8d4e19c2 354 SUPERFAMILY SSF52540 8 221 9.15E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_18221 3fff15eecff8d78e7aa58f7b8d4e19c2 354 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_18221 3fff15eecff8d78e7aa58f7b8d4e19c2 354 Pfam PF03459 TOBE domain 290 349 1.1E-15 T 13-10-2018 IPR005116 Transport-associated OB, type 1 Y11_18221 3fff15eecff8d78e7aa58f7b8d4e19c2 354 Pfam PF00005 ABC transporter 16 156 6.0E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_18221 3fff15eecff8d78e7aa58f7b8d4e19c2 354 Gene3D G3DSA:2.40.50.100 289 350 1.9E-13 T 13-10-2018 Y11_31551 0e0a1f2cff7335611e87d489592dd7bf 148 Gene3D G3DSA:3.40.50.280 1 148 5.8E-33 T 13-10-2018 Y11_31551 0e0a1f2cff7335611e87d489592dd7bf 148 Hamap MF_00526 Glutamate mutase sigma subunit [glmS]. 1 137 36.098 T 13-10-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Y11_31551 0e0a1f2cff7335611e87d489592dd7bf 148 TIGRFAM TIGR01501 MthylAspMutase: methylaspartate mutase, S subunit 4 135 9.1E-67 T 13-10-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Y11_31551 0e0a1f2cff7335611e87d489592dd7bf 148 Pfam PF02310 B12 binding domain 5 95 1.1E-11 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Y11_31551 0e0a1f2cff7335611e87d489592dd7bf 148 SUPERFAMILY SSF52242 3 134 1.15E-32 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Y11_31011 0e3c3b49a087371c0eaf13a08a4334fa 224 SMART SM00912 66 181 4.1E-28 T 13-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal Y11_31011 0e3c3b49a087371c0eaf13a08a4334fa 224 Gene3D G3DSA:2.160.20.10 59 211 9.8E-45 T 13-10-2018 IPR012334 Pectin lyase fold Y11_31011 0e3c3b49a087371c0eaf13a08a4334fa 224 Pfam PF05860 haemagglutination activity domain 68 178 3.9E-23 T 13-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal Y11_31011 0e3c3b49a087371c0eaf13a08a4334fa 224 SUPERFAMILY SSF51126 60 200 5.34E-29 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor Y11_31011 0e3c3b49a087371c0eaf13a08a4334fa 224 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 84 176 2.3E-18 T 13-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal Y11_20381 04717a5f0d3b2fcdceaee9fa494e54f4 430 Gene3D G3DSA:1.10.3430.10 25 409 2.0E-146 T 13-10-2018 IPR029020 Ammonium/urea transporter Y11_20381 04717a5f0d3b2fcdceaee9fa494e54f4 430 SUPERFAMILY SSF111352 29 409 1.83E-128 T 13-10-2018 Y11_20381 04717a5f0d3b2fcdceaee9fa494e54f4 430 ProSitePatterns PS01219 Ammonium transporters signature. 184 209 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Y11_20381 04717a5f0d3b2fcdceaee9fa494e54f4 430 Pfam PF00909 Ammonium Transporter Family 35 428 1.2E-127 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Y11_20381 04717a5f0d3b2fcdceaee9fa494e54f4 430 TIGRFAM TIGR00836 amt: ammonium transporter 33 428 2.4E-137 T 13-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 Y11_20381 04717a5f0d3b2fcdceaee9fa494e54f4 430 PRINTS PR00342 Rhesus blood group protein signature 309 327 7.3E-5 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Y11_20381 04717a5f0d3b2fcdceaee9fa494e54f4 430 PRINTS PR00342 Rhesus blood group protein signature 223 241 7.3E-5 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Y11_20381 04717a5f0d3b2fcdceaee9fa494e54f4 430 PRINTS PR00342 Rhesus blood group protein signature 128 144 7.3E-5 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Y11_20381 04717a5f0d3b2fcdceaee9fa494e54f4 430 PRINTS PR00342 Rhesus blood group protein signature 254 276 7.3E-5 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Y11_10421 5608bcd993e7147219a815ec4e2e5510 221 Gene3D G3DSA:3.20.20.70 1 219 3.2E-75 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_10421 5608bcd993e7147219a815ec4e2e5510 221 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 1.1E-79 T 13-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Y11_10421 5608bcd993e7147219a815ec4e2e5510 221 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 206 4.0E-42 T 13-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Y11_10421 5608bcd993e7147219a815ec4e2e5510 221 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Y11_10421 5608bcd993e7147219a815ec4e2e5510 221 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Y11_10421 5608bcd993e7147219a815ec4e2e5510 221 SUPERFAMILY SSF51569 1 216 5.13E-62 T 13-10-2018 Y11_40351 005fbd81717a8bb17876ef6e20ceedb2 161 Gene3D G3DSA:1.20.81.30 53 161 3.1E-26 T 13-10-2018 Y11_40351 005fbd81717a8bb17876ef6e20ceedb2 161 Pfam PF00482 Type II secretion system (T2SS), protein F 69 160 2.3E-20 T 13-10-2018 IPR018076 Type II secretion system F domain Y11_19341 c9980a06935f906d47056aa4c63595cb 69 SMART SM00357 5 69 4.3E-33 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Y11_19341 c9980a06935f906d47056aa4c63595cb 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 4.7E-33 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_19341 c9980a06935f906d47056aa4c63595cb 69 PIRSF PIRSF002599 1 69 1.2E-26 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 Y11_19341 c9980a06935f906d47056aa4c63595cb 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 13-10-2018 IPR019844 Cold-shock conserved site Y11_19341 c9980a06935f906d47056aa4c63595cb 69 Gene3D G3DSA:2.40.50.140 1 67 1.3E-31 T 13-10-2018 Y11_19341 c9980a06935f906d47056aa4c63595cb 69 SUPERFAMILY SSF50249 3 68 1.35E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_19341 c9980a06935f906d47056aa4c63595cb 69 PRINTS PR00050 Cold shock protein signature 42 60 2.0E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_19341 c9980a06935f906d47056aa4c63595cb 69 PRINTS PR00050 Cold shock protein signature 6 21 2.0E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_19341 c9980a06935f906d47056aa4c63595cb 69 PRINTS PR00050 Cold shock protein signature 27 36 2.0E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_03271 497b007ff20a1163cfdc400b8a56be0f 326 Pfam PF02378 Phosphotransferase system, EIIC 1 260 7.7E-15 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Y11_03271 497b007ff20a1163cfdc400b8a56be0f 326 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 1 316 1.5E-133 T 13-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 Y11_16551 3ef6a28f7eb4a9a3a862eb6a95158b7f 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 148 3.2E-23 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Y11_16551 3ef6a28f7eb4a9a3a862eb6a95158b7f 355 SUPERFAMILY SSF54211 167 251 1.77E-30 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_16551 3ef6a28f7eb4a9a3a862eb6a95158b7f 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 2.3E-64 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Y11_16551 3ef6a28f7eb4a9a3a862eb6a95158b7f 355 Gene3D G3DSA:3.30.230.40 163 254 4.4E-35 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Y11_16551 3ef6a28f7eb4a9a3a862eb6a95158b7f 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 36.409 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Y11_16551 3ef6a28f7eb4a9a3a862eb6a95158b7f 355 SUPERFAMILY SSF54211 252 342 2.28E-31 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_16551 3ef6a28f7eb4a9a3a862eb6a95158b7f 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Y11_16551 3ef6a28f7eb4a9a3a862eb6a95158b7f 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 50.811 T 13-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 Y11_16551 3ef6a28f7eb4a9a3a862eb6a95158b7f 355 SUPERFAMILY SSF56784 1 156 1.33E-36 T 13-10-2018 IPR036412 HAD-like superfamily Y11_16551 3ef6a28f7eb4a9a3a862eb6a95158b7f 355 Pfam PF08645 Polynucleotide kinase 3 phosphatase 5 130 6.3E-5 T 13-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 Y11_16551 3ef6a28f7eb4a9a3a862eb6a95158b7f 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 2.5E-43 T 13-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 Y11_16551 3ef6a28f7eb4a9a3a862eb6a95158b7f 355 Gene3D G3DSA:3.40.50.1000 1 162 3.4E-43 T 13-10-2018 IPR023214 HAD superfamily Y11_16551 3ef6a28f7eb4a9a3a862eb6a95158b7f 355 Gene3D G3DSA:3.30.230.40 255 355 1.7E-35 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Y11_16551 3ef6a28f7eb4a9a3a862eb6a95158b7f 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 5.3E-77 T 13-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 Y11_16551 3ef6a28f7eb4a9a3a862eb6a95158b7f 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Y11_19151 d92d2a41c20855b030c29f6b73e4803d 241 Pfam PF00005 ABC transporter 18 165 1.7E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_19151 d92d2a41c20855b030c29f6b73e4803d 241 Gene3D G3DSA:3.40.50.300 1 241 1.0E-75 T 13-10-2018 Y11_19151 d92d2a41c20855b030c29f6b73e4803d 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_19151 d92d2a41c20855b030c29f6b73e4803d 241 SMART SM00382 26 213 4.7E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_19151 d92d2a41c20855b030c29f6b73e4803d 241 SUPERFAMILY SSF52540 1 235 6.46E-77 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_19151 d92d2a41c20855b030c29f6b73e4803d 241 PIRSF PIRSF039085 1 241 9.3E-105 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Y11_21771 022b5113db18565ad0cb7d1f623f75cf 257 Pfam PF03591 AzlC protein 27 167 5.2E-39 T 13-10-2018 IPR011606 Branched-chain amino acid transport, permease Y11_22011 e3ac0e3486721d84ea8b666058f0b306 238 Gene3D G3DSA:3.40.50.2300 1 126 7.6E-32 T 13-10-2018 Y11_22011 e3ac0e3486721d84ea8b666058f0b306 238 Pfam PF00072 Response regulator receiver domain 4 111 9.3E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_22011 e3ac0e3486721d84ea8b666058f0b306 238 SUPERFAMILY SSF52172 1 127 2.99E-32 T 13-10-2018 IPR011006 CheY-like superfamily Y11_22011 e3ac0e3486721d84ea8b666058f0b306 238 SMART SM00448 2 112 2.4E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_22011 e3ac0e3486721d84ea8b666058f0b306 238 SMART SM00850 142 236 6.6E-24 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Y11_22011 e3ac0e3486721d84ea8b666058f0b306 238 Gene3D G3DSA:2.40.50.1020 132 237 2.3E-11 T 13-10-2018 Y11_22011 e3ac0e3486721d84ea8b666058f0b306 238 Pfam PF04397 LytTr DNA-binding domain 143 235 3.2E-24 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Y11_20651 9425c846385f9e483649812f47361ae2 295 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 13-10-2018 IPR030470 UbiA prenyltransferase conserved site Y11_20651 9425c846385f9e483649812f47361ae2 295 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 18.255 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Y11_20651 9425c846385f9e483649812f47361ae2 295 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 281 6.0E-92 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Y11_20651 9425c846385f9e483649812f47361ae2 295 Gene3D G3DSA:1.10.357.140 13 168 3.5E-19 T 13-10-2018 Y11_20651 9425c846385f9e483649812f47361ae2 295 Pfam PF01040 UbiA prenyltransferase family 18 266 9.3E-61 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Y11_37951 1ca7b2b53dbc513366c2251bf5655fee 330 Pfam PF00248 Aldo/keto reductase family 16 308 1.3E-78 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain Y11_37951 1ca7b2b53dbc513366c2251bf5655fee 330 SUPERFAMILY SSF51430 1 311 1.44E-104 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Y11_37951 1ca7b2b53dbc513366c2251bf5655fee 330 Gene3D G3DSA:3.20.20.100 1 328 2.1E-121 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Y11_05551 315b036241540bbdb039afad759a27a6 419 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 10 419 4.9E-212 T 13-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 Y11_05551 315b036241540bbdb039afad759a27a6 419 Pfam PF02687 FtsX-like permease family 307 412 1.9E-11 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Y11_05551 315b036241540bbdb039afad759a27a6 419 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 9 418 2.7E-157 T 13-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 Y11_05551 315b036241540bbdb039afad759a27a6 419 Pfam PF12704 MacB-like periplasmic core domain 32 243 6.5E-15 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Y11_18991 b20c6474ea4de7112db59d37b14fa168 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 230 1.1E-20 T 13-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 Y11_18991 b20c6474ea4de7112db59d37b14fa168 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 9.8E-137 T 13-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 Y11_18991 b20c6474ea4de7112db59d37b14fa168 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 13-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 Y11_18991 b20c6474ea4de7112db59d37b14fa168 266 SUPERFAMILY SSF100950 1 264 1.88E-104 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_18991 b20c6474ea4de7112db59d37b14fa168 266 Gene3D G3DSA:3.40.50.1360 1 266 1.4E-116 T 13-10-2018 Y11_18991 b20c6474ea4de7112db59d37b14fa168 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.663 T 13-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 Y11_43071 b717a032496c8f982da61f147383dc85 531 Gene3D G3DSA:3.50.50.60 435 530 2.7E-13 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_43071 b717a032496c8f982da61f147383dc85 531 Gene3D G3DSA:3.50.50.60 5 164 2.5E-16 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_43071 b717a032496c8f982da61f147383dc85 531 SUPERFAMILY SSF51905 6 528 1.4E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_43071 b717a032496c8f982da61f147383dc85 531 SUPERFAMILY SSF54373 398 472 9.02E-7 T 13-10-2018 Y11_43071 b717a032496c8f982da61f147383dc85 531 Pfam PF00890 FAD binding domain 8 40 7.2E-5 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_43071 b717a032496c8f982da61f147383dc85 531 Pfam PF05199 GMC oxidoreductase 433 528 1.7E-20 T 13-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Y11_24621 bb71f655714b488ede2cba431d522e72 372 SUPERFAMILY SSF52540 143 330 2.06E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_24621 bb71f655714b488ede2cba431d522e72 372 Gene3D G3DSA:3.40.50.300 146 364 2.2E-9 T 13-10-2018 Y11_24361 b26dd7a6188b494c7afb3d09dd4c3e74 91 Pfam PF04316 Anti-sigma-28 factor, FlgM 40 87 5.0E-7 T 13-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal Y11_24361 b26dd7a6188b494c7afb3d09dd4c3e74 91 SUPERFAMILY SSF101498 35 89 3.53E-8 T 13-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily Y11_24361 b26dd7a6188b494c7afb3d09dd4c3e74 91 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 14 90 5.6E-13 T 13-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 Y11_19831 a37a46d445f64c0cc5bfde31a1af21a9 159 SUPERFAMILY SSF55826 2 155 1.57E-44 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Y11_19831 a37a46d445f64c0cc5bfde31a1af21a9 159 Gene3D G3DSA:3.90.960.10 1 159 1.1E-62 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Y11_19831 a37a46d445f64c0cc5bfde31a1af21a9 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 9.0E-55 T 13-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Y11_19831 a37a46d445f64c0cc5bfde31a1af21a9 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 146 5.8E-24 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Y11_19831 a37a46d445f64c0cc5bfde31a1af21a9 159 PIRSF PIRSF006181 1 159 2.2E-55 T 13-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Y11_27191 9342aa30bc20212148f6c4e99c8eb282 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 150 4.0E-68 T 13-10-2018 Y11_27191 9342aa30bc20212148f6c4e99c8eb282 150 Pfam PF01220 Dehydroquinase class II 7 142 2.6E-61 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Y11_27191 9342aa30bc20212148f6c4e99c8eb282 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 7.8E-62 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Y11_27191 9342aa30bc20212148f6c4e99c8eb282 150 SUPERFAMILY SSF52304 6 148 8.5E-62 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Y11_27191 9342aa30bc20212148f6c4e99c8eb282 150 PIRSF PIRSF001399 3 149 5.4E-59 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Y11_27191 9342aa30bc20212148f6c4e99c8eb282 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 13-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Y11_27191 9342aa30bc20212148f6c4e99c8eb282 150 Gene3D G3DSA:3.40.50.9100 1 150 1.7E-68 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Y11_27191 9342aa30bc20212148f6c4e99c8eb282 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 74.735 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Y11_01921 315f7e6ab6adf8b5092bd7a2a53fecc5 497 SUPERFAMILY SSF51120 284 434 2.62E-22 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_01921 315f7e6ab6adf8b5092bd7a2a53fecc5 497 Gene3D G3DSA:2.150.10.10 307 464 1.0E-27 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_01921 315f7e6ab6adf8b5092bd7a2a53fecc5 497 PRINTS PR00313 NodO calcium binding signature 364 373 1.1E-9 T 13-10-2018 Y11_01921 315f7e6ab6adf8b5092bd7a2a53fecc5 497 PRINTS PR00313 NodO calcium binding signature 325 336 1.1E-9 T 13-10-2018 Y11_01921 315f7e6ab6adf8b5092bd7a2a53fecc5 497 PRINTS PR00313 NodO calcium binding signature 337 345 1.1E-9 T 13-10-2018 Y11_01921 315f7e6ab6adf8b5092bd7a2a53fecc5 497 PRINTS PR00313 NodO calcium binding signature 346 354 1.1E-9 T 13-10-2018 Y11_01921 315f7e6ab6adf8b5092bd7a2a53fecc5 497 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 333 351 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Y11_27721 8d7f2a6253e5a335c5e599a382254b95 403 PRINTS PR00181 Maltose binding protein signature 43 61 9.0E-90 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Y11_27721 8d7f2a6253e5a335c5e599a382254b95 403 PRINTS PR00181 Maltose binding protein signature 158 177 9.0E-90 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Y11_27721 8d7f2a6253e5a335c5e599a382254b95 403 PRINTS PR00181 Maltose binding protein signature 137 156 9.0E-90 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Y11_27721 8d7f2a6253e5a335c5e599a382254b95 403 PRINTS PR00181 Maltose binding protein signature 240 259 9.0E-90 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Y11_27721 8d7f2a6253e5a335c5e599a382254b95 403 PRINTS PR00181 Maltose binding protein signature 77 95 9.0E-90 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Y11_27721 8d7f2a6253e5a335c5e599a382254b95 403 PRINTS PR00181 Maltose binding protein signature 306 327 9.0E-90 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Y11_27721 8d7f2a6253e5a335c5e599a382254b95 403 PRINTS PR00181 Maltose binding protein signature 364 383 9.0E-90 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Y11_27721 8d7f2a6253e5a335c5e599a382254b95 403 PRINTS PR00181 Maltose binding protein signature 178 197 9.0E-90 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Y11_27721 8d7f2a6253e5a335c5e599a382254b95 403 Gene3D G3DSA:3.40.190.10 145 395 1.3E-145 T 13-10-2018 Y11_27721 8d7f2a6253e5a335c5e599a382254b95 403 Pfam PF13416 Bacterial extracellular solute-binding protein 57 350 2.3E-40 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein Y11_27721 8d7f2a6253e5a335c5e599a382254b95 403 SUPERFAMILY SSF53850 36 401 2.42E-92 T 13-10-2018 Y11_27721 8d7f2a6253e5a335c5e599a382254b95 403 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 13-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 Y11_27721 8d7f2a6253e5a335c5e599a382254b95 403 Gene3D G3DSA:3.40.190.10 55 364 1.3E-145 T 13-10-2018 Y11_14441 cc455c5d1ff1eba6cee4cf1af4260bfe 137 Pfam PF00460 Flagella basal body rod protein 9 39 3.1E-12 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Y11_14441 cc455c5d1ff1eba6cee4cf1af4260bfe 137 PIRSF PIRSF002889 1 137 7.8E-42 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Y11_14441 cc455c5d1ff1eba6cee4cf1af4260bfe 137 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 1.4E-42 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Y11_14441 cc455c5d1ff1eba6cee4cf1af4260bfe 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Y11_02381 c90b2f2ae79f3f5a385c498eab9e6d4a 438 Gene3D G3DSA:1.20.1250.20 224 416 1.7E-27 T 13-10-2018 Y11_02381 c90b2f2ae79f3f5a385c498eab9e6d4a 438 SUPERFAMILY SSF103473 4 415 2.62E-84 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_02381 c90b2f2ae79f3f5a385c498eab9e6d4a 438 Pfam PF07690 Major Facilitator Superfamily 17 379 7.6E-55 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_02381 c90b2f2ae79f3f5a385c498eab9e6d4a 438 Gene3D G3DSA:1.20.1250.20 2 203 4.7E-47 T 13-10-2018 Y11_40451 38c70a31f1745efe7f4704b5ce6b7641 153 Pfam PF01478 Type IV leader peptidase family 7 113 3.2E-21 T 13-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Y11_40451 38c70a31f1745efe7f4704b5ce6b7641 153 Gene3D G3DSA:1.20.120.1220 2 148 1.3E-5 T 13-10-2018 Y11_40451 38c70a31f1745efe7f4704b5ce6b7641 153 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 72 82 6.6E-19 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Y11_40451 38c70a31f1745efe7f4704b5ce6b7641 153 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 83 94 6.6E-19 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Y11_40451 38c70a31f1745efe7f4704b5ce6b7641 153 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 15 32 6.6E-19 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Y11_40451 38c70a31f1745efe7f4704b5ce6b7641 153 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 95 110 6.6E-19 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Y11_02871 c1aef283e75178935176c8dee9b382b1 246 Gene3D G3DSA:3.40.50.10490 80 245 1.2E-30 T 13-10-2018 Y11_02871 c1aef283e75178935176c8dee9b382b1 246 Pfam PF01380 SIS domain 108 223 2.8E-16 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_02871 c1aef283e75178935176c8dee9b382b1 246 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 70 3.7E-15 T 13-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Y11_02871 c1aef283e75178935176c8dee9b382b1 246 Gene3D G3DSA:1.10.10.10 3 71 1.6E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_02871 c1aef283e75178935176c8dee9b382b1 246 SUPERFAMILY SSF46689 6 72 1.06E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_02871 c1aef283e75178935176c8dee9b382b1 246 SUPERFAMILY SSF53697 86 230 5.11E-31 T 13-10-2018 Y11_15461 a9c2d29c5c0bf4803c32b1ca062513c3 296 Gene3D G3DSA:1.10.1040.10 170 296 2.0E-33 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Y11_15461 a9c2d29c5c0bf4803c32b1ca062513c3 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 6 289 1.5E-42 T 13-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 Y11_15461 a9c2d29c5c0bf4803c32b1ca062513c3 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 170 289 1.1E-17 T 13-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain Y11_15461 a9c2d29c5c0bf4803c32b1ca062513c3 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 7 149 4.6E-25 T 13-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain Y11_15461 a9c2d29c5c0bf4803c32b1ca062513c3 296 Gene3D G3DSA:3.40.50.720 2 169 1.1E-49 T 13-10-2018 Y11_15461 a9c2d29c5c0bf4803c32b1ca062513c3 296 SUPERFAMILY SSF51735 6 173 8.02E-10 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_15461 a9c2d29c5c0bf4803c32b1ca062513c3 296 SUPERFAMILY SSF48179 170 289 5.1E-22 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Y11_10821 271ee21abe8e662ac7a96e961fbf7f20 211 Pfam PF03922 OmpW family 23 211 3.0E-65 T 13-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 Y11_10821 271ee21abe8e662ac7a96e961fbf7f20 211 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 203 211 - T 13-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 Y11_10821 271ee21abe8e662ac7a96e961fbf7f20 211 Gene3D G3DSA:2.40.160.20 22 211 1.3E-77 T 13-10-2018 Y11_10821 271ee21abe8e662ac7a96e961fbf7f20 211 SUPERFAMILY SSF56925 23 211 9.94E-28 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Y11_14001 45519eeece944df7d237d53ea779146d 240 PIRSF PIRSF000770 3 240 1.5E-40 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_14001 45519eeece944df7d237d53ea779146d 240 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 62.862 T 13-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Y11_14001 45519eeece944df7d237d53ea779146d 240 SUPERFAMILY SSF88659 90 156 4.14E-15 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Y11_14001 45519eeece944df7d237d53ea779146d 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_14001 45519eeece944df7d237d53ea779146d 240 Pfam PF04545 Sigma-70, region 4 185 234 2.7E-17 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Y11_14001 45519eeece944df7d237d53ea779146d 240 Gene3D G3DSA:1.10.1740.10 4 85 4.1E-27 T 13-10-2018 Y11_14001 45519eeece944df7d237d53ea779146d 240 Pfam PF04539 Sigma-70 region 3 97 160 9.9E-15 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Y11_14001 45519eeece944df7d237d53ea779146d 240 Gene3D G3DSA:1.20.140.160 87 239 9.5E-47 T 13-10-2018 Y11_14001 45519eeece944df7d237d53ea779146d 240 Pfam PF04542 Sigma-70 region 2 16 88 2.2E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Y11_14001 45519eeece944df7d237d53ea779146d 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_14001 45519eeece944df7d237d53ea779146d 240 SUPERFAMILY SSF88659 150 238 1.53E-21 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Y11_14001 45519eeece944df7d237d53ea779146d 240 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 8.9E-86 T 13-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Y11_14001 45519eeece944df7d237d53ea779146d 240 SUPERFAMILY SSF88946 5 88 1.88E-23 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Y11_14001 45519eeece944df7d237d53ea779146d 240 PRINTS PR00046 Major sigma-70 factor signature 221 232 1.6E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_14001 45519eeece944df7d237d53ea779146d 240 PRINTS PR00046 Major sigma-70 factor signature 43 56 1.6E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_14001 45519eeece944df7d237d53ea779146d 240 PRINTS PR00046 Major sigma-70 factor signature 67 75 1.6E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_14001 45519eeece944df7d237d53ea779146d 240 PRINTS PR00046 Major sigma-70 factor signature 189 201 1.6E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_14001 45519eeece944df7d237d53ea779146d 240 PRINTS PR00046 Major sigma-70 factor signature 206 221 1.6E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Y11_14001 45519eeece944df7d237d53ea779146d 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 1.3E-32 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Y11_32501 6dcc06bf0908136e27f1e18a5ed6ba02 189 PIRSF PIRSF001467 16 187 3.9E-29 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Y11_32501 6dcc06bf0908136e27f1e18a5ed6ba02 189 SUPERFAMILY SSF50891 26 188 1.13E-57 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily Y11_32501 6dcc06bf0908136e27f1e18a5ed6ba02 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 5.0E-11 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Y11_32501 6dcc06bf0908136e27f1e18a5ed6ba02 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 5.0E-11 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Y11_32501 6dcc06bf0908136e27f1e18a5ed6ba02 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 158 5.0E-11 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Y11_32501 6dcc06bf0908136e27f1e18a5ed6ba02 189 Gene3D G3DSA:2.40.100.10 24 189 1.2E-69 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily Y11_32501 6dcc06bf0908136e27f1e18a5ed6ba02 189 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 187 8.7E-48 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Y11_32501 6dcc06bf0908136e27f1e18a5ed6ba02 189 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Y11_17551 c10b48acae233f11b76c9bcd4c542725 335 PIRSF PIRSF029038 15 335 1.7E-153 T 13-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 Y11_17551 c10b48acae233f11b76c9bcd4c542725 335 Pfam PF05971 Protein of unknown function (DUF890) 25 322 2.9E-123 T 13-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 Y11_17551 c10b48acae233f11b76c9bcd4c542725 335 SUPERFAMILY SSF53335 63 321 8.52E-31 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_17551 c10b48acae233f11b76c9bcd4c542725 335 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 26 325 54.17 T 13-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 Y11_17551 c10b48acae233f11b76c9bcd4c542725 335 Gene3D G3DSA:3.40.50.150 60 322 4.1E-78 T 13-10-2018 Y11_08901 95d42f5b2637482f7752c5f5e155bf37 219 Pfam PF02308 MgtC family 10 138 2.6E-40 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Y11_08901 95d42f5b2637482f7752c5f5e155bf37 219 PRINTS PR01837 MgtC/SapB protein signature 65 87 1.7E-47 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Y11_08901 95d42f5b2637482f7752c5f5e155bf37 219 PRINTS PR01837 MgtC/SapB protein signature 92 116 1.7E-47 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Y11_08901 95d42f5b2637482f7752c5f5e155bf37 219 PRINTS PR01837 MgtC/SapB protein signature 12 31 1.7E-47 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Y11_08901 95d42f5b2637482f7752c5f5e155bf37 219 PRINTS PR01837 MgtC/SapB protein signature 31 49 1.7E-47 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Y11_23841 a470aee0f54bf6ade6a9137061c87a04 175 Pfam PF00857 Isochorismatase family 6 140 1.2E-27 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 Y11_23841 a470aee0f54bf6ade6a9137061c87a04 175 SUPERFAMILY SSF52499 4 155 6.28E-37 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Y11_23841 a470aee0f54bf6ade6a9137061c87a04 175 Gene3D G3DSA:3.40.50.850 2 155 2.0E-35 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Y11_32871 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32871 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32871 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Y11_32871 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32871 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32871 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32871 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 1 103 3.9E-38 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Y11_32871 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 13-10-2018 IPR027486 Ribosomal protein S10 domain Y11_32871 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.1E-35 T 13-10-2018 IPR027486 Ribosomal protein S10 domain Y11_32871 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 13-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_12411 70be8a081c7fad0c1ddfb1a6aee2d5a1 194 Gene3D G3DSA:3.40.630.30 10 191 2.7E-46 T 13-10-2018 Y11_12411 70be8a081c7fad0c1ddfb1a6aee2d5a1 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 6.1E-18 T 13-10-2018 IPR000182 GNAT domain Y11_12411 70be8a081c7fad0c1ddfb1a6aee2d5a1 194 SUPERFAMILY SSF55729 12 186 4.1E-42 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_30561 6a3f78031f65627e78105cd167d391ac 342 Gene3D G3DSA:3.40.50.850 1 184 3.6E-33 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Y11_30561 6a3f78031f65627e78105cd167d391ac 342 Pfam PF00857 Isochorismatase family 4 141 1.3E-20 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 Y11_30561 6a3f78031f65627e78105cd167d391ac 342 SUPERFAMILY SSF52499 2 180 2.88E-33 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Y11_37151 e108ba78e79ccce09d1e9d5fcfa09c6c 586 Pfam PF08479 POTRA domain, ShlB-type 73 147 1.4E-15 T 13-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type Y11_37151 e108ba78e79ccce09d1e9d5fcfa09c6c 586 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 367 545 6.8E-11 T 13-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal Y11_37151 e108ba78e79ccce09d1e9d5fcfa09c6c 586 Gene3D G3DSA:3.10.20.310 67 147 1.3E-12 T 13-10-2018 Y11_37151 e108ba78e79ccce09d1e9d5fcfa09c6c 586 Gene3D G3DSA:2.40.160.50 180 584 4.9E-51 T 13-10-2018 Y11_42411 6dacd2181a3d99219a174921de7d5914 447 Pfam PF02447 GntP family permease 4 445 2.5E-159 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Y11_42411 6dacd2181a3d99219a174921de7d5914 447 PIRSF PIRSF002746 1 447 8.5E-143 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Y11_42411 6dacd2181a3d99219a174921de7d5914 447 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 447 5.9E-172 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Y11_13751 5f33cdca530b1a5d51e5db82f35e161c 223 Pfam PF00860 Permease family 31 214 7.7E-41 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Y11_15151 65407a87e139afcf3b935d2f23ead257 176 SUPERFAMILY SSF49401 25 175 5.47E-27 T 13-10-2018 IPR008966 Adhesion domain superfamily Y11_15151 65407a87e139afcf3b935d2f23ead257 176 Pfam PF00419 Fimbrial protein 26 175 1.9E-12 T 13-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 Y11_15151 65407a87e139afcf3b935d2f23ead257 176 Gene3D G3DSA:2.60.40.1090 22 176 8.8E-27 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Y11_11011 68301db549028c22c04ccf63717b1bba 214 Pfam PF01914 MarC family integral membrane protein 10 210 2.3E-73 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Y11_11011 68301db549028c22c04ccf63717b1bba 214 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 7.6E-80 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Y11_32351 d343cb59527fa5cfcd919324071e29ff 332 Hamap MF_02021 Cell division protein DamX [damX]. 1 332 26.211 T 13-10-2018 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 Y11_32351 d343cb59527fa5cfcd919324071e29ff 332 Gene3D G3DSA:3.30.70.1070 231 331 7.9E-33 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Y11_32351 d343cb59527fa5cfcd919324071e29ff 332 Pfam PF05036 Sporulation related domain 248 321 1.8E-9 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Y11_34861 e41876ad626fcf11545026b6089f1b9c 150 SUPERFAMILY SSF55729 2 143 7.98E-15 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_34861 e41876ad626fcf11545026b6089f1b9c 150 Pfam PF13673 Acetyltransferase (GNAT) domain 38 143 5.2E-10 T 13-10-2018 IPR000182 GNAT domain Y11_34861 e41876ad626fcf11545026b6089f1b9c 150 Gene3D G3DSA:3.40.630.30 1 150 8.0E-31 T 13-10-2018 Y11_25601 203641f813113333da6c69e96b3a1502 286 Gene3D G3DSA:3.40.50.10490 100 279 1.1E-37 T 13-10-2018 Y11_25601 203641f813113333da6c69e96b3a1502 286 SUPERFAMILY SSF46689 1 78 2.69E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_25601 203641f813113333da6c69e96b3a1502 286 Pfam PF01380 SIS domain 132 260 9.9E-19 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_25601 203641f813113333da6c69e96b3a1502 286 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 8.0E-22 T 13-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Y11_25601 203641f813113333da6c69e96b3a1502 286 Gene3D G3DSA:1.10.10.10 1 76 1.6E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_25601 203641f813113333da6c69e96b3a1502 286 SUPERFAMILY SSF53697 110 274 3.44E-35 T 13-10-2018 Y11_10641 3073623ada29f73f0154569ab256827f 871 Gene3D G3DSA:3.40.50.140 1 169 2.1E-67 T 13-10-2018 Y11_10641 3073623ada29f73f0154569ab256827f 871 Gene3D G3DSA:2.20.25.10 814 871 2.4E-31 T 13-10-2018 Y11_10641 3073623ada29f73f0154569ab256827f 871 Gene3D G3DSA:2.70.20.10 219 479 4.4E-164 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Y11_10641 3073623ada29f73f0154569ab256827f 871 SUPERFAMILY SSF56712 3 615 2.75E-202 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Y11_10641 3073623ada29f73f0154569ab256827f 871 SMART SM00436 139 227 3.4E-48 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Y11_10641 3073623ada29f73f0154569ab256827f 871 Pfam PF08272 Topoisomerase I zinc-ribbon-like 764 799 2.9E-12 T 13-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 Y11_10641 3073623ada29f73f0154569ab256827f 871 Pfam PF08272 Topoisomerase I zinc-ribbon-like 830 869 3.3E-23 T 13-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 Y11_10641 3073623ada29f73f0154569ab256827f 871 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Y11_10641 3073623ada29f73f0154569ab256827f 871 Pfam PF01751 Toprim domain 5 148 7.9E-33 T 13-10-2018 IPR006171 TOPRIM domain Y11_10641 3073623ada29f73f0154569ab256827f 871 SUPERFAMILY SSF57783 815 870 5.95E-23 T 13-10-2018 Y11_10641 3073623ada29f73f0154569ab256827f 871 SUPERFAMILY SSF57783 751 813 3.57E-19 T 13-10-2018 Y11_10641 3073623ada29f73f0154569ab256827f 871 SMART SM00493 3 138 5.9E-34 T 13-10-2018 IPR006171 TOPRIM domain Y11_10641 3073623ada29f73f0154569ab256827f 871 Gene3D G3DSA:3.30.65.10 751 813 5.5E-32 T 13-10-2018 Y11_10641 3073623ada29f73f0154569ab256827f 871 Gene3D G3DSA:3.30.65.10 706 750 5.9E-6 T 13-10-2018 Y11_10641 3073623ada29f73f0154569ab256827f 871 SMART SM00437 278 533 8.8E-121 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Y11_10641 3073623ada29f73f0154569ab256827f 871 Gene3D G3DSA:1.10.460.10 171 577 4.4E-164 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Y11_10641 3073623ada29f73f0154569ab256827f 871 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 641 2.1E-256 T 13-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Y11_10641 3073623ada29f73f0154569ab256827f 871 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 738 54.95 T 13-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Y11_10641 3073623ada29f73f0154569ab256827f 871 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 7.6E-6 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Y11_10641 3073623ada29f73f0154569ab256827f 871 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 715 750 1.1E-11 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Y11_10641 3073623ada29f73f0154569ab256827f 871 Pfam PF01131 DNA topoisomerase 163 571 2.4E-127 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Y11_10641 3073623ada29f73f0154569ab256827f 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 6.1E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Y11_10641 3073623ada29f73f0154569ab256827f 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 6.1E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Y11_10641 3073623ada29f73f0154569ab256827f 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 6.1E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Y11_10641 3073623ada29f73f0154569ab256827f 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 6.1E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Y11_10641 3073623ada29f73f0154569ab256827f 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 6.1E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Y11_10641 3073623ada29f73f0154569ab256827f 871 Gene3D G3DSA:1.10.290.10 286 410 4.4E-164 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Y11_10641 3073623ada29f73f0154569ab256827f 871 SUPERFAMILY SSF57783 708 749 2.55E-7 T 13-10-2018 Y11_34331 deff0c70bc6d92f148c1f539561c6b06 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 5.5E-63 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_19561 162726affc5c49e62ac39191620e9f89 67 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 10 62 8.0E-6 T 13-10-2018 IPR009241 Toxin HigB-like Y11_24771 aad168a674a8d74566c0054c7c6c2e10 277 SUPERFAMILY SSF51430 5 267 4.98E-88 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Y11_24771 aad168a674a8d74566c0054c7c6c2e10 277 PRINTS PR00069 Aldo-keto reductase signature 123 140 1.2E-45 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Y11_24771 aad168a674a8d74566c0054c7c6c2e10 277 PRINTS PR00069 Aldo-keto reductase signature 91 109 1.2E-45 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Y11_24771 aad168a674a8d74566c0054c7c6c2e10 277 PRINTS PR00069 Aldo-keto reductase signature 157 186 1.2E-45 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Y11_24771 aad168a674a8d74566c0054c7c6c2e10 277 PRINTS PR00069 Aldo-keto reductase signature 196 220 1.2E-45 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Y11_24771 aad168a674a8d74566c0054c7c6c2e10 277 PRINTS PR00069 Aldo-keto reductase signature 37 61 1.2E-45 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Y11_24771 aad168a674a8d74566c0054c7c6c2e10 277 PIRSF PIRSF000097 1 271 1.8E-92 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Y11_24771 aad168a674a8d74566c0054c7c6c2e10 277 Gene3D G3DSA:3.20.20.100 1 275 4.3E-118 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Y11_24771 aad168a674a8d74566c0054c7c6c2e10 277 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Y11_24771 aad168a674a8d74566c0054c7c6c2e10 277 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Y11_24771 aad168a674a8d74566c0054c7c6c2e10 277 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Y11_24771 aad168a674a8d74566c0054c7c6c2e10 277 Pfam PF00248 Aldo/keto reductase family 18 192 1.1E-36 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain Y11_24771 aad168a674a8d74566c0054c7c6c2e10 277 Pfam PF00248 Aldo/keto reductase family 202 260 2.3E-9 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain Y11_11671 135ccef50fbf3c7f2871495018e70deb 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 13-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 Y11_11671 135ccef50fbf3c7f2871495018e70deb 114 SUPERFAMILY SSF55298 2 114 7.7E-26 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Y11_11671 135ccef50fbf3c7f2871495018e70deb 114 Pfam PF01042 Endoribonuclease L-PSP 4 113 4.0E-25 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Y11_11671 135ccef50fbf3c7f2871495018e70deb 114 Gene3D G3DSA:3.30.1330.40 1 114 1.0E-33 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Y11_30891 3ea8c81e9b1edd76af174970bf19af7b 306 Gene3D G3DSA:3.30.420.40 5 295 1.7E-80 T 13-10-2018 Y11_30891 3ea8c81e9b1edd76af174970bf19af7b 306 ProSitePatterns PS01125 ROK family signature. 131 158 - T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Y11_30891 3ea8c81e9b1edd76af174970bf19af7b 306 SUPERFAMILY SSF53067 1 304 1.03E-61 T 13-10-2018 Y11_30891 3ea8c81e9b1edd76af174970bf19af7b 306 Pfam PF00480 ROK family 4 297 3.4E-76 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Y11_30891 3ea8c81e9b1edd76af174970bf19af7b 306 Gene3D G3DSA:3.30.420.40 120 288 1.7E-80 T 13-10-2018 Y11_34691 e6ebc9abbe26f020c6a00ae805d94609 260 Hamap MF_00901 3'-5' ssDNA/RNA exonuclease TatD [tatD]. 1 260 64.32 T 13-10-2018 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 Y11_34691 e6ebc9abbe26f020c6a00ae805d94609 260 PIRSF PIRSF005902 1 260 1.6E-70 T 13-10-2018 IPR001130 TatD family GO:0016788 Y11_34691 e6ebc9abbe26f020c6a00ae805d94609 260 SUPERFAMILY SSF51556 1 259 1.36E-78 T 13-10-2018 IPR032466 Metal-dependent hydrolase Y11_34691 e6ebc9abbe26f020c6a00ae805d94609 260 Pfam PF01026 TatD related DNase 2 257 1.8E-65 T 13-10-2018 IPR001130 TatD family GO:0016788 Y11_34691 e6ebc9abbe26f020c6a00ae805d94609 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Y11_34691 e6ebc9abbe26f020c6a00ae805d94609 260 Gene3D G3DSA:3.20.20.140 1 260 2.1E-94 T 13-10-2018 Y11_40711 9f8648830552af0bedd07748f2989765 209 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 22 45 1.5E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Y11_40711 9f8648830552af0bedd07748f2989765 209 PIRSF PIRSF004525 14 209 7.8E-67 T 13-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted Y11_40711 9f8648830552af0bedd07748f2989765 209 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 23 43 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Y11_40711 9f8648830552af0bedd07748f2989765 209 Pfam PF07963 Prokaryotic N-terminal methylation motif 22 44 1.6E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Y11_12701 a6ed37de14ecc28300b2417cf1e757ee 160 SUPERFAMILY SSF53955 7 160 1.94E-50 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Y11_12701 a6ed37de14ecc28300b2417cf1e757ee 160 Gene3D G3DSA:1.10.530.40 1 160 3.0E-47 T 13-10-2018 Y11_12701 a6ed37de14ecc28300b2417cf1e757ee 160 Pfam PF00959 Phage lysozyme 46 150 1.6E-23 T 13-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 Y11_09131 3b02721b449532de24e8e62a4041d2ca 251 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.1E-11 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Y11_09131 3b02721b449532de24e8e62a4041d2ca 251 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.1E-11 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Y11_09131 3b02721b449532de24e8e62a4041d2ca 251 SUPERFAMILY SSF51206 23 162 2.88E-31 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Y11_09131 3b02721b449532de24e8e62a4041d2ca 251 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 4.0E-15 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Y11_09131 3b02721b449532de24e8e62a4041d2ca 251 Pfam PF13545 Crp-like helix-turn-helix domain 168 242 1.5E-16 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Y11_09131 3b02721b449532de24e8e62a4041d2ca 251 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 13-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 Y11_09131 3b02721b449532de24e8e62a4041d2ca 251 SUPERFAMILY SSF46785 165 245 3.21E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_09131 3b02721b449532de24e8e62a4041d2ca 251 SMART SM00419 187 235 4.6E-13 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Y11_09131 3b02721b449532de24e8e62a4041d2ca 251 Gene3D G3DSA:1.10.10.10 165 247 2.4E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_09131 3b02721b449532de24e8e62a4041d2ca 251 SMART SM00100 30 151 9.7E-22 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Y11_09131 3b02721b449532de24e8e62a4041d2ca 251 Gene3D G3DSA:2.60.120.10 43 164 4.1E-48 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_22091 24475c187820904a37c91239f4c86d15 263 Pfam PF01578 Cytochrome C assembly protein 37 261 3.9E-42 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Y11_10941 b00fca2e39cb0d9005117bfe0f136e0b 107 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 5 107 2.0E-53 T 13-10-2018 IPR007376 dsDNA mimic, putative Y11_10941 b00fca2e39cb0d9005117bfe0f136e0b 107 PIRSF PIRSF004916 1 107 2.2E-57 T 13-10-2018 IPR007376 dsDNA mimic, putative Y11_10941 b00fca2e39cb0d9005117bfe0f136e0b 107 SUPERFAMILY SSF102816 1 107 3.92E-52 T 13-10-2018 IPR036763 Putative dsDNA mimic superfamily Y11_10941 b00fca2e39cb0d9005117bfe0f136e0b 107 Pfam PF04269 Protein of unknown function, DUF440 6 107 3.0E-47 T 13-10-2018 IPR007376 dsDNA mimic, putative Y11_10941 b00fca2e39cb0d9005117bfe0f136e0b 107 Hamap MF_00680 UPF0263 protein YciU [yciU]. 3 107 34.961 T 13-10-2018 IPR007376 dsDNA mimic, putative Y11_10941 b00fca2e39cb0d9005117bfe0f136e0b 107 Gene3D G3DSA:3.10.450.140 7 107 5.3E-43 T 13-10-2018 IPR036763 Putative dsDNA mimic superfamily Y11_28131 bf11ec3b283ee22fa00dd359147bf9a8 294 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 6.9E-105 T 13-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 Y11_28131 bf11ec3b283ee22fa00dd359147bf9a8 294 SUPERFAMILY SSF51730 22 293 2.55E-96 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like Y11_28131 bf11ec3b283ee22fa00dd359147bf9a8 294 Pfam PF02219 Methylenetetrahydrofolate reductase 16 291 7.3E-110 T 13-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Y11_28131 bf11ec3b283ee22fa00dd359147bf9a8 294 Gene3D G3DSA:3.20.20.220 1 294 5.2E-118 T 13-10-2018 Y11_37041 b49ea17c7e831cbf2f8ab7ea7fc0d3e7 92 Gene3D G3DSA:3.30.63.10 34 84 2.9E-7 T 13-10-2018 Y11_37041 b49ea17c7e831cbf2f8ab7ea7fc0d3e7 92 SUPERFAMILY SSF52540 1 82 6.01E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_37041 b49ea17c7e831cbf2f8ab7ea7fc0d3e7 92 Gene3D G3DSA:3.40.50.300 7 33 2.9E-7 T 13-10-2018 Y11_17041 cba13587573ebeb63e0cb9c03f449557 489 Pfam PF00361 Proton-conducting membrane transporter 143 427 6.9E-57 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17041 cba13587573ebeb63e0cb9c03f449557 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 165 186 4.1E-30 T 13-10-2018 Y11_17041 cba13587573ebeb63e0cb9c03f449557 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 248 274 4.1E-30 T 13-10-2018 Y11_17041 cba13587573ebeb63e0cb9c03f449557 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 4.1E-30 T 13-10-2018 Y11_17041 cba13587573ebeb63e0cb9c03f449557 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 119 139 4.1E-30 T 13-10-2018 Y11_17041 cba13587573ebeb63e0cb9c03f449557 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 226 247 4.1E-30 T 13-10-2018 Y11_17041 cba13587573ebeb63e0cb9c03f449557 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 317 329 4.1E-30 T 13-10-2018 Y11_17041 cba13587573ebeb63e0cb9c03f449557 489 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 80 129 6.5E-8 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_07631 1557335a8900bcf137e27609f44b3d0c 184 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 181 4.0E-90 T 13-10-2018 Y11_07631 1557335a8900bcf137e27609f44b3d0c 184 Pfam PF14002 YniB-like protein 15 179 1.3E-82 T 13-10-2018 IPR025229 YniB-like protein Y11_17811 0b3d17f4100e21036122831f51b66251 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 340 1.7E-39 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_17811 0b3d17f4100e21036122831f51b66251 358 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 42 351 1.1E-128 T 13-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC Y11_18071 eb4f31d37b9b2d20e939cbc001499453 81 SUPERFAMILY SSF54285 1 81 2.24E-22 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Y11_18071 eb4f31d37b9b2d20e939cbc001499453 81 Gene3D G3DSA:3.10.20.30 1 81 8.2E-27 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Y11_18071 eb4f31d37b9b2d20e939cbc001499453 81 Pfam PF02597 ThiS family 4 81 1.7E-20 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Y11_18071 eb4f31d37b9b2d20e939cbc001499453 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 1.5E-24 T 13-10-2018 Y11_04501 225810ba0a769be882fb1dd95d88d1d6 165 PIRSF PIRSF010252 1 158 3.4E-50 T 13-10-2018 IPR009809 Cell division protein ZapC Y11_04501 225810ba0a769be882fb1dd95d88d1d6 165 Pfam PF07126 Cell-division protein ZapC 1 148 1.1E-56 T 13-10-2018 IPR009809 Cell division protein ZapC Y11_04501 225810ba0a769be882fb1dd95d88d1d6 165 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 156 32.641 T 13-10-2018 IPR009809 Cell division protein ZapC Y11_22761 67f157501ab99fdb1f634a82aa4ae03f 208 SUPERFAMILY SSF53335 4 204 3.84E-47 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_22761 67f157501ab99fdb1f634a82aa4ae03f 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.777 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Y11_22761 67f157501ab99fdb1f634a82aa4ae03f 208 Gene3D G3DSA:3.40.50.150 1 207 1.4E-78 T 13-10-2018 Y11_22761 67f157501ab99fdb1f634a82aa4ae03f 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 1 207 1.6E-89 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Y11_22761 67f157501ab99fdb1f634a82aa4ae03f 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 206 2.0E-76 T 13-10-2018 Y11_22761 67f157501ab99fdb1f634a82aa4ae03f 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Y11_36621 96452c5af261fbd6c7283075d9f5a744 158 Gene3D G3DSA:3.10.50.30 76 158 7.2E-32 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Y11_36621 96452c5af261fbd6c7283075d9f5a744 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 2.9E-59 T 13-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 Y11_36621 96452c5af261fbd6c7283075d9f5a744 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 4.0E-32 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Y11_36621 96452c5af261fbd6c7283075d9f5a744 158 PIRSF PIRSF006092 1 158 3.8E-55 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Y11_36621 96452c5af261fbd6c7283075d9f5a744 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Y11_36621 96452c5af261fbd6c7283075d9f5a744 158 SUPERFAMILY SSF46557 3 78 1.96E-29 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Y11_36621 96452c5af261fbd6c7283075d9f5a744 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.258 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Y11_36621 96452c5af261fbd6c7283075d9f5a744 158 Gene3D G3DSA:1.10.287.180 1 75 2.4E-33 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Y11_36621 96452c5af261fbd6c7283075d9f5a744 158 SUPERFAMILY SSF54534 81 157 4.45E-23 T 13-10-2018 Y11_36621 96452c5af261fbd6c7283075d9f5a744 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Y11_36621 96452c5af261fbd6c7283075d9f5a744 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 5.2E-27 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Y11_43381 cb8d4434042033abe921c0f0f158e03e 728 SUPERFAMILY SSF161098 416 495 1.96E-6 T 13-10-2018 IPR035906 MetI-like superfamily Y11_43381 cb8d4434042033abe921c0f0f158e03e 728 SUPERFAMILY SSF161098 510 711 6.41E-21 T 13-10-2018 IPR035906 MetI-like superfamily Y11_43381 cb8d4434042033abe921c0f0f158e03e 728 SUPERFAMILY SSF82171 168 373 4.32E-11 T 13-10-2018 Y11_43381 cb8d4434042033abe921c0f0f158e03e 728 Gene3D G3DSA:1.10.3720.10 510 721 2.8E-20 T 13-10-2018 IPR035906 MetI-like superfamily Y11_43381 cb8d4434042033abe921c0f0f158e03e 728 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 446 715 6.3E-11 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_37841 ca5610ec58cd0eea5bc3d424590de206 469 Gene3D G3DSA:2.115.10.20 3 352 4.1E-111 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Y11_37841 ca5610ec58cd0eea5bc3d424590de206 469 SMART SM00640 31 432 3.5E-134 T 13-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 Y11_37841 ca5610ec58cd0eea5bc3d424590de206 469 SUPERFAMILY SSF75005 21 336 6.42E-109 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Y11_37841 ca5610ec58cd0eea5bc3d424590de206 469 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 31 44 - T 13-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 Y11_37841 ca5610ec58cd0eea5bc3d424590de206 469 SUPERFAMILY SSF49899 336 462 1.03E-16 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Y11_37841 ca5610ec58cd0eea5bc3d424590de206 469 Gene3D G3DSA:2.60.120.560 401 460 3.3E-8 T 13-10-2018 Y11_37841 ca5610ec58cd0eea5bc3d424590de206 469 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 16 442 2.2E-156 T 13-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 Y11_37841 ca5610ec58cd0eea5bc3d424590de206 469 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 31 336 4.7E-102 T 13-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal Y11_37841 ca5610ec58cd0eea5bc3d424590de206 469 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 414 446 5.5E-7 T 13-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal Y11_16951 932bf121934da7c426f5745c6cd74fe9 298 Gene3D G3DSA:3.40.140.10 184 298 4.9E-26 T 13-10-2018 Y11_16951 932bf121934da7c426f5745c6cd74fe9 298 PIRSF PIRSF006334 14 298 2.3E-106 T 13-10-2018 Y11_16951 932bf121934da7c426f5745c6cd74fe9 298 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 31 289 3.0E-84 T 13-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 Y11_16951 932bf121934da7c426f5745c6cd74fe9 298 Gene3D G3DSA:3.40.140.10 29 179 5.0E-42 T 13-10-2018 Y11_16951 932bf121934da7c426f5745c6cd74fe9 298 Hamap MF_01558 Cytidine deaminase [cdd]. 1 297 48.324 T 13-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 Y11_16951 932bf121934da7c426f5745c6cd74fe9 298 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 282 9.8E-42 T 13-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 Y11_16951 932bf121934da7c426f5745c6cd74fe9 298 SUPERFAMILY SSF53927 1 147 4.18E-40 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Y11_16951 932bf121934da7c426f5745c6cd74fe9 298 SUPERFAMILY SSF53927 154 296 2.69E-37 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Y11_16951 932bf121934da7c426f5745c6cd74fe9 298 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 64 140 1.0E-11 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Y11_16951 932bf121934da7c426f5745c6cd74fe9 298 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Y11_15671 ce48ad6e239e5ba2c07b15e72b295fac 178 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 22 145 2.5E-31 T 13-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN Y11_15671 ce48ad6e239e5ba2c07b15e72b295fac 178 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 13 144 1.4E-39 T 13-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN Y11_15671 ce48ad6e239e5ba2c07b15e72b295fac 178 Gene3D G3DSA:2.60.40.4150 29 178 1.0E-27 T 13-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily Y11_22591 811fe69577e47e4dd634b4d27ef086c5 203 SUPERFAMILY SSF52833 39 177 2.21E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_22591 811fe69577e47e4dd634b4d27ef086c5 203 Gene3D G3DSA:3.40.30.10 14 187 4.2E-20 T 13-10-2018 Y11_42641 a6e0ca35e314f9063ffa479d57976a5f 385 PIRSF PIRSF004925 1 385 8.2E-109 T 13-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter Y11_42641 a6e0ca35e314f9063ffa479d57976a5f 385 Pfam PF12832 MFS_1 like family 8 360 8.8E-48 T 13-10-2018 IPR024989 Major facilitator superfamily associated domain Y11_42641 a6e0ca35e314f9063ffa479d57976a5f 385 SUPERFAMILY SSF103473 7 372 3.79E-37 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_42641 a6e0ca35e314f9063ffa479d57976a5f 385 Gene3D G3DSA:1.20.1250.20 186 376 6.0E-36 T 13-10-2018 Y11_42641 a6e0ca35e314f9063ffa479d57976a5f 385 Gene3D G3DSA:1.20.1250.20 4 182 6.7E-17 T 13-10-2018 Y11_34511 473579892e12d36cc646ec602df53768 317 Pfam PF03466 LysR substrate binding domain 87 288 4.2E-41 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_34511 473579892e12d36cc646ec602df53768 317 Gene3D G3DSA:1.10.10.10 1 89 9.9E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_34511 473579892e12d36cc646ec602df53768 317 SUPERFAMILY SSF53850 88 290 9.46E-38 T 13-10-2018 Y11_34511 473579892e12d36cc646ec602df53768 317 Gene3D G3DSA:3.40.190.10 90 286 1.0E-71 T 13-10-2018 Y11_34511 473579892e12d36cc646ec602df53768 317 SUPERFAMILY SSF46785 1 109 6.53E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_34511 473579892e12d36cc646ec602df53768 317 Gene3D G3DSA:3.40.190.10 160 263 1.0E-71 T 13-10-2018 Y11_34511 473579892e12d36cc646ec602df53768 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_34511 473579892e12d36cc646ec602df53768 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_34511 473579892e12d36cc646ec602df53768 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_34511 473579892e12d36cc646ec602df53768 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.2E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_18101 9b2610369cb113d37017d0ff3764bb66 307 Gene3D G3DSA:3.40.50.12300 9 301 1.5E-73 T 13-10-2018 IPR038136 Gluconeogenesis factor superfamily Y11_18101 9b2610369cb113d37017d0ff3764bb66 307 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 260 8.2E-92 T 13-10-2018 IPR010119 Gluconeogenesis factor Y11_18101 9b2610369cb113d37017d0ff3764bb66 307 SUPERFAMILY SSF142338 11 294 8.37E-79 T 13-10-2018 Y11_18101 9b2610369cb113d37017d0ff3764bb66 307 Hamap MF_00973 Gluconeogenesis factor. 8 300 31.205 T 13-10-2018 IPR010119 Gluconeogenesis factor Y11_18101 9b2610369cb113d37017d0ff3764bb66 307 Pfam PF01933 Uncharacterised protein family UPF0052 12 295 1.3E-71 T 13-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 Y11_26111 e207d696137ef00e7e175118f3ff8b3e 241 Gene3D G3DSA:3.40.50.300 61 241 1.5E-41 T 13-10-2018 Y11_26111 e207d696137ef00e7e175118f3ff8b3e 241 Pfam PF01695 IstB-like ATP binding protein 54 228 4.5E-56 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Y11_26111 e207d696137ef00e7e175118f3ff8b3e 241 PIRSF PIRSF003073 1 241 7.0E-73 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Y11_26111 e207d696137ef00e7e175118f3ff8b3e 241 SUPERFAMILY SSF52540 64 228 1.38E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_26111 e207d696137ef00e7e175118f3ff8b3e 241 SMART SM00382 97 229 2.1E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_10511 4b804c9672aaf1fcaa95bc61ef86dadf 86 Gene3D G3DSA:3.30.1660.10 19 86 3.5E-20 T 13-10-2018 IPR025543 Dodecin-like Y11_10511 4b804c9672aaf1fcaa95bc61ef86dadf 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 5.5E-20 T 13-10-2018 IPR010854 Domain of unknown function DUF1471 Y11_10511 4b804c9672aaf1fcaa95bc61ef86dadf 86 SUPERFAMILY SSF159871 3 86 5.23E-25 T 13-10-2018 IPR036275 YdgH-like superfamily Y11_25481 24e5e7b684b7bb30112ab1b27f102ab7 47 Pfam PF17399 Domain of unknown function (DUF5405) 1 39 3.8E-7 T 13-10-2018 IPR035404 Domain of unknown function DUF5405 Y11_21111 83fd5678c3ee9b9d907cfcf1272f6d26 713 Gene3D G3DSA:2.40.170.20 178 713 3.3E-122 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Y11_21111 83fd5678c3ee9b9d907cfcf1272f6d26 713 Gene3D G3DSA:2.170.130.10 48 177 3.0E-34 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Y11_21111 83fd5678c3ee9b9d907cfcf1272f6d26 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 168 3.0E-18 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Y11_21111 83fd5678c3ee9b9d907cfcf1272f6d26 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 713 1.2E-103 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 Y11_21111 83fd5678c3ee9b9d907cfcf1272f6d26 713 Pfam PF00593 TonB dependent receptor 241 711 1.9E-62 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Y11_21111 83fd5678c3ee9b9d907cfcf1272f6d26 713 SUPERFAMILY SSF56935 56 713 5.86E-126 T 13-10-2018 Y11_17561 7550040a5195ac47fb2be33168691315 215 Pfam PF01613 Flavin reductase like domain 28 168 1.8E-17 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Y11_17561 7550040a5195ac47fb2be33168691315 215 SMART SM00903 26 178 4.8E-15 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Y11_17561 7550040a5195ac47fb2be33168691315 215 Gene3D G3DSA:2.30.110.10 15 211 2.2E-55 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Y11_17561 7550040a5195ac47fb2be33168691315 215 SUPERFAMILY SSF50475 5 199 1.67E-46 T 13-10-2018 Y11_00521 c8b90e904efc34e8f4d1979f7a03394b 263 Pfam PF01548 Transposase 16 156 2.5E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_00521 c8b90e904efc34e8f4d1979f7a03394b 263 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 256 2.6E-6 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_37291 c8b90e904efc34e8f4d1979f7a03394b 263 Pfam PF01548 Transposase 16 156 2.5E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_37291 c8b90e904efc34e8f4d1979f7a03394b 263 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 256 2.6E-6 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_19971 dade79ac5f44f0b94ab5c5b624949450 292 Pfam PF00535 Glycosyl transferase family 2 5 105 1.3E-27 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Y11_19971 dade79ac5f44f0b94ab5c5b624949450 292 SUPERFAMILY SSF53448 4 221 1.27E-35 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_19971 dade79ac5f44f0b94ab5c5b624949450 292 Gene3D G3DSA:3.90.550.10 1 242 1.2E-34 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_16631 16793c426e975955348243bdb8def875 296 Gene3D G3DSA:3.90.550.10 1 296 5.6E-85 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_16631 16793c426e975955348243bdb8def875 296 SUPERFAMILY SSF53448 1 281 1.19E-59 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_16631 16793c426e975955348243bdb8def875 296 Pfam PF00483 Nucleotidyl transferase 5 272 4.1E-25 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Y11_16631 16793c426e975955348243bdb8def875 296 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 272 8.3E-115 T 13-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Y11_p0661 99fcb77b3f456ea67ee1a31a3aaebcb1 607 Gene3D G3DSA:3.30.1370.120 108 179 1.1E-16 T 13-10-2018 IPR038591 NolW-like superfamily Y11_p0661 99fcb77b3f456ea67ee1a31a3aaebcb1 607 Gene3D G3DSA:3.30.1370.120 182 281 2.6E-11 T 13-10-2018 IPR038591 NolW-like superfamily Y11_p0661 99fcb77b3f456ea67ee1a31a3aaebcb1 607 Gene3D G3DSA:3.55.50.30 22 107 5.7E-27 T 13-10-2018 Y11_p0661 99fcb77b3f456ea67ee1a31a3aaebcb1 607 Pfam PF03958 Bacterial type II/III secretion system short domain 112 171 4.2E-7 T 13-10-2018 IPR005644 NolW-like Y11_p0661 99fcb77b3f456ea67ee1a31a3aaebcb1 607 Pfam PF03958 Bacterial type II/III secretion system short domain 185 280 2.3E-19 T 13-10-2018 IPR005644 NolW-like Y11_p0661 99fcb77b3f456ea67ee1a31a3aaebcb1 607 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 36 510 8.4E-185 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Y11_p0661 99fcb77b3f456ea67ee1a31a3aaebcb1 607 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 455 488 - T 13-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 Y11_p0661 99fcb77b3f456ea67ee1a31a3aaebcb1 607 Pfam PF00263 Bacterial type II and III secretion system protein 350 510 1.3E-40 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Y11_p0661 99fcb77b3f456ea67ee1a31a3aaebcb1 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 196 213 9.4E-38 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Y11_p0661 99fcb77b3f456ea67ee1a31a3aaebcb1 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 397 412 9.4E-38 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Y11_p0661 99fcb77b3f456ea67ee1a31a3aaebcb1 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 363 382 9.4E-38 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Y11_p0661 99fcb77b3f456ea67ee1a31a3aaebcb1 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 283 303 9.4E-38 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Y11_p0661 99fcb77b3f456ea67ee1a31a3aaebcb1 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 488 507 9.4E-38 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Y11_22141 e114c26cf999bd89082ea23f225ea178 188 SUPERFAMILY SSF56784 4 185 1.6E-45 T 13-10-2018 IPR036412 HAD-like superfamily Y11_22141 e114c26cf999bd89082ea23f225ea178 188 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 164 1.0E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_22141 e114c26cf999bd89082ea23f225ea178 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 3.2E-60 T 13-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase Y11_22141 e114c26cf999bd89082ea23f225ea178 188 Gene3D G3DSA:1.10.150.240 18 89 3.1E-48 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Y11_22141 e114c26cf999bd89082ea23f225ea178 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 122 183 7.5E-15 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_22141 e114c26cf999bd89082ea23f225ea178 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 3.2E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_22141 e114c26cf999bd89082ea23f225ea178 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 3.2E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_22141 e114c26cf999bd89082ea23f225ea178 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 4.7E-31 T 13-10-2018 Y11_22141 e114c26cf999bd89082ea23f225ea178 188 Gene3D G3DSA:3.40.50.1000 7 185 3.1E-48 T 13-10-2018 IPR023214 HAD superfamily Y11_20281 a8c3d0b347862b5ae8b3910fe0dd9580 243 Pfam PF00950 ABC 3 transport family 1 231 6.6E-41 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Y11_20281 a8c3d0b347862b5ae8b3910fe0dd9580 243 SUPERFAMILY SSF81345 2 228 1.06E-17 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_27741 0d37b7dce27cddef467686bd0f37778f 296 SUPERFAMILY SSF161098 8 296 1.5E-69 T 13-10-2018 IPR035906 MetI-like superfamily Y11_27741 0d37b7dce27cddef467686bd0f37778f 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 286 6.4E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_27741 0d37b7dce27cddef467686bd0f37778f 296 Gene3D G3DSA:1.10.3720.10 1 283 5.3E-73 T 13-10-2018 IPR035906 MetI-like superfamily Y11_09871 5804477527a948622f9ab1ca457cd571 303 Gene3D G3DSA:3.40.190.10 165 272 9.6E-57 T 13-10-2018 Y11_09871 5804477527a948622f9ab1ca457cd571 303 SUPERFAMILY SSF53850 90 296 3.91E-38 T 13-10-2018 Y11_09871 5804477527a948622f9ab1ca457cd571 303 Gene3D G3DSA:3.40.190.10 90 282 9.6E-57 T 13-10-2018 Y11_09871 5804477527a948622f9ab1ca457cd571 303 SUPERFAMILY SSF46785 4 87 5.06E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_09871 5804477527a948622f9ab1ca457cd571 303 Pfam PF03466 LysR substrate binding domain 89 294 4.9E-43 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_09871 5804477527a948622f9ab1ca457cd571 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.4E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_09871 5804477527a948622f9ab1ca457cd571 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.4E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_09871 5804477527a948622f9ab1ca457cd571 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.4E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_09871 5804477527a948622f9ab1ca457cd571 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 6.9E-22 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_09871 5804477527a948622f9ab1ca457cd571 303 Gene3D G3DSA:1.10.10.10 1 86 1.2E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_25231 c7c30aed8b35a450dfe177867afb6789 479 Pfam PF12571 Phage tail-collar fibre protein 1 150 4.1E-62 T 13-10-2018 IPR022225 Phage tail fibre protein Y11_25231 c7c30aed8b35a450dfe177867afb6789 479 Pfam PF03406 Phage tail fibre repeat 182 219 7.3E-17 T 13-10-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 Y11_13421 c7c30aed8b35a450dfe177867afb6789 479 Pfam PF12571 Phage tail-collar fibre protein 1 150 4.1E-62 T 13-10-2018 IPR022225 Phage tail fibre protein Y11_13421 c7c30aed8b35a450dfe177867afb6789 479 Pfam PF03406 Phage tail fibre repeat 182 219 7.3E-17 T 13-10-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 Y11_34911 cbf0d0004008679f39e851c6366c3c6e 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 13-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_34911 cbf0d0004008679f39e851c6366c3c6e 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 2.9E-107 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Y11_34911 cbf0d0004008679f39e851c6366c3c6e 234 PIRSF PIRSF002155 1 227 6.0E-78 T 13-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_34911 cbf0d0004008679f39e851c6366c3c6e 234 SUPERFAMILY SSF56808 6 225 1.18E-82 T 13-10-2018 IPR023674 Ribosomal protein L1-like Y11_34911 cbf0d0004008679f39e851c6366c3c6e 234 Gene3D G3DSA:3.40.50.790 68 159 8.4E-81 T 13-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Y11_34911 cbf0d0004008679f39e851c6366c3c6e 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.443 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Y11_34911 cbf0d0004008679f39e851c6366c3c6e 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.0E-51 T 13-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Y11_34911 cbf0d0004008679f39e851c6366c3c6e 234 Gene3D G3DSA:3.30.190.20 25 222 8.4E-81 T 13-10-2018 Y11_17051 8f38765476039d8a91ecd66eb542f24d 221 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 133 216 9.6E-9 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Y11_17051 8f38765476039d8a91ecd66eb542f24d 221 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 30 202 1.0E-54 T 13-10-2018 Y11_34711 c3d82d92e40271a495bdd7001ea3f8b4 162 Gene3D G3DSA:3.30.70.940 1 162 7.4E-54 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Y11_34711 c3d82d92e40271a495bdd7001ea3f8b4 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 1.2E-56 T 13-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 Y11_34711 c3d82d92e40271a495bdd7001ea3f8b4 162 SMART SM00738 1 100 9.1E-26 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Y11_34711 c3d82d92e40271a495bdd7001ea3f8b4 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 45.696 T 13-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 Y11_34711 c3d82d92e40271a495bdd7001ea3f8b4 162 SUPERFAMILY SSF82679 1 100 1.7E-25 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Y11_34711 c3d82d92e40271a495bdd7001ea3f8b4 162 Pfam PF02357 Transcription termination factor nusG 2 94 1.5E-16 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Y11_05591 eb51b070bb17c0bc86898c237b1e5db5 373 Gene3D G3DSA:2.60.120.650 2 204 3.3E-86 T 13-10-2018 Y11_05591 eb51b070bb17c0bc86898c237b1e5db5 373 SMART SM00558 87 215 1.1E-9 T 13-10-2018 IPR003347 JmjC domain Y11_05591 eb51b070bb17c0bc86898c237b1e5db5 373 Gene3D G3DSA:1.10.10.2510 205 372 1.7E-63 T 13-10-2018 Y11_05591 eb51b070bb17c0bc86898c237b1e5db5 373 Pfam PF08007 Cupin superfamily protein 10 310 3.2E-102 T 13-10-2018 IPR003347 JmjC domain Y11_05591 eb51b070bb17c0bc86898c237b1e5db5 373 SUPERFAMILY SSF51197 7 289 1.06E-74 T 13-10-2018 Y11_06431 85f8b28d403fd15443466bdaaec2fd31 91 Gene3D G3DSA:3.10.450.300 1 89 4.2E-38 T 13-10-2018 IPR038703 YebF/Cmi superfamily Y11_06431 85f8b28d403fd15443466bdaaec2fd31 91 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 1 87 7.0E-37 T 13-10-2018 IPR025603 YebF/Colicin-M immunity protein Y11_06431 85f8b28d403fd15443466bdaaec2fd31 91 Pfam PF13995 YebF-like protein 2 87 3.1E-39 T 13-10-2018 IPR025603 YebF/Colicin-M immunity protein Y11_10581 87bc3e430f8830f75e87515d3447882e 263 Gene3D G3DSA:1.20.144.10 12 263 1.2E-77 T 13-10-2018 Y11_10581 87bc3e430f8830f75e87515d3447882e 263 Pfam PF01569 PAP2 superfamily 90 242 3.3E-26 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Y11_10581 87bc3e430f8830f75e87515d3447882e 263 SMART SM00014 86 237 1.1E-31 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Y11_10581 87bc3e430f8830f75e87515d3447882e 263 SUPERFAMILY SSF48317 9 244 6.02E-31 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Y11_30611 82738165cc7430061e533cd6d05ac120 331 Gene3D G3DSA:3.40.50.2300 129 317 3.0E-123 T 13-10-2018 Y11_30611 82738165cc7430061e533cd6d05ac120 331 Gene3D G3DSA:3.40.50.2300 29 305 3.0E-123 T 13-10-2018 Y11_30611 82738165cc7430061e533cd6d05ac120 331 Pfam PF13407 Periplasmic binding protein domain 38 286 9.4E-61 T 13-10-2018 IPR025997 Periplasmic binding protein Y11_30611 82738165cc7430061e533cd6d05ac120 331 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 330 1.9E-164 T 13-10-2018 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 Y11_30611 82738165cc7430061e533cd6d05ac120 331 SUPERFAMILY SSF53822 24 317 3.08E-71 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_33261 a0aa886a999b9a15725b3e9e0d559dae 137 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 19 55 8.4E-18 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Y11_33261 a0aa886a999b9a15725b3e9e0d559dae 137 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 63 99 1.3E-14 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Y11_33261 a0aa886a999b9a15725b3e9e0d559dae 137 SUPERFAMILY SSF57783 17 55 5.95E-14 T 13-10-2018 Y11_33261 a0aa886a999b9a15725b3e9e0d559dae 137 Gene3D G3DSA:3.30.65.10 10 56 3.9E-10 T 13-10-2018 Y11_31761 8f130b23f43c23cc55281620d77f878b 438 PIRSF PIRSF002746 1 438 9.7E-161 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Y11_31761 8f130b23f43c23cc55281620d77f878b 438 Pfam PF02447 GntP family permease 1 437 1.2E-184 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Y11_31761 8f130b23f43c23cc55281620d77f878b 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 4.6E-198 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Y11_23121 3c53d3ef59df11b0588c09f479a83fd3 303 Gene3D G3DSA:3.90.190.10 17 299 1.1E-31 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like Y11_23121 3c53d3ef59df11b0588c09f479a83fd3 303 SMART SM00404 172 291 3.9E-9 T 13-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic Y11_23121 3c53d3ef59df11b0588c09f479a83fd3 303 SMART SM00194 27 294 2.8E-4 T 13-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 Y11_23121 3c53d3ef59df11b0588c09f479a83fd3 303 PRINTS PR01371 Salmonella/Yersinia modular tyrosine phosphatase signature 84 97 2.4E-5 T 13-10-2018 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH GO:0004725|GO:0006470 Y11_23121 3c53d3ef59df11b0588c09f479a83fd3 303 PRINTS PR01371 Salmonella/Yersinia modular tyrosine phosphatase signature 231 242 2.4E-5 T 13-10-2018 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH GO:0004725|GO:0006470 Y11_23121 3c53d3ef59df11b0588c09f479a83fd3 303 PRINTS PR01371 Salmonella/Yersinia modular tyrosine phosphatase signature 133 149 2.4E-5 T 13-10-2018 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH GO:0004725|GO:0006470 Y11_23121 3c53d3ef59df11b0588c09f479a83fd3 303 SUPERFAMILY SSF52799 70 296 1.7E-23 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like Y11_23121 3c53d3ef59df11b0588c09f479a83fd3 303 PRINTS PR00700 Protein tyrosine phosphatase signature 275 285 7.2E-8 T 13-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 Y11_23121 3c53d3ef59df11b0588c09f479a83fd3 303 PRINTS PR00700 Protein tyrosine phosphatase signature 88 108 7.2E-8 T 13-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 Y11_23121 3c53d3ef59df11b0588c09f479a83fd3 303 PRINTS PR00700 Protein tyrosine phosphatase signature 230 248 7.2E-8 T 13-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 Y11_23121 3c53d3ef59df11b0588c09f479a83fd3 303 Pfam PF00102 Protein-tyrosine phosphatase 76 288 4.5E-15 T 13-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 Y11_23121 3c53d3ef59df11b0588c09f479a83fd3 303 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 233 243 - T 13-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 Y11_22621 d456b63894f8b37039994aac0ae5974d 164 Pfam PF00419 Fimbrial protein 29 164 3.6E-18 T 13-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 Y11_22621 d456b63894f8b37039994aac0ae5974d 164 SUPERFAMILY SSF49401 37 164 2.98E-21 T 13-10-2018 IPR008966 Adhesion domain superfamily Y11_22621 d456b63894f8b37039994aac0ae5974d 164 Gene3D G3DSA:2.60.40.1090 40 164 2.3E-33 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Y11_32361 5b61a32db2049309ebd21d5134994c8c 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 9.8E-19 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Y11_32361 5b61a32db2049309ebd21d5134994c8c 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 9.8E-19 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Y11_32361 5b61a32db2049309ebd21d5134994c8c 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 9.8E-19 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Y11_32361 5b61a32db2049309ebd21d5134994c8c 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 9.8E-19 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Y11_32361 5b61a32db2049309ebd21d5134994c8c 270 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Y11_32361 5b61a32db2049309ebd21d5134994c8c 270 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 2.0E-75 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Y11_32361 5b61a32db2049309ebd21d5134994c8c 270 PIRSF PIRSF000398 1 270 3.1E-66 T 13-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 Y11_32361 5b61a32db2049309ebd21d5134994c8c 270 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 6.9E-96 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Y11_32361 5b61a32db2049309ebd21d5134994c8c 270 Gene3D G3DSA:1.10.1020.10 57 156 4.8E-86 T 13-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 Y11_32361 5b61a32db2049309ebd21d5134994c8c 270 SUPERFAMILY SSF53335 5 268 2.95E-73 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_32361 5b61a32db2049309ebd21d5134994c8c 270 Gene3D G3DSA:3.40.50.150 7 239 4.8E-86 T 13-10-2018 Y11_28931 172ac93d88cf9016235cefae9e4a7ec6 260 Gene3D G3DSA:3.90.550.10 1 210 2.4E-27 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_28931 172ac93d88cf9016235cefae9e4a7ec6 260 SUPERFAMILY SSF53448 3 148 2.91E-28 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_28931 172ac93d88cf9016235cefae9e4a7ec6 260 Pfam PF00535 Glycosyl transferase family 2 8 134 2.6E-20 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Y11_08231 743c9a3e5670774d59f07cc3bfa388b6 140 Pfam PF02657 Fe-S metabolism associated domain 12 132 6.2E-44 T 13-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like Y11_08231 743c9a3e5670774d59f07cc3bfa388b6 140 Gene3D G3DSA:3.90.1010.10 2 139 2.8E-52 T 13-10-2018 Y11_08231 743c9a3e5670774d59f07cc3bfa388b6 140 SUPERFAMILY SSF82649 4 134 6.28E-46 T 13-10-2018 Y11_08231 743c9a3e5670774d59f07cc3bfa388b6 140 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 42.798 T 13-10-2018 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 Y11_08091 ed1e05610995e2baeb37f629ebb3c83f 353 SUPERFAMILY SSF144064 5 347 7.26E-122 T 13-10-2018 Y11_08091 ed1e05610995e2baeb37f629ebb3c83f 353 Gene3D G3DSA:3.40.1570.10 82 339 7.6E-120 T 13-10-2018 Y11_08091 ed1e05610995e2baeb37f629ebb3c83f 353 Pfam PF05171 Haemin-degrading HemS.ChuX domain 206 345 1.7E-34 T 13-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 Y11_08091 ed1e05610995e2baeb37f629ebb3c83f 353 Pfam PF05171 Haemin-degrading HemS.ChuX domain 29 157 1.7E-35 T 13-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 Y11_08091 ed1e05610995e2baeb37f629ebb3c83f 353 Gene3D G3DSA:3.40.1570.10 13 288 7.6E-120 T 13-10-2018 Y11_39541 9293804f748eaeeed3177d92a32eba0e 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Y11_39541 9293804f748eaeeed3177d92a32eba0e 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 9.1E-46 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Y11_39541 9293804f748eaeeed3177d92a32eba0e 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 8.1E-37 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Y11_39541 9293804f748eaeeed3177d92a32eba0e 159 Gene3D G3DSA:3.30.70.560 1 159 2.1E-60 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Y11_39541 9293804f748eaeeed3177d92a32eba0e 159 SUPERFAMILY SSF55083 1 157 3.53E-54 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Y11_02461 df441d5b15f0425a4f168efacd5c8d7d 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 6.9E-150 T 13-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 Y11_02461 df441d5b15f0425a4f168efacd5c8d7d 285 Gene3D G3DSA:3.90.226.10 1 222 1.3E-85 T 13-10-2018 Y11_02461 df441d5b15f0425a4f168efacd5c8d7d 285 Gene3D G3DSA:1.10.12.10 223 273 2.4E-31 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Y11_02461 df441d5b15f0425a4f168efacd5c8d7d 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 3.8E-79 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Y11_02461 df441d5b15f0425a4f168efacd5c8d7d 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.7 T 13-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 Y11_02461 df441d5b15f0425a4f168efacd5c8d7d 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Y11_02461 df441d5b15f0425a4f168efacd5c8d7d 285 SUPERFAMILY SSF52096 18 280 7.12E-78 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Y11_27061 7589e3c05dc90cd4694a826a658b5649 428 Pfam PF13657 HipA N-terminal domain 23 121 4.8E-16 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 Y11_27061 7589e3c05dc90cd4694a826a658b5649 428 Gene3D G3DSA:1.10.1070.20 280 352 3.4E-5 T 13-10-2018 Y11_27061 7589e3c05dc90cd4694a826a658b5649 428 Pfam PF07804 HipA-like C-terminal domain 165 393 2.0E-37 T 13-10-2018 IPR012893 HipA-like, C-terminal Y11_42471 6eb70af33e1cd3dc5e0e0eb789c160f2 486 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 475 49.217 T 13-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 Y11_42471 6eb70af33e1cd3dc5e0e0eb789c160f2 486 SUPERFAMILY SSF53955 290 451 4.22E-35 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Y11_42471 6eb70af33e1cd3dc5e0e0eb789c160f2 486 SMART SM00062 44 268 2.1E-33 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_42471 6eb70af33e1cd3dc5e0e0eb789c160f2 486 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 309 337 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Y11_42471 6eb70af33e1cd3dc5e0e0eb789c160f2 486 SUPERFAMILY SSF53850 40 267 2.76E-37 T 13-10-2018 Y11_42471 6eb70af33e1cd3dc5e0e0eb789c160f2 486 Gene3D G3DSA:3.40.190.10 129 224 1.4E-61 T 13-10-2018 Y11_42471 6eb70af33e1cd3dc5e0e0eb789c160f2 486 Pfam PF01464 Transglycosylase SLT domain 297 402 3.7E-23 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Y11_42471 6eb70af33e1cd3dc5e0e0eb789c160f2 486 Gene3D G3DSA:3.40.190.10 38 263 1.4E-61 T 13-10-2018 Y11_42471 6eb70af33e1cd3dc5e0e0eb789c160f2 486 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 267 3.6E-31 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_42471 6eb70af33e1cd3dc5e0e0eb789c160f2 486 Gene3D G3DSA:1.10.530.10 286 468 1.4E-33 T 13-10-2018 Y11_02181 ef78086e29a0633f13bb47ea62d64473 187 Gene3D G3DSA:3.40.30.10 104 186 1.2E-22 T 13-10-2018 Y11_02181 ef78086e29a0633f13bb47ea62d64473 187 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 45 186 3.8E-50 T 13-10-2018 Y11_02181 ef78086e29a0633f13bb47ea62d64473 187 Gene3D G3DSA:1.10.10.1590 33 103 7.2E-18 T 13-10-2018 Y11_02181 ef78086e29a0633f13bb47ea62d64473 187 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 43 186 1.0E-51 T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02181 ef78086e29a0633f13bb47ea62d64473 187 PIRSF PIRSF000216 18 187 4.8E-53 T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02181 ef78086e29a0633f13bb47ea62d64473 187 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 144 162 - T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02181 ef78086e29a0633f13bb47ea62d64473 187 SUPERFAMILY SSF52833 36 186 1.45E-48 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_24781 5f89c05a1fe0bc6b7f9888683df35338 767 Pfam PF08497 Radical SAM N-terminal 28 375 4.7E-146 T 13-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal Y11_24781 5f89c05a1fe0bc6b7f9888683df35338 767 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 28 640 2.9E-266 T 13-10-2018 IPR022946 Uncharacterised protein family UPF0313 Y11_24781 5f89c05a1fe0bc6b7f9888683df35338 767 SMART SM00729 372 622 1.7E-6 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Y11_24781 5f89c05a1fe0bc6b7f9888683df35338 767 Gene3D G3DSA:3.80.30.20 371 624 1.5E-13 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Y11_24781 5f89c05a1fe0bc6b7f9888683df35338 767 SUPERFAMILY SSF102114 361 652 7.72E-11 T 13-10-2018 Y11_24781 5f89c05a1fe0bc6b7f9888683df35338 767 Pfam PF11842 Domain of unknown function (DUF3362) 590 735 5.3E-44 T 13-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal Y11_24781 5f89c05a1fe0bc6b7f9888683df35338 767 Pfam PF04055 Radical SAM superfamily 376 581 3.1E-19 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_24781 5f89c05a1fe0bc6b7f9888683df35338 767 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 376 396 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Y11_24781 5f89c05a1fe0bc6b7f9888683df35338 767 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 28 642 50.645 T 13-10-2018 IPR022946 Uncharacterised protein family UPF0313 Y11_08081 7746cd10a2ca0281f375fd7905b7b4c7 277 Gene3D G3DSA:3.40.50.1980 25 145 1.3E-37 T 13-10-2018 Y11_08081 7746cd10a2ca0281f375fd7905b7b4c7 277 SUPERFAMILY SSF53807 26 270 3.3E-45 T 13-10-2018 Y11_08081 7746cd10a2ca0281f375fd7905b7b4c7 277 Gene3D G3DSA:3.40.50.1980 146 276 3.7E-42 T 13-10-2018 Y11_08081 7746cd10a2ca0281f375fd7905b7b4c7 277 Pfam PF01497 Periplasmic binding protein 28 253 1.4E-29 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain Y11_35841 3d10571cb471066e18978ffaf03d550e 112 SUPERFAMILY SSF54913 10 110 9.64E-35 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Y11_35841 3d10571cb471066e18978ffaf03d550e 112 Hamap MF_01160 Divalent-cation tolerance protein CutA [cutA]. 6 112 35.606 T 13-10-2018 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria GO:0005507|GO:0005737 Y11_35841 3d10571cb471066e18978ffaf03d550e 112 Gene3D G3DSA:3.30.70.120 1 111 4.5E-40 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Y11_35841 3d10571cb471066e18978ffaf03d550e 112 Pfam PF03091 CutA1 divalent ion tolerance protein 12 109 1.9E-33 T 13-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 Y11_04851 8b3596e808019086103a4e7667184cf3 171 Gene3D G3DSA:3.40.30.10 11 168 1.8E-37 T 13-10-2018 Y11_04851 8b3596e808019086103a4e7667184cf3 171 SUPERFAMILY SSF52833 31 163 1.91E-32 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_04851 8b3596e808019086103a4e7667184cf3 171 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 15 162 7.0E-42 T 13-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 Y11_04851 8b3596e808019086103a4e7667184cf3 171 Pfam PF08534 Redoxin 29 152 1.0E-14 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Y11_04851 8b3596e808019086103a4e7667184cf3 171 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Y11_17211 b845fb8243df0b774f71e9802eb0616c 220 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 218 1.8E-85 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Y11_17211 b845fb8243df0b774f71e9802eb0616c 220 Gene3D G3DSA:1.10.286.10 1 84 1.1E-39 T 13-10-2018 Y11_17211 b845fb8243df0b774f71e9802eb0616c 220 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 13-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Y11_17211 b845fb8243df0b774f71e9802eb0616c 220 SUPERFAMILY SSF55620 5 219 8.89E-75 T 13-10-2018 Y11_17211 b845fb8243df0b774f71e9802eb0616c 220 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 34.139 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Y11_17211 b845fb8243df0b774f71e9802eb0616c 220 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 13-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Y11_17211 b845fb8243df0b774f71e9802eb0616c 220 Pfam PF01227 GTP cyclohydrolase I 38 216 2.8E-63 T 13-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Y11_17211 b845fb8243df0b774f71e9802eb0616c 220 Gene3D G3DSA:3.30.1130.10 85 220 3.0E-54 T 13-10-2018 Y11_08731 75b912a7e7e20639c90beefcd1e81abe 134 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 22 134 2.6E-38 T 13-10-2018 IPR014320 Phage shock protein, PspC Y11_08731 75b912a7e7e20639c90beefcd1e81abe 134 Pfam PF04024 PspC domain 23 80 1.6E-16 T 13-10-2018 IPR007168 Phage shock protein, PspC, N-terminal Y11_19251 47a1da0169174cda6539143ef78affed 370 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 11 366 29.202 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_19251 47a1da0169174cda6539143ef78affed 370 Pfam PF01098 Cell cycle protein 21 364 1.5E-122 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_19251 47a1da0169174cda6539143ef78affed 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 1.2E-136 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_19251 47a1da0169174cda6539143ef78affed 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_28651 d194f152a0616156e1b9f9c02342a2c8 489 Gene3D G3DSA:3.10.450.50 385 489 4.6E-6 T 13-10-2018 Y11_28651 d194f152a0616156e1b9f9c02342a2c8 489 Pfam PF02810 SEC-C motif 470 488 2.0E-8 T 13-10-2018 IPR004027 SEC-C motif Y11_28651 d194f152a0616156e1b9f9c02342a2c8 489 SUPERFAMILY SSF103642 468 488 1.55E-5 T 13-10-2018 Y11_28881 90a23e0058477b0b0f62c510c47ce76d 415 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 258 267 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Y11_28881 90a23e0058477b0b0f62c510c47ce76d 415 Gene3D G3DSA:3.40.640.10 75 313 6.6E-139 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_28881 90a23e0058477b0b0f62c510c47ce76d 415 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 22 414 5.8E-218 T 13-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 Y11_28881 90a23e0058477b0b0f62c510c47ce76d 415 Pfam PF00155 Aminotransferase class I and II 60 403 5.1E-78 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_28881 90a23e0058477b0b0f62c510c47ce76d 415 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 19 412 53.679 T 13-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 Y11_28881 90a23e0058477b0b0f62c510c47ce76d 415 SUPERFAMILY SSF53383 20 413 1.88E-126 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_28881 90a23e0058477b0b0f62c510c47ce76d 415 Gene3D G3DSA:3.90.1150.10 55 404 6.6E-139 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_13931 54a0da4351fd94e642b6b785b1c1076d 123 Gene3D G3DSA:1.10.10.10 33 120 2.7E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_13931 54a0da4351fd94e642b6b785b1c1076d 123 SUPERFAMILY SSF46785 49 119 6.93E-7 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_06211 a51bafd40e7240262ede5319b6377652 265 Gene3D G3DSA:3.40.710.10 2 165 1.8E-73 T 13-10-2018 Y11_06211 a51bafd40e7240262ede5319b6377652 265 SUPERFAMILY SSF56601 2 258 3.76E-56 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_06211 a51bafd40e7240262ede5319b6377652 265 Gene3D G3DSA:3.30.450.330 166 239 1.8E-73 T 13-10-2018 Y11_06211 a51bafd40e7240262ede5319b6377652 265 Pfam PF00905 Penicillin binding protein transpeptidase domain 2 243 2.7E-55 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Y11_24331 2125fc4b58dcd5300a89d023db6c630d 141 Pfam PF00460 Flagella basal body rod protein 8 31 1.1E-6 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Y11_24331 2125fc4b58dcd5300a89d023db6c630d 141 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 94 138 1.1E-9 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Y11_24331 2125fc4b58dcd5300a89d023db6c630d 141 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Y11_24331 2125fc4b58dcd5300a89d023db6c630d 141 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 6 139 1.3E-40 T 13-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 Y11_12691 f6d9beac5813e5b6ce6524b354c0d704 294 Pfam PF00561 alpha/beta hydrolase fold 9 201 1.8E-12 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_12691 f6d9beac5813e5b6ce6524b354c0d704 294 Gene3D G3DSA:3.40.50.1820 7 294 2.4E-81 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_12691 f6d9beac5813e5b6ce6524b354c0d704 294 SUPERFAMILY SSF53474 8 266 1.21E-41 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_34191 571fb0240f32123e04546c21bee00ab5 208 Pfam PF07947 YhhN family 26 206 2.4E-45 T 13-10-2018 IPR012506 YhhN-like GO:0016021 Y11_21691 6cd2b5223c79d628e0d3b50a054b2798 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 1.2E-47 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_21691 6cd2b5223c79d628e0d3b50a054b2798 263 Gene3D G3DSA:3.40.190.10 28 246 5.4E-54 T 13-10-2018 Y11_21691 6cd2b5223c79d628e0d3b50a054b2798 263 SUPERFAMILY SSF53850 3 255 2.58E-53 T 13-10-2018 Y11_21691 6cd2b5223c79d628e0d3b50a054b2798 263 SMART SM00062 36 256 1.4E-43 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_21691 6cd2b5223c79d628e0d3b50a054b2798 263 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site Y11_21691 6cd2b5223c79d628e0d3b50a054b2798 263 Gene3D G3DSA:3.40.190.10 123 214 5.4E-54 T 13-10-2018 Y11_27241 64804f5edac469f7ff763d4e1b55f86e 293 SUPERFAMILY SSF53335 42 290 1.41E-44 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_27241 64804f5edac469f7ff763d4e1b55f86e 293 Gene3D G3DSA:3.40.50.150 101 293 1.4E-56 T 13-10-2018 Y11_27241 64804f5edac469f7ff763d4e1b55f86e 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.424 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Y11_27241 64804f5edac469f7ff763d4e1b55f86e 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 2.8E-101 T 13-10-2018 Y11_27241 64804f5edac469f7ff763d4e1b55f86e 293 PIRSF PIRSF000401 1 293 1.6E-90 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Y11_27241 64804f5edac469f7ff763d4e1b55f86e 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 3.8E-117 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Y11_08621 f8707ba627c1942c169fe83476ba6cc4 271 Gene3D G3DSA:3.40.50.300 3 266 9.5E-73 T 13-10-2018 Y11_08621 f8707ba627c1942c169fe83476ba6cc4 271 Pfam PF00005 ABC transporter 31 178 3.8E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_08621 f8707ba627c1942c169fe83476ba6cc4 271 SUPERFAMILY SSF52540 5 249 9.27E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_08621 f8707ba627c1942c169fe83476ba6cc4 271 SMART SM00382 39 228 1.5E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_08621 f8707ba627c1942c169fe83476ba6cc4 271 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_22391 2242805a55009ae238db2a2cf299632b 163 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 152 1.8E-61 T 13-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 Y11_22391 2242805a55009ae238db2a2cf299632b 163 SUPERFAMILY SSF52728 1 159 1.96E-53 T 13-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 Y11_22391 2242805a55009ae238db2a2cf299632b 163 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 1.9E-52 T 13-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 Y11_22391 2242805a55009ae238db2a2cf299632b 163 Gene3D G3DSA:3.40.35.10 1 162 6.1E-56 T 13-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 Y11_08141 ba4ca2853184438a39533e316f6d2f98 793 Gene3D G3DSA:3.20.20.60 480 792 4.2E-99 T 13-10-2018 Y11_08141 ba4ca2853184438a39533e316f6d2f98 793 Pfam PF00391 PEP-utilising enzyme, mobile domain 386 457 1.2E-26 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Y11_08141 ba4ca2853184438a39533e316f6d2f98 793 SUPERFAMILY SSF56059 10 386 1.41E-105 T 13-10-2018 Y11_08141 ba4ca2853184438a39533e316f6d2f98 793 SUPERFAMILY SSF51621 470 790 1.49E-95 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Y11_08141 ba4ca2853184438a39533e316f6d2f98 793 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 349 3.7E-118 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Y11_08141 ba4ca2853184438a39533e316f6d2f98 793 Gene3D G3DSA:3.30.1490.20 9 197 8.5E-70 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Y11_08141 ba4ca2853184438a39533e316f6d2f98 793 Gene3D G3DSA:3.30.470.20 198 359 2.7E-60 T 13-10-2018 Y11_08141 ba4ca2853184438a39533e316f6d2f98 793 PIRSF PIRSF000854 7 793 0.0 T 13-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Y11_08141 ba4ca2853184438a39533e316f6d2f98 793 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 790 0.0 T 13-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Y11_08141 ba4ca2853184438a39533e316f6d2f98 793 SUPERFAMILY SSF52009 350 468 1.18E-35 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Y11_08141 ba4ca2853184438a39533e316f6d2f98 793 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 696 714 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Y11_08141 ba4ca2853184438a39533e316f6d2f98 793 Gene3D G3DSA:3.50.30.10 363 479 6.3E-41 T 13-10-2018 Y11_08141 ba4ca2853184438a39533e316f6d2f98 793 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 416 427 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Y11_08141 ba4ca2853184438a39533e316f6d2f98 793 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 484 787 6.2E-59 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Y11_20261 0ae7c15400a099c15f6340fee359fa55 47 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_20261 0ae7c15400a099c15f6340fee359fa55 47 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 41 0.002 T 13-10-2018 Y11_20261 0ae7c15400a099c15f6340fee359fa55 47 SUPERFAMILY SSF57840 8 41 7.59E-14 T 13-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_20261 0ae7c15400a099c15f6340fee359fa55 47 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.15 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_20261 0ae7c15400a099c15f6340fee359fa55 47 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 9 41 1.5E-9 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_20261 0ae7c15400a099c15f6340fee359fa55 47 Pfam PF00444 Ribosomal protein L36 1 41 2.6E-17 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_06831 a16443096e6092d74920f5366ed8d704 172 SUPERFAMILY SSF53067 25 170 9.06E-5 T 13-10-2018 Y11_06831 a16443096e6092d74920f5366ed8d704 172 Gene3D G3DSA:3.30.420.150 13 170 3.3E-9 T 13-10-2018 Y11_13991 72ca86af39fcdb4ca84cbfaa3427dc53 169 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 168 3.9E-99 T 13-10-2018 IPR022523 Flagellar regulator, FliZ Y11_13991 72ca86af39fcdb4ca84cbfaa3427dc53 169 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 91 167 1.2E-8 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Y11_25731 32ce916f71a4e6121e5a6c4154079be9 395 Gene3D G3DSA:3.40.50.150 8 181 4.1E-57 T 13-10-2018 Y11_25731 32ce916f71a4e6121e5a6c4154079be9 395 Pfam PF05175 Methyltransferase small domain 200 371 2.2E-52 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Y11_25731 32ce916f71a4e6121e5a6c4154079be9 395 SUPERFAMILY SSF53335 197 372 7.55E-23 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_25731 32ce916f71a4e6121e5a6c4154079be9 395 Gene3D G3DSA:3.40.50.150 185 380 5.5E-49 T 13-10-2018 Y11_25731 32ce916f71a4e6121e5a6c4154079be9 395 PIRSF PIRSF037565 1 375 8.9E-165 T 13-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 Y11_25731 32ce916f71a4e6121e5a6c4154079be9 395 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 374 49.971 T 13-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 Y11_25731 32ce916f71a4e6121e5a6c4154079be9 395 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Y11_20611 285800b18d1e41eccc2f0a9388e9bf30 318 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 220 1.3E-5 T 13-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20611 285800b18d1e41eccc2f0a9388e9bf30 318 PIRSF PIRSF000292 1 313 2.3E-133 T 13-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 Y11_20611 285800b18d1e41eccc2f0a9388e9bf30 318 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 240 4.2E-114 T 13-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 Y11_20611 285800b18d1e41eccc2f0a9388e9bf30 318 Gene3D G3DSA:2.60.40.420 113 283 1.2E-59 T 13-10-2018 IPR008972 Cupredoxin Y11_20611 285800b18d1e41eccc2f0a9388e9bf30 318 Gene3D G3DSA:1.10.287.90 28 112 3.3E-32 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20611 285800b18d1e41eccc2f0a9388e9bf30 318 Pfam PF06481 COX Aromatic Rich Motif 240 286 2.8E-21 T 13-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 Y11_20611 285800b18d1e41eccc2f0a9388e9bf30 318 SUPERFAMILY SSF81464 18 116 2.29E-23 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_20611 285800b18d1e41eccc2f0a9388e9bf30 318 SUPERFAMILY SSF49503 124 282 7.74E-53 T 13-10-2018 IPR008972 Cupredoxin Y11_16571 86d4775dbb69f1602011af832e8fd154 245 Pfam PF00977 Histidine biosynthesis protein 1 233 1.8E-77 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Y11_16571 86d4775dbb69f1602011af832e8fd154 245 SUPERFAMILY SSF51366 1 242 8.07E-67 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Y11_16571 86d4775dbb69f1602011af832e8fd154 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 3.6E-79 T 13-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Y11_16571 86d4775dbb69f1602011af832e8fd154 245 Gene3D G3DSA:3.20.20.70 1 245 2.1E-95 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_16571 86d4775dbb69f1602011af832e8fd154 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.4 T 13-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Y11_24061 997dc9c15ab227d9541132b8b0588def 155 Pfam PF05433 Glycine zipper 2TM domain 62 103 1.3E-9 T 13-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 Y11_15341 5d9a64e3b2c07fdaabc2a5e16f1c7d6e 505 Gene3D G3DSA:3.40.1080.10 236 505 1.1E-122 T 13-10-2018 Y11_15341 5d9a64e3b2c07fdaabc2a5e16f1c7d6e 505 SUPERFAMILY SSF100950 20 233 4.51E-73 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_15341 5d9a64e3b2c07fdaabc2a5e16f1c7d6e 505 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 21 505 1.3E-239 T 13-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 Y11_15341 5d9a64e3b2c07fdaabc2a5e16f1c7d6e 505 PIRSF PIRSF009451 1 505 9.3E-258 T 13-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 Y11_15341 5d9a64e3b2c07fdaabc2a5e16f1c7d6e 505 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 40 503 4.8E-255 T 13-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 Y11_15341 5d9a64e3b2c07fdaabc2a5e16f1c7d6e 505 SUPERFAMILY SSF100950 237 503 5.16E-63 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_15341 5d9a64e3b2c07fdaabc2a5e16f1c7d6e 505 Gene3D G3DSA:3.40.1080.10 2 234 3.0E-94 T 13-10-2018 Y11_07241 1c09fa341a5b40aa47e1be927bc2fb45 143 SMART SM01022 28 141 2.0E-35 T 13-10-2018 IPR007374 ASCH domain Y11_07241 1c09fa341a5b40aa47e1be927bc2fb45 143 PIRSF PIRSF021320 5 143 1.9E-41 T 13-10-2018 IPR009326 Protein of unknown function DUF984 Y11_07241 1c09fa341a5b40aa47e1be927bc2fb45 143 Gene3D G3DSA:3.10.400.10 7 143 4.7E-43 T 13-10-2018 Y11_07241 1c09fa341a5b40aa47e1be927bc2fb45 143 Pfam PF04266 ASCH domain 33 140 3.5E-22 T 13-10-2018 IPR007374 ASCH domain Y11_07241 1c09fa341a5b40aa47e1be927bc2fb45 143 SUPERFAMILY SSF88697 12 141 2.01E-44 T 13-10-2018 IPR015947 PUA-like superfamily Y11_08301 7d2d59687e64a0e5d8324cc9c5b74cae 312 Pfam PF03466 LysR substrate binding domain 88 291 1.9E-27 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_08301 7d2d59687e64a0e5d8324cc9c5b74cae 312 Gene3D G3DSA:3.40.190.10 167 265 7.0E-14 T 13-10-2018 Y11_08301 7d2d59687e64a0e5d8324cc9c5b74cae 312 SUPERFAMILY SSF53850 89 292 1.16E-30 T 13-10-2018 Y11_08301 7d2d59687e64a0e5d8324cc9c5b74cae 312 Gene3D G3DSA:1.10.10.10 4 89 8.5E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_08301 7d2d59687e64a0e5d8324cc9c5b74cae 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.0E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_08301 7d2d59687e64a0e5d8324cc9c5b74cae 312 Gene3D G3DSA:3.40.190.10 110 280 7.0E-14 T 13-10-2018 Y11_08301 7d2d59687e64a0e5d8324cc9c5b74cae 312 SUPERFAMILY SSF46785 7 88 2.52E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_12341 91acfe15f0cf0e13dc1f3d7e99ff027f 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_12341 91acfe15f0cf0e13dc1f3d7e99ff027f 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_27391 b246c8457333a963778640b4cca94cf4 369 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 176 362 1.3E-25 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_27391 b246c8457333a963778640b4cca94cf4 369 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 158 254 4.4E-20 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Y11_27391 b246c8457333a963778640b4cca94cf4 369 Gene3D G3DSA:1.10.3720.10 146 366 3.5E-44 T 13-10-2018 IPR035906 MetI-like superfamily Y11_27391 b246c8457333a963778640b4cca94cf4 369 SUPERFAMILY SSF161098 156 354 3.27E-36 T 13-10-2018 IPR035906 MetI-like superfamily Y11_22331 b0bcef10646cc4dc12922f8ced8482ac 329 SUPERFAMILY SSF141130 28 327 2.09E-86 T 13-10-2018 Y11_22331 b0bcef10646cc4dc12922f8ced8482ac 329 Gene3D G3DSA:3.10.28.20 249 329 6.4E-15 T 13-10-2018 Y11_22331 b0bcef10646cc4dc12922f8ced8482ac 329 Gene3D G3DSA:2.60.120.580 152 247 5.5E-28 T 13-10-2018 Y11_22331 b0bcef10646cc4dc12922f8ced8482ac 329 Gene3D G3DSA:2.60.120.580 17 135 2.2E-19 T 13-10-2018 Y11_22331 b0bcef10646cc4dc12922f8ced8482ac 329 Pfam PF03069 Acetamidase/Formamidase family 182 313 3.7E-24 T 13-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 Y11_22331 b0bcef10646cc4dc12922f8ced8482ac 329 Pfam PF03069 Acetamidase/Formamidase family 31 177 2.3E-9 T 13-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 Y11_23381 20ac0615164b0ac9fde97c18f0571181 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 81 5.6E-26 T 13-10-2018 IPR003746 Protein of unknown function DUF167 Y11_23381 20ac0615164b0ac9fde97c18f0571181 96 Gene3D G3DSA:3.30.1200.10 1 96 5.8E-36 T 13-10-2018 IPR036591 YggU-like superfamily Y11_23381 20ac0615164b0ac9fde97c18f0571181 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 93 20.22 T 13-10-2018 IPR003746 Protein of unknown function DUF167 Y11_23381 20ac0615164b0ac9fde97c18f0571181 96 SUPERFAMILY SSF69786 9 95 9.55E-32 T 13-10-2018 IPR036591 YggU-like superfamily Y11_23381 20ac0615164b0ac9fde97c18f0571181 96 SMART SM01152 7 83 4.1E-37 T 13-10-2018 IPR003746 Protein of unknown function DUF167 Y11_23381 20ac0615164b0ac9fde97c18f0571181 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 91 2.4E-30 T 13-10-2018 IPR005228 Conserved hypothetical protein CHP00251 Y11_33161 aaf04471780b292897acc2344c3093e4 68 Pfam PF03889 Domain of unknown function 9 45 3.0E-21 T 13-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 Y11_23971 b6d5cab28acfe4071009887b785aee9d 94 Gene3D G3DSA:2.40.50.970 1 79 3.1E-26 T 13-10-2018 IPR037254 HupF/HypC superfamily Y11_23971 b6d5cab28acfe4071009887b785aee9d 94 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 13-10-2018 IPR019812 Hydrogenase assembly chaperone, conserved site Y11_23971 b6d5cab28acfe4071009887b785aee9d 94 Pfam PF01455 HupF/HypC family 1 72 2.8E-27 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Y11_23971 b6d5cab28acfe4071009887b785aee9d 94 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 5.3E-23 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Y11_23971 b6d5cab28acfe4071009887b785aee9d 94 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 5.3E-23 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Y11_23971 b6d5cab28acfe4071009887b785aee9d 94 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 5.3E-23 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Y11_23971 b6d5cab28acfe4071009887b785aee9d 94 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 5.3E-23 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Y11_23971 b6d5cab28acfe4071009887b785aee9d 94 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 1.6E-27 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Y11_23971 b6d5cab28acfe4071009887b785aee9d 94 SUPERFAMILY SSF159127 1 83 1.19E-25 T 13-10-2018 IPR037254 HupF/HypC superfamily Y11_23321 aa38edc788cf199d81856ebc82bd7e8f 294 SUPERFAMILY SSF56317 1 285 7.98E-82 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Y11_23321 aa38edc788cf199d81856ebc82bd7e8f 294 Pfam PF00795 Carbon-nitrogen hydrolase 5 268 8.7E-54 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Y11_23321 aa38edc788cf199d81856ebc82bd7e8f 294 Gene3D G3DSA:3.60.110.10 1 293 3.4E-105 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Y11_23321 aa38edc788cf199d81856ebc82bd7e8f 294 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 4 284 4.7E-146 T 13-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 Y11_18921 22aad295252b4d198d44818885b7da45 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 13-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Y11_18921 22aad295252b4d198d44818885b7da45 175 Pfam PF00258 Flavodoxin 6 160 1.8E-32 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Y11_18921 22aad295252b4d198d44818885b7da45 175 Gene3D G3DSA:3.40.50.360 2 175 1.2E-58 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_18921 22aad295252b4d198d44818885b7da45 175 PIRSF PIRSF038996 1 172 5.8E-70 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 Y11_18921 22aad295252b4d198d44818885b7da45 175 SUPERFAMILY SSF52218 4 171 7.69E-54 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_18921 22aad295252b4d198d44818885b7da45 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 2.0E-76 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 Y11_12471 7223b5a91c902d4cda2a5a339f43ecdf 313 Hamap MF_01666 Glyoxylate/hydroxypyruvate reductase A [ghrA]. 1 313 63.275 T 13-10-2018 IPR023514 Glyoxylate/hydroxypyruvate reductase A GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 Y11_12471 7223b5a91c902d4cda2a5a339f43ecdf 313 SUPERFAMILY SSF51735 98 278 4.35E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_12471 7223b5a91c902d4cda2a5a339f43ecdf 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 278 2.8E-43 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Y11_12471 7223b5a91c902d4cda2a5a339f43ecdf 313 Gene3D G3DSA:3.40.50.720 15 308 1.3E-113 T 13-10-2018 Y11_12471 7223b5a91c902d4cda2a5a339f43ecdf 313 Gene3D G3DSA:3.40.50.720 95 279 1.3E-113 T 13-10-2018 Y11_26711 fe3f6574b9158f4e218ecdca16924541 413 Gene3D G3DSA:2.130.10.10 38 409 3.1E-103 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Y11_26711 fe3f6574b9158f4e218ecdca16924541 413 Pfam PF10282 Lactonase, 7-bladed beta-propeller 46 406 1.6E-113 T 13-10-2018 IPR019405 Lactonase, 7-bladed beta propeller Y11_26711 fe3f6574b9158f4e218ecdca16924541 413 SUPERFAMILY SSF51004 42 406 2.88E-44 T 13-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily Y11_p0281 23f3d7219879f282c4f8fad60c8db79e 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 5.6E-122 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Y11_p0281 23f3d7219879f282c4f8fad60c8db79e 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 5.6E-122 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Y11_p0281 23f3d7219879f282c4f8fad60c8db79e 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 5.6E-122 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Y11_p0281 23f3d7219879f282c4f8fad60c8db79e 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 5.6E-122 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Y11_p0281 23f3d7219879f282c4f8fad60c8db79e 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 5.6E-122 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Y11_p0281 23f3d7219879f282c4f8fad60c8db79e 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 5.6E-122 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Y11_p0281 23f3d7219879f282c4f8fad60c8db79e 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 5.6E-122 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Y11_p0281 23f3d7219879f282c4f8fad60c8db79e 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 5.6E-122 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Y11_p0281 23f3d7219879f282c4f8fad60c8db79e 429 Pfam PF02040 Arsenical pump membrane protein 4 423 2.4E-156 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Y11_p0281 23f3d7219879f282c4f8fad60c8db79e 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 427 1.1E-214 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Y11_26931 cee0a4d704f65f071ed7a9ffc095b163 303 Gene3D G3DSA:1.10.10.10 3 88 6.6E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_26931 cee0a4d704f65f071ed7a9ffc095b163 303 Pfam PF03466 LysR substrate binding domain 89 292 1.2E-40 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_26931 cee0a4d704f65f071ed7a9ffc095b163 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.9E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_26931 cee0a4d704f65f071ed7a9ffc095b163 303 SUPERFAMILY SSF46785 4 109 1.49E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_26931 cee0a4d704f65f071ed7a9ffc095b163 303 Gene3D G3DSA:3.40.190.290 91 293 6.3E-55 T 13-10-2018 Y11_26931 cee0a4d704f65f071ed7a9ffc095b163 303 SUPERFAMILY SSF53850 90 295 7.76E-42 T 13-10-2018 Y11_37751 733f7db53ed439bdf9fbf6f380556c88 401 Gene3D G3DSA:3.40.50.2000 190 380 4.5E-21 T 13-10-2018 Y11_37751 733f7db53ed439bdf9fbf6f380556c88 401 Pfam PF00534 Glycosyl transferases group 1 213 360 7.3E-12 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Y11_37751 733f7db53ed439bdf9fbf6f380556c88 401 SUPERFAMILY SSF53756 67 385 4.04E-27 T 13-10-2018 Y11_37751 733f7db53ed439bdf9fbf6f380556c88 401 Gene3D G3DSA:3.40.50.2000 70 385 4.5E-21 T 13-10-2018 Y11_02591 3f407b199d7bc44b0ad9e5b22a01bfee 168 Pfam PF03974 Ecotin 36 158 2.0E-49 T 13-10-2018 IPR005658 Proteinase inhibitor I11, ecotin Y11_02591 3f407b199d7bc44b0ad9e5b22a01bfee 168 PIRSF PIRSF006865 1 168 3.3E-65 T 13-10-2018 IPR005658 Proteinase inhibitor I11, ecotin Y11_02591 3f407b199d7bc44b0ad9e5b22a01bfee 168 SUPERFAMILY SSF49772 32 166 1.83E-53 T 13-10-2018 IPR036198 Ecotin superfamily Y11_02591 3f407b199d7bc44b0ad9e5b22a01bfee 168 Gene3D G3DSA:2.60.40.550 22 168 1.1E-61 T 13-10-2018 Y11_02591 3f407b199d7bc44b0ad9e5b22a01bfee 168 Hamap MF_00706 Ecotin [eco]. 4 168 39.182 T 13-10-2018 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria Y11_26741 5249280ab41c2126e1dbdb6a9cd2cf30 370 SUPERFAMILY SSF53383 7 368 8.91E-35 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_26741 5249280ab41c2126e1dbdb6a9cd2cf30 370 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 4 366 1.4E-177 T 13-10-2018 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 Y11_26741 5249280ab41c2126e1dbdb6a9cd2cf30 370 Pfam PF03841 L-seryl-tRNA selenium transferase 14 270 4.8E-13 T 13-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Y11_26741 5249280ab41c2126e1dbdb6a9cd2cf30 370 Gene3D G3DSA:3.40.640.10 23 277 2.1E-49 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_08041 ea71bcabf6f5fb3c268e974c7f5945bd 117 SUPERFAMILY SSF103481 35 113 3.66E-10 T 13-10-2018 Y11_08041 ea71bcabf6f5fb3c268e974c7f5945bd 117 Gene3D G3DSA:1.10.3730.20 28 115 1.6E-7 T 13-10-2018 Y11_08041 ea71bcabf6f5fb3c268e974c7f5945bd 117 Pfam PF00892 EamA-like transporter family 30 111 2.3E-6 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_08041 ea71bcabf6f5fb3c268e974c7f5945bd 117 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 1 115 18.225 T 13-10-2018 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF Y11_29911 22696e169a5ff584f4c9ba87ed44142a 163 Pfam PF03928 Haem-degrading 31 156 6.5E-26 T 13-10-2018 IPR005624 Haem-degrading Y11_29911 22696e169a5ff584f4c9ba87ed44142a 163 SUPERFAMILY SSF143744 25 158 3.79E-33 T 13-10-2018 IPR038084 GlcG-like domain superfamily Y11_29911 22696e169a5ff584f4c9ba87ed44142a 163 Gene3D G3DSA:3.30.450.150 31 160 1.8E-36 T 13-10-2018 IPR038084 GlcG-like domain superfamily Y11_41151 c7b9512f4c3fd3dc6cec1a5100ce9944 359 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 1 358 37.791 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Y11_41151 c7b9512f4c3fd3dc6cec1a5100ce9944 359 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 356 6.0E-161 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Y11_41151 c7b9512f4c3fd3dc6cec1a5100ce9944 359 Pfam PF02684 Lipid-A-disaccharide synthetase 1 353 1.0E-135 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Y11_41151 c7b9512f4c3fd3dc6cec1a5100ce9944 359 SUPERFAMILY SSF53756 2 326 7.33E-24 T 13-10-2018 Y11_21171 227908794129cc9fd3fa0a40c2c3ba7f 256 SUPERFAMILY SSF53335 12 248 1.53E-45 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_21171 227908794129cc9fd3fa0a40c2c3ba7f 256 Gene3D G3DSA:3.40.50.150 26 255 4.7E-57 T 13-10-2018 Y11_21171 227908794129cc9fd3fa0a40c2c3ba7f 256 Pfam PF08241 Methyltransferase domain 50 146 1.5E-25 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Y11_19221 e3a0d909ab2d70e6226ffa58efda3418 105 SUPERFAMILY SSF81301 4 105 3.76E-37 T 13-10-2018 Y11_19221 e3a0d909ab2d70e6226ffa58efda3418 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 2.3E-28 T 13-10-2018 Y11_19221 e3a0d909ab2d70e6226ffa58efda3418 105 Gene3D G3DSA:3.30.460.10 2 105 2.4E-36 T 13-10-2018 Y11_19221 e3a0d909ab2d70e6226ffa58efda3418 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 5.1E-38 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Y11_19221 e3a0d909ab2d70e6226ffa58efda3418 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.947 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Y11_16351 6f526d780ceefaa8f844a824bf237ca6 265 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 216 3.6E-41 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Y11_16351 6f526d780ceefaa8f844a824bf237ca6 265 Gene3D G3DSA:3.40.1010.10 2 119 1.9E-37 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Y11_16351 6f526d780ceefaa8f844a824bf237ca6 265 SUPERFAMILY SSF53790 2 239 1.96E-73 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Y11_16351 6f526d780ceefaa8f844a824bf237ca6 265 Gene3D G3DSA:3.30.950.10 120 254 1.8E-45 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Y11_16351 6f526d780ceefaa8f844a824bf237ca6 265 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_16351 6f526d780ceefaa8f844a824bf237ca6 265 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 239 3.9E-91 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_16351 6f526d780ceefaa8f844a824bf237ca6 265 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_19291 5f9a00292e478b16680c215d32d86b38 228 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 79 132 5.0E-21 T 13-10-2018 Y11_19291 5f9a00292e478b16680c215d32d86b38 228 Gene3D G3DSA:3.30.930.10 4 208 3.0E-61 T 13-10-2018 Y11_19291 5f9a00292e478b16680c215d32d86b38 228 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 75 90 - T 13-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Y11_19291 5f9a00292e478b16680c215d32d86b38 228 Hamap MF_00013 Octanoyltransferase [lipB]. 9 210 36.742 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Y11_19291 5f9a00292e478b16680c215d32d86b38 228 Pfam PF03099 Biotin/lipoate A/B protein ligase family 66 163 2.3E-6 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Y11_19291 5f9a00292e478b16680c215d32d86b38 228 SUPERFAMILY SSF55681 6 209 1.16E-68 T 13-10-2018 Y11_19291 5f9a00292e478b16680c215d32d86b38 228 PIRSF PIRSF016262 5 218 7.4E-56 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Y11_19291 5f9a00292e478b16680c215d32d86b38 228 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 34 207 7.9E-72 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Y11_43211 d1d143046be5fe98079cf53225c510cb 120 SUPERFAMILY SSF141530 3 119 1.03E-37 T 13-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 Y11_43211 d1d143046be5fe98079cf53225c510cb 120 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 118 6.0E-35 T 13-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 Y11_43211 d1d143046be5fe98079cf53225c510cb 120 Gene3D G3DSA:2.40.33.40 1 120 2.6E-29 T 13-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 Y11_43211 d1d143046be5fe98079cf53225c510cb 120 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 115 2.7E-38 T 13-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 Y11_12571 5ed0cf602e211821889540c4859003e4 207 Pfam PF03550 Outer membrane lipoprotein LolB 51 204 1.1E-46 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Y11_12571 5ed0cf602e211821889540c4859003e4 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 7 205 6.0E-76 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Y11_12571 5ed0cf602e211821889540c4859003e4 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 206 30.184 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Y11_12571 5ed0cf602e211821889540c4859003e4 207 Gene3D G3DSA:2.50.20.10 30 207 2.6E-61 T 13-10-2018 Y11_12571 5ed0cf602e211821889540c4859003e4 207 SUPERFAMILY SSF89392 21 206 1.22E-56 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Y11_39181 e0eadb97ebf39f127e81aa637b38e04f 206 Pfam PF01121 Dephospho-CoA kinase 3 177 4.2E-73 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Y11_39181 e0eadb97ebf39f127e81aa637b38e04f 206 Gene3D G3DSA:3.40.50.300 1 205 9.6E-68 T 13-10-2018 Y11_39181 e0eadb97ebf39f127e81aa637b38e04f 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 178 1.2E-62 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Y11_39181 e0eadb97ebf39f127e81aa637b38e04f 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 27.593 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Y11_39181 e0eadb97ebf39f127e81aa637b38e04f 206 SUPERFAMILY SSF52540 1 187 1.55E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_24371 57047023f4cc6a7ce1fa5f64cf005cdc 151 SUPERFAMILY SSF140566 15 140 3.14E-23 T 13-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 Y11_24371 57047023f4cc6a7ce1fa5f64cf005cdc 151 Gene3D G3DSA:1.20.58.300 13 142 4.4E-17 T 13-10-2018 Y11_24371 57047023f4cc6a7ce1fa5f64cf005cdc 151 Pfam PF05130 FlgN protein 16 140 1.5E-15 T 13-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 Y11_14091 eabd523e214da2362b4191e2390449e7 120 Hamap MF_01180 Flagellar protein FliT [fliT]. 1 120 25.971 T 13-10-2018 IPR008622 Flagellar protein FliT Y11_14091 eabd523e214da2362b4191e2390449e7 120 Pfam PF05400 Flagellar protein FliT 21 106 1.7E-20 T 13-10-2018 IPR008622 Flagellar protein FliT Y11_14091 eabd523e214da2362b4191e2390449e7 120 Gene3D G3DSA:1.20.58.380 2 110 1.3E-34 T 13-10-2018 Y11_34291 3af9e1ecd9a186d8375fc4fc05609c66 113 Gene3D G3DSA:2.150.10.10 1 105 1.0E-10 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_34291 3af9e1ecd9a186d8375fc4fc05609c66 113 SUPERFAMILY SSF51120 3 87 6.54E-7 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_17861 7d0e16e5bc7e1d1e486a01f65224ce29 290 SUPERFAMILY SSF161098 88 274 3.66E-32 T 13-10-2018 IPR035906 MetI-like superfamily Y11_17861 7d0e16e5bc7e1d1e486a01f65224ce29 290 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 16 282 6.1E-83 T 13-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 Y11_17861 7d0e16e5bc7e1d1e486a01f65224ce29 290 Gene3D G3DSA:1.10.3720.10 87 284 1.3E-32 T 13-10-2018 IPR035906 MetI-like superfamily Y11_17861 7d0e16e5bc7e1d1e486a01f65224ce29 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 270 2.9E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 SUPERFAMILY SSF56712 1 608 1.22E-187 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 Gene3D G3DSA:1.10.460.10 162 602 1.5E-174 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 641 65.79 T 13-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 SMART SM00493 1 124 9.4E-32 T 13-10-2018 IPR006171 TOPRIM domain Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 Gene3D G3DSA:1.10.290.10 289 416 1.5E-174 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 3.3E-25 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 3.3E-25 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 3.3E-25 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 3.3E-25 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 3.3E-25 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 Pfam PF01131 DNA topoisomerase 158 593 1.4E-109 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 Gene3D G3DSA:3.40.50.140 1 156 3.8E-62 T 13-10-2018 Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 Pfam PF01751 Toprim domain 3 135 5.7E-18 T 13-10-2018 IPR006171 TOPRIM domain Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 634 5.8E-279 T 13-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 Gene3D G3DSA:2.70.20.10 217 488 1.5E-174 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 SMART SM00436 128 223 9.5E-36 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Y11_11191 9462f2d4fdaa4e198641b3f91de0ff60 641 SMART SM00437 280 558 3.6E-104 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Y11_12671 8209510668bbc34ddb51ba5d751bf4c0 218 Pfam PF04391 Protein of unknown function (DUF533) 32 209 3.7E-50 T 13-10-2018 IPR007486 Inner membrane protein YebE Y11_12671 8209510668bbc34ddb51ba5d751bf4c0 218 SUPERFAMILY SSF158682 69 210 5.75E-19 T 13-10-2018 IPR029024 TerB-like Y11_12671 8209510668bbc34ddb51ba5d751bf4c0 218 Gene3D G3DSA:1.10.3680.10 77 217 2.0E-10 T 13-10-2018 IPR029024 TerB-like Y11_37561 75f5ec0ba9f3ae9375c00269bbbb1b56 91 Gene3D G3DSA:3.40.50.1820 1 85 1.4E-21 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_34661 1c0f8facc56d91edca874311ff1a6a5e 88 Pfam PF02416 mttA/Hcf106 family 4 49 9.0E-13 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Y11_34661 1c0f8facc56d91edca874311ff1a6a5e 88 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 5.8E-21 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Y11_34661 1c0f8facc56d91edca874311ff1a6a5e 88 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 86 23.526 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Y11_42601 980b96291ab41bbe75a1be426495bdee 126 Pfam PF00874 PRD domain 28 110 2.2E-5 T 13-10-2018 IPR011608 PRD domain GO:0006355 Y11_42601 980b96291ab41bbe75a1be426495bdee 126 SUPERFAMILY SSF63520 19 115 2.35E-8 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 Y11_31171 538be1eb88049a85444dd5a0ab17e992 501 Pfam PF10995 GGDEF I-site like or GIL domain 142 453 2.1E-132 T 13-10-2018 IPR017745 BcsE, GIL domain GO:0035438 Y11_31171 538be1eb88049a85444dd5a0ab17e992 501 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 137 453 2.6E-111 T 13-10-2018 IPR017745 BcsE, GIL domain GO:0035438 Y11_39261 2182782082ed066495331eebb9a89eb7 454 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 13-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 Y11_39261 2182782082ed066495331eebb9a89eb7 454 Gene3D G3DSA:1.20.1740.10 10 454 1.8E-57 T 13-10-2018 Y11_39261 2182782082ed066495331eebb9a89eb7 454 PIRSF PIRSF006060 1 453 2.1E-71 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_39261 2182782082ed066495331eebb9a89eb7 454 Pfam PF00324 Amino acid permease 18 453 7.3E-118 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Y11_32071 f22064bdab8533794a5f4ba8d1f6f05d 74 Pfam PF04023 FeoA domain 7 63 1.2E-6 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Y11_32071 f22064bdab8533794a5f4ba8d1f6f05d 74 SUPERFAMILY SSF50037 5 70 2.17E-14 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal Y11_32071 f22064bdab8533794a5f4ba8d1f6f05d 74 Gene3D G3DSA:2.30.30.90 1 73 5.7E-28 T 13-10-2018 IPR038157 Ferrous iron transporter, core domain Y11_32071 f22064bdab8533794a5f4ba8d1f6f05d 74 SMART SM00899 1 72 1.1E-7 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Y11_05481 2fdd8702dccf0322c66095f88d93c576 337 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 328 46.984 T 13-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Y11_05481 2fdd8702dccf0322c66095f88d93c576 337 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 230 247 - T 13-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 Y11_05481 2fdd8702dccf0322c66095f88d93c576 337 SUPERFAMILY SSF51445 1 292 2.0E-84 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Y11_05481 2fdd8702dccf0322c66095f88d93c576 337 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 8 288 1.6E-94 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Y11_05481 2fdd8702dccf0322c66095f88d93c576 337 Gene3D G3DSA:3.20.20.300 1 337 9.9E-129 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Y11_03571 17630a9e796ecc1e5523f45c3087330d 223 SUPERFAMILY SSF51569 3 216 6.49E-79 T 13-10-2018 Y11_03571 17630a9e796ecc1e5523f45c3087330d 223 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 5 213 1.5E-83 T 13-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Y11_03571 17630a9e796ecc1e5523f45c3087330d 223 PIRSF PIRSF001357 2 222 1.5E-72 T 13-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Y11_03571 17630a9e796ecc1e5523f45c3087330d 223 Pfam PF01791 DeoC/LacD family aldolase 8 212 3.5E-17 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Y11_03571 17630a9e796ecc1e5523f45c3087330d 223 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 3 217 34.655 T 13-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 Y11_03571 17630a9e796ecc1e5523f45c3087330d 223 SMART SM01133 4 215 8.9E-94 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Y11_03571 17630a9e796ecc1e5523f45c3087330d 223 Gene3D G3DSA:3.20.20.70 1 221 6.3E-92 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_37221 1b6e946c299d3d0f76cd92ae818a10ca 279 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 10 55 3.2E-9 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Y11_37221 1b6e946c299d3d0f76cd92ae818a10ca 279 Gene3D G3DSA:1.10.3720.10 66 274 1.7E-23 T 13-10-2018 IPR035906 MetI-like superfamily Y11_37221 1b6e946c299d3d0f76cd92ae818a10ca 279 SUPERFAMILY SSF161098 73 258 1.57E-27 T 13-10-2018 IPR035906 MetI-like superfamily Y11_37221 1b6e946c299d3d0f76cd92ae818a10ca 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 276 1.5E-28 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_32211 db3aa26431ec75a04b412110bd78e58a 135 Pfam PF01479 S4 domain 11 57 1.4E-11 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32211 db3aa26431ec75a04b412110bd78e58a 135 SMART SM00363 11 72 5.8E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32211 db3aa26431ec75a04b412110bd78e58a 135 PIRSF PIRSF016821 8 135 1.6E-42 T 13-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 Y11_32211 db3aa26431ec75a04b412110bd78e58a 135 Gene3D G3DSA:3.10.290.10 3 110 2.7E-39 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Y11_32211 db3aa26431ec75a04b412110bd78e58a 135 SUPERFAMILY SSF55174 10 106 6.41E-31 T 13-10-2018 Y11_05311 316c7f545a826906c46c2ec471f975a0 274 Gene3D G3DSA:3.30.470.10 1 108 4.9E-28 T 13-10-2018 Y11_05311 316c7f545a826906c46c2ec471f975a0 274 Pfam PF01063 Amino-transferase class IV 24 247 2.1E-48 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Y11_05311 316c7f545a826906c46c2ec471f975a0 274 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Y11_05311 316c7f545a826906c46c2ec471f975a0 274 SUPERFAMILY SSF56752 1 251 3.79E-66 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Y11_05311 316c7f545a826906c46c2ec471f975a0 274 Gene3D G3DSA:3.20.10.10 121 271 4.1E-48 T 13-10-2018 Y11_05311 316c7f545a826906c46c2ec471f975a0 274 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 268 2.2E-110 T 13-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 Y11_09431 7f626adcaf5ce75c44d0266f626a7bb7 176 Gene3D G3DSA:1.10.3290.10 1 93 8.0E-24 T 13-10-2018 IPR036597 Fido-like domain superfamily Y11_09431 7f626adcaf5ce75c44d0266f626a7bb7 176 Pfam PF02661 Fic/DOC family 1 30 1.1E-10 T 13-10-2018 IPR003812 Fido domain Y11_09431 7f626adcaf5ce75c44d0266f626a7bb7 176 SUPERFAMILY SSF140931 1 92 3.14E-24 T 13-10-2018 IPR036597 Fido-like domain superfamily Y11_30711 cc4bb7308d88b6ff2d1d786849ddc156 502 Pfam PF00665 Integrase core domain 132 254 4.0E-15 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_30711 cc4bb7308d88b6ff2d1d786849ddc156 502 SUPERFAMILY SSF53098 155 277 5.61E-5 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_30711 cc4bb7308d88b6ff2d1d786849ddc156 502 Gene3D G3DSA:1.10.10.60 7 41 6.2E-6 T 13-10-2018 Y11_17371 071c92c1151c90b93193e681983f7c01 470 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 146 1.6E-5 T 13-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Y11_17371 071c92c1151c90b93193e681983f7c01 470 SUPERFAMILY SSF53092 26 144 6.28E-6 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Y11_17371 071c92c1151c90b93193e681983f7c01 470 SUPERFAMILY SSF55920 199 404 1.7E-15 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like Y11_17371 071c92c1151c90b93193e681983f7c01 470 Gene3D G3DSA:3.40.350.10 19 156 1.9E-6 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Y11_17371 071c92c1151c90b93193e681983f7c01 470 Gene3D G3DSA:3.90.230.10 195 410 3.0E-11 T 13-10-2018 Y11_18211 74f5f526f2cb1be1ec33b6210b0b17c4 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 1.5E-65 T 13-10-2018 IPR000150 Cof family GO:0016787 Y11_18211 74f5f526f2cb1be1ec33b6210b0b17c4 273 Gene3D G3DSA:3.40.50.1000 4 267 5.4E-61 T 13-10-2018 IPR023214 HAD superfamily Y11_18211 74f5f526f2cb1be1ec33b6210b0b17c4 273 Gene3D G3DSA:3.30.1240.10 84 196 5.4E-61 T 13-10-2018 Y11_18211 74f5f526f2cb1be1ec33b6210b0b17c4 273 SUPERFAMILY SSF56784 1 271 5.3E-66 T 13-10-2018 IPR036412 HAD-like superfamily Y11_18211 74f5f526f2cb1be1ec33b6210b0b17c4 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 240 2.1E-22 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Y11_18211 74f5f526f2cb1be1ec33b6210b0b17c4 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 13-10-2018 Y11_18211 74f5f526f2cb1be1ec33b6210b0b17c4 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 1.1E-61 T 13-10-2018 Y11_18211 74f5f526f2cb1be1ec33b6210b0b17c4 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 244 256 7.4E-6 T 13-10-2018 Y11_18211 74f5f526f2cb1be1ec33b6210b0b17c4 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 221 240 7.4E-6 T 13-10-2018 Y11_18211 74f5f526f2cb1be1ec33b6210b0b17c4 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 7 21 7.4E-6 T 13-10-2018 Y11_28991 b31d147bd3502cfe0257594b6e39b0fc 365 Pfam PF02441 Flavoprotein 1 140 1.2E-28 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Y11_28991 b31d147bd3502cfe0257594b6e39b0fc 365 SUPERFAMILY SSF102645 146 361 1.7E-80 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Y11_28991 b31d147bd3502cfe0257594b6e39b0fc 365 Gene3D G3DSA:3.40.50.1950 1 147 5.5E-37 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Y11_28991 b31d147bd3502cfe0257594b6e39b0fc 365 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 149 330 3.4E-75 T 13-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Y11_28991 b31d147bd3502cfe0257594b6e39b0fc 365 SUPERFAMILY SSF52507 1 141 1.06E-41 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Y11_28991 b31d147bd3502cfe0257594b6e39b0fc 365 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 1 356 5.5E-143 T 13-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Y11_28991 b31d147bd3502cfe0257594b6e39b0fc 365 Gene3D G3DSA:3.40.50.10300 148 365 7.7E-88 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Y11_03091 f385ade76b433dbf613ece173f670ec0 233 Pfam PF01569 PAP2 superfamily 110 200 3.0E-8 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Y11_03091 f385ade76b433dbf613ece173f670ec0 233 Gene3D G3DSA:1.20.144.10 121 227 2.0E-10 T 13-10-2018 Y11_03091 f385ade76b433dbf613ece173f670ec0 233 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 2 233 42.059 T 13-10-2018 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 Y11_03091 f385ade76b433dbf613ece173f670ec0 233 SMART SM00014 95 210 2.0E-11 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Y11_03091 f385ade76b433dbf613ece173f670ec0 233 SUPERFAMILY SSF48317 23 220 1.57E-21 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Y11_10711 1d8712a796a6b9aa8ff6ce606cc89a4d 349 SMART SM00363 35 106 1.1E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_10711 1d8712a796a6b9aa8ff6ce606cc89a4d 349 Pfam PF00849 RNA pseudouridylate synthase 101 231 3.2E-17 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_10711 1d8712a796a6b9aa8ff6ce606cc89a4d 349 Pfam PF01479 S4 domain 36 76 2.5E-11 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_10711 1d8712a796a6b9aa8ff6ce606cc89a4d 349 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 105 265 1.1E-63 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Y11_10711 1d8712a796a6b9aa8ff6ce606cc89a4d 349 Gene3D G3DSA:3.30.2350.10 95 283 7.3E-54 T 13-10-2018 Y11_10711 1d8712a796a6b9aa8ff6ce606cc89a4d 349 SUPERFAMILY SSF55120 101 265 6.17E-45 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_10711 1d8712a796a6b9aa8ff6ce606cc89a4d 349 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 139 153 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Y11_10711 1d8712a796a6b9aa8ff6ce606cc89a4d 349 Gene3D G3DSA:3.10.290.10 31 93 3.4E-20 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Y11_10711 1d8712a796a6b9aa8ff6ce606cc89a4d 349 SUPERFAMILY SSF55174 36 130 2.65E-13 T 13-10-2018 Y11_02721 294cc1a588c5428967ca093ab9fb77cd 121 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 86 101 1.1E-16 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_02721 294cc1a588c5428967ca093ab9fb77cd 121 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 101 121 1.1E-16 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_02721 294cc1a588c5428967ca093ab9fb77cd 121 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 19 43 1.1E-16 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_02721 294cc1a588c5428967ca093ab9fb77cd 121 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 43 66 1.1E-16 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Y11_02721 294cc1a588c5428967ca093ab9fb77cd 121 Pfam PF00529 HlyD membrane-fusion protein of T1SS 19 97 1.4E-7 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Y11_02721 294cc1a588c5428967ca093ab9fb77cd 121 ProSitePatterns PS00543 HlyD family secretion proteins signature. 86 108 - T 13-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 Y11_02721 294cc1a588c5428967ca093ab9fb77cd 121 Gene3D G3DSA:2.40.30.170 2 104 1.6E-11 T 13-10-2018 Y11_15531 3ba77845b4475373e6cfcf94e613bceb 269 Gene3D G3DSA:3.40.50.1000 3 263 1.9E-66 T 13-10-2018 IPR023214 HAD superfamily Y11_15531 3ba77845b4475373e6cfcf94e613bceb 269 SUPERFAMILY SSF56784 1 266 5.31E-63 T 13-10-2018 IPR036412 HAD-like superfamily Y11_15531 3ba77845b4475373e6cfcf94e613bceb 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 263 1.7E-53 T 13-10-2018 IPR000150 Cof family GO:0016787 Y11_15531 3ba77845b4475373e6cfcf94e613bceb 269 Gene3D G3DSA:3.30.1240.10 86 192 1.9E-66 T 13-10-2018 Y11_15531 3ba77845b4475373e6cfcf94e613bceb 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 236 2.8E-21 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Y11_15531 3ba77845b4475373e6cfcf94e613bceb 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 13-10-2018 Y11_15531 3ba77845b4475373e6cfcf94e613bceb 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 263 2.1E-59 T 13-10-2018 Y11_14991 d4b5a4dd0765f424a904c8285d8eab1d 129 SUPERFAMILY SSF53822 37 104 7.5E-9 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_14991 d4b5a4dd0765f424a904c8285d8eab1d 129 Gene3D G3DSA:3.40.50.2300 37 117 2.9E-8 T 13-10-2018 Y11_16841 f9430d9daa43a8347d1d7c24e645f4c3 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 35.024 T 13-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Y11_16841 f9430d9daa43a8347d1d7c24e645f4c3 193 Gene3D G3DSA:2.70.40.10 1 162 3.9E-52 T 13-10-2018 IPR036157 dUTPase-like superfamily Y11_16841 f9430d9daa43a8347d1d7c24e645f4c3 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.9E-70 T 13-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Y11_16841 f9430d9daa43a8347d1d7c24e645f4c3 193 SUPERFAMILY SSF51283 1 193 1.31E-61 T 13-10-2018 IPR036157 dUTPase-like superfamily Y11_16841 f9430d9daa43a8347d1d7c24e645f4c3 193 Pfam PF00692 dUTPase 79 185 1.5E-10 T 13-10-2018 IPR029054 dUTPase-like Y11_40371 98295eaf83ec5a013c26065103e1e950 117 Pfam PF08334 Type II secretion system (T2SS), protein G 1 105 1.1E-30 T 13-10-2018 IPR013545 Type II secretion system protein G Y11_40371 98295eaf83ec5a013c26065103e1e950 117 Gene3D G3DSA:3.30.700.10 1 100 3.5E-30 T 13-10-2018 Y11_40371 98295eaf83ec5a013c26065103e1e950 117 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 1 105 2.8E-36 T 13-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 Y11_40371 98295eaf83ec5a013c26065103e1e950 117 SUPERFAMILY SSF54523 3 105 5.76E-33 T 13-10-2018 Y11_06171 93ee65ec9a5820e4e6e38da9d7bc8119 204 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 57 201 5.1E-69 T 13-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP Y11_06171 93ee65ec9a5820e4e6e38da9d7bc8119 204 SUPERFAMILY SSF56925 46 204 5.26E-78 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Y11_06171 93ee65ec9a5820e4e6e38da9d7bc8119 204 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 3 204 41.673 T 13-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP Y11_06171 93ee65ec9a5820e4e6e38da9d7bc8119 204 Gene3D G3DSA:2.40.160.20 44 204 1.5E-71 T 13-10-2018 Y11_06171 93ee65ec9a5820e4e6e38da9d7bc8119 204 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 56 192 1.0E-62 T 13-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP Y11_25201 dc15cb4d50b4c6c8fddb7ed523f88889 171 Pfam PF04985 Phage tail tube protein FII 4 170 1.1E-65 T 13-10-2018 IPR006498 Tail tube protein Y11_25201 dc15cb4d50b4c6c8fddb7ed523f88889 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 170 1.5E-51 T 13-10-2018 IPR006498 Tail tube protein Y11_13451 dc15cb4d50b4c6c8fddb7ed523f88889 171 Pfam PF04985 Phage tail tube protein FII 4 170 1.1E-65 T 13-10-2018 IPR006498 Tail tube protein Y11_13451 dc15cb4d50b4c6c8fddb7ed523f88889 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 170 1.5E-51 T 13-10-2018 IPR006498 Tail tube protein Y11_32801 c3f3bcebb5a0f93aa26d8d29bf8c63d3 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 28.081 T 13-10-2018 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 Y11_32801 c3f3bcebb5a0f93aa26d8d29bf8c63d3 95 Pfam PF04077 DsrH like protein 7 92 3.0E-27 T 13-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 Y11_32801 c3f3bcebb5a0f93aa26d8d29bf8c63d3 95 Gene3D G3DSA:3.40.1260.10 1 95 2.0E-28 T 13-10-2018 IPR027396 DsrEFH-like Y11_32801 c3f3bcebb5a0f93aa26d8d29bf8c63d3 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 4.3E-29 T 13-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 Y11_32801 c3f3bcebb5a0f93aa26d8d29bf8c63d3 95 SUPERFAMILY SSF75169 1 95 5.0E-29 T 13-10-2018 IPR027396 DsrEFH-like Y11_34421 eb14d8d2b2dfd7f3e05b6a1c6ec2d533 162 Gene3D G3DSA:2.60.40.2040 20 161 4.7E-12 T 13-10-2018 Y11_34421 eb14d8d2b2dfd7f3e05b6a1c6ec2d533 162 Pfam PF04449 CS1 type fimbrial major subunit 27 158 6.3E-17 T 13-10-2018 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 Y11_15861 6f5248eabda89a78cee06a23bcf89b2f 152 SUPERFAMILY SSF46894 75 140 6.46E-14 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_15861 6f5248eabda89a78cee06a23bcf89b2f 152 Gene3D G3DSA:1.10.10.10 72 144 4.8E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_15861 6f5248eabda89a78cee06a23bcf89b2f 152 SMART SM00421 79 136 3.6E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_15861 6f5248eabda89a78cee06a23bcf89b2f 152 Pfam PF00196 Bacterial regulatory proteins, luxR family 81 136 1.5E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_15861 6f5248eabda89a78cee06a23bcf89b2f 152 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 112 124 9.4E-7 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_15861 6f5248eabda89a78cee06a23bcf89b2f 152 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 96 112 9.4E-7 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_15861 6f5248eabda89a78cee06a23bcf89b2f 152 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 82 96 9.4E-7 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_32241 86c98ad321af678dcf10e67501a2df3d 335 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 332 7.7E-144 T 13-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 Y11_32241 86c98ad321af678dcf10e67501a2df3d 335 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 22 332 7.0E-149 T 13-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 Y11_31711 b29fb8dfbc308be6e2969dbe112b3ba5 337 Gene3D G3DSA:3.30.360.10 144 266 6.2E-106 T 13-10-2018 Y11_31711 b29fb8dfbc308be6e2969dbe112b3ba5 337 Gene3D G3DSA:3.40.50.720 4 318 6.2E-106 T 13-10-2018 Y11_31711 b29fb8dfbc308be6e2969dbe112b3ba5 337 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 125 2.4E-26 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Y11_31711 b29fb8dfbc308be6e2969dbe112b3ba5 337 SUPERFAMILY SSF51735 3 154 8.62E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_31711 b29fb8dfbc308be6e2969dbe112b3ba5 337 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 1 336 50.529 T 13-10-2018 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 Y11_31711 b29fb8dfbc308be6e2969dbe112b3ba5 337 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 239 2.2E-10 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Y11_31711 b29fb8dfbc308be6e2969dbe112b3ba5 337 SUPERFAMILY SSF55347 133 292 3.66E-17 T 13-10-2018 Y11_21781 64e31bfc1112c1cab52d2deae09b2628 113 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 105 4.4E-16 T 13-10-2018 IPR008407 Branched-chain amino acid transport, AzlD Y11_03151 7cda025aa731a759911cbb30eff4c935 396 SUPERFAMILY SSF51658 1 383 4.1E-79 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily Y11_03151 7cda025aa731a759911cbb30eff4c935 396 PIRSF PIRSF016049 1 392 7.7E-180 T 13-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Y11_03151 7cda025aa731a759911cbb30eff4c935 396 Gene3D G3DSA:3.20.20.150 1 391 5.0E-146 T 13-10-2018 Y11_03151 7cda025aa731a759911cbb30eff4c935 396 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 396 225.464 T 13-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Y11_03151 7cda025aa731a759911cbb30eff4c935 396 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 392 5.8E-213 T 13-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Y11_03151 7cda025aa731a759911cbb30eff4c935 396 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 1.1E-156 T 13-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Y11_23601 2a544adbff538abd709bba00c9face60 435 PIRSF PIRSF006060 1 432 2.4E-50 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_23601 2a544adbff538abd709bba00c9face60 435 Pfam PF13520 Amino acid permease 2 396 6.5E-51 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_23601 2a544adbff538abd709bba00c9face60 435 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 1 425 4.6E-242 T 13-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 Y11_23601 2a544adbff538abd709bba00c9face60 435 Gene3D G3DSA:1.20.1740.10 1 433 1.7E-61 T 13-10-2018 Y11_23601 2a544adbff538abd709bba00c9face60 435 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 422 3.1E-144 T 13-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 Y11_23601 2a544adbff538abd709bba00c9face60 435 Hamap MF_02073 Putrescine transporter PotE [potE]. 1 428 36.515 T 13-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 Y11_35251 f1803c3af926bb6fbef7381f39854a0e 152 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 14 145 3.2E-35 T 13-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD Y11_35251 f1803c3af926bb6fbef7381f39854a0e 152 Gene3D G3DSA:1.25.40.10 6 150 1.9E-38 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_35251 f1803c3af926bb6fbef7381f39854a0e 152 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 65 87 9.8E-9 T 13-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD Y11_35251 f1803c3af926bb6fbef7381f39854a0e 152 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 97 119 9.8E-9 T 13-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD Y11_35251 f1803c3af926bb6fbef7381f39854a0e 152 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 16 39 9.8E-9 T 13-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD Y11_35251 f1803c3af926bb6fbef7381f39854a0e 152 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 41 60 9.8E-9 T 13-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD Y11_35251 f1803c3af926bb6fbef7381f39854a0e 152 SUPERFAMILY SSF48452 19 125 8.28E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_35251 f1803c3af926bb6fbef7381f39854a0e 152 PIRSF PIRSF003165 2 151 2.5E-45 T 13-10-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup Y11_13481 ff043d690a401524404e4dfc8f1f9504 809 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 200 549 2.9E-88 T 13-10-2018 IPR010090 Phage tail tape measure protein Y11_13481 ff043d690a401524404e4dfc8f1f9504 809 Pfam PF10145 Phage-related minor tail protein 240 440 5.9E-49 T 13-10-2018 IPR010090 Phage tail tape measure protein Y11_p0591 d16c4a48d7c24f5c47ff23b3527d6368 115 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 77 112 1.7E-16 T 13-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 Y11_p0591 d16c4a48d7c24f5c47ff23b3527d6368 115 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 29 113 1.2E-20 T 13-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 Y11_p0171 297feb4d889199b4fe330c4d644f1ce6 120 Pfam PF09013 YopH, N-terminal 42 111 1.8E-9 T 13-10-2018 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal GO:0004725|GO:0006470|GO:0009405 Y11_p0171 297feb4d889199b4fe330c4d644f1ce6 120 Gene3D G3DSA:3.30.1570.10 2 117 5.0E-22 T 13-10-2018 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily Y11_p0171 297feb4d889199b4fe330c4d644f1ce6 120 SUPERFAMILY SSF64449 5 114 5.1E-47 T 13-10-2018 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily Y11_15801 31347addba8417ea23e27986c4f46c18 327 SUPERFAMILY SSF49401 192 325 8.28E-15 T 13-10-2018 IPR008966 Adhesion domain superfamily Y11_15801 31347addba8417ea23e27986c4f46c18 327 Gene3D G3DSA:2.60.40.3310 23 193 2.4E-6 T 13-10-2018 Y11_15801 31347addba8417ea23e27986c4f46c18 327 Pfam PF00419 Fimbrial protein 187 326 2.0E-14 T 13-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 Y11_15801 31347addba8417ea23e27986c4f46c18 327 Gene3D G3DSA:2.60.40.1090 194 325 2.7E-7 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Y11_33931 f0509590c49369617ee6775f338f5194 303 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 95 1.1E-21 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Y11_33931 f0509590c49369617ee6775f338f5194 303 Gene3D G3DSA:1.10.443.10 116 292 6.9E-58 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Y11_33931 f0509590c49369617ee6775f338f5194 303 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 298 56.267 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Y11_33931 f0509590c49369617ee6775f338f5194 303 SUPERFAMILY SSF47823 10 102 4.9E-11 T 13-10-2018 Y11_33931 f0509590c49369617ee6775f338f5194 303 Gene3D G3DSA:1.10.150.130 9 103 4.3E-20 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Y11_33931 f0509590c49369617ee6775f338f5194 303 SUPERFAMILY SSF56349 113 296 4.71E-53 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Y11_33931 f0509590c49369617ee6775f338f5194 303 Pfam PF00589 Phage integrase family 117 284 6.5E-52 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Y11_33931 f0509590c49369617ee6775f338f5194 303 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 13 300 8.5E-109 T 13-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 Y11_24161 428065003e2ad7534c9891715954fcb6 433 SUPERFAMILY SSF64518 1 433 1.14E-50 T 13-10-2018 Y11_24161 428065003e2ad7534c9891715954fcb6 433 Gene3D G3DSA:2.170.280.10 185 323 5.8E-39 T 13-10-2018 Y11_24161 428065003e2ad7534c9891715954fcb6 433 PRINTS PR00207 Flagellin signature 37 54 8.2E-10 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Y11_24161 428065003e2ad7534c9891715954fcb6 433 PRINTS PR00207 Flagellin signature 76 95 8.2E-10 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Y11_24161 428065003e2ad7534c9891715954fcb6 433 PRINTS PR00207 Flagellin signature 111 134 8.2E-10 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Y11_24161 428065003e2ad7534c9891715954fcb6 433 Gene3D G3DSA:1.20.1330.10 45 184 5.8E-39 T 13-10-2018 Y11_24161 428065003e2ad7534c9891715954fcb6 433 Gene3D G3DSA:1.20.58.1830 5 33 5.8E-39 T 13-10-2018 Y11_24161 428065003e2ad7534c9891715954fcb6 433 Gene3D G3DSA:2.30.220.10 199 292 5.8E-39 T 13-10-2018 Y11_24161 428065003e2ad7534c9891715954fcb6 433 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 6.4E-24 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Y11_24161 428065003e2ad7534c9891715954fcb6 433 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 350 359 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Y11_24161 428065003e2ad7534c9891715954fcb6 433 Pfam PF00700 Bacterial flagellin C-terminal helical region 349 432 1.6E-7 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Y11_43061 e4594d9513fe2929b833c3a66fd49219 169 Pfam PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase 14 165 7.3E-38 T 13-10-2018 IPR024651 FAD-containing D-sorbitol dehydrogenase small subunit Y11_21261 b364e5ad31775101711be9f1f77cf80e 419 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 418 40.811 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Y11_21261 b364e5ad31775101711be9f1f77cf80e 419 Pfam PF00171 Aldehyde dehydrogenase family 5 282 6.1E-14 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Y11_21261 b364e5ad31775101711be9f1f77cf80e 419 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 325 346 - T 13-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Y11_21261 b364e5ad31775101711be9f1f77cf80e 419 PIRSF PIRSF000151 1 419 2.9E-171 T 13-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Y11_21261 b364e5ad31775101711be9f1f77cf80e 419 SUPERFAMILY SSF53720 3 414 6.28E-112 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Y11_21261 b364e5ad31775101711be9f1f77cf80e 419 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 408 1.2E-184 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Y11_21261 b364e5ad31775101711be9f1f77cf80e 419 Gene3D G3DSA:3.40.605.10 16 413 1.1E-159 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Y11_21261 b364e5ad31775101711be9f1f77cf80e 419 Gene3D G3DSA:3.40.309.10 224 376 1.1E-159 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Y11_01231 216237a537e44e0ebfe42d7e23f63466 485 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Y11_01231 216237a537e44e0ebfe42d7e23f63466 485 Gene3D G3DSA:3.30.1360.60 1 78 4.2E-24 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_01231 216237a537e44e0ebfe42d7e23f63466 485 Pfam PF00367 phosphotransferase system, EIIB 10 43 5.0E-14 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Y11_01231 216237a537e44e0ebfe42d7e23f63466 485 SUPERFAMILY SSF55604 9 82 9.81E-22 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_01231 216237a537e44e0ebfe42d7e23f63466 485 Pfam PF02378 Phosphotransferase system, EIIC 114 397 2.4E-40 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Y11_09811 b4d7ff98e8782be96fa247f50ec5fd1f 123 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 1 123 31.359 T 13-10-2018 IPR009700 Protein of unknown function DUF1283 Y11_09811 b4d7ff98e8782be96fa247f50ec5fd1f 123 Pfam PF06932 Protein of unknown function (DUF1283) 41 123 1.3E-39 T 13-10-2018 IPR009700 Protein of unknown function DUF1283 Y11_09811 b4d7ff98e8782be96fa247f50ec5fd1f 123 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 36 123 1.0E-40 T 13-10-2018 IPR009700 Protein of unknown function DUF1283 Y11_05751 15ef97657f672f722d3786022c4ccf29 54 Gene3D G3DSA:3.40.718.10 1 54 3.4E-15 T 13-10-2018 Y11_05751 15ef97657f672f722d3786022c4ccf29 54 SUPERFAMILY SSF53659 1 54 1.37E-13 T 13-10-2018 Y11_05751 15ef97657f672f722d3786022c4ccf29 54 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 1 50 2.4E-9 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Y11_16041 5e9ca314b8c18e97613615069fb21df1 351 Gene3D G3DSA:3.40.50.11220 6 129 2.7E-30 T 13-10-2018 Y11_16041 5e9ca314b8c18e97613615069fb21df1 351 SUPERFAMILY SSF159672 6 238 1.28E-58 T 13-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Y11_16041 5e9ca314b8c18e97613615069fb21df1 351 Pfam PF01890 Cobalamin synthesis G C-terminus 231 346 6.9E-23 T 13-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 Y11_16041 5e9ca314b8c18e97613615069fb21df1 351 Gene3D G3DSA:3.30.420.180 222 350 4.0E-30 T 13-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 Y11_16041 5e9ca314b8c18e97613615069fb21df1 351 SUPERFAMILY SSF159664 225 349 1.96E-31 T 13-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 Y11_16041 5e9ca314b8c18e97613615069fb21df1 351 Pfam PF11760 Cobalamin synthesis G N-terminal 54 134 7.6E-35 T 13-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Y11_16041 5e9ca314b8c18e97613615069fb21df1 351 Pfam PF11761 Cobalamin biosynthesis central region 140 215 9.2E-8 T 13-10-2018 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Y11_07601 548a53983df6cd94c4d346e34ba91b1b 278 SUPERFAMILY SSF51182 1 262 6.67E-106 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_07601 548a53983df6cd94c4d346e34ba91b1b 278 Pfam PF04962 KduI/IolB family 69 272 6.0E-35 T 13-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Y11_07601 548a53983df6cd94c4d346e34ba91b1b 278 PIRSF PIRSF006625 1 278 4.4E-136 T 13-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Y11_07601 548a53983df6cd94c4d346e34ba91b1b 278 Gene3D G3DSA:2.60.120.10 10 264 3.3E-121 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_07601 548a53983df6cd94c4d346e34ba91b1b 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 55.885 T 13-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Y11_07601 548a53983df6cd94c4d346e34ba91b1b 278 Gene3D G3DSA:2.60.120.520 30 144 3.3E-121 T 13-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Y11_32381 781b152c255d3c6e046b87643e0a2e5c 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 192 5.7E-37 T 13-10-2018 Y11_32381 781b152c255d3c6e046b87643e0a2e5c 232 Gene3D G3DSA:1.10.150.240 22 92 3.5E-65 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Y11_32381 781b152c255d3c6e046b87643e0a2e5c 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 192 4.0E-11 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_32381 781b152c255d3c6e046b87643e0a2e5c 232 Gene3D G3DSA:3.40.50.1000 10 215 3.5E-65 T 13-10-2018 IPR023214 HAD superfamily Y11_32381 781b152c255d3c6e046b87643e0a2e5c 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 108 187 1.0E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_32381 781b152c255d3c6e046b87643e0a2e5c 232 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 223 37.306 T 13-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Y11_32381 781b152c255d3c6e046b87643e0a2e5c 232 SUPERFAMILY SSF56784 5 222 5.09E-59 T 13-10-2018 IPR036412 HAD-like superfamily Y11_32381 781b152c255d3c6e046b87643e0a2e5c 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 1.2E-11 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_32381 781b152c255d3c6e046b87643e0a2e5c 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.2E-11 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_32381 781b152c255d3c6e046b87643e0a2e5c 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.2E-11 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_32381 781b152c255d3c6e046b87643e0a2e5c 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 1.2E-11 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_32381 781b152c255d3c6e046b87643e0a2e5c 232 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 220 1.0E-81 T 13-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Y11_25161 3331d039dc53514f9f64569e301a33ec 114 Pfam PF06995 Phage P2 GpU 6 106 4.9E-35 T 13-10-2018 IPR009734 Myoviridae, GpU Y11_25161 3331d039dc53514f9f64569e301a33ec 114 PIRSF PIRSF029208 1 111 1.4E-43 T 13-10-2018 IPR016912 Bacteriophage P2, GpU Y11_06191 ceefbbd9430d4ace10d2237f36e53217 239 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 38 193 5.5E-42 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Y11_06191 ceefbbd9430d4ace10d2237f36e53217 239 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 35 192 3.9E-44 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Y11_06191 ceefbbd9430d4ace10d2237f36e53217 239 SUPERFAMILY SSF64438 23 194 5.13E-46 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Y11_06191 ceefbbd9430d4ace10d2237f36e53217 239 Gene3D G3DSA:3.60.140.10 20 219 4.5E-48 T 13-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Y11_31271 74569401369e799c8f695a14932a5285 572 Gene3D G3DSA:2.30.30.880 69 562 0.0 T 13-10-2018 Y11_31271 74569401369e799c8f695a14932a5285 572 PIRSF PIRSF001432 1 565 4.1E-276 T 13-10-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 Y11_31271 74569401369e799c8f695a14932a5285 572 Gene3D G3DSA:1.50.10.20 27 527 0.0 T 13-10-2018 Y11_31271 74569401369e799c8f695a14932a5285 572 Gene3D G3DSA:2.20.25.430 281 397 0.0 T 13-10-2018 Y11_31271 74569401369e799c8f695a14932a5285 572 Pfam PF06917 Periplasmic pectate lyase 18 572 0.0 T 13-10-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 Y11_01151 784c28338100ae760d2c4fe7edefd702 313 Pfam PF02470 MlaD protein 48 114 6.3E-11 T 13-10-2018 IPR003399 Mce/MlaD Y11_16291 4db9132c15475411b29368d0a68a9d67 371 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 362 9.5E-109 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Y11_16291 4db9132c15475411b29368d0a68a9d67 371 Gene3D G3DSA:3.40.50.1970 1 165 1.8E-44 T 13-10-2018 Y11_16291 4db9132c15475411b29368d0a68a9d67 371 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 154 182 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Y11_16291 4db9132c15475411b29368d0a68a9d67 371 SUPERFAMILY SSF56796 2 369 6.02E-107 T 13-10-2018 Y11_16291 4db9132c15475411b29368d0a68a9d67 371 Gene3D G3DSA:1.20.1090.10 167 371 6.0E-64 T 13-10-2018 Y11_40311 f79e74de7f062529df602058e76a1378 150 Gene3D G3DSA:2.30.30.830 86 149 4.4E-15 T 13-10-2018 Y11_40311 f79e74de7f062529df602058e76a1378 150 Pfam PF11356 Type II secretion system protein C 64 147 1.7E-13 T 13-10-2018 IPR024961 Type II secretion system protein C, N-terminal Y11_18321 d54c9a4dee24c3834cebe6b21f17e06e 362 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 359 6.4E-64 T 13-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Y11_18321 d54c9a4dee24c3834cebe6b21f17e06e 362 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 13-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Y11_18321 d54c9a4dee24c3834cebe6b21f17e06e 362 Gene3D G3DSA:3.30.428.10 176 361 8.2E-69 T 13-10-2018 IPR036265 HIT-like superfamily Y11_18321 d54c9a4dee24c3834cebe6b21f17e06e 362 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 4 176 5.7E-72 T 13-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Y11_18321 d54c9a4dee24c3834cebe6b21f17e06e 362 SUPERFAMILY SSF54197 4 177 8.88E-74 T 13-10-2018 IPR036265 HIT-like superfamily Y11_18321 d54c9a4dee24c3834cebe6b21f17e06e 362 Gene3D G3DSA:3.30.428.10 44 175 8.3E-59 T 13-10-2018 IPR036265 HIT-like superfamily Y11_18321 d54c9a4dee24c3834cebe6b21f17e06e 362 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 360 2.2E-198 T 13-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Y11_18321 d54c9a4dee24c3834cebe6b21f17e06e 362 SUPERFAMILY SSF54197 179 358 1.53E-52 T 13-10-2018 IPR036265 HIT-like superfamily Y11_18321 d54c9a4dee24c3834cebe6b21f17e06e 362 PIRSF PIRSF000808 1 354 6.3E-123 T 13-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Y11_05861 68101ae41e66f75960306caf41bb8bc1 62 Gene3D G3DSA:3.60.60.10 8 61 3.0E-7 T 13-10-2018 Y11_40921 e5e533f36a88c7544dbfc38f263de62d 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 452 6.7E-57 T 13-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 Y11_40921 e5e533f36a88c7544dbfc38f263de62d 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 1.4E-46 T 13-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 Y11_40921 e5e533f36a88c7544dbfc38f263de62d 454 Gene3D G3DSA:3.40.50.450 124 452 3.5E-122 T 13-10-2018 Y11_40921 e5e533f36a88c7544dbfc38f263de62d 454 Pfam PF03641 Possible lysine decarboxylase 190 329 3.9E-33 T 13-10-2018 IPR031100 LOG family Y11_40921 e5e533f36a88c7544dbfc38f263de62d 454 Gene3D G3DSA:3.30.1850.10 1 120 3.8E-52 T 13-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 Y11_40921 e5e533f36a88c7544dbfc38f263de62d 454 SUPERFAMILY SSF102405 120 330 5.34E-42 T 13-10-2018 Y11_06691 9f1dc9b4ab9eb1b343622861db828033 361 Gene3D G3DSA:1.20.1250.20 1 167 9.4E-16 T 13-10-2018 Y11_06691 9f1dc9b4ab9eb1b343622861db828033 361 Gene3D G3DSA:1.20.1250.20 171 356 2.0E-20 T 13-10-2018 Y11_06691 9f1dc9b4ab9eb1b343622861db828033 361 SUPERFAMILY SSF103473 2 356 6.93E-38 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_06691 9f1dc9b4ab9eb1b343622861db828033 361 Pfam PF07690 Major Facilitator Superfamily 5 215 3.9E-13 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_14151 c6597e30d316f547afd11c17781b2078 58 SUPERFAMILY SSF54857 2 57 7.98E-16 T 13-10-2018 IPR036687 DinI-like superfamily Y11_14151 c6597e30d316f547afd11c17781b2078 58 Pfam PF06183 DinI-like family 2 56 3.4E-21 T 13-10-2018 IPR010391 DNA damage-inducible protein DinI-like Y11_14151 c6597e30d316f547afd11c17781b2078 58 Gene3D G3DSA:3.30.910.10 1 58 4.0E-20 T 13-10-2018 IPR036687 DinI-like superfamily Y11_42451 b368df46374f7bd18d60745331f6f0b3 349 Pfam PF09925 Predicted membrane protein (DUF2157) 18 167 2.0E-6 T 13-10-2018 IPR018677 Domain of unknown function DUF2157 Y11_21231 78d6abe326255f7ff6224475f08382c8 440 SUPERFAMILY SSF51735 4 164 3.28E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_21231 78d6abe326255f7ff6224475f08382c8 440 Gene3D G3DSA:3.40.50.720 1 166 1.0E-55 T 13-10-2018 Y11_21231 78d6abe326255f7ff6224475f08382c8 440 Pfam PF02056 Family 4 glycosyl hydrolase 6 184 1.5E-60 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Y11_21231 78d6abe326255f7ff6224475f08382c8 440 SUPERFAMILY SSF56327 168 437 9.24E-86 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Y11_21231 78d6abe326255f7ff6224475f08382c8 440 Gene3D G3DSA:3.90.110.10 167 439 9.4E-97 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Y11_21231 78d6abe326255f7ff6224475f08382c8 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 195 415 9.3E-51 T 13-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 Y11_21231 78d6abe326255f7ff6224475f08382c8 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 138 155 3.9E-48 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Y11_21231 78d6abe326255f7ff6224475f08382c8 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 3.9E-48 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Y11_21231 78d6abe326255f7ff6224475f08382c8 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 95 108 3.9E-48 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Y11_21231 78d6abe326255f7ff6224475f08382c8 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 3.9E-48 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Y11_21231 78d6abe326255f7ff6224475f08382c8 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 191 203 3.9E-48 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Y11_21231 78d6abe326255f7ff6224475f08382c8 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 3.9E-48 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Y11_21231 78d6abe326255f7ff6224475f08382c8 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 109 129 3.9E-48 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Y11_22871 47c5a75f8bd72576ee20622f0f2391c2 344 Pfam PF04389 Peptidase family M28 110 323 7.6E-25 T 13-10-2018 IPR007484 Peptidase M28 Y11_22871 47c5a75f8bd72576ee20622f0f2391c2 344 Gene3D G3DSA:3.40.630.10 24 344 2.3E-41 T 13-10-2018 Y11_22871 47c5a75f8bd72576ee20622f0f2391c2 344 SUPERFAMILY SSF53187 22 280 1.66E-32 T 13-10-2018 Y11_19071 935b146c394cbd169500ade734dbea24 357 Pfam PF02562 PhoH-like protein 124 327 4.8E-94 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 Y11_19071 935b146c394cbd169500ade734dbea24 357 SUPERFAMILY SSF52540 123 304 2.75E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_19071 935b146c394cbd169500ade734dbea24 357 Gene3D G3DSA:3.40.50.300 121 327 5.6E-74 T 13-10-2018 Y11_36301 bd1ca8afd26b240cc322b32ea80106d0 150 Gene3D G3DSA:3.10.430.100 61 149 2.1E-30 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Y11_36301 bd1ca8afd26b240cc322b32ea80106d0 150 SUPERFAMILY SSF55658 1 57 4.01E-19 T 13-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Y11_36301 bd1ca8afd26b240cc322b32ea80106d0 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 5.5E-22 T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36301 bd1ca8afd26b240cc322b32ea80106d0 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36301 bd1ca8afd26b240cc322b32ea80106d0 150 Gene3D G3DSA:3.40.5.10 1 50 5.1E-25 T 13-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36301 bd1ca8afd26b240cc322b32ea80106d0 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.154 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_36301 bd1ca8afd26b240cc322b32ea80106d0 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 4.5E-25 T 13-10-2018 IPR020069 Ribosomal protein L9, C-terminal Y11_36301 bd1ca8afd26b240cc322b32ea80106d0 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.1E-58 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_36301 bd1ca8afd26b240cc322b32ea80106d0 150 SUPERFAMILY SSF55653 61 149 2.88E-25 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Y11_05961 3cf81f246a25649b944f21f51ab5193f 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 287 1.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_05961 3cf81f246a25649b944f21f51ab5193f 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 271 1.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Y11_05961 3cf81f246a25649b944f21f51ab5193f 291 SUPERFAMILY SSF46689 190 238 3.32E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_05961 3cf81f246a25649b944f21f51ab5193f 291 Gene3D G3DSA:1.10.10.60 188 235 6.7E-15 T 13-10-2018 Y11_05961 3cf81f246a25649b944f21f51ab5193f 291 Gene3D G3DSA:1.10.10.60 236 290 1.6E-15 T 13-10-2018 Y11_05961 3cf81f246a25649b944f21f51ab5193f 291 Pfam PF12833 Helix-turn-helix domain 210 289 4.8E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_05961 3cf81f246a25649b944f21f51ab5193f 291 SMART SM00342 204 287 1.7E-27 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Y11_05961 3cf81f246a25649b944f21f51ab5193f 291 SUPERFAMILY SSF46689 241 289 1.08E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_21471 51ab6b84c1837ba2fc0267752b60b064 257 SUPERFAMILY SSF141523 45 163 1.57E-9 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Y11_21471 51ab6b84c1837ba2fc0267752b60b064 257 Pfam PF03734 L,D-transpeptidase catalytic domain 48 163 8.5E-8 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Y11_06921 bc7ef84479b352d71031e1149e5bc3c4 104 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 19 93 5.6E-8 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Y11_06921 bc7ef84479b352d71031e1149e5bc3c4 104 Gene3D G3DSA:1.10.760.10 10 103 6.0E-12 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Y11_06921 bc7ef84479b352d71031e1149e5bc3c4 104 SUPERFAMILY SSF46626 11 97 7.62E-14 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Y11_30281 5e79426bec7a091767c4f92ddf17826f 729 Pfam PF08964 Beta/Gamma crystallin 41 119 3.6E-9 T 13-10-2018 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal GO:0016020|GO:0098609 Y11_30281 5e79426bec7a091767c4f92ddf17826f 729 SUPERFAMILY SSF49695 39 126 6.22E-13 T 13-10-2018 IPR011024 Gamma-crystallin-like Y11_30281 5e79426bec7a091767c4f92ddf17826f 729 Gene3D G3DSA:2.60.20.10 35 128 8.1E-22 T 13-10-2018 Y11_12281 e8aa5cd3d4cae31baaef4d2ac9607f18 437 Pfam PF00155 Aminotransferase class I and II 106 416 8.1E-31 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_12281 e8aa5cd3d4cae31baaef4d2ac9607f18 437 Gene3D G3DSA:3.40.640.10 101 319 2.2E-101 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_12281 e8aa5cd3d4cae31baaef4d2ac9607f18 437 SUPERFAMILY SSF53383 20 425 1.35E-92 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_12281 e8aa5cd3d4cae31baaef4d2ac9607f18 437 Gene3D G3DSA:3.90.1150.10 56 424 2.2E-101 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_36111 a9e0fe7de63e8155ab0f540e11fda036 98 Gene3D G3DSA:3.40.50.300 1 98 8.1E-29 T 13-10-2018 Y11_36111 a9e0fe7de63e8155ab0f540e11fda036 98 Pfam PF01715 IPP transferase 2 74 1.7E-21 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Y11_01911 5617d1878d93c49bded6c0459eeae6a0 1627 PRINTS PR00313 NodO calcium binding signature 1540 1548 7.2E-5 T 13-10-2018 Y11_01911 5617d1878d93c49bded6c0459eeae6a0 1627 PRINTS PR00313 NodO calcium binding signature 1459 1470 7.2E-5 T 13-10-2018 Y11_01911 5617d1878d93c49bded6c0459eeae6a0 1627 PRINTS PR00313 NodO calcium binding signature 1531 1539 7.2E-5 T 13-10-2018 Y11_01911 5617d1878d93c49bded6c0459eeae6a0 1627 PRINTS PR00313 NodO calcium binding signature 1556 1565 7.2E-5 T 13-10-2018 Y11_01911 5617d1878d93c49bded6c0459eeae6a0 1627 SUPERFAMILY SSF51120 1411 1579 1.27E-8 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_01911 5617d1878d93c49bded6c0459eeae6a0 1627 Gene3D G3DSA:2.150.10.10 1439 1624 6.1E-15 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_04551 82435f2d008994b35765a81179267006 550 Pfam PF02470 MlaD protein 291 393 9.2E-13 T 13-10-2018 IPR003399 Mce/MlaD Y11_04551 82435f2d008994b35765a81179267006 550 Pfam PF02470 MlaD protein 162 220 5.4E-6 T 13-10-2018 IPR003399 Mce/MlaD Y11_04551 82435f2d008994b35765a81179267006 550 Pfam PF02470 MlaD protein 45 136 6.3E-12 T 13-10-2018 IPR003399 Mce/MlaD Y11_02981 86f6f09d1b7d28159ba3ead620f90b03 95 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 95 26.061 T 13-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Y11_02981 86f6f09d1b7d28159ba3ead620f90b03 95 SUPERFAMILY SSF50715 1 95 6.28E-27 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Y11_02981 86f6f09d1b7d28159ba3ead620f90b03 95 Gene3D G3DSA:2.40.240.10 1 95 4.0E-31 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Y11_02981 86f6f09d1b7d28159ba3ead620f90b03 95 Pfam PF01386 Ribosomal L25p family 4 92 2.6E-22 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Y11_02981 86f6f09d1b7d28159ba3ead620f90b03 95 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 8 95 2.0E-41 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Y11_13221 4e43b1255dd44f7eb70cca7e2f958de8 310 Pfam PF04860 Phage portal protein 61 304 1.1E-15 T 13-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein Y11_13221 4e43b1255dd44f7eb70cca7e2f958de8 310 PIRSF PIRSF018494 1 310 1.5E-150 T 13-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria Y11_13221 4e43b1255dd44f7eb70cca7e2f958de8 310 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 19 299 3.6E-87 T 13-10-2018 IPR006430 Phage portal protein PBSX family Y11_02271 3bdeb20f55c7326d225cc8026925b8ba 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 5.4E-135 T 13-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Y11_02271 3bdeb20f55c7326d225cc8026925b8ba 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.74 T 13-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Y11_02271 3bdeb20f55c7326d225cc8026925b8ba 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 8.6E-84 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_24721 3f8fdfb442396a00ea67f55805da82ba 336 Pfam PF01618 MotA/TolQ/ExbB proton channel family 186 298 7.1E-35 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Y11_24721 3f8fdfb442396a00ea67f55805da82ba 336 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 103 314 1.7E-94 T 13-10-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0016020|GO:0022857|GO:0055085 Y11_37871 9ef948ddfd89f9b14d6a4cb0f5822185 311 Pfam PF00294 pfkB family carbohydrate kinase 4 299 7.4E-71 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Y11_37871 9ef948ddfd89f9b14d6a4cb0f5822185 311 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 28 52 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Y11_37871 9ef948ddfd89f9b14d6a4cb0f5822185 311 SUPERFAMILY SSF53613 2 307 1.56E-80 T 13-10-2018 IPR029056 Ribokinase-like Y11_37871 9ef948ddfd89f9b14d6a4cb0f5822185 311 PRINTS PR00990 Ribokinase signature 176 191 1.2E-6 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Y11_37871 9ef948ddfd89f9b14d6a4cb0f5822185 311 PRINTS PR00990 Ribokinase signature 216 227 1.2E-6 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Y11_37871 9ef948ddfd89f9b14d6a4cb0f5822185 311 PRINTS PR00990 Ribokinase signature 23 42 1.2E-6 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Y11_37871 9ef948ddfd89f9b14d6a4cb0f5822185 311 Gene3D G3DSA:3.40.1190.20 1 311 1.1E-96 T 13-10-2018 IPR029056 Ribokinase-like Y11_37871 9ef948ddfd89f9b14d6a4cb0f5822185 311 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Y11_16941 f058c74715f8e6a565868974de247cfe 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 4 226 1.4E-99 T 13-10-2018 IPR005261 Conserved hypothetical protein CHP00659 Y11_16941 f058c74715f8e6a565868974de247cfe 231 Pfam PF04172 LrgB-like family 12 223 5.5E-78 T 13-10-2018 IPR007300 CidB/LrgB family Y11_31911 582ea74dab6c435dcfadf7b2fe25d163 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.1E-24 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_31911 582ea74dab6c435dcfadf7b2fe25d163 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Y11_31911 582ea74dab6c435dcfadf7b2fe25d163 252 SMART SM01134 72 233 2.1E-71 T 13-10-2018 Y11_31911 582ea74dab6c435dcfadf7b2fe25d163 252 SUPERFAMILY SSF100950 74 234 1.07E-29 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_31911 582ea74dab6c435dcfadf7b2fe25d163 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 9.9E-54 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain Y11_31911 582ea74dab6c435dcfadf7b2fe25d163 252 SMART SM00420 6 58 5.2E-27 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_31911 582ea74dab6c435dcfadf7b2fe25d163 252 Gene3D G3DSA:1.10.10.10 1 58 2.0E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_31911 582ea74dab6c435dcfadf7b2fe25d163 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.7E-12 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_31911 582ea74dab6c435dcfadf7b2fe25d163 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.7E-12 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_31911 582ea74dab6c435dcfadf7b2fe25d163 252 Gene3D G3DSA:3.30.750.70 70 133 3.9E-10 T 13-10-2018 Y11_31911 582ea74dab6c435dcfadf7b2fe25d163 252 SUPERFAMILY SSF46785 3 73 1.62E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_12711 98b9e3a137c1b24fcdf6cd8b47e17b75 138 Pfam PF06530 Phage antitermination protein Q 15 136 2.0E-43 T 13-10-2018 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 Y11_34361 d692bf5fc7b24ad12cbb04115236dc6c 233 Gene3D G3DSA:3.40.50.300 1 233 2.1E-65 T 13-10-2018 Y11_34361 d692bf5fc7b24ad12cbb04115236dc6c 233 Pfam PF00005 ABC transporter 17 161 9.8E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_34361 d692bf5fc7b24ad12cbb04115236dc6c 233 PIRSF PIRSF039137 1 233 8.2E-102 T 13-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 Y11_34361 d692bf5fc7b24ad12cbb04115236dc6c 233 SUPERFAMILY SSF52540 2 230 3.3E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_34361 d692bf5fc7b24ad12cbb04115236dc6c 233 SMART SM00382 26 212 5.0E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_34361 d692bf5fc7b24ad12cbb04115236dc6c 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_09441 786a85aa4ba6fd1592408319dc7a29a1 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_09441 786a85aa4ba6fd1592408319dc7a29a1 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_09441 786a85aa4ba6fd1592408319dc7a29a1 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_09441 786a85aa4ba6fd1592408319dc7a29a1 284 SUPERFAMILY SSF46785 2 85 1.25E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_09441 786a85aa4ba6fd1592408319dc7a29a1 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.5E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_09441 786a85aa4ba6fd1592408319dc7a29a1 284 Pfam PF03466 LysR substrate binding domain 88 267 8.4E-23 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_09441 786a85aa4ba6fd1592408319dc7a29a1 284 Gene3D G3DSA:3.40.190.10 93 280 1.9E-30 T 13-10-2018 Y11_09441 786a85aa4ba6fd1592408319dc7a29a1 284 Gene3D G3DSA:3.40.190.10 161 260 1.9E-30 T 13-10-2018 Y11_09441 786a85aa4ba6fd1592408319dc7a29a1 284 Gene3D G3DSA:1.10.10.10 1 91 3.2E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_09441 786a85aa4ba6fd1592408319dc7a29a1 284 SUPERFAMILY SSF53850 88 281 3.26E-22 T 13-10-2018 Y11_04411 47eb5d1f86abb44545255afe58ffa209 244 Pfam PF00753 Metallo-beta-lactamase superfamily 39 221 1.3E-31 T 13-10-2018 IPR001279 Metallo-beta-lactamase Y11_04411 47eb5d1f86abb44545255afe58ffa209 244 SMART SM00849 41 221 8.2E-43 T 13-10-2018 IPR001279 Metallo-beta-lactamase Y11_04411 47eb5d1f86abb44545255afe58ffa209 244 SUPERFAMILY SSF56281 29 238 4.19E-61 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_04411 47eb5d1f86abb44545255afe58ffa209 244 Gene3D G3DSA:3.60.15.10 30 239 7.9E-86 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_35811 dcf93a039c94c24b9cc3d654a310af5f 70 Pfam PF02595 Glycerate kinase family 3 42 4.7E-9 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 Y11_35811 dcf93a039c94c24b9cc3d654a310af5f 70 Gene3D G3DSA:3.40.50.10350 1 50 7.8E-14 T 13-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold Y11_35811 dcf93a039c94c24b9cc3d654a310af5f 70 SUPERFAMILY SSF110738 1 43 1.26E-12 T 13-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 Y11_27231 ded5716c09fc318b761e1f155f1f244d 484 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site Y11_27231 ded5716c09fc318b761e1f155f1f244d 484 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 9.3E-109 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Y11_27231 ded5716c09fc318b761e1f155f1f244d 484 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 472 2.9E-241 T 13-10-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0036376 Y11_27231 ded5716c09fc318b761e1f155f1f244d 484 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site Y11_27231 ded5716c09fc318b761e1f155f1f244d 484 Gene3D G3DSA:1.20.1730.10 25 481 2.1E-84 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily Y11_27231 ded5716c09fc318b761e1f155f1f244d 484 Pfam PF00474 Sodium:solute symporter family 36 432 8.3E-132 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Y11_12811 8afc520e1ef069b0d41b44d3f9d4a2ed 131 Gene3D G3DSA:3.30.1380.10 7 124 5.1E-25 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Y11_12811 8afc520e1ef069b0d41b44d3f9d4a2ed 131 SUPERFAMILY SSF55166 7 125 1.61E-31 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Y11_12811 8afc520e1ef069b0d41b44d3f9d4a2ed 131 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 58 124 6.0E-19 T 13-10-2018 IPR039561 Peptidase M15C GO:0008233 Y11_31781 fdf884286a70699f5ff1bb9576be7a1d 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 191 9.6E-31 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Y11_31781 fdf884286a70699f5ff1bb9576be7a1d 197 Pfam PF01914 MarC family integral membrane protein 2 193 2.5E-58 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Y11_25001 fd598d8b7bc0b961edf5a449f5331cb5 435 Pfam PF01928 CYTH domain 4 196 2.7E-32 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Y11_25001 fd598d8b7bc0b961edf5a449f5331cb5 435 SMART SM01118 2 202 5.0E-41 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Y11_25001 fd598d8b7bc0b961edf5a449f5331cb5 435 Gene3D G3DSA:2.40.320.10 1 200 2.8E-36 T 13-10-2018 Y11_25001 fd598d8b7bc0b961edf5a449f5331cb5 435 SUPERFAMILY SSF55154 1 218 2.29E-54 T 13-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 Y11_29801 8053fdc8bbf9558c07c681ffd0908b97 318 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 311 2.9E-93 T 13-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Y11_29801 8053fdc8bbf9558c07c681ffd0908b97 318 Gene3D G3DSA:1.10.3720.10 70 316 1.1E-32 T 13-10-2018 IPR035906 MetI-like superfamily Y11_29801 8053fdc8bbf9558c07c681ffd0908b97 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 312 1.8E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_29801 8053fdc8bbf9558c07c681ffd0908b97 318 SUPERFAMILY SSF161098 27 304 5.49E-34 T 13-10-2018 IPR035906 MetI-like superfamily Y11_35081 8d65bf34bbfb1d8cb96c87277f5d9842 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Y11_35081 8d65bf34bbfb1d8cb96c87277f5d9842 91 Gene3D G3DSA:4.10.520.10 1 90 2.8E-37 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Y11_35081 8d65bf34bbfb1d8cb96c87277f5d9842 91 SMART SM00411 1 90 7.6E-44 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_35081 8d65bf34bbfb1d8cb96c87277f5d9842 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.0E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_35081 8d65bf34bbfb1d8cb96c87277f5d9842 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.0E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_35081 8d65bf34bbfb1d8cb96c87277f5d9842 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.0E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_35081 8d65bf34bbfb1d8cb96c87277f5d9842 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 8.8E-33 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Y11_35081 8d65bf34bbfb1d8cb96c87277f5d9842 91 SUPERFAMILY SSF47729 1 90 5.0E-33 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Y11_40051 9cda1bc3fab539cb0b1f14d7869d6877 473 PIRSF PIRSF004548 1 454 7.5E-185 T 13-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD Y11_40051 9cda1bc3fab539cb0b1f14d7869d6877 473 Pfam PF06123 Inner membrane protein CreD 6 428 1.1E-150 T 13-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD Y11_11041 89668d5803de73d54e71257d4d44bdd7 136 SMART SM00528 88 136 7.4E-25 T 13-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 Y11_11041 89668d5803de73d54e71257d4d44bdd7 136 Gene3D G3DSA:1.10.287.1050 1 83 6.6E-37 T 13-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 Y11_11041 89668d5803de73d54e71257d4d44bdd7 136 SUPERFAMILY SSF81273 94 136 1.26E-12 T 13-10-2018 Y11_11041 89668d5803de73d54e71257d4d44bdd7 136 PIRSF PIRSF002096 1 136 7.4E-57 T 13-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 Y11_11041 89668d5803de73d54e71257d4d44bdd7 136 Pfam PF00816 H-NS histone family 32 128 3.7E-20 T 13-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 Y11_11041 89668d5803de73d54e71257d4d44bdd7 136 SUPERFAMILY SSF81273 2 58 4.32E-18 T 13-10-2018 Y11_11041 89668d5803de73d54e71257d4d44bdd7 136 Gene3D G3DSA:4.10.430.10 92 136 1.5E-25 T 13-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 Y11_17771 6f8758fed7c7252923d03a01406b9ad0 376 SUPERFAMILY SSF55347 135 309 1.18E-36 T 13-10-2018 Y11_17771 6f8758fed7c7252923d03a01406b9ad0 376 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 130 6.5E-25 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Y11_17771 6f8758fed7c7252923d03a01406b9ad0 376 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 265 1.2E-8 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Y11_17771 6f8758fed7c7252923d03a01406b9ad0 376 SUPERFAMILY SSF51735 3 158 7.39E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_17771 6f8758fed7c7252923d03a01406b9ad0 376 Gene3D G3DSA:3.30.360.10 136 375 3.7E-67 T 13-10-2018 Y11_17771 6f8758fed7c7252923d03a01406b9ad0 376 Gene3D G3DSA:3.40.50.720 1 133 1.8E-37 T 13-10-2018 Y11_19821 5459eaacf14a7c130fff2b82b5561dbb 269 Pfam PF01963 TraB family 31 265 3.1E-37 T 13-10-2018 IPR002816 Pheromone shutdown, TraB Y11_14411 25dc598f3d7474a26bfddf2cb94d4ad4 419 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Y11_14411 25dc598f3d7474a26bfddf2cb94d4ad4 419 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 341 418 1.2E-22 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Y11_14411 25dc598f3d7474a26bfddf2cb94d4ad4 419 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 401 1.2E-93 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Y11_14411 25dc598f3d7474a26bfddf2cb94d4ad4 419 Gene3D G3DSA:2.60.98.20 146 301 3.2E-35 T 13-10-2018 IPR037058 Flagellar hook protein FlgE superfamily Y11_14411 25dc598f3d7474a26bfddf2cb94d4ad4 419 SUPERFAMILY SSF117143 73 380 1.83E-76 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Y11_14411 25dc598f3d7474a26bfddf2cb94d4ad4 419 Pfam PF07559 Flagellar basal body protein FlaE 173 300 4.3E-18 T 13-10-2018 IPR011491 Flagellar hook protein FlgE Y11_14411 25dc598f3d7474a26bfddf2cb94d4ad4 419 Pfam PF00460 Flagella basal body rod protein 4 33 3.1E-11 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Y11_32941 e4854c3184f2f6bef7a38facf4b9e29c 232 SUPERFAMILY SSF54814 2 106 1.91E-37 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Y11_32941 e4854c3184f2f6bef7a38facf4b9e29c 232 Gene3D G3DSA:3.30.1140.32 108 208 3.9E-46 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32941 e4854c3184f2f6bef7a38facf4b9e29c 232 SMART SM00322 60 125 1.6E-6 T 13-10-2018 IPR004087 K Homology domain GO:0003676 Y11_32941 e4854c3184f2f6bef7a38facf4b9e29c 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 13-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32941 e4854c3184f2f6bef7a38facf4b9e29c 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.264 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Y11_32941 e4854c3184f2f6bef7a38facf4b9e29c 232 SUPERFAMILY SSF54821 108 206 6.93E-41 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32941 e4854c3184f2f6bef7a38facf4b9e29c 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.0E-41 T 13-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32941 e4854c3184f2f6bef7a38facf4b9e29c 232 Gene3D G3DSA:3.30.300.20 17 107 1.3E-29 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Y11_32941 e4854c3184f2f6bef7a38facf4b9e29c 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.3E-100 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Y11_32941 e4854c3184f2f6bef7a38facf4b9e29c 232 Pfam PF07650 KH domain 38 111 8.9E-19 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_31991 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 SUPERFAMILY SSF89360 1 97 4.71E-21 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Y11_31991 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 Gene3D G3DSA:3.30.300.130 106 191 1.3E-20 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Y11_31991 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 45.815 T 13-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 Y11_31991 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 2.3E-13 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Y11_31991 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 SUPERFAMILY SSF117916 95 184 1.11E-23 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Y11_31991 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 3.0E-27 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Y11_31991 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 Pfam PF01106 NifU-like domain 111 177 5.5E-20 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Y11_31991 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 Gene3D G3DSA:2.60.300.12 1 98 8.1E-13 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Y11_31991 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 5.9E-101 T 13-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 Y11_30641 d41ae691f7a79afee5b152a2b4e31fa5 102 Gene3D G3DSA:3.40.50.2300 1 94 9.2E-24 T 13-10-2018 Y11_05361 f0392a1d771641484af13014d4f608b5 477 SUPERFAMILY SSF55604 402 474 2.35E-20 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_05361 f0392a1d771641484af13014d4f608b5 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 1.5E-228 T 13-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 Y11_05361 f0392a1d771641484af13014d4f608b5 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 3.5E-25 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 Y11_05361 f0392a1d771641484af13014d4f608b5 477 Gene3D G3DSA:3.30.1360.60 397 477 4.5E-31 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_05361 f0392a1d771641484af13014d4f608b5 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Y11_05361 f0392a1d771641484af13014d4f608b5 477 Pfam PF00367 phosphotransferase system, EIIB 405 436 5.9E-14 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Y11_05361 f0392a1d771641484af13014d4f608b5 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 1.5E-83 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Y11_05361 f0392a1d771641484af13014d4f608b5 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 8.1E-88 T 13-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 Y11_00761 05c5ac8cb6f8503fd4bbf649eb826ed9 255 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 10 250 29.328 T 13-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 Y11_00761 05c5ac8cb6f8503fd4bbf649eb826ed9 255 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 16 232 2.1E-43 T 13-10-2018 Y11_01891 bd4465f1bb06079fb3fe1989098203ac 238 SUPERFAMILY SSF161098 17 214 1.31E-37 T 13-10-2018 IPR035906 MetI-like superfamily Y11_01891 bd4465f1bb06079fb3fe1989098203ac 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 219 1.1E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_01891 bd4465f1bb06079fb3fe1989098203ac 238 Gene3D G3DSA:1.10.3720.10 8 229 4.3E-43 T 13-10-2018 IPR035906 MetI-like superfamily Y11_01891 bd4465f1bb06079fb3fe1989098203ac 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 7.7E-14 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Y11_00531 e6933fa3ff9b8d61a42b8c06a59ba826 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 8.8E-7 T 13-10-2018 IPR002220 DapA-like GO:0016829 Y11_00531 e6933fa3ff9b8d61a42b8c06a59ba826 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 8.8E-7 T 13-10-2018 IPR002220 DapA-like GO:0016829 Y11_00531 e6933fa3ff9b8d61a42b8c06a59ba826 296 Gene3D G3DSA:3.20.20.70 1 296 2.7E-102 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_00531 e6933fa3ff9b8d61a42b8c06a59ba826 296 SMART SM01130 3 294 2.8E-69 T 13-10-2018 IPR002220 DapA-like GO:0016829 Y11_00531 e6933fa3ff9b8d61a42b8c06a59ba826 296 SUPERFAMILY SSF51569 1 292 2.83E-72 T 13-10-2018 Y11_00531 e6933fa3ff9b8d61a42b8c06a59ba826 296 Pfam PF00701 Dihydrodipicolinate synthetase family 4 289 2.3E-51 T 13-10-2018 IPR002220 DapA-like GO:0016829 Y11_00531 e6933fa3ff9b8d61a42b8c06a59ba826 296 PIRSF PIRSF001365 1 295 5.7E-66 T 13-10-2018 IPR002220 DapA-like GO:0016829 Y11_00531 e6933fa3ff9b8d61a42b8c06a59ba826 296 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 13-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Y11_36641 440270500cc89eb3ab6b4afef695a4ce 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 27.513 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Y11_36641 440270500cc89eb3ab6b4afef695a4ce 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 6.2E-95 T 13-10-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 Y11_36641 440270500cc89eb3ab6b4afef695a4ce 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 1.1E-58 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Y11_36641 440270500cc89eb3ab6b4afef695a4ce 209 PIRSF PIRSF005461 1 209 9.2E-82 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Y11_36641 440270500cc89eb3ab6b4afef695a4ce 209 SUPERFAMILY SSF53335 31 207 3.14E-43 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_36641 440270500cc89eb3ab6b4afef695a4ce 209 Gene3D G3DSA:3.40.50.150 30 208 2.3E-61 T 13-10-2018 Y11_31411 ad9b7fb5b711a36b8bbb3627cb57e0cf 680 Gene3D G3DSA:1.10.1370.40 13 675 2.9E-267 T 13-10-2018 Y11_31411 ad9b7fb5b711a36b8bbb3627cb57e0cf 680 Pfam PF01432 Peptidase family M3 222 677 4.3E-168 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Y11_31411 ad9b7fb5b711a36b8bbb3627cb57e0cf 680 Gene3D G3DSA:1.10.1370.10 140 610 2.9E-267 T 13-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Y11_31411 ad9b7fb5b711a36b8bbb3627cb57e0cf 680 SUPERFAMILY SSF55486 1 677 8.58E-214 T 13-10-2018 Y11_36061 3dc657fafd71a6f9242c9f161b6dd7aa 504 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 234 503 23.126 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Y11_36061 3dc657fafd71a6f9242c9f161b6dd7aa 504 SUPERFAMILY SSF64153 16 256 4.58E-59 T 13-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Y11_36061 3dc657fafd71a6f9242c9f161b6dd7aa 504 Gene3D G3DSA:3.40.50.10260 15 225 2.2E-53 T 13-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Y11_36061 3dc657fafd71a6f9242c9f161b6dd7aa 504 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 233 499 2.1E-78 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Y11_36061 3dc657fafd71a6f9242c9f161b6dd7aa 504 Pfam PF01256 Carbohydrate kinase 258 496 2.9E-68 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Y11_36061 3dc657fafd71a6f9242c9f161b6dd7aa 504 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 220 21.456 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Y11_36061 3dc657fafd71a6f9242c9f161b6dd7aa 504 Pfam PF03853 YjeF-related protein N-terminus 40 199 1.0E-40 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Y11_36061 3dc657fafd71a6f9242c9f161b6dd7aa 504 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 20 220 2.3E-48 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Y11_36061 3dc657fafd71a6f9242c9f161b6dd7aa 504 SUPERFAMILY SSF53613 233 499 4.04E-72 T 13-10-2018 IPR029056 Ribokinase-like Y11_36061 3dc657fafd71a6f9242c9f161b6dd7aa 504 PIRSF PIRSF017184 15 504 1.4E-142 T 13-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 Y11_36061 3dc657fafd71a6f9242c9f161b6dd7aa 504 Gene3D G3DSA:3.40.1190.20 227 499 4.7E-83 T 13-10-2018 IPR029056 Ribokinase-like Y11_23061 c20ded8f35eccf215ed53ff3a780609b 251 Gene3D G3DSA:3.30.110.170 37 238 2.5E-52 T 13-10-2018 Y11_23061 c20ded8f35eccf215ed53ff3a780609b 251 Gene3D G3DSA:3.30.70.2970 46 153 2.5E-52 T 13-10-2018 Y11_23061 c20ded8f35eccf215ed53ff3a780609b 251 Pfam PF04402 Protein of unknown function (DUF541) 36 237 4.5E-45 T 13-10-2018 IPR007497 Protein of unknown function DUF541 Y11_22481 ad817d2e18cf36e4cbb1a603412b3497 387 SUPERFAMILY SSF53383 38 379 7.48E-59 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_22481 ad817d2e18cf36e4cbb1a603412b3497 387 Gene3D G3DSA:3.90.1150.10 40 370 1.7E-104 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_22481 ad817d2e18cf36e4cbb1a603412b3497 387 Pfam PF00155 Aminotransferase class I and II 47 373 2.2E-38 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_22481 ad817d2e18cf36e4cbb1a603412b3497 387 Gene3D G3DSA:3.40.640.10 59 288 1.7E-104 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_00751 331de4fe810179bf6677b2eecbcdeafe 322 Gene3D G3DSA:3.40.50.1100 12 306 1.3E-125 T 13-10-2018 Y11_00751 331de4fe810179bf6677b2eecbcdeafe 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 2.5E-136 T 13-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Y11_00751 331de4fe810179bf6677b2eecbcdeafe 322 Gene3D G3DSA:3.40.50.1100 43 145 1.3E-125 T 13-10-2018 Y11_00751 331de4fe810179bf6677b2eecbcdeafe 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 1.1E-143 T 13-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Y11_00751 331de4fe810179bf6677b2eecbcdeafe 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Y11_00751 331de4fe810179bf6677b2eecbcdeafe 322 SUPERFAMILY SSF53686 3 316 6.42E-98 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y11_00751 331de4fe810179bf6677b2eecbcdeafe 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 1.4E-69 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Y11_15691 b0aa7f3f39600260fa464e9ccd07e9fc 498 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 492 1.4E-217 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Y11_15691 b0aa7f3f39600260fa464e9ccd07e9fc 498 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 67 492 4.2E-190 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Y11_05111 f9ab191a0b667f8f065f7541a2a8ae4a 350 SUPERFAMILY SSF52821 117 268 9.9E-32 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Y11_05111 f9ab191a0b667f8f065f7541a2a8ae4a 350 Pfam PF12368 Rhodanase C-terminal 246 308 1.4E-19 T 13-10-2018 IPR022111 Rhodanase, C-terminal Y11_05111 f9ab191a0b667f8f065f7541a2a8ae4a 350 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 38.75 T 13-10-2018 IPR020936 Uncharacterised protein family UPF0176 Y11_05111 f9ab191a0b667f8f065f7541a2a8ae4a 350 Gene3D G3DSA:3.40.250.10 124 271 6.4E-44 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Y11_05111 f9ab191a0b667f8f065f7541a2a8ae4a 350 Gene3D G3DSA:3.30.70.100 13 118 7.5E-14 T 13-10-2018 Y11_05111 f9ab191a0b667f8f065f7541a2a8ae4a 350 Pfam PF00581 Rhodanese-like domain 138 233 2.2E-15 T 13-10-2018 IPR001763 Rhodanese-like domain Y11_05111 f9ab191a0b667f8f065f7541a2a8ae4a 350 SMART SM00450 136 237 9.3E-27 T 13-10-2018 IPR001763 Rhodanese-like domain Y11_37451 c25f5cb0d2fd15f7a18f9b51504f9c3e 536 Pfam PF13091 PLD-like domain 395 501 2.1E-9 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Y11_37451 c25f5cb0d2fd15f7a18f9b51504f9c3e 536 Gene3D G3DSA:3.40.50.300 34 109 5.0E-7 T 13-10-2018 Y11_37451 c25f5cb0d2fd15f7a18f9b51504f9c3e 536 Gene3D G3DSA:3.30.870.10 384 529 1.5E-14 T 13-10-2018 Y11_37451 c25f5cb0d2fd15f7a18f9b51504f9c3e 536 Pfam PF13087 AAA domain 160 334 2.7E-21 T 13-10-2018 Y11_37451 c25f5cb0d2fd15f7a18f9b51504f9c3e 536 SUPERFAMILY SSF56024 389 526 3.45E-12 T 13-10-2018 Y11_37451 c25f5cb0d2fd15f7a18f9b51504f9c3e 536 Gene3D G3DSA:3.40.50.300 166 367 2.0E-31 T 13-10-2018 Y11_37451 c25f5cb0d2fd15f7a18f9b51504f9c3e 536 SUPERFAMILY SSF52540 51 384 4.18E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_31721 60b1b405f362f1ff3f357bf114e23f14 298 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 6 295 1.6E-119 T 13-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 Y11_31721 60b1b405f362f1ff3f357bf114e23f14 298 Pfam PF01261 Xylose isomerase-like TIM barrel 50 250 4.6E-25 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Y11_31721 60b1b405f362f1ff3f357bf114e23f14 298 Hamap MF_01672 Inosose dehydratase [iolE]. 1 298 56.148 T 13-10-2018 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 Y11_31721 60b1b405f362f1ff3f357bf114e23f14 298 Gene3D G3DSA:3.20.20.150 1 295 5.4E-80 T 13-10-2018 Y11_31721 60b1b405f362f1ff3f357bf114e23f14 298 SUPERFAMILY SSF51658 7 295 1.15E-56 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily Y11_11301 bb09a6ada95ee477256704dbe462c9b5 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 9.2E-137 T 13-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_11301 bb09a6ada95ee477256704dbe462c9b5 331 SUPERFAMILY SSF51735 3 166 1.74E-69 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_11301 bb09a6ada95ee477256704dbe462c9b5 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 6.1E-41 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_11301 bb09a6ada95ee477256704dbe462c9b5 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_11301 bb09a6ada95ee477256704dbe462c9b5 331 PIRSF PIRSF000149 1 331 1.5E-134 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_11301 bb09a6ada95ee477256704dbe462c9b5 331 SUPERFAMILY SSF55347 149 312 1.7E-80 T 13-10-2018 Y11_11301 bb09a6ada95ee477256704dbe462c9b5 331 Gene3D G3DSA:3.30.360.10 149 314 2.1E-158 T 13-10-2018 Y11_11301 bb09a6ada95ee477256704dbe462c9b5 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.3E-70 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_11301 bb09a6ada95ee477256704dbe462c9b5 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.1E-46 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_11301 bb09a6ada95ee477256704dbe462c9b5 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.1E-46 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_11301 bb09a6ada95ee477256704dbe462c9b5 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.1E-46 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_11301 bb09a6ada95ee477256704dbe462c9b5 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.1E-46 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_11301 bb09a6ada95ee477256704dbe462c9b5 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.1E-46 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_11301 bb09a6ada95ee477256704dbe462c9b5 331 Gene3D G3DSA:3.40.50.720 4 326 2.1E-158 T 13-10-2018 Y11_11301 bb09a6ada95ee477256704dbe462c9b5 331 SMART SM00846 3 150 1.7E-98 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Y11_19351 8cd0f5d6b1909721b782c193893b9a78 159 Pfam PF00313 'Cold-shock' DNA-binding domain 1 61 6.6E-10 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_19351 8cd0f5d6b1909721b782c193893b9a78 159 SUPERFAMILY SSF50249 2 62 1.05E-10 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_19351 8cd0f5d6b1909721b782c193893b9a78 159 Gene3D G3DSA:2.40.50.140 1 68 5.5E-18 T 13-10-2018 Y11_03191 0433516eeecd8218bc3a0236a8038a6e 84 Pfam PF03692 Putative zinc- or iron-chelating domain 2 59 3.9E-5 T 13-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Y11_07301 c43df2cad0f2c4ea071a93112afa6cd4 185 Pfam PF05229 Spore Coat Protein U domain 33 182 5.5E-30 T 13-10-2018 IPR007893 Spore coat protein U Y11_07301 c43df2cad0f2c4ea071a93112afa6cd4 185 SMART SM00972 122 182 4.2E-19 T 13-10-2018 IPR007893 Spore coat protein U Y11_25411 3ccb58ca8f723b821c78fb7d087af0e1 590 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 11 68 2.3E-23 T 13-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 Y11_25411 3ccb58ca8f723b821c78fb7d087af0e1 590 Gene3D G3DSA:3.30.420.240 398 571 3.8E-10 T 13-10-2018 Y11_25411 3ccb58ca8f723b821c78fb7d087af0e1 590 Pfam PF03237 Terminase-like family 162 383 1.8E-56 T 13-10-2018 IPR004921 Terminase large subunit, T4likevirus-type Y11_25411 3ccb58ca8f723b821c78fb7d087af0e1 590 Pfam PF17289 Terminase RNaseH-like domain 411 571 2.0E-39 T 13-10-2018 IPR035421 Terminase, large subunit gp17-like Y11_25411 3ccb58ca8f723b821c78fb7d087af0e1 590 Gene3D G3DSA:3.40.50.300 93 303 7.3E-22 T 13-10-2018 Y11_13241 3ccb58ca8f723b821c78fb7d087af0e1 590 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 11 68 2.3E-23 T 13-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 Y11_13241 3ccb58ca8f723b821c78fb7d087af0e1 590 Gene3D G3DSA:3.30.420.240 398 571 3.8E-10 T 13-10-2018 Y11_13241 3ccb58ca8f723b821c78fb7d087af0e1 590 Pfam PF03237 Terminase-like family 162 383 1.8E-56 T 13-10-2018 IPR004921 Terminase large subunit, T4likevirus-type Y11_13241 3ccb58ca8f723b821c78fb7d087af0e1 590 Pfam PF17289 Terminase RNaseH-like domain 411 571 2.0E-39 T 13-10-2018 IPR035421 Terminase, large subunit gp17-like Y11_13241 3ccb58ca8f723b821c78fb7d087af0e1 590 Gene3D G3DSA:3.40.50.300 93 303 7.3E-22 T 13-10-2018 Y11_24541 276479bf373f7240996bc8f39e1522ff 144 Gene3D G3DSA:1.20.1640.10 1 144 2.7E-44 T 13-10-2018 Y11_24541 276479bf373f7240996bc8f39e1522ff 144 Pfam PF00873 AcrB/AcrD/AcrF family 1 137 7.9E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Y11_24541 276479bf373f7240996bc8f39e1522ff 144 SUPERFAMILY SSF82866 1 141 4.97E-30 T 13-10-2018 Y11_12481 445d70307b1766e6f50bf04ba8f7c016 294 SUPERFAMILY SSF51695 21 293 4.19E-41 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Y11_12481 445d70307b1766e6f50bf04ba8f7c016 294 Gene3D G3DSA:3.20.20.190 13 294 9.9E-31 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Y11_12481 445d70307b1766e6f50bf04ba8f7c016 294 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 26 188 9.6E-15 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Y11_33631 3d030c8fbf6616b6c1bfdc5415da8a37 498 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 9 301 1.6E-93 T 13-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 Y11_33631 3d030c8fbf6616b6c1bfdc5415da8a37 498 SUPERFAMILY SSF53067 8 129 3.14E-38 T 13-10-2018 Y11_33631 3d030c8fbf6616b6c1bfdc5415da8a37 498 Pfam PF02541 Ppx/GppA phosphatase family 22 302 5.9E-97 T 13-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Y11_33631 3d030c8fbf6616b6c1bfdc5415da8a37 498 SUPERFAMILY SSF53067 133 301 1.65E-41 T 13-10-2018 Y11_33631 3d030c8fbf6616b6c1bfdc5415da8a37 498 Gene3D G3DSA:3.30.420.150 113 290 7.1E-88 T 13-10-2018 Y11_33631 3d030c8fbf6616b6c1bfdc5415da8a37 498 PIRSF PIRSF001267 1 497 1.9E-181 T 13-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 Y11_33631 3d030c8fbf6616b6c1bfdc5415da8a37 498 Gene3D G3DSA:3.30.420.40 10 298 7.1E-88 T 13-10-2018 Y11_33631 3d030c8fbf6616b6c1bfdc5415da8a37 498 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 3 495 54.12 T 13-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 Y11_33631 3d030c8fbf6616b6c1bfdc5415da8a37 498 SUPERFAMILY SSF109604 308 495 4.39E-45 T 13-10-2018 Y11_33631 3d030c8fbf6616b6c1bfdc5415da8a37 498 Gene3D G3DSA:1.10.3210.10 306 498 8.6E-50 T 13-10-2018 Y11_08051 5e99445fdfb8063c565195a7f47e052f 154 Gene3D G3DSA:3.90.1720.10 33 154 4.1E-38 T 13-10-2018 Y11_08051 5e99445fdfb8063c565195a7f47e052f 154 SUPERFAMILY SSF54001 33 154 3.19E-38 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Y11_08051 5e99445fdfb8063c565195a7f47e052f 154 Pfam PF00877 NlpC/P60 family 47 153 5.1E-28 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Y11_33731 8db18425783251becdd14c0203c4bd6d 245 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 244 6.2E-98 T 13-10-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 MetaCyc: PWY-7315 Y11_33731 8db18425783251becdd14c0203c4bd6d 245 Gene3D G3DSA:3.40.630.30 1 244 1.4E-68 T 13-10-2018 Y11_33731 8db18425783251becdd14c0203c4bd6d 245 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 244 45.733 T 13-10-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 MetaCyc: PWY-7315 Y11_33731 8db18425783251becdd14c0203c4bd6d 245 SUPERFAMILY SSF55729 45 238 3.49E-28 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_33731 8db18425783251becdd14c0203c4bd6d 245 Pfam PF00583 Acetyltransferase (GNAT) family 150 230 1.2E-14 T 13-10-2018 IPR000182 GNAT domain Y11_08521 bcec973f5178075e1645f7238c01fd25 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 101 189 2.3E-17 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal Y11_08521 bcec973f5178075e1645f7238c01fd25 202 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 5.0E-12 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Y11_08521 bcec973f5178075e1645f7238c01fd25 202 SUPERFAMILY SSF47616 84 199 1.53E-28 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Y11_08521 bcec973f5178075e1645f7238c01fd25 202 SUPERFAMILY SSF52833 1 79 2.2E-19 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_08521 bcec973f5178075e1645f7238c01fd25 202 Gene3D G3DSA:3.40.30.10 3 193 8.7E-78 T 13-10-2018 Y11_08521 bcec973f5178075e1645f7238c01fd25 202 Gene3D G3DSA:1.20.1050.10 82 188 8.7E-78 T 13-10-2018 Y11_33881 d2e0106a1e372faff0c3cc5a45ae4b46 847 Pfam PF01295 Adenylate cyclase, class-I 228 825 9.4E-263 T 13-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 Y11_33881 d2e0106a1e372faff0c3cc5a45ae4b46 847 PIRSF PIRSF001444 1 845 0.0 T 13-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 Y11_33881 d2e0106a1e372faff0c3cc5a45ae4b46 847 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 13-10-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 Y11_33881 d2e0106a1e372faff0c3cc5a45ae4b46 847 Pfam PF12633 Adenylate cyclase NT domain 5 200 1.9E-80 T 13-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 Y11_33881 d2e0106a1e372faff0c3cc5a45ae4b46 847 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 13-10-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 Y11_23761 099dca18a00b6a687dd0323129fa40b9 305 SUPERFAMILY SSF103481 210 299 1.57E-7 T 13-10-2018 Y11_23761 099dca18a00b6a687dd0323129fa40b9 305 Pfam PF00892 EamA-like transporter family 168 297 2.4E-10 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_23761 099dca18a00b6a687dd0323129fa40b9 305 Pfam PF00892 EamA-like transporter family 24 148 1.3E-13 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_23761 099dca18a00b6a687dd0323129fa40b9 305 SUPERFAMILY SSF103481 63 148 5.1E-7 T 13-10-2018 Y11_18171 1bd0e9c59ecf2b98ab088ca743b4f7ee 383 Gene3D G3DSA:3.40.640.10 57 283 1.0E-131 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_18171 1bd0e9c59ecf2b98ab088ca743b4f7ee 383 Gene3D G3DSA:3.90.1150.10 40 376 1.0E-131 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_18171 1bd0e9c59ecf2b98ab088ca743b4f7ee 383 Pfam PF00155 Aminotransferase class I and II 41 378 1.0E-62 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_18171 1bd0e9c59ecf2b98ab088ca743b4f7ee 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 382 48.755 T 13-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Y11_18171 1bd0e9c59ecf2b98ab088ca743b4f7ee 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Y11_18171 1bd0e9c59ecf2b98ab088ca743b4f7ee 383 SUPERFAMILY SSF53383 4 379 1.77E-103 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_18171 1bd0e9c59ecf2b98ab088ca743b4f7ee 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 379 1.4E-138 T 13-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Y11_31351 bf63c0120e15b2dda84a909c27f45b06 713 Pfam PF05170 AsmA family 1 606 8.1E-132 T 13-10-2018 IPR007844 AsmA Y11_19361 2938dac2b77c27a1c008f0a582262688 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 1.5E-5 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_19361 2938dac2b77c27a1c008f0a582262688 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 1.5E-5 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_19361 2938dac2b77c27a1c008f0a582262688 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 1.5E-5 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_19361 2938dac2b77c27a1c008f0a582262688 196 Gene3D G3DSA:1.10.10.10 98 195 1.5E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_19361 2938dac2b77c27a1c008f0a582262688 196 SUPERFAMILY SSF46894 132 193 4.08E-13 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_19361 2938dac2b77c27a1c008f0a582262688 196 SMART SM00421 136 193 8.0E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_19361 2938dac2b77c27a1c008f0a582262688 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 192 1.9E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_04391 e6d3297b33ca7337b99fee106c821b64 623 SUPERFAMILY SSF141523 383 541 4.58E-19 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Y11_04391 e6d3297b33ca7337b99fee106c821b64 623 SUPERFAMILY SSF47090 319 363 4.87E-11 T 13-10-2018 IPR036365 PGBD-like superfamily Y11_04391 e6d3297b33ca7337b99fee106c821b64 623 Pfam PF03734 L,D-transpeptidase catalytic domain 382 551 6.6E-30 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Y11_04391 e6d3297b33ca7337b99fee106c821b64 623 Pfam PF01471 Putative peptidoglycan binding domain 320 355 1.2E-7 T 13-10-2018 IPR002477 Peptidoglycan binding-like Y11_40941 d092daa30cfc7b39e49677e0536ac19a 183 Pfam PF07348 Syd protein (SUKH-2) 7 179 1.9E-71 T 13-10-2018 IPR009948 Syd GO:0009898 Y11_40941 d092daa30cfc7b39e49677e0536ac19a 183 Hamap MF_01104 Protein Syd [syd]. 3 181 36.337 T 13-10-2018 IPR009948 Syd GO:0009898 Y11_40941 d092daa30cfc7b39e49677e0536ac19a 183 Gene3D G3DSA:3.40.1580.20 1 181 1.0E-67 T 13-10-2018 IPR038228 Syd superfamily Y11_14431 8b45d36e808326bdf505359f2d458ec3 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 7.3E-50 T 13-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 Y11_14431 8b45d36e808326bdf505359f2d458ec3 134 Pfam PF00460 Flagella basal body rod protein 7 37 3.3E-9 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Y11_14431 8b45d36e808326bdf505359f2d458ec3 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 7.2E-11 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Y11_14431 8b45d36e808326bdf505359f2d458ec3 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Y11_39471 359751854a8d6b56bb2ce1f2cf6fccb8 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_39471 359751854a8d6b56bb2ce1f2cf6fccb8 308 SUPERFAMILY SSF52540 3 232 1.7E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_39471 359751854a8d6b56bb2ce1f2cf6fccb8 308 SMART SM00382 30 213 1.7E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_39471 359751854a8d6b56bb2ce1f2cf6fccb8 308 Gene3D G3DSA:3.40.50.300 1 236 1.1E-67 T 13-10-2018 Y11_39471 359751854a8d6b56bb2ce1f2cf6fccb8 308 Pfam PF00005 ABC transporter 21 165 3.6E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_04371 7c7fa598eb851160c51b7c3aac10329d 242 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 240 51.539 T 13-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 Y11_04371 7c7fa598eb851160c51b7c3aac10329d 242 Gene3D G3DSA:1.10.10.2250 1 78 6.1E-39 T 13-10-2018 Y11_04371 7c7fa598eb851160c51b7c3aac10329d 242 Gene3D G3DSA:1.10.10.2260 88 195 1.8E-53 T 13-10-2018 Y11_04371 7c7fa598eb851160c51b7c3aac10329d 242 Pfam PF04288 MukE-like family 10 227 4.0E-126 T 13-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 Y11_18711 5139705b3c2698e8ee6cfdfbbfba7d61 182 Gene3D G3DSA:2.40.100.10 86 155 1.6E-16 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily Y11_18711 5139705b3c2698e8ee6cfdfbbfba7d61 182 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 142 1.5E-32 T 13-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Y11_18711 5139705b3c2698e8ee6cfdfbbfba7d61 182 SMART SM00796 4 158 1.6E-21 T 13-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Y11_18711 5139705b3c2698e8ee6cfdfbbfba7d61 182 SUPERFAMILY SSF50891 88 155 4.55E-13 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily Y11_18711 5139705b3c2698e8ee6cfdfbbfba7d61 182 SUPERFAMILY SSF160467 5 92 1.7E-8 T 13-10-2018 Y11_18711 5139705b3c2698e8ee6cfdfbbfba7d61 182 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 139 2.5E-47 T 13-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Y11_34641 1f31f618c93b779cc7e29068acb50f31 217 Pfam PF02036 SCP-2 sterol transfer family 30 128 1.9E-20 T 13-10-2018 IPR003033 SCP2 sterol-binding domain Y11_34641 1f31f618c93b779cc7e29068acb50f31 217 SUPERFAMILY SSF55718 31 128 2.35E-8 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Y11_32771 eef14dfd289fac9566b9c5ffffeb099b 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 153 7.0E-63 T 13-10-2018 IPR013559 YheO-like Y11_32771 eef14dfd289fac9566b9c5ffffeb099b 240 Pfam PF08348 YheO-like PAS domain 29 137 1.1E-36 T 13-10-2018 IPR013559 YheO-like Y11_32771 eef14dfd289fac9566b9c5ffffeb099b 240 Pfam PF13309 HTH domain 171 228 3.2E-19 T 13-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain Y11_18821 26ef1d74d8b979ec53505126ae113dfd 212 Pfam PF02669 K+-transporting ATPase, c chain 17 198 1.8E-69 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Y11_18821 26ef1d74d8b979ec53505126ae113dfd 212 PIRSF PIRSF001296 12 204 9.3E-76 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Y11_18821 26ef1d74d8b979ec53505126ae113dfd 212 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 16 199 8.9E-72 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Y11_18821 26ef1d74d8b979ec53505126ae113dfd 212 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 13 200 33.717 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Y11_26211 272e3c51cd1e88f333c23de467ac78d5 241 Pfam PF00912 Transglycosylase 59 226 9.8E-51 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_26211 272e3c51cd1e88f333c23de467ac78d5 241 SUPERFAMILY SSF53955 52 231 1.72E-61 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Y11_26211 272e3c51cd1e88f333c23de467ac78d5 241 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 10 232 39.932 T 13-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_26211 272e3c51cd1e88f333c23de467ac78d5 241 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 17 230 9.0E-84 T 13-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_26211 272e3c51cd1e88f333c23de467ac78d5 241 Gene3D G3DSA:1.10.3810.10 53 239 2.2E-53 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_10661 ca0aee302155d51ddae57faf587da0f3 83 Gene3D G3DSA:1.10.1900.30 9 77 5.5E-39 T 13-10-2018 IPR038191 YciN superfamily Y11_10661 ca0aee302155d51ddae57faf587da0f3 83 Pfam PF10692 Protein of unknown function (DUF2498) 5 81 2.5E-44 T 13-10-2018 IPR019633 Protein of unknown function DUF2498 Y11_32981 9e3fed48ee66402aee55fea0a390cc77 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 13-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32981 9e3fed48ee66402aee55fea0a390cc77 104 Gene3D G3DSA:2.30.30.30 2 104 3.8E-40 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Y11_32981 9e3fed48ee66402aee55fea0a390cc77 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 8.0E-40 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_32981 9e3fed48ee66402aee55fea0a390cc77 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.052 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_32981 9e3fed48ee66402aee55fea0a390cc77 104 SUPERFAMILY SSF50104 4 100 9.03E-33 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Y11_32981 9e3fed48ee66402aee55fea0a390cc77 104 SMART SM00739 4 31 0.0014 T 13-10-2018 IPR005824 KOW Y11_32981 9e3fed48ee66402aee55fea0a390cc77 104 Pfam PF00467 KOW motif 8 32 7.7E-5 T 13-10-2018 IPR005824 KOW Y11_32981 9e3fed48ee66402aee55fea0a390cc77 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 4.2E-23 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_00121 1c92d38ace0059497e665ca5a7012058 668 Pfam PF17176 tRNA-binding domain 544 662 1.9E-44 T 13-10-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain Y11_00121 1c92d38ace0059497e665ca5a7012058 668 SUPERFAMILY SSF55729 381 520 7.65E-10 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_00121 1c92d38ace0059497e665ca5a7012058 668 Pfam PF05127 Helicase 195 341 9.1E-39 T 13-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 Y11_00121 1c92d38ace0059497e665ca5a7012058 668 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 16 659 50.962 T 13-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 Y11_00121 1c92d38ace0059497e665ca5a7012058 668 Pfam PF08351 Domain of unknown function (DUF1726) 64 149 3.9E-5 T 13-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 Y11_00121 1c92d38ace0059497e665ca5a7012058 668 Gene3D G3DSA:1.20.120.890 539 666 1.4E-47 T 13-10-2018 IPR038321 TmcA, C-terminal domain superfamily Y11_00121 1c92d38ace0059497e665ca5a7012058 668 Gene3D G3DSA:3.40.630.30 332 538 1.2E-70 T 13-10-2018 Y11_00121 1c92d38ace0059497e665ca5a7012058 668 Pfam PF13718 GNAT acetyltransferase 2 485 540 1.1E-6 T 13-10-2018 IPR000182 GNAT domain Y11_00121 1c92d38ace0059497e665ca5a7012058 668 Pfam PF13718 GNAT acetyltransferase 2 375 482 2.0E-11 T 13-10-2018 IPR000182 GNAT domain Y11_00121 1c92d38ace0059497e665ca5a7012058 668 Gene3D G3DSA:3.40.50.11040 3 190 2.3E-63 T 13-10-2018 Y11_00121 1c92d38ace0059497e665ca5a7012058 668 Gene3D G3DSA:3.40.50.12320 191 331 5.9E-49 T 13-10-2018 Y11_00121 1c92d38ace0059497e665ca5a7012058 668 SUPERFAMILY SSF52540 164 286 2.42E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_28851 ee9ce1bc7a0256c3329f27fa33774575 424 Pfam PF05231 MASE1 17 303 1.8E-15 T 13-10-2018 IPR007895 MASE1 Y11_28851 ee9ce1bc7a0256c3329f27fa33774575 424 Gene3D G3DSA:3.30.450.20 298 412 1.5E-7 T 13-10-2018 Y11_26751 8287437eabeda75f5ab1783134f31ea8 389 PIRSF PIRSF039004 1 387 4.4E-132 T 13-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 Y11_26751 8287437eabeda75f5ab1783134f31ea8 389 SUPERFAMILY SSF51556 63 328 9.48E-73 T 13-10-2018 IPR032466 Metal-dependent hydrolase Y11_26751 8287437eabeda75f5ab1783134f31ea8 389 TIGRFAM TIGR03583 EF_0837: putative amidohydrolase, EF_0837/AHA_3915 family 2 376 4.4E-165 T 13-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 Y11_26751 8287437eabeda75f5ab1783134f31ea8 389 Gene3D G3DSA:3.20.20.140 63 328 3.2E-119 T 13-10-2018 Y11_26751 8287437eabeda75f5ab1783134f31ea8 389 Gene3D G3DSA:2.30.40.10 6 373 3.2E-119 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_26751 8287437eabeda75f5ab1783134f31ea8 389 Pfam PF01979 Amidohydrolase family 60 359 2.5E-12 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Y11_26751 8287437eabeda75f5ab1783134f31ea8 389 SUPERFAMILY SSF51338 1 376 1.48E-17 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_42691 1d7bec69e8d9bcbfa1674eff700e9281 257 Pfam PF00588 SpoU rRNA Methylase family 5 154 3.0E-34 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Y11_42691 1d7bec69e8d9bcbfa1674eff700e9281 257 PIRSF PIRSF004808 1 246 1.9E-76 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Y11_42691 1d7bec69e8d9bcbfa1674eff700e9281 257 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 240 2.7E-87 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Y11_42691 1d7bec69e8d9bcbfa1674eff700e9281 257 Gene3D G3DSA:1.10.8.590 168 255 5.4E-33 T 13-10-2018 Y11_42691 1d7bec69e8d9bcbfa1674eff700e9281 257 SUPERFAMILY SSF75217 3 173 4.25E-39 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Y11_42691 1d7bec69e8d9bcbfa1674eff700e9281 257 Gene3D G3DSA:3.40.1280.10 1 164 5.8E-66 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Y11_40421 f26b8233dcd6262e3353c3ac2f06099c 261 Pfam PF05134 Type II secretion system (T2SS), protein L 14 236 6.9E-40 T 13-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain Y11_40421 f26b8233dcd6262e3353c3ac2f06099c 261 Gene3D G3DSA:3.30.420.370 149 214 6.6E-50 T 13-10-2018 Y11_40421 f26b8233dcd6262e3353c3ac2f06099c 261 SUPERFAMILY SSF53067 153 236 3.5E-13 T 13-10-2018 Y11_40421 f26b8233dcd6262e3353c3ac2f06099c 261 Gene3D G3DSA:3.30.420.380 13 236 6.6E-50 T 13-10-2018 Y11_40421 f26b8233dcd6262e3353c3ac2f06099c 261 SUPERFAMILY SSF53067 11 151 3.95E-27 T 13-10-2018 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 SUPERFAMILY SSF51905 1 314 1.52E-55 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 1.5E-49 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 Gene3D G3DSA:3.50.50.60 118 244 5.1E-129 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 8.9E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 8.9E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 8.9E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 8.9E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 8.9E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 8.9E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 8.9E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 8.9E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 8.9E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.0E-125 T 13-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 Gene3D G3DSA:3.50.50.60 9 311 5.1E-129 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.4E-41 T 13-10-2018 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 6.4E-41 T 13-10-2018 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 6.4E-41 T 13-10-2018 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 6.4E-41 T 13-10-2018 Y11_03981 e1675cf3323ec37493abd57afe7df14c 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 6.4E-41 T 13-10-2018 Y11_13831 c2ddbf6b49a7cfbce205b2d71938b23c 376 Gene3D G3DSA:1.20.1420.20 129 376 6.8E-100 T 13-10-2018 IPR038352 Imelysin-like domain superfamily Y11_13831 c2ddbf6b49a7cfbce205b2d71938b23c 376 Pfam PF13473 Cupredoxin-like domain 13 116 1.8E-23 T 13-10-2018 IPR028096 EfeO-type cupredoxin-like domain Y11_13831 c2ddbf6b49a7cfbce205b2d71938b23c 376 Pfam PF09375 Imelysin 137 369 2.2E-44 T 13-10-2018 IPR018976 Imelysin-like domain Y11_13831 c2ddbf6b49a7cfbce205b2d71938b23c 376 SUPERFAMILY SSF49503 15 116 3.35E-5 T 13-10-2018 IPR008972 Cupredoxin Y11_14661 16b834e93b7f24c4cd68b014ad852af4 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 6.8E-118 T 13-10-2018 IPR022522 Flagellar motor stator, MotA Y11_14661 16b834e93b7f24c4cd68b014ad852af4 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 139 239 2.4E-11 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Y11_14661 16b834e93b7f24c4cd68b014ad852af4 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 13-10-2018 IPR000540 Flagellar motor protein MotA, conserved site Y11_03031 582c1d9ff11ff5dd0d908aa8c38cfc85 530 Pfam PF00005 ABC transporter 27 185 2.8E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_03031 582c1d9ff11ff5dd0d908aa8c38cfc85 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 527 0.46 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Y11_03031 582c1d9ff11ff5dd0d908aa8c38cfc85 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 264 6.5E-4 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Y11_03031 582c1d9ff11ff5dd0d908aa8c38cfc85 530 SUPERFAMILY SSF52540 6 257 2.77E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_03031 582c1d9ff11ff5dd0d908aa8c38cfc85 530 Gene3D G3DSA:3.40.50.300 274 529 1.8E-82 T 13-10-2018 Y11_03031 582c1d9ff11ff5dd0d908aa8c38cfc85 530 Gene3D G3DSA:3.40.50.300 4 271 3.3E-79 T 13-10-2018 Y11_03031 582c1d9ff11ff5dd0d908aa8c38cfc85 530 Pfam PF00005 ABC transporter 303 454 2.4E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_03031 582c1d9ff11ff5dd0d908aa8c38cfc85 530 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_03031 582c1d9ff11ff5dd0d908aa8c38cfc85 530 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_03031 582c1d9ff11ff5dd0d908aa8c38cfc85 530 SUPERFAMILY SSF52540 276 525 2.46E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_03031 582c1d9ff11ff5dd0d908aa8c38cfc85 530 SMART SM00382 35 235 9.2E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_03031 582c1d9ff11ff5dd0d908aa8c38cfc85 530 SMART SM00382 312 502 3.6E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_28481 8493da3f59e0f47c9b681c3edc159bb5 389 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 108 273 4.6E-35 T 13-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain Y11_28481 8493da3f59e0f47c9b681c3edc159bb5 389 Pfam PF17482 Phage tail sheath C-terminal domain 274 376 5.3E-18 T 13-10-2018 IPR020287 Tail sheath protein, C-terminal domain Y11_12401 983095ddedd748547e599fe9637a9414 213 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 209 33.803 T 13-10-2018 IPR007432 Protein of unknown function DUF480 Y11_12401 983095ddedd748547e599fe9637a9414 213 Gene3D G3DSA:1.10.10.10 93 171 2.2E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_12401 983095ddedd748547e599fe9637a9414 213 Pfam PF04337 Protein of unknown function, DUF480 5 156 6.6E-62 T 13-10-2018 IPR007432 Protein of unknown function DUF480 Y11_12401 983095ddedd748547e599fe9637a9414 213 Gene3D G3DSA:1.10.10.10 1 87 1.1E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_12401 983095ddedd748547e599fe9637a9414 213 SUPERFAMILY SSF46785 88 169 3.18E-27 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_12401 983095ddedd748547e599fe9637a9414 213 SUPERFAMILY SSF46785 3 82 9.62E-34 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_40551 c2b5da37f73efe960440949470fe4b34 317 SUPERFAMILY SSF53850 95 298 2.33E-37 T 13-10-2018 Y11_40551 c2b5da37f73efe960440949470fe4b34 317 Gene3D G3DSA:3.40.190.290 96 305 3.5E-34 T 13-10-2018 Y11_40551 c2b5da37f73efe960440949470fe4b34 317 SUPERFAMILY SSF46785 3 84 1.14E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_40551 c2b5da37f73efe960440949470fe4b34 317 Gene3D G3DSA:1.10.10.10 4 95 3.3E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_40551 c2b5da37f73efe960440949470fe4b34 317 Pfam PF03466 LysR substrate binding domain 93 297 1.0E-36 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_40551 c2b5da37f73efe960440949470fe4b34 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.7E-14 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 Gene3D G3DSA:3.40.1010.10 215 331 3.7E-44 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 Gene3D G3DSA:3.30.950.10 332 467 3.9E-47 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 2.0E-50 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 Gene3D G3DSA:3.30.160.110 113 148 4.1E-20 T 13-10-2018 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 SUPERFAMILY SSF53790 215 456 1.31E-79 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 Gene3D G3DSA:3.40.50.720 1 112 6.2E-32 T 13-10-2018 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 Pfam PF14824 Sirohaem biosynthesis protein central 121 146 7.8E-9 T 13-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 6.7E-93 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 Pfam PF13241 Putative NAD(P)-binding 6 115 2.7E-25 T 13-10-2018 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 Gene3D G3DSA:1.10.8.210 149 213 4.2E-27 T 13-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 SUPERFAMILY SSF75615 114 202 6.15E-27 T 13-10-2018 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 SUPERFAMILY SSF51735 1 112 2.71E-26 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 51.548 T 13-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 PIRSF PIRSF036426 1 464 1.7E-205 T 13-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 7.6E-72 T 13-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_32401 970b64b4519ae435ec7cfe4fa5d5e8f0 470 Pfam PF10414 Sirohaem synthase dimerisation region 150 208 7.0E-20 T 13-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Y11_04071 01e1dbe4dbdba5950ac52c5c1b869f4d 246 Pfam PF13353 4Fe-4S single cluster domain 16 130 5.5E-18 T 13-10-2018 Y11_04071 01e1dbe4dbdba5950ac52c5c1b869f4d 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 6.2E-106 T 13-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 Y11_04071 01e1dbe4dbdba5950ac52c5c1b869f4d 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Y11_04071 01e1dbe4dbdba5950ac52c5c1b869f4d 246 Pfam PF04055 Radical SAM superfamily 24 178 4.2E-31 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_04071 01e1dbe4dbdba5950ac52c5c1b869f4d 246 SUPERFAMILY SSF102114 23 213 1.26E-22 T 13-10-2018 Y11_04071 01e1dbe4dbdba5950ac52c5c1b869f4d 246 Gene3D G3DSA:3.20.20.70 2 246 7.2E-105 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_04071 01e1dbe4dbdba5950ac52c5c1b869f4d 246 PIRSF PIRSF000371 44 246 2.4E-44 T 13-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Y11_04071 01e1dbe4dbdba5950ac52c5c1b869f4d 246 PIRSF PIRSF000371 2 47 5.7E-11 T 13-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Y11_p0301 46cbd216cfa5c84d360b30a23e8c836b 232 SUPERFAMILY SSF52218 18 219 9.72E-65 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_p0301 46cbd216cfa5c84d360b30a23e8c836b 232 Gene3D G3DSA:3.40.50.360 1 232 3.0E-78 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_p0301 46cbd216cfa5c84d360b30a23e8c836b 232 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 6 218 2.3E-114 T 13-10-2018 IPR014063 Arsenate resistance ArsH Y11_p0301 46cbd216cfa5c84d360b30a23e8c836b 232 Pfam PF03358 NADPH-dependent FMN reductase 26 171 7.0E-28 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Y11_14941 54048b48ee13d48c3872d50ede656af4 762 Gene3D G3DSA:2.60.40.3110 227 289 4.3E-21 T 13-10-2018 Y11_14941 54048b48ee13d48c3872d50ede656af4 762 SUPERFAMILY SSF141729 2 109 2.09E-14 T 13-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 Y11_14941 54048b48ee13d48c3872d50ede656af4 762 Pfam PF13953 PapC C-terminal domain 683 745 5.8E-11 T 13-10-2018 IPR025949 PapC-like, C-terminal domain Y11_14941 54048b48ee13d48c3872d50ede656af4 762 Pfam PF13954 PapC N-terminal domain 3 129 5.3E-14 T 13-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 Y11_14941 54048b48ee13d48c3872d50ede656af4 762 Pfam PF00577 Outer membrane usher protein 146 674 2.1E-68 T 13-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 Y11_14941 54048b48ee13d48c3872d50ede656af4 762 Gene3D G3DSA:3.10.20.410 1 110 2.1E-5 T 13-10-2018 Y11_14941 54048b48ee13d48c3872d50ede656af4 762 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 254 264 - T 13-10-2018 IPR018030 Fimbrial membrane usher, conserved site Y11_14941 54048b48ee13d48c3872d50ede656af4 762 Gene3D G3DSA:2.60.40.2610 589 678 3.2E-12 T 13-10-2018 Y11_12011 9f1f2dee6c7104c0f8f572b5f7733182 144 SUPERFAMILY SSF53062 1 127 6.54E-34 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Y11_12011 9f1f2dee6c7104c0f8f572b5f7733182 144 Pfam PF03610 PTS system fructose IIA component 4 113 1.9E-27 T 13-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 Y11_12011 9f1f2dee6c7104c0f8f572b5f7733182 144 Gene3D G3DSA:3.40.50.510 1 138 3.9E-33 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Y11_08341 625bd5aef644d7f089b59a00853a9cbf 116 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 3.1E-47 T 13-10-2018 IPR004480 Monothiol glutaredoxin-related Y11_08341 625bd5aef644d7f089b59a00853a9cbf 116 Gene3D G3DSA:3.40.30.10 1 107 1.1E-33 T 13-10-2018 Y11_08341 625bd5aef644d7f089b59a00853a9cbf 116 SUPERFAMILY SSF52833 2 101 6.32E-36 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_08341 625bd5aef644d7f089b59a00853a9cbf 116 Pfam PF00462 Glutaredoxin 16 80 9.3E-19 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Y11_08341 625bd5aef644d7f089b59a00853a9cbf 116 PIRSF PIRSF005894 1 107 4.4E-52 T 13-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 Y11_04741 db1b403d63c175cb732c2487d0da75d8 394 Gene3D G3DSA:3.40.50.150 181 394 8.1E-69 T 13-10-2018 Y11_04741 db1b403d63c175cb732c2487d0da75d8 394 SUPERFAMILY SSF88697 2 70 6.96E-16 T 13-10-2018 IPR015947 PUA-like superfamily Y11_04741 db1b403d63c175cb732c2487d0da75d8 394 SMART SM00359 1 86 3.0E-16 T 13-10-2018 IPR002478 PUA domain GO:0003723 Y11_04741 db1b403d63c175cb732c2487d0da75d8 394 Gene3D G3DSA:3.30.750.80 71 179 2.7E-38 T 13-10-2018 Y11_04741 db1b403d63c175cb732c2487d0da75d8 394 Gene3D G3DSA:2.30.130.10 1 70 3.3E-29 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 Y11_04741 db1b403d63c175cb732c2487d0da75d8 394 SUPERFAMILY SSF53335 77 390 9.48E-71 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_04741 db1b403d63c175cb732c2487d0da75d8 394 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 108 368 9.6E-29 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Y11_14731 b9bec1fdd3c53abca35b6263409895d9 232 Pfam PF02308 MgtC family 10 129 3.7E-38 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Y11_14731 b9bec1fdd3c53abca35b6263409895d9 232 Gene3D G3DSA:3.30.70.260 140 230 4.8E-15 T 13-10-2018 Y11_14731 b9bec1fdd3c53abca35b6263409895d9 232 PRINTS PR01837 MgtC/SapB protein signature 32 50 8.8E-47 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Y11_14731 b9bec1fdd3c53abca35b6263409895d9 232 PRINTS PR01837 MgtC/SapB protein signature 57 79 8.8E-47 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Y11_14731 b9bec1fdd3c53abca35b6263409895d9 232 PRINTS PR01837 MgtC/SapB protein signature 13 32 8.8E-47 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Y11_14731 b9bec1fdd3c53abca35b6263409895d9 232 PRINTS PR01837 MgtC/SapB protein signature 84 108 8.8E-47 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Y11_00101 e9122bbae18225ebe0f42664cc6b9c4c 289 Pfam PF04228 Putative neutral zinc metallopeptidase 1 286 2.1E-137 T 13-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative Y11_37661 6d0030f265bbbdb1866fb31d2f87a9b8 414 Pfam PF04932 O-Antigen ligase 200 342 2.6E-17 T 13-10-2018 IPR007016 O-antigen ligase-related Y11_21851 eeff2ea28b97016ecb8b4cbb1938c2a0 146 TIGRFAM TIGR01068 thioredoxin: thioredoxin 43 138 6.7E-35 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Y11_21851 eeff2ea28b97016ecb8b4cbb1938c2a0 146 SUPERFAMILY SSF52833 25 139 2.25E-37 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_21851 eeff2ea28b97016ecb8b4cbb1938c2a0 146 Gene3D G3DSA:2.20.28.140 1 34 2.0E-19 T 13-10-2018 Y11_21851 eeff2ea28b97016ecb8b4cbb1938c2a0 146 Gene3D G3DSA:3.40.30.10 35 144 2.2E-34 T 13-10-2018 Y11_21851 eeff2ea28b97016ecb8b4cbb1938c2a0 146 Pfam PF00085 Thioredoxin 37 137 6.8E-27 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 Y11_21851 eeff2ea28b97016ecb8b4cbb1938c2a0 146 PIRSF PIRSF000077 35 139 8.1E-32 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Y11_21851 eeff2ea28b97016ecb8b4cbb1938c2a0 146 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Y11_21851 eeff2ea28b97016ecb8b4cbb1938c2a0 146 PRINTS PR00421 Thioredoxin family signature 103 114 1.0E-7 T 13-10-2018 Y11_21851 eeff2ea28b97016ecb8b4cbb1938c2a0 146 PRINTS PR00421 Thioredoxin family signature 63 72 1.0E-7 T 13-10-2018 Y11_21851 eeff2ea28b97016ecb8b4cbb1938c2a0 146 PRINTS PR00421 Thioredoxin family signature 55 63 1.0E-7 T 13-10-2018 Y11_25121 8f7c3e9c499ed2c2cb68d13c840b8e36 89 Pfam PF02371 Transposase IS116/IS110/IS902 family 47 82 3.6E-7 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_22781 59985d6335724c584f1b078e98522e5a 349 SUPERFAMILY SSF55120 2 339 3.6E-105 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_22781 59985d6335724c584f1b078e98522e5a 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 189 336 7.9E-18 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_22781 59985d6335724c584f1b078e98522e5a 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 8 166 2.3E-41 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_22781 59985d6335724c584f1b078e98522e5a 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 4 341 28.18 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_22781 59985d6335724c584f1b078e98522e5a 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 4 340 2.1E-80 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_22781 59985d6335724c584f1b078e98522e5a 349 Gene3D G3DSA:3.30.2340.10 166 300 2.1E-120 T 13-10-2018 Y11_22781 59985d6335724c584f1b078e98522e5a 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 76 89 - T 13-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 Y11_22781 59985d6335724c584f1b078e98522e5a 349 Gene3D G3DSA:3.30.2350.20 16 336 2.1E-120 T 13-10-2018 Y11_32571 8fae8d253a7eb782ca7c8454b2c8a54c 135 Gene3D G3DSA:3.30.300.20 35 133 3.5E-31 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Y11_32571 8fae8d253a7eb782ca7c8454b2c8a54c 135 Gene3D G3DSA:2.20.25.10 1 34 1.6E-21 T 13-10-2018 Y11_32571 8fae8d253a7eb782ca7c8454b2c8a54c 135 Pfam PF02566 OsmC-like protein 30 127 3.2E-19 T 13-10-2018 IPR003718 OsmC/Ohr family Y11_32571 8fae8d253a7eb782ca7c8454b2c8a54c 135 SUPERFAMILY SSF82784 1 131 3.93E-42 T 13-10-2018 IPR036102 OsmC/Ohr superfamily Y11_32391 7444bcfcd9488bb2c2960b8cf62480b5 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 28 44 2.0E-29 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Y11_32391 7444bcfcd9488bb2c2960b8cf62480b5 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 207 217 2.0E-29 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Y11_32391 7444bcfcd9488bb2c2960b8cf62480b5 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 154 175 2.0E-29 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Y11_32391 7444bcfcd9488bb2c2960b8cf62480b5 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 78 97 2.0E-29 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Y11_32391 7444bcfcd9488bb2c2960b8cf62480b5 346 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 24 33 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_32391 7444bcfcd9488bb2c2960b8cf62480b5 346 Pfam PF00579 tRNA synthetases class I (W and Y) 13 297 5.4E-88 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Y11_32391 7444bcfcd9488bb2c2960b8cf62480b5 346 Gene3D G3DSA:1.10.240.10 198 310 6.6E-144 T 13-10-2018 Y11_32391 7444bcfcd9488bb2c2960b8cf62480b5 346 Gene3D G3DSA:3.40.50.620 18 341 6.6E-144 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_32391 7444bcfcd9488bb2c2960b8cf62480b5 346 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 15 342 1.4E-119 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Y11_32391 7444bcfcd9488bb2c2960b8cf62480b5 346 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 15 343 42.943 T 13-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 Y11_32391 7444bcfcd9488bb2c2960b8cf62480b5 346 SUPERFAMILY SSF52374 17 342 8.04E-99 T 13-10-2018 Y11_23771 1aa5816c6c10dfc2cf3e6f83f99be969 496 Gene3D G3DSA:3.40.640.10 118 484 4.9E-108 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_23771 1aa5816c6c10dfc2cf3e6f83f99be969 496 SUPERFAMILY SSF53383 101 489 6.85E-82 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_23771 1aa5816c6c10dfc2cf3e6f83f99be969 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 1.7E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_23771 1aa5816c6c10dfc2cf3e6f83f99be969 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 1.7E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_23771 1aa5816c6c10dfc2cf3e6f83f99be969 496 SUPERFAMILY SSF46785 21 89 5.28E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_23771 1aa5816c6c10dfc2cf3e6f83f99be969 496 SMART SM00345 27 86 1.3E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_23771 1aa5816c6c10dfc2cf3e6f83f99be969 496 Gene3D G3DSA:1.10.10.10 13 97 6.5E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_23771 1aa5816c6c10dfc2cf3e6f83f99be969 496 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 86 4.4E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Y11_23771 1aa5816c6c10dfc2cf3e6f83f99be969 496 Pfam PF00155 Aminotransferase class I and II 163 457 2.4E-19 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_21801 3faa2da5799b1a4e6181b292fbc503c5 456 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 19 442 3.8E-95 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Y11_21801 3faa2da5799b1a4e6181b292fbc503c5 456 Gene3D G3DSA:2.20.200.10 68 327 2.9E-104 T 13-10-2018 Y11_21801 3faa2da5799b1a4e6181b292fbc503c5 456 Gene3D G3DSA:1.20.1600.10 23 442 2.9E-104 T 13-10-2018 Y11_21801 3faa2da5799b1a4e6181b292fbc503c5 456 SUPERFAMILY SSF56954 14 444 2.88E-82 T 13-10-2018 Y11_21801 3faa2da5799b1a4e6181b292fbc503c5 456 Pfam PF02321 Outer membrane efflux protein 260 440 2.0E-15 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Y11_21801 3faa2da5799b1a4e6181b292fbc503c5 456 Pfam PF02321 Outer membrane efflux protein 32 227 1.2E-23 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Y11_18721 de96838f63eaddabbe7f2064cf1defbf 247 Gene3D G3DSA:3.40.1390.30 14 232 8.8E-86 T 13-10-2018 Y11_18721 de96838f63eaddabbe7f2064cf1defbf 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 233 6.3E-57 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Y11_18721 de96838f63eaddabbe7f2064cf1defbf 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 6.9E-71 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Y11_18721 de96838f63eaddabbe7f2064cf1defbf 247 Gene3D G3DSA:3.40.1390.30 97 218 8.8E-86 T 13-10-2018 Y11_18721 de96838f63eaddabbe7f2064cf1defbf 247 SUPERFAMILY SSF102705 1 246 3.14E-83 T 13-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Y11_33191 dc3a3eb259376aa30fadd79b67b4b5e5 136 SUPERFAMILY SSF81330 12 127 3.01E-35 T 13-10-2018 IPR036019 Gated mechanosensitive channel Y11_33191 dc3a3eb259376aa30fadd79b67b4b5e5 136 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 13-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site Y11_33191 dc3a3eb259376aa30fadd79b67b4b5e5 136 Gene3D G3DSA:1.10.1200.120 3 134 8.9E-43 T 13-10-2018 IPR036019 Gated mechanosensitive channel Y11_33191 dc3a3eb259376aa30fadd79b67b4b5e5 136 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 7.1E-54 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Y11_33191 dc3a3eb259376aa30fadd79b67b4b5e5 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 3.6E-12 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Y11_33191 dc3a3eb259376aa30fadd79b67b4b5e5 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 3.6E-12 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Y11_33191 dc3a3eb259376aa30fadd79b67b4b5e5 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 3.6E-12 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Y11_33191 dc3a3eb259376aa30fadd79b67b4b5e5 136 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 132 24.232 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Y11_33191 dc3a3eb259376aa30fadd79b67b4b5e5 136 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 5.8E-46 T 13-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L Y11_37671 2eebab73a32613d284d6cc2663c90579 502 Gene3D G3DSA:1.20.1740.10 3 492 8.3E-49 T 13-10-2018 Y11_37671 2eebab73a32613d284d6cc2663c90579 502 PIRSF PIRSF006060 1 501 1.3E-41 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_37671 2eebab73a32613d284d6cc2663c90579 502 Pfam PF13520 Amino acid permease 9 442 3.4E-61 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_29981 fe605abc7c6415d6bc8ce8c412e6fafc 269 Pfam PF03180 NLPA lipoprotein 29 265 1.1E-56 T 13-10-2018 IPR004872 Lipoprotein NlpA family Y11_29981 fe605abc7c6415d6bc8ce8c412e6fafc 269 Gene3D G3DSA:3.40.190.10 43 261 1.2E-68 T 13-10-2018 Y11_29981 fe605abc7c6415d6bc8ce8c412e6fafc 269 Gene3D G3DSA:3.40.190.10 108 217 1.2E-68 T 13-10-2018 Y11_29981 fe605abc7c6415d6bc8ce8c412e6fafc 269 SUPERFAMILY SSF53850 29 258 3.37E-51 T 13-10-2018 Y11_39061 5e2673d9b91464ff09e7e7cd74da74c2 460 Pfam PF08245 Mur ligase middle domain 93 273 2.5E-27 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Y11_39061 5e2673d9b91464ff09e7e7cd74da74c2 460 Gene3D G3DSA:3.90.190.20 292 460 2.1E-51 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Y11_39061 5e2673d9b91464ff09e7e7cd74da74c2 460 SUPERFAMILY SSF53244 292 446 8.06E-47 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Y11_39061 5e2673d9b91464ff09e7e7cd74da74c2 460 Pfam PF01225 Mur ligase family, catalytic domain 1 87 8.6E-22 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Y11_39061 5e2673d9b91464ff09e7e7cd74da74c2 460 SUPERFAMILY SSF53623 74 291 1.44E-73 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Y11_39061 5e2673d9b91464ff09e7e7cd74da74c2 460 Gene3D G3DSA:3.40.50.720 1 76 1.8E-24 T 13-10-2018 Y11_39061 5e2673d9b91464ff09e7e7cd74da74c2 460 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 450 39.755 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_39061 5e2673d9b91464ff09e7e7cd74da74c2 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 302 387 3.5E-21 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Y11_39061 5e2673d9b91464ff09e7e7cd74da74c2 460 Gene3D G3DSA:3.40.1190.10 77 291 5.7E-87 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Y11_39061 5e2673d9b91464ff09e7e7cd74da74c2 460 SUPERFAMILY SSF51984 1 75 5.76E-21 T 13-10-2018 Y11_39061 5e2673d9b91464ff09e7e7cd74da74c2 460 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 1 444 3.4E-174 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_36091 0fd6285e25dc6069ea9db4916d2225c8 635 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 13-10-2018 IPR014762 DNA mismatch repair, conserved site Y11_36091 0fd6285e25dc6069ea9db4916d2225c8 635 Gene3D G3DSA:2.30.42.20 455 630 6.2E-68 T 13-10-2018 Y11_36091 0fd6285e25dc6069ea9db4916d2225c8 635 Pfam PF08676 MutL C terminal dimerisation domain 455 584 2.0E-26 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Y11_36091 0fd6285e25dc6069ea9db4916d2225c8 635 Gene3D G3DSA:3.30.230.10 217 329 2.4E-42 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y11_36091 0fd6285e25dc6069ea9db4916d2225c8 635 SMART SM01340 212 330 5.1E-59 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Y11_36091 0fd6285e25dc6069ea9db4916d2225c8 635 SUPERFAMILY SSF118116 453 633 5.36E-43 T 13-10-2018 IPR037198 MutL, C-terminal domain superfamily Y11_36091 0fd6285e25dc6069ea9db4916d2225c8 635 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 7.7E-102 T 13-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 Y11_36091 0fd6285e25dc6069ea9db4916d2225c8 635 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 3.5E-39 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Y11_36091 0fd6285e25dc6069ea9db4916d2225c8 635 SUPERFAMILY SSF54211 191 330 1.9E-38 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_36091 0fd6285e25dc6069ea9db4916d2225c8 635 SMART SM00853 458 593 2.4E-13 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Y11_36091 0fd6285e25dc6069ea9db4916d2225c8 635 Gene3D G3DSA:3.30.565.10 1 216 1.2E-70 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_36091 0fd6285e25dc6069ea9db4916d2225c8 635 Gene3D G3DSA:3.30.1370.100 499 587 6.2E-68 T 13-10-2018 Y11_36091 0fd6285e25dc6069ea9db4916d2225c8 635 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 5.8E-12 T 13-10-2018 Y11_36091 0fd6285e25dc6069ea9db4916d2225c8 635 SUPERFAMILY SSF55874 1 204 4.98E-55 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_36091 0fd6285e25dc6069ea9db4916d2225c8 635 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 632 25.955 T 13-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 Y11_32891 3620159c93fd715f91b4f089f2d098f6 201 Gene3D G3DSA:3.40.1370.10 1 201 2.2E-68 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Y11_32891 3620159c93fd715f91b4f089f2d098f6 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 2.4E-74 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_32891 3620159c93fd715f91b4f089f2d098f6 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 33.953 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_32891 3620159c93fd715f91b4f089f2d098f6 201 SUPERFAMILY SSF52166 9 200 1.96E-72 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Y11_32891 3620159c93fd715f91b4f089f2d098f6 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 1.8E-63 T 13-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Y11_p0231 9d785b281378ab68f874372773d80492 291 SUPERFAMILY SSF103481 41 141 5.62E-12 T 13-10-2018 Y11_p0231 9d785b281378ab68f874372773d80492 291 SUPERFAMILY SSF103481 190 290 1.57E-8 T 13-10-2018 Y11_p0231 9d785b281378ab68f874372773d80492 291 Pfam PF00892 EamA-like transporter family 8 140 7.9E-26 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_p0231 9d785b281378ab68f874372773d80492 291 Pfam PF00892 EamA-like transporter family 153 288 9.2E-23 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_35531 8c59738567a2892a04c72e27564cbbe4 265 Gene3D G3DSA:3.30.1150.10 118 264 5.8E-27 T 13-10-2018 Y11_35531 8c59738567a2892a04c72e27564cbbe4 265 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 184 262 1.2E-11 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 Y11_35531 8c59738567a2892a04c72e27564cbbe4 265 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 185 255 5.8E-14 T 13-10-2018 IPR006260 TonB/TolA, C-terminal Y11_35531 8c59738567a2892a04c72e27564cbbe4 265 SUPERFAMILY SSF74653 160 251 2.09E-17 T 13-10-2018 Y11_14651 ce955b32083489740da27eb2ccf00012 409 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 66 9.7E-21 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain Y11_14651 ce955b32083489740da27eb2ccf00012 409 SUPERFAMILY SSF103088 155 263 9.55E-19 T 13-10-2018 IPR036737 OmpA-like domain superfamily Y11_14651 ce955b32083489740da27eb2ccf00012 409 Gene3D G3DSA:3.30.1330.60 106 293 1.6E-62 T 13-10-2018 IPR036737 OmpA-like domain superfamily Y11_14651 ce955b32083489740da27eb2ccf00012 409 Pfam PF00691 OmpA family 159 253 1.3E-12 T 13-10-2018 IPR006665 OmpA-like domain Y11_09211 17491e0a38493b203dd2cec29d95658a 285 SUPERFAMILY SSF103473 21 276 1.31E-18 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_09211 17491e0a38493b203dd2cec29d95658a 285 Pfam PF07690 Major Facilitator Superfamily 44 244 1.1E-13 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_09211 17491e0a38493b203dd2cec29d95658a 285 Gene3D G3DSA:1.20.1250.20 16 233 2.9E-50 T 13-10-2018 Y11_19961 325542d22750bd1140449ea207b8d62a 358 SUPERFAMILY SSF53756 4 346 5.89E-69 T 13-10-2018 Y11_19961 325542d22750bd1140449ea207b8d62a 358 Gene3D G3DSA:3.40.50.2000 170 341 6.0E-61 T 13-10-2018 Y11_19961 325542d22750bd1140449ea207b8d62a 358 Gene3D G3DSA:3.40.50.2000 15 344 6.0E-61 T 13-10-2018 Y11_19961 325542d22750bd1140449ea207b8d62a 358 Pfam PF00534 Glycosyl transferases group 1 177 331 1.3E-33 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Y11_19961 325542d22750bd1140449ea207b8d62a 358 Pfam PF13439 Glycosyltransferase Family 4 15 169 2.3E-15 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Y11_31281 d9ed6ee46527d0ca3962a056c940c4df 159 SUPERFAMILY SSF49785 23 147 1.49E-23 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Y11_31281 d9ed6ee46527d0ca3962a056c940c4df 159 Pfam PF00754 F5/8 type C domain 27 145 1.7E-17 T 13-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain Y11_31281 d9ed6ee46527d0ca3962a056c940c4df 159 Gene3D G3DSA:2.60.120.260 17 159 1.5E-40 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Y11_19901 22498b0d5a43cb6782b0bc0a161d7e87 434 SUPERFAMILY SSF53613 36 416 1.96E-44 T 13-10-2018 IPR029056 Ribokinase-like Y11_19901 22498b0d5a43cb6782b0bc0a161d7e87 434 Pfam PF00294 pfkB family carbohydrate kinase 138 294 4.4E-8 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Y11_30581 0b247fd7c9b4561c94c6c2846aacd10f 486 Gene3D G3DSA:3.30.420.40 242 483 2.4E-92 T 13-10-2018 Y11_30581 0b247fd7c9b4561c94c6c2846aacd10f 486 PIRSF PIRSF000538 1 485 4.0E-138 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Y11_30581 0b247fd7c9b4561c94c6c2846aacd10f 486 SUPERFAMILY SSF53067 2 242 9.67E-75 T 13-10-2018 Y11_30581 0b247fd7c9b4561c94c6c2846aacd10f 486 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 435 7.3E-31 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Y11_30581 0b247fd7c9b4561c94c6c2846aacd10f 486 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 1.4E-82 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Y11_30581 0b247fd7c9b4561c94c6c2846aacd10f 486 SUPERFAMILY SSF53067 242 482 1.3E-65 T 13-10-2018 Y11_30581 0b247fd7c9b4561c94c6c2846aacd10f 486 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Y11_30581 0b247fd7c9b4561c94c6c2846aacd10f 486 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 1.8E-184 T 13-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 Y11_30581 0b247fd7c9b4561c94c6c2846aacd10f 486 Gene3D G3DSA:3.30.420.40 1 241 5.0E-94 T 13-10-2018 Y11_42581 b1b4eb398938936d93a39ed7582be6cc 295 Pfam PF02126 Phosphotriesterase family 4 290 2.7E-106 T 13-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 Y11_42581 b1b4eb398938936d93a39ed7582be6cc 295 SUPERFAMILY SSF51556 6 290 1.97E-92 T 13-10-2018 IPR032466 Metal-dependent hydrolase Y11_42581 b1b4eb398938936d93a39ed7582be6cc 295 Gene3D G3DSA:3.20.20.140 4 291 2.6E-100 T 13-10-2018 Y11_42581 b1b4eb398938936d93a39ed7582be6cc 295 PIRSF PIRSF016839 1 295 5.6E-122 T 13-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 Y11_36441 321f08bb2a3641ac648d7f819c2665f6 102 SUPERFAMILY SSF110857 1 97 3.01E-24 T 13-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily Y11_36441 321f08bb2a3641ac648d7f819c2665f6 102 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 91 3.9E-16 T 13-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like Y11_36441 321f08bb2a3641ac648d7f819c2665f6 102 Gene3D G3DSA:3.10.490.10 1 101 4.0E-31 T 13-10-2018 Y11_04591 8d681de656fd43e2445bdf83d77157f3 180 SUPERFAMILY SSF46785 6 143 3.93E-36 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_04591 8d681de656fd43e2445bdf83d77157f3 180 Gene3D G3DSA:1.10.10.10 1 168 4.4E-50 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_04591 8d681de656fd43e2445bdf83d77157f3 180 Pfam PF01638 HxlR-like helix-turn-helix 20 105 1.4E-20 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type Y11_25711 ea2643154787f0fcec1d34f1c1a60c83 224 Pfam PF01548 Transposase 16 156 1.6E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_11251 ea2643154787f0fcec1d34f1c1a60c83 224 Pfam PF01548 Transposase 16 156 1.6E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_40241 ea2643154787f0fcec1d34f1c1a60c83 224 Pfam PF01548 Transposase 16 156 1.6E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_00431 ea2643154787f0fcec1d34f1c1a60c83 224 Pfam PF01548 Transposase 16 156 1.6E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_26521 6f02b58bbdd81629dbddd1a6500de6ce 164 Gene3D G3DSA:3.40.930.10 5 162 1.4E-61 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Y11_26521 6f02b58bbdd81629dbddd1a6500de6ce 164 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 12 158 7.5E-60 T 13-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 Y11_26521 6f02b58bbdd81629dbddd1a6500de6ce 164 SUPERFAMILY SSF55804 12 158 7.72E-41 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Y11_26521 6f02b58bbdd81629dbddd1a6500de6ce 164 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 16 158 1.5E-36 T 13-10-2018 IPR002178 PTS EIIA type-2 domain Y11_26521 6f02b58bbdd81629dbddd1a6500de6ce 164 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 61 77 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain Y11_16501 6915aca6164c59a5fde2cb39aeb1b63e 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 323 3.0E-39 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_12831 91307c19e2ea361072c0c292a0d4f911 155 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 130 1.8E-46 T 13-10-2018 IPR009678 Bacteriophage tail completion protein R Y11_11731 5393dd2438f1dadc52261c978ec3b10a 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 4.7E-30 T 13-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Y11_11731 5393dd2438f1dadc52261c978ec3b10a 289 Pfam PF01380 SIS domain 124 252 2.1E-24 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_11731 5393dd2438f1dadc52261c978ec3b10a 289 SUPERFAMILY SSF53697 95 277 2.97E-42 T 13-10-2018 Y11_11731 5393dd2438f1dadc52261c978ec3b10a 289 Gene3D G3DSA:1.10.10.10 1 79 1.2E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_11731 5393dd2438f1dadc52261c978ec3b10a 289 SUPERFAMILY SSF46689 1 80 4.48E-21 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_11731 5393dd2438f1dadc52261c978ec3b10a 289 Gene3D G3DSA:3.40.50.10490 95 277 4.0E-42 T 13-10-2018 Y11_16621 5787c64da5ff091a0337fef36fbdf0ab 297 Pfam PF00483 Nucleotidyl transferase 5 253 3.2E-22 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Y11_16621 5787c64da5ff091a0337fef36fbdf0ab 297 Gene3D G3DSA:3.90.550.10 2 297 1.0E-79 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_16621 5787c64da5ff091a0337fef36fbdf0ab 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 273 5.4E-103 T 13-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Y11_16621 5787c64da5ff091a0337fef36fbdf0ab 297 SUPERFAMILY SSF53448 1 290 1.49E-56 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_16261 0bccfb7291ab5bbd7df45a38a0b12737 91 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 87 4.6E-29 T 13-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Y11_16261 0bccfb7291ab5bbd7df45a38a0b12737 91 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 87 5.0E-26 T 13-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Y11_16261 0bccfb7291ab5bbd7df45a38a0b12737 91 SUPERFAMILY SSF159133 1 90 4.19E-25 T 13-10-2018 IPR036677 EutN/Ccml superfamily Y11_16261 0bccfb7291ab5bbd7df45a38a0b12737 91 Gene3D G3DSA:2.40.50.220 1 91 3.5E-31 T 13-10-2018 IPR036677 EutN/Ccml superfamily Y11_43451 11e78a2b846aae3aac8f14af704935c1 212 SUPERFAMILY SSF53328 2 207 1.57E-68 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Y11_43451 11e78a2b846aae3aac8f14af704935c1 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 1.3E-78 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Y11_43451 11e78a2b846aae3aac8f14af704935c1 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Y11_43451 11e78a2b846aae3aac8f14af704935c1 212 Pfam PF00551 Formyl transferase 2 182 4.4E-65 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Y11_43451 11e78a2b846aae3aac8f14af704935c1 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.383 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Y11_43451 11e78a2b846aae3aac8f14af704935c1 212 Gene3D G3DSA:3.40.50.170 2 212 7.2E-87 T 13-10-2018 Y11_29441 84ef819606e2d0512e84ff6f8ca3198f 89 Gene3D G3DSA:1.10.1580.20 1 89 2.0E-45 T 13-10-2018 IPR038134 YihD-like superfamily Y11_29441 84ef819606e2d0512e84ff6f8ca3198f 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 2.4E-45 T 13-10-2018 IPR009383 Protein of unknown function DUF1040 Y11_29441 84ef819606e2d0512e84ff6f8ca3198f 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 3.0E-37 T 13-10-2018 IPR009383 Protein of unknown function DUF1040 Y11_16101 3a3c72a03b311222b81ab9bf1aa24e98 318 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 7 297 1.2E-72 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Y11_16101 3a3c72a03b311222b81ab9bf1aa24e98 318 Pfam PF03186 CobD/Cbib protein 7 297 2.4E-106 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Y11_16101 3a3c72a03b311222b81ab9bf1aa24e98 318 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 318 107.189 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Y11_00791 569d402230ff8ffbf4ba22c7f9031bf4 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 3.9E-31 T 13-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor Y11_00791 569d402230ff8ffbf4ba22c7f9031bf4 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 2.0E-24 T 13-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor Y11_29001 ff4aa724797d897c7c625dac7ce793ca 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 1.9E-48 T 13-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Y11_29001 ff4aa724797d897c7c625dac7ce793ca 151 Pfam PF00692 dUTPase 16 149 4.3E-42 T 13-10-2018 IPR029054 dUTPase-like Y11_29001 ff4aa724797d897c7c625dac7ce793ca 151 SUPERFAMILY SSF51283 1 150 1.57E-54 T 13-10-2018 IPR036157 dUTPase-like superfamily Y11_29001 ff4aa724797d897c7c625dac7ce793ca 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 34.082 T 13-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Y11_29001 ff4aa724797d897c7c625dac7ce793ca 151 Gene3D G3DSA:2.70.40.10 1 150 7.6E-53 T 13-10-2018 IPR036157 dUTPase-like superfamily Y11_19281 4c5273fdcf735a3932b35d0f0c63a0b0 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.829 T 13-10-2018 IPR007454 Uncharacterised protein family UPF0250 Y11_19281 4c5273fdcf735a3932b35d0f0c63a0b0 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 3.8E-30 T 13-10-2018 IPR007454 Uncharacterised protein family UPF0250 Y11_19281 4c5273fdcf735a3932b35d0f0c63a0b0 87 Gene3D G3DSA:3.30.70.260 1 87 3.2E-35 T 13-10-2018 Y11_19281 4c5273fdcf735a3932b35d0f0c63a0b0 87 SUPERFAMILY SSF117991 1 87 3.27E-32 T 13-10-2018 IPR027471 YbeD-like domain superfamily Y11_03881 06d9ae9c283d8fedbf73600043fc5b98 327 Pfam PF04393 Protein of unknown function (DUF535) 33 311 1.4E-102 T 13-10-2018 IPR007488 Protein of unknown function DUF535 Y11_00351 674548c6569165288915dba9fdc0cb17 167 SUPERFAMILY SSF54862 36 161 7.95E-20 T 13-10-2018 Y11_00351 674548c6569165288915dba9fdc0cb17 167 Gene3D G3DSA:3.30.70.20 36 100 5.3E-7 T 13-10-2018 Y11_00351 674548c6569165288915dba9fdc0cb17 167 Pfam PF12838 4Fe-4S dicluster domain 110 157 2.3E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_00351 674548c6569165288915dba9fdc0cb17 167 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_00351 674548c6569165288915dba9fdc0cb17 167 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 27 164 23.172 T 13-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 Y11_00351 674548c6569165288915dba9fdc0cb17 167 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 39 50 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_00351 674548c6569165288915dba9fdc0cb17 167 Pfam PF13187 4Fe-4S dicluster domain 39 84 5.4E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_00351 674548c6569165288915dba9fdc0cb17 167 Gene3D G3DSA:3.30.70.20 101 161 8.2E-10 T 13-10-2018 Y11_00351 674548c6569165288915dba9fdc0cb17 167 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 6 159 3.7E-47 T 13-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 Y11_12071 5ccfe041cc9cca738c372758fccceb95 215 Pfam PF05598 Transposase domain (DUF772) 5 80 8.9E-24 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Y11_06661 e9e7097b51754fadff84b8e3ddd251cc 400 Pfam PF00872 Transposase, Mutator family 10 373 1.8E-101 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Y11_13051 e9e7097b51754fadff84b8e3ddd251cc 400 Pfam PF00872 Transposase, Mutator family 10 373 1.8E-101 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Y11_36571 a0cbb2b89847953c350b900c74597ab5 319 SUPERFAMILY SSF103481 43 147 1.7E-14 T 13-10-2018 Y11_36571 a0cbb2b89847953c350b900c74597ab5 319 Pfam PF00892 EamA-like transporter family 161 271 1.4E-15 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_36571 a0cbb2b89847953c350b900c74597ab5 319 Pfam PF00892 EamA-like transporter family 9 144 9.0E-29 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_30491 158c7c78dec9c5b6fe876c092af90624 216 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 6 204 8.8E-66 T 13-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 Y11_30491 158c7c78dec9c5b6fe876c092af90624 216 Pfam PF01292 Prokaryotic cytochrome b561 9 184 6.4E-23 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Y11_30491 158c7c78dec9c5b6fe876c092af90624 216 Gene3D G3DSA:1.20.950.20 1 215 1.4E-73 T 13-10-2018 Y11_30491 158c7c78dec9c5b6fe876c092af90624 216 SUPERFAMILY SSF81342 4 211 2.28E-56 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Y11_16901 2a1ffc091de1075022c87b79a5852143 358 Gene3D G3DSA:3.40.50.2300 144 312 6.1E-68 T 13-10-2018 Y11_16901 2a1ffc091de1075022c87b79a5852143 358 Gene3D G3DSA:3.40.50.2300 43 309 6.1E-68 T 13-10-2018 Y11_16901 2a1ffc091de1075022c87b79a5852143 358 SUPERFAMILY SSF53822 40 305 4.89E-40 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_16901 2a1ffc091de1075022c87b79a5852143 358 Pfam PF13407 Periplasmic binding protein domain 55 302 1.9E-26 T 13-10-2018 IPR025997 Periplasmic binding protein Y11_42661 2a7fb6277e314fc5a0c4ce17e5083b45 224 PIRSF PIRSF008159 7 224 3.4E-73 T 13-10-2018 IPR016537 Uncharacterised conserved protein UCP008159, Y11_42661 2a7fb6277e314fc5a0c4ce17e5083b45 224 Pfam PF06226 Protein of unknown function (DUF1007) 25 223 1.2E-63 T 13-10-2018 IPR010412 Protein of unknown function DUF1007 Y11_30591 76615e3b4b795348df95ae882808f54b 117 SUPERFAMILY SSF51658 6 116 8.36E-30 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily Y11_30591 76615e3b4b795348df95ae882808f54b 117 Gene3D G3DSA:3.20.20.150 1 117 1.6E-38 T 13-10-2018 Y11_32551 0e7dbfb650d16f2d8b1a7d94cf4d64aa 706 Pfam PF13515 Fusaric acid resistance protein-like 380 500 1.1E-21 T 13-10-2018 Y11_32551 0e7dbfb650d16f2d8b1a7d94cf4d64aa 706 Pfam PF12805 FUSC-like inner membrane protein yccS 64 332 2.6E-65 T 13-10-2018 IPR032692 Integral membrane protein YccS, N-terminal Y11_32551 0e7dbfb650d16f2d8b1a7d94cf4d64aa 706 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 13 685 1.5E-159 T 13-10-2018 IPR010020 Integral membrane protein, YccS/YhfK Y11_05851 33ad6f4751e034956622e48301fb7123 118 Gene3D G3DSA:2.10.109.10 4 117 5.1E-36 T 13-10-2018 Y11_05851 33ad6f4751e034956622e48301fb7123 118 Pfam PF00717 Peptidase S24-like 35 86 6.8E-9 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Y11_05851 33ad6f4751e034956622e48301fb7123 118 SUPERFAMILY SSF51306 10 113 1.22E-25 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Y11_05851 33ad6f4751e034956622e48301fb7123 118 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 41 52 3.2E-5 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Y11_05851 33ad6f4751e034956622e48301fb7123 118 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 30 40 3.2E-5 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Y11_05851 33ad6f4751e034956622e48301fb7123 118 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 69 81 3.2E-5 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Y11_31321 10ac1734eb67c2c57f3bbb788b676d4f 66 Gene3D G3DSA:3.30.429.10 2 65 6.8E-27 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily Y11_31321 10ac1734eb67c2c57f3bbb788b676d4f 66 Pfam PF01361 Tautomerase enzyme 2 61 2.9E-24 T 13-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 Y11_31321 10ac1734eb67c2c57f3bbb788b676d4f 66 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 64 5.4E-30 T 13-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 Y11_31321 10ac1734eb67c2c57f3bbb788b676d4f 66 SUPERFAMILY SSF55331 2 64 3.81E-23 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily Y11_28241 fdea92dfee4f44fbfefb9f40266cb0d3 161 Pfam PF03737 Aldolase/RraA 5 152 9.0E-36 T 13-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Y11_28241 fdea92dfee4f44fbfefb9f40266cb0d3 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.193 T 13-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 Y11_28241 fdea92dfee4f44fbfefb9f40266cb0d3 161 Gene3D G3DSA:3.50.30.40 1 161 1.1E-61 T 13-10-2018 Y11_28241 fdea92dfee4f44fbfefb9f40266cb0d3 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 2.7E-62 T 13-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 Y11_28241 fdea92dfee4f44fbfefb9f40266cb0d3 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 5.2E-87 T 13-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 Y11_28241 fdea92dfee4f44fbfefb9f40266cb0d3 161 SUPERFAMILY SSF89562 2 158 2.75E-44 T 13-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Y11_07671 69ed73660ca6a6635acbf78b85073ec2 331 Gene3D G3DSA:3.40.50.300 51 261 7.1E-79 T 13-10-2018 Y11_07671 69ed73660ca6a6635acbf78b85073ec2 331 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 17 321 1.5E-117 T 13-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Y11_07671 69ed73660ca6a6635acbf78b85073ec2 331 SUPERFAMILY SSF52540 6 316 1.36E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_07671 69ed73660ca6a6635acbf78b85073ec2 331 Gene3D G3DSA:1.10.287.130 263 331 5.8E-10 T 13-10-2018 Y11_07671 69ed73660ca6a6635acbf78b85073ec2 331 Pfam PF03308 ArgK protein 22 291 7.2E-109 T 13-10-2018 Y11_07671 69ed73660ca6a6635acbf78b85073ec2 331 Gene3D G3DSA:1.20.5.170 1 50 1.2E-18 T 13-10-2018 Y11_35521 8d70d138bc000ac19e97bd3e19266c63 94 Pfam PF01206 Sulfurtransferase TusA 26 94 2.8E-19 T 13-10-2018 IPR001455 TusA-like domain Y11_35521 8d70d138bc000ac19e97bd3e19266c63 94 SUPERFAMILY SSF64307 8 94 8.11E-25 T 13-10-2018 IPR036868 TusA-like domain superfamily Y11_35521 8d70d138bc000ac19e97bd3e19266c63 94 Gene3D G3DSA:3.30.110.40 22 94 1.8E-30 T 13-10-2018 IPR036868 TusA-like domain superfamily Y11_35521 8d70d138bc000ac19e97bd3e19266c63 94 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 27 51 - T 13-10-2018 IPR001455 TusA-like domain Y11_42651 d4bd4f382abada693ad42c1bcf65baa4 427 SUPERFAMILY SSF63520 232 334 3.01E-20 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 Y11_42651 d4bd4f382abada693ad42c1bcf65baa4 427 Gene3D G3DSA:1.10.1790.10 232 332 1.3E-14 T 13-10-2018 Y11_42651 d4bd4f382abada693ad42c1bcf65baa4 427 Pfam PF00874 PRD domain 241 329 6.3E-18 T 13-10-2018 IPR011608 PRD domain GO:0006355 Y11_20741 f57a2eb255f6b0dbf1776d7c9e634c28 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_20741 f57a2eb255f6b0dbf1776d7c9e634c28 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 296 2.0E-25 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_18641 0a77e4475b96c1ae1d3539805bb12ed0 94 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 88 1.6E-15 T 13-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_18641 0a77e4475b96c1ae1d3539805bb12ed0 94 PIRSF PIRSF000178 1 94 9.1E-17 T 13-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_18641 0a77e4475b96c1ae1d3539805bb12ed0 94 SUPERFAMILY SSF81343 2 94 1.08E-19 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_18641 0a77e4475b96c1ae1d3539805bb12ed0 94 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 2 91 1.9E-23 T 13-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_18641 0a77e4475b96c1ae1d3539805bb12ed0 94 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 49 62 - T 13-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_18641 0a77e4475b96c1ae1d3539805bb12ed0 94 Gene3D G3DSA:1.20.1300.10 1 94 3.9E-28 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Y11_p0221 08896dd5f04995ae3bd5816e4b51ed37 470 SUPERFAMILY SSF54523 377 470 1.57E-20 T 13-10-2018 Y11_p0221 08896dd5f04995ae3bd5816e4b51ed37 470 Pfam PF05658 Head domain of trimeric autotransporter adhesin 95 115 5.2E-4 T 13-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 Y11_p0221 08896dd5f04995ae3bd5816e4b51ed37 470 Pfam PF05658 Head domain of trimeric autotransporter adhesin 139 161 1.9E-5 T 13-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 Y11_p0221 08896dd5f04995ae3bd5816e4b51ed37 470 SUPERFAMILY SSF101967 40 216 3.14E-40 T 13-10-2018 Y11_p0221 08896dd5f04995ae3bd5816e4b51ed37 470 Gene3D G3DSA:3.30.1300.30 368 470 8.4E-31 T 13-10-2018 Y11_p0221 08896dd5f04995ae3bd5816e4b51ed37 470 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 195 229 1.8E-8 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 Y11_p0221 08896dd5f04995ae3bd5816e4b51ed37 470 PRINTS PR01756 Yersinia outer membrane adhesin signature 373 389 1.1E-40 T 13-10-2018 IPR008126 Outer membrane adhesion, Yersinia GO:0005518|GO:0007155|GO:0009405|GO:0019867 Y11_p0221 08896dd5f04995ae3bd5816e4b51ed37 470 PRINTS PR01756 Yersinia outer membrane adhesin signature 120 140 1.1E-40 T 13-10-2018 IPR008126 Outer membrane adhesion, Yersinia GO:0005518|GO:0007155|GO:0009405|GO:0019867 Y11_p0221 08896dd5f04995ae3bd5816e4b51ed37 470 PRINTS PR01756 Yersinia outer membrane adhesin signature 346 361 1.1E-40 T 13-10-2018 IPR008126 Outer membrane adhesion, Yersinia GO:0005518|GO:0007155|GO:0009405|GO:0019867 Y11_p0221 08896dd5f04995ae3bd5816e4b51ed37 470 PRINTS PR01756 Yersinia outer membrane adhesin signature 2 18 1.1E-40 T 13-10-2018 IPR008126 Outer membrane adhesion, Yersinia GO:0005518|GO:0007155|GO:0009405|GO:0019867 Y11_p0221 08896dd5f04995ae3bd5816e4b51ed37 470 Gene3D G3DSA:2.150.10.10 32 220 3.5E-70 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_p0221 08896dd5f04995ae3bd5816e4b51ed37 470 Pfam PF03895 YadA-like membrane anchor domain 411 470 7.8E-16 T 13-10-2018 IPR005594 YadA-like, C-terminal Y11_08281 f936a15f37cc1fcd1628aac27c0ec13b 383 PIRSF PIRSF003085 5 378 1.6E-125 T 13-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 Y11_08281 f936a15f37cc1fcd1628aac27c0ec13b 383 Gene3D G3DSA:3.40.50.150 117 376 4.8E-100 T 13-10-2018 Y11_08281 f936a15f37cc1fcd1628aac27c0ec13b 383 SUPERFAMILY SSF53335 117 370 9.81E-78 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_08281 f936a15f37cc1fcd1628aac27c0ec13b 383 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 1.8E-102 T 13-10-2018 Y11_09991 2d46568193abe551f25b3a7101fd19a3 221 SUPERFAMILY SSF51161 11 211 5.96E-46 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Y11_09991 2d46568193abe551f25b3a7101fd19a3 221 Gene3D G3DSA:2.160.10.10 2 221 1.1E-75 T 13-10-2018 Y11_09991 2d46568193abe551f25b3a7101fd19a3 221 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 155 3.4E-8 T 13-10-2018 IPR001451 Hexapeptide repeat Y11_29451 68fe8df791fe7ed569af9ceb1fe390ee 196 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 5 185 6.8E-68 T 13-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Y11_29451 68fe8df791fe7ed569af9ceb1fe390ee 196 Pfam PF12804 MobA-like NTP transferase domain 7 156 1.3E-35 T 13-10-2018 IPR025877 MobA-like NTP transferase Y11_29451 68fe8df791fe7ed569af9ceb1fe390ee 196 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 3 188 28.882 T 13-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Y11_29451 68fe8df791fe7ed569af9ceb1fe390ee 196 SUPERFAMILY SSF53448 1 188 7.93E-35 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_29451 68fe8df791fe7ed569af9ceb1fe390ee 196 Gene3D G3DSA:3.90.550.10 2 194 1.3E-56 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_25561 3aa391762834c72a622068964f75d618 443 Gene3D G3DSA:3.40.50.12170 24 443 2.6E-99 T 13-10-2018 Y11_25561 3aa391762834c72a622068964f75d618 443 PIRSF PIRSF016719 3 321 9.1E-67 T 13-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 Y11_25561 3aa391762834c72a622068964f75d618 443 PIRSF PIRSF016719 349 443 16.0 T 13-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 Y11_25561 3aa391762834c72a622068964f75d618 443 Pfam PF07075 Protein of unknown function (DUF1343) 47 442 5.5E-100 T 13-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 Y11_11371 3ac02f95cd8cb69e8362df5852a41364 301 Gene3D G3DSA:3.40.190.10 165 266 1.0E-50 T 13-10-2018 Y11_11371 3ac02f95cd8cb69e8362df5852a41364 301 Pfam PF03466 LysR substrate binding domain 88 292 7.8E-32 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_11371 3ac02f95cd8cb69e8362df5852a41364 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.3E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_11371 3ac02f95cd8cb69e8362df5852a41364 301 SUPERFAMILY SSF46785 3 83 1.06E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_11371 3ac02f95cd8cb69e8362df5852a41364 301 Gene3D G3DSA:1.10.10.10 2 91 2.1E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_11371 3ac02f95cd8cb69e8362df5852a41364 301 Gene3D G3DSA:3.40.190.10 92 291 1.0E-50 T 13-10-2018 Y11_11371 3ac02f95cd8cb69e8362df5852a41364 301 SUPERFAMILY SSF53850 88 294 1.23E-32 T 13-10-2018 Y11_24711 ba22b45bf04a0c4a7bf15af7b353caa6 141 Gene3D G3DSA:3.30.420.270 63 132 3.3E-28 T 13-10-2018 Y11_24711 ba22b45bf04a0c4a7bf15af7b353caa6 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 2.5E-29 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Y11_24711 ba22b45bf04a0c4a7bf15af7b353caa6 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 16 136 1.0E-64 T 13-10-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0016020|GO:0055085 Y11_09401 49dc2e6bf30a659f3ab782fde122b2e7 98 Gene3D G3DSA:3.30.1730.10 3 86 1.2E-21 T 13-10-2018 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 Y11_09401 49dc2e6bf30a659f3ab782fde122b2e7 98 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 14 82 6.9E-13 T 13-10-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 Y11_09401 49dc2e6bf30a659f3ab782fde122b2e7 98 SUPERFAMILY SSF53167 11 82 1.65E-10 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Y11_14981 6c6c524531257cffda1b1a9659ac291a 372 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 9 192 1.5E-43 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Y11_14981 6c6c524531257cffda1b1a9659ac291a 372 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 202 369 1.8E-22 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Y11_14981 6c6c524531257cffda1b1a9659ac291a 372 SUPERFAMILY SSF53067 12 195 2.23E-39 T 13-10-2018 Y11_14981 6c6c524531257cffda1b1a9659ac291a 372 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 299 319 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Y11_14981 6c6c524531257cffda1b1a9659ac291a 372 Gene3D G3DSA:3.30.420.40 190 372 5.5E-43 T 13-10-2018 Y11_14981 6c6c524531257cffda1b1a9659ac291a 372 SUPERFAMILY SSF53067 194 370 3.21E-34 T 13-10-2018 Y11_14981 6c6c524531257cffda1b1a9659ac291a 372 Gene3D G3DSA:3.30.420.40 2 189 1.4E-45 T 13-10-2018 Y11_19321 881ef5a0d0f3b52aca1b012ecbe52dd5 300 SUPERFAMILY SSF55073 144 298 2.35E-46 T 13-10-2018 IPR029787 Nucleotide cyclase Y11_19321 881ef5a0d0f3b52aca1b012ecbe52dd5 300 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 137 298 5.6E-54 T 13-10-2018 IPR000160 GGDEF domain Y11_19321 881ef5a0d0f3b52aca1b012ecbe52dd5 300 Pfam PF05230 MASE2 domain 2 56 4.5E-20 T 13-10-2018 IPR007894 MASE2 Y11_19321 881ef5a0d0f3b52aca1b012ecbe52dd5 300 Gene3D G3DSA:3.30.70.270 124 299 6.1E-52 T 13-10-2018 Y11_19321 881ef5a0d0f3b52aca1b012ecbe52dd5 300 SMART SM00267 128 299 2.7E-57 T 13-10-2018 IPR000160 GGDEF domain Y11_19321 881ef5a0d0f3b52aca1b012ecbe52dd5 300 Pfam PF00990 Diguanylate cyclase, GGDEF domain 140 295 4.1E-45 T 13-10-2018 IPR000160 GGDEF domain Y11_08131 6b63d2600b4ba9601f0e4a1d76aa999b 273 SUPERFAMILY SSF47454 173 230 6.28E-5 T 13-10-2018 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily GO:0003677|GO:0006355 Y11_08131 6b63d2600b4ba9601f0e4a1d76aa999b 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 272 73.986 T 13-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein Y11_08131 6b63d2600b4ba9601f0e4a1d76aa999b 273 Pfam PF03618 Kinase/pyrophosphorylase 5 263 5.6E-73 T 13-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 Y11_05581 3638c52ccf12f0a827369234f48d99cd 411 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Y11_05581 3638c52ccf12f0a827369234f48d99cd 411 Gene3D G3DSA:3.30.70.360 208 319 3.9E-174 T 13-10-2018 Y11_05581 3638c52ccf12f0a827369234f48d99cd 411 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Y11_05581 3638c52ccf12f0a827369234f48d99cd 411 Pfam PF01546 Peptidase family M20/M25/M40 139 401 1.5E-15 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 Y11_05581 3638c52ccf12f0a827369234f48d99cd 411 SUPERFAMILY SSF55031 208 320 1.78E-41 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Y11_05581 3638c52ccf12f0a827369234f48d99cd 411 PIRSF PIRSF037215 1 408 2.6E-182 T 13-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 Y11_05581 3638c52ccf12f0a827369234f48d99cd 411 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 408 2.3E-155 T 13-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 Y11_05581 3638c52ccf12f0a827369234f48d99cd 411 Pfam PF07687 Peptidase dimerisation domain 206 302 4.2E-11 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain Y11_05581 3638c52ccf12f0a827369234f48d99cd 411 SUPERFAMILY SSF53187 1 406 2.51E-78 T 13-10-2018 Y11_05581 3638c52ccf12f0a827369234f48d99cd 411 Gene3D G3DSA:3.40.630.10 4 400 3.9E-174 T 13-10-2018 Y11_05581 3638c52ccf12f0a827369234f48d99cd 411 Hamap MF_00550 Peptidase T [pepT]. 1 404 54.735 T 13-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 Y11_27511 9eb965e70f349f50a13563d7b10397fa 117 Pfam PF04237 YjbR 12 102 3.7E-21 T 13-10-2018 IPR007351 Uncharacterised protein YjbR Y11_27511 9eb965e70f349f50a13563d7b10397fa 117 SUPERFAMILY SSF142906 1 116 1.57E-37 T 13-10-2018 IPR038056 YjbR-like superfamily Y11_27511 9eb965e70f349f50a13563d7b10397fa 117 Gene3D G3DSA:3.90.1150.30 1 117 2.4E-42 T 13-10-2018 IPR038056 YjbR-like superfamily Y11_35741 a89416c27c42097cd09ba137e07b9efc 181 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 12 162 6.7E-63 T 13-10-2018 IPR010413 Heme utilization carrier protein HutX-like Y11_35741 a89416c27c42097cd09ba137e07b9efc 181 PIRSF PIRSF030840 1 168 3.8E-85 T 13-10-2018 IPR010413 Heme utilization carrier protein HutX-like Y11_35741 a89416c27c42097cd09ba137e07b9efc 181 Pfam PF06228 Haem utilisation ChuX/HutX 28 162 3.0E-32 T 13-10-2018 IPR010413 Heme utilization carrier protein HutX-like Y11_35741 a89416c27c42097cd09ba137e07b9efc 181 SUPERFAMILY SSF144064 11 165 1.96E-49 T 13-10-2018 Y11_35741 a89416c27c42097cd09ba137e07b9efc 181 Gene3D G3DSA:3.40.1570.10 10 178 2.5E-57 T 13-10-2018 Y11_39631 d4fda975e647e123a8cbd386ac9bfbe0 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 221 239 1.3E-44 T 13-10-2018 Y11_39631 d4fda975e647e123a8cbd386ac9bfbe0 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 197 212 1.3E-44 T 13-10-2018 Y11_39631 d4fda975e647e123a8cbd386ac9bfbe0 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 249 266 1.3E-44 T 13-10-2018 Y11_39631 d4fda975e647e123a8cbd386ac9bfbe0 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 286 299 1.3E-44 T 13-10-2018 Y11_39631 d4fda975e647e123a8cbd386ac9bfbe0 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 98 113 1.3E-44 T 13-10-2018 Y11_39631 d4fda975e647e123a8cbd386ac9bfbe0 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 67 85 1.3E-44 T 13-10-2018 Y11_39631 d4fda975e647e123a8cbd386ac9bfbe0 309 Pfam PF01497 Periplasmic binding protein 50 283 3.3E-39 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain Y11_39631 d4fda975e647e123a8cbd386ac9bfbe0 309 Gene3D G3DSA:3.40.50.1980 45 134 2.5E-22 T 13-10-2018 Y11_39631 d4fda975e647e123a8cbd386ac9bfbe0 309 SUPERFAMILY SSF53807 47 302 1.45E-54 T 13-10-2018 Y11_39631 d4fda975e647e123a8cbd386ac9bfbe0 309 Gene3D G3DSA:3.40.50.1980 136 307 1.8E-53 T 13-10-2018 Y11_01781 066309da091eb586589acd5c97170902 280 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 19 261 35.241 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_01781 066309da091eb586589acd5c97170902 280 SUPERFAMILY SSF55120 20 275 1.37E-92 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_01781 066309da091eb586589acd5c97170902 280 PIRSF PIRSF001430 19 272 3.8E-79 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_01781 066309da091eb586589acd5c97170902 280 Gene3D G3DSA:3.30.70.660 123 260 1.5E-51 T 13-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Y11_01781 066309da091eb586589acd5c97170902 280 Pfam PF01416 tRNA pseudouridine synthase 26 120 6.9E-10 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_01781 066309da091eb586589acd5c97170902 280 Pfam PF01416 tRNA pseudouridine synthase 160 262 9.1E-30 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_01781 066309da091eb586589acd5c97170902 280 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 20 256 7.3E-78 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_01781 066309da091eb586589acd5c97170902 280 Gene3D G3DSA:3.30.70.580 17 122 1.8E-39 T 13-10-2018 Y11_12521 d0ca8ffccabac118e44c064b8af15a46 269 SUPERFAMILY SSF48452 190 258 1.94E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_12521 d0ca8ffccabac118e44c064b8af15a46 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 8.6E-42 T 13-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Y11_12521 d0ca8ffccabac118e44c064b8af15a46 269 Pfam PF13371 Tetratricopeptide repeat 187 258 1.4E-25 T 13-10-2018 Y11_41181 19e928e90fc0821e1b91e139b80cab57 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 8.1E-64 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Y11_41181 19e928e90fc0821e1b91e139b80cab57 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 51.039 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Y11_41181 19e928e90fc0821e1b91e139b80cab57 319 Gene3D G3DSA:3.90.226.10 4 319 3.5E-123 T 13-10-2018 Y11_41181 19e928e90fc0821e1b91e139b80cab57 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 5.6E-172 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Y11_41181 19e928e90fc0821e1b91e139b80cab57 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.2E-50 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Y11_41181 19e928e90fc0821e1b91e139b80cab57 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.2E-50 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Y11_41181 19e928e90fc0821e1b91e139b80cab57 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.2E-50 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Y11_41181 19e928e90fc0821e1b91e139b80cab57 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.2E-50 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Y11_41181 19e928e90fc0821e1b91e139b80cab57 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.2E-50 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Y11_41181 19e928e90fc0821e1b91e139b80cab57 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.2E-50 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Y11_41181 19e928e90fc0821e1b91e139b80cab57 319 SUPERFAMILY SSF52096 5 318 1.79E-105 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Y11_34991 2047e8d86f4cd4650c5bc9672e42e71a 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 4.8E-18 T 13-10-2018 IPR010035 ThiS, thiamine-biosynthesis Y11_34991 2047e8d86f4cd4650c5bc9672e42e71a 66 Gene3D G3DSA:3.10.20.30 1 66 4.2E-19 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Y11_34991 2047e8d86f4cd4650c5bc9672e42e71a 66 Pfam PF02597 ThiS family 5 66 2.2E-14 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Y11_34991 2047e8d86f4cd4650c5bc9672e42e71a 66 SUPERFAMILY SSF54285 2 66 6.54E-17 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Y11_21501 69594fb044a63e98ce6996a37e6bc139 815 SUPERFAMILY SSF47203 360 507 6.44E-20 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Y11_21501 69594fb044a63e98ce6996a37e6bc139 815 SUPERFAMILY SSF56645 119 355 3.4E-45 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Y11_21501 69594fb044a63e98ce6996a37e6bc139 815 Gene3D G3DSA:1.10.540.10 122 235 5.9E-100 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Y11_21501 69594fb044a63e98ce6996a37e6bc139 815 Gene3D G3DSA:2.40.110.10 236 359 5.9E-100 T 13-10-2018 Y11_21501 69594fb044a63e98ce6996a37e6bc139 815 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 1.8E-116 T 13-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 Y11_21501 69594fb044a63e98ce6996a37e6bc139 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 233 1.6E-16 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Y11_21501 69594fb044a63e98ce6996a37e6bc139 815 Gene3D G3DSA:1.20.140.10 360 507 5.9E-100 T 13-10-2018 Y11_21501 69594fb044a63e98ce6996a37e6bc139 815 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 9.0E-9 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Y11_21501 69594fb044a63e98ce6996a37e6bc139 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 507 2.5E-10 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Y11_04861 6e720b8daa8adb6cc1c77fec29a9e6a8 136 Gene3D G3DSA:1.10.8.640 20 105 3.4E-33 T 13-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily Y11_04861 6e720b8daa8adb6cc1c77fec29a9e6a8 136 Pfam PF03918 Cytochrome C biogenesis protein 8 126 3.6E-44 T 13-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family Y11_04861 6e720b8daa8adb6cc1c77fec29a9e6a8 136 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 3 118 1.5E-49 T 13-10-2018 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF Y11_24301 c161889b456892fa41ed7d805693af93 243 Pfam PF00460 Flagella basal body rod protein 5 35 2.6E-8 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Y11_24301 c161889b456892fa41ed7d805693af93 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 119 8.3E-30 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Y11_24301 c161889b456892fa41ed7d805693af93 243 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 220 6.4E-55 T 13-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 Y11_24301 c161889b456892fa41ed7d805693af93 243 SUPERFAMILY SSF117143 78 176 1.7E-9 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Y11_24301 c161889b456892fa41ed7d805693af93 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 168 238 9.6E-16 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Y11_10101 c53c4d70a098f8dcdc973f636a24e10b 327 PIRSF PIRSF002816 2 326 3.6E-149 T 13-10-2018 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 Y11_10101 c53c4d70a098f8dcdc973f636a24e10b 327 Gene3D G3DSA:3.40.50.2300 27 308 2.4E-132 T 13-10-2018 Y11_10101 c53c4d70a098f8dcdc973f636a24e10b 327 SUPERFAMILY SSF53822 26 324 1.46E-68 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_10101 c53c4d70a098f8dcdc973f636a24e10b 327 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 26 319 7.0E-85 T 13-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain Y11_10101 c53c4d70a098f8dcdc973f636a24e10b 327 Gene3D G3DSA:3.40.50.2300 132 317 2.4E-132 T 13-10-2018 Y11_18201 280669654b2af9d3603a2c127eb98c88 333 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 327 1.5E-93 T 13-10-2018 IPR019405 Lactonase, 7-bladed beta propeller Y11_18201 280669654b2af9d3603a2c127eb98c88 333 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 57.72 T 13-10-2018 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 Y11_18201 280669654b2af9d3603a2c127eb98c88 333 Gene3D G3DSA:2.130.10.10 1 332 3.0E-120 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Y11_18201 280669654b2af9d3603a2c127eb98c88 333 SUPERFAMILY SSF50974 4 290 8.76E-53 T 13-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 Y11_30421 ae406f8221dfddd724e7f519b8f980dc 139 Gene3D G3DSA:3.40.50.1010 3 138 1.8E-32 T 13-10-2018 Y11_30421 ae406f8221dfddd724e7f519b8f980dc 139 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 6 136 9.832 T 13-10-2018 IPR022907 VapC family GO:0004540 Y11_30421 ae406f8221dfddd724e7f519b8f980dc 139 SUPERFAMILY SSF88723 2 138 1.51E-30 T 13-10-2018 IPR029060 PIN-like domain superfamily Y11_30421 ae406f8221dfddd724e7f519b8f980dc 139 Pfam PF01850 PIN domain 6 131 3.2E-12 T 13-10-2018 IPR002716 PIN domain Y11_02891 eb10d8f7752b315f98f92bd6496760e7 508 Pfam PF02378 Phosphotransferase system, EIIC 107 425 1.6E-30 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Y11_02891 eb10d8f7752b315f98f92bd6496760e7 508 Pfam PF00367 phosphotransferase system, EIIB 10 43 4.4E-13 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Y11_02891 eb10d8f7752b315f98f92bd6496760e7 508 SUPERFAMILY SSF55604 9 83 7.59E-20 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_02891 eb10d8f7752b315f98f92bd6496760e7 508 Gene3D G3DSA:3.30.1360.60 2 79 1.4E-24 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Y11_41411 5a5a11ef2c1a9802219acd1540f8637e 394 SUPERFAMILY SSF103473 3 383 4.97E-64 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_41411 5a5a11ef2c1a9802219acd1540f8637e 394 Gene3D G3DSA:1.20.1250.20 3 379 1.5E-53 T 13-10-2018 Y11_41411 5a5a11ef2c1a9802219acd1540f8637e 394 Pfam PF07690 Major Facilitator Superfamily 9 320 1.8E-41 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_00611 d247773326d79bf3c1b3e9985e1273c3 342 SUPERFAMILY SSF53850 29 336 1.51E-81 T 13-10-2018 Y11_00611 d247773326d79bf3c1b3e9985e1273c3 342 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 25 336 9.9E-156 T 13-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 Y11_00611 d247773326d79bf3c1b3e9985e1273c3 342 Gene3D G3DSA:3.40.190.10 124 335 4.3E-120 T 13-10-2018 Y11_00611 d247773326d79bf3c1b3e9985e1273c3 342 Gene3D G3DSA:3.40.190.10 36 305 4.3E-120 T 13-10-2018 Y11_00611 d247773326d79bf3c1b3e9985e1273c3 342 Pfam PF13531 Bacterial extracellular solute-binding protein 43 290 2.8E-42 T 13-10-2018 Y11_10721 3dbbc48928eecab62afe1d0cc8616b01 206 Pfam PF01300 Telomere recombination 23 198 1.3E-45 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 Y11_10721 3dbbc48928eecab62afe1d0cc8616b01 206 SUPERFAMILY SSF55821 1 203 5.49E-65 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Y11_10721 3dbbc48928eecab62afe1d0cc8616b01 206 Gene3D G3DSA:3.90.870.10 1 206 5.9E-69 T 13-10-2018 Y11_10721 3dbbc48928eecab62afe1d0cc8616b01 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 1.9E-72 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 Y11_10551 702c21e47acbcb64b7fa643025cca4d9 95 Gene3D G3DSA:1.10.1220.10 1 47 2.8E-7 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Y11_10551 702c21e47acbcb64b7fa643025cca4d9 95 SUPERFAMILY SSF47598 1 43 3.19E-8 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Y11_p0451 79e7a36b3e6eabf461919137b6f9715c 80 Gene3D G3DSA:1.10.8.1250 10 79 2.5E-15 T 13-10-2018 IPR038296 Antitoxin ParD superfamily Y11_p0451 79e7a36b3e6eabf461919137b6f9715c 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 5 72 4.1E-26 T 13-10-2018 IPR022789 Antitoxin ParD Y11_p0451 79e7a36b3e6eabf461919137b6f9715c 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 60 4.3E-18 T 13-10-2018 IPR022789 Antitoxin ParD Y11_p0451 79e7a36b3e6eabf461919137b6f9715c 80 SUPERFAMILY SSF47598 4 47 1.22E-10 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Y11_07331 60bd7e9a06c026565aa561af272470e5 474 SUPERFAMILY SSF103473 19 470 6.8E-62 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_07331 60bd7e9a06c026565aa561af272470e5 474 Pfam PF07690 Major Facilitator Superfamily 30 417 2.0E-49 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_07331 60bd7e9a06c026565aa561af272470e5 474 Gene3D G3DSA:1.20.1720.10 22 237 3.5E-46 T 13-10-2018 Y11_07331 60bd7e9a06c026565aa561af272470e5 474 Gene3D G3DSA:1.20.1250.20 263 472 1.1E-17 T 13-10-2018 Y11_07331 60bd7e9a06c026565aa561af272470e5 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 270 295 2.4E-13 T 13-10-2018 Y11_07331 60bd7e9a06c026565aa561af272470e5 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 408 427 2.4E-13 T 13-10-2018 Y11_07331 60bd7e9a06c026565aa561af272470e5 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 24 48 2.4E-13 T 13-10-2018 Y11_07331 60bd7e9a06c026565aa561af272470e5 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 115 135 2.4E-13 T 13-10-2018 Y11_07331 60bd7e9a06c026565aa561af272470e5 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 169 2.4E-13 T 13-10-2018 Y11_17021 c9b8cbd4b5027f92fb1ce86d351a790d 317 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 203 216 - T 13-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17021 c9b8cbd4b5027f92fb1ce86d351a790d 317 Pfam PF00146 NADH dehydrogenase 19 311 2.5E-51 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_p0641 e8885dcd4b1c4869b9cf1a52a7b3f69a 223 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 1 217 3.8E-112 T 13-10-2018 IPR032034 Yop protein translocation protein D, periplasmic domain Y11_p0641 e8885dcd4b1c4869b9cf1a52a7b3f69a 223 Gene3D G3DSA:3.30.70.1770 89 152 8.8E-38 T 13-10-2018 Y11_p0641 e8885dcd4b1c4869b9cf1a52a7b3f69a 223 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 2 217 3.5E-64 T 13-10-2018 IPR012843 Type III secretion system YscD/HrpQ Y11_20481 bb820f5ac4f86189c38d599e7f46eca5 140 Gene3D G3DSA:1.10.150.280 67 139 1.4E-19 T 13-10-2018 Y11_20481 bb820f5ac4f86189c38d599e7f46eca5 140 SMART SM00278 88 107 0.34 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Y11_20481 bb820f5ac4f86189c38d599e7f46eca5 140 SMART SM00278 118 137 130.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Y11_20481 bb820f5ac4f86189c38d599e7f46eca5 140 Pfam PF12836 Helix-hairpin-helix motif 76 139 2.7E-21 T 13-10-2018 Y11_20481 bb820f5ac4f86189c38d599e7f46eca5 140 SUPERFAMILY SSF47781 74 137 1.67E-24 T 13-10-2018 IPR010994 RuvA domain 2-like Y11_20481 bb820f5ac4f86189c38d599e7f46eca5 140 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 75 138 7.0E-26 T 13-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain Y11_09791 5f87fd7606ad533e0e5daebbd0a196a9 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 22.946 T 13-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 Y11_09791 5f87fd7606ad533e0e5daebbd0a196a9 108 SUPERFAMILY SSF103481 7 105 8.37E-5 T 13-10-2018 Y11_09791 5f87fd7606ad533e0e5daebbd0a196a9 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 106 1.4E-42 T 13-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 Y11_34811 d6a2b54126907b6742702abf5f35b7c6 185 Pfam PF02371 Transposase IS116/IS110/IS902 family 62 137 6.9E-22 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_08811 f4b0d13100e27bd966df7a52797d160c 235 Gene3D G3DSA:3.40.630.10 2 233 5.8E-54 T 13-10-2018 Y11_08811 f4b0d13100e27bd966df7a52797d160c 235 SUPERFAMILY SSF53187 18 214 4.63E-32 T 13-10-2018 Y11_08811 f4b0d13100e27bd966df7a52797d160c 235 Pfam PF00246 Zinc carboxypeptidase 74 157 1.1E-10 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Y11_05641 b71403a61014711e112e600b0dc6f9ec 208 Pfam PF04356 Protein of unknown function (DUF489) 7 198 6.2E-77 T 13-10-2018 IPR007451 High frequency lysogenization protein HflD Y11_05641 b71403a61014711e112e600b0dc6f9ec 208 Gene3D G3DSA:1.10.3890.10 1 208 1.4E-79 T 13-10-2018 IPR035932 HflD-like superfamily Y11_05641 b71403a61014711e112e600b0dc6f9ec 208 SUPERFAMILY SSF101322 2 207 8.76E-82 T 13-10-2018 IPR035932 HflD-like superfamily Y11_05641 b71403a61014711e112e600b0dc6f9ec 208 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 206 36.754 T 13-10-2018 IPR007451 High frequency lysogenization protein HflD Y11_05641 b71403a61014711e112e600b0dc6f9ec 208 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 197 9.0E-96 T 13-10-2018 Y11_36821 55155b3da9f9318ad38445f8955b2712 438 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 9 433 34.259 T 13-10-2018 IPR021144 Uncharacterised protein family UPF0597 Y11_36821 55155b3da9f9318ad38445f8955b2712 438 PIRSF PIRSF006054 7 435 3.9E-160 T 13-10-2018 IPR021144 Uncharacterised protein family UPF0597 Y11_36821 55155b3da9f9318ad38445f8955b2712 438 Pfam PF03313 Serine dehydratase alpha chain 187 428 1.1E-45 T 13-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Y11_30431 71a31b03a64599584d98757dc476e993 223 SUPERFAMILY SSF50800 3 222 3.71E-73 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Y11_30431 71a31b03a64599584d98757dc476e993 223 Pfam PF03475 3-alpha domain 168 211 2.0E-15 T 13-10-2018 IPR005163 3-alpha domain Y11_30431 71a31b03a64599584d98757dc476e993 223 Gene3D G3DSA:2.40.33.20 1 223 3.0E-77 T 13-10-2018 Y11_30431 71a31b03a64599584d98757dc476e993 223 Pfam PF03473 MOSC domain 46 159 1.9E-20 T 13-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 Y11_09171 850b0e2c13564616015e69d9de16b473 157 Hamap MF_01896 DNA gyrase inhibitor [sbmC]. 1 156 38.33 T 13-10-2018 IPR024911 DNA gyrase inhibitor GyrI GO:0008657 Y11_09171 850b0e2c13564616015e69d9de16b473 157 SMART SM00871 1 154 4.4E-34 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding Y11_09171 850b0e2c13564616015e69d9de16b473 157 Gene3D G3DSA:3.20.80.10 1 157 9.1E-39 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Y11_09171 850b0e2c13564616015e69d9de16b473 157 SUPERFAMILY SSF55136 1 155 3.14E-36 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Y11_09171 850b0e2c13564616015e69d9de16b473 157 Pfam PF06445 GyrI-like small molecule binding domain 1 150 9.4E-28 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain Y11_41791 5a832a281113545c0f959d4835ce49bb 221 SUPERFAMILY SSF52540 3 194 1.03E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_41791 5a832a281113545c0f959d4835ce49bb 221 Pfam PF00005 ABC transporter 18 150 1.0E-15 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_41791 5a832a281113545c0f959d4835ce49bb 221 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_41791 5a832a281113545c0f959d4835ce49bb 221 SMART SM00382 26 199 1.7E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_41791 5a832a281113545c0f959d4835ce49bb 221 Gene3D G3DSA:3.40.50.300 3 200 1.2E-40 T 13-10-2018 Y11_12091 baf5fce1a252023449e4fe318c45105e 212 SUPERFAMILY SSF89623 1 161 1.7E-35 T 13-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Y11_12091 baf5fce1a252023449e4fe318c45105e 212 Pfam PF02502 Ribose/Galactose Isomerase 3 142 3.1E-29 T 13-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Y11_12091 baf5fce1a252023449e4fe318c45105e 212 Pfam PF12408 Ribose-5-phosphate isomerase 164 210 2.3E-23 T 13-10-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal Y11_12091 baf5fce1a252023449e4fe318c45105e 212 Gene3D G3DSA:3.40.1400.10 1 212 6.8E-97 T 13-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Y11_37711 774006ae7be7bff635a91ddda41c6122 364 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Y11_37711 774006ae7be7bff635a91ddda41c6122 364 SUPERFAMILY SSF56796 2 353 7.33E-91 T 13-10-2018 Y11_37711 774006ae7be7bff635a91ddda41c6122 364 PIRSF PIRSF000112 1 360 1.4E-95 T 13-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 Y11_37711 774006ae7be7bff635a91ddda41c6122 364 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Y11_37711 774006ae7be7bff635a91ddda41c6122 364 Gene3D G3DSA:1.20.1090.10 160 364 4.2E-80 T 13-10-2018 Y11_37711 774006ae7be7bff635a91ddda41c6122 364 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 9.8E-70 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Y11_37711 774006ae7be7bff635a91ddda41c6122 364 Gene3D G3DSA:3.40.50.1970 2 159 8.9E-45 T 13-10-2018 Y11_15271 777b03b829f809271803a603c91c4b1a 249 PRINTS PR01399 Enterobactin synthetase component D signature 60 80 6.2E-9 T 13-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 Y11_15271 777b03b829f809271803a603c91c4b1a 249 PRINTS PR01399 Enterobactin synthetase component D signature 90 108 6.2E-9 T 13-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 Y11_15271 777b03b829f809271803a603c91c4b1a 249 Gene3D G3DSA:3.90.470.20 132 239 5.1E-5 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Y11_15271 777b03b829f809271803a603c91c4b1a 249 SUPERFAMILY SSF56214 133 217 8.2E-14 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Y11_15271 777b03b829f809271803a603c91c4b1a 249 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 134 220 4.9E-11 T 13-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Y11_09511 5b2abcaeae87424266d686b59a544e17 240 Gene3D G3DSA:1.10.3720.10 17 234 2.2E-38 T 13-10-2018 IPR035906 MetI-like superfamily Y11_09511 5b2abcaeae87424266d686b59a544e17 240 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 22 88 9.0E-14 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Y11_09511 5b2abcaeae87424266d686b59a544e17 240 SUPERFAMILY SSF161098 21 219 6.67E-31 T 13-10-2018 IPR035906 MetI-like superfamily Y11_09511 5b2abcaeae87424266d686b59a544e17 240 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 232 2.0E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_30501 f8d5dbfa75f509752ad839b7b26f199c 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 308 49.892 T 13-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 Y11_30501 f8d5dbfa75f509752ad839b7b26f199c 309 PIRSF PIRSF018296 1 309 2.8E-134 T 13-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 Y11_30501 f8d5dbfa75f509752ad839b7b26f199c 309 Gene3D G3DSA:3.90.1670.10 26 309 6.7E-92 T 13-10-2018 IPR024064 FdhE-like superfamily Y11_30501 f8d5dbfa75f509752ad839b7b26f199c 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 23 306 1.1E-113 T 13-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 Y11_30501 f8d5dbfa75f509752ad839b7b26f199c 309 SUPERFAMILY SSF144020 26 308 1.96E-95 T 13-10-2018 IPR024064 FdhE-like superfamily Y11_30501 f8d5dbfa75f509752ad839b7b26f199c 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 307 5.7E-120 T 13-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 Y11_30911 2f3a24f2f2cd860a458667e1267e85ec 107 Pfam PF13673 Acetyltransferase (GNAT) domain 29 89 3.8E-10 T 13-10-2018 IPR000182 GNAT domain Y11_30911 2f3a24f2f2cd860a458667e1267e85ec 107 SUPERFAMILY SSF55729 7 90 5.4E-15 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_30911 2f3a24f2f2cd860a458667e1267e85ec 107 Gene3D G3DSA:3.40.630.30 4 107 3.1E-14 T 13-10-2018 Y11_04931 7ca2ea1bbb84af42df4986d09deb068b 349 Pfam PF01548 Transposase 16 156 3.6E-14 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_04931 7ca2ea1bbb84af42df4986d09deb068b 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_42611 d40c2292e20a623c0ec16d21c10caed9 299 Pfam PF14503 YhfZ C-terminal domain 76 299 1.0E-82 T 13-10-2018 IPR032791 Uncharacterised protein YhfZ, C-terminal domain Y11_42611 d40c2292e20a623c0ec16d21c10caed9 299 Pfam PF14502 Helix-turn-helix domain 25 71 1.7E-22 T 13-10-2018 Y11_42611 d40c2292e20a623c0ec16d21c10caed9 299 Gene3D G3DSA:1.10.10.10 19 76 2.0E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_42611 d40c2292e20a623c0ec16d21c10caed9 299 SUPERFAMILY SSF53850 74 299 1.02E-83 T 13-10-2018 Y11_42611 d40c2292e20a623c0ec16d21c10caed9 299 Gene3D G3DSA:3.40.190.10 91 299 3.1E-68 T 13-10-2018 Y11_42611 d40c2292e20a623c0ec16d21c10caed9 299 SUPERFAMILY SSF46785 18 71 8.65E-7 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_42611 d40c2292e20a623c0ec16d21c10caed9 299 Gene3D G3DSA:3.40.190.10 167 256 3.1E-68 T 13-10-2018 Y11_07971 a10d3ceb49a3dc01781bede0a6937e8f 252 Gene3D G3DSA:3.40.50.300 2 251 7.5E-54 T 13-10-2018 Y11_07971 a10d3ceb49a3dc01781bede0a6937e8f 252 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_07971 a10d3ceb49a3dc01781bede0a6937e8f 252 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 2 250 44.643 T 13-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 Y11_07971 a10d3ceb49a3dc01781bede0a6937e8f 252 Pfam PF00005 ABC transporter 17 163 4.6E-17 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_07971 a10d3ceb49a3dc01781bede0a6937e8f 252 SUPERFAMILY SSF52540 14 227 3.36E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_07971 a10d3ceb49a3dc01781bede0a6937e8f 252 SMART SM00382 23 212 7.2E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_15711 18340dfb71604832c66fc1dea7407773 200 SUPERFAMILY SSF49401 54 200 4.72E-21 T 13-10-2018 IPR008966 Adhesion domain superfamily Y11_15711 18340dfb71604832c66fc1dea7407773 200 Gene3D G3DSA:2.60.40.1090 44 199 1.8E-23 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Y11_15711 18340dfb71604832c66fc1dea7407773 200 Pfam PF00419 Fimbrial protein 47 199 1.9E-12 T 13-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 Y11_18551 6a7692ae836b7dd50183d4fa529a2b4b 522 PIRSF PIRSF006446 1 521 3.5E-139 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Y11_18551 6a7692ae836b7dd50183d4fa529a2b4b 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 2.4E-171 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Y11_25111 41861222566c6de5dd3ef8e13a957ee3 161 Pfam PF01548 Transposase 16 156 5.7E-16 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_32541 dec08940d57334c422fd4d94ffa1801a 76 Gene3D G3DSA:3.90.1150.10 1 74 4.7E-18 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_32541 dec08940d57334c422fd4d94ffa1801a 76 SUPERFAMILY SSF53383 2 71 1.1E-10 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_32541 dec08940d57334c422fd4d94ffa1801a 76 Pfam PF00202 Aminotransferase class-III 2 70 6.4E-14 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Y11_08591 5617501c3bb049c295ecb7e394dd78e4 303 Gene3D G3DSA:3.40.190.290 92 302 7.7E-28 T 13-10-2018 Y11_08591 5617501c3bb049c295ecb7e394dd78e4 303 Pfam PF03466 LysR substrate binding domain 89 298 3.8E-30 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_08591 5617501c3bb049c295ecb7e394dd78e4 303 Gene3D G3DSA:1.10.10.10 1 85 4.3E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_08591 5617501c3bb049c295ecb7e394dd78e4 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.3E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_08591 5617501c3bb049c295ecb7e394dd78e4 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.3E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_08591 5617501c3bb049c295ecb7e394dd78e4 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.3E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_08591 5617501c3bb049c295ecb7e394dd78e4 303 SUPERFAMILY SSF46785 3 89 3.74E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_08591 5617501c3bb049c295ecb7e394dd78e4 303 SUPERFAMILY SSF53850 90 300 1.12E-28 T 13-10-2018 Y11_08591 5617501c3bb049c295ecb7e394dd78e4 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.2E-13 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_19401 65297f0762f2998c98f2f69df8626e12 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 2.9E-14 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Y11_19401 65297f0762f2998c98f2f69df8626e12 95 SUPERFAMILY SSF54909 1 91 3.01E-27 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Y11_19401 65297f0762f2998c98f2f69df8626e12 95 Gene3D G3DSA:3.30.70.100 2 94 4.5E-34 T 13-10-2018 Y11_32331 223a54596d7bfdc0ef12acb32959857c 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 13-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Y11_32331 223a54596d7bfdc0ef12acb32959857c 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.478 T 13-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Y11_32331 223a54596d7bfdc0ef12acb32959857c 173 SUPERFAMILY SSF52540 4 170 7.83E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_32331 223a54596d7bfdc0ef12acb32959857c 173 Gene3D G3DSA:3.40.50.300 1 173 1.7E-58 T 13-10-2018 Y11_32331 223a54596d7bfdc0ef12acb32959857c 173 Pfam PF01202 Shikimate kinase 13 170 7.5E-57 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Y11_32331 223a54596d7bfdc0ef12acb32959857c 173 PRINTS PR01100 Shikimate kinase family signature 59 67 4.3E-29 T 13-10-2018 Y11_32331 223a54596d7bfdc0ef12acb32959857c 173 PRINTS PR01100 Shikimate kinase family signature 31 44 4.3E-29 T 13-10-2018 Y11_32331 223a54596d7bfdc0ef12acb32959857c 173 PRINTS PR01100 Shikimate kinase family signature 98 115 4.3E-29 T 13-10-2018 Y11_32331 223a54596d7bfdc0ef12acb32959857c 173 PRINTS PR01100 Shikimate kinase family signature 7 22 4.3E-29 T 13-10-2018 Y11_32331 223a54596d7bfdc0ef12acb32959857c 173 PRINTS PR01100 Shikimate kinase family signature 77 86 4.3E-29 T 13-10-2018 Y11_38321 41f24fa87406547d9e15d6f6c97be707 309 Hamap MF_00384 Homoserine kinase [thrB]. 4 308 28.232 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Y11_38321 41f24fa87406547d9e15d6f6c97be707 309 Gene3D G3DSA:3.30.230.10 4 167 6.7E-100 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y11_38321 41f24fa87406547d9e15d6f6c97be707 309 Gene3D G3DSA:3.30.70.890 168 277 6.7E-100 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Y11_38321 41f24fa87406547d9e15d6f6c97be707 309 PIRSF PIRSF000676 1 308 1.1E-82 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Y11_38321 41f24fa87406547d9e15d6f6c97be707 309 PRINTS PR00958 Homoserine kinase signature 254 269 1.3E-32 T 13-10-2018 Y11_38321 41f24fa87406547d9e15d6f6c97be707 309 PRINTS PR00958 Homoserine kinase signature 175 192 1.3E-32 T 13-10-2018 Y11_38321 41f24fa87406547d9e15d6f6c97be707 309 PRINTS PR00958 Homoserine kinase signature 137 150 1.3E-32 T 13-10-2018 Y11_38321 41f24fa87406547d9e15d6f6c97be707 309 PRINTS PR00958 Homoserine kinase signature 9 24 1.3E-32 T 13-10-2018 Y11_38321 41f24fa87406547d9e15d6f6c97be707 309 PRINTS PR00958 Homoserine kinase signature 97 112 1.3E-32 T 13-10-2018 Y11_38321 41f24fa87406547d9e15d6f6c97be707 309 SUPERFAMILY SSF54211 1 178 1.82E-32 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_38321 41f24fa87406547d9e15d6f6c97be707 309 Pfam PF08544 GHMP kinases C terminal 218 286 1.3E-8 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain Y11_38321 41f24fa87406547d9e15d6f6c97be707 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 307 4.0E-112 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Y11_38321 41f24fa87406547d9e15d6f6c97be707 309 Pfam PF00288 GHMP kinases N terminal domain 84 150 3.9E-14 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Y11_38321 41f24fa87406547d9e15d6f6c97be707 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 13-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 Y11_38321 41f24fa87406547d9e15d6f6c97be707 309 SUPERFAMILY SSF55060 173 289 1.44E-33 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Y11_37061 f560bf6addff0d50aac6f6a8d9651adf 244 Pfam PF00005 ABC transporter 33 187 2.4E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_37061 f560bf6addff0d50aac6f6a8d9651adf 244 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_37061 f560bf6addff0d50aac6f6a8d9651adf 244 SMART SM00382 42 235 4.7E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_37061 f560bf6addff0d50aac6f6a8d9651adf 244 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 11 232 9.7E-109 T 13-10-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Y11_37061 f560bf6addff0d50aac6f6a8d9651adf 244 Gene3D G3DSA:3.40.50.300 9 236 1.6E-46 T 13-10-2018 Y11_37061 f560bf6addff0d50aac6f6a8d9651adf 244 SUPERFAMILY SSF52540 11 232 2.13E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_31111 0da1167dd5396a0e94be282cdfaddadd 331 SUPERFAMILY SSF161098 81 314 3.43E-22 T 13-10-2018 IPR035906 MetI-like superfamily Y11_31111 0da1167dd5396a0e94be282cdfaddadd 331 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 328 3.4E-47 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_32691 179aa58c35df3059cae9bae8583a3df3 329 Pfam PF00535 Glycosyl transferase family 2 7 122 3.9E-28 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Y11_32691 179aa58c35df3059cae9bae8583a3df3 329 Gene3D G3DSA:3.90.550.10 4 205 1.2E-41 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_32691 179aa58c35df3059cae9bae8583a3df3 329 SUPERFAMILY SSF53448 6 236 2.63E-47 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_24761 575fbe652f7305f99c66414594a78619 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 359 3.3E-89 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Y11_24761 575fbe652f7305f99c66414594a78619 385 Gene3D G3DSA:3.40.50.1970 1 182 9.0E-49 T 13-10-2018 Y11_24761 575fbe652f7305f99c66414594a78619 385 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 262 282 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Y11_24761 575fbe652f7305f99c66414594a78619 385 Gene3D G3DSA:1.20.1090.10 183 385 3.0E-47 T 13-10-2018 Y11_24761 575fbe652f7305f99c66414594a78619 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Y11_24761 575fbe652f7305f99c66414594a78619 385 SUPERFAMILY SSF56796 1 384 2.09E-107 T 13-10-2018 Y11_15781 e355413c813a7570026f12eab7db7556 341 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 23 321 1.6E-94 T 13-10-2018 IPR010732 Type VI secretion, TssG-like Y11_15781 e355413c813a7570026f12eab7db7556 341 Pfam PF06996 Type VI secretion, TssG 23 320 1.5E-84 T 13-10-2018 IPR010732 Type VI secretion, TssG-like Y11_29161 95887177c283af69ca7efab5965e76e3 91 Pfam PF01192 RNA polymerase Rpb6 10 60 8.2E-17 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Y11_29161 95887177c283af69ca7efab5965e76e3 91 Gene3D G3DSA:3.90.940.10 1 91 1.3E-30 T 13-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Y11_29161 95887177c283af69ca7efab5965e76e3 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 2.1E-28 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_29161 95887177c283af69ca7efab5965e76e3 91 SMART SM01409 8 61 1.0E-16 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Y11_29161 95887177c283af69ca7efab5965e76e3 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.134 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Y11_29161 95887177c283af69ca7efab5965e76e3 91 SUPERFAMILY SSF63562 1 79 2.44E-25 T 13-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Y11_15121 78f040b9c1f14772b69a259fb4757f14 554 SMART SM00953 280 441 1.0E-15 T 13-10-2018 IPR014914 RES domain Y11_15121 78f040b9c1f14772b69a259fb4757f14 554 Pfam PF08808 RES domain 283 438 9.4E-22 T 13-10-2018 IPR014914 RES domain Y11_06781 2b9f8e9aa6284e3d08643e2c0cddf68d 163 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 148 2.3E-30 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal Y11_06781 2b9f8e9aa6284e3d08643e2c0cddf68d 163 SMART SM01007 8 159 3.5E-28 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal Y11_06781 2b9f8e9aa6284e3d08643e2c0cddf68d 163 SUPERFAMILY SSF53639 1 157 6.47E-44 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Y11_06781 2b9f8e9aa6284e3d08643e2c0cddf68d 163 Gene3D G3DSA:3.40.225.10 2 158 1.7E-40 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Y11_00021 4f4e90ae0e11a58ee1c069f42f084426 508 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 22 505 40.842 T 13-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 Y11_00021 4f4e90ae0e11a58ee1c069f42f084426 508 Pfam PF01435 Peptidase family M48 92 279 2.8E-28 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Y11_00021 4f4e90ae0e11a58ee1c069f42f084426 508 Pfam PF14559 Tetratricopeptide repeat 374 439 3.2E-8 T 13-10-2018 Y11_00021 4f4e90ae0e11a58ee1c069f42f084426 508 SUPERFAMILY SSF48452 333 447 9.22E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_00021 4f4e90ae0e11a58ee1c069f42f084426 508 Gene3D G3DSA:3.30.2010.10 96 171 1.4E-6 T 13-10-2018 Y11_00021 4f4e90ae0e11a58ee1c069f42f084426 508 Gene3D G3DSA:1.25.40.10 273 506 1.1E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_00691 93c3887a32fe0597012d67fa9f9b3a28 76 Gene3D G3DSA:3.40.50.12740 1 75 1.3E-16 T 13-10-2018 Y11_00691 93c3887a32fe0597012d67fa9f9b3a28 76 SUPERFAMILY SSF52172 1 71 1.42E-17 T 13-10-2018 IPR011006 CheY-like superfamily Y11_00691 93c3887a32fe0597012d67fa9f9b3a28 76 Pfam PF00072 Response regulator receiver domain 3 70 8.2E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_14451 9c2e0465991a1b3197df98d5cca67b53 226 SMART SM00858 102 164 3.1E-11 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Y11_14451 9c2e0465991a1b3197df98d5cca67b53 226 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 92 224 1.4E-40 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Y11_14451 9c2e0465991a1b3197df98d5cca67b53 226 Gene3D G3DSA:2.30.30.760 167 226 2.8E-25 T 13-10-2018 Y11_14451 9c2e0465991a1b3197df98d5cca67b53 226 Pfam PF13144 Chaperone for flagella basal body P-ring formation 32 224 1.1E-49 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Y11_05141 b91d9709b033f4bdba5b5ddee3f68e8a 194 SMART SM00421 130 187 8.8E-7 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_05141 b91d9709b033f4bdba5b5ddee3f68e8a 194 Pfam PF00196 Bacterial regulatory proteins, luxR family 133 183 2.4E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_05141 b91d9709b033f4bdba5b5ddee3f68e8a 194 SUPERFAMILY SSF46894 127 188 3.74E-14 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_05141 b91d9709b033f4bdba5b5ddee3f68e8a 194 Gene3D G3DSA:1.10.10.10 100 190 8.7E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_17151 c61ef4ed606938be66fba357740a2fe7 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 8.3E-49 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_33251 d81518f401b6f4dfa01fb9109e1a711f 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 5.7E-60 T 13-10-2018 IPR007456 Smg Y11_33251 d81518f401b6f4dfa01fb9109e1a711f 157 Hamap MF_00598 Protein Smg [smg]. 1 157 32.094 T 13-10-2018 IPR007456 Smg Y11_08261 92105b9cd6c0f2c9ac3a3e31526e038f 457 PIRSF PIRSF006603 5 456 3.1E-61 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Y11_08261 92105b9cd6c0f2c9ac3a3e31526e038f 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 51.121 T 13-10-2018 IPR022913 Multidrug resistance protein MdtK Y11_08261 92105b9cd6c0f2c9ac3a3e31526e038f 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 1.0E-119 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Y11_08261 92105b9cd6c0f2c9ac3a3e31526e038f 457 Pfam PF01554 MatE 17 177 1.1E-38 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Y11_08261 92105b9cd6c0f2c9ac3a3e31526e038f 457 Pfam PF01554 MatE 244 405 5.9E-38 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Y11_31651 de10655aa7ecebae8fdd1ec94e757618 404 Pfam PF07690 Major Facilitator Superfamily 28 332 1.0E-32 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_31651 de10655aa7ecebae8fdd1ec94e757618 404 Gene3D G3DSA:1.20.1250.20 221 399 1.8E-18 T 13-10-2018 Y11_31651 de10655aa7ecebae8fdd1ec94e757618 404 Gene3D G3DSA:1.20.1250.20 22 220 5.1E-21 T 13-10-2018 Y11_31651 de10655aa7ecebae8fdd1ec94e757618 404 SUPERFAMILY SSF103473 23 398 1.15E-49 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_14561 78e128c9a57d903485408e4878f26b0e 129 SMART SM00448 6 120 3.4E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_14561 78e128c9a57d903485408e4878f26b0e 129 Pfam PF00072 Response regulator receiver domain 9 120 6.0E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_14561 78e128c9a57d903485408e4878f26b0e 129 SUPERFAMILY SSF52172 5 125 3.42E-36 T 13-10-2018 IPR011006 CheY-like superfamily Y11_14561 78e128c9a57d903485408e4878f26b0e 129 Gene3D G3DSA:3.40.50.2300 2 129 2.1E-38 T 13-10-2018 Y11_00181 102867c63e5e7d171e030ad3bd28852f 124 Pfam PF01548 Transposase 7 112 1.2E-9 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_15901 c6e62bb821316e188b1d5b5044b71e3d 352 Gene3D G3DSA:1.10.1610.10 11 337 1.1E-128 T 13-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Y11_15901 c6e62bb821316e188b1d5b5044b71e3d 352 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 15 345 3.4E-120 T 13-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Y11_15901 c6e62bb821316e188b1d5b5044b71e3d 352 Gene3D G3DSA:3.40.50.10210 57 328 1.1E-128 T 13-10-2018 Y11_15901 c6e62bb821316e188b1d5b5044b71e3d 352 Pfam PF02277 Phosphoribosyltransferase 11 344 8.4E-119 T 13-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Y11_15901 c6e62bb821316e188b1d5b5044b71e3d 352 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 13 347 33.492 T 13-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Y11_15901 c6e62bb821316e188b1d5b5044b71e3d 352 SUPERFAMILY SSF52733 6 346 1.31E-111 T 13-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Y11_30961 0a9de781f38ce0b2e2d1f3489a5b5b9c 400 Pfam PF00872 Transposase, Mutator family 10 373 4.0E-103 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Y11_19861 563f7a459d6b6ca8eb59099fa53d6c83 410 SUPERFAMILY SSF103473 12 405 3.66E-59 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_19861 563f7a459d6b6ca8eb59099fa53d6c83 410 Pfam PF07690 Major Facilitator Superfamily 36 368 3.3E-34 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_19861 563f7a459d6b6ca8eb59099fa53d6c83 410 Gene3D G3DSA:1.20.1250.20 14 212 1.3E-22 T 13-10-2018 Y11_19861 563f7a459d6b6ca8eb59099fa53d6c83 410 Gene3D G3DSA:1.20.1250.20 222 410 2.9E-20 T 13-10-2018 Y11_42011 901a1977460ff78a5d9daee51b0357a2 92 SUPERFAMILY SSF52794 1 90 8.63E-25 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Y11_42011 901a1977460ff78a5d9daee51b0357a2 92 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 1 81 1.4E-11 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Y11_42011 901a1977460ff78a5d9daee51b0357a2 92 Gene3D G3DSA:3.40.50.2300 1 92 2.0E-25 T 13-10-2018 Y11_01581 ccd07625685e67d0a46c5fa1131f66e4 464 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 372 431 0.002 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Y11_01581 ccd07625685e67d0a46c5fa1131f66e4 464 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 113 212 4.0E-51 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Y11_01581 ccd07625685e67d0a46c5fa1131f66e4 464 Gene3D G3DSA:2.40.170.10 85 464 6.2E-65 T 13-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 Y11_01581 ccd07625685e67d0a46c5fa1131f66e4 464 SUPERFAMILY SSF56935 85 464 1.41E-91 T 13-10-2018 Y11_01581 ccd07625685e67d0a46c5fa1131f66e4 464 Pfam PF02264 LamB porin 87 464 1.5E-76 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Y11_39831 156c27898229a5bcf39f4d511b51b49f 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 192 2.1E-49 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Y11_39831 156c27898229a5bcf39f4d511b51b49f 198 Gene3D G3DSA:3.40.50.10420 4 197 3.7E-57 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Y11_39831 156c27898229a5bcf39f4d511b51b49f 198 SUPERFAMILY SSF100950 10 198 6.14E-57 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_39831 156c27898229a5bcf39f4d511b51b49f 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 192 2.3E-54 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Y11_39831 156c27898229a5bcf39f4d511b51b49f 198 PIRSF PIRSF006806 7 195 1.3E-40 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Y11_21071 7d9265280f522a566dd8d47f926fbe38 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 42.078 T 13-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 Y11_21071 7d9265280f522a566dd8d47f926fbe38 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 1.1E-129 T 13-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 Y11_20801 b184b35aab6d24a9c8b7dba5923e40e7 149 Pfam PF03477 ATP cone domain 50 136 7.6E-16 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Y11_20801 b184b35aab6d24a9c8b7dba5923e40e7 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.5E-76 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Y11_20801 b184b35aab6d24a9c8b7dba5923e40e7 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 88.974 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Y11_00911 65561b0adec3ab3358b6a8b18797bd4b 158 Pfam PF05232 Chlorhexidine efflux transporter 6 68 1.6E-23 T 13-10-2018 IPR007896 Chlorhexidine efflux transporter Y11_00911 65561b0adec3ab3358b6a8b18797bd4b 158 Pfam PF05232 Chlorhexidine efflux transporter 74 137 1.3E-22 T 13-10-2018 IPR007896 Chlorhexidine efflux transporter Y11_20131 be0a10320794371ae81e2f73e72beb3c 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 4.6E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Y11_20131 be0a10320794371ae81e2f73e72beb3c 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 4.6E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Y11_20131 be0a10320794371ae81e2f73e72beb3c 218 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 203 8.5E-55 T 13-10-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 Y11_20131 be0a10320794371ae81e2f73e72beb3c 218 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Y11_20131 be0a10320794371ae81e2f73e72beb3c 218 Gene3D G3DSA:1.10.357.10 1 216 8.2E-79 T 13-10-2018 Y11_20131 be0a10320794371ae81e2f73e72beb3c 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 2.8E-18 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Y11_20131 be0a10320794371ae81e2f73e72beb3c 218 SUPERFAMILY SSF46689 2 67 1.28E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_20131 be0a10320794371ae81e2f73e72beb3c 218 SUPERFAMILY SSF48498 85 203 1.29E-13 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Y11_04141 913a6409702a17542f3a7f897988c95c 588 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 1.3E-160 T 13-10-2018 IPR003776 YcaO-like domain Y11_04141 913a6409702a17542f3a7f897988c95c 588 Gene3D G3DSA:3.30.160.660 217 341 2.9E-13 T 13-10-2018 Y11_04141 913a6409702a17542f3a7f897988c95c 588 Gene3D G3DSA:1.10.490.140 181 395 2.9E-13 T 13-10-2018 Y11_04141 913a6409702a17542f3a7f897988c95c 588 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 4.2E-79 T 13-10-2018 IPR003776 YcaO-like domain Y11_12251 35abd0d25703de5f397054c593973570 493 Gene3D G3DSA:3.40.309.10 250 440 9.9E-143 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Y11_12251 35abd0d25703de5f397054c593973570 493 SUPERFAMILY SSF53720 4 458 5.89E-123 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Y11_12251 35abd0d25703de5f397054c593973570 493 Pfam PF00171 Aldehyde dehydrogenase family 12 461 3.8E-121 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Y11_12251 35abd0d25703de5f397054c593973570 493 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Y11_12251 35abd0d25703de5f397054c593973570 493 Gene3D G3DSA:3.40.605.10 10 452 9.9E-143 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Y11_12251 35abd0d25703de5f397054c593973570 493 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Y11_12251 35abd0d25703de5f397054c593973570 493 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 6 489 2.4E-260 T 13-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 Y11_12251 35abd0d25703de5f397054c593973570 493 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 4 489 58.234 T 13-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 Y11_38361 cc6efc365287d43bddbe7176a8f58c14 317 Gene3D G3DSA:3.20.20.70 2 317 2.8E-148 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_38361 cc6efc365287d43bddbe7176a8f58c14 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 313 4.4E-101 T 13-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Y11_38361 cc6efc365287d43bddbe7176a8f58c14 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Y11_38361 cc6efc365287d43bddbe7176a8f58c14 317 Hamap MF_00492 Transaldolase [tal]. 2 317 51.802 T 13-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Y11_38361 cc6efc365287d43bddbe7176a8f58c14 317 SUPERFAMILY SSF51569 1 316 7.01E-116 T 13-10-2018 Y11_38361 cc6efc365287d43bddbe7176a8f58c14 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Y11_38361 cc6efc365287d43bddbe7176a8f58c14 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 2.0E-163 T 13-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Y11_28081 1d85fac461ffe8732cbc2f9d0b0df9dd 258 TIGRFAM TIGR00761 argB: acetylglutamate kinase 5 234 5.3E-72 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Y11_28081 1d85fac461ffe8732cbc2f9d0b0df9dd 258 PIRSF PIRSF000728 1 258 1.5E-70 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Y11_28081 1d85fac461ffe8732cbc2f9d0b0df9dd 258 Pfam PF00696 Amino acid kinase family 5 235 1.2E-37 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Y11_28081 1d85fac461ffe8732cbc2f9d0b0df9dd 258 SUPERFAMILY SSF53633 3 256 1.96E-58 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Y11_28081 1d85fac461ffe8732cbc2f9d0b0df9dd 258 Hamap MF_00082 Acetylglutamate kinase [argB]. 2 251 43.537 T 13-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Y11_28081 1d85fac461ffe8732cbc2f9d0b0df9dd 258 Gene3D G3DSA:3.40.1160.10 2 257 2.6E-72 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Y11_42131 25287d062a42f86e78795342fee6ab2c 113 Gene3D G3DSA:3.30.1450.10 34 113 9.2E-31 T 13-10-2018 IPR037873 BamE-like Y11_42131 25287d062a42f86e78795342fee6ab2c 113 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 32.226 T 13-10-2018 IPR026592 Outer membrane protein assembly factor BamE Y11_42131 25287d062a42f86e78795342fee6ab2c 113 Pfam PF04355 SmpA / OmlA family 35 104 4.5E-26 T 13-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 Y11_03741 3e0c4cfeed47996d908e1825d48a0b6a 222 SUPERFAMILY SSF161098 6 201 4.71E-28 T 13-10-2018 IPR035906 MetI-like superfamily Y11_03741 3e0c4cfeed47996d908e1825d48a0b6a 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 1.2E-15 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Y11_03741 3e0c4cfeed47996d908e1825d48a0b6a 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 215 2.0E-12 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_03741 3e0c4cfeed47996d908e1825d48a0b6a 222 Gene3D G3DSA:1.10.3720.10 1 216 7.7E-39 T 13-10-2018 IPR035906 MetI-like superfamily Y11_00871 12acae8aa052b3afbd333f82ceeedbef 329 Pfam PF00248 Aldo/keto reductase family 28 327 4.0E-65 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain Y11_00871 12acae8aa052b3afbd333f82ceeedbef 329 SUPERFAMILY SSF51430 13 327 1.57E-86 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Y11_00871 12acae8aa052b3afbd333f82ceeedbef 329 Gene3D G3DSA:3.20.20.100 15 329 4.5E-117 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Y11_p0091 da60309ee8824bf893ed720a9be3d9b5 322 Pfam PF03543 Yersinia/Haemophilus virulence surface antigen 103 319 2.4E-66 T 13-10-2018 IPR006473 Peptidase C58, YopT-type domain GO:0004197|GO:0009405 Y11_p0091 da60309ee8824bf893ed720a9be3d9b5 322 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 216 231 2.3E-77 T 13-10-2018 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 Y11_p0091 da60309ee8824bf893ed720a9be3d9b5 322 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 20 36 2.3E-77 T 13-10-2018 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 Y11_p0091 da60309ee8824bf893ed720a9be3d9b5 322 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 103 126 2.3E-77 T 13-10-2018 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 Y11_p0091 da60309ee8824bf893ed720a9be3d9b5 322 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 268 288 2.3E-77 T 13-10-2018 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 Y11_p0091 da60309ee8824bf893ed720a9be3d9b5 322 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 157 183 2.3E-77 T 13-10-2018 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 Y11_p0091 da60309ee8824bf893ed720a9be3d9b5 322 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 130 146 2.3E-77 T 13-10-2018 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 Y11_p0091 da60309ee8824bf893ed720a9be3d9b5 322 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 52 71 2.3E-77 T 13-10-2018 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 Y11_p0091 da60309ee8824bf893ed720a9be3d9b5 322 TIGRFAM TIGR01586 yopT_cys_prot: cysteine protease domain, YopT-type 123 320 1.3E-58 T 13-10-2018 IPR006473 Peptidase C58, YopT-type domain GO:0004197|GO:0009405 Y11_p0091 da60309ee8824bf893ed720a9be3d9b5 322 SUPERFAMILY SSF54001 114 319 8.14E-47 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Y11_p0091 da60309ee8824bf893ed720a9be3d9b5 322 Gene3D G3DSA:3.90.70.20 126 294 2.0E-5 T 13-10-2018 Y11_37501 4ecc47a4658c625ce8948004531e7c33 488 SUPERFAMILY SSF48371 75 282 2.15E-6 T 13-10-2018 IPR016024 Armadillo-type fold Y11_06291 6bf953825696fd8886cb07adb8c0ad57 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 265 2.9E-124 T 13-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 Y11_06291 6bf953825696fd8886cb07adb8c0ad57 265 Pfam PF03609 PTS system sorbose-specific iic component 6 237 9.5E-75 T 13-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 Y11_24191 55b3f4912f5fb57993a795c23ebc3baf 361 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 101 7.9E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_24191 55b3f4912f5fb57993a795c23ebc3baf 361 SMART SM00862 26 101 1.1E-12 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_24191 55b3f4912f5fb57993a795c23ebc3baf 361 SUPERFAMILY SSF46894 7 101 6.52E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_24191 55b3f4912f5fb57993a795c23ebc3baf 361 Gene3D G3DSA:1.10.10.10 2 107 2.3E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_10541 14a592ad21fa9b353d0e0c6b590ca200 188 Gene3D G3DSA:2.60.120.10 92 187 1.5E-28 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_10541 14a592ad21fa9b353d0e0c6b590ca200 188 SMART SM00530 11 66 2.9E-15 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_10541 14a592ad21fa9b353d0e0c6b590ca200 188 SUPERFAMILY SSF51182 51 184 1.85E-29 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_10541 14a592ad21fa9b353d0e0c6b590ca200 188 Pfam PF07883 Cupin domain 111 179 1.1E-12 T 13-10-2018 IPR013096 Cupin 2, conserved barrel Y11_10541 14a592ad21fa9b353d0e0c6b590ca200 188 Gene3D G3DSA:1.10.260.40 1 77 2.5E-22 T 13-10-2018 Y11_10541 14a592ad21fa9b353d0e0c6b590ca200 188 SUPERFAMILY SSF47413 3 70 4.83E-19 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_10541 14a592ad21fa9b353d0e0c6b590ca200 188 Pfam PF01381 Helix-turn-helix 12 64 1.7E-15 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_28681 c414268e9b48f24bbdf84fde821d75e8 90 Gene3D G3DSA:1.10.1660.70 5 90 2.6E-35 T 13-10-2018 IPR038147 Cox superfamily Y11_28681 c414268e9b48f24bbdf84fde821d75e8 90 Pfam PF10743 Regulatory phage protein cox 11 90 2.3E-31 T 13-10-2018 IPR019679 Regulatory phage protein Cox Y11_19921 a555a14b718758828310701c5f531e37 338 SUPERFAMILY SSF53756 3 335 1.73E-53 T 13-10-2018 Y11_19921 a555a14b718758828310701c5f531e37 338 Gene3D G3DSA:3.40.50.2000 2 173 1.5E-11 T 13-10-2018 Y11_19921 a555a14b718758828310701c5f531e37 338 Pfam PF00534 Glycosyl transferases group 1 179 311 1.6E-22 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Y11_19921 a555a14b718758828310701c5f531e37 338 Gene3D G3DSA:3.40.50.2000 174 323 1.9E-28 T 13-10-2018 Y11_19921 a555a14b718758828310701c5f531e37 338 Pfam PF13439 Glycosyltransferase Family 4 13 167 4.8E-9 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Y11_27051 e16baea55e515101c65a299128ca70d5 92 Gene3D G3DSA:1.10.260.40 4 88 2.6E-8 T 13-10-2018 Y11_27051 e16baea55e515101c65a299128ca70d5 92 SUPERFAMILY SSF47413 11 65 4.5E-7 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_27051 e16baea55e515101c65a299128ca70d5 92 Pfam PF01381 Helix-turn-helix 20 50 5.5E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_33421 d406a5cc7224a24586f02ddd8582d52a 85 Pfam PF13710 ACT domain 13 73 1.0E-25 T 13-10-2018 Y11_33421 d406a5cc7224a24586f02ddd8582d52a 85 Gene3D G3DSA:3.30.70.260 1 85 1.7E-7 T 13-10-2018 Y11_33421 d406a5cc7224a24586f02ddd8582d52a 85 SUPERFAMILY SSF55021 3 76 2.98E-12 T 13-10-2018 Y11_37391 d9849f36cc9915a6db9eebbb7063564c 82 SUPERFAMILY SSF47598 7 48 2.89E-8 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Y11_37391 d9849f36cc9915a6db9eebbb7063564c 82 Pfam PF01402 Ribbon-helix-helix protein, copG family 9 41 6.8E-7 T 13-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Y11_28701 b96903381554c94d23881ead365d3f1e 284 SUPERFAMILY SSF56349 19 272 7.36E-44 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Y11_28701 b96903381554c94d23881ead365d3f1e 284 Pfam PF00589 Phage integrase family 225 265 1.9E-10 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Y11_28701 b96903381554c94d23881ead365d3f1e 284 Pfam PF00589 Phage integrase family 122 199 1.7E-8 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Y11_28701 b96903381554c94d23881ead365d3f1e 284 Gene3D G3DSA:1.10.150.130 15 117 1.5E-6 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Y11_28701 b96903381554c94d23881ead365d3f1e 284 Gene3D G3DSA:1.10.443.10 121 280 1.8E-39 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Y11_29201 a80f2de2f11ef0e8c03c6a8d44c6e4d8 173 Pfam PF01548 Transposase 16 156 7.0E-16 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_01841 0f835d951981e6f1e9314c56ae2b29db 169 Pfam PF02674 Colicin V production protein 4 142 9.0E-36 T 13-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 Y11_41341 06d90f374d5b5ede0ee3d65d0d844b79 343 Pfam PF00005 ABC transporter 21 169 2.4E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_41341 06d90f374d5b5ede0ee3d65d0d844b79 343 SMART SM00930 265 340 2.9E-24 T 13-10-2018 IPR018449 NIL domain Y11_41341 06d90f374d5b5ede0ee3d65d0d844b79 343 SUPERFAMILY SSF55021 248 343 4.69E-24 T 13-10-2018 Y11_41341 06d90f374d5b5ede0ee3d65d0d844b79 343 Gene3D G3DSA:3.30.70.260 233 343 3.5E-37 T 13-10-2018 Y11_41341 06d90f374d5b5ede0ee3d65d0d844b79 343 Gene3D G3DSA:3.40.50.300 1 232 1.1E-78 T 13-10-2018 Y11_41341 06d90f374d5b5ede0ee3d65d0d844b79 343 Pfam PF09383 NIL domain 268 339 3.6E-18 T 13-10-2018 IPR018449 NIL domain Y11_41341 06d90f374d5b5ede0ee3d65d0d844b79 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_41341 06d90f374d5b5ede0ee3d65d0d844b79 343 SMART SM00382 30 217 1.3E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_41341 06d90f374d5b5ede0ee3d65d0d844b79 343 SUPERFAMILY SSF52540 1 240 3.47E-84 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_41341 06d90f374d5b5ede0ee3d65d0d844b79 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 6.3E-196 T 13-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 Y11_35071 c6e3053b38961219d451985429a4d0ec 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 3.1E-77 T 13-10-2018 IPR007338 Protein of unknown function DUF416 Y11_35071 c6e3053b38961219d451985429a4d0ec 196 Gene3D G3DSA:1.20.1590.10 3 194 2.6E-64 T 13-10-2018 IPR023381 YP001051499.1-like domain superfamily Y11_36031 d75278c013ae03788580f51a34be9b7f 350 Gene3D G3DSA:2.40.50.140 34 101 1.7E-26 T 13-10-2018 Y11_36031 d75278c013ae03788580f51a34be9b7f 350 SUPERFAMILY SSF52540 113 340 3.64E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_36031 d75278c013ae03788580f51a34be9b7f 350 Gene3D G3DSA:1.10.40.50 276 349 3.3E-28 T 13-10-2018 Y11_36031 d75278c013ae03788580f51a34be9b7f 350 Gene3D G3DSA:3.40.50.300 102 275 1.3E-47 T 13-10-2018 Y11_36031 d75278c013ae03788580f51a34be9b7f 350 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 72 334 9.7E-93 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Y11_36031 d75278c013ae03788580f51a34be9b7f 350 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 39 340 37.405 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Y11_36031 d75278c013ae03788580f51a34be9b7f 350 Pfam PF03193 RsgA GTPase 99 276 1.4E-54 T 13-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 Y11_32901 238b2593ace987d953e258571b3044ef 100 Pfam PF00276 Ribosomal protein L23 9 95 3.2E-32 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Y11_32901 238b2593ace987d953e258571b3044ef 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 13-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32901 238b2593ace987d953e258571b3044ef 100 SUPERFAMILY SSF54189 3 92 5.04E-31 T 13-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32901 238b2593ace987d953e258571b3044ef 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 23.063 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Y11_32901 238b2593ace987d953e258571b3044ef 100 Gene3D G3DSA:3.30.70.330 1 100 1.7E-39 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Y11_03801 c8320a1cc5d85ca2d8617c519509ddca 485 Gene3D G3DSA:3.40.50.720 5 300 6.9E-33 T 13-10-2018 Y11_03801 c8320a1cc5d85ca2d8617c519509ddca 485 Pfam PF13460 NAD(P)H-binding 10 122 5.6E-11 T 13-10-2018 IPR016040 NAD(P)-binding domain Y11_03801 c8320a1cc5d85ca2d8617c519509ddca 485 Pfam PF11066 Protein of unknown function (DUF2867) 335 464 7.9E-13 T 13-10-2018 IPR021295 Protein of unknown function DUF2867 Y11_03801 c8320a1cc5d85ca2d8617c519509ddca 485 SUPERFAMILY SSF51735 1 296 1.09E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_33941 d6b284c70328157221fb86b37661ef60 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 207 4.9E-12 T 13-10-2018 Y11_33941 d6b284c70328157221fb86b37661ef60 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 118 201 1.9E-12 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_33941 d6b284c70328157221fb86b37661ef60 238 SUPERFAMILY SSF56784 10 238 3.6E-41 T 13-10-2018 IPR036412 HAD-like superfamily Y11_33941 d6b284c70328157221fb86b37661ef60 238 Gene3D G3DSA:3.40.50.1000 12 231 3.1E-62 T 13-10-2018 IPR023214 HAD superfamily Y11_33941 d6b284c70328157221fb86b37661ef60 238 Gene3D G3DSA:1.20.120.1600 24 110 3.1E-62 T 13-10-2018 Y11_p0741 b75eb9358726ad73c8417c06b1f6eedc 217 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 1.5E-95 T 13-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 Y11_p0741 b75eb9358726ad73c8417c06b1f6eedc 217 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_p0741 b75eb9358726ad73c8417c06b1f6eedc 217 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_p0741 b75eb9358726ad73c8417c06b1f6eedc 217 Pfam PF00813 FliP family 13 211 2.7E-67 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_p0741 b75eb9358726ad73c8417c06b1f6eedc 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 9.6E-72 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_p0741 b75eb9358726ad73c8417c06b1f6eedc 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 9.6E-72 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_p0741 b75eb9358726ad73c8417c06b1f6eedc 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 9.6E-72 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_p0741 b75eb9358726ad73c8417c06b1f6eedc 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 9.6E-72 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_p0741 b75eb9358726ad73c8417c06b1f6eedc 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 9.6E-72 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_p0741 b75eb9358726ad73c8417c06b1f6eedc 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 9.6E-72 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_35851 86cdd13c8c3a2fd7c75548133a910d58 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 8.0E-196 T 13-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 Y11_35851 86cdd13c8c3a2fd7c75548133a910d58 433 PIRSF PIRSF004539 1 433 2.7E-174 T 13-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 Y11_35851 86cdd13c8c3a2fd7c75548133a910d58 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 7.4E-142 T 13-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 Y11_08191 1574a9b6417558d60f7c459cbe011a41 503 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 494 1.2E-192 T 13-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 Y11_08191 1574a9b6417558d60f7c459cbe011a41 503 Pfam PF01458 Uncharacterized protein family (UPF0051) 242 474 2.4E-67 T 13-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 Y11_08191 1574a9b6417558d60f7c459cbe011a41 503 SUPERFAMILY SSF101960 41 500 1.44E-134 T 13-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Y11_22831 3a8d954deed15bd8e46c050740b247a4 216 Gene3D G3DSA:3.40.50.300 20 215 2.2E-79 T 13-10-2018 Y11_22831 3a8d954deed15bd8e46c050740b247a4 216 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 41 212 38.407 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Y11_22831 3a8d954deed15bd8e46c050740b247a4 216 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 25 208 2.0E-85 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Y11_22831 3a8d954deed15bd8e46c050740b247a4 216 Pfam PF01583 Adenylylsulphate kinase 42 194 6.6E-73 T 13-10-2018 Y11_22831 3a8d954deed15bd8e46c050740b247a4 216 SUPERFAMILY SSF52540 40 206 4.85E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_30091 14a3b59c7b870b35e29a72485c2661e5 361 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 361 99.266 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Y11_30091 14a3b59c7b870b35e29a72485c2661e5 361 Gene3D G3DSA:1.20.1050.90 120 297 8.0E-80 T 13-10-2018 Y11_30091 14a3b59c7b870b35e29a72485c2661e5 361 Gene3D G3DSA:3.40.50.300 8 331 8.0E-80 T 13-10-2018 Y11_30091 14a3b59c7b870b35e29a72485c2661e5 361 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 2.9E-132 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Y11_30091 14a3b59c7b870b35e29a72485c2661e5 361 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 13-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Y11_30091 14a3b59c7b870b35e29a72485c2661e5 361 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 342 3.2E-39 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Y11_30091 14a3b59c7b870b35e29a72485c2661e5 361 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 13-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Y11_30091 14a3b59c7b870b35e29a72485c2661e5 361 SUPERFAMILY SSF52540 1 340 5.09E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_25251 d26698f098a3adeb090cae12060cda5c 302 PIRSF PIRSF020481 1 302 7.6E-128 T 13-10-2018 IPR014507 Baseplate assembly protein J, predicted Y11_25251 d26698f098a3adeb090cae12060cda5c 302 Pfam PF04865 Baseplate J-like protein 118 261 2.3E-24 T 13-10-2018 IPR006949 Baseplate protein J-like Y11_13401 d26698f098a3adeb090cae12060cda5c 302 PIRSF PIRSF020481 1 302 7.6E-128 T 13-10-2018 IPR014507 Baseplate assembly protein J, predicted Y11_13401 d26698f098a3adeb090cae12060cda5c 302 Pfam PF04865 Baseplate J-like protein 118 261 2.3E-24 T 13-10-2018 IPR006949 Baseplate protein J-like Y11_16281 a339b743e6e3b41875f3f1aa30323042 462 Pfam PF00171 Aldehyde dehydrogenase family 28 416 1.9E-30 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Y11_16281 a339b743e6e3b41875f3f1aa30323042 462 Gene3D G3DSA:3.40.605.10 33 237 1.6E-108 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Y11_16281 a339b743e6e3b41875f3f1aa30323042 462 Gene3D G3DSA:3.40.309.10 238 417 1.6E-108 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Y11_16281 a339b743e6e3b41875f3f1aa30323042 462 SUPERFAMILY SSF53720 17 453 5.24E-60 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Y11_16281 a339b743e6e3b41875f3f1aa30323042 462 PIRSF PIRSF036410 1 462 2.5E-208 T 13-10-2018 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related Y11_21901 7c2f60ae203001ef517023bbf018d18b 120 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 2.5E-32 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Y11_21901 7c2f60ae203001ef517023bbf018d18b 120 Gene3D G3DSA:3.30.160.100 1 107 2.7E-36 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like Y11_21901 7c2f60ae203001ef517023bbf018d18b 120 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 2.2E-21 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Y11_21901 7c2f60ae203001ef517023bbf018d18b 120 SUPERFAMILY SSF69754 3 105 8.11E-32 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like Y11_33271 0417dc11d524e6e8969247e6108a83f6 195 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 12 193 41.38 T 13-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 Y11_33271 0417dc11d524e6e8969247e6108a83f6 195 Pfam PF01300 Telomere recombination 20 170 3.5E-43 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 Y11_33271 0417dc11d524e6e8969247e6108a83f6 195 SUPERFAMILY SSF55821 11 191 8.85E-55 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Y11_33271 0417dc11d524e6e8969247e6108a83f6 195 Gene3D G3DSA:3.90.870.10 6 193 3.6E-64 T 13-10-2018 Y11_35771 47c4dcb37d59e732cb5d5640cd903d3d 442 Pfam PF01490 Transmembrane amino acid transporter protein 24 440 1.7E-6 T 13-10-2018 IPR013057 Amino acid transporter, transmembrane domain Y11_35771 47c4dcb37d59e732cb5d5640cd903d3d 442 TIGRFAM TIGR00814 stp: serine transporter 16 432 5.1E-166 T 13-10-2018 IPR004694 Hydroxy amino acid transporter GO:0006865|GO:0015171|GO:0016021 Y11_35771 47c4dcb37d59e732cb5d5640cd903d3d 442 Hamap MF_01583 Threonine/serine transporter TdcC [tdcC]. 1 442 49.868 T 13-10-2018 IPR023726 Threonine/serine transporter TdcC GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 Y11_17721 40770f4532c0b30df9c3564ad4254530 276 Gene3D G3DSA:1.10.3720.10 63 264 7.2E-28 T 13-10-2018 IPR035906 MetI-like superfamily Y11_17721 40770f4532c0b30df9c3564ad4254530 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 262 1.6E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_17721 40770f4532c0b30df9c3564ad4254530 276 SUPERFAMILY SSF161098 67 255 2.09E-33 T 13-10-2018 IPR035906 MetI-like superfamily Y11_00631 405de8d26172aaa07b9d1489b655dfd2 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 267 4.9E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_00631 405de8d26172aaa07b9d1489b655dfd2 291 Gene3D G3DSA:1.10.3720.10 20 276 6.6E-60 T 13-10-2018 IPR035906 MetI-like superfamily Y11_00631 405de8d26172aaa07b9d1489b655dfd2 291 SUPERFAMILY SSF161098 16 268 9.81E-54 T 13-10-2018 IPR035906 MetI-like superfamily Y11_00631 405de8d26172aaa07b9d1489b655dfd2 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 8.6E-115 T 13-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 Y11_00631 405de8d26172aaa07b9d1489b655dfd2 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 15 275 7.5E-108 T 13-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 Y11_11331 cc80c1896e91803faeccc7d6890e9e9e 644 SMART SM00763 19 380 9.9E-215 T 13-10-2018 IPR013153 PrkA AAA domain Y11_11331 cc80c1896e91803faeccc7d6890e9e9e 644 Pfam PF08298 PrkA AAA domain 20 380 4.5E-175 T 13-10-2018 IPR013153 PrkA AAA domain Y11_11331 cc80c1896e91803faeccc7d6890e9e9e 644 SUPERFAMILY SSF52540 75 368 5.21E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_11331 cc80c1896e91803faeccc7d6890e9e9e 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 4.6E-73 T 13-10-2018 IPR010650 PrkA C-terminal domain Y11_11331 cc80c1896e91803faeccc7d6890e9e9e 644 PIRSF PIRSF000549 1 644 5.5E-286 T 13-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 Y11_15941 86b903ce6a936c653d773e47e049d0e9 517 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 258 455 1.1E-56 T 13-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Y11_15941 86b903ce6a936c653d773e47e049d0e9 517 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 511 184.458 T 13-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Y11_15941 86b903ce6a936c653d773e47e049d0e9 517 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 10 503 1.1E-159 T 13-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Y11_15941 86b903ce6a936c653d773e47e049d0e9 517 Gene3D G3DSA:3.40.50.880 256 428 4.2E-19 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_15941 86b903ce6a936c653d773e47e049d0e9 517 SUPERFAMILY SSF52317 259 464 1.99E-32 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_15941 86b903ce6a936c653d773e47e049d0e9 517 Gene3D G3DSA:3.40.50.300 7 245 7.6E-56 T 13-10-2018 Y11_15941 86b903ce6a936c653d773e47e049d0e9 517 Pfam PF13500 AAA domain 9 232 2.4E-22 T 13-10-2018 Y11_15941 86b903ce6a936c653d773e47e049d0e9 517 SUPERFAMILY SSF52540 6 233 3.36E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_30181 0484dcdb424d6c7fcc02aed8f4bf4b02 157 Gene3D G3DSA:2.60.40.790 32 135 9.3E-22 T 13-10-2018 IPR008978 HSP20-like chaperone Y11_30181 0484dcdb424d6c7fcc02aed8f4bf4b02 157 SUPERFAMILY SSF49764 30 134 9.42E-20 T 13-10-2018 IPR008978 HSP20-like chaperone Y11_30181 0484dcdb424d6c7fcc02aed8f4bf4b02 157 Pfam PF00011 Hsp20/alpha crystallin family 39 134 8.4E-17 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Y11_30181 0484dcdb424d6c7fcc02aed8f4bf4b02 157 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 147 47.428 T 13-10-2018 IPR022848 Small heat shock protein IbpB Y11_26871 9542ee669b61a0762941e6a1d9db738c 88 SUPERFAMILY SSF52038 1 87 3.79E-29 T 13-10-2018 IPR035905 Barstar-like superfamily Y11_26871 9542ee669b61a0762941e6a1d9db738c 88 Gene3D G3DSA:3.30.370.10 1 88 9.5E-36 T 13-10-2018 IPR035905 Barstar-like superfamily Y11_26871 9542ee669b61a0762941e6a1d9db738c 88 Pfam PF01337 Barstar (barnase inhibitor) 6 80 2.6E-12 T 13-10-2018 IPR000468 Barstar (barnase inhibitor) Y11_36281 f6842eec47b2fd095779dabf829daa61 55 PIRSF PIRSF003135 1 52 3.2E-23 T 13-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 Y11_36281 f6842eec47b2fd095779dabf829daa61 55 SUPERFAMILY SSF50249 1 54 2.28E-11 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_36281 f6842eec47b2fd095779dabf829daa61 55 Gene3D G3DSA:2.40.50.140 1 55 1.7E-15 T 13-10-2018 Y11_20751 c27bda4590941cc432cfb5e84c33e620 165 SUPERFAMILY SSF101307 8 155 1.83E-49 T 13-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 Y11_20751 c27bda4590941cc432cfb5e84c33e620 165 Pfam PF04608 Phosphatidylglycerophosphatase A 15 154 6.6E-53 T 13-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 Y11_20751 c27bda4590941cc432cfb5e84c33e620 165 PIRSF PIRSF006162 4 162 1.8E-60 T 13-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Y11_10881 4ff50e4c6f75c041a0f36ab42b34bfe2 214 SUPERFAMILY SSF74653 132 203 9.42E-19 T 13-10-2018 Y11_10881 4ff50e4c6f75c041a0f36ab42b34bfe2 214 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 136 196 5.9E-16 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 Y11_10881 4ff50e4c6f75c041a0f36ab42b34bfe2 214 Pfam PF16031 TonB N-terminal region 3 133 1.3E-22 T 13-10-2018 Y11_10881 4ff50e4c6f75c041a0f36ab42b34bfe2 214 PRINTS PR01374 Gram-negative bacterial tonB protein signature 171 188 3.7E-30 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Y11_10881 4ff50e4c6f75c041a0f36ab42b34bfe2 214 PRINTS PR01374 Gram-negative bacterial tonB protein signature 66 76 3.7E-30 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Y11_10881 4ff50e4c6f75c041a0f36ab42b34bfe2 214 PRINTS PR01374 Gram-negative bacterial tonB protein signature 152 170 3.7E-30 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Y11_10881 4ff50e4c6f75c041a0f36ab42b34bfe2 214 PRINTS PR01374 Gram-negative bacterial tonB protein signature 131 152 3.7E-30 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Y11_10881 4ff50e4c6f75c041a0f36ab42b34bfe2 214 Gene3D G3DSA:3.30.2420.10 126 214 6.0E-28 T 13-10-2018 Y11_10881 4ff50e4c6f75c041a0f36ab42b34bfe2 214 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 137 207 7.0E-18 T 13-10-2018 IPR006260 TonB/TolA, C-terminal Y11_11601 d1763553d9fa81ad8fed94b0b38f106a 270 PIRSF PIRSF003092 1 270 3.8E-98 T 13-10-2018 IPR025501 ATP binding protein MinD Y11_11601 d1763553d9fa81ad8fed94b0b38f106a 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 3.7E-20 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Y11_11601 d1763553d9fa81ad8fed94b0b38f106a 270 Gene3D G3DSA:3.40.50.300 1 260 1.8E-76 T 13-10-2018 Y11_11601 d1763553d9fa81ad8fed94b0b38f106a 270 SUPERFAMILY SSF52540 1 268 1.74E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_11601 d1763553d9fa81ad8fed94b0b38f106a 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 2.1E-111 T 13-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 Y11_19451 77bf389c96d56f08360531ef870840ea 373 SUPERFAMILY SSF51197 6 292 3.85E-74 T 13-10-2018 Y11_19451 77bf389c96d56f08360531ef870840ea 373 SMART SM00558 92 215 1.3E-5 T 13-10-2018 IPR003347 JmjC domain Y11_19451 77bf389c96d56f08360531ef870840ea 373 Gene3D G3DSA:2.60.120.650 2 204 8.9E-80 T 13-10-2018 Y11_19451 77bf389c96d56f08360531ef870840ea 373 Pfam PF08007 Cupin superfamily protein 10 310 2.3E-100 T 13-10-2018 IPR003347 JmjC domain Y11_19451 77bf389c96d56f08360531ef870840ea 373 Gene3D G3DSA:1.10.10.2510 205 373 4.5E-58 T 13-10-2018 Y11_17181 96200fd8560f7972a13855341c97669b 345 Gene3D G3DSA:3.40.50.2300 169 298 3.0E-68 T 13-10-2018 Y11_17181 96200fd8560f7972a13855341c97669b 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 57 2.0E-19 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_17181 96200fd8560f7972a13855341c97669b 345 Gene3D G3DSA:3.40.50.2300 65 314 3.0E-68 T 13-10-2018 Y11_17181 96200fd8560f7972a13855341c97669b 345 SUPERFAMILY SSF47413 10 68 8.94E-19 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_17181 96200fd8560f7972a13855341c97669b 345 SUPERFAMILY SSF53822 70 339 5.62E-80 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_17181 96200fd8560f7972a13855341c97669b 345 Gene3D G3DSA:1.10.260.40 9 64 4.7E-24 T 13-10-2018 Y11_17181 96200fd8560f7972a13855341c97669b 345 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 22 32 3.7E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_17181 96200fd8560f7972a13855341c97669b 345 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 3.7E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_17181 96200fd8560f7972a13855341c97669b 345 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 13-10-2018 Y11_17181 96200fd8560f7972a13855341c97669b 345 SMART SM00354 10 80 4.3E-31 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Y11_17181 96200fd8560f7972a13855341c97669b 345 Pfam PF13377 Periplasmic binding protein-like domain 180 338 9.1E-34 T 13-10-2018 Y11_33721 783100cc8cbcaffcb8fbb0c1ab92ea9b 293 SUPERFAMILY SSF53448 1 286 1.6E-92 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_33721 783100cc8cbcaffcb8fbb0c1ab92ea9b 293 Pfam PF00483 Nucleotidyl transferase 2 238 5.4E-71 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Y11_33721 783100cc8cbcaffcb8fbb0c1ab92ea9b 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 2.6E-159 T 13-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Y11_33721 783100cc8cbcaffcb8fbb0c1ab92ea9b 293 Gene3D G3DSA:3.90.550.10 1 293 3.0E-86 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_14581 d43a2dffbfe6e32097bebcbce1d50956 272 Gene3D G3DSA:1.10.155.10 1 75 9.8E-32 T 13-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Y11_14581 d43a2dffbfe6e32097bebcbce1d50956 272 PRINTS PR00996 Glutamate methyltransferase family signature 31 44 3.8E-45 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Y11_14581 d43a2dffbfe6e32097bebcbce1d50956 272 PRINTS PR00996 Glutamate methyltransferase family signature 70 82 3.8E-45 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Y11_14581 d43a2dffbfe6e32097bebcbce1d50956 272 PRINTS PR00996 Glutamate methyltransferase family signature 228 251 3.8E-45 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Y11_14581 d43a2dffbfe6e32097bebcbce1d50956 272 PRINTS PR00996 Glutamate methyltransferase family signature 103 123 3.8E-45 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Y11_14581 d43a2dffbfe6e32097bebcbce1d50956 272 PRINTS PR00996 Glutamate methyltransferase family signature 137 153 3.8E-45 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Y11_14581 d43a2dffbfe6e32097bebcbce1d50956 272 PRINTS PR00996 Glutamate methyltransferase family signature 209 223 3.8E-45 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Y11_14581 d43a2dffbfe6e32097bebcbce1d50956 272 SUPERFAMILY SSF47757 3 76 1.11E-24 T 13-10-2018 Y11_14581 d43a2dffbfe6e32097bebcbce1d50956 272 Gene3D G3DSA:3.40.50.150 76 269 3.2E-72 T 13-10-2018 Y11_14581 d43a2dffbfe6e32097bebcbce1d50956 272 PIRSF PIRSF000410 1 270 6.1E-99 T 13-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR Y11_14581 d43a2dffbfe6e32097bebcbce1d50956 272 Pfam PF01739 CheR methyltransferase, SAM binding domain 77 264 2.3E-58 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Y11_14581 d43a2dffbfe6e32097bebcbce1d50956 272 Pfam PF03705 CheR methyltransferase, all-alpha domain 11 62 7.7E-20 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Y11_14581 d43a2dffbfe6e32097bebcbce1d50956 272 SUPERFAMILY SSF53335 77 266 3.93E-59 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_14581 d43a2dffbfe6e32097bebcbce1d50956 272 SMART SM00138 9 269 1.5E-114 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Y11_09251 5fbec8dcd504f118142d509c98b358a8 224 SUPERFAMILY SSF56784 2 222 1.19E-47 T 13-10-2018 IPR036412 HAD-like superfamily Y11_09251 5fbec8dcd504f118142d509c98b358a8 224 Gene3D G3DSA:1.10.150.240 16 95 1.1E-61 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Y11_09251 5fbec8dcd504f118142d509c98b358a8 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 3.4E-20 T 13-10-2018 Y11_09251 5fbec8dcd504f118142d509c98b358a8 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 221 6.3E-75 T 13-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 Y11_09251 5fbec8dcd504f118142d509c98b358a8 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 3.9E-14 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_09251 5fbec8dcd504f118142d509c98b358a8 224 Gene3D G3DSA:3.40.50.1000 5 218 1.1E-61 T 13-10-2018 IPR023214 HAD superfamily Y11_09251 5fbec8dcd504f118142d509c98b358a8 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 58 195 6.0E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_09251 5fbec8dcd504f118142d509c98b358a8 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 8.2E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_09251 5fbec8dcd504f118142d509c98b358a8 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 8.2E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_09251 5fbec8dcd504f118142d509c98b358a8 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 8.2E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_09251 5fbec8dcd504f118142d509c98b358a8 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 8.2E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Y11_20551 25355f118c95a57376c25b5f560ae896 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 3.0E-109 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Y11_20551 25355f118c95a57376c25b5f560ae896 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.209 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Y11_20551 25355f118c95a57376c25b5f560ae896 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 13-10-2018 IPR018215 ClpP, Ser active site Y11_20551 25355f118c95a57376c25b5f560ae896 207 Pfam PF00574 Clp protease 25 205 4.1E-90 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Y11_20551 25355f118c95a57376c25b5f560ae896 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 7.1E-53 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Y11_20551 25355f118c95a57376c25b5f560ae896 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 7.1E-53 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Y11_20551 25355f118c95a57376c25b5f560ae896 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 7.1E-53 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Y11_20551 25355f118c95a57376c25b5f560ae896 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 7.1E-53 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Y11_20551 25355f118c95a57376c25b5f560ae896 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 7.1E-53 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Y11_20551 25355f118c95a57376c25b5f560ae896 207 Gene3D G3DSA:3.90.226.10 6 207 1.5E-85 T 13-10-2018 Y11_20551 25355f118c95a57376c25b5f560ae896 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 13-10-2018 IPR033135 ClpP, histidine active site Y11_20551 25355f118c95a57376c25b5f560ae896 207 SUPERFAMILY SSF52096 23 206 3.11E-75 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Y11_21711 7850a62933f05dc8197337387e649268 528 Gene3D G3DSA:3.60.20.40 342 528 1.7E-71 T 13-10-2018 Y11_21711 7850a62933f05dc8197337387e649268 528 SUPERFAMILY SSF56235 6 528 7.72E-147 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_21711 7850a62933f05dc8197337387e649268 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 342 360 3.4E-26 T 13-10-2018 Y11_21711 7850a62933f05dc8197337387e649268 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 32 57 3.4E-26 T 13-10-2018 Y11_21711 7850a62933f05dc8197337387e649268 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 251 270 3.4E-26 T 13-10-2018 Y11_21711 7850a62933f05dc8197337387e649268 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 397 412 3.4E-26 T 13-10-2018 Y11_21711 7850a62933f05dc8197337387e649268 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 124 143 3.4E-26 T 13-10-2018 Y11_21711 7850a62933f05dc8197337387e649268 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 222 238 3.4E-26 T 13-10-2018 Y11_21711 7850a62933f05dc8197337387e649268 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 421 438 3.4E-26 T 13-10-2018 Y11_21711 7850a62933f05dc8197337387e649268 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 366 384 3.4E-26 T 13-10-2018 Y11_21711 7850a62933f05dc8197337387e649268 528 Pfam PF01019 Gamma-glutamyltranspeptidase 25 523 3.6E-129 T 13-10-2018 Y11_21711 7850a62933f05dc8197337387e649268 528 Gene3D G3DSA:1.10.246.130 238 340 8.0E-12 T 13-10-2018 Y11_30531 3c62d5f4d693699253fa800442b78e0c 390 Gene3D G3DSA:1.20.1720.10 1 383 1.6E-64 T 13-10-2018 Y11_30531 3c62d5f4d693699253fa800442b78e0c 390 SUPERFAMILY SSF103473 2 382 4.45E-50 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_30531 3c62d5f4d693699253fa800442b78e0c 390 Pfam PF07690 Major Facilitator Superfamily 6 345 9.1E-33 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_31641 39a0648326464d187231d15dd031366e 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 6.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_31641 39a0648326464d187231d15dd031366e 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 6.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_31641 39a0648326464d187231d15dd031366e 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 6.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_31641 39a0648326464d187231d15dd031366e 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 3.1E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_31641 39a0648326464d187231d15dd031366e 319 Pfam PF03466 LysR substrate binding domain 96 301 1.7E-38 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_31641 39a0648326464d187231d15dd031366e 319 SUPERFAMILY SSF53850 95 304 9.77E-42 T 13-10-2018 Y11_31641 39a0648326464d187231d15dd031366e 319 SUPERFAMILY SSF46785 12 119 2.04E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_31641 39a0648326464d187231d15dd031366e 319 Gene3D G3DSA:3.40.190.290 101 300 2.9E-55 T 13-10-2018 Y11_31641 39a0648326464d187231d15dd031366e 319 Gene3D G3DSA:1.10.10.10 11 100 7.1E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_21861 67ac7a13621f9492b362e806df893902 249 Pfam PF03942 DTW domain 45 229 1.6E-43 T 13-10-2018 IPR005636 DTW Y11_21861 67ac7a13621f9492b362e806df893902 249 SMART SM01144 42 234 2.4E-74 T 13-10-2018 IPR005636 DTW Y11_23401 740068810a0bc338c91648ccea888bee 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 2.2E-140 T 13-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 Y11_23401 740068810a0bc338c91648ccea888bee 376 Pfam PF06969 HemN C-terminal domain 304 364 2.3E-8 T 13-10-2018 IPR010723 HemN, C-terminal Y11_23401 740068810a0bc338c91648ccea888bee 376 Gene3D G3DSA:3.80.30.20 2 289 1.9E-97 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Y11_23401 740068810a0bc338c91648ccea888bee 376 Pfam PF04055 Radical SAM superfamily 11 179 1.5E-15 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_23401 740068810a0bc338c91648ccea888bee 376 SMART SM00729 6 223 5.0E-47 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Y11_23401 740068810a0bc338c91648ccea888bee 376 SUPERFAMILY SSF102114 5 376 7.46E-107 T 13-10-2018 Y11_00951 cc7fc710719d761ca650ded72693e41e 246 Gene3D G3DSA:3.40.50.2300 1 134 2.4E-29 T 13-10-2018 Y11_00951 cc7fc710719d761ca650ded72693e41e 246 SMART SM00448 1 112 6.8E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_00951 cc7fc710719d761ca650ded72693e41e 246 SUPERFAMILY SSF52172 2 132 4.13E-26 T 13-10-2018 IPR011006 CheY-like superfamily Y11_00951 cc7fc710719d761ca650ded72693e41e 246 SMART SM00850 147 245 1.3E-34 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Y11_00951 cc7fc710719d761ca650ded72693e41e 246 Pfam PF04397 LytTr DNA-binding domain 148 244 5.3E-30 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Y11_00951 cc7fc710719d761ca650ded72693e41e 246 Pfam PF00072 Response regulator receiver domain 4 112 8.6E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_00951 cc7fc710719d761ca650ded72693e41e 246 Gene3D G3DSA:2.40.50.40 139 206 5.0E-18 T 13-10-2018 Y11_42441 07a1d8f5b4157b9c53326c59eeba4866 227 Pfam PF12710 haloacid dehalogenase-like hydrolase 25 208 6.4E-13 T 13-10-2018 Y11_42441 07a1d8f5b4157b9c53326c59eeba4866 227 Gene3D G3DSA:3.40.50.1000 25 225 5.0E-13 T 13-10-2018 IPR023214 HAD superfamily Y11_42441 07a1d8f5b4157b9c53326c59eeba4866 227 SUPERFAMILY SSF56784 22 212 1.0E-9 T 13-10-2018 IPR036412 HAD-like superfamily Y11_42441 07a1d8f5b4157b9c53326c59eeba4866 227 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 19 227 5.4E-126 T 13-10-2018 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Y11_42441 07a1d8f5b4157b9c53326c59eeba4866 227 Gene3D G3DSA:1.20.1440.100 36 109 5.0E-13 T 13-10-2018 Y11_36941 50ce31433c3eb399b3a75b48f8b992c2 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 291 4.9E-12 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_36941 50ce31433c3eb399b3a75b48f8b992c2 294 Gene3D G3DSA:1.10.3720.10 51 293 9.2E-69 T 13-10-2018 IPR035906 MetI-like superfamily Y11_36941 50ce31433c3eb399b3a75b48f8b992c2 294 SUPERFAMILY SSF161098 55 282 3.4E-58 T 13-10-2018 IPR035906 MetI-like superfamily Y11_25421 b4c14517129bf96914f48ee4cc06832e 254 Pfam PF03237 Terminase-like family 40 219 5.2E-19 T 13-10-2018 IPR004921 Terminase large subunit, T4likevirus-type Y11_25421 b4c14517129bf96914f48ee4cc06832e 254 Gene3D G3DSA:3.40.50.300 11 181 6.5E-8 T 13-10-2018 Y11_13231 b4c14517129bf96914f48ee4cc06832e 254 Pfam PF03237 Terminase-like family 40 219 5.2E-19 T 13-10-2018 IPR004921 Terminase large subunit, T4likevirus-type Y11_13231 b4c14517129bf96914f48ee4cc06832e 254 Gene3D G3DSA:3.40.50.300 11 181 6.5E-8 T 13-10-2018 Y11_08981 a31efafe8248af19c33837cca8bbe1b2 109 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 101 2.5E-22 T 13-10-2018 IPR009241 Toxin HigB-like Y11_02261 3c4f060c758b2633a16cbc5d4b94fcfb 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 8.0E-37 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02261 3c4f060c758b2633a16cbc5d4b94fcfb 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 8.0E-37 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02261 3c4f060c758b2633a16cbc5d4b94fcfb 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 8.0E-37 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02261 3c4f060c758b2633a16cbc5d4b94fcfb 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 8.0E-37 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02261 3c4f060c758b2633a16cbc5d4b94fcfb 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 8.0E-37 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02261 3c4f060c758b2633a16cbc5d4b94fcfb 512 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 496 3.4E-181 T 13-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_02261 3c4f060c758b2633a16cbc5d4b94fcfb 512 Pfam PF00361 Proton-conducting membrane transporter 134 430 3.1E-70 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_18261 f38be37a289140fdde637865e36dec2f 46 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 18.592 T 13-10-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 Y11_18261 f38be37a289140fdde637865e36dec2f 46 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 45 1.8E-28 T 13-10-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 Y11_27691 b4f87201467b8a6846f9371a83fcfdf5 305 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 74 205 1.4E-51 T 13-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 Y11_29871 ce44e92cdf5d89b143f03834ab050ce4 245 Gene3D G3DSA:1.10.3720.10 7 241 1.1E-47 T 13-10-2018 IPR035906 MetI-like superfamily Y11_29871 ce44e92cdf5d89b143f03834ab050ce4 245 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 85 1.5E-16 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Y11_29871 ce44e92cdf5d89b143f03834ab050ce4 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 228 1.7E-12 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_29871 ce44e92cdf5d89b143f03834ab050ce4 245 SUPERFAMILY SSF161098 17 229 2.62E-39 T 13-10-2018 IPR035906 MetI-like superfamily Y11_19311 4d3c21f143418211aa045db10aae6b74 71 Pfam PF02416 mttA/Hcf106 family 4 46 6.7E-11 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Y11_19311 4d3c21f143418211aa045db10aae6b74 71 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 5.3E-18 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Y11_19311 4d3c21f143418211aa045db10aae6b74 71 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 71 27.861 T 13-10-2018 IPR024905 Sec-independent protein translocase protein TatE Y11_19311 4d3c21f143418211aa045db10aae6b74 71 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 68 18.836 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Y11_05171 fc8b3558213a51612e61d468a72e1a1f 81 SUPERFAMILY SSF54857 1 80 1.96E-28 T 13-10-2018 IPR036687 DinI-like superfamily Y11_05171 fc8b3558213a51612e61d468a72e1a1f 81 Gene3D G3DSA:3.30.910.10 1 81 2.4E-35 T 13-10-2018 IPR036687 DinI-like superfamily Y11_05171 fc8b3558213a51612e61d468a72e1a1f 81 Pfam PF06183 DinI-like family 14 78 5.8E-29 T 13-10-2018 IPR010391 DNA damage-inducible protein DinI-like Y11_39921 4c5d1f3636724b96261187089f45340d 962 Gene3D G3DSA:3.40.640.10 96 355 5.5E-97 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_39921 4c5d1f3636724b96261187089f45340d 962 Gene3D G3DSA:3.40.640.10 525 756 5.2E-60 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_39921 4c5d1f3636724b96261187089f45340d 962 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 958 25.409 T 13-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Y11_39921 4c5d1f3636724b96261187089f45340d 962 Pfam PF02347 Glycine cleavage system P-protein 477 739 2.0E-8 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Y11_39921 4c5d1f3636724b96261187089f45340d 962 Pfam PF02347 Glycine cleavage system P-protein 16 439 3.5E-180 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Y11_39921 4c5d1f3636724b96261187089f45340d 962 SUPERFAMILY SSF53383 17 440 2.42E-98 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_39921 4c5d1f3636724b96261187089f45340d 962 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 952 0.0 T 13-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Y11_39921 4c5d1f3636724b96261187089f45340d 962 Gene3D G3DSA:3.90.1150.10 767 903 5.7E-42 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_39921 4c5d1f3636724b96261187089f45340d 962 SUPERFAMILY SSF53383 477 953 1.02E-97 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_28711 694b7107474ec7306cf6baeae2180879 166 Gene3D G3DSA:1.20.120.1490 51 160 2.6E-41 T 13-10-2018 Y11_28711 694b7107474ec7306cf6baeae2180879 166 Pfam PF07813 LTXXQ motif family protein 51 146 7.7E-21 T 13-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 Y11_28711 694b7107474ec7306cf6baeae2180879 166 PIRSF PIRSF034445 2 156 2.1E-33 T 13-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 Y11_26371 43877f3a4fa9a18f9eb2bd3f7e44b76a 422 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 2.3E-182 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_26371 43877f3a4fa9a18f9eb2bd3f7e44b76a 422 Gene3D G3DSA:3.65.10.10 21 231 2.1E-171 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Y11_26371 43877f3a4fa9a18f9eb2bd3f7e44b76a 422 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 409 1.2E-125 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Y11_26371 43877f3a4fa9a18f9eb2bd3f7e44b76a 422 Gene3D G3DSA:3.65.10.10 7 416 2.1E-171 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Y11_26371 43877f3a4fa9a18f9eb2bd3f7e44b76a 422 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 44.05 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Y11_26371 43877f3a4fa9a18f9eb2bd3f7e44b76a 422 SUPERFAMILY SSF55205 1 421 9.65E-145 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Y11_36951 4626b8546301fb18fa95972aa93988c8 279 Gene3D G3DSA:1.10.3720.10 1 270 7.4E-61 T 13-10-2018 IPR035906 MetI-like superfamily Y11_36951 4626b8546301fb18fa95972aa93988c8 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 272 2.1E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_36951 4626b8546301fb18fa95972aa93988c8 279 SUPERFAMILY SSF161098 3 279 7.48E-66 T 13-10-2018 IPR035906 MetI-like superfamily Y11_40531 ad25bbd557956745582ed22142885f40 298 SUPERFAMILY SSF46785 7 79 1.96E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_40531 ad25bbd557956745582ed22142885f40 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.6E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_40531 ad25bbd557956745582ed22142885f40 298 Pfam PF03466 LysR substrate binding domain 88 291 1.4E-39 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_40531 ad25bbd557956745582ed22142885f40 298 Gene3D G3DSA:3.40.190.10 92 289 7.6E-61 T 13-10-2018 Y11_40531 ad25bbd557956745582ed22142885f40 298 SUPERFAMILY SSF53850 89 295 2.71E-43 T 13-10-2018 Y11_40531 ad25bbd557956745582ed22142885f40 298 Gene3D G3DSA:1.10.10.10 3 91 7.8E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_40531 ad25bbd557956745582ed22142885f40 298 Gene3D G3DSA:3.40.190.10 163 262 7.6E-61 T 13-10-2018 Y11_26311 59bae44fd6fb260a4d5ce88164b468cc 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.054 T 13-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Y11_26311 59bae44fd6fb260a4d5ce88164b468cc 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 13-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Y11_26311 59bae44fd6fb260a4d5ce88164b468cc 130 Gene3D G3DSA:3.30.230.10 1 130 6.7E-54 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y11_26311 59bae44fd6fb260a4d5ce88164b468cc 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 7.4E-46 T 13-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Y11_26311 59bae44fd6fb260a4d5ce88164b468cc 130 SUPERFAMILY SSF54211 5 130 3.3E-49 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_30881 d9c63293905ed9cd894fbf76a6fee191 101 SUPERFAMILY SSF46973 1 98 8.89E-35 T 13-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 Y11_30881 d9c63293905ed9cd894fbf76a6fee191 101 PIRSF PIRSF000699 1 101 2.4E-35 T 13-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 Y11_30881 d9c63293905ed9cd894fbf76a6fee191 101 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 98 4.2E-34 T 13-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 Y11_30881 d9c63293905ed9cd894fbf76a6fee191 101 Gene3D G3DSA:1.20.58.280 1 101 2.5E-36 T 13-10-2018 Y11_36451 7d38206f9287b25ac9b17ec19e539a06 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.6E-55 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Y11_36451 7d38206f9287b25ac9b17ec19e539a06 175 SUPERFAMILY SSF50324 3 175 4.45E-67 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Y11_36451 7d38206f9287b25ac9b17ec19e539a06 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.024 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Y11_36451 7d38206f9287b25ac9b17ec19e539a06 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Y11_36451 7d38206f9287b25ac9b17ec19e539a06 175 Gene3D G3DSA:3.90.80.10 2 175 1.4E-70 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Y11_41321 c1b08dce13f27befce24a055739dce6f 271 Pfam PF03180 NLPA lipoprotein 33 271 2.2E-98 T 13-10-2018 IPR004872 Lipoprotein NlpA family Y11_41321 c1b08dce13f27befce24a055739dce6f 271 Gene3D G3DSA:3.40.190.10 34 265 8.9E-101 T 13-10-2018 Y11_41321 c1b08dce13f27befce24a055739dce6f 271 SUPERFAMILY SSF53850 33 271 1.01E-82 T 13-10-2018 Y11_41321 c1b08dce13f27befce24a055739dce6f 271 Gene3D G3DSA:3.40.190.10 115 221 8.9E-101 T 13-10-2018 Y11_41321 c1b08dce13f27befce24a055739dce6f 271 PIRSF PIRSF002854 1 271 4.1E-105 T 13-10-2018 IPR004872 Lipoprotein NlpA family Y11_41321 c1b08dce13f27befce24a055739dce6f 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 7.5E-145 T 13-10-2018 IPR004872 Lipoprotein NlpA family Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 335 515 1.7E-69 T 13-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 PRINTS PR01900 YidC translocation/secretion protein signature 450 465 1.4E-29 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 PRINTS PR01900 YidC translocation/secretion protein signature 321 337 1.4E-29 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 PRINTS PR01900 YidC translocation/secretion protein signature 470 494 1.4E-29 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 Pfam PF02096 60Kd inner membrane protein 336 515 2.7E-60 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 Pfam PF14849 YidC periplasmic domain 44 325 1.6E-89 T 13-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 1 334 1.1E-111 T 13-10-2018 IPR028053 Membrane insertase YidC, N-terminal Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 PRINTS PR00701 60kDa inner membrane protein signature 233 248 1.8E-95 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 PRINTS PR00701 60kDa inner membrane protein signature 141 161 1.8E-95 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 PRINTS PR00701 60kDa inner membrane protein signature 49 70 1.8E-95 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 PRINTS PR00701 60kDa inner membrane protein signature 397 420 1.8E-95 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 PRINTS PR00701 60kDa inner membrane protein signature 200 218 1.8E-95 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 PRINTS PR00701 60kDa inner membrane protein signature 444 466 1.8E-95 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 PRINTS PR00701 60kDa inner membrane protein signature 481 504 1.8E-95 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 PRINTS PR00701 60kDa inner membrane protein signature 306 326 1.8E-95 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 16 517 24.817 T 13-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 Y11_30011 4d6a5d89abbf9a97013af39bc6efeaaa 531 Gene3D G3DSA:2.70.98.90 39 315 3.1E-109 T 13-10-2018 IPR038221 YidC, periplasmic domain superfamily Y11_39461 2672c67c43e1f71ae99ded405d04507c 220 Gene3D G3DSA:3.40.1050.10 1 219 2.0E-84 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Y11_39461 2672c67c43e1f71ae99ded405d04507c 220 SUPERFAMILY SSF53056 1 213 2.09E-71 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Y11_39461 2672c67c43e1f71ae99ded405d04507c 220 Pfam PF00484 Carbonic anhydrase 38 189 6.4E-50 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Y11_39461 2672c67c43e1f71ae99ded405d04507c 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 13-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Y11_39461 2672c67c43e1f71ae99ded405d04507c 220 SMART SM00947 30 193 2.2E-66 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Y11_39461 2672c67c43e1f71ae99ded405d04507c 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 13-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Y11_32421 7c3dcc53bf757a5c76340c5ccab66a41 108 Gene3D G3DSA:2.102.10.10 1 108 1.6E-31 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Y11_32421 7c3dcc53bf757a5c76340c5ccab66a41 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 107 4.0E-39 T 13-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 Y11_32421 7c3dcc53bf757a5c76340c5ccab66a41 108 SUPERFAMILY SSF50022 1 107 5.06E-35 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Y11_32421 7c3dcc53bf757a5c76340c5ccab66a41 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 5.9E-35 T 13-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 Y11_15431 ca2ed29353a05e18d844a3a5059bde9a 343 PIRSF PIRSF002825 1 340 3.1E-67 T 13-10-2018 IPR026045 Ferric binding protein Y11_15431 ca2ed29353a05e18d844a3a5059bde9a 343 Pfam PF13343 Bacterial extracellular solute-binding protein 76 284 8.4E-31 T 13-10-2018 Y11_15431 ca2ed29353a05e18d844a3a5059bde9a 343 Gene3D G3DSA:3.40.190.10 133 320 2.1E-117 T 13-10-2018 Y11_15431 ca2ed29353a05e18d844a3a5059bde9a 343 Gene3D G3DSA:3.40.190.10 31 306 2.1E-117 T 13-10-2018 Y11_15431 ca2ed29353a05e18d844a3a5059bde9a 343 SUPERFAMILY SSF53850 24 328 2.47E-69 T 13-10-2018 Y11_07741 b45005a060fd11b7914b092dfa5cb3e0 220 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 75 103 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Y11_07741 b45005a060fd11b7914b092dfa5cb3e0 220 SUPERFAMILY SSF53955 53 217 2.34E-29 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Y11_07741 b45005a060fd11b7914b092dfa5cb3e0 220 Gene3D G3DSA:1.10.530.10 43 218 9.0E-45 T 13-10-2018 Y11_07741 b45005a060fd11b7914b092dfa5cb3e0 220 Pfam PF01464 Transglycosylase SLT domain 57 182 3.5E-28 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Y11_18111 d00c8a1d0f8cd4bafb9a4b8c8f3fc0f1 82 Pfam PF09905 DNA-binding protein VF530 7 68 1.1E-35 T 13-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 Y11_18111 d00c8a1d0f8cd4bafb9a4b8c8f3fc0f1 82 Gene3D G3DSA:1.10.720.30 14 73 2.5E-32 T 13-10-2018 IPR036361 SAP domain superfamily Y11_28961 fbbf586ef666696b4990ee4251ee5023 55 Pfam PF00471 Ribosomal protein L33 7 53 8.8E-19 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_28961 fbbf586ef666696b4990ee4251ee5023 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 13-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_28961 fbbf586ef666696b4990ee4251ee5023 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.908 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_28961 fbbf586ef666696b4990ee4251ee5023 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 8.4E-28 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_28961 fbbf586ef666696b4990ee4251ee5023 55 SUPERFAMILY SSF57829 1 53 3.72E-20 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Y11_28961 fbbf586ef666696b4990ee4251ee5023 55 Gene3D G3DSA:2.20.28.120 1 55 2.8E-31 T 13-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_34401 795a23a8472c582dd5745cc7c28908e3 227 Gene3D G3DSA:2.60.40.10 23 152 2.5E-28 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_34401 795a23a8472c582dd5745cc7c28908e3 227 SUPERFAMILY SSF49354 20 129 1.2E-7 T 13-10-2018 IPR008962 PapD-like superfamily Y11_34401 795a23a8472c582dd5745cc7c28908e3 227 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 133 8.2E-5 T 13-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Y11_41081 9ad8e9d7553227118b39627829173e3c 273 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 230 256 - T 13-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 Y11_41081 9ad8e9d7553227118b39627829173e3c 273 Pfam PF01148 Cytidylyltransferase family 2 270 3.0E-66 T 13-10-2018 Y11_39131 7194717080adb87eabf71218738b22d0 177 PIRSF PIRSF004572 1 177 3.9E-85 T 13-10-2018 IPR009502 Secretion monitor GO:0045182 Y11_39131 7194717080adb87eabf71218738b22d0 177 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 174 1.4E-58 T 13-10-2018 IPR009502 Secretion monitor GO:0045182 Y11_39131 7194717080adb87eabf71218738b22d0 177 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 176 7.0E-80 T 13-10-2018 IPR009502 Secretion monitor GO:0045182 Y11_39131 7194717080adb87eabf71218738b22d0 177 Hamap MF_01332 Secretion monitor [secM]. 1 177 42.595 T 13-10-2018 IPR009502 Secretion monitor GO:0045182 Y11_13271 da2c6a25a7c47050305568ddba33cfc5 219 Pfam PF05944 Phage small terminase subunit 35 164 1.6E-44 T 13-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 Y11_25381 da2c6a25a7c47050305568ddba33cfc5 219 Pfam PF05944 Phage small terminase subunit 35 164 1.6E-44 T 13-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 Y11_13741 6b79008aaf2dce4a676e0eec13a177df 182 SMART SM00903 31 176 5.7E-48 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Y11_13741 6b79008aaf2dce4a676e0eec13a177df 182 TIGRFAM TIGR03615 RutF: pyrimidine utilization flavin reductase protein F 22 176 1.4E-79 T 13-10-2018 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 Y11_13741 6b79008aaf2dce4a676e0eec13a177df 182 Hamap MF_00833 FMN reductase (NADH) RutF [rutF]. 19 182 42.945 T 13-10-2018 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 Y11_13741 6b79008aaf2dce4a676e0eec13a177df 182 Gene3D G3DSA:2.30.110.10 14 180 2.0E-43 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Y11_13741 6b79008aaf2dce4a676e0eec13a177df 182 SUPERFAMILY SSF50475 22 176 4.12E-43 T 13-10-2018 Y11_13741 6b79008aaf2dce4a676e0eec13a177df 182 Pfam PF01613 Flavin reductase like domain 31 177 2.0E-28 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Y11_26041 17510be9dc09ba2f6f8e6aafadc16414 300 SUPERFAMILY SSF46785 4 85 1.38E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_26041 17510be9dc09ba2f6f8e6aafadc16414 300 Gene3D G3DSA:1.10.10.10 5 92 9.2E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_26041 17510be9dc09ba2f6f8e6aafadc16414 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_26041 17510be9dc09ba2f6f8e6aafadc16414 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_26041 17510be9dc09ba2f6f8e6aafadc16414 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_26041 17510be9dc09ba2f6f8e6aafadc16414 300 Gene3D G3DSA:3.40.190.10 94 293 1.6E-54 T 13-10-2018 Y11_26041 17510be9dc09ba2f6f8e6aafadc16414 300 SUPERFAMILY SSF53850 92 294 5.61E-42 T 13-10-2018 Y11_26041 17510be9dc09ba2f6f8e6aafadc16414 300 Pfam PF03466 LysR substrate binding domain 90 294 1.5E-39 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_26041 17510be9dc09ba2f6f8e6aafadc16414 300 Gene3D G3DSA:3.40.190.10 166 269 1.6E-54 T 13-10-2018 Y11_26041 17510be9dc09ba2f6f8e6aafadc16414 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.7E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_09361 306810739aaf899d9b75deddebcef263 205 Pfam PF01548 Transposase 16 156 1.2E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_35451 37b76150f3c8dc76a7fdb981838e9eff 216 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_35451 37b76150f3c8dc76a7fdb981838e9eff 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 2.3E-69 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_35451 37b76150f3c8dc76a7fdb981838e9eff 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 2.3E-69 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_35451 37b76150f3c8dc76a7fdb981838e9eff 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 2.3E-69 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_35451 37b76150f3c8dc76a7fdb981838e9eff 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 2.3E-69 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_35451 37b76150f3c8dc76a7fdb981838e9eff 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 2.3E-69 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_35451 37b76150f3c8dc76a7fdb981838e9eff 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 2.3E-69 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_35451 37b76150f3c8dc76a7fdb981838e9eff 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 5.9E-85 T 13-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 Y11_35451 37b76150f3c8dc76a7fdb981838e9eff 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_35451 37b76150f3c8dc76a7fdb981838e9eff 216 Pfam PF00813 FliP family 13 211 2.2E-65 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Y11_32721 b79a6085747e41c9648775c7952f5a76 602 Gene3D G3DSA:3.40.50.720 400 561 3.6E-35 T 13-10-2018 Y11_32721 b79a6085747e41c9648775c7952f5a76 602 Pfam PF02254 TrkA-N domain 403 513 3.2E-24 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Y11_32721 b79a6085747e41c9648775c7952f5a76 602 Gene3D G3DSA:1.20.1530.20 3 385 9.5E-82 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily Y11_32721 b79a6085747e41c9648775c7952f5a76 602 SUPERFAMILY SSF51735 402 529 6.05E-30 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_32721 b79a6085747e41c9648775c7952f5a76 602 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 3.4E-88 T 13-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 Y11_32721 b79a6085747e41c9648775c7952f5a76 602 Pfam PF00999 Sodium/hydrogen exchanger family 10 373 1.0E-65 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Y11_32721 b79a6085747e41c9648775c7952f5a76 602 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 599 50.22 T 13-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 Y11_09661 66d3f21411c965bc22a49374716bcdd9 350 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 2 338 1.2E-77 T 13-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 Y11_09661 66d3f21411c965bc22a49374716bcdd9 350 Pfam PF05155 Phage X family 253 336 4.6E-31 T 13-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 Y11_09661 66d3f21411c965bc22a49374716bcdd9 350 Pfam PF05144 Phage replication protein CRI 1 230 5.2E-68 T 13-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 Y11_20591 0df897e9a7a61e43c5db9bc159296697 475 TIGRFAM TIGR00901 2A0125: AmpG-like permease 8 346 6.5E-118 T 13-10-2018 Y11_20591 0df897e9a7a61e43c5db9bc159296697 475 Pfam PF07690 Major Facilitator Superfamily 2 349 3.0E-32 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_20591 0df897e9a7a61e43c5db9bc159296697 475 Gene3D G3DSA:1.20.1250.20 1 184 1.5E-16 T 13-10-2018 Y11_20591 0df897e9a7a61e43c5db9bc159296697 475 SUPERFAMILY SSF103473 2 387 4.19E-44 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_20591 0df897e9a7a61e43c5db9bc159296697 475 Gene3D G3DSA:1.20.1250.20 197 394 6.3E-16 T 13-10-2018 Y11_15051 07c48700f17fc1530e6e7cbf7bb7de56 500 Gene3D G3DSA:1.10.10.60 7 41 6.2E-6 T 13-10-2018 Y11_15051 07c48700f17fc1530e6e7cbf7bb7de56 500 Pfam PF00665 Integrase core domain 146 254 8.1E-16 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_15051 07c48700f17fc1530e6e7cbf7bb7de56 500 SUPERFAMILY SSF53098 155 277 1.37E-5 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_35591 b9e8149b44c90d9cab3776d7ade70b26 581 SMART SM00382 398 574 8.1E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_35591 b9e8149b44c90d9cab3776d7ade70b26 581 Pfam PF06472 ABC transporter transmembrane region 2 14 303 9.0E-48 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Y11_35591 b9e8149b44c90d9cab3776d7ade70b26 581 Gene3D G3DSA:3.40.50.300 378 579 7.4E-41 T 13-10-2018 Y11_35591 b9e8149b44c90d9cab3776d7ade70b26 581 SUPERFAMILY SSF52540 381 573 2.51E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_35591 b9e8149b44c90d9cab3776d7ade70b26 581 Pfam PF00005 ABC transporter 389 522 1.5E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_35591 b9e8149b44c90d9cab3776d7ade70b26 581 SUPERFAMILY SSF90123 35 360 5.23E-20 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_35591 b9e8149b44c90d9cab3776d7ade70b26 581 ProSitePatterns PS00211 ABC transporters family signature. 494 508 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_28471 6a6e8b9304d01171332e56ff9b8dae3d 172 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 4 171 2.5E-53 T 13-10-2018 IPR006498 Tail tube protein Y11_28471 6a6e8b9304d01171332e56ff9b8dae3d 172 Pfam PF04985 Phage tail tube protein FII 4 171 4.3E-65 T 13-10-2018 IPR006498 Tail tube protein Y11_04161 e8fd1e4c79be61651340ed5d00e22273 213 SMART SM00870 1 207 2.1E-32 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Y11_04161 e8fd1e4c79be61651340ed5d00e22273 213 SUPERFAMILY SSF53774 1 211 1.44E-62 T 13-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 Y11_04161 e8fd1e4c79be61651340ed5d00e22273 213 Gene3D G3DSA:3.40.50.40 100 213 5.3E-44 T 13-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 Y11_04161 e8fd1e4c79be61651340ed5d00e22273 213 Pfam PF00710 Asparaginase, N-terminal 1 83 1.2E-21 T 13-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 Y11_04161 e8fd1e4c79be61651340ed5d00e22273 213 Gene3D G3DSA:3.40.50.1170 1 99 7.0E-30 T 13-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 Y11_17221 07d383db6b5f8c4bfd7d3a445e390455 390 SUPERFAMILY SSF103473 6 377 1.19E-22 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_17221 07d383db6b5f8c4bfd7d3a445e390455 390 Gene3D G3DSA:1.20.1250.20 1 380 2.5E-14 T 13-10-2018 Y11_17221 07d383db6b5f8c4bfd7d3a445e390455 390 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 13 370 1.8E-89 T 13-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB Y11_31831 1f1a85cbaf2b7e99bfbaee03a68845f7 565 SUPERFAMILY SSF55781 236 357 5.4E-5 T 13-10-2018 Y11_31831 1f1a85cbaf2b7e99bfbaee03a68845f7 565 Pfam PF06580 Histidine kinase 373 450 2.7E-25 T 13-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Y11_31831 1f1a85cbaf2b7e99bfbaee03a68845f7 565 SUPERFAMILY SSF55874 426 558 9.9E-12 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_31831 1f1a85cbaf2b7e99bfbaee03a68845f7 565 Gene3D G3DSA:3.30.565.10 425 559 4.4E-11 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Y11_31831 1f1a85cbaf2b7e99bfbaee03a68845f7 565 Pfam PF07694 5TMR of 5TMR-LYT 30 198 3.4E-58 T 13-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 Y11_32451 6145ac86ae0688ce91a27f0d74f0ee5c 431 SUPERFAMILY SSF51556 62 381 2.04E-106 T 13-10-2018 IPR032466 Metal-dependent hydrolase Y11_32451 6145ac86ae0688ce91a27f0d74f0ee5c 431 Gene3D G3DSA:2.30.40.10 16 416 2.5E-182 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_32451 6145ac86ae0688ce91a27f0d74f0ee5c 431 Gene3D G3DSA:3.20.20.140 63 370 2.5E-182 T 13-10-2018 Y11_32451 6145ac86ae0688ce91a27f0d74f0ee5c 431 SUPERFAMILY SSF51338 11 70 3.22E-8 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Y11_32451 6145ac86ae0688ce91a27f0d74f0ee5c 431 Pfam PF07969 Amidohydrolase family 51 410 2.2E-51 T 13-10-2018 IPR013108 Amidohydrolase 3 Y11_36141 575331afe4d6e3ac0df0f88d9c03468d 427 Pfam PF12221 Bacterial membrane protein N terminal 1 61 1.4E-14 T 13-10-2018 IPR020980 Menbrane protein HflK, N-terminal Y11_36141 575331afe4d6e3ac0df0f88d9c03468d 427 SMART SM00244 99 259 1.4E-41 T 13-10-2018 IPR001107 Band 7 domain Y11_36141 575331afe4d6e3ac0df0f88d9c03468d 427 Gene3D G3DSA:3.30.479.30 128 261 2.6E-18 T 13-10-2018 Y11_36141 575331afe4d6e3ac0df0f88d9c03468d 427 PRINTS PR00721 Stomatin signature 106 128 1.9E-7 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Y11_36141 575331afe4d6e3ac0df0f88d9c03468d 427 PRINTS PR00721 Stomatin signature 188 205 1.9E-7 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Y11_36141 575331afe4d6e3ac0df0f88d9c03468d 427 PRINTS PR00721 Stomatin signature 153 174 1.9E-7 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Y11_36141 575331afe4d6e3ac0df0f88d9c03468d 427 SUPERFAMILY SSF117892 132 263 6.8E-20 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily Y11_36141 575331afe4d6e3ac0df0f88d9c03468d 427 TIGRFAM TIGR01933 hflK: HflK protein 101 360 2.6E-120 T 13-10-2018 IPR010201 HflK GO:0016021 Y11_36141 575331afe4d6e3ac0df0f88d9c03468d 427 Pfam PF01145 SPFH domain / Band 7 family 103 274 1.3E-30 T 13-10-2018 IPR001107 Band 7 domain Y11_07421 9879f3d64bbe4e867893f845e8bce2cd 459 Gene3D G3DSA:1.20.1250.20 260 455 5.5E-20 T 13-10-2018 Y11_07421 9879f3d64bbe4e867893f845e8bce2cd 459 Pfam PF07690 Major Facilitator Superfamily 21 412 2.0E-46 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_07421 9879f3d64bbe4e867893f845e8bce2cd 459 SUPERFAMILY SSF103473 10 450 1.12E-61 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_07421 9879f3d64bbe4e867893f845e8bce2cd 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 4.2E-9 T 13-10-2018 Y11_07421 9879f3d64bbe4e867893f845e8bce2cd 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 4.2E-9 T 13-10-2018 Y11_07421 9879f3d64bbe4e867893f845e8bce2cd 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 4.2E-9 T 13-10-2018 Y11_07421 9879f3d64bbe4e867893f845e8bce2cd 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 4.2E-9 T 13-10-2018 Y11_07421 9879f3d64bbe4e867893f845e8bce2cd 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 4.2E-9 T 13-10-2018 Y11_07421 9879f3d64bbe4e867893f845e8bce2cd 459 Gene3D G3DSA:1.20.1720.10 18 250 7.1E-44 T 13-10-2018 Y11_22341 60c36c6847d504b70c6f6aa462ba8b2f 388 Gene3D G3DSA:3.40.50.2300 9 338 6.8E-119 T 13-10-2018 Y11_22341 60c36c6847d504b70c6f6aa462ba8b2f 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 3.9E-6 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Y11_22341 60c36c6847d504b70c6f6aa462ba8b2f 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 315 330 3.9E-6 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Y11_22341 60c36c6847d504b70c6f6aa462ba8b2f 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 237 255 3.9E-6 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Y11_22341 60c36c6847d504b70c6f6aa462ba8b2f 388 Gene3D G3DSA:3.40.50.2300 122 357 6.8E-119 T 13-10-2018 Y11_22341 60c36c6847d504b70c6f6aa462ba8b2f 388 SUPERFAMILY SSF53822 6 368 1.01E-79 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_22341 60c36c6847d504b70c6f6aa462ba8b2f 388 Pfam PF13433 Periplasmic binding protein domain 8 369 5.8E-127 T 13-10-2018 Y11_32971 3da9d981e3ac4c5e9b7128b68aedf958 104 SMART SM01374 1 104 2.6E-62 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Y11_32971 3da9d981e3ac4c5e9b7128b68aedf958 104 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 104 1.1E-48 T 13-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Y11_32971 3da9d981e3ac4c5e9b7128b68aedf958 104 Gene3D G3DSA:2.40.150.20 1 104 4.7E-46 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Y11_32971 3da9d981e3ac4c5e9b7128b68aedf958 104 Pfam PF00238 Ribosomal protein L14p/L23e 1 104 3.2E-43 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Y11_32971 3da9d981e3ac4c5e9b7128b68aedf958 104 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 104 17.695 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Y11_32971 3da9d981e3ac4c5e9b7128b68aedf958 104 ProSitePatterns PS00049 Ribosomal protein L14 signature. 41 67 - T 13-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Y11_32971 3da9d981e3ac4c5e9b7128b68aedf958 104 SUPERFAMILY SSF50193 1 103 7.72E-42 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Y11_13821 d9eaee70e528971c6afc1b91cd006983 433 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 72 419 6.8E-99 T 13-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 Y11_13821 d9eaee70e528971c6afc1b91cd006983 433 Pfam PF04261 Dyp-type peroxidase family 72 419 4.5E-109 T 13-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 Y11_13821 d9eaee70e528971c6afc1b91cd006983 433 SUPERFAMILY SSF54909 65 425 5.36E-95 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Y11_13821 d9eaee70e528971c6afc1b91cd006983 433 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 15 432 2.8E-168 T 13-10-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 Y11_24671 3a629e7b59826158d775b183fe858852 249 SUPERFAMILY SSF48452 49 219 4.69E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_24671 3a629e7b59826158d775b183fe858852 249 Gene3D G3DSA:1.25.40.10 22 243 6.1E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.984 T 13-10-2018 IPR026593 Protein translocase subunit SecY Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Pfam PF00344 SecY translocase 76 417 1.3E-119 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 1.3E-98 T 13-10-2018 Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 1.3E-98 T 13-10-2018 Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 1.3E-98 T 13-10-2018 Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 1.3E-98 T 13-10-2018 Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 1.3E-98 T 13-10-2018 Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.3E-98 T 13-10-2018 Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.3E-98 T 13-10-2018 Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.3E-98 T 13-10-2018 Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 1.3E-98 T 13-10-2018 Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PIRSF PIRSF004557 11 441 1.6E-123 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Gene3D G3DSA:1.10.3370.10 13 429 1.9E-164 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 SUPERFAMILY SSF103491 16 424 6.28E-134 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Y11_33071 c9ddd3ae7a6ecd2a11613e657fea94a3 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 2.9E-141 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Y11_16441 ed5d136f769bba552eeb3dc5cc028ec2 370 Pfam PF07993 Male sterility protein 7 238 8.2E-33 T 13-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 Y11_16441 ed5d136f769bba552eeb3dc5cc028ec2 370 SUPERFAMILY SSF51735 3 354 3.28E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_16441 ed5d136f769bba552eeb3dc5cc028ec2 370 Gene3D G3DSA:3.40.50.720 2 305 6.5E-48 T 13-10-2018 Y11_05261 7009807ee1027ec40dc574f973644237 302 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 91 168 6.1E-31 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Y11_05261 7009807ee1027ec40dc574f973644237 302 Gene3D G3DSA:3.40.47.10 1 302 1.4E-117 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_05261 7009807ee1027ec40dc574f973644237 302 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 213 301 4.5E-36 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Y11_05261 7009807ee1027ec40dc574f973644237 302 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 302 3.2E-139 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Y11_05261 7009807ee1027ec40dc574f973644237 302 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 302 66.191 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Y11_05261 7009807ee1027ec40dc574f973644237 302 SUPERFAMILY SSF53901 7 302 3.59E-68 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Y11_06891 b17ba20ca9e0809b3411ebb34b1d62a2 385 Pfam PF02687 FtsX-like permease family 290 378 8.4E-11 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Y11_06891 b17ba20ca9e0809b3411ebb34b1d62a2 385 Pfam PF12704 MacB-like periplasmic core domain 37 201 2.3E-11 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Y11_18671 a39bdbe8e20717330bac584cf45daeeb 339 Pfam PF06166 Protein of unknown function (DUF979) 6 338 5.2E-130 T 13-10-2018 IPR009323 Protein of unknown function DUF979 Y11_15321 559dc1713581aeb5e60d1ff487944fc8 331 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 26 300 2.0E-104 T 13-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 Y11_15321 559dc1713581aeb5e60d1ff487944fc8 331 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 10 331 194.31 T 13-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 Y11_15321 559dc1713581aeb5e60d1ff487944fc8 331 Gene3D G3DSA:1.10.4200.10 186 302 1.5E-5 T 13-10-2018 Y11_15321 559dc1713581aeb5e60d1ff487944fc8 331 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 29 299 1.4E-83 T 13-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 Y11_39251 e80998942441de5317c2c2538edf83ff 284 SUPERFAMILY SSF90123 9 200 1.96E-5 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_39251 e80998942441de5317c2c2538edf83ff 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 6.0E-161 T 13-10-2018 IPR031347 Protein AmpE Y11_10411 50c49ac9d2b6306f0b42d64ecde051fc 47 Pfam PF04328 Selenoprotein, putative 1 47 4.4E-18 T 13-10-2018 IPR007423 Selenoprotein, putative Y11_30851 50393dcd908d76971462a1579e029e70 424 Pfam PF02378 Phosphotransferase system, EIIC 34 346 9.6E-47 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Y11_30851 50393dcd908d76971462a1579e029e70 424 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 17 421 1.7E-88 T 13-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 Y11_30851 50393dcd908d76971462a1579e029e70 424 PIRSF PIRSF006351 6 424 1.0E-109 T 13-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 Y11_02581 519867df970945c989b990a320125346 501 Gene3D G3DSA:2.150.10.10 105 293 1.6E-14 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_02581 519867df970945c989b990a320125346 501 Pfam PF01483 Proprotein convertase P-domain 7 101 3.8E-21 T 13-10-2018 IPR002884 P domain GO:0004252|GO:0006508 Y11_02581 519867df970945c989b990a320125346 501 Gene3D G3DSA:2.60.120.260 1 104 1.9E-26 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Y11_02581 519867df970945c989b990a320125346 501 Pfam PF08548 Peptidase M10 serralysin C terminal 139 388 3.7E-6 T 13-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 Y11_02581 519867df970945c989b990a320125346 501 SUPERFAMILY SSF51120 140 289 3.66E-16 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Y11_02581 519867df970945c989b990a320125346 501 SUPERFAMILY SSF49785 5 106 1.62E-21 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Y11_13501 97c8073cadce188231620a08a1f40fcc 388 SUPERFAMILY SSF69279 15 188 4.82E-26 T 13-10-2018 Y11_13501 97c8073cadce188231620a08a1f40fcc 388 Pfam PF05954 Phage late control gene D protein (GPD) 67 367 9.7E-32 T 13-10-2018 Y11_08561 922eccdaa5fec4bf701e97a7977085dc 117 Gene3D G3DSA:3.10.180.10 10 116 8.5E-19 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y11_08561 922eccdaa5fec4bf701e97a7977085dc 117 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 111 3.0E-8 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y11_08561 922eccdaa5fec4bf701e97a7977085dc 117 SUPERFAMILY SSF54593 9 116 3.09E-24 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y11_40341 c78e904a942834f936aafc013ee12255 501 Pfam PF00437 Type II/IV secretion system protein 121 386 1.1E-84 T 13-10-2018 IPR001482 Type II/IV secretion system protein Y11_40341 c78e904a942834f936aafc013ee12255 501 Gene3D G3DSA:3.40.50.300 220 499 2.0E-109 T 13-10-2018 Y11_40341 c78e904a942834f936aafc013ee12255 501 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 11 492 6.3E-194 T 13-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 Y11_40341 c78e904a942834f936aafc013ee12255 501 SMART SM00382 247 368 0.0024 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_40341 c78e904a942834f936aafc013ee12255 501 Gene3D G3DSA:3.30.300.160 1 85 5.8E-9 T 13-10-2018 Y11_40341 c78e904a942834f936aafc013ee12255 501 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 314 328 - T 13-10-2018 IPR001482 Type II/IV secretion system protein Y11_40341 c78e904a942834f936aafc013ee12255 501 SUPERFAMILY SSF52540 103 491 5.62E-96 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_40341 c78e904a942834f936aafc013ee12255 501 Gene3D G3DSA:3.30.450.90 86 219 5.3E-48 T 13-10-2018 Y11_40341 c78e904a942834f936aafc013ee12255 501 SUPERFAMILY SSF160246 10 73 4.18E-13 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Y11_18141 8da97e2398e8ac6ccfdb0f00ebfc06fb 235 SMART SM00382 26 217 7.7E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_18141 8da97e2398e8ac6ccfdb0f00ebfc06fb 235 SUPERFAMILY SSF52540 2 227 6.32E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_18141 8da97e2398e8ac6ccfdb0f00ebfc06fb 235 Gene3D G3DSA:3.40.50.300 1 233 1.4E-50 T 13-10-2018 Y11_18141 8da97e2398e8ac6ccfdb0f00ebfc06fb 235 Pfam PF00005 ABC transporter 19 164 8.3E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_14251 061fbf08960008801292aea31a27631f 452 Gene3D G3DSA:3.30.750.140 296 409 1.2E-37 T 13-10-2018 IPR038610 FliK-like, C-terminal domain superfamily Y11_14251 061fbf08960008801292aea31a27631f 452 Pfam PF02120 Flagellar hook-length control protein FliK 316 398 5.3E-21 T 13-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Y11_14251 061fbf08960008801292aea31a27631f 452 PRINTS PR01007 Flagellar hook-length control protein signature 306 328 7.3E-38 T 13-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 Y11_14251 061fbf08960008801292aea31a27631f 452 PRINTS PR01007 Flagellar hook-length control protein signature 349 364 7.3E-38 T 13-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 Y11_14251 061fbf08960008801292aea31a27631f 452 PRINTS PR01007 Flagellar hook-length control protein signature 283 305 7.3E-38 T 13-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 Y11_14251 061fbf08960008801292aea31a27631f 452 PRINTS PR01007 Flagellar hook-length control protein signature 55 68 7.3E-38 T 13-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 Y11_14251 061fbf08960008801292aea31a27631f 452 PRINTS PR01007 Flagellar hook-length control protein signature 331 349 7.3E-38 T 13-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 Y11_14251 061fbf08960008801292aea31a27631f 452 PRINTS PR01007 Flagellar hook-length control protein signature 364 387 7.3E-38 T 13-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 Y11_39041 f9836d1d35f365302bf8dd4828c3bf00 400 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 29 396 42.031 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_39041 f9836d1d35f365302bf8dd4828c3bf00 400 Pfam PF01098 Cell cycle protein 33 387 2.4E-123 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_39041 f9836d1d35f365302bf8dd4828c3bf00 400 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 31 386 1.8E-134 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_39041 f9836d1d35f365302bf8dd4828c3bf00 400 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 345 369 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Y11_38351 1b5d1d02dc70209ff5ec273b5b8f8259 258 Pfam PF03883 Peroxide stress protein YaaA 1 242 3.6E-92 T 13-10-2018 IPR005583 Peroxide stress protein YaaA Y11_38351 1b5d1d02dc70209ff5ec273b5b8f8259 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.107 T 13-10-2018 IPR005583 Peroxide stress protein YaaA Y11_21221 3c73f2e31f84c413d0b98bb484e089fe 249 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 4 242 28.016 T 13-10-2018 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 Y11_21221 3c73f2e31f84c413d0b98bb484e089fe 249 Pfam PF07238 PilZ domain 115 233 6.0E-10 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Y11_21221 3c73f2e31f84c413d0b98bb484e089fe 249 Pfam PF07317 Flagellar regulator YcgR 9 112 2.0E-29 T 13-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal Y11_21221 3c73f2e31f84c413d0b98bb484e089fe 249 Gene3D G3DSA:2.40.10.220 117 244 3.5E-32 T 13-10-2018 Y11_17441 2f34cd654a64d2cf697173bed5341740 184 Gene3D G3DSA:1.10.1740.10 9 91 3.5E-27 T 13-10-2018 Y11_17441 2f34cd654a64d2cf697173bed5341740 184 Pfam PF08281 Sigma-70, region 4 127 178 2.6E-13 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Y11_17441 2f34cd654a64d2cf697173bed5341740 184 SUPERFAMILY SSF88946 8 106 1.44E-22 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Y11_17441 2f34cd654a64d2cf697173bed5341740 184 Gene3D G3DSA:1.10.10.10 92 184 6.7E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_17441 2f34cd654a64d2cf697173bed5341740 184 SUPERFAMILY SSF88659 120 182 3.05E-14 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Y11_17441 2f34cd654a64d2cf697173bed5341740 184 Pfam PF04542 Sigma-70 region 2 27 93 5.2E-14 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Y11_17441 2f34cd654a64d2cf697173bed5341740 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 181 7.9E-28 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Y11_21491 c09e635af83f0e2929db758ae8ab1c22 193 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.631 T 13-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 Y11_21491 c09e635af83f0e2929db758ae8ab1c22 193 Gene3D G3DSA:3.40.50.10490 1 192 1.2E-72 T 13-10-2018 Y11_21491 c09e635af83f0e2929db758ae8ab1c22 193 SUPERFAMILY SSF53697 1 189 1.13E-52 T 13-10-2018 Y11_21491 c09e635af83f0e2929db758ae8ab1c22 193 Pfam PF13580 SIS domain 14 146 3.6E-32 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_21491 c09e635af83f0e2929db758ae8ab1c22 193 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 3.7E-84 T 13-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 Y11_43481 e06b813407bff967df2c09f658829ed7 429 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 404 4.4E-128 T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Y11_43481 e06b813407bff967df2c09f658829ed7 429 Pfam PF00860 Permease family 16 382 2.4E-105 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Y11_43481 e06b813407bff967df2c09f658829ed7 429 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Y11_19751 aca0f9e3099db17dc4791ac5fe2c7879 211 Gene3D G3DSA:3.40.50.1110 27 211 9.5E-72 T 13-10-2018 IPR036514 SGNH hydrolase superfamily Y11_19751 aca0f9e3099db17dc4791ac5fe2c7879 211 SUPERFAMILY SSF52266 29 206 6.91E-51 T 13-10-2018 Y11_19751 aca0f9e3099db17dc4791ac5fe2c7879 211 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 30 40 - T 13-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 Y11_19751 aca0f9e3099db17dc4791ac5fe2c7879 211 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 33 190 3.3E-24 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain Y11_05321 d1899506e9d867c9f06da638d4bee676 341 Pfam PF02618 YceG-like family 44 329 8.0E-83 T 13-10-2018 IPR003770 Endolytic murein transglycosylase Y11_05321 d1899506e9d867c9f06da638d4bee676 341 Gene3D G3DSA:3.30.160.60 72 110 1.8E-23 T 13-10-2018 Y11_05321 d1899506e9d867c9f06da638d4bee676 341 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 9 333 33.514 T 13-10-2018 IPR003770 Endolytic murein transglycosylase Y11_05321 d1899506e9d867c9f06da638d4bee676 341 Gene3D G3DSA:3.30.160.60 303 341 8.1E-21 T 13-10-2018 Y11_05321 d1899506e9d867c9f06da638d4bee676 341 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 17 337 4.8E-122 T 13-10-2018 IPR003770 Endolytic murein transglycosylase Y11_26571 622cf914b13e78c09118e6b25822c615 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 103 149 6.9E-20 T 13-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal Y11_26571 622cf914b13e78c09118e6b25822c615 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 151 3.4E-65 T 13-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 Y11_26571 622cf914b13e78c09118e6b25822c615 154 Gene3D G3DSA:3.30.70.140 1 100 7.6E-37 T 13-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily Y11_26571 622cf914b13e78c09118e6b25822c615 154 SUPERFAMILY SSF54893 1 100 4.58E-35 T 13-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily Y11_26571 622cf914b13e78c09118e6b25822c615 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-45 T 13-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal Y11_26571 622cf914b13e78c09118e6b25822c615 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 2.5E-29 T 13-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal Y11_26571 622cf914b13e78c09118e6b25822c615 154 Gene3D G3DSA:2.30.30.20 101 153 1.4E-25 T 13-10-2018 Y11_26571 622cf914b13e78c09118e6b25822c615 154 SUPERFAMILY SSF57825 101 151 4.71E-16 T 13-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily Y11_26571 622cf914b13e78c09118e6b25822c615 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.92 T 13-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 Y11_10351 e4682fc81f914c61e225e1135a65c460 178 Pfam PF01548 Transposase 16 156 7.8E-16 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_00491 374a4290657dcde61e1177dad245f32a 203 Gene3D G3DSA:2.60.460.10 33 200 2.2E-66 T 13-10-2018 IPR038714 YfeY-like superfamily Y11_00491 374a4290657dcde61e1177dad245f32a 203 Pfam PF06572 Protein of unknown function (DUF1131) 30 199 2.9E-81 T 13-10-2018 IPR010938 Protein of unknown function DUF1131 Y11_00491 374a4290657dcde61e1177dad245f32a 203 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 24 199 9.0E-79 T 13-10-2018 IPR010938 Protein of unknown function DUF1131 Y11_34781 f284ee307b8547b96dab4d66ff1140fd 483 PIRSF PIRSF006247 1 483 9.4E-183 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Y11_34781 f284ee307b8547b96dab4d66ff1140fd 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 2.0E-126 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Y11_34781 f284ee307b8547b96dab4d66ff1140fd 483 Pfam PF02386 Cation transport protein 37 477 1.3E-91 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Y11_15311 a7ed3b797ec211bf5f04bda6bde7ab4e 487 PIRSF PIRSF002457 1 487 4.7E-156 T 13-10-2018 IPR030676 Citrate carrier CitT-related Y11_15311 a7ed3b797ec211bf5f04bda6bde7ab4e 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 480 4.1E-162 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Y11_15311 a7ed3b797ec211bf5f04bda6bde7ab4e 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 485 2.6E-172 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Y11_08011 59400d079e80e839f8c95dbe68ab2269 300 SUPERFAMILY SSF88713 14 245 5.4E-26 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Y11_08011 59400d079e80e839f8c95dbe68ab2269 300 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 296 64.71 T 13-10-2018 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 Y11_08011 59400d079e80e839f8c95dbe68ab2269 300 Pfam PF01522 Polysaccharide deacetylase 15 162 1.5E-11 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Y11_21031 f41789b4186f9a4786bd49c68c4e61f3 279 Gene3D G3DSA:3.40.50.2300 46 177 1.6E-37 T 13-10-2018 Y11_21031 f41789b4186f9a4786bd49c68c4e61f3 279 SUPERFAMILY SSF52172 49 176 5.27E-43 T 13-10-2018 IPR011006 CheY-like superfamily Y11_21031 f41789b4186f9a4786bd49c68c4e61f3 279 SMART SM00862 200 275 5.5E-27 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_21031 f41789b4186f9a4786bd49c68c4e61f3 279 Gene3D G3DSA:1.10.10.10 178 279 3.0E-41 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_21031 f41789b4186f9a4786bd49c68c4e61f3 279 Pfam PF00486 Transcriptional regulatory protein, C terminal 201 275 1.6E-27 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Y11_21031 f41789b4186f9a4786bd49c68c4e61f3 279 SUPERFAMILY SSF46894 179 276 1.25E-31 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_21031 f41789b4186f9a4786bd49c68c4e61f3 279 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 51 276 5.2E-114 T 13-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 Y11_21031 f41789b4186f9a4786bd49c68c4e61f3 279 SMART SM00448 53 166 6.1E-44 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_21031 f41789b4186f9a4786bd49c68c4e61f3 279 Pfam PF00072 Response regulator receiver domain 55 167 2.1E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_08101 c36fd2116e4fa28fa1e2a22254d144d1 678 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 33 678 3.2E-143 T 13-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 Y11_08101 c36fd2116e4fa28fa1e2a22254d144d1 678 Pfam PF00593 TonB dependent receptor 198 676 1.8E-35 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Y11_08101 c36fd2116e4fa28fa1e2a22254d144d1 678 Gene3D G3DSA:2.40.170.20 156 678 4.0E-106 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Y11_08101 c36fd2116e4fa28fa1e2a22254d144d1 678 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 150 5.8E-23 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Y11_08101 c36fd2116e4fa28fa1e2a22254d144d1 678 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 33 678 5.7E-112 T 13-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 Y11_08101 c36fd2116e4fa28fa1e2a22254d144d1 678 Gene3D G3DSA:2.170.130.10 33 155 6.1E-35 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Y11_08101 c36fd2116e4fa28fa1e2a22254d144d1 678 SUPERFAMILY SSF56935 33 678 1.65E-89 T 13-10-2018 Y11_40411 f3e5ffff9f445d2e625514174bfa4f85 202 SUPERFAMILY SSF158544 90 144 2.88E-13 T 13-10-2018 IPR038072 GspK, central domain superfamily Y11_40411 f3e5ffff9f445d2e625514174bfa4f85 202 Gene3D G3DSA:1.10.40.60 91 159 2.8E-8 T 13-10-2018 IPR038072 GspK, central domain superfamily Y11_29821 0de03a2c4d941cfcfc789efff13c9c1b 258 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_29821 0de03a2c4d941cfcfc789efff13c9c1b 258 SUPERFAMILY SSF52540 12 245 4.61E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_29821 0de03a2c4d941cfcfc789efff13c9c1b 258 Pfam PF00005 ABC transporter 27 182 2.0E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_29821 0de03a2c4d941cfcfc789efff13c9c1b 258 SMART SM00382 36 238 4.9E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_29821 0de03a2c4d941cfcfc789efff13c9c1b 258 Gene3D G3DSA:3.40.50.300 10 256 8.7E-68 T 13-10-2018 Y11_29821 0de03a2c4d941cfcfc789efff13c9c1b 258 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 12 258 7.3E-121 T 13-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Y11_27091 ceb08078d345ad034f95f34a95a8d2fa 1274 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 1 1270 0.0 T 13-10-2018 IPR011836 Conserved hypothetical protein CHP02099 Y11_27091 ceb08078d345ad034f95f34a95a8d2fa 1274 Pfam PF13502 AsmA-like C-terminal region 1018 1260 2.0E-62 T 13-10-2018 IPR032712 AsmA-like, C-terminal Y11_27091 ceb08078d345ad034f95f34a95a8d2fa 1274 Pfam PF13116 Protein of unknown function 487 767 2.9E-99 T 13-10-2018 IPR025263 Domain of unknown function DUF3971 Y11_17391 3103457fd312e81fda48ac2720b1c903 230 SUPERFAMILY SSF53474 7 224 4.82E-30 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_17391 3103457fd312e81fda48ac2720b1c903 230 Gene3D G3DSA:3.40.50.1820 2 228 1.5E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_17391 3103457fd312e81fda48ac2720b1c903 230 Pfam PF12697 Alpha/beta hydrolase family 7 220 2.6E-17 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_12821 aed156909c1d141f227c0c49e4956ca4 141 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 9 136 6.5E-46 T 13-10-2018 IPR020000 Bacteriophage P2, LysB Y11_31401 c98030b841176bd82add94fb419efe19 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 42.132 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 Y11_31401 c98030b841176bd82add94fb419efe19 280 SUPERFAMILY SSF53335 9 279 8.68E-101 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_31401 c98030b841176bd82add94fb419efe19 280 Gene3D G3DSA:3.40.50.150 1 280 2.2E-120 T 13-10-2018 Y11_31401 c98030b841176bd82add94fb419efe19 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 3.8E-112 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 Y11_31401 c98030b841176bd82add94fb419efe19 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Y11_27181 b15885cbbc3615c64cf986ad442f918b 199 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 5 197 20.927 T 13-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 Y11_27181 b15885cbbc3615c64cf986ad442f918b 199 Pfam PF01794 Ferric reductase like transmembrane component 48 161 4.5E-15 T 13-10-2018 IPR013130 Ferric reductase transmembrane component-like domain Y11_22411 1f91e19a9d2a412915ebbe70e611bde4 276 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 6 275 6.4E-136 T 13-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 Y11_22411 1f91e19a9d2a412915ebbe70e611bde4 276 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 8 275 2.0E-104 T 13-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 Y11_13091 ba9623c7e3c67efebffa789cd98990d9 341 Gene3D G3DSA:1.10.443.10 173 340 2.1E-47 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Y11_13091 ba9623c7e3c67efebffa789cd98990d9 341 SUPERFAMILY SSF56349 64 331 1.18E-45 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Y11_13091 ba9623c7e3c67efebffa789cd98990d9 341 Pfam PF00589 Phage integrase family 178 323 1.4E-20 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Y11_p0271 482e80df8c2d1c0ecb4dcfc556ab7822 141 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 4.0E-39 T 13-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 Y11_p0271 482e80df8c2d1c0ecb4dcfc556ab7822 141 SUPERFAMILY SSF52833 3 132 6.03E-37 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_p0271 482e80df8c2d1c0ecb4dcfc556ab7822 141 Pfam PF03960 ArsC family 7 114 1.4E-18 T 13-10-2018 IPR006660 Arsenate reductase-like Y11_p0271 482e80df8c2d1c0ecb4dcfc556ab7822 141 Gene3D G3DSA:3.40.30.10 1 139 1.0E-56 T 13-10-2018 Y11_07611 7e86d9abbc499f95a20829d537caaa6d 110 Gene3D G3DSA:2.60.120.10 1 110 2.9E-33 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_07611 7e86d9abbc499f95a20829d537caaa6d 110 PIRSF PIRSF029883 3 110 2.9E-29 T 13-10-2018 IPR025499 Pectin degradation protein KdgF Y11_07611 7e86d9abbc499f95a20829d537caaa6d 110 SUPERFAMILY SSF51182 8 109 4.7E-18 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_07611 7e86d9abbc499f95a20829d537caaa6d 110 Pfam PF07883 Cupin domain 35 92 1.2E-9 T 13-10-2018 IPR013096 Cupin 2, conserved barrel Y11_42461 8ab162a488fe4d94dbfeb1cd3e6088da 183 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 68 105 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Y11_42461 8ab162a488fe4d94dbfeb1cd3e6088da 183 Gene3D G3DSA:3.40.140.10 14 177 6.2E-64 T 13-10-2018 Y11_42461 8ab162a488fe4d94dbfeb1cd3e6088da 183 SUPERFAMILY SSF53927 16 168 5.02E-56 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Y11_42461 8ab162a488fe4d94dbfeb1cd3e6088da 183 Pfam PF14437 MafB19-like deaminase 19 162 8.1E-30 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Y11_42461 8ab162a488fe4d94dbfeb1cd3e6088da 183 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 23 164 47.598 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Y11_25361 99037d75764da6fed091321fcd497d7c 62 Pfam PF05489 Phage Tail Protein X 2 52 3.3E-27 T 13-10-2018 IPR008861 Phage Tail Protein X-like Y11_25361 99037d75764da6fed091321fcd497d7c 62 Gene3D G3DSA:3.10.350.10 1 62 1.6E-30 T 13-10-2018 IPR036779 LysM domain superfamily Y11_13291 99037d75764da6fed091321fcd497d7c 62 Pfam PF05489 Phage Tail Protein X 2 52 3.3E-27 T 13-10-2018 IPR008861 Phage Tail Protein X-like Y11_13291 99037d75764da6fed091321fcd497d7c 62 Gene3D G3DSA:3.10.350.10 1 62 1.6E-30 T 13-10-2018 IPR036779 LysM domain superfamily Y11_26621 b8b7c5e579fedf49d5fe7642c1e8b62a 273 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 5.0E-22 T 13-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal Y11_26621 b8b7c5e579fedf49d5fe7642c1e8b62a 273 Gene3D G3DSA:3.10.620.30 68 251 1.0E-45 T 13-10-2018 Y11_26621 b8b7c5e579fedf49d5fe7642c1e8b62a 273 Pfam PF01841 Transglutaminase-like superfamily 124 217 1.4E-22 T 13-10-2018 IPR002931 Transglutaminase-like Y11_26621 b8b7c5e579fedf49d5fe7642c1e8b62a 273 SUPERFAMILY SSF54001 50 257 1.31E-41 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Y11_26621 b8b7c5e579fedf49d5fe7642c1e8b62a 273 SMART SM00460 158 220 8.2E-19 T 13-10-2018 IPR002931 Transglutaminase-like Y11_23441 e4e24ecc72bbff8e5259278b549db8b8 252 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 62 251 6.3E-71 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Y11_23441 e4e24ecc72bbff8e5259278b549db8b8 252 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 37 251 31.17 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Y11_23441 e4e24ecc72bbff8e5259278b549db8b8 252 Gene3D G3DSA:3.40.50.150 43 252 4.8E-72 T 13-10-2018 Y11_23441 e4e24ecc72bbff8e5259278b549db8b8 252 SUPERFAMILY SSF53335 30 250 2.89E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_23441 e4e24ecc72bbff8e5259278b549db8b8 252 Pfam PF02390 Putative methyltransferase 77 246 2.3E-60 T 13-10-2018 Y11_02611 1b293043f5bd6a7108647981de925edd 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 13-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_02611 1b293043f5bd6a7108647981de925edd 376 Pfam PF00268 Ribonucleotide reductase, small chain 33 332 4.1E-46 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Y11_02611 1b293043f5bd6a7108647981de925edd 376 Gene3D G3DSA:1.10.620.20 2 340 1.5E-148 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Y11_02611 1b293043f5bd6a7108647981de925edd 376 SUPERFAMILY SSF47240 3 340 3.75E-113 T 13-10-2018 IPR009078 Ferritin-like superfamily Y11_09371 3d7f9dbe891da90a5861ac8f4590d8ce 452 SUPERFAMILY SSF103473 23 436 9.02E-61 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_09371 3d7f9dbe891da90a5861ac8f4590d8ce 452 Gene3D G3DSA:1.20.1250.20 21 223 3.6E-40 T 13-10-2018 Y11_09371 3d7f9dbe891da90a5861ac8f4590d8ce 452 PIRSF PIRSF002808 10 451 8.3E-100 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 Y11_09371 3d7f9dbe891da90a5861ac8f4590d8ce 452 Pfam PF07690 Major Facilitator Superfamily 36 391 8.0E-36 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_09371 3d7f9dbe891da90a5861ac8f4590d8ce 452 Gene3D G3DSA:1.20.1250.20 241 444 4.2E-30 T 13-10-2018 Y11_38611 0ec7dcaa82f907de5ca53e9b436b7c0b 331 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 329 36.394 T 13-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 Y11_38611 0ec7dcaa82f907de5ca53e9b436b7c0b 331 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 322 2.4E-107 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Y11_38611 0ec7dcaa82f907de5ca53e9b436b7c0b 331 Gene3D G3DSA:3.40.718.10 1 331 2.9E-134 T 13-10-2018 Y11_38611 0ec7dcaa82f907de5ca53e9b436b7c0b 331 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 325 1.8E-129 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Y11_38611 0ec7dcaa82f907de5ca53e9b436b7c0b 331 SUPERFAMILY SSF53659 7 328 4.8E-115 T 13-10-2018 Y11_21401 97e6223d216c634293b428e5a0770fbb 331 Gene3D G3DSA:3.10.520.20 13 331 1.2E-112 T 13-10-2018 Y11_21401 97e6223d216c634293b428e5a0770fbb 331 PIRSF PIRSF006268 9 329 1.3E-90 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Y11_21401 97e6223d216c634293b428e5a0770fbb 331 SUPERFAMILY SSF143631 17 327 2.28E-101 T 13-10-2018 IPR003374 ApbE-like superfamily Y11_21401 97e6223d216c634293b428e5a0770fbb 331 Pfam PF02424 ApbE family 24 300 1.0E-84 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Y11_35881 94d335126c7735af822a03ef3f518d20 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 13-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 Y11_35881 94d335126c7735af822a03ef3f518d20 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 5.2E-29 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Y11_35881 94d335126c7735af822a03ef3f518d20 97 PRINTS PR00297 10kDa chaperonin signature 25 46 2.1E-27 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Y11_35881 94d335126c7735af822a03ef3f518d20 97 PRINTS PR00297 10kDa chaperonin signature 3 18 2.1E-27 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Y11_35881 94d335126c7735af822a03ef3f518d20 97 PRINTS PR00297 10kDa chaperonin signature 60 72 2.1E-27 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Y11_35881 94d335126c7735af822a03ef3f518d20 97 PRINTS PR00297 10kDa chaperonin signature 82 95 2.1E-27 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Y11_35881 94d335126c7735af822a03ef3f518d20 97 SUPERFAMILY SSF50129 1 96 5.56E-31 T 13-10-2018 IPR011032 GroES-like superfamily Y11_35881 94d335126c7735af822a03ef3f518d20 97 Gene3D G3DSA:2.30.33.40 1 97 1.2E-36 T 13-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Y11_35881 94d335126c7735af822a03ef3f518d20 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.817 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Y11_35881 94d335126c7735af822a03ef3f518d20 97 SMART SM00883 2 95 5.7E-49 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Y11_20121 740320a392bcc445c33978b6f0b2cec1 121 Pfam PF02635 DsrE/DsrF-like family 8 121 1.1E-19 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Y11_20121 740320a392bcc445c33978b6f0b2cec1 121 SUPERFAMILY SSF75169 7 121 1.31E-30 T 13-10-2018 IPR027396 DsrEFH-like Y11_20121 740320a392bcc445c33978b6f0b2cec1 121 Gene3D G3DSA:3.40.1260.10 6 121 3.5E-30 T 13-10-2018 IPR027396 DsrEFH-like Y11_41721 96fcc371f5928d84a21280d4e0c4e639 145 Pfam PF00581 Rhodanese-like domain 36 122 2.7E-9 T 13-10-2018 IPR001763 Rhodanese-like domain Y11_41721 96fcc371f5928d84a21280d4e0c4e639 145 SMART SM00450 30 127 3.6E-8 T 13-10-2018 IPR001763 Rhodanese-like domain Y11_41721 96fcc371f5928d84a21280d4e0c4e639 145 ProSitePatterns PS00380 Rhodanese signature 1. 55 66 - T 13-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Y11_41721 96fcc371f5928d84a21280d4e0c4e639 145 SUPERFAMILY SSF52821 24 131 3.67E-23 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Y11_41721 96fcc371f5928d84a21280d4e0c4e639 145 Gene3D G3DSA:3.40.250.10 11 129 2.3E-25 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Y11_40871 5d32ba5bde6635d681daed6f72e94576 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 4.9E-24 T 13-10-2018 IPR006696 Protein of unknown function DUF423 Y11_07321 4c6ed8038015b1a6b60705bef461b949 178 SMART SM00972 116 175 6.4E-20 T 13-10-2018 IPR007893 Spore coat protein U Y11_07321 4c6ed8038015b1a6b60705bef461b949 178 Pfam PF05229 Spore Coat Protein U domain 28 175 1.4E-31 T 13-10-2018 IPR007893 Spore coat protein U Y11_31161 a0e1f4638f10895a28905a64d2f01a92 62 Pfam PF11120 Cellulose biosynthesis protein BcsF 1 59 3.4E-31 T 13-10-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT Y11_31161 a0e1f4638f10895a28905a64d2f01a92 62 TIGRFAM TIGR03493 cellullose_BcsF: celllulose biosynthesis operon protein BcsF/YhjT 1 62 3.3E-19 T 13-10-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT Y11_31161 a0e1f4638f10895a28905a64d2f01a92 62 ProDom PD053231 YHJT MEMBRANE INNER BCSF 1 62 1.0E-7 T 13-10-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT Y11_29571 f42824be6a2b4de77255e1d6566b5977 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.878 T 13-10-2018 IPR023064 D-ribose pyranase GO:0016872 Y11_29571 f42824be6a2b4de77255e1d6566b5977 139 Gene3D G3DSA:3.40.1650.10 8 136 2.6E-38 T 13-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Y11_29571 f42824be6a2b4de77255e1d6566b5977 139 SUPERFAMILY SSF102546 1 139 3.79E-45 T 13-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Y11_29571 f42824be6a2b4de77255e1d6566b5977 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 6.0E-50 T 13-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Y11_32621 bfaa5bd504dd705e0c5fece145c3d927 260 PIRSF PIRSF016184 1 260 2.7E-52 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Y11_32621 bfaa5bd504dd705e0c5fece145c3d927 260 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 235 7.9E-30 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Y11_32621 bfaa5bd504dd705e0c5fece145c3d927 260 Gene3D G3DSA:3.10.310.10 120 248 7.2E-87 T 13-10-2018 Y11_32621 bfaa5bd504dd705e0c5fece145c3d927 260 SUPERFAMILY SSF54506 1 259 1.41E-69 T 13-10-2018 Y11_32621 bfaa5bd504dd705e0c5fece145c3d927 260 Gene3D G3DSA:3.10.310.10 5 252 7.2E-87 T 13-10-2018 Y11_32621 bfaa5bd504dd705e0c5fece145c3d927 260 Pfam PF02567 Phenazine biosynthesis-like protein 8 240 5.9E-48 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Y11_12301 edffdf644328938270ec6a51ee9f0dfc 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 7.5E-101 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Y11_12301 edffdf644328938270ec6a51ee9f0dfc 335 PIRSF PIRSF000267 2 335 4.1E-91 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Y11_12301 edffdf644328938270ec6a51ee9f0dfc 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 213 6.6E-44 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Y11_29781 7c0566eb64a45cc3cb42c5bda1e3c448 609 Pfam PF01380 SIS domain 462 591 3.1E-28 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_29781 7c0566eb64a45cc3cb42c5bda1e3c448 609 Pfam PF01380 SIS domain 289 417 1.3E-33 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_29781 7c0566eb64a45cc3cb42c5bda1e3c448 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 41.079 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Y11_29781 7c0566eb64a45cc3cb42c5bda1e3c448 609 SUPERFAMILY SSF53697 245 609 4.07E-113 T 13-10-2018 Y11_29781 7c0566eb64a45cc3cb42c5bda1e3c448 609 Pfam PF13522 Glutamine amidotransferase domain 62 184 4.0E-21 T 13-10-2018 Y11_29781 7c0566eb64a45cc3cb42c5bda1e3c448 609 Gene3D G3DSA:3.40.50.10490 447 594 2.2E-153 T 13-10-2018 Y11_29781 7c0566eb64a45cc3cb42c5bda1e3c448 609 Gene3D G3DSA:3.60.20.10 2 241 1.2E-82 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_29781 7c0566eb64a45cc3cb42c5bda1e3c448 609 Gene3D G3DSA:3.40.50.10490 249 608 2.2E-153 T 13-10-2018 Y11_29781 7c0566eb64a45cc3cb42c5bda1e3c448 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.6E-263 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Y11_29781 7c0566eb64a45cc3cb42c5bda1e3c448 609 SUPERFAMILY SSF56235 2 233 1.46E-74 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_24831 b6266ac80eca1ac2ddbf006c9620c0e3 101 Gene3D G3DSA:3.30.70.100 1 101 3.8E-27 T 13-10-2018 Y11_24831 b6266ac80eca1ac2ddbf006c9620c0e3 101 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 84 7.5E-17 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Y11_24831 b6266ac80eca1ac2ddbf006c9620c0e3 101 SUPERFAMILY SSF54909 1 97 9.91E-29 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Y11_15181 e9d18b89be9e2af9d541881f2729489b 414 SUPERFAMILY SSF49401 236 411 1.29E-7 T 13-10-2018 IPR008966 Adhesion domain superfamily Y11_15181 e9d18b89be9e2af9d541881f2729489b 414 PIRSF PIRSF029766 2 414 1.9E-161 T 13-10-2018 IPR011228 Uncharacterised conserved protein UCP029766 Y11_15181 e9d18b89be9e2af9d541881f2729489b 414 Pfam PF00419 Fimbrial protein 231 414 1.4E-35 T 13-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 Y11_09851 2468585922a1f12c60dc8a7b2464c6b9 222 SUPERFAMILY SSF52540 1 207 2.44E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_09851 2468585922a1f12c60dc8a7b2464c6b9 222 Pfam PF13500 AAA domain 4 207 2.5E-29 T 13-10-2018 Y11_09851 2468585922a1f12c60dc8a7b2464c6b9 222 Gene3D G3DSA:3.40.50.300 3 220 8.0E-53 T 13-10-2018 Y11_09851 2468585922a1f12c60dc8a7b2464c6b9 222 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 207 24.381 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Y11_09851 2468585922a1f12c60dc8a7b2464c6b9 222 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 1.8E-44 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Y11_09851 2468585922a1f12c60dc8a7b2464c6b9 222 PIRSF PIRSF006755 1 221 1.7E-67 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Y11_03471 7b3af41d327cd635e9ef90dde9b58e9b 275 Pfam PF03180 NLPA lipoprotein 33 270 6.1E-75 T 13-10-2018 IPR004872 Lipoprotein NlpA family Y11_03471 7b3af41d327cd635e9ef90dde9b58e9b 275 Gene3D G3DSA:3.40.190.10 112 220 2.2E-86 T 13-10-2018 Y11_03471 7b3af41d327cd635e9ef90dde9b58e9b 275 SUPERFAMILY SSF53850 33 271 2.79E-65 T 13-10-2018 Y11_03471 7b3af41d327cd635e9ef90dde9b58e9b 275 Gene3D G3DSA:3.40.190.10 33 268 2.2E-86 T 13-10-2018 Y11_03471 7b3af41d327cd635e9ef90dde9b58e9b 275 PIRSF PIRSF002854 1 272 1.2E-95 T 13-10-2018 IPR004872 Lipoprotein NlpA family Y11_11061 eebb5624f0b7c5327fa8dd0f5c66e4a7 159 Gene3D G3DSA:3.60.40.10 5 141 7.1E-9 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Y11_42401 d0cda576a9123e788a5a20fdc7f5e81f 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 92 5.0E-41 T 13-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Y11_42401 d0cda576a9123e788a5a20fdc7f5e81f 126 SUPERFAMILY SSF56214 3 125 2.49E-30 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Y11_42401 d0cda576a9123e788a5a20fdc7f5e81f 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 3.1E-52 T 13-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Y11_42401 d0cda576a9123e788a5a20fdc7f5e81f 126 Gene3D G3DSA:3.90.470.20 1 126 2.4E-39 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Y11_42401 d0cda576a9123e788a5a20fdc7f5e81f 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 4.7E-25 T 13-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Y11_42401 d0cda576a9123e788a5a20fdc7f5e81f 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.251 T 13-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Y11_42401 d0cda576a9123e788a5a20fdc7f5e81f 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 2.1E-37 T 13-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Y11_04891 0ec4c4b4607e4e850e8ff2ec38421214 214 PRINTS PR01549 Autoinducer synthesis protein signature 163 180 6.7E-61 T 13-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Y11_04891 0ec4c4b4607e4e850e8ff2ec38421214 214 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 6.7E-61 T 13-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Y11_04891 0ec4c4b4607e4e850e8ff2ec38421214 214 PRINTS PR01549 Autoinducer synthesis protein signature 119 140 6.7E-61 T 13-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Y11_04891 0ec4c4b4607e4e850e8ff2ec38421214 214 PRINTS PR01549 Autoinducer synthesis protein signature 39 61 6.7E-61 T 13-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Y11_04891 0ec4c4b4607e4e850e8ff2ec38421214 214 PRINTS PR01549 Autoinducer synthesis protein signature 141 162 6.7E-61 T 13-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Y11_04891 0ec4c4b4607e4e850e8ff2ec38421214 214 PRINTS PR01549 Autoinducer synthesis protein signature 62 80 6.7E-61 T 13-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Y11_04891 0ec4c4b4607e4e850e8ff2ec38421214 214 PRINTS PR01549 Autoinducer synthesis protein signature 94 106 6.7E-61 T 13-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Y11_04891 0ec4c4b4607e4e850e8ff2ec38421214 214 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 48 - T 13-10-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Y11_04891 0ec4c4b4607e4e850e8ff2ec38421214 214 Gene3D G3DSA:3.40.630.30 1 211 9.2E-50 T 13-10-2018 Y11_04891 0ec4c4b4607e4e850e8ff2ec38421214 214 SUPERFAMILY SSF55729 1 210 1.17E-39 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_04891 0ec4c4b4607e4e850e8ff2ec38421214 214 Pfam PF00765 Autoinducer synthase 8 188 1.8E-85 T 13-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Y11_41501 bb166b29ebd67f6ecaf695eb825da34f 260 Pfam PF00929 Exonuclease 9 175 1.1E-40 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Y11_41501 bb166b29ebd67f6ecaf695eb825da34f 260 Gene3D G3DSA:3.20.20.140 208 260 9.9E-8 T 13-10-2018 Y11_41501 bb166b29ebd67f6ecaf695eb825da34f 260 SUPERFAMILY SSF53098 4 185 2.03E-55 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_41501 bb166b29ebd67f6ecaf695eb825da34f 260 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 1.2E-92 T 13-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_41501 bb166b29ebd67f6ecaf695eb825da34f 260 Gene3D G3DSA:3.30.420.10 2 190 1.2E-60 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_41501 bb166b29ebd67f6ecaf695eb825da34f 260 SMART SM00479 7 184 1.9E-51 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Y11_41501 bb166b29ebd67f6ecaf695eb825da34f 260 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 6.1E-89 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_04821 2f241dbef8f301bc2b89467543911391 223 Gene3D G3DSA:3.30.70.20 98 151 1.5E-55 T 13-10-2018 Y11_04821 2f241dbef8f301bc2b89467543911391 223 Pfam PF13247 4Fe-4S dicluster domain 84 181 2.6E-24 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_04821 2f241dbef8f301bc2b89467543911391 223 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 125 136 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y11_04821 2f241dbef8f301bc2b89467543911391 223 SUPERFAMILY SSF54862 36 215 1.03E-57 T 13-10-2018 Y11_04821 2f241dbef8f301bc2b89467543911391 223 Gene3D G3DSA:3.30.70.20 37 212 1.5E-55 T 13-10-2018 Y11_04821 2f241dbef8f301bc2b89467543911391 223 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 4 221 3.4E-118 T 13-10-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein Y11_04821 2f241dbef8f301bc2b89467543911391 223 Pfam PF12800 4Fe-4S binding domain 45 56 0.089 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y11_21341 1501774155da7298e69474111742cfeb 130 SUPERFAMILY SSF55298 6 129 3.14E-35 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Y11_21341 1501774155da7298e69474111742cfeb 130 Gene3D G3DSA:3.30.1330.40 3 128 1.2E-32 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Y11_21341 1501774155da7298e69474111742cfeb 130 Pfam PF01042 Endoribonuclease L-PSP 15 127 1.1E-27 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Y11_06961 2cc6263cfdad7496ea96411218e4364e 256 Pfam PF06276 Ferric iron reductase FhuF-like transporter 84 227 6.3E-26 T 13-10-2018 IPR022770 Ferric iron reductase FhuF domain Y11_06961 2cc6263cfdad7496ea96411218e4364e 256 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 78 253 8.7E-63 T 13-10-2018 IPR008090 Ferric iron reductase Y11_06961 2cc6263cfdad7496ea96411218e4364e 256 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 232 252 9.2E-8 T 13-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 Y11_06961 2cc6263cfdad7496ea96411218e4364e 256 PRINTS PR01714 Ferric iron reductase signature 84 99 6.2E-31 T 13-10-2018 IPR008090 Ferric iron reductase Y11_06961 2cc6263cfdad7496ea96411218e4364e 256 PRINTS PR01714 Ferric iron reductase signature 116 130 6.2E-31 T 13-10-2018 IPR008090 Ferric iron reductase Y11_06961 2cc6263cfdad7496ea96411218e4364e 256 PRINTS PR01714 Ferric iron reductase signature 48 65 6.2E-31 T 13-10-2018 IPR008090 Ferric iron reductase Y11_06961 2cc6263cfdad7496ea96411218e4364e 256 PRINTS PR01714 Ferric iron reductase signature 163 179 6.2E-31 T 13-10-2018 IPR008090 Ferric iron reductase Y11_06961 2cc6263cfdad7496ea96411218e4364e 256 PRINTS PR01714 Ferric iron reductase signature 232 250 6.2E-31 T 13-10-2018 IPR008090 Ferric iron reductase Y11_06961 2cc6263cfdad7496ea96411218e4364e 256 PRINTS PR01714 Ferric iron reductase signature 206 222 6.2E-31 T 13-10-2018 IPR008090 Ferric iron reductase Y11_07371 fa2a969bf4051311b6edc6fd0379c760 165 SMART SM00065 9 161 0.0041 T 13-10-2018 IPR003018 GAF domain GO:0005515 Y11_07371 fa2a969bf4051311b6edc6fd0379c760 165 Gene3D G3DSA:3.30.450.40 1 165 2.0E-66 T 13-10-2018 IPR029016 GAF-like domain superfamily Y11_07371 fa2a969bf4051311b6edc6fd0379c760 165 SUPERFAMILY SSF55781 2 151 2.03E-41 T 13-10-2018 Y11_07371 fa2a969bf4051311b6edc6fd0379c760 165 Pfam PF13185 GAF domain 39 147 4.5E-10 T 13-10-2018 IPR003018 GAF domain GO:0005515 Y11_14961 b889227c1dece95d4f084f0cf455f7e8 213 Pfam PF06551 Protein of unknown function (DUF1120) 29 102 4.2E-9 T 13-10-2018 IPR010546 Protein of unknown function DUF1120 Y11_03561 d7b2796c3b8ab273a52a9c4cee194e9d 254 Pfam PF08220 DeoR-like helix-turn-helix domain 8 57 1.6E-10 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_03561 d7b2796c3b8ab273a52a9c4cee194e9d 254 SMART SM01134 75 236 3.2E-56 T 13-10-2018 Y11_03561 d7b2796c3b8ab273a52a9c4cee194e9d 254 SMART SM00420 8 57 2.3E-8 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Y11_03561 d7b2796c3b8ab273a52a9c4cee194e9d 254 Pfam PF00455 DeoR C terminal sensor domain 77 234 1.4E-44 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain Y11_03561 d7b2796c3b8ab273a52a9c4cee194e9d 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Y11_03561 d7b2796c3b8ab273a52a9c4cee194e9d 254 SUPERFAMILY SSF100950 76 238 6.28E-24 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_38711 cb5465c049b10935118aa3fd907f0257 535 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 1.9E-240 T 13-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 Y11_38711 cb5465c049b10935118aa3fd907f0257 535 SUPERFAMILY SSF161098 11 264 9.27E-44 T 13-10-2018 IPR035906 MetI-like superfamily Y11_38711 cb5465c049b10935118aa3fd907f0257 535 SUPERFAMILY SSF161098 286 527 5.63E-30 T 13-10-2018 IPR035906 MetI-like superfamily Y11_38711 cb5465c049b10935118aa3fd907f0257 535 Gene3D G3DSA:1.10.3720.10 289 534 1.0E-24 T 13-10-2018 IPR035906 MetI-like superfamily Y11_38711 cb5465c049b10935118aa3fd907f0257 535 Gene3D G3DSA:1.10.3720.10 9 268 5.0E-44 T 13-10-2018 IPR035906 MetI-like superfamily Y11_38711 cb5465c049b10935118aa3fd907f0257 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 254 8.9E-11 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_38711 cb5465c049b10935118aa3fd907f0257 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 370 523 2.4E-7 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_03581 dab0fd241313f10715e23116c666da38 202 SUPERFAMILY SSF48317 2 172 8.63E-37 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Y11_03581 dab0fd241313f10715e23116c666da38 202 Pfam PF01569 PAP2 superfamily 66 169 4.8E-14 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Y11_03581 dab0fd241313f10715e23116c666da38 202 Gene3D G3DSA:1.20.144.10 94 185 1.3E-18 T 13-10-2018 Y11_03581 dab0fd241313f10715e23116c666da38 202 SMART SM00014 60 169 1.5E-22 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Y11_02001 7718ffbc62dcfa3d5a08889ffca1bb81 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 85 5.7E-12 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Y11_02001 7718ffbc62dcfa3d5a08889ffca1bb81 95 SUPERFAMILY SSF52794 1 86 4.71E-20 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Y11_02001 7718ffbc62dcfa3d5a08889ffca1bb81 95 Gene3D G3DSA:3.40.50.2300 1 90 1.5E-19 T 13-10-2018 Y11_27131 9592ea5fd3b18b3629e83403156ebf0c 328 PIRSF PIRSF038471 2 284 2.7E-75 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Y11_27131 9592ea5fd3b18b3629e83403156ebf0c 328 Gene3D G3DSA:2.40.10.350 180 257 6.0E-35 T 13-10-2018 Y11_27131 9592ea5fd3b18b3629e83403156ebf0c 328 Pfam PF04085 rod shape-determining protein MreC 123 269 1.4E-37 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Y11_27131 9592ea5fd3b18b3629e83403156ebf0c 328 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 277 1.5E-115 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Y11_27131 9592ea5fd3b18b3629e83403156ebf0c 328 Gene3D G3DSA:2.40.10.340 122 266 6.0E-35 T 13-10-2018 Y11_22401 d60c32f4ee04057ed0fb223a9cec9c20 265 Pfam PF03609 PTS system sorbose-specific iic component 5 237 3.8E-73 T 13-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 Y11_22401 d60c32f4ee04057ed0fb223a9cec9c20 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 265 4.5E-121 T 13-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 Y11_19741 f8d45910fca49b3e5da9e43fc80bb240 228 SMART SM00382 35 223 1.2E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_19741 f8d45910fca49b3e5da9e43fc80bb240 228 SUPERFAMILY SSF52540 6 227 2.21E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_19741 f8d45910fca49b3e5da9e43fc80bb240 228 Pfam PF00005 ABC transporter 27 174 3.7E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_19741 f8d45910fca49b3e5da9e43fc80bb240 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_19741 f8d45910fca49b3e5da9e43fc80bb240 228 Gene3D G3DSA:3.40.50.300 4 228 4.7E-63 T 13-10-2018 Y11_41771 b79bd782ce077fe1eca4b6998b823902 268 Gene3D G3DSA:1.10.3720.10 60 263 2.1E-19 T 13-10-2018 IPR035906 MetI-like superfamily Y11_41771 b79bd782ce077fe1eca4b6998b823902 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 262 1.7E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_41771 b79bd782ce077fe1eca4b6998b823902 268 SUPERFAMILY SSF161098 65 256 6.8E-24 T 13-10-2018 IPR035906 MetI-like superfamily Y11_19381 23a05718121de737a1d777bba55d712b 214 Gene3D G3DSA:3.60.21.10 1 214 1.9E-59 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Y11_19381 23a05718121de737a1d777bba55d712b 214 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 70 75 - T 13-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Y11_19381 23a05718121de737a1d777bba55d712b 214 SUPERFAMILY SSF56300 2 213 9.85E-48 T 13-10-2018 Y11_19381 23a05718121de737a1d777bba55d712b 214 Pfam PF00149 Calcineurin-like phosphoesterase 12 187 2.2E-13 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Y11_25891 34b3b2293c1b2ba35104e4728a82cbae 230 Pfam PF09335 SNARE associated Golgi protein 48 172 8.3E-20 T 13-10-2018 IPR032816 SNARE associated Golgi protein Y11_39111 2540f9491994986614376f840fb2c7ef 306 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 8.6E-109 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Y11_39111 2540f9491994986614376f840fb2c7ef 306 SUPERFAMILY SSF54211 134 278 1.44E-54 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_39111 2540f9491994986614376f840fb2c7ef 306 Gene3D G3DSA:3.30.230.20 1 128 5.3E-52 T 13-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Y11_39111 2540f9491994986614376f840fb2c7ef 306 SUPERFAMILY SSF54211 3 124 1.06E-41 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Y11_39111 2540f9491994986614376f840fb2c7ef 306 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.115 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Y11_39111 2540f9491994986614376f840fb2c7ef 306 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 2.8E-159 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Y11_39111 2540f9491994986614376f840fb2c7ef 306 Gene3D G3DSA:3.30.1700.10 129 306 3.8E-76 T 13-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Y11_11901 d2791fc56a88d6b02614eda00faa7d0c 191 SUPERFAMILY SSF52499 3 189 2.49E-48 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Y11_11901 d2791fc56a88d6b02614eda00faa7d0c 191 Pfam PF00857 Isochorismatase family 8 181 7.7E-39 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 Y11_11901 d2791fc56a88d6b02614eda00faa7d0c 191 Gene3D G3DSA:3.40.50.850 1 189 2.6E-53 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Y11_38271 1cc251fd406a805d274e0079a9475c57 155 Pfam PF05981 CreA protein 24 155 1.7E-58 T 13-10-2018 IPR010292 Uncharacterised protein family CreA Y11_38271 1cc251fd406a805d274e0079a9475c57 155 PIRSF PIRSF003174 1 155 2.3E-67 T 13-10-2018 IPR010292 Uncharacterised protein family CreA Y11_37571 fe3978afc70807b70236da2e431758d2 96 Gene3D G3DSA:3.30.70.100 1 96 6.2E-37 T 13-10-2018 Y11_37571 fe3978afc70807b70236da2e431758d2 96 Hamap MF_02051 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [lsrG]. 1 96 36.822 T 13-10-2018 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase GO:0016853 Y11_37571 fe3978afc70807b70236da2e431758d2 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 4.5E-18 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Y11_37571 fe3978afc70807b70236da2e431758d2 96 SUPERFAMILY SSF54909 1 91 1.42E-24 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Y11_03251 a5ceaf58e1cf153d342ea434eca2a88e 312 PIRSF PIRSF000535 2 311 6.3E-115 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Y11_03251 a5ceaf58e1cf153d342ea434eca2a88e 312 Gene3D G3DSA:3.40.1190.20 2 310 1.6E-90 T 13-10-2018 IPR029056 Ribokinase-like Y11_03251 a5ceaf58e1cf153d342ea434eca2a88e 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Y11_03251 a5ceaf58e1cf153d342ea434eca2a88e 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 2.2E-62 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Y11_03251 a5ceaf58e1cf153d342ea434eca2a88e 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 4.7E-98 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Y11_03251 a5ceaf58e1cf153d342ea434eca2a88e 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Y11_03251 a5ceaf58e1cf153d342ea434eca2a88e 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 1.1E-99 T 13-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 Y11_03251 a5ceaf58e1cf153d342ea434eca2a88e 312 SUPERFAMILY SSF53613 7 306 4.52E-66 T 13-10-2018 IPR029056 Ribokinase-like Y11_30731 4a6baeb5447d1dfda81d032794e6c85c 446 Gene3D G3DSA:1.20.1740.10 1 444 8.7E-65 T 13-10-2018 Y11_30731 4a6baeb5447d1dfda81d032794e6c85c 446 Pfam PF00324 Amino acid permease 1 433 1.8E-109 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Y11_30731 4a6baeb5447d1dfda81d032794e6c85c 446 ProSitePatterns PS00218 Amino acid permeases signature. 22 52 - T 13-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 Y11_30731 4a6baeb5447d1dfda81d032794e6c85c 446 PIRSF PIRSF006060 1 446 2.0E-70 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_16021 463788bc8d01d65d4697181acb0e63cf 275 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 9 256 5.7E-50 T 13-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 Y11_16021 463788bc8d01d65d4697181acb0e63cf 275 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 8 256 2.5E-72 T 13-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 Y11_35861 25c454e573dcc8728b6ac6d025271328 478 Gene3D G3DSA:1.10.275.10 6 142 6.8E-59 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal Y11_35861 25c454e573dcc8728b6ac6d025271328 478 SUPERFAMILY SSF48557 2 458 3.68E-142 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 Y11_35861 25c454e573dcc8728b6ac6d025271328 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 3.9E-5 T 13-10-2018 Y11_35861 25c454e573dcc8728b6ac6d025271328 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 3.9E-5 T 13-10-2018 Y11_35861 25c454e573dcc8728b6ac6d025271328 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 3.9E-5 T 13-10-2018 Y11_35861 25c454e573dcc8728b6ac6d025271328 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 3.1E-27 T 13-10-2018 IPR000362 Fumarate lyase family Y11_35861 25c454e573dcc8728b6ac6d025271328 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 3.1E-27 T 13-10-2018 IPR000362 Fumarate lyase family Y11_35861 25c454e573dcc8728b6ac6d025271328 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 3.1E-27 T 13-10-2018 IPR000362 Fumarate lyase family Y11_35861 25c454e573dcc8728b6ac6d025271328 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 3.1E-27 T 13-10-2018 IPR000362 Fumarate lyase family Y11_35861 25c454e573dcc8728b6ac6d025271328 478 Pfam PF00206 Lyase 13 345 3.9E-108 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal Y11_35861 25c454e573dcc8728b6ac6d025271328 478 Gene3D G3DSA:1.20.200.10 143 410 2.6E-114 T 13-10-2018 Y11_35861 25c454e573dcc8728b6ac6d025271328 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Y11_35861 25c454e573dcc8728b6ac6d025271328 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 1.7E-264 T 13-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 Y11_35861 25c454e573dcc8728b6ac6d025271328 478 Gene3D G3DSA:1.10.40.30 411 460 2.4E-29 T 13-10-2018 Y11_35861 25c454e573dcc8728b6ac6d025271328 478 Pfam PF10415 Fumarase C C-terminus 411 464 4.1E-17 T 13-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Y11_03591 dfc18791cb6f95b69a59503da364dbcb 210 SUPERFAMILY SSF48317 9 199 9.29E-12 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Y11_03591 dfc18791cb6f95b69a59503da364dbcb 210 Gene3D G3DSA:1.20.144.10 117 210 5.9E-8 T 13-10-2018 Y11_03591 dfc18791cb6f95b69a59503da364dbcb 210 Pfam PF01569 PAP2 superfamily 79 199 7.0E-8 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Y11_08371 7b37fbf1591e59d9b2bf390ebc87702f 202 Gene3D G3DSA:1.10.357.10 2 200 3.5E-60 T 13-10-2018 Y11_08371 7b37fbf1591e59d9b2bf390ebc87702f 202 Pfam PF16925 Bacterial transcriptional repressor C-terminal 87 187 3.4E-11 T 13-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Y11_08371 7b37fbf1591e59d9b2bf390ebc87702f 202 SUPERFAMILY SSF46689 2 76 2.98E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_08371 7b37fbf1591e59d9b2bf390ebc87702f 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 56 2.6E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Y11_08371 7b37fbf1591e59d9b2bf390ebc87702f 202 SUPERFAMILY SSF48498 85 196 1.05E-23 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Y11_14271 c8c6b390bbb6e1a9cdd54a960337fcdc 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 252 320 1.4E-15 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) Y11_14271 c8c6b390bbb6e1a9cdd54a960337fcdc 334 PIRSF PIRSF002888 2 330 4.9E-97 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Y11_14271 c8c6b390bbb6e1a9cdd54a960337fcdc 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 320 1.7E-111 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Y11_14271 c8c6b390bbb6e1a9cdd54a960337fcdc 334 SUPERFAMILY SSF103039 48 230 7.59E-20 T 13-10-2018 IPR028976 CheC-like superfamily Y11_14271 c8c6b390bbb6e1a9cdd54a960337fcdc 334 SUPERFAMILY SSF101801 249 322 1.83E-12 T 13-10-2018 IPR036429 SpoA-like superfamily Y11_14271 c8c6b390bbb6e1a9cdd54a960337fcdc 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 1.4E-30 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Y11_14271 c8c6b390bbb6e1a9cdd54a960337fcdc 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 1.4E-30 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Y11_14271 c8c6b390bbb6e1a9cdd54a960337fcdc 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 1.4E-30 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Y11_14271 c8c6b390bbb6e1a9cdd54a960337fcdc 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 1.4E-30 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Y11_14271 c8c6b390bbb6e1a9cdd54a960337fcdc 334 Gene3D G3DSA:3.40.1550.10 43 232 2.7E-56 T 13-10-2018 IPR028976 CheC-like superfamily Y11_14271 c8c6b390bbb6e1a9cdd54a960337fcdc 334 Pfam PF02154 Flagellar motor switch protein FliM 37 230 3.2E-75 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Y11_27001 bbbb3edd3db8f0988cc027e9f8e0e793 103 Pfam PF16083 LydA holin phage, holin superfamily III 15 92 7.5E-25 T 13-10-2018 IPR032126 LydA-like holin Y11_12851 070ef514f6ccef829a554ccdbdf41110 353 Pfam PF13676 TIR domain 139 240 5.0E-19 T 13-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 Y11_12851 070ef514f6ccef829a554ccdbdf41110 353 SUPERFAMILY SSF52200 136 236 3.92E-14 T 13-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily Y11_12851 070ef514f6ccef829a554ccdbdf41110 353 Gene3D G3DSA:3.40.50.10140 131 261 5.1E-16 T 13-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily Y11_34531 09ab24d875d407c8dcec93bb9d165d38 284 Gene3D G3DSA:3.40.50.1820 33 272 4.3E-73 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_34531 09ab24d875d407c8dcec93bb9d165d38 284 Pfam PF01738 Dienelactone hydrolase family 50 272 2.4E-71 T 13-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Y11_34531 09ab24d875d407c8dcec93bb9d165d38 284 SUPERFAMILY SSF53474 37 272 3.84E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_09931 5e21a9ef8dc90b659229376bc2aa7039 239 SMART SM00421 160 217 1.7E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_09931 5e21a9ef8dc90b659229376bc2aa7039 239 Gene3D G3DSA:1.10.10.10 154 222 1.2E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_09931 5e21a9ef8dc90b659229376bc2aa7039 239 Gene3D G3DSA:3.30.450.20 20 135 4.9E-5 T 13-10-2018 Y11_09931 5e21a9ef8dc90b659229376bc2aa7039 239 Pfam PF08448 PAS fold 30 133 1.3E-5 T 13-10-2018 IPR013656 PAS fold-4 Y11_09931 5e21a9ef8dc90b659229376bc2aa7039 239 SUPERFAMILY SSF46894 145 222 1.05E-14 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_09931 5e21a9ef8dc90b659229376bc2aa7039 239 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 216 3.4E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_00471 45d71356eaf72049c483e24bae0f33ad 141 SUPERFAMILY SSF55729 1 130 4.92E-28 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_00471 45d71356eaf72049c483e24bae0f33ad 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 54.83 T 13-10-2018 IPR023072 Acetyltransferase, YpeA GO:0016747 Y11_00471 45d71356eaf72049c483e24bae0f33ad 141 Pfam PF00583 Acetyltransferase (GNAT) family 22 123 3.7E-17 T 13-10-2018 IPR000182 GNAT domain Y11_00471 45d71356eaf72049c483e24bae0f33ad 141 Gene3D G3DSA:3.40.630.30 1 141 4.3E-42 T 13-10-2018 Y11_35581 0b6972e9379c17f85fe47a424b4aec72 923 Pfam PF07660 Secretin and TonB N terminus short domain 56 104 2.5E-10 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Y11_35581 0b6972e9379c17f85fe47a424b4aec72 923 Gene3D G3DSA:2.40.170.20 305 922 2.2E-11 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Y11_35581 0b6972e9379c17f85fe47a424b4aec72 923 SMART SM00965 55 105 6.3E-13 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Y11_35581 0b6972e9379c17f85fe47a424b4aec72 923 Pfam PF07715 TonB-dependent Receptor Plug Domain 134 257 1.7E-9 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Y11_35581 0b6972e9379c17f85fe47a424b4aec72 923 SUPERFAMILY SSF56935 113 922 6.87E-52 T 13-10-2018 Y11_35581 0b6972e9379c17f85fe47a424b4aec72 923 Gene3D G3DSA:3.55.50.30 25 126 2.1E-23 T 13-10-2018 Y11_35581 0b6972e9379c17f85fe47a424b4aec72 923 Gene3D G3DSA:2.170.130.10 127 260 2.3E-6 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Y11_01961 84e2ca2ed5dbc239648075f668c25fb9 182 SUPERFAMILY SSF55811 11 167 2.03E-33 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Y11_01961 84e2ca2ed5dbc239648075f668c25fb9 182 Gene3D G3DSA:3.90.79.10 2 178 2.2E-55 T 13-10-2018 Y11_01961 84e2ca2ed5dbc239648075f668c25fb9 182 PIRSF PIRSF017340 2 171 9.7E-69 T 13-10-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 Y11_01961 84e2ca2ed5dbc239648075f668c25fb9 182 Pfam PF00293 NUDIX domain 37 151 1.7E-17 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Y11_22001 8eee045884836aae3ea8196376f697aa 361 PIRSF PIRSF001361 1 356 3.5E-164 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Y11_22001 8eee045884836aae3ea8196376f697aa 361 Gene3D G3DSA:3.20.20.70 5 353 2.3E-156 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_22001 8eee045884836aae3ea8196376f697aa 361 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 351 9.0E-168 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Y11_22001 8eee045884836aae3ea8196376f697aa 361 Pfam PF00793 DAHP synthetase I family 43 342 1.2E-105 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Y11_22001 8eee045884836aae3ea8196376f697aa 361 SUPERFAMILY SSF51569 10 349 5.31E-136 T 13-10-2018 Y11_31691 1f4289b1793f1c3268511ae24ccb531f 639 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 276 289 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Y11_31691 1f4289b1793f1c3268511ae24ccb531f 639 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 327 635 5.7E-143 T 13-10-2018 IPR018659 Protein of unknown function DUF2090 Y11_31691 1f4289b1793f1c3268511ae24ccb531f 639 SUPERFAMILY SSF53613 8 331 3.74E-70 T 13-10-2018 IPR029056 Ribokinase-like Y11_31691 1f4289b1793f1c3268511ae24ccb531f 639 Gene3D G3DSA:3.40.1190.20 11 314 2.6E-90 T 13-10-2018 IPR029056 Ribokinase-like Y11_31691 1f4289b1793f1c3268511ae24ccb531f 639 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 8 332 6.4E-125 T 13-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 Y11_31691 1f4289b1793f1c3268511ae24ccb531f 639 Pfam PF00294 pfkB family carbohydrate kinase 9 324 1.2E-46 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Y11_31691 1f4289b1793f1c3268511ae24ccb531f 639 Gene3D G3DSA:2.20.150.10 16 111 2.6E-90 T 13-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 Y11_31691 1f4289b1793f1c3268511ae24ccb531f 639 Gene3D G3DSA:3.20.20.70 343 635 2.8E-54 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_07511 b5de572ec6a5ba69a7713b79e4fac3f7 232 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 15 232 2.0E-76 T 13-10-2018 IPR009331 Oligogalacturonate-specific porin Y11_07511 b5de572ec6a5ba69a7713b79e4fac3f7 232 SUPERFAMILY SSF56935 50 232 2.06E-14 T 13-10-2018 Y11_07511 b5de572ec6a5ba69a7713b79e4fac3f7 232 Gene3D G3DSA:2.40.160.40 21 232 6.1E-76 T 13-10-2018 Y11_26921 d9685822ed833cc6a20fa363f471a7fd 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 1.1E-20 T 13-10-2018 IPR012451 Protein of unknown function DUF1656 Y11_26921 d9685822ed833cc6a20fa363f471a7fd 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 23.173 T 13-10-2018 IPR012451 Protein of unknown function DUF1656 Y11_31461 a943618713ed2e080714f493fea64b7d 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 36.513 T 13-10-2018 IPR019598 Universal stress protein B Y11_31461 a943618713ed2e080714f493fea64b7d 111 Pfam PF10625 Universal stress protein B (UspB) 1 105 6.4E-54 T 13-10-2018 IPR019598 Universal stress protein B Y11_39241 becffd2500379105d75189b2ce42f531 191 SUPERFAMILY SSF55846 7 185 4.32E-67 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Y11_39241 becffd2500379105d75189b2ce42f531 191 Gene3D G3DSA:3.40.80.10 8 188 5.6E-58 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Y11_39241 becffd2500379105d75189b2ce42f531 191 SMART SM00644 22 172 1.2E-53 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Y11_39241 becffd2500379105d75189b2ce42f531 191 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 35 173 3.4E-26 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Y11_33681 b0dea20d386fc89b6d59872ee595b8f0 358 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 15 355 57.678 T 13-10-2018 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 Y11_33681 b0dea20d386fc89b6d59872ee595b8f0 358 SUPERFAMILY SSF160355 61 326 1.2E-83 T 13-10-2018 Y11_33681 b0dea20d386fc89b6d59872ee595b8f0 358 Pfam PF02706 Chain length determinant protein 22 92 5.5E-14 T 13-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Y11_38651 1ff538c2bcc2f0a8e412fd9bba79e5e9 196 Pfam PF00849 RNA pseudouridylate synthase 2 146 5.1E-25 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_38651 1ff538c2bcc2f0a8e412fd9bba79e5e9 196 SUPERFAMILY SSF55120 1 193 6.72E-55 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_38651 1ff538c2bcc2f0a8e412fd9bba79e5e9 196 Gene3D G3DSA:3.30.2350.10 1 195 5.6E-64 T 13-10-2018 Y11_38651 1ff538c2bcc2f0a8e412fd9bba79e5e9 196 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 37 51 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_27751 f7518082249b5ec93424526bafc17247 135 Pfam PF06146 Phosphate-starvation-inducible E 60 122 5.0E-15 T 13-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like Y11_27751 f7518082249b5ec93424526bafc17247 135 Hamap MF_01048 Protein PsiE [psiE]. 1 135 25.739 T 13-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 Y11_27751 f7518082249b5ec93424526bafc17247 135 PIRSF PIRSF029598 1 135 2.0E-47 T 13-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 Y11_25771 149fb9ff8750afa21008a2b4e17e1ab1 167 Gene3D G3DSA:3.30.2010.10 56 161 2.8E-7 T 13-10-2018 Y11_25771 149fb9ff8750afa21008a2b4e17e1ab1 167 Pfam PF01863 Protein of unknown function DUF45 32 149 5.8E-11 T 13-10-2018 IPR002725 Protein of unknown function DUF45 Y11_35801 936a33af8f8a3027d210d1f62b79521c 202 Gene3D G3DSA:1.10.357.10 6 196 3.7E-26 T 13-10-2018 Y11_35801 936a33af8f8a3027d210d1f62b79521c 202 SUPERFAMILY SSF46689 11 77 1.74E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_35801 936a33af8f8a3027d210d1f62b79521c 202 SUPERFAMILY SSF48498 85 184 7.19E-5 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Y11_35801 936a33af8f8a3027d210d1f62b79521c 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 60 1.4E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Y11_29581 26fba339bb59628dc95a44847cf181c4 623 TIGRFAM TIGR00794 kup: potassium uptake protein 98 551 6.3E-185 T 13-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 Y11_29581 26fba339bb59628dc95a44847cf181c4 623 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 6 623 33.865 T 13-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup Y11_29581 26fba339bb59628dc95a44847cf181c4 623 Pfam PF02705 K+ potassium transporter 15 545 1.6E-209 T 13-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 Y11_38221 442fabf080786f65e1a5bca841dc4bcc 639 SUPERFAMILY SSF53955 473 635 1.63E-50 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Y11_38221 442fabf080786f65e1a5bca841dc4bcc 639 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 495 523 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Y11_38221 442fabf080786f65e1a5bca841dc4bcc 639 Gene3D G3DSA:1.10.530.10 467 639 1.7E-52 T 13-10-2018 Y11_38221 442fabf080786f65e1a5bca841dc4bcc 639 Pfam PF01464 Transglycosylase SLT domain 478 590 3.8E-33 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Y11_38221 442fabf080786f65e1a5bca841dc4bcc 639 SUPERFAMILY SSF48435 23 471 1.14E-136 T 13-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 Y11_38221 442fabf080786f65e1a5bca841dc4bcc 639 Gene3D G3DSA:1.10.1240.20 397 466 1.3E-28 T 13-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 Y11_38221 442fabf080786f65e1a5bca841dc4bcc 639 Pfam PF14718 Soluble lytic murein transglycosylase L domain 400 466 1.6E-25 T 13-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 Y11_38221 442fabf080786f65e1a5bca841dc4bcc 639 Gene3D G3DSA:1.25.20.10 23 384 1.5E-118 T 13-10-2018 Y11_03351 64ad2491c8aee58de8f77e7a9c962d19 360 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 20 357 8.3E-126 T 13-10-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 Y11_03351 64ad2491c8aee58de8f77e7a9c962d19 360 Pfam PF03601 Conserved hypothetical protein 698 22 337 6.6E-107 T 13-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 Y11_29621 0d6bd89e880e1f5dd168f04157770a52 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 2.1E-186 T 13-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 Y11_29621 0d6bd89e880e1f5dd168f04157770a52 330 PIRSF PIRSF001555 1 329 8.1E-156 T 13-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 Y11_29621 0d6bd89e880e1f5dd168f04157770a52 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 45.712 T 13-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 Y11_29621 0d6bd89e880e1f5dd168f04157770a52 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 1.3E-95 T 13-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 Y11_29621 0d6bd89e880e1f5dd168f04157770a52 330 Gene3D G3DSA:3.30.930.10 1 330 1.5E-144 T 13-10-2018 Y11_29621 0d6bd89e880e1f5dd168f04157770a52 330 SUPERFAMILY SSF55681 5 329 4.26E-98 T 13-10-2018 Y11_06611 eab2b07715939f50d14b072d3b6f4b08 437 Gene3D G3DSA:1.10.4160.10 17 432 1.8E-39 T 13-10-2018 IPR038271 Purine-cytosine permease superfamily Y11_06611 eab2b07715939f50d14b072d3b6f4b08 437 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 32 397 1.6E-21 T 13-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Y11_40541 1cd346f487406032266a1e1b6f411f99 386 Gene3D G3DSA:1.20.1250.20 3 197 3.4E-34 T 13-10-2018 Y11_40541 1cd346f487406032266a1e1b6f411f99 386 SUPERFAMILY SSF103473 3 378 2.09E-58 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_40541 1cd346f487406032266a1e1b6f411f99 386 Pfam PF07690 Major Facilitator Superfamily 8 311 6.1E-39 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_40541 1cd346f487406032266a1e1b6f411f99 386 Gene3D G3DSA:1.20.1250.20 198 382 3.2E-14 T 13-10-2018 Y11_36841 047f7be37adb75fa97b1e0e12e877a50 331 Pfam PF01136 Peptidase family U32 76 330 9.3E-67 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Y11_36841 047f7be37adb75fa97b1e0e12e877a50 331 SUPERFAMILY SSF51391 11 160 3.66E-5 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Y11_36841 047f7be37adb75fa97b1e0e12e877a50 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Y11_10521 e30585f2275ece838cbe62df8f9ab8e0 223 Pfam PF03594 Benzoate membrane transport protein 2 207 2.2E-75 T 13-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 Y11_10521 e30585f2275ece838cbe62df8f9ab8e0 223 TIGRFAM TIGR00843 benE: benzoate transporter 3 209 6.1E-73 T 13-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 Y11_30401 932c5acb674fc88481830e97d104db34 118 Gene3D G3DSA:4.10.860.10 1 58 5.4E-14 T 13-10-2018 Y11_30401 932c5acb674fc88481830e97d104db34 118 Pfam PF10928 Protein of unknown function (DUF2810) 64 116 8.8E-33 T 13-10-2018 IPR021230 Protein of unknown function DUF2810 Y11_30401 932c5acb674fc88481830e97d104db34 118 Gene3D G3DSA:3.30.1370.150 59 118 8.1E-35 T 13-10-2018 Y11_04171 13fe341a6dc62bf8064bb1d2eaebc68b 230 Pfam PF04239 Protein of unknown function (DUF421) 103 168 3.5E-16 T 13-10-2018 IPR007353 Protein of unknown function DUF421 Y11_04171 13fe341a6dc62bf8064bb1d2eaebc68b 230 Gene3D G3DSA:3.30.240.20 95 168 5.0E-21 T 13-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Y11_33621 a4df92638a789e944dfed12a3200af6d 623 SMART SM00060 50 155 7.5E-7 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 Y11_33621 a4df92638a789e944dfed12a3200af6d 623 SUPERFAMILY SSF49265 50 168 7.87E-10 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 Y11_33621 a4df92638a789e944dfed12a3200af6d 623 Gene3D G3DSA:2.60.40.10 51 166 1.6E-34 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_33621 a4df92638a789e944dfed12a3200af6d 623 Pfam PF00295 Glycosyl hydrolases family 28 338 578 2.4E-23 T 13-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 Y11_33621 a4df92638a789e944dfed12a3200af6d 623 Gene3D G3DSA:2.160.20.10 167 623 2.6E-147 T 13-10-2018 IPR012334 Pectin lyase fold Y11_33621 a4df92638a789e944dfed12a3200af6d 623 SUPERFAMILY SSF51126 161 580 7.86E-73 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor Y11_35271 2e651478d71d2122160d226104baf97e 196 Pfam PF05802 Enterobacterial EspB protein 34 193 2.2E-5 T 13-10-2018 IPR008611 Protein EaeB Y11_16761 871f174a653ed5c53b81702639947587 307 Pfam PF00535 Glycosyl transferase family 2 9 179 2.9E-15 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Y11_16761 871f174a653ed5c53b81702639947587 307 TIGRFAM TIGR01556 rhamnosyltran: rhamnosyltransferase 13 298 1.2E-131 T 13-10-2018 IPR006446 Rhamnosyltransferase Y11_16761 871f174a653ed5c53b81702639947587 307 SUPERFAMILY SSF53448 6 281 2.81E-37 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_16761 871f174a653ed5c53b81702639947587 307 Gene3D G3DSA:3.90.550.10 1 223 2.2E-28 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_34051 ecbfea2dc9d5f7fb1c8a35f122d1960b 206 Pfam PF01810 LysE type translocator 14 202 3.5E-45 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Y11_34051 ecbfea2dc9d5f7fb1c8a35f122d1960b 206 PIRSF PIRSF006324 1 205 3.8E-54 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Y11_08791 5fc8024a0e72f5899c34084c45c9d205 167 Gene3D G3DSA:3.40.30.10 1 167 1.5E-49 T 13-10-2018 Y11_08791 5fc8024a0e72f5899c34084c45c9d205 167 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 13-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 Y11_08791 5fc8024a0e72f5899c34084c45c9d205 167 Pfam PF08534 Redoxin 20 163 4.5E-28 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Y11_08791 5fc8024a0e72f5899c34084c45c9d205 167 Hamap MF_00269 Thiol peroxidase [tpx]. 4 167 39.958 T 13-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 Y11_08791 5fc8024a0e72f5899c34084c45c9d205 167 SUPERFAMILY SSF52833 4 164 2.66E-44 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_00031 85dcaf9a44c07a5fe0ad1819c2277a4e 354 Pfam PF01594 AI-2E family transporter 19 345 1.3E-79 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like Y11_33961 e1af899218a91413b935b4b50fc58e34 219 Gene3D G3DSA:1.10.357.10 10 173 1.8E-13 T 13-10-2018 Y11_33961 e1af899218a91413b935b4b50fc58e34 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 69 2.2E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Y11_33961 e1af899218a91413b935b4b50fc58e34 219 SUPERFAMILY SSF46689 19 80 3.45E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_20601 90ee9585fb76fab54b7a325ffe9cbb90 259 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 34 259 2.1E-51 T 13-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 Y11_20601 90ee9585fb76fab54b7a325ffe9cbb90 259 SUPERFAMILY SSF111364 26 259 2.75E-33 T 13-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 Y11_17031 02c800ff81dff0506ef4eda972f333f3 307 Pfam PF00146 NADH dehydrogenase 9 301 2.2E-51 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17031 02c800ff81dff0506ef4eda972f333f3 307 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 193 206 - T 13-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_39981 4d80550ca183ddd3d5575e62183b6f79 224 Pfam PF01548 Transposase 16 156 4.9E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_37021 2c0bded75424b2b256f9627d9fe4df53 255 Gene3D G3DSA:3.60.15.10 1 254 2.0E-67 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_37021 2c0bded75424b2b256f9627d9fe4df53 255 Pfam PF12706 Beta-lactamase superfamily domain 50 226 5.6E-17 T 13-10-2018 IPR001279 Metallo-beta-lactamase Y11_37021 2c0bded75424b2b256f9627d9fe4df53 255 SUPERFAMILY SSF56281 1 254 1.21E-39 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_37021 2c0bded75424b2b256f9627d9fe4df53 255 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 251 4.4E-120 T 13-10-2018 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Y11_35731 00cc477dcce8ab43c9d682423bda1b7a 212 Gene3D G3DSA:3.40.50.720 1 204 5.5E-36 T 13-10-2018 Y11_35731 00cc477dcce8ab43c9d682423bda1b7a 212 Pfam PF13460 NAD(P)H-binding 24 191 1.3E-34 T 13-10-2018 IPR016040 NAD(P)-binding domain Y11_35731 00cc477dcce8ab43c9d682423bda1b7a 212 SUPERFAMILY SSF51735 1 203 1.21E-29 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_38851 4854ad6ab37e48885014e26201e0ac7e 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 1.5E-133 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Y11_38851 4854ad6ab37e48885014e26201e0ac7e 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Y11_38851 4854ad6ab37e48885014e26201e0ac7e 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.114 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Y11_38851 4854ad6ab37e48885014e26201e0ac7e 363 SUPERFAMILY SSF53659 2 360 2.34E-121 T 13-10-2018 Y11_38851 4854ad6ab37e48885014e26201e0ac7e 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 3.5E-165 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Y11_38851 4854ad6ab37e48885014e26201e0ac7e 363 SMART SM01329 6 355 1.7E-197 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Y11_38851 4854ad6ab37e48885014e26201e0ac7e 363 Gene3D G3DSA:3.40.718.10 1 363 1.5E-154 T 13-10-2018 Y11_00991 0273745f4ba08db2052108dfb8767667 411 Gene3D G3DSA:3.40.640.10 70 293 3.8E-134 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_00991 0273745f4ba08db2052108dfb8767667 411 Gene3D G3DSA:3.90.1150.10 294 391 3.8E-134 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_00991 0273745f4ba08db2052108dfb8767667 411 SUPERFAMILY SSF53383 10 394 4.57E-107 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_00991 0273745f4ba08db2052108dfb8767667 411 Pfam PF00155 Aminotransferase class I and II 37 387 8.2E-57 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_16401 a8c0839c72eedf44092c534ce472f5c2 340 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 325 9.4E-42 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_12241 837d54acb3408f81d608be58c1b6e892 162 SUPERFAMILY SSF55909 4 162 2.16E-75 T 13-10-2018 Y11_12241 837d54acb3408f81d608be58c1b6e892 162 Pfam PF04996 Succinylarginine dihydrolase 4 162 2.7E-82 T 13-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 Y11_12241 837d54acb3408f81d608be58c1b6e892 162 Gene3D G3DSA:3.75.10.20 1 162 8.1E-78 T 13-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 Y11_22701 e46d41c3d02ecc96a998bd633c5418c0 87 Pfam PF04703 FaeA-like protein 38 71 3.0E-4 T 13-10-2018 IPR006793 FaeA-like protein GO:0006355|GO:0009289 Y11_22701 e46d41c3d02ecc96a998bd633c5418c0 87 Gene3D G3DSA:1.10.10.10 24 81 3.0E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_36921 ce77f4bd8f5afa2c156316bfb2cb6d1e 378 Gene3D G3DSA:1.50.10.100 3 370 3.6E-117 T 13-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Y11_36921 ce77f4bd8f5afa2c156316bfb2cb6d1e 378 SUPERFAMILY SSF48230 46 325 8.61E-49 T 13-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Y11_36921 ce77f4bd8f5afa2c156316bfb2cb6d1e 378 Pfam PF05426 Alginate lyase 39 318 1.9E-71 T 13-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 Y11_08891 c226d02823c1a9c8b2cbe2188c305a9a 110 SUPERFAMILY SSF103481 6 105 6.15E-20 T 13-10-2018 Y11_08891 c226d02823c1a9c8b2cbe2188c305a9a 110 Gene3D G3DSA:1.10.3730.20 1 110 3.5E-37 T 13-10-2018 Y11_08891 c226d02823c1a9c8b2cbe2188c305a9a 110 Pfam PF00893 Small Multidrug Resistance protein 4 94 1.8E-27 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Y11_02331 817a85e6b0716d97521673e7c0fbaa0f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 5.4E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_02331 817a85e6b0716d97521673e7c0fbaa0f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 5.4E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_02331 817a85e6b0716d97521673e7c0fbaa0f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 5.4E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_02331 817a85e6b0716d97521673e7c0fbaa0f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 5.4E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_02331 817a85e6b0716d97521673e7c0fbaa0f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 5.4E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_02331 817a85e6b0716d97521673e7c0fbaa0f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 5.4E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_02331 817a85e6b0716d97521673e7c0fbaa0f 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Y11_02331 817a85e6b0716d97521673e7c0fbaa0f 254 Pfam PF00106 short chain dehydrogenase 11 203 5.1E-63 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_02331 817a85e6b0716d97521673e7c0fbaa0f 254 Gene3D G3DSA:3.40.50.720 1 253 7.8E-78 T 13-10-2018 Y11_02331 817a85e6b0716d97521673e7c0fbaa0f 254 SUPERFAMILY SSF51735 8 252 8.19E-80 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_02331 817a85e6b0716d97521673e7c0fbaa0f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.9E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_02331 817a85e6b0716d97521673e7c0fbaa0f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 8.9E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_02331 817a85e6b0716d97521673e7c0fbaa0f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.9E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Y11_06371 d3cf11a05df75c85eb6d2a66ff23a3a6 456 Pfam PF04715 Anthranilate synthase component I, N terminal region 18 154 1.6E-29 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Y11_06371 d3cf11a05df75c85eb6d2a66ff23a3a6 456 PRINTS PR00095 Anthranilate synthase component I signature 401 415 1.0E-17 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Y11_06371 d3cf11a05df75c85eb6d2a66ff23a3a6 456 PRINTS PR00095 Anthranilate synthase component I signature 306 319 1.0E-17 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Y11_06371 d3cf11a05df75c85eb6d2a66ff23a3a6 456 PRINTS PR00095 Anthranilate synthase component I signature 292 305 1.0E-17 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Y11_06371 d3cf11a05df75c85eb6d2a66ff23a3a6 456 PRINTS PR00095 Anthranilate synthase component I signature 386 400 1.0E-17 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Y11_06371 d3cf11a05df75c85eb6d2a66ff23a3a6 456 Gene3D G3DSA:3.60.120.10 2 454 6.0E-175 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Y11_06371 d3cf11a05df75c85eb6d2a66ff23a3a6 456 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 107 447 2.8E-130 T 13-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 Y11_06371 d3cf11a05df75c85eb6d2a66ff23a3a6 456 Pfam PF00425 chorismate binding enzyme 190 444 4.7E-94 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Y11_06371 d3cf11a05df75c85eb6d2a66ff23a3a6 456 SUPERFAMILY SSF56322 7 452 4.97E-146 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Y11_07281 468402dc21a47cedf227d2e163ee2bbd 796 Gene3D G3DSA:2.60.40.2610 623 714 5.5E-11 T 13-10-2018 Y11_07281 468402dc21a47cedf227d2e163ee2bbd 796 Pfam PF13953 PapC C-terminal domain 720 782 3.0E-11 T 13-10-2018 IPR025949 PapC-like, C-terminal domain Y11_07281 468402dc21a47cedf227d2e163ee2bbd 796 Gene3D G3DSA:2.60.40.3110 210 313 7.9E-8 T 13-10-2018 Y11_07281 468402dc21a47cedf227d2e163ee2bbd 796 Pfam PF00577 Outer membrane usher protein 215 691 1.6E-29 T 13-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 Y11_16211 b0674a8fc01620c20050baf1dea50d7c 113 PIRSF PIRSF011503 1 113 1.5E-36 T 13-10-2018 IPR009192 Diol/glycerol dehydratase reactivating factor, small subunit Y11_16211 b0674a8fc01620c20050baf1dea50d7c 113 Pfam PF02288 Dehydratase medium subunit 7 113 2.1E-32 T 13-10-2018 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor Y11_16211 b0674a8fc01620c20050baf1dea50d7c 113 SUPERFAMILY SSF52968 2 113 1.16E-35 T 13-10-2018 IPR010254 B12-dependent dehydratases, beta subunit Y11_16211 b0674a8fc01620c20050baf1dea50d7c 113 Gene3D G3DSA:3.40.50.10150 1 113 8.4E-37 T 13-10-2018 IPR010254 B12-dependent dehydratases, beta subunit Y11_04731 e016f9d33f5b16b9e7a25873bb20e2c4 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 3.2E-19 T 13-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 Y11_04731 e016f9d33f5b16b9e7a25873bb20e2c4 105 SMART SM00992 3 102 1.6E-37 T 13-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 Y11_04731 e016f9d33f5b16b9e7a25873bb20e2c4 105 Gene3D G3DSA:2.30.30.390 1 105 1.2E-39 T 13-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 Y11_04731 e016f9d33f5b16b9e7a25873bb20e2c4 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 37.553 T 13-10-2018 IPR022866 Heat shock protein HspQ Y11_04731 e016f9d33f5b16b9e7a25873bb20e2c4 105 SUPERFAMILY SSF141255 4 96 4.58E-30 T 13-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 Y11_04731 e016f9d33f5b16b9e7a25873bb20e2c4 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 102 1.6E-32 T 13-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 Y11_05891 11ab8d14662e385e2fb6d9e72806e0bb 134 SUPERFAMILY SSF46785 20 126 1.69E-30 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_05891 11ab8d14662e385e2fb6d9e72806e0bb 134 Pfam PF01638 HxlR-like helix-turn-helix 36 123 2.8E-27 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type Y11_05891 11ab8d14662e385e2fb6d9e72806e0bb 134 Gene3D G3DSA:1.10.10.10 9 133 3.0E-38 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_29471 6dff01b2203c3e052d3f8307d4919897 265 Pfam PF00665 Integrase core domain 107 219 4.0E-23 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_29471 6dff01b2203c3e052d3f8307d4919897 265 SUPERFAMILY SSF53098 104 260 1.09E-37 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_29471 6dff01b2203c3e052d3f8307d4919897 265 Gene3D G3DSA:3.30.420.10 105 250 1.9E-13 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_37361 3c488a762e736177ad00943e3952c22f 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 354 4.7E-75 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Y11_37361 3c488a762e736177ad00943e3952c22f 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.7E-141 T 13-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 Y11_p0461 d442652fd2217e106d9c4c63225818f3 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 1.8E-14 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Y11_p0461 d442652fd2217e106d9c4c63225818f3 99 PIRSF PIRSF029218 1 96 5.5E-29 T 13-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 Y11_p0461 d442652fd2217e106d9c4c63225818f3 99 Gene3D G3DSA:3.30.2310.20 1 93 4.2E-19 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Y11_12871 9435e7133f675d922b3b786ebe6557cf 90 Gene3D G3DSA:3.10.450.530 1 83 1.4E-12 T 13-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily Y11_12871 9435e7133f675d922b3b786ebe6557cf 90 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 81 1.0E-20 T 13-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system Y11_07441 4fb08b3de00a9ed711ced37180cb4761 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 4.5E-14 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Y11_07441 4fb08b3de00a9ed711ced37180cb4761 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 4.0E-41 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal Y11_07441 4fb08b3de00a9ed711ced37180cb4761 263 Gene3D G3DSA:3.30.450.40 85 263 5.5E-66 T 13-10-2018 IPR029016 GAF-like domain superfamily Y11_07441 4fb08b3de00a9ed711ced37180cb4761 263 SUPERFAMILY SSF46785 13 86 8.84E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_07441 4fb08b3de00a9ed711ced37180cb4761 263 SUPERFAMILY SSF55781 77 259 1.9E-53 T 13-10-2018 Y11_07441 4fb08b3de00a9ed711ced37180cb4761 263 SMART SM00346 13 102 1.4E-36 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Y11_07441 4fb08b3de00a9ed711ced37180cb4761 263 Gene3D G3DSA:1.10.10.10 6 82 2.3E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_37491 5dc3edfb514ff490eca56658df6644a6 361 Gene3D G3DSA:1.10.4160.10 1 361 3.8E-37 T 13-10-2018 IPR038271 Purine-cytosine permease superfamily Y11_37491 5dc3edfb514ff490eca56658df6644a6 361 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 3 324 1.8E-15 T 13-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Y11_43191 12145ea9c2cd108995aadf69a5a0bcaf 121 PIRSF PIRSF011474 2 121 3.2E-37 T 13-10-2018 IPR009693 Glucitol operon activator Y11_43191 12145ea9c2cd108995aadf69a5a0bcaf 121 Pfam PF06923 Glucitol operon activator protein (GutM) 7 113 4.1E-35 T 13-10-2018 IPR009693 Glucitol operon activator Y11_34611 c40365370d525efcb20015bf48d95db5 176 Pfam PF09335 SNARE associated Golgi protein 41 162 4.9E-13 T 13-10-2018 IPR032816 SNARE associated Golgi protein Y11_00361 a4c943659b04bf031f5a788200067482 88 Gene3D G3DSA:3.30.70.920 6 76 4.1E-25 T 13-10-2018 Y11_00361 a4c943659b04bf031f5a788200067482 88 Pfam PF03927 NapD protein 6 81 4.9E-25 T 13-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly Y11_00361 a4c943659b04bf031f5a788200067482 88 Hamap MF_02200 Chaperone NapD [napD]. 6 83 18.421 T 13-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly Y11_14471 b1058151f58dbe13bd758f383b458af4 146 SUPERFAMILY SSF140566 2 120 2.75E-18 T 13-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 Y11_14471 b1058151f58dbe13bd758f383b458af4 146 Pfam PF05130 FlgN protein 2 135 2.0E-24 T 13-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 Y11_14471 b1058151f58dbe13bd758f383b458af4 146 Gene3D G3DSA:1.20.58.300 4 120 4.3E-12 T 13-10-2018 Y11_23171 ac0eaaa51bc384655eac46705f9f7e5d 250 Pfam PF01435 Peptidase family M48 77 245 3.0E-25 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Y11_23171 ac0eaaa51bc384655eac46705f9f7e5d 250 Gene3D G3DSA:3.30.2010.10 60 149 1.5E-8 T 13-10-2018 Y11_29611 be9310f27ff84738e19ac15a73ac2fce 223 Pfam PF07077 Protein of unknown function (DUF1345) 39 213 6.9E-55 T 13-10-2018 IPR009781 Protein of unknown function DUF1345 Y11_02291 763b7a9fc248b851c5c32015336f126e 163 Pfam PF06496 Protein of unknown function (DUF1097) 8 141 1.4E-36 T 13-10-2018 IPR009476 Protein of unknown function DUF1097 Y11_39451 7c1fc14d03da4f19f7b21a32ada8c7ac 178 SUPERFAMILY SSF53271 3 173 8.52E-56 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Y11_39451 7c1fc14d03da4f19f7b21a32ada8c7ac 178 Pfam PF00156 Phosphoribosyl transferase domain 12 160 5.9E-26 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Y11_39451 7c1fc14d03da4f19f7b21a32ada8c7ac 178 Gene3D G3DSA:3.40.50.2020 1 176 9.8E-67 T 13-10-2018 Y11_39451 7c1fc14d03da4f19f7b21a32ada8c7ac 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 2.5E-74 T 13-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 Y11_00401 2a9d9019938e341c702b46fb8a25e870 191 SUPERFAMILY SSF55811 9 188 2.17E-51 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Y11_00401 2a9d9019938e341c702b46fb8a25e870 191 Gene3D G3DSA:3.90.79.10 2 190 2.1E-57 T 13-10-2018 Y11_00401 2a9d9019938e341c702b46fb8a25e870 191 Pfam PF00293 NUDIX domain 45 169 6.0E-13 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Y11_00401 2a9d9019938e341c702b46fb8a25e870 191 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 9 185 4.9E-55 T 13-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 Y11_17101 43762b0ab2903ade5ab657c870642ad8 133 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 3 131 5.0E-38 T 13-10-2018 IPR010005 Formate hydrogenlyase maturation HycH Y11_17101 43762b0ab2903ade5ab657c870642ad8 133 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 3 131 2.0E-56 T 13-10-2018 IPR010005 Formate hydrogenlyase maturation HycH Y11_24601 c9113addd50dd0dade51a3b7fe9cbd1f 410 Pfam PF13629 Pilus formation protein N terminal region 2 58 2.2E-9 T 13-10-2018 IPR032789 Pilus formation protein, N-terminal Y11_24601 c9113addd50dd0dade51a3b7fe9cbd1f 410 Pfam PF00263 Bacterial type II and III secretion system protein 209 362 2.1E-37 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Y11_24601 c9113addd50dd0dade51a3b7fe9cbd1f 410 PRINTS PR00811 Bacterial general secretion pathway protein D signature 327 345 3.9E-5 T 13-10-2018 IPR001775 GspD/PilQ family Y11_24601 c9113addd50dd0dade51a3b7fe9cbd1f 410 PRINTS PR00811 Bacterial general secretion pathway protein D signature 150 160 3.9E-5 T 13-10-2018 IPR001775 GspD/PilQ family Y11_04361 119f58d5e855c2e30dac7eab18136034 440 Pfam PF17193 MukF C-terminal domain 283 440 1.9E-78 T 13-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain Y11_04361 119f58d5e855c2e30dac7eab18136034 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 55.416 T 13-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 Y11_04361 119f58d5e855c2e30dac7eab18136034 440 Pfam PF03882 MukF winged-helix domain 3 117 7.7E-59 T 13-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain Y11_04361 119f58d5e855c2e30dac7eab18136034 440 Gene3D G3DSA:1.10.10.10 24 118 1.2E-53 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_04361 119f58d5e855c2e30dac7eab18136034 440 SUPERFAMILY SSF140570 119 281 1.96E-76 T 13-10-2018 IPR036141 MukF, middle domain superfamily Y11_04361 119f58d5e855c2e30dac7eab18136034 440 Pfam PF17192 MukF middle domain 121 281 5.1E-85 T 13-10-2018 IPR033440 Chromosome partition protein MukF, middle domain Y11_04361 119f58d5e855c2e30dac7eab18136034 440 Gene3D G3DSA:1.10.225.40 353 440 2.3E-41 T 13-10-2018 IPR038198 MukF, C-terminal domain superfamily Y11_04361 119f58d5e855c2e30dac7eab18136034 440 PIRSF PIRSF018282 1 440 1.3E-247 T 13-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 Y11_04361 119f58d5e855c2e30dac7eab18136034 440 SUPERFAMILY SSF46785 8 118 1.9E-50 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_04361 119f58d5e855c2e30dac7eab18136034 440 Gene3D G3DSA:1.20.58.590 119 311 1.7E-87 T 13-10-2018 IPR036141 MukF, middle domain superfamily Y11_06741 5dfb03531603496da8daac746492e292 196 Gene3D G3DSA:3.40.50.2300 1 105 1.1E-17 T 13-10-2018 Y11_06741 5dfb03531603496da8daac746492e292 196 Pfam PF00072 Response regulator receiver domain 3 74 5.0E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Y11_06741 5dfb03531603496da8daac746492e292 196 PIRSF PIRSF006171 1 187 3.0E-63 T 13-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 Y11_06741 5dfb03531603496da8daac746492e292 196 SUPERFAMILY SSF52172 3 93 5.27E-20 T 13-10-2018 IPR011006 CheY-like superfamily Y11_08571 a08ca003a1fba64f0fcea32bfe605e0b 507 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 495 52.756 T 13-10-2018 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0016020|GO:1904680 Y11_08571 a08ca003a1fba64f0fcea32bfe605e0b 507 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 158 170 - T 13-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 Y11_08571 a08ca003a1fba64f0fcea32bfe605e0b 507 Gene3D G3DSA:1.20.1250.20 18 492 3.3E-113 T 13-10-2018 Y11_08571 a08ca003a1fba64f0fcea32bfe605e0b 507 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 23 491 6.9E-139 T 13-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 Y11_08571 a08ca003a1fba64f0fcea32bfe605e0b 507 SUPERFAMILY SSF103473 8 491 8.37E-31 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_08571 a08ca003a1fba64f0fcea32bfe605e0b 507 Pfam PF00854 POT family 95 451 2.1E-87 T 13-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 Y11_p0531 6ad0934cf4a64b4a695e09ab66ebdb4d 141 Pfam PF05932 Tir chaperone protein (CesT) family 7 119 8.5E-25 T 13-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 Y11_p0531 6ad0934cf4a64b4a695e09ab66ebdb4d 141 SUPERFAMILY SSF69635 3 118 6.59E-30 T 13-10-2018 Y11_p0531 6ad0934cf4a64b4a695e09ab66ebdb4d 141 Gene3D G3DSA:3.30.1460.10 1 141 2.5E-53 T 13-10-2018 Y11_04971 c288981f79dc26a048c0bc158f504508 845 SUPERFAMILY SSF53448 246 533 2.72E-27 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_04971 c288981f79dc26a048c0bc158f504508 845 Gene3D G3DSA:3.90.550.10 242 470 1.7E-12 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_04971 c288981f79dc26a048c0bc158f504508 845 Pfam PF00535 Glycosyl transferase family 2 248 430 4.1E-22 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Y11_04971 c288981f79dc26a048c0bc158f504508 845 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 68 747 51.49 T 13-10-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 Y11_32461 7074b108c943fb57089fba824e67d5be 394 Hamap MF_01044 Protein TsgA [tsgA]. 1 390 28.828 T 13-10-2018 IPR023528 Major facilitator superfamily transporter, TsgA Y11_32461 7074b108c943fb57089fba824e67d5be 394 Pfam PF07690 Major Facilitator Superfamily 15 320 1.8E-22 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_32461 7074b108c943fb57089fba824e67d5be 394 Gene3D G3DSA:1.20.1250.20 2 188 8.1E-16 T 13-10-2018 Y11_32461 7074b108c943fb57089fba824e67d5be 394 Gene3D G3DSA:1.20.1250.20 206 388 8.2E-21 T 13-10-2018 Y11_32461 7074b108c943fb57089fba824e67d5be 394 SUPERFAMILY SSF103473 4 389 1.19E-38 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_21291 fd04d5a421b969c19cc430b3284ee756 421 Hamap MF_01063 Esterase FrsA [frsA]. 7 421 60.574 T 13-10-2018 IPR010520 UPF0255 family Y11_21291 fd04d5a421b969c19cc430b3284ee756 421 SUPERFAMILY SSF53474 52 417 4.09E-52 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_21291 fd04d5a421b969c19cc430b3284ee756 421 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 7 420 2.0E-214 T 13-10-2018 IPR010520 UPF0255 family Y11_21291 fd04d5a421b969c19cc430b3284ee756 421 Gene3D G3DSA:3.40.50.1820 22 420 5.4E-106 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_03321 2165f6fadee992d62ba4975f03593e21 103 SUPERFAMILY SSF49584 5 101 4.19E-21 T 13-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily Y11_03321 2165f6fadee992d62ba4975f03593e21 103 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 32 96 4.6E-17 T 13-10-2018 IPR016148 Pili assembly chaperone, C-terminal Y11_03321 2165f6fadee992d62ba4975f03593e21 103 Gene3D G3DSA:2.60.40.10 12 100 1.2E-26 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_26721 b16d850444d2312297dcf6a6a55d2de3 37 Gene3D G3DSA:3.20.20.70 1 37 9.1E-15 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_16641 1fa94aa193138774a2d0f2959a99d9a8 524 SUPERFAMILY SSF53756 205 428 3.61E-10 T 13-10-2018 Y11_16641 1fa94aa193138774a2d0f2959a99d9a8 524 Gene3D G3DSA:3.40.50.2000 243 423 1.2E-11 T 13-10-2018 Y11_04911 378d9ba8282359d1689fe9ead4ca1a33 194 Pfam PF00892 EamA-like transporter family 53 187 7.7E-17 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_04911 378d9ba8282359d1689fe9ead4ca1a33 194 SUPERFAMILY SSF103481 6 44 4.18E-5 T 13-10-2018 Y11_04911 378d9ba8282359d1689fe9ead4ca1a33 194 SUPERFAMILY SSF103481 87 189 3.53E-12 T 13-10-2018 Y11_21361 fb4f16235f85d45cda1f847768b836a8 210 Pfam PF13309 HTH domain 144 205 1.2E-16 T 13-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain Y11_21361 fb4f16235f85d45cda1f847768b836a8 210 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 9 128 2.0E-51 T 13-10-2018 IPR013559 YheO-like Y11_21361 fb4f16235f85d45cda1f847768b836a8 210 Pfam PF08348 YheO-like PAS domain 10 119 1.5E-32 T 13-10-2018 IPR013559 YheO-like Y11_08391 ff8d9583ddb087195331123c8f50cab8 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 6.6E-19 T 13-10-2018 IPR010710 Protein of unknown function DUF1289 Y11_27851 3011c01c7949ff4734ab11a311481d80 532 SUPERFAMILY SSF51645 10 531 3.27E-189 T 13-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Y11_27851 3011c01c7949ff4734ab11a311481d80 532 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 23 531 3.0E-250 T 13-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Y11_27851 3011c01c7949ff4734ab11a311481d80 532 Gene3D G3DSA:1.20.1220.12 411 532 1.1E-49 T 13-10-2018 Y11_27851 3011c01c7949ff4734ab11a311481d80 532 Pfam PF01274 Malate synthase 13 531 1.4E-207 T 13-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Y11_27851 3011c01c7949ff4734ab11a311481d80 532 Gene3D G3DSA:3.20.20.360 2 410 7.3E-192 T 13-10-2018 Y11_27851 3011c01c7949ff4734ab11a311481d80 532 PIRSF PIRSF001363 2 532 3.2E-247 T 13-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Y11_15331 54e81dab71e46f7f7b138bac79d3acf2 182 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 15 176 1.6E-53 T 13-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 Y11_15331 54e81dab71e46f7f7b138bac79d3acf2 182 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 14 176 1.2E-52 T 13-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 Y11_27111 72682931b6d373cbc6909cfdcb638e75 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 31.166 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Y11_27111 72682931b6d373cbc6909cfdcb638e75 197 SUPERFAMILY SSF52972 2 184 9.81E-59 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Y11_27111 72682931b6d373cbc6909cfdcb638e75 197 PIRSF PIRSF006305 1 191 2.5E-50 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Y11_27111 72682931b6d373cbc6909cfdcb638e75 197 Pfam PF02545 Maf-like protein 4 184 9.1E-57 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Y11_27111 72682931b6d373cbc6909cfdcb638e75 197 Gene3D G3DSA:3.90.950.10 2 190 7.2E-73 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Y11_27111 72682931b6d373cbc6909cfdcb638e75 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 3.8E-63 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Y11_31451 50f2b09bcd37d4dff9ea264abaa35d1d 148 Pfam PF00582 Universal stress protein family 3 138 2.9E-20 T 13-10-2018 IPR006016 UspA Y11_31451 50f2b09bcd37d4dff9ea264abaa35d1d 148 Gene3D G3DSA:3.40.50.620 2 142 1.3E-50 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_31451 50f2b09bcd37d4dff9ea264abaa35d1d 148 PIRSF PIRSF006276 1 141 7.8E-54 T 13-10-2018 IPR006015 Universal stress protein A Y11_31451 50f2b09bcd37d4dff9ea264abaa35d1d 148 SUPERFAMILY SSF52402 3 139 4.6E-31 T 13-10-2018 Y11_37601 bca5742de3bcb5353ba7f18c5a0c459a 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 307 7.8E-47 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_41991 b82595b52a90eb1d90348b56f9414ea1 224 Pfam PF01548 Transposase 16 156 1.2E-14 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_04871 63db9bb066d11d6f69ff978f68ebb375 222 Gene3D G3DSA:1.25.40.10 127 219 3.0E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_04871 63db9bb066d11d6f69ff978f68ebb375 222 SUPERFAMILY SSF48452 84 209 2.73E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_27641 96782f0e7d542595f6b1f6c074df2734 122 Gene3D G3DSA:1.10.3830.10 2 122 2.0E-42 T 13-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Y11_27641 96782f0e7d542595f6b1f6c074df2734 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Y11_27641 96782f0e7d542595f6b1f6c074df2734 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 4.8E-35 T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Y11_37331 5d15f456f2bcae339189ac616dad4869 149 Gene3D G3DSA:3.40.50.10110 1 146 2.7E-51 T 13-10-2018 IPR036768 DNA polymerase III subunit chi superfamily Y11_37331 5d15f456f2bcae339189ac616dad4869 149 SUPERFAMILY SSF102400 1 143 9.55E-48 T 13-10-2018 IPR036768 DNA polymerase III subunit chi superfamily Y11_37331 5d15f456f2bcae339189ac616dad4869 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 3.9E-39 T 13-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 Y11_42901 42cd4a345a0855f04f907e25e2021dce 338 Gene3D G3DSA:1.10.260.40 4 111 3.7E-20 T 13-10-2018 Y11_42901 42cd4a345a0855f04f907e25e2021dce 338 Pfam PF13413 Helix-turn-helix domain 18 79 3.6E-15 T 13-10-2018 Y11_42901 42cd4a345a0855f04f907e25e2021dce 338 SUPERFAMILY SSF47413 12 80 2.04E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_42901 42cd4a345a0855f04f907e25e2021dce 338 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 338 44.505 T 13-10-2018 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 Y11_42901 42cd4a345a0855f04f907e25e2021dce 338 SMART SM00530 18 79 3.3E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_42901 42cd4a345a0855f04f907e25e2021dce 338 Pfam PF13464 Domain of unknown function (DUF4115) 261 335 8.2E-25 T 13-10-2018 IPR025194 Domain of unknown function DUF4115 Y11_01281 d97289c5c4865de98eca863dbaec5009 42 Gene3D G3DSA:3.30.160.390 1 39 3.0E-9 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Y11_19641 2075a34cfdadc4816e65d65a0b57a2dc 283 Gene3D G3DSA:3.30.160.390 1 88 4.8E-32 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Y11_19641 2075a34cfdadc4816e65d65a0b57a2dc 283 Pfam PF00589 Phage integrase family 210 276 6.8E-6 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Y11_19641 2075a34cfdadc4816e65d65a0b57a2dc 283 Pfam PF13356 Arm DNA-binding domain 3 87 1.6E-19 T 13-10-2018 IPR025166 Integrase, DNA-binding domain Y11_19641 2075a34cfdadc4816e65d65a0b57a2dc 283 SUPERFAMILY SSF56349 98 275 3.77E-31 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Y11_19641 2075a34cfdadc4816e65d65a0b57a2dc 283 Gene3D G3DSA:1.10.150.130 90 206 6.6E-31 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Y11_40191 ca9078e90f05bb9a6619b6942bebf286 71 SUPERFAMILY SSF140931 6 64 3.79E-5 T 13-10-2018 IPR036597 Fido-like domain superfamily Y11_40191 ca9078e90f05bb9a6619b6942bebf286 71 Gene3D G3DSA:1.10.3290.10 1 71 1.1E-8 T 13-10-2018 IPR036597 Fido-like domain superfamily Y11_33221 6ff6b73f5195134351c0528283844b55 315 SUPERFAMILY SSF53328 5 207 1.96E-65 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Y11_33221 6ff6b73f5195134351c0528283844b55 315 Pfam PF00551 Formyl transferase 6 181 4.9E-50 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Y11_33221 6ff6b73f5195134351c0528283844b55 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 9.6E-114 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Y11_33221 6ff6b73f5195134351c0528283844b55 315 Gene3D G3DSA:3.40.50.170 1 209 4.3E-88 T 13-10-2018 Y11_33221 6ff6b73f5195134351c0528283844b55 315 Gene3D G3DSA:3.10.25.10 210 315 2.5E-39 T 13-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Y11_33221 6ff6b73f5195134351c0528283844b55 315 SUPERFAMILY SSF50486 208 309 9.61E-37 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Y11_33221 6ff6b73f5195134351c0528283844b55 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Y11_33221 6ff6b73f5195134351c0528283844b55 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 3.2E-31 T 13-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Y11_33221 6ff6b73f5195134351c0528283844b55 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 36.595 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Y11_24701 4ef9381ec948bac28230ccc3287011d4 457 SUPERFAMILY SSF53300 160 442 9.71E-14 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Y11_24701 4ef9381ec948bac28230ccc3287011d4 457 Pfam PF00092 von Willebrand factor type A domain 305 435 4.1E-6 T 13-10-2018 IPR002035 von Willebrand factor, type A Y11_10441 e0b0d6cb24b7a906b36f4651b780772e 82 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 77 4.7E-25 T 13-10-2018 IPR018680 Protein of unknown function DUF2164 Y11_16801 b8eb219c8c85cea8a365fae845e917be 478 Pfam PF05598 Transposase domain (DUF772) 52 127 3.7E-23 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Y11_16801 b8eb219c8c85cea8a365fae845e917be 478 Pfam PF13751 Transposase DDE domain 328 446 1.3E-26 T 13-10-2018 IPR025668 Transposase DDE domain Y11_07061 b8eb219c8c85cea8a365fae845e917be 478 Pfam PF05598 Transposase domain (DUF772) 52 127 3.7E-23 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Y11_07061 b8eb219c8c85cea8a365fae845e917be 478 Pfam PF13751 Transposase DDE domain 328 446 1.3E-26 T 13-10-2018 IPR025668 Transposase DDE domain Y11_39881 645f4f605ae9ac685588e7d8d3885e5c 404 SUPERFAMILY SSF51905 4 388 2.88E-59 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_39881 645f4f605ae9ac685588e7d8d3885e5c 404 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 13-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 Y11_39881 645f4f605ae9ac685588e7d8d3885e5c 404 Pfam PF01494 FAD binding domain 4 347 4.1E-28 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 Y11_39881 645f4f605ae9ac685588e7d8d3885e5c 404 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 394 7.7E-139 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Y11_39881 645f4f605ae9ac685588e7d8d3885e5c 404 Gene3D G3DSA:3.50.50.60 1 254 6.8E-82 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_39881 645f4f605ae9ac685588e7d8d3885e5c 404 Gene3D G3DSA:3.50.50.60 258 404 7.5E-50 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Y11_39881 645f4f605ae9ac685588e7d8d3885e5c 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 2.1E-18 T 13-10-2018 Y11_39881 645f4f605ae9ac685588e7d8d3885e5c 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 2.1E-18 T 13-10-2018 Y11_39881 645f4f605ae9ac685588e7d8d3885e5c 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 2.1E-18 T 13-10-2018 Y11_39881 645f4f605ae9ac685588e7d8d3885e5c 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.1E-18 T 13-10-2018 Y11_11771 d956cdaa1c65cf830cb0854c5ebde2f0 410 SMART SM00257 68 113 8.3E-5 T 13-10-2018 IPR018392 LysM domain Y11_11771 d956cdaa1c65cf830cb0854c5ebde2f0 410 Gene3D G3DSA:2.70.70.10 254 383 2.6E-49 T 13-10-2018 IPR011055 Duplicated hybrid motif Y11_11771 d956cdaa1c65cf830cb0854c5ebde2f0 410 Gene3D G3DSA:3.10.450.350 155 252 1.3E-30 T 13-10-2018 Y11_11771 d956cdaa1c65cf830cb0854c5ebde2f0 410 Gene3D G3DSA:3.10.450.350 56 154 3.6E-12 T 13-10-2018 Y11_11771 d956cdaa1c65cf830cb0854c5ebde2f0 410 Pfam PF01551 Peptidase family M23 283 377 3.5E-34 T 13-10-2018 IPR016047 Peptidase M23 Y11_11771 d956cdaa1c65cf830cb0854c5ebde2f0 410 Pfam PF04225 Opacity-associated protein A LysM-like domain 67 130 2.2E-6 T 13-10-2018 IPR007340 Opacity-associated protein A Y11_11771 d956cdaa1c65cf830cb0854c5ebde2f0 410 SUPERFAMILY SSF51261 135 378 2.46E-70 T 13-10-2018 IPR011055 Duplicated hybrid motif Y11_20571 7fa7a812446c80f3e6642d6d6ec3fbb8 110 Pfam PF01722 BolA-like protein 12 85 9.9E-30 T 13-10-2018 IPR002634 BolA protein Y11_20571 7fa7a812446c80f3e6642d6d6ec3fbb8 110 SUPERFAMILY SSF82657 3 89 1.7E-30 T 13-10-2018 IPR036065 BolA-like superfamily Y11_20571 7fa7a812446c80f3e6642d6d6ec3fbb8 110 Gene3D G3DSA:3.30.300.90 2 91 8.0E-36 T 13-10-2018 Y11_20571 7fa7a812446c80f3e6642d6d6ec3fbb8 110 PIRSF PIRSF003113 1 101 3.0E-33 T 13-10-2018 IPR002634 BolA protein Y11_31211 a1ed9726c95453e35c58aefcdda0c180 767 Pfam PF03170 Bacterial cellulose synthase subunit 60 667 1.6E-220 T 13-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 Y11_31211 a1ed9726c95453e35c58aefcdda0c180 767 Gene3D G3DSA:2.60.120.260 349 508 2.7E-25 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Y11_31211 a1ed9726c95453e35c58aefcdda0c180 767 PRINTS PR01440 Cellulose synthase subunit B signature 300 321 4.6E-33 T 13-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Y11_31211 a1ed9726c95453e35c58aefcdda0c180 767 PRINTS PR01440 Cellulose synthase subunit B signature 383 404 4.6E-33 T 13-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Y11_31211 a1ed9726c95453e35c58aefcdda0c180 767 PRINTS PR01440 Cellulose synthase subunit B signature 219 242 4.6E-33 T 13-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Y11_31211 a1ed9726c95453e35c58aefcdda0c180 767 PRINTS PR01440 Cellulose synthase subunit B signature 516 535 4.6E-33 T 13-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Y11_31211 a1ed9726c95453e35c58aefcdda0c180 767 PRINTS PR01440 Cellulose synthase subunit B signature 87 108 4.6E-33 T 13-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Y11_31211 a1ed9726c95453e35c58aefcdda0c180 767 PRINTS PR01440 Cellulose synthase subunit B signature 706 726 4.6E-33 T 13-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Y11_31211 a1ed9726c95453e35c58aefcdda0c180 767 PRINTS PR01440 Cellulose synthase subunit B signature 136 159 4.6E-33 T 13-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Y11_31211 a1ed9726c95453e35c58aefcdda0c180 767 PRINTS PR01440 Cellulose synthase subunit B signature 553 573 4.6E-33 T 13-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Y11_31211 a1ed9726c95453e35c58aefcdda0c180 767 PRINTS PR01440 Cellulose synthase subunit B signature 177 198 4.6E-33 T 13-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Y11_31211 a1ed9726c95453e35c58aefcdda0c180 767 Gene3D G3DSA:2.60.120.260 59 190 5.1E-27 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Y11_05661 934334e285ebc064a92708c8ae785acc 148 Pfam PF00293 NUDIX domain 4 115 6.6E-17 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Y11_05661 934334e285ebc064a92708c8ae785acc 148 PRINTS PR00502 NUDIX hydrolase family signature 45 60 2.7E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Y11_05661 934334e285ebc064a92708c8ae785acc 148 PRINTS PR00502 NUDIX hydrolase family signature 31 45 2.7E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Y11_05661 934334e285ebc064a92708c8ae785acc 148 Gene3D G3DSA:3.90.79.10 1 148 8.1E-45 T 13-10-2018 Y11_05661 934334e285ebc064a92708c8ae785acc 148 SUPERFAMILY SSF55811 2 131 1.76E-30 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Y11_05661 934334e285ebc064a92708c8ae785acc 148 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Y11_06731 945e03542d19b5980d75fa5d836e3215 452 Pfam PF03390 2-hydroxycarboxylate transporter family 37 445 4.5E-147 T 13-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 Y11_06731 945e03542d19b5980d75fa5d836e3215 452 PIRSF PIRSF005348 14 452 3.3E-158 T 13-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 Y11_41041 df5aa52b71d4e9b7daa525b6afdbe6c5 248 SUPERFAMILY SSF53633 7 240 2.75E-73 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Y11_41041 df5aa52b71d4e9b7daa525b6afdbe6c5 248 Gene3D G3DSA:3.40.1160.10 3 247 3.9E-76 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Y11_41041 df5aa52b71d4e9b7daa525b6afdbe6c5 248 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.145 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Y11_41041 df5aa52b71d4e9b7daa525b6afdbe6c5 248 PIRSF PIRSF005650 4 248 7.8E-91 T 13-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Y11_41041 df5aa52b71d4e9b7daa525b6afdbe6c5 248 Pfam PF00696 Amino acid kinase family 11 219 9.0E-28 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Y11_41041 df5aa52b71d4e9b7daa525b6afdbe6c5 248 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 5.4E-104 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Y11_11981 0142a2f0c07df60360d5136c72923f8a 157 SUPERFAMILY SSF52728 3 156 2.09E-51 T 13-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 Y11_11981 0142a2f0c07df60360d5136c72923f8a 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 9.3E-50 T 13-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 Y11_11981 0142a2f0c07df60360d5136c72923f8a 157 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 152 1.5E-69 T 13-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 Y11_11981 0142a2f0c07df60360d5136c72923f8a 157 Gene3D G3DSA:3.40.35.10 1 156 4.4E-53 T 13-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 Y11_06621 69e1674c1783231ccdd3836196d0f6ac 233 SUPERFAMILY SSF46894 140 210 4.08E-12 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Y11_06621 69e1674c1783231ccdd3836196d0f6ac 233 Gene3D G3DSA:1.10.10.10 152 215 2.5E-10 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_06621 69e1674c1783231ccdd3836196d0f6ac 233 SMART SM00421 155 212 4.6E-4 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_06621 69e1674c1783231ccdd3836196d0f6ac 233 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 206 4.0E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Y11_06621 69e1674c1783231ccdd3836196d0f6ac 233 Pfam PF08448 PAS fold 31 130 1.0E-6 T 13-10-2018 IPR013656 PAS fold-4 Y11_16071 2add348c1f110eedc7836a8a3429c758 200 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 185 2.2E-29 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Y11_16071 2add348c1f110eedc7836a8a3429c758 200 SUPERFAMILY SSF53790 1 198 7.72E-42 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Y11_16071 2add348c1f110eedc7836a8a3429c758 200 Gene3D G3DSA:3.40.1010.10 1 101 6.0E-24 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Y11_16071 2add348c1f110eedc7836a8a3429c758 200 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 4 195 8.4E-58 T 13-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 Y11_18311 4cf0d188196530f2fd07be47f8ef5c1b 338 SUPERFAMILY SSF51735 1 336 2.24E-101 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_18311 4cf0d188196530f2fd07be47f8ef5c1b 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 335 1.4E-144 T 13-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Y11_18311 4cf0d188196530f2fd07be47f8ef5c1b 338 Gene3D G3DSA:3.40.50.720 3 262 3.2E-143 T 13-10-2018 Y11_18311 4cf0d188196530f2fd07be47f8ef5c1b 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 4.5E-66 T 13-10-2018 IPR016040 NAD(P)-binding domain Y11_18311 4cf0d188196530f2fd07be47f8ef5c1b 338 Gene3D G3DSA:3.90.25.10 182 328 3.2E-143 T 13-10-2018 Y11_29101 acb43c2c62dbaf1d11447cd10c0a51fb 286 Pfam PF00378 Enoyl-CoA hydratase/isomerase 68 205 9.2E-16 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Y11_29101 acb43c2c62dbaf1d11447cd10c0a51fb 286 Gene3D G3DSA:3.90.226.10 1 224 9.6E-81 T 13-10-2018 Y11_29101 acb43c2c62dbaf1d11447cd10c0a51fb 286 SUPERFAMILY SSF52096 25 253 5.22E-32 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Y11_24741 4c9752c9b7caba7a9c8d71139c09bb6f 220 Pfam PF09335 SNARE associated Golgi protein 48 172 3.9E-17 T 13-10-2018 IPR032816 SNARE associated Golgi protein Y11_14391 41769b2fd31a97f8dd8426eea0566aba 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 4.1E-119 T 13-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 Y11_14391 41769b2fd31a97f8dd8426eea0566aba 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 5.0E-30 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Y11_14391 41769b2fd31a97f8dd8426eea0566aba 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 1.7E-48 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Y11_14391 41769b2fd31a97f8dd8426eea0566aba 260 SUPERFAMILY SSF117143 94 222 1.12E-35 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Y11_14391 41769b2fd31a97f8dd8426eea0566aba 260 Pfam PF00460 Flagella basal body rod protein 5 35 8.8E-14 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Y11_14391 41769b2fd31a97f8dd8426eea0566aba 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Y11_14391 41769b2fd31a97f8dd8426eea0566aba 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 1.1E-26 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Y11_06721 3acaa115cb5e27db9c5cfc17400f1c3a 488 Pfam PF00324 Amino acid permease 36 473 6.2E-119 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Y11_06721 3acaa115cb5e27db9c5cfc17400f1c3a 488 PIRSF PIRSF006060 22 486 1.6E-63 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_06721 3acaa115cb5e27db9c5cfc17400f1c3a 488 ProSitePatterns PS00218 Amino acid permeases signature. 61 91 - T 13-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 Y11_06721 3acaa115cb5e27db9c5cfc17400f1c3a 488 Gene3D G3DSA:1.20.1740.10 28 484 1.3E-62 T 13-10-2018 Y11_18801 22035644c5d7f335f9310bb95aa15b5c 562 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 558 35.319 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Y11_18801 22035644c5d7f335f9310bb95aa15b5c 562 Pfam PF03814 Potassium-transporting ATPase A subunit 12 556 6.0E-241 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Y11_18801 22035644c5d7f335f9310bb95aa15b5c 562 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 557 3.7E-262 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Y11_18801 22035644c5d7f335f9310bb95aa15b5c 562 PIRSF PIRSF001294 1 560 2.5E-239 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Y11_38731 cb3eae75d90236990ef161f9175e1502 241 Pfam PF13988 Protein of unknown function (DUF4225) 51 211 4.2E-49 T 13-10-2018 IPR025320 Protein of unknown function DUF4225 Y11_03211 4e8566533882965aa5cc77c45089cad1 302 SUPERFAMILY SSF48695 1 106 2.3E-27 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Y11_03211 4e8566533882965aa5cc77c45089cad1 302 Gene3D G3DSA:1.10.3820.10 1 108 8.3E-14 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily Y11_03211 4e8566533882965aa5cc77c45089cad1 302 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 1 102 4.4E-36 T 13-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal Y11_21181 806b7da8364c7fb1cd4ddee117069ea8 164 Pfam PF00583 Acetyltransferase (GNAT) family 56 147 5.4E-12 T 13-10-2018 IPR000182 GNAT domain Y11_21181 806b7da8364c7fb1cd4ddee117069ea8 164 Gene3D G3DSA:3.40.630.30 1 158 2.7E-35 T 13-10-2018 Y11_21181 806b7da8364c7fb1cd4ddee117069ea8 164 SUPERFAMILY SSF55729 1 152 6.15E-23 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_08151 cc9fd0f2a31fd00d6316ebfcf6769ec6 367 Pfam PF01594 AI-2E family transporter 17 346 8.3E-50 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like Y11_15221 2ad712f07d95529b9af8e6e21182fb54 232 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_15221 2ad712f07d95529b9af8e6e21182fb54 232 Pfam PF00849 RNA pseudouridylate synthase 25 181 1.2E-25 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_15221 2ad712f07d95529b9af8e6e21182fb54 232 Gene3D G3DSA:3.30.2350.10 10 230 3.0E-61 T 13-10-2018 Y11_15221 2ad712f07d95529b9af8e6e21182fb54 232 SUPERFAMILY SSF55120 13 227 9.76E-57 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Y11_11691 e15f9aa0ad704b3c9a984785d0651525 126 SUPERFAMILY SSF103481 7 108 1.07E-16 T 13-10-2018 Y11_11691 e15f9aa0ad704b3c9a984785d0651525 126 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 2 126 32.717 T 13-10-2018 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 Y11_11691 e15f9aa0ad704b3c9a984785d0651525 126 Pfam PF00893 Small Multidrug Resistance protein 4 94 2.8E-23 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Y11_11691 e15f9aa0ad704b3c9a984785d0651525 126 Gene3D G3DSA:1.10.3730.20 2 110 2.1E-29 T 13-10-2018 Y11_33601 9158feaa2bb6524960ea150ef3c76093 93 Gene3D G3DSA:3.10.50.40 2 93 2.3E-37 T 13-10-2018 Y11_33601 9158feaa2bb6524960ea150ef3c76093 93 Pfam PF13616 PPIC-type PPIASE domain 15 90 1.1E-24 T 13-10-2018 Y11_33601 9158feaa2bb6524960ea150ef3c76093 93 SUPERFAMILY SSF54534 4 90 2.68E-30 T 13-10-2018 Y11_21591 45afeab73962410b2b5a9145a190a090 180 Pfam PF03079 ARD/ARD' family 5 165 5.2E-33 T 13-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 Y11_21591 45afeab73962410b2b5a9145a190a090 180 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 37.788 T 13-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 Y11_21591 45afeab73962410b2b5a9145a190a090 180 SUPERFAMILY SSF51182 1 179 3.43E-42 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_21591 45afeab73962410b2b5a9145a190a090 180 Gene3D G3DSA:2.60.120.10 2 157 3.8E-55 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_30311 ef07dc17fd74330b4df25f45650cafeb 190 SUPERFAMILY SSF48150 4 186 1.33E-81 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Y11_30311 ef07dc17fd74330b4df25f45650cafeb 190 Gene3D G3DSA:1.10.340.30 3 189 1.8E-87 T 13-10-2018 Y11_30311 ef07dc17fd74330b4df25f45650cafeb 190 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 4 183 2.3E-84 T 13-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 Y11_30311 ef07dc17fd74330b4df25f45650cafeb 190 Pfam PF03352 Methyladenine glycosylase 8 184 6.0E-80 T 13-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 Y11_p0251 78c622cc232b9090375443104f3e4c9b 283 Pfam PF01526 Tn3 transposase DDE domain 129 255 2.3E-48 T 13-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 Y11_p0251 78c622cc232b9090375443104f3e4c9b 283 Pfam PF13700 Domain of unknown function (DUF4158) 6 130 2.7E-35 T 13-10-2018 IPR025296 Domain of unknown function DUF4158 Y11_13171 892afd67518b637b79b3f84d217f78a2 90 Pfam PF10809 Protein of unknown function (DUF2732) 29 86 1.4E-16 T 13-10-2018 IPR020126 Protein of unknown function DUF2732 Y11_13171 892afd67518b637b79b3f84d217f78a2 90 ProDom PD057914 C0939 STY4639 GPA GP33 PRECURSOR FELS-2 5'REGION STY3665 SIGNAL PHAGE-RELATED 29 90 4.0E-26 T 13-10-2018 IPR020126 Protein of unknown function DUF2732 Y11_31221 11bdd602c056cdc92ba411d089fb8ed7 375 Gene3D G3DSA:1.50.10.10 23 367 6.0E-140 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Y11_31221 11bdd602c056cdc92ba411d089fb8ed7 375 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 115 133 - T 13-10-2018 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Y11_31221 11bdd602c056cdc92ba411d089fb8ed7 375 PRINTS PR00735 Glycosyl hydrolase family 8 signature 216 227 1.1E-20 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Y11_31221 11bdd602c056cdc92ba411d089fb8ed7 375 PRINTS PR00735 Glycosyl hydrolase family 8 signature 241 250 1.1E-20 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Y11_31221 11bdd602c056cdc92ba411d089fb8ed7 375 PRINTS PR00735 Glycosyl hydrolase family 8 signature 338 352 1.1E-20 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Y11_31221 11bdd602c056cdc92ba411d089fb8ed7 375 PRINTS PR00735 Glycosyl hydrolase family 8 signature 115 133 1.1E-20 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Y11_31221 11bdd602c056cdc92ba411d089fb8ed7 375 PRINTS PR00735 Glycosyl hydrolase family 8 signature 53 66 1.1E-20 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Y11_31221 11bdd602c056cdc92ba411d089fb8ed7 375 PRINTS PR00735 Glycosyl hydrolase family 8 signature 180 197 1.1E-20 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Y11_31221 11bdd602c056cdc92ba411d089fb8ed7 375 Pfam PF01270 Glycosyl hydrolases family 8 10 353 3.4E-95 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Y11_31221 11bdd602c056cdc92ba411d089fb8ed7 375 SUPERFAMILY SSF48208 3 357 1.97E-105 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Y11_35461 dc45a0ce706d4a5f553755291722a17c 89 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 6 84 2.7E-32 T 13-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 Y11_35461 dc45a0ce706d4a5f553755291722a17c 89 PIRSF PIRSF004669 1 89 1.0E-26 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Y11_35461 dc45a0ce706d4a5f553755291722a17c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.6E-25 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Y11_35461 dc45a0ce706d4a5f553755291722a17c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.6E-25 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Y11_35461 dc45a0ce706d4a5f553755291722a17c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.6E-25 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Y11_35461 dc45a0ce706d4a5f553755291722a17c 89 Pfam PF01313 Bacterial export proteins, family 3 6 78 8.7E-27 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Y11_29641 6487a372c4253ba6f735543c4c295fae 146 PRINTS PR00369 Flavodoxin signature 51 62 8.9E-8 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Y11_29641 6487a372c4253ba6f735543c4c295fae 146 PRINTS PR00369 Flavodoxin signature 5 18 8.9E-8 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Y11_29641 6487a372c4253ba6f735543c4c295fae 146 PRINTS PR00369 Flavodoxin signature 106 125 8.9E-8 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Y11_29641 6487a372c4253ba6f735543c4c295fae 146 PRINTS PR00369 Flavodoxin signature 82 92 8.9E-8 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Y11_29641 6487a372c4253ba6f735543c4c295fae 146 Gene3D G3DSA:3.40.50.360 1 146 7.9E-50 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_29641 6487a372c4253ba6f735543c4c295fae 146 SUPERFAMILY SSF52218 1 146 4.89E-40 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_29641 6487a372c4253ba6f735543c4c295fae 146 Pfam PF00258 Flavodoxin 7 138 4.0E-26 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Y11_07551 5f1450ae6c1ce2bd5e5316720963ba3e 305 Gene3D G3DSA:1.10.3720.10 23 296 6.9E-63 T 13-10-2018 IPR035906 MetI-like superfamily Y11_07551 5f1450ae6c1ce2bd5e5316720963ba3e 305 SUPERFAMILY SSF161098 29 305 1.83E-70 T 13-10-2018 IPR035906 MetI-like superfamily Y11_07551 5f1450ae6c1ce2bd5e5316720963ba3e 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 299 1.8E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_30201 e19768493dbc54d6e1a1aaf343eafe7d 224 Pfam PF01548 Transposase 16 156 1.6E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_18541 5dcbea680996d7f79a129ed7fa3c38ed 379 PIRSF PIRSF000267 2 378 1.1E-128 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Y11_18541 5dcbea680996d7f79a129ed7fa3c38ed 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 9.8E-190 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Y11_18541 5dcbea680996d7f79a129ed7fa3c38ed 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 1.1E-109 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Y11_06021 e9741266ca29b8b2e192ffc1e1b7700a 282 Pfam PF01163 RIO1 family 31 219 6.8E-43 T 13-10-2018 Y11_06021 e9741266ca29b8b2e192ffc1e1b7700a 282 Gene3D G3DSA:3.30.200.20 16 126 6.6E-5 T 13-10-2018 Y11_06021 e9741266ca29b8b2e192ffc1e1b7700a 282 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 13-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 Y11_06021 e9741266ca29b8b2e192ffc1e1b7700a 282 SUPERFAMILY SSF56112 18 223 2.24E-21 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Y11_06021 e9741266ca29b8b2e192ffc1e1b7700a 282 SMART SM00090 5 228 4.4E-15 T 13-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 Y11_06021 e9741266ca29b8b2e192ffc1e1b7700a 282 Gene3D G3DSA:1.10.510.10 135 221 9.8E-19 T 13-10-2018 Y11_08031 23bc30fea8617a9699c86532137ecd39 68 Pfam PF00892 EamA-like transporter family 3 66 3.2E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_08031 23bc30fea8617a9699c86532137ecd39 68 SUPERFAMILY SSF103481 2 67 2.48E-13 T 13-10-2018 Y11_08031 23bc30fea8617a9699c86532137ecd39 68 Gene3D G3DSA:1.10.3730.20 1 67 4.7E-7 T 13-10-2018 Y11_13641 65175c1b1f45642f0a364d8ee63069ad 90 Pfam PF01527 Transposase 2 71 2.5E-20 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Y11_13641 65175c1b1f45642f0a364d8ee63069ad 90 SUPERFAMILY SSF46689 1 67 6.63E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_04331 a1cecb619d3817b977b3e320eafebd47 255 Pfam PF02698 DUF218 domain 80 242 5.8E-26 T 13-10-2018 IPR003848 Domain of unknown function DUF218 Y11_11941 90976c65a6b10286a99c2f1e396f3b8a 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.1E-165 T 13-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like Y11_11941 90976c65a6b10286a99c2f1e396f3b8a 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 322 54.526 T 13-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 Y11_11941 90976c65a6b10286a99c2f1e396f3b8a 323 SUPERFAMILY SSF53335 91 323 6.51E-34 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_11941 90976c65a6b10286a99c2f1e396f3b8a 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 8 321 2.0E-146 T 13-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 Y11_11941 90976c65a6b10286a99c2f1e396f3b8a 323 Gene3D G3DSA:3.40.50.150 90 323 2.1E-21 T 13-10-2018 Y11_11641 e7a602163fe3cb5e23175196f7e8b5fb 201 PIRSF PIRSF004982 17 197 2.2E-49 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Y11_11641 e7a602163fe3cb5e23175196f7e8b5fb 201 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 27 196 2.0E-63 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Y11_11641 e7a602163fe3cb5e23175196f7e8b5fb 201 Pfam PF03843 Outer membrane lipoprotein Slp family 30 177 6.5E-48 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Y11_15921 9c4a206ce33fdce65a20dc9d03cc1862 248 Pfam PF02654 Cobalamin-5-phosphate synthase 10 245 4.4E-50 T 13-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Y11_15921 9c4a206ce33fdce65a20dc9d03cc1862 248 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 5 247 1.1E-60 T 13-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Y11_15921 9c4a206ce33fdce65a20dc9d03cc1862 248 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 248 44.349 T 13-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Y11_11681 9e4eeb9e8dd76e4e9df26a2d12684681 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 30.2 T 13-10-2018 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 Y11_11681 9e4eeb9e8dd76e4e9df26a2d12684681 109 Gene3D G3DSA:1.10.3730.20 7 109 8.0E-28 T 13-10-2018 Y11_11681 9e4eeb9e8dd76e4e9df26a2d12684681 109 Pfam PF00893 Small Multidrug Resistance protein 10 99 8.2E-27 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Y11_11681 9e4eeb9e8dd76e4e9df26a2d12684681 109 SUPERFAMILY SSF103481 11 108 1.15E-17 T 13-10-2018 Y11_10131 782c9d6804b27791b06e4a1520f0d86a 392 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 206 357 4.7E-16 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Y11_10131 782c9d6804b27791b06e4a1520f0d86a 392 PIRSF PIRSF029347 1 392 4.7E-136 T 13-10-2018 IPR014555 RecF-like Y11_10131 782c9d6804b27791b06e4a1520f0d86a 392 Gene3D G3DSA:3.40.50.300 1 102 2.9E-10 T 13-10-2018 Y11_10131 782c9d6804b27791b06e4a1520f0d86a 392 Pfam PF13175 AAA ATPase domain 1 46 1.7E-8 T 13-10-2018 Y11_10131 782c9d6804b27791b06e4a1520f0d86a 392 Gene3D G3DSA:3.40.50.300 230 380 5.0E-10 T 13-10-2018 Y11_10131 782c9d6804b27791b06e4a1520f0d86a 392 SUPERFAMILY SSF52540 1 372 9.34E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_37591 5ec8af82fcdcfe7b654e0fbb93424bda 344 SUPERFAMILY SSF53822 31 344 3.77E-83 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_37591 5ec8af82fcdcfe7b654e0fbb93424bda 344 Gene3D G3DSA:3.40.50.2300 34 304 1.8E-110 T 13-10-2018 Y11_37591 5ec8af82fcdcfe7b654e0fbb93424bda 344 Pfam PF13407 Periplasmic binding protein domain 34 289 3.4E-54 T 13-10-2018 IPR025997 Periplasmic binding protein Y11_37591 5ec8af82fcdcfe7b654e0fbb93424bda 344 Gene3D G3DSA:3.40.50.2300 134 270 1.8E-110 T 13-10-2018 Y11_18031 ac40b2e6ee36fc671b50a6fea43eebc8 396 Pfam PF12698 ABC-2 family transporter protein 49 388 7.6E-44 T 13-10-2018 Y11_14191 118b90fc54210cd23670d6020f90000b 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 3 102 2.4E-26 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Y11_14191 118b90fc54210cd23670d6020f90000b 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 103 18.077 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Y11_14191 118b90fc54210cd23670d6020f90000b 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 5.7E-17 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Y11_14191 118b90fc54210cd23670d6020f90000b 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 5.7E-17 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Y11_14191 118b90fc54210cd23670d6020f90000b 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 5.7E-17 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Y11_14191 118b90fc54210cd23670d6020f90000b 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 19 103 4.2E-27 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Y11_02921 2cee65ebb5a606d198905ef389822731 400 Pfam PF00872 Transposase, Mutator family 10 373 1.5E-102 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Y11_42571 8691a521d77da162339f5b575e823cbe 117 Pfam PF10941 Protein of unknown function DUF2620 2 116 2.3E-48 T 13-10-2018 IPR021238 Protein of unknown function DUF2620 Y11_26821 d98388399a2fe29398be4297534aa75c 136 Pfam PF14760 Rnk N-terminus 4 43 2.0E-12 T 13-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain Y11_26821 d98388399a2fe29398be4297534aa75c 136 PIRSF PIRSF006092 28 128 1.4E-22 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Y11_26821 d98388399a2fe29398be4297534aa75c 136 Gene3D G3DSA:1.10.286.20 1 44 1.0E-25 T 13-10-2018 Y11_26821 d98388399a2fe29398be4297534aa75c 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 123 5.7E-17 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Y11_26821 d98388399a2fe29398be4297534aa75c 136 Gene3D G3DSA:3.10.50.30 46 136 6.6E-30 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Y11_26821 d98388399a2fe29398be4297534aa75c 136 SUPERFAMILY SSF54534 49 126 1.29E-17 T 13-10-2018 Y11_26821 d98388399a2fe29398be4297534aa75c 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.026 T 13-10-2018 IPR028625 Regulator of nucleoside diphosphate kinase GO:0070063 Y11_21451 444381ae3916017fd0badde45cab5a16 413 Pfam PF03116 NQR2, RnfD, RnfE family 43 405 2.8E-106 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 Y11_21451 444381ae3916017fd0badde45cab5a16 413 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.277 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 Y11_21451 444381ae3916017fd0badde45cab5a16 413 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 1.3E-191 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 Y11_21451 444381ae3916017fd0badde45cab5a16 413 PIRSF PIRSF016055 1 413 1.5E-195 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 Y11_01461 b613862d4faa2e38613eb4793dde2bbf 176 SMART SM00463 95 173 7.5E-20 T 13-10-2018 IPR002625 Smr domain Y11_01461 b613862d4faa2e38613eb4793dde2bbf 176 Pfam PF01713 Smr domain 98 172 2.6E-19 T 13-10-2018 IPR002625 Smr domain Y11_01461 b613862d4faa2e38613eb4793dde2bbf 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 40.209 T 13-10-2018 IPR022990 Uncharacterised protein family UPF0115 Y11_01461 b613862d4faa2e38613eb4793dde2bbf 176 SUPERFAMILY SSF160443 96 171 1.96E-10 T 13-10-2018 IPR036063 Smr domain superfamily Y11_01461 b613862d4faa2e38613eb4793dde2bbf 176 Gene3D G3DSA:3.30.1370.110 50 176 1.1E-30 T 13-10-2018 Y11_36271 0a784ffdf5113f66e902cce07d92495a 130 Gene3D G3DSA:3.30.70.60 1 92 8.1E-33 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Y11_36271 0a784ffdf5113f66e902cce07d92495a 130 SUPERFAMILY SSF54995 1 103 1.83E-37 T 13-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36271 0a784ffdf5113f66e902cce07d92495a 130 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 1.0E-37 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36271 0a784ffdf5113f66e902cce07d92495a 130 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.959 T 13-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Y11_36271 0a784ffdf5113f66e902cce07d92495a 130 Pfam PF01250 Ribosomal protein S6 3 91 9.4E-28 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_36271 0a784ffdf5113f66e902cce07d92495a 130 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 13-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 Y11_04841 c466a4ba314c0bad884158ca154d62ff 629 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 1.4E-75 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_04841 c466a4ba314c0bad884158ca154d62ff 629 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.4E-75 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_04841 c466a4ba314c0bad884158ca154d62ff 629 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 1.4E-75 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_04841 c466a4ba314c0bad884158ca154d62ff 629 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 1.4E-75 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_04841 c466a4ba314c0bad884158ca154d62ff 629 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 1.4E-75 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_04841 c466a4ba314c0bad884158ca154d62ff 629 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.4E-75 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_04841 c466a4ba314c0bad884158ca154d62ff 629 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 1.4E-75 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_04841 c466a4ba314c0bad884158ca154d62ff 629 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 1.4E-75 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_04841 c466a4ba314c0bad884158ca154d62ff 629 Pfam PF01578 Cytochrome C assembly protein 89 295 1.1E-48 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Y11_04841 c466a4ba314c0bad884158ca154d62ff 629 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 617 7.1E-74 T 13-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal Y11_04841 c466a4ba314c0bad884158ca154d62ff 629 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 54 618 5.1E-203 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_04841 c466a4ba314c0bad884158ca154d62ff 629 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 6.0E-18 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_04841 c466a4ba314c0bad884158ca154d62ff 629 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 6.0E-18 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_04841 c466a4ba314c0bad884158ca154d62ff 629 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 6.0E-18 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_04841 c466a4ba314c0bad884158ca154d62ff 629 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 6.0E-18 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_04841 c466a4ba314c0bad884158ca154d62ff 629 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 6.0E-18 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_16831 9519da3b0ef85ff810c17d843d219c7a 615 Pfam PF13502 AsmA-like C-terminal region 356 545 1.0E-19 T 13-10-2018 IPR032712 AsmA-like, C-terminal Y11_16831 9519da3b0ef85ff810c17d843d219c7a 615 Pfam PF05170 AsmA family 3 270 1.8E-22 T 13-10-2018 IPR007844 AsmA Y11_21531 be1e4cad7bf61b4b7f555baab386c1aa 503 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 25 5.4E-5 T 13-10-2018 IPR024973 ESPR domain Y11_21531 be1e4cad7bf61b4b7f555baab386c1aa 503 Gene3D G3DSA:2.160.20.10 74 472 6.0E-95 T 13-10-2018 IPR012334 Pectin lyase fold Y11_21531 be1e4cad7bf61b4b7f555baab386c1aa 503 SUPERFAMILY SSF51126 73 363 2.76E-48 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor Y11_21531 be1e4cad7bf61b4b7f555baab386c1aa 503 Pfam PF05860 haemagglutination activity domain 78 180 4.7E-25 T 13-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal Y11_21531 be1e4cad7bf61b4b7f555baab386c1aa 503 SMART SM00912 70 182 4.8E-40 T 13-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal Y11_21531 be1e4cad7bf61b4b7f555baab386c1aa 503 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 104 177 3.5E-26 T 13-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal Y11_28791 7a21f6254473d9fd2ff1c4f3f25a55ec 82 Gene3D G3DSA:3.40.30.10 1 82 7.4E-30 T 13-10-2018 Y11_28791 7a21f6254473d9fd2ff1c4f3f25a55ec 82 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Y11_28791 7a21f6254473d9fd2ff1c4f3f25a55ec 82 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 9.0E-37 T 13-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 Y11_28791 7a21f6254473d9fd2ff1c4f3f25a55ec 82 PRINTS PR00160 Glutaredoxin signature 4 22 8.7E-18 T 13-10-2018 IPR014025 Glutaredoxin subgroup Y11_28791 7a21f6254473d9fd2ff1c4f3f25a55ec 82 PRINTS PR00160 Glutaredoxin signature 60 73 8.7E-18 T 13-10-2018 IPR014025 Glutaredoxin subgroup Y11_28791 7a21f6254473d9fd2ff1c4f3f25a55ec 82 PRINTS PR00160 Glutaredoxin signature 46 59 8.7E-18 T 13-10-2018 IPR014025 Glutaredoxin subgroup Y11_28791 7a21f6254473d9fd2ff1c4f3f25a55ec 82 SUPERFAMILY SSF52833 1 82 4.5E-30 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_28791 7a21f6254473d9fd2ff1c4f3f25a55ec 82 Pfam PF00462 Glutaredoxin 4 63 1.0E-25 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Y11_31181 4e5d07b0d7bb4494dbbb44a3144ba190 63 Pfam PF10945 Cellulose biosynthesis protein BcsR 17 57 1.1E-22 T 13-10-2018 IPR024487 Protein YhjR Y11_31181 4e5d07b0d7bb4494dbbb44a3144ba190 63 ProDom PD053230 YHJR ECS4415 STY4179 CYTOPLASMIC 17 58 9.0E-9 T 13-10-2018 IPR024487 Protein YhjR Y11_14851 a02cbe3d7420034a359d9f1c3d1cfb63 152 Gene3D G3DSA:3.30.70.920 53 135 7.7E-18 T 13-10-2018 Y11_14851 a02cbe3d7420034a359d9f1c3d1cfb63 152 SMART SM00344 1 107 7.5E-25 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Y11_14851 a02cbe3d7420034a359d9f1c3d1cfb63 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.3E-11 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Y11_14851 a02cbe3d7420034a359d9f1c3d1cfb63 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.3E-11 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Y11_14851 a02cbe3d7420034a359d9f1c3d1cfb63 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.3E-11 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Y11_14851 a02cbe3d7420034a359d9f1c3d1cfb63 152 SUPERFAMILY SSF54909 62 135 1.56E-14 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Y11_14851 a02cbe3d7420034a359d9f1c3d1cfb63 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 1.5E-13 T 13-10-2018 Y11_14851 a02cbe3d7420034a359d9f1c3d1cfb63 152 Pfam PF01037 Lrp/AsnC ligand binding domain 67 132 3.9E-12 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Y11_14851 a02cbe3d7420034a359d9f1c3d1cfb63 152 SUPERFAMILY SSF46785 1 61 4.67E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_14851 a02cbe3d7420034a359d9f1c3d1cfb63 152 Gene3D G3DSA:1.10.10.10 1 52 2.8E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_20881 79dfe6cb5107edcc5af3261da3f0d79d 211 Pfam PF01548 Transposase 16 156 1.3E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_04131 79dfe6cb5107edcc5af3261da3f0d79d 211 Pfam PF01548 Transposase 16 156 1.3E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_26451 f5271976afb479d0f8e47a3994b7c355 328 SUPERFAMILY SSF53697 14 325 1.33E-66 T 13-10-2018 Y11_26451 f5271976afb479d0f8e47a3994b7c355 328 Gene3D G3DSA:3.40.50.10490 9 200 2.8E-65 T 13-10-2018 Y11_26451 f5271976afb479d0f8e47a3994b7c355 328 Pfam PF01380 SIS domain 47 177 6.7E-31 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_26451 f5271976afb479d0f8e47a3994b7c355 328 Pfam PF00571 CBS domain 206 261 1.4E-5 T 13-10-2018 IPR000644 CBS domain Y11_26451 f5271976afb479d0f8e47a3994b7c355 328 Pfam PF00571 CBS domain 274 325 3.6E-6 T 13-10-2018 IPR000644 CBS domain Y11_26451 f5271976afb479d0f8e47a3994b7c355 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 2.1E-124 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Y11_26451 f5271976afb479d0f8e47a3994b7c355 328 Gene3D G3DSA:3.10.580.10 201 325 1.6E-45 T 13-10-2018 Y11_26451 f5271976afb479d0f8e47a3994b7c355 328 PIRSF PIRSF004692 1 328 1.8E-134 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Y11_15681 5a56912a983810e6237803fc1bec872b 161 Pfam PF05638 Type VI secretion system effector, Hcp 6 136 1.2E-40 T 13-10-2018 IPR008514 Type VI secretion system effector, Hcp Y11_15681 5a56912a983810e6237803fc1bec872b 161 Gene3D G3DSA:2.30.110.20 4 161 7.4E-66 T 13-10-2018 IPR036624 Hcp1-like superfamily Y11_15681 5a56912a983810e6237803fc1bec872b 161 SUPERFAMILY SSF141452 3 159 1.44E-51 T 13-10-2018 IPR036624 Hcp1-like superfamily Y11_15681 5a56912a983810e6237803fc1bec872b 161 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 9 145 1.2E-20 T 13-10-2018 IPR008514 Type VI secretion system effector, Hcp Y11_32511 ab679931733d2afe9609d7a94e7a6453 503 Pfam PF05872 Bacterial protein of unknown function (DUF853) 7 503 1.1E-232 T 13-10-2018 IPR033186 Helicase HerA-like C-terminal Y11_32511 ab679931733d2afe9609d7a94e7a6453 503 SMART SM00382 23 330 0.0087 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_32511 ab679931733d2afe9609d7a94e7a6453 503 Gene3D G3DSA:3.40.50.300 8 145 4.9E-10 T 13-10-2018 Y11_32511 ab679931733d2afe9609d7a94e7a6453 503 SUPERFAMILY SSF52540 22 370 2.0E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_32511 ab679931733d2afe9609d7a94e7a6453 503 Gene3D G3DSA:3.40.50.300 200 376 1.4E-19 T 13-10-2018 Y11_04051 1a107365df5c309f50bb2826fd9272e0 397 Pfam PF00872 Transposase, Mutator family 10 370 1.7E-99 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Y11_14291 4bb97f252738c982f1adcb2387ec8634 188 Pfam PF04347 Flagellar biosynthesis protein, FliO 84 168 1.6E-20 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Y11_14291 4bb97f252738c982f1adcb2387ec8634 188 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 72 140 2.0E-20 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Y11_28691 021bfd29b34982f9ab06fb453b9f87d9 91 SUPERFAMILY SSF47413 1 51 4.5E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_28691 021bfd29b34982f9ab06fb453b9f87d9 91 Pfam PF01381 Helix-turn-helix 7 50 9.9E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_28691 021bfd29b34982f9ab06fb453b9f87d9 91 SMART SM00530 6 63 1.7E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_28691 021bfd29b34982f9ab06fb453b9f87d9 91 Gene3D G3DSA:1.10.260.40 1 91 8.4E-36 T 13-10-2018 Y11_29291 6d556f79fd083e981d210b62b5f02d94 307 SUPERFAMILY SSF54637 155 297 3.31E-43 T 13-10-2018 IPR029069 HotDog domain superfamily Y11_29291 6d556f79fd083e981d210b62b5f02d94 307 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 165 298 2.4E-49 T 13-10-2018 IPR012660 Thioesterase, putative Y11_29291 6d556f79fd083e981d210b62b5f02d94 307 SUPERFAMILY SSF55729 2 159 9.79E-28 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_29291 6d556f79fd083e981d210b62b5f02d94 307 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 297 5.6E-50 T 13-10-2018 IPR012660 Thioesterase, putative Y11_29291 6d556f79fd083e981d210b62b5f02d94 307 Pfam PF00583 Acetyltransferase (GNAT) family 25 122 1.6E-13 T 13-10-2018 IPR000182 GNAT domain Y11_29291 6d556f79fd083e981d210b62b5f02d94 307 Gene3D G3DSA:3.40.630.30 2 145 3.7E-26 T 13-10-2018 Y11_29291 6d556f79fd083e981d210b62b5f02d94 307 Gene3D G3DSA:3.10.129.10 147 299 6.9E-46 T 13-10-2018 Y11_23851 9e061df1664e9e0be4a26355804e437f 188 Gene3D G3DSA:2.60.40.3700 27 187 3.6E-62 T 13-10-2018 Y11_18891 3978e5e4a3b3720d721e41aafb607af9 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 7.0E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_18891 3978e5e4a3b3720d721e41aafb607af9 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 7.0E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_18891 3978e5e4a3b3720d721e41aafb607af9 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 7.0E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_18891 3978e5e4a3b3720d721e41aafb607af9 264 Pfam PF12697 Alpha/beta hydrolase family 19 246 5.7E-22 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_18891 3978e5e4a3b3720d721e41aafb607af9 264 SUPERFAMILY SSF53474 2 253 1.91E-52 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_18891 3978e5e4a3b3720d721e41aafb607af9 264 Gene3D G3DSA:3.40.50.1820 1 254 9.7E-75 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_10281 c6d9afa28c5e9d8e2eb59c13e56e4794 364 Pfam PF03116 NQR2, RnfD, RnfE family 16 358 3.3E-110 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 Y11_10281 c6d9afa28c5e9d8e2eb59c13e56e4794 364 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 19 359 4.0E-140 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Y11_10281 c6d9afa28c5e9d8e2eb59c13e56e4794 364 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 14 360 28.438 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Y11_06381 7e767107c3d7271754bf311fe437e447 85 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 46 6.0E-19 T 13-10-2018 IPR005371 Uncharacterised protein family UPF0181 Y11_06381 7e767107c3d7271754bf311fe437e447 85 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 59 19.896 T 13-10-2018 IPR005371 Uncharacterised protein family UPF0181 Y11_06381 7e767107c3d7271754bf311fe437e447 85 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 48 4.5E-27 T 13-10-2018 IPR005371 Uncharacterised protein family UPF0181 Y11_00331 4ddb87a27695a15ce995ae805fd4ec2f 92 PIRSF PIRSF037266 1 92 9.4E-41 T 13-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 Y11_00331 4ddb87a27695a15ce995ae805fd4ec2f 92 Pfam PF09904 Winged helix-turn helix 3 90 4.1E-39 T 13-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 Y11_00331 4ddb87a27695a15ce995ae805fd4ec2f 92 Gene3D G3DSA:1.10.10.10 2 92 1.3E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_27281 c4b2a46e9f8568faecdb7b9e772d66f2 156 Pfam PF05433 Glycine zipper 2TM domain 62 102 8.5E-6 T 13-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 Y11_06261 ac57ffecbb510920c1d6662f10d031be 189 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 184 25.991 T 13-10-2018 IPR022929 Putative manganese efflux pump MntP Y11_06261 ac57ffecbb510920c1d6662f10d031be 189 Pfam PF02659 Putative manganese efflux pump 31 181 7.5E-56 T 13-10-2018 IPR003810 Putative manganese efflux pump Y11_15621 3e17d5923a8c35d712aeb576bc92e5fb 86 Gene3D G3DSA:2.60.200.60 15 85 2.5E-12 T 13-10-2018 Y11_15621 3e17d5923a8c35d712aeb576bc92e5fb 86 Pfam PF05488 PAAR motif 14 75 9.4E-10 T 13-10-2018 IPR008727 PAAR motif Y11_15621 3e17d5923a8c35d712aeb576bc92e5fb 86 Pfam PF05488 PAAR motif 47 86 1.2E-6 T 13-10-2018 IPR008727 PAAR motif Y11_29711 6e5aacf3590a4cee0fdcf7df23706320 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 9.2E-60 T 13-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 Y11_29711 6e5aacf3590a4cee0fdcf7df23706320 156 SUPERFAMILY SSF81573 63 121 4.58E-15 T 13-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Y11_29711 6e5aacf3590a4cee0fdcf7df23706320 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 1.1E-38 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Y11_29711 6e5aacf3590a4cee0fdcf7df23706320 156 Gene3D G3DSA:1.20.5.620 62 122 1.6E-24 T 13-10-2018 Y11_29711 6e5aacf3590a4cee0fdcf7df23706320 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.285 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Y11_05771 7a9f00fbe7f2ef3a8fc9f1d790524208 412 Pfam PF04932 O-Antigen ligase 193 340 6.5E-15 T 13-10-2018 IPR007016 O-antigen ligase-related Y11_30571 5d3f263a1508a01680599c92b5776290 255 Gene3D G3DSA:2.60.40.10 35 154 4.4E-35 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_30571 5d3f263a1508a01680599c92b5776290 255 SUPERFAMILY SSF49584 160 247 1.02E-18 T 13-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily Y11_30571 5d3f263a1508a01680599c92b5776290 255 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 111 128 - T 13-10-2018 IPR018046 Pili assembly chaperone, conserved site Y11_30571 5d3f263a1508a01680599c92b5776290 255 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 233 4.7E-13 T 13-10-2018 IPR016148 Pili assembly chaperone, C-terminal Y11_30571 5d3f263a1508a01680599c92b5776290 255 SUPERFAMILY SSF49354 35 154 1.18E-32 T 13-10-2018 IPR008962 PapD-like superfamily Y11_30571 5d3f263a1508a01680599c92b5776290 255 Gene3D G3DSA:2.60.40.10 156 247 2.2E-19 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_30571 5d3f263a1508a01680599c92b5776290 255 PRINTS PR00969 Pili chaperone signature 135 150 6.7E-30 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_30571 5d3f263a1508a01680599c92b5776290 255 PRINTS PR00969 Pili chaperone signature 171 186 6.7E-30 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_30571 5d3f263a1508a01680599c92b5776290 255 PRINTS PR00969 Pili chaperone signature 82 103 6.7E-30 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_30571 5d3f263a1508a01680599c92b5776290 255 PRINTS PR00969 Pili chaperone signature 112 129 6.7E-30 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_30571 5d3f263a1508a01680599c92b5776290 255 PRINTS PR00969 Pili chaperone signature 36 45 6.7E-30 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_30571 5d3f263a1508a01680599c92b5776290 255 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 153 1.2E-32 T 13-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Y11_00571 f849675172439e4d6b15ef3476243d22 154 SUPERFAMILY SSF51197 1 154 9.34E-47 T 13-10-2018 Y11_00571 f849675172439e4d6b15ef3476243d22 154 Gene3D G3DSA:2.60.120.370 1 154 4.8E-45 T 13-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily Y11_00571 f849675172439e4d6b15ef3476243d22 154 Pfam PF04074 Domain of unknown function (DUF386) 1 150 1.6E-42 T 13-10-2018 IPR004375 YhcH/YjgK/YiaL family Y11_00571 f849675172439e4d6b15ef3476243d22 154 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 8.5E-47 T 13-10-2018 IPR004375 YhcH/YjgK/YiaL family Y11_07151 7112221cd6b401d8b2bb32e6cb5d1d03 94 SUPERFAMILY SSF103481 4 92 5.75E-16 T 13-10-2018 Y11_07151 7112221cd6b401d8b2bb32e6cb5d1d03 94 Pfam PF00892 EamA-like transporter family 4 91 4.2E-10 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_12311 e26661186ff2ccf74d6d136c3a7de3e7 53 Pfam PF10617 Protein of unknown function (DUF2474) 15 52 1.2E-20 T 13-10-2018 IPR018895 Protein of unknown function DUF2474 Y11_37971 1fcaf9ac46675b6c540c147c283415f9 145 SUPERFAMILY SSF102220 27 135 6.93E-35 T 13-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_37971 1fcaf9ac46675b6c540c147c283415f9 145 PIRSF PIRSF029225 2 131 1.1E-50 T 13-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_37971 1fcaf9ac46675b6c540c147c283415f9 145 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 1.0E-38 T 13-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_37971 1fcaf9ac46675b6c540c147c283415f9 145 Gene3D G3DSA:3.40.50.10220 33 137 8.5E-37 T 13-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_37971 1fcaf9ac46675b6c540c147c283415f9 145 Pfam PF03603 DNA polymerase III psi subunit 3 127 2.7E-46 T 13-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Y11_37521 54b47f4fd5167d05cc63103158e73426 435 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 17 398 8.5E-18 T 13-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Y11_37521 54b47f4fd5167d05cc63103158e73426 435 Gene3D G3DSA:1.10.4160.10 9 433 9.4E-47 T 13-10-2018 IPR038271 Purine-cytosine permease superfamily Y11_24891 d59ffb2241f4762dc53cde1bf7d5dde6 210 Gene3D G3DSA:3.90.79.10 3 209 7.6E-66 T 13-10-2018 Y11_24891 d59ffb2241f4762dc53cde1bf7d5dde6 210 SUPERFAMILY SSF55811 10 205 2.3E-50 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Y11_24891 d59ffb2241f4762dc53cde1bf7d5dde6 210 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Y11_24891 d59ffb2241f4762dc53cde1bf7d5dde6 210 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 2.3E-75 T 13-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 Y11_24891 d59ffb2241f4762dc53cde1bf7d5dde6 210 Pfam PF00293 NUDIX domain 59 180 5.9E-13 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Y11_06181 1d5021f260a783fd26ca8ae6972b72e1 38 Pfam PF10736 Protein of unknown function (DUF2627) 1 38 3.9E-29 T 13-10-2018 IPR019672 Protein of unknown function DUF2627 Y11_08831 377f7e7a387b6678c5c674206a9bc17c 337 Gene3D G3DSA:1.20.58.340 280 337 2.2E-11 T 13-10-2018 Y11_08831 377f7e7a387b6678c5c674206a9bc17c 337 SUPERFAMILY SSF143865 20 269 7.59E-53 T 13-10-2018 Y11_08831 377f7e7a387b6678c5c674206a9bc17c 337 Gene3D G3DSA:1.20.58.340 150 272 7.6E-42 T 13-10-2018 Y11_08831 377f7e7a387b6678c5c674206a9bc17c 337 Gene3D G3DSA:3.30.460.20 10 149 4.1E-44 T 13-10-2018 Y11_08831 377f7e7a387b6678c5c674206a9bc17c 337 SUPERFAMILY SSF144083 273 334 1.7E-13 T 13-10-2018 Y11_08831 377f7e7a387b6678c5c674206a9bc17c 337 Pfam PF01544 CorA-like Mg2+ transporter protein 49 333 6.7E-67 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Y11_08831 377f7e7a387b6678c5c674206a9bc17c 337 Hamap MF_01565 Zinc transport protein ZntB [zntB]. 11 337 68.695 T 13-10-2018 IPR023714 Zinc transport protein ZntB GO:0005385|GO:0005886|GO:0071577 Y11_09711 37a18b9d7f5530732c07c6f186ee9b30 420 Pfam PF00263 Bacterial type II and III secretion system protein 250 403 6.8E-25 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Y11_07181 4af6fd5d55533ed22d6613863d495027 346 Pfam PF00924 Mechanosensitive ion channel 121 323 2.9E-57 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Y11_07181 4af6fd5d55533ed22d6613863d495027 346 Gene3D G3DSA:2.30.30.60 178 228 2.2E-8 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Y11_07181 4af6fd5d55533ed22d6613863d495027 346 SUPERFAMILY SSF82861 79 160 1.22E-9 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Y11_07181 4af6fd5d55533ed22d6613863d495027 346 SUPERFAMILY SSF82689 231 335 5.89E-17 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Y11_07181 4af6fd5d55533ed22d6613863d495027 346 Gene3D G3DSA:3.30.70.100 231 328 5.1E-14 T 13-10-2018 Y11_07181 4af6fd5d55533ed22d6613863d495027 346 SUPERFAMILY SSF50182 162 228 1.34E-17 T 13-10-2018 IPR010920 LSM domain superfamily Y11_13071 d3a33174c71dba01c50558b65c0f612b 332 Pfam PF00589 Phage integrase family 159 319 1.2E-9 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Y11_13071 d3a33174c71dba01c50558b65c0f612b 332 Gene3D G3DSA:1.10.150.130 32 158 3.1E-13 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Y11_13071 d3a33174c71dba01c50558b65c0f612b 332 Gene3D G3DSA:1.10.443.10 159 323 1.7E-23 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Y11_13071 d3a33174c71dba01c50558b65c0f612b 332 SUPERFAMILY SSF56349 56 319 5.89E-49 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Y11_09311 15c2dc9e402a98d877c5d0a7bcab109c 1016 Pfam PF07520 Virulence factor SrfB 1 1013 0.0 T 13-10-2018 IPR009216 Virulence factor SrfB Y11_09311 15c2dc9e402a98d877c5d0a7bcab109c 1016 PIRSF PIRSF034585 1 1016 0.0 T 13-10-2018 IPR009216 Virulence factor SrfB Y11_09111 827dd97f74b1cfd30a7e1247a68781b1 426 SUPERFAMILY SSF52467 253 426 2.75E-78 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Y11_09111 827dd97f74b1cfd30a7e1247a68781b1 426 Pfam PF02233 NAD(P) transhydrogenase beta subunit 2 424 8.7E-192 T 13-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Y11_09111 827dd97f74b1cfd30a7e1247a68781b1 426 PIRSF PIRSF000204 1 426 2.5E-221 T 13-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 Y11_09111 827dd97f74b1cfd30a7e1247a68781b1 426 Gene3D G3DSA:3.40.50.1220 250 426 1.3E-87 T 13-10-2018 Y11_36681 437c728a415e9bb328f6e0f61628ef07 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 2.7E-26 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Y11_36681 437c728a415e9bb328f6e0f61628ef07 111 Pfam PF03840 Preprotein translocase SecG subunit 5 72 3.8E-22 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Y11_36681 437c728a415e9bb328f6e0f61628ef07 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 3.8E-41 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Y11_36681 437c728a415e9bb328f6e0f61628ef07 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 3.8E-41 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Y11_36681 437c728a415e9bb328f6e0f61628ef07 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 3.8E-41 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Y11_36681 437c728a415e9bb328f6e0f61628ef07 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 3.8E-41 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Y11_13571 83c9075e4ba11447a3bd24365413737e 112 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 14 89 2.0E-30 T 13-10-2018 IPR009707 Membrane protein GlpM/YdgC Y11_13571 83c9075e4ba11447a3bd24365413737e 112 Pfam PF06942 GlpM protein 5 111 2.0E-50 T 13-10-2018 IPR009707 Membrane protein GlpM/YdgC Y11_07101 c8abf94cdd2adb1a38e20ff6d3da6aec 254 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 204 27.863 T 13-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 Y11_07101 c8abf94cdd2adb1a38e20ff6d3da6aec 254 Pfam PF03932 CutC family 3 201 2.2E-72 T 13-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 Y11_07101 c8abf94cdd2adb1a38e20ff6d3da6aec 254 SUPERFAMILY SSF110395 3 244 3.79E-75 T 13-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 Y11_07101 c8abf94cdd2adb1a38e20ff6d3da6aec 254 Gene3D G3DSA:3.20.20.380 1 250 2.6E-86 T 13-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 Y11_17091 f472930e9232dd4e83a74b2386278b6d 267 SUPERFAMILY SSF56770 38 169 1.83E-48 T 13-10-2018 Y11_17091 f472930e9232dd4e83a74b2386278b6d 267 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 50 158 5.3E-23 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17091 f472930e9232dd4e83a74b2386278b6d 267 Gene3D G3DSA:3.40.50.12280 17 187 2.9E-50 T 13-10-2018 Y11_17091 f472930e9232dd4e83a74b2386278b6d 267 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 133 149 - T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_28631 39bc08ebb8adb9fa24e6eaac1a4f3514 251 SUPERFAMILY SSF52540 13 160 3.75E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_28631 39bc08ebb8adb9fa24e6eaac1a4f3514 251 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 49 152 5.7E-15 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Y11_28631 39bc08ebb8adb9fa24e6eaac1a4f3514 251 Gene3D G3DSA:3.40.50.300 2 183 1.3E-17 T 13-10-2018 Y11_27491 fb29d8986c220a6d334e127fffe51f62 182 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 182 6.1E-60 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Y11_27491 fb29d8986c220a6d334e127fffe51f62 182 Pfam PF00436 Single-strand binding protein family 6 112 2.8E-42 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Y11_27491 fb29d8986c220a6d334e127fffe51f62 182 SUPERFAMILY SSF50249 4 182 3.15E-61 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_27491 fb29d8986c220a6d334e127fffe51f62 182 Gene3D G3DSA:2.40.50.140 2 147 8.0E-53 T 13-10-2018 Y11_27491 fb29d8986c220a6d334e127fffe51f62 182 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 39.4 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Y11_27491 fb29d8986c220a6d334e127fffe51f62 182 PIRSF PIRSF002070 2 162 7.6E-42 T 13-10-2018 Y11_13061 cfb78609e80607826bbbe0c721492355 258 Pfam PF00665 Integrase core domain 132 253 8.5E-17 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_13061 cfb78609e80607826bbbe0c721492355 258 Gene3D G3DSA:1.10.10.60 7 41 2.6E-6 T 13-10-2018 Y11_40391 b69596be0fbd5c8bfd0f0ea1a7fdfdd8 197 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 9 189 1.2E-27 T 13-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 Y11_40391 b69596be0fbd5c8bfd0f0ea1a7fdfdd8 197 Pfam PF11612 Type II secretion system (T2SS), protein J 59 188 2.6E-13 T 13-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 Y11_40391 b69596be0fbd5c8bfd0f0ea1a7fdfdd8 197 SUPERFAMILY SSF54523 43 195 2.2E-32 T 13-10-2018 Y11_40391 b69596be0fbd5c8bfd0f0ea1a7fdfdd8 197 Gene3D G3DSA:3.10.610.10 39 142 2.2E-6 T 13-10-2018 Y11_40391 b69596be0fbd5c8bfd0f0ea1a7fdfdd8 197 Gene3D G3DSA:2.10.70.20 147 194 5.5E-8 T 13-10-2018 Y11_35011 caabc8398792e8fe552dda5a60b259f5 223 Gene3D G3DSA:3.20.20.70 11 218 7.6E-62 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_35011 caabc8398792e8fe552dda5a60b259f5 223 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 30 211 2.1E-57 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Y11_35011 caabc8398792e8fe552dda5a60b259f5 223 SUPERFAMILY SSF51391 11 216 1.44E-64 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Y11_35011 caabc8398792e8fe552dda5a60b259f5 223 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 11 216 20.313 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Y11_35011 caabc8398792e8fe552dda5a60b259f5 223 Pfam PF02581 Thiamine monophosphate synthase 30 198 6.3E-56 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Y11_04671 5a9c5353eea6623c6b73a2c67a7a8cb2 711 Pfam PF13515 Fusaric acid resistance protein-like 407 526 5.2E-24 T 13-10-2018 Y11_04671 5a9c5353eea6623c6b73a2c67a7a8cb2 711 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 706 3.4E-288 T 13-10-2018 IPR010020 Integral membrane protein, YccS/YhfK Y11_04671 5a9c5353eea6623c6b73a2c67a7a8cb2 711 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 706 0.0 T 13-10-2018 IPR010019 Integral membrane protein, YccS Y11_04671 5a9c5353eea6623c6b73a2c67a7a8cb2 711 Pfam PF12805 FUSC-like inner membrane protein yccS 68 347 6.1E-110 T 13-10-2018 IPR032692 Integral membrane protein YccS, N-terminal Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 194 228 6100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 841 873 5100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 1405 1436 6900.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 1052 1074 2800.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 400 420 7000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 1006 1027 7400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 1466 1490 630.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 251 282 1900.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 1174 1198 500.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 896 920 3400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 314 338 3300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 1219 1243 2400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 1259 1290 6900.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 121 142 660.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 1320 1344 650.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 1495 1536 1900.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_21521 8d2dab4a4011728d4232a6ea9de6c909 1700 SMART SM00710 1365 1389 2400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Y11_p0291 26aea1567ae5a0f980e9ee6735b7227b 58 SUPERFAMILY SSF46785 2 50 2.97E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_p0291 26aea1567ae5a0f980e9ee6735b7227b 58 Gene3D G3DSA:1.10.10.10 1 56 3.1E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_20111 937c9e23527b20f51a6aea5a59ee133d 1149 Gene3D G3DSA:2.30.30.60 954 1003 2.7E-12 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Y11_20111 937c9e23527b20f51a6aea5a59ee133d 1149 SUPERFAMILY SSF82861 854 937 1.19E-8 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Y11_20111 937c9e23527b20f51a6aea5a59ee133d 1149 SUPERFAMILY SSF82689 1006 1106 8.37E-26 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Y11_20111 937c9e23527b20f51a6aea5a59ee133d 1149 Pfam PF12795 Mechanosensitive ion channel porin domain 59 297 7.0E-63 T 13-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain Y11_20111 937c9e23527b20f51a6aea5a59ee133d 1149 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 517 835 3.9E-100 T 13-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 Y11_20111 937c9e23527b20f51a6aea5a59ee133d 1149 SUPERFAMILY SSF50182 939 1004 5.23E-16 T 13-10-2018 IPR010920 LSM domain superfamily Y11_20111 937c9e23527b20f51a6aea5a59ee133d 1149 Gene3D G3DSA:3.30.70.100 1007 1100 3.4E-20 T 13-10-2018 Y11_20111 937c9e23527b20f51a6aea5a59ee133d 1149 Pfam PF00924 Mechanosensitive ion channel 896 1095 4.3E-59 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Y11_22811 cabef756d7302793afc823ed5f77a67e 107 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 34.552 T 13-10-2018 IPR023081 Cell division protein FtsB Y11_22811 cabef756d7302793afc823ed5f77a67e 107 Gene3D G3DSA:1.20.5.400 21 63 3.6E-14 T 13-10-2018 Y11_22811 cabef756d7302793afc823ed5f77a67e 107 Pfam PF04977 Septum formation initiator 11 89 1.7E-27 T 13-10-2018 IPR007060 Septum formation initiator FtsL/DivIC Y11_35321 3cbcd59053b8925db6f4949aa9481936 71 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 1 71 5.3E-23 T 13-10-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 Y11_35321 3cbcd59053b8925db6f4949aa9481936 71 Gene3D G3DSA:1.20.58.90 2 71 5.9E-9 T 13-10-2018 Y11_35321 3cbcd59053b8925db6f4949aa9481936 71 SUPERFAMILY SSF140129 1 67 2.09E-20 T 13-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 Y11_35321 3cbcd59053b8925db6f4949aa9481936 71 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 3 71 2.6E-25 T 13-10-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 Y11_p0771 fe56be856a7b4e68a5e7937f25e5ebdc 154 Pfam PF07321 Type III secretion protein YscO 2 150 2.3E-46 T 13-10-2018 IPR009929 Type III secretion sytem,YscO Y11_22691 3a4ba7cf4589ee4ff38c0351f8ec8a61 174 SUPERFAMILY SSF49401 29 174 1.89E-38 T 13-10-2018 IPR008966 Adhesion domain superfamily Y11_22691 3a4ba7cf4589ee4ff38c0351f8ec8a61 174 Pfam PF00419 Fimbrial protein 31 174 7.3E-16 T 13-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 Y11_22691 3a4ba7cf4589ee4ff38c0351f8ec8a61 174 Gene3D G3DSA:2.60.40.1090 41 174 8.8E-37 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Y11_29551 a38089f641660b75d56af0274b69fbc1 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 4.0E-51 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_16491 05d56ac99503e3ab6d72e03b02f00bb8 148 SUPERFAMILY SSF52540 18 134 3.52E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_16491 05d56ac99503e3ab6d72e03b02f00bb8 148 Gene3D G3DSA:3.40.50.300 2 141 1.7E-25 T 13-10-2018 Y11_16491 05d56ac99503e3ab6d72e03b02f00bb8 148 Pfam PF00005 ABC transporter 23 74 2.8E-7 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_37461 0d5c2c67d415f59adcc1073a2916b36f 136 SUPERFAMILY SSF55729 33 135 3.22E-27 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_37461 0d5c2c67d415f59adcc1073a2916b36f 136 Pfam PF00583 Acetyltransferase (GNAT) family 31 114 1.1E-15 T 13-10-2018 IPR000182 GNAT domain Y11_37461 0d5c2c67d415f59adcc1073a2916b36f 136 Gene3D G3DSA:3.40.630.30 35 136 6.7E-29 T 13-10-2018 Y11_30791 4a8fae760b81c56bb5948661c4d9a89a 45 Gene3D G3DSA:2.60.40.1090 1 35 2.8E-6 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Y11_39501 4c0c7192caa7ce3b6eeebf1de87a1c77 452 SUPERFAMILY SSF88713 226 423 2.04E-29 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Y11_39501 4c0c7192caa7ce3b6eeebf1de87a1c77 452 Pfam PF01522 Polysaccharide deacetylase 263 401 1.3E-18 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Y11_39501 4c0c7192caa7ce3b6eeebf1de87a1c77 452 Gene3D G3DSA:3.20.20.370 195 438 2.6E-60 T 13-10-2018 Y11_29121 cd476e95867fd6086673f96fe7c45851 170 Pfam PF12098 Protein of unknown function (DUF3574) 71 170 5.8E-36 T 13-10-2018 IPR021957 Protein of unknown function DUF3574 Y11_39801 2a444f61cd1227973f4d26c4ae8a20c9 278 Gene3D G3DSA:1.10.287.1080 10 140 3.5E-44 T 13-10-2018 Y11_39801 2a444f61cd1227973f4d26c4ae8a20c9 278 TIGRFAM TIGR00444 mazG: MazG family protein 19 272 7.1E-106 T 13-10-2018 IPR011551 NTP pyrophosphohydrolase MazG Y11_39801 2a444f61cd1227973f4d26c4ae8a20c9 278 SUPERFAMILY SSF101386 12 112 4.11E-25 T 13-10-2018 Y11_39801 2a444f61cd1227973f4d26c4ae8a20c9 278 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 36 109 1.1E-27 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Y11_39801 2a444f61cd1227973f4d26c4ae8a20c9 278 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 183 244 1.8E-6 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Y11_39801 2a444f61cd1227973f4d26c4ae8a20c9 278 SUPERFAMILY SSF101386 151 251 4.86E-23 T 13-10-2018 Y11_39801 2a444f61cd1227973f4d26c4ae8a20c9 278 Gene3D G3DSA:1.10.287.1080 144 277 9.9E-47 T 13-10-2018 Y11_15041 e49f7baddfce4a364116e1c5e58d7f19 241 Gene3D G3DSA:3.40.50.300 61 241 8.7E-42 T 13-10-2018 Y11_15041 e49f7baddfce4a364116e1c5e58d7f19 241 Pfam PF01695 IstB-like ATP binding protein 54 228 2.9E-56 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Y11_15041 e49f7baddfce4a364116e1c5e58d7f19 241 SUPERFAMILY SSF52540 64 228 3.07E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_15041 e49f7baddfce4a364116e1c5e58d7f19 241 PIRSF PIRSF003073 1 241 5.8E-73 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Y11_15041 e49f7baddfce4a364116e1c5e58d7f19 241 SMART SM00382 97 229 9.6E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_28461 323ea47d738f79b22f23d207f91fb2c5 103 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 19 97 5.1E-7 T 13-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative Y11_01791 4925a0bddbf2b8231f164830223cfcaa 220 Pfam PF09335 SNARE associated Golgi protein 49 176 4.5E-26 T 13-10-2018 IPR032816 SNARE associated Golgi protein Y11_00261 305fca9623497d0196e47222915de9a7 236 Gene3D G3DSA:3.30.1380.10 5 204 1.5E-32 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Y11_00261 305fca9623497d0196e47222915de9a7 236 SUPERFAMILY SSF55166 20 186 4.71E-20 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Y11_00261 305fca9623497d0196e47222915de9a7 236 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 27 183 2.1E-36 T 13-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 Y11_38041 63288983b74d18cf46db778ba57cabc2 423 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 2 420 1.4E-151 T 13-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 Y11_38041 63288983b74d18cf46db778ba57cabc2 423 Pfam PF07670 Nucleoside recognition 97 193 1.0E-8 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Y11_38041 63288983b74d18cf46db778ba57cabc2 423 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 199 420 2.7E-75 T 13-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 Y11_38041 63288983b74d18cf46db778ba57cabc2 423 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 6 79 8.5E-21 T 13-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 Y11_25921 b1d01f25a04c9640e428398cb3710899 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 3.2E-32 T 13-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 Y11_25921 b1d01f25a04c9640e428398cb3710899 101 Gene3D G3DSA:1.20.120.20 3 78 2.4E-5 T 13-10-2018 Y11_16541 2661b25c0c3f4681bcf5baccbefc011a 374 Gene3D G3DSA:3.90.1150.10 10 348 8.2E-134 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_16541 2661b25c0c3f4681bcf5baccbefc011a 374 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 353 3.6E-121 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Y11_16541 2661b25c0c3f4681bcf5baccbefc011a 374 Gene3D G3DSA:3.40.640.10 55 259 8.2E-134 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_16541 2661b25c0c3f4681bcf5baccbefc011a 374 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 212 221 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Y11_16541 2661b25c0c3f4681bcf5baccbefc011a 374 SUPERFAMILY SSF53383 7 353 8.11E-80 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_16541 2661b25c0c3f4681bcf5baccbefc011a 374 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 356 54.866 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Y11_16541 2661b25c0c3f4681bcf5baccbefc011a 374 Pfam PF00155 Aminotransferase class I and II 47 352 9.4E-61 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_43051 c639241dc66788dd2d8d08ff7125d343 622 Gene3D G3DSA:2.60.20.10 18 120 2.0E-12 T 13-10-2018 Y11_30871 c5d84726c1f7f0e566055bcad1066e74 441 PIRSF PIRSF006351 5 437 6.4E-139 T 13-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 Y11_30871 c5d84726c1f7f0e566055bcad1066e74 441 Pfam PF02378 Phosphotransferase system, EIIC 33 352 5.4E-53 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Y11_30871 c5d84726c1f7f0e566055bcad1066e74 441 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 426 3.8E-112 T 13-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 Y11_32881 a0390d77be1154b924ab7b5a15831ca0 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 3.6E-92 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_32881 a0390d77be1154b924ab7b5a15831ca0 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.962 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_32881 a0390d77be1154b924ab7b5a15831ca0 209 SUPERFAMILY SSF50447 1 208 1.15E-79 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Y11_32881 a0390d77be1154b924ab7b5a15831ca0 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 13-10-2018 IPR019926 Ribosomal protein L3, conserved site Y11_32881 a0390d77be1154b924ab7b5a15831ca0 209 Gene3D G3DSA:2.40.50.620 32 94 6.1E-15 T 13-10-2018 Y11_32881 a0390d77be1154b924ab7b5a15831ca0 209 Pfam PF00297 Ribosomal protein L3 94 182 2.9E-12 T 13-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Y11_32881 a0390d77be1154b924ab7b5a15831ca0 209 Gene3D G3DSA:2.40.30.10 128 209 4.6E-18 T 13-10-2018 Y11_p0001 75dfda45772f4a57ffd459d8af8432be 241 PIRSF PIRSF003073 1 241 6.5E-74 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Y11_p0001 75dfda45772f4a57ffd459d8af8432be 241 SUPERFAMILY SSF52540 64 228 4.41E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_p0001 75dfda45772f4a57ffd459d8af8432be 241 Gene3D G3DSA:3.40.50.300 61 241 5.7E-42 T 13-10-2018 Y11_p0001 75dfda45772f4a57ffd459d8af8432be 241 SMART SM00382 97 229 5.1E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_p0001 75dfda45772f4a57ffd459d8af8432be 241 Pfam PF01695 IstB-like ATP binding protein 54 228 3.4E-56 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Y11_28151 7efade48cafa9cfecdee29fac6ee4121 386 PIRSF PIRSF001434 1 384 2.4E-136 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Y11_28151 7efade48cafa9cfecdee29fac6ee4121 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Y11_28151 7efade48cafa9cfecdee29fac6ee4121 386 Gene3D G3DSA:3.90.1150.10 248 384 2.2E-55 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_28151 7efade48cafa9cfecdee29fac6ee4121 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 381 6.6E-207 T 13-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 Y11_28151 7efade48cafa9cfecdee29fac6ee4121 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 381 5.4E-142 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Y11_28151 7efade48cafa9cfecdee29fac6ee4121 386 SUPERFAMILY SSF53383 5 381 1.5E-121 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_28151 7efade48cafa9cfecdee29fac6ee4121 386 Gene3D G3DSA:3.40.640.10 1 247 9.6E-86 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_37631 30452ffee97cc70ae2eb35c25b28c4a9 330 Gene3D G3DSA:3.40.50.1360 81 328 5.3E-84 T 13-10-2018 Y11_37631 30452ffee97cc70ae2eb35c25b28c4a9 330 Pfam PF04198 Putative sugar-binding domain 79 327 1.3E-69 T 13-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 Y11_37631 30452ffee97cc70ae2eb35c25b28c4a9 330 SUPERFAMILY SSF100950 79 329 4.56E-59 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Y11_37631 30452ffee97cc70ae2eb35c25b28c4a9 330 Gene3D G3DSA:1.10.10.10 14 75 3.8E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_10871 63a001338e4bd78c4cb93adccdf2937a 156 SUPERFAMILY SSF54637 21 146 4.34E-39 T 13-10-2018 IPR029069 HotDog domain superfamily Y11_10871 63a001338e4bd78c4cb93adccdf2937a 156 Gene3D G3DSA:3.10.129.10 16 154 2.2E-43 T 13-10-2018 Y11_10871 63a001338e4bd78c4cb93adccdf2937a 156 Pfam PF03061 Thioesterase superfamily 40 111 1.8E-18 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Y11_21971 c251ddfdc8b33ce261eab538dccb1132 216 Pfam PF02371 Transposase IS116/IS110/IS902 family 92 168 5.0E-22 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_33761 ff05f2a7cf1d3f71059dbc5ad961ebbe 361 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 357 1.3E-179 T 13-10-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 Y11_33761 ff05f2a7cf1d3f71059dbc5ad961ebbe 361 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 361 67.96 T 13-10-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 Y11_21731 110a32b5a48fb2f5441dbe7549837943 465 SUPERFAMILY SSF75304 2 454 3.14E-128 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Y11_21731 110a32b5a48fb2f5441dbe7549837943 465 Gene3D G3DSA:3.90.1300.10 3 460 1.1E-126 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Y11_21731 110a32b5a48fb2f5441dbe7549837943 465 Pfam PF01425 Amidase 28 445 3.1E-97 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Y11_21731 110a32b5a48fb2f5441dbe7549837943 465 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 9 459 1.1E-225 T 13-10-2018 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169 Y11_07861 6ca375dde3164bd2f601b4fc92723eb9 116 SUPERFAMILY SSF55200 23 115 5.36E-33 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Y11_07861 6ca375dde3164bd2f601b4fc92723eb9 116 Gene3D G3DSA:3.30.110.10 14 116 5.9E-38 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Y11_07861 6ca375dde3164bd2f601b4fc92723eb9 116 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 24 113 3.0E-36 T 13-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Y11_07861 6ca375dde3164bd2f601b4fc92723eb9 116 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 115 2.0E-46 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Y11_27541 3b6260b4cbb6007b70efa3e82a22789f 468 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 1.8E-111 T 13-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Y11_27541 3b6260b4cbb6007b70efa3e82a22789f 468 SMART SM00382 220 426 3.6E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_27541 3b6260b4cbb6007b70efa3e82a22789f 468 SUPERFAMILY SSF48024 22 133 4.18E-38 T 13-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Y11_27541 3b6260b4cbb6007b70efa3e82a22789f 468 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 2.2E-36 T 13-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Y11_27541 3b6260b4cbb6007b70efa3e82a22789f 468 Gene3D G3DSA:3.40.50.300 181 460 1.3E-105 T 13-10-2018 Y11_27541 3b6260b4cbb6007b70efa3e82a22789f 468 SUPERFAMILY SSF52540 201 452 9.86E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_27541 3b6260b4cbb6007b70efa3e82a22789f 468 Gene3D G3DSA:1.10.860.10 17 180 1.6E-54 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Y11_27541 3b6260b4cbb6007b70efa3e82a22789f 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 23 461 4.7E-175 T 13-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Y11_24281 aa346d06194528ef5e097139d8590203 221 Pfam PF02107 Flagellar L-ring protein 45 218 5.8E-58 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Y11_24281 aa346d06194528ef5e097139d8590203 221 PRINTS PR01008 Flagellar L-ring protein signature 181 195 7.6E-23 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Y11_24281 aa346d06194528ef5e097139d8590203 221 PRINTS PR01008 Flagellar L-ring protein signature 160 176 7.6E-23 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Y11_24281 aa346d06194528ef5e097139d8590203 221 PRINTS PR01008 Flagellar L-ring protein signature 197 211 7.6E-23 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Y11_24281 aa346d06194528ef5e097139d8590203 221 PRINTS PR01008 Flagellar L-ring protein signature 66 78 7.6E-23 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Y11_24281 aa346d06194528ef5e097139d8590203 221 PRINTS PR01008 Flagellar L-ring protein signature 134 149 7.6E-23 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Y11_24281 aa346d06194528ef5e097139d8590203 221 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 218 25.459 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Y11_33821 8dc50384f0a59e4bc33f383574ebb1ee 150 Pfam PF02371 Transposase IS116/IS110/IS902 family 39 98 4.1E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_30541 0643d5f22c634a9bce206ab0d09bca86 330 Pfam PF01757 Acyltransferase family 6 317 6.9E-30 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Y11_30541 0643d5f22c634a9bce206ab0d09bca86 330 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 330 39.68 T 13-10-2018 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 Y11_09241 d2852832794d5bf9012fca0f60a58991 752 SUPERFAMILY SSF158682 491 613 1.13E-15 T 13-10-2018 IPR029024 TerB-like Y11_09241 d2852832794d5bf9012fca0f60a58991 752 Pfam PF13208 TerB N-terminal domain 85 287 3.6E-52 T 13-10-2018 IPR025266 TerB, N-terminal Y11_09241 d2852832794d5bf9012fca0f60a58991 752 Pfam PF15615 TerB-C domain 631 748 1.1E-9 T 13-10-2018 IPR028932 TerB-C domain Y11_08401 c2322d46aebe9c1fc5a558ffbeecd70c 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 2.2E-7 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Y11_08401 c2322d46aebe9c1fc5a558ffbeecd70c 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 2.2E-7 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Y11_08401 c2322d46aebe9c1fc5a558ffbeecd70c 298 Pfam PF00248 Aldo/keto reductase family 17 291 6.2E-65 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain Y11_08401 c2322d46aebe9c1fc5a558ffbeecd70c 298 Gene3D G3DSA:3.20.20.100 2 298 1.1E-108 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Y11_08401 c2322d46aebe9c1fc5a558ffbeecd70c 298 SUPERFAMILY SSF51430 10 295 8.64E-74 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Y11_13471 c5b9a4155d873811b1eac21f0f23a6f2 40 Pfam PF06528 Phage P2 GpE 1 36 4.5E-20 T 13-10-2018 IPR009493 Burkholderia phage phiE202, Gp27 Y11_25181 c5b9a4155d873811b1eac21f0f23a6f2 40 Pfam PF06528 Phage P2 GpE 1 36 4.5E-20 T 13-10-2018 IPR009493 Burkholderia phage phiE202, Gp27 Y11_06641 b1a4defac43f696809fe57b62e0f7b09 313 Pfam PF00872 Transposase, Mutator family 10 286 9.5E-85 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Y11_00541 d4ae30124b63f8e154763fc2587e6381 211 SUPERFAMILY SSF51366 4 196 4.24E-50 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Y11_00541 d4ae30124b63f8e154763fc2587e6381 211 Gene3D G3DSA:3.20.20.70 1 200 2.0E-79 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_00541 d4ae30124b63f8e154763fc2587e6381 211 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 7 197 1.0E-84 T 13-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 Y11_00541 d4ae30124b63f8e154763fc2587e6381 211 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 1 197 32.617 T 13-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 Y11_33561 24480de71290f73c7bfc514b625b74a5 424 Gene3D G3DSA:2.60.40.1090 252 422 1.2E-8 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Y11_33561 24480de71290f73c7bfc514b625b74a5 424 PIRSF PIRSF029766 5 424 1.5E-171 T 13-10-2018 IPR011228 Uncharacterised conserved protein UCP029766 Y11_33561 24480de71290f73c7bfc514b625b74a5 424 SUPERFAMILY SSF49401 254 422 9.44E-10 T 13-10-2018 IPR008966 Adhesion domain superfamily Y11_33561 24480de71290f73c7bfc514b625b74a5 424 Pfam PF00419 Fimbrial protein 245 424 1.0E-27 T 13-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 Y11_41651 d98251d7a94faa3471ccfa31722c13b2 411 Gene3D G3DSA:1.20.1250.20 16 398 9.4E-38 T 13-10-2018 Y11_41651 d98251d7a94faa3471ccfa31722c13b2 411 SUPERFAMILY SSF103473 21 402 5.36E-47 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_41651 d98251d7a94faa3471ccfa31722c13b2 411 Hamap MF_01118 Uncharacterized MFS-type transporter YhhS [yhhS]. 12 401 41.259 T 13-10-2018 IPR023008 Uncharacterized MFS-type transporter YhhS-like Y11_41651 d98251d7a94faa3471ccfa31722c13b2 411 Pfam PF07690 Major Facilitator Superfamily 28 271 2.2E-14 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_06561 dc626825890621f4eb23feba7dd21b74 380 Pfam PF05954 Phage late control gene D protein (GPD) 65 359 1.3E-33 T 13-10-2018 Y11_06561 dc626825890621f4eb23feba7dd21b74 380 SUPERFAMILY SSF69279 15 187 1.3E-25 T 13-10-2018 Y11_40171 9291fd0337df4058bdc084d3334ca4f0 400 Pfam PF00872 Transposase, Mutator family 10 373 1.5E-102 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Y11_42081 9291fd0337df4058bdc084d3334ca4f0 400 Pfam PF00872 Transposase, Mutator family 10 373 1.5E-102 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Y11_22231 470485588f8c8a8fc45bfc582488974a 201 Pfam PF02613 Nitrate reductase delta subunit 52 156 3.7E-18 T 13-10-2018 IPR020945 DMSO/Nitrate reductase chaperone Y11_22231 470485588f8c8a8fc45bfc582488974a 201 Gene3D G3DSA:1.10.3480.10 2 201 2.8E-49 T 13-10-2018 Y11_22231 470485588f8c8a8fc45bfc582488974a 201 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 1 201 42.984 T 13-10-2018 IPR028611 Tat proofreading chaperone DmsD GO:0005048 Y11_22231 470485588f8c8a8fc45bfc582488974a 201 PIRSF PIRSF004690 1 201 4.0E-65 T 13-10-2018 IPR026269 Tat proofreading chaperone DmsD-type Y11_22231 470485588f8c8a8fc45bfc582488974a 201 SUPERFAMILY SSF89155 2 201 4.97E-51 T 13-10-2018 IPR036411 TorD-like superfamily Y11_35091 3257f539d411bc026f47419fd247ef9a 219 Pfam PF07356 Protein of unknown function (DUF1481) 30 215 2.5E-76 T 13-10-2018 IPR010858 Protein of unknown function DUF1481 Y11_22101 f9faedaaca8ae4e3d1d10478033432ad 426 Pfam PF01595 Domain of unknown function DUF21 12 185 5.1E-51 T 13-10-2018 IPR002550 CNNM, transmembrane domain Y11_22101 f9faedaaca8ae4e3d1d10478033432ad 426 Gene3D G3DSA:3.30.465.10 341 419 3.9E-24 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Y11_22101 f9faedaaca8ae4e3d1d10478033432ad 426 SMART SM01091 343 420 9.2E-22 T 13-10-2018 IPR005170 Transporter-associated domain Y11_22101 f9faedaaca8ae4e3d1d10478033432ad 426 Gene3D G3DSA:3.10.580.10 202 331 4.2E-43 T 13-10-2018 Y11_22101 f9faedaaca8ae4e3d1d10478033432ad 426 SUPERFAMILY SSF54631 193 330 9.98E-23 T 13-10-2018 Y11_22101 f9faedaaca8ae4e3d1d10478033432ad 426 Pfam PF03471 Transporter associated domain 345 418 9.1E-17 T 13-10-2018 IPR005170 Transporter-associated domain Y11_22101 f9faedaaca8ae4e3d1d10478033432ad 426 SUPERFAMILY SSF56176 341 422 8.45E-19 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Y11_33801 138b4410421d4c9c4bfd93137d144e80 208 Gene3D G3DSA:1.20.1740.10 1 206 4.4E-13 T 13-10-2018 Y11_33801 138b4410421d4c9c4bfd93137d144e80 208 Pfam PF00324 Amino acid permease 2 175 4.4E-31 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Y11_31731 e9cabdcaa5d35509aadc483d5698afb8 166 Pfam PF00583 Acetyltransferase (GNAT) family 39 137 2.5E-17 T 13-10-2018 IPR000182 GNAT domain Y11_31731 e9cabdcaa5d35509aadc483d5698afb8 166 SUPERFAMILY SSF55729 2 162 3.37E-36 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_31731 e9cabdcaa5d35509aadc483d5698afb8 166 Gene3D G3DSA:3.40.630.30 1 163 2.9E-40 T 13-10-2018 Y11_37261 2db2c35f1e8498afc7ad8380b324701c 152 Gene3D G3DSA:2.60.120.370 1 152 8.5E-41 T 13-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily Y11_37261 2db2c35f1e8498afc7ad8380b324701c 152 Pfam PF04074 Domain of unknown function (DUF386) 1 149 1.2E-44 T 13-10-2018 IPR004375 YhcH/YjgK/YiaL family Y11_37261 2db2c35f1e8498afc7ad8380b324701c 152 SUPERFAMILY SSF51197 1 151 2.72E-44 T 13-10-2018 Y11_37261 2db2c35f1e8498afc7ad8380b324701c 152 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 1.4E-51 T 13-10-2018 IPR004375 YhcH/YjgK/YiaL family Y11_11471 1dec71eb17dd2fc3b031c61dae2243f8 524 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 524 364.833 T 13-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 Y11_11471 1dec71eb17dd2fc3b031c61dae2243f8 524 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 512 6.1E-278 T 13-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 Y11_11471 1dec71eb17dd2fc3b031c61dae2243f8 524 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 511 5.3E-278 T 13-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 Y11_16861 895e9bb55772f37fffdaa7578cd2626e 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 102 351 37.096 T 13-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Y11_16861 895e9bb55772f37fffdaa7578cd2626e 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 107 350 1.9E-100 T 13-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Y11_16861 895e9bb55772f37fffdaa7578cd2626e 370 SUPERFAMILY SSF52540 109 356 5.0E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_16861 895e9bb55772f37fffdaa7578cd2626e 370 ProSitePatterns PS01215 Mrp family signature. 214 230 - T 13-10-2018 IPR000808 Mrp, conserved site GO:0005524 Y11_16861 895e9bb55772f37fffdaa7578cd2626e 370 Gene3D G3DSA:3.40.50.300 96 349 8.5E-81 T 13-10-2018 Y11_30661 0ba32959a87ea5370622d9e317a25c7a 375 Gene3D G3DSA:1.10.443.10 189 370 2.7E-18 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Y11_30661 0ba32959a87ea5370622d9e317a25c7a 375 SUPERFAMILY SSF56349 85 366 5.0E-63 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Y11_30661 0ba32959a87ea5370622d9e317a25c7a 375 Pfam PF13356 Arm DNA-binding domain 5 73 1.3E-17 T 13-10-2018 IPR025166 Integrase, DNA-binding domain Y11_30661 0ba32959a87ea5370622d9e317a25c7a 375 Gene3D G3DSA:1.10.150.130 75 188 6.4E-34 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Y11_30661 0ba32959a87ea5370622d9e317a25c7a 375 Gene3D G3DSA:3.30.160.390 1 74 2.3E-27 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Y11_30661 0ba32959a87ea5370622d9e317a25c7a 375 Pfam PF00589 Phage integrase family 192 356 1.2E-25 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Y11_00381 0783fa1e7b08a96675f0b4db7c04e55b 155 PIRSF PIRSF006105 10 155 2.5E-53 T 13-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB Y11_00381 0783fa1e7b08a96675f0b4db7c04e55b 155 Gene3D G3DSA:1.10.1130.10 68 135 9.9E-30 T 13-10-2018 Y11_00381 0783fa1e7b08a96675f0b4db7c04e55b 155 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 41 148 4.5E-46 T 13-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB Y11_00381 0783fa1e7b08a96675f0b4db7c04e55b 155 SUPERFAMILY SSF48695 54 150 3.02E-41 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Y11_14381 8368d06c7832516798e9c09d37d675c1 238 Hamap MF_00415 Flagellar L-ring protein [flgH]. 6 236 27.624 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Y11_14381 8368d06c7832516798e9c09d37d675c1 238 PRINTS PR01008 Flagellar L-ring protein signature 215 229 1.9E-35 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Y11_14381 8368d06c7832516798e9c09d37d675c1 238 PRINTS PR01008 Flagellar L-ring protein signature 178 194 1.9E-35 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Y11_14381 8368d06c7832516798e9c09d37d675c1 238 PRINTS PR01008 Flagellar L-ring protein signature 79 91 1.9E-35 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Y11_14381 8368d06c7832516798e9c09d37d675c1 238 PRINTS PR01008 Flagellar L-ring protein signature 199 213 1.9E-35 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Y11_14381 8368d06c7832516798e9c09d37d675c1 238 PRINTS PR01008 Flagellar L-ring protein signature 152 167 1.9E-35 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Y11_14381 8368d06c7832516798e9c09d37d675c1 238 Pfam PF02107 Flagellar L-ring protein 54 237 5.9E-61 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Y11_00901 3606cff6d59635da3f612aa65c3cc86e 295 Gene3D G3DSA:1.10.10.10 2 85 3.1E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_00901 3606cff6d59635da3f612aa65c3cc86e 295 Pfam PF03466 LysR substrate binding domain 89 284 6.3E-28 T 13-10-2018 IPR005119 LysR, substrate-binding Y11_00901 3606cff6d59635da3f612aa65c3cc86e 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.7E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_00901 3606cff6d59635da3f612aa65c3cc86e 295 SUPERFAMILY SSF53850 90 290 5.07E-33 T 13-10-2018 Y11_00901 3606cff6d59635da3f612aa65c3cc86e 295 SUPERFAMILY SSF46785 6 83 2.83E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_00901 3606cff6d59635da3f612aa65c3cc86e 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.4E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_00901 3606cff6d59635da3f612aa65c3cc86e 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.4E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_00901 3606cff6d59635da3f612aa65c3cc86e 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.4E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_00901 3606cff6d59635da3f612aa65c3cc86e 295 Gene3D G3DSA:3.40.190.290 94 267 7.5E-22 T 13-10-2018 Y11_09421 810ee9ef464f4c901a3ab0f381db227f 88 SUPERFAMILY SSF53041 6 60 1.57E-6 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Y11_09421 810ee9ef464f4c901a3ab0f381db227f 88 Pfam PF13700 Domain of unknown function (DUF4158) 40 87 1.8E-10 T 13-10-2018 IPR025296 Domain of unknown function DUF4158 Y11_09581 406f06648945f1f9d285e172ceb320d0 500 Pfam PF13449 Esterase-like activity of phytase 142 473 6.1E-65 T 13-10-2018 IPR027372 Phytase-like domain Y11_09581 406f06648945f1f9d285e172ceb320d0 500 SUPERFAMILY SSF63829 145 349 4.71E-6 T 13-10-2018 Y11_41871 0d3d710a15603f8655560fe1e7dd6d8d 221 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 15 186 1.8E-30 T 13-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Y11_41871 0d3d710a15603f8655560fe1e7dd6d8d 221 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 14 210 1.9E-79 T 13-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 Y11_41871 0d3d710a15603f8655560fe1e7dd6d8d 221 Gene3D G3DSA:3.40.50.300 12 212 4.2E-45 T 13-10-2018 Y11_41871 0d3d710a15603f8655560fe1e7dd6d8d 221 PIRSF PIRSF005624 2 218 3.4E-47 T 13-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 Y11_41871 0d3d710a15603f8655560fe1e7dd6d8d 221 Hamap MF_01389 Urease accessory protein UreG [ureG]. 11 212 45.13 T 13-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 Y11_41871 0d3d710a15603f8655560fe1e7dd6d8d 221 SUPERFAMILY SSF52540 9 207 1.79E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_33611 95e95225e50fd6adb70902dffc6c2f02 674 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 40.629 T 13-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 Y11_33611 95e95225e50fd6adb70902dffc6c2f02 674 SUPERFAMILY SSF52540 2 638 3.11E-160 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_33611 95e95225e50fd6adb70902dffc6c2f02 674 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 666 0.0 T 13-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 Y11_33611 95e95225e50fd6adb70902dffc6c2f02 674 Gene3D G3DSA:3.40.50.300 274 632 1.8E-133 T 13-10-2018 Y11_33611 95e95225e50fd6adb70902dffc6c2f02 674 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 2.6E-71 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Y11_33611 95e95225e50fd6adb70902dffc6c2f02 674 Gene3D G3DSA:1.10.486.10 377 544 1.8E-133 T 13-10-2018 Y11_33611 95e95225e50fd6adb70902dffc6c2f02 674 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 3.7E-74 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Y11_33611 95e95225e50fd6adb70902dffc6c2f02 674 Gene3D G3DSA:3.40.50.300 4 266 3.9E-99 T 13-10-2018 Y11_33611 95e95225e50fd6adb70902dffc6c2f02 674 Gene3D G3DSA:1.10.10.160 108 181 3.9E-99 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily Y11_28441 d02361f8c4b5a3e146b124ff02329ab0 807 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 204 543 2.0E-89 T 13-10-2018 IPR010090 Phage tail tape measure protein Y11_28441 d02361f8c4b5a3e146b124ff02329ab0 807 Pfam PF10145 Phage-related minor tail protein 240 440 6.4E-37 T 13-10-2018 IPR010090 Phage tail tape measure protein Y11_15751 0f4b3a48beaa39cb23c84cc57ca2370e 183 SUPERFAMILY SSF49401 27 183 1.69E-23 T 13-10-2018 IPR008966 Adhesion domain superfamily Y11_15751 0f4b3a48beaa39cb23c84cc57ca2370e 183 Gene3D G3DSA:2.60.40.1090 26 183 6.6E-28 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Y11_15751 0f4b3a48beaa39cb23c84cc57ca2370e 183 Pfam PF16970 Type-1 fimbrial protein, A 52 182 1.0E-11 T 13-10-2018 IPR039458 Type-1 fimbrial protein, A Y11_14701 911c91e3687248aa7067d423756cf806 139 SUPERFAMILY SSF52402 3 138 1.67E-23 T 13-10-2018 Y11_14701 911c91e3687248aa7067d423756cf806 139 Gene3D G3DSA:3.40.50.620 3 139 5.6E-29 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y11_14701 911c91e3687248aa7067d423756cf806 139 PIRSF PIRSF006276 1 139 1.9E-41 T 13-10-2018 IPR006015 Universal stress protein A Y11_14701 911c91e3687248aa7067d423756cf806 139 Pfam PF00582 Universal stress protein family 2 138 9.9E-17 T 13-10-2018 IPR006016 UspA Y11_15771 05732d10ed0f18db5caa8d65744c2cb1 626 PIRSF PIRSF028304 1 626 8.6E-158 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like Y11_15771 05732d10ed0f18db5caa8d65744c2cb1 626 Pfam PF05947 Type VI secretion system, TssF 6 623 5.1E-202 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like Y11_15771 05732d10ed0f18db5caa8d65744c2cb1 626 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 625 3.7E-195 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like Y11_23701 5c4f94a1126dfe3ede5cd9472860d6c6 294 Pfam PF01032 FecCD transport family 12 290 4.3E-43 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Y11_23701 5c4f94a1126dfe3ede5cd9472860d6c6 294 Gene3D G3DSA:1.10.3470.10 4 293 1.3E-43 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_23701 5c4f94a1126dfe3ede5cd9472860d6c6 294 SUPERFAMILY SSF81345 10 290 2.75E-44 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_08911 17299353806a7c6b362b87bfd9c0fe68 105 Pfam PF03891 Domain of unknown function (DUF333) 54 101 3.1E-26 T 13-10-2018 IPR005590 Protein of unknown function DUF333 Y11_38501 7e5dcd0b1f16146665e9f479cc06de14 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 2.5E-99 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Y11_38501 7e5dcd0b1f16146665e9f479cc06de14 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 36.58 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Y11_38501 7e5dcd0b1f16146665e9f479cc06de14 317 Pfam PF02401 LytB protein 3 283 2.0E-92 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Y11_38501 7e5dcd0b1f16146665e9f479cc06de14 317 Gene3D G3DSA:3.40.1010.20 6 283 8.1E-112 T 13-10-2018 Y11_38501 7e5dcd0b1f16146665e9f479cc06de14 317 Gene3D G3DSA:3.40.1010.20 98 197 8.1E-112 T 13-10-2018 Y11_38501 7e5dcd0b1f16146665e9f479cc06de14 317 Gene3D G3DSA:3.40.50.11270 12 97 8.1E-112 T 13-10-2018 Y11_25191 7ba10ab5c5b4f1510be36e4620a83211 103 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 19 97 1.0E-8 T 13-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative Y11_13461 7ba10ab5c5b4f1510be36e4620a83211 103 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 19 97 1.0E-8 T 13-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative Y11_01481 db7852ceb5d28c67ac859614a9546984 361 PIRSF PIRSF001456 3 358 2.6E-144 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Y11_01481 db7852ceb5d28c67ac859614a9546984 361 Pfam PF01264 Chorismate synthase 10 345 4.3E-144 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Y11_01481 db7852ceb5d28c67ac859614a9546984 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.1E-141 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Y11_01481 db7852ceb5d28c67ac859614a9546984 361 SUPERFAMILY SSF103263 4 351 2.22E-149 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Y11_01481 db7852ceb5d28c67ac859614a9546984 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Y11_01481 db7852ceb5d28c67ac859614a9546984 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Y11_01481 db7852ceb5d28c67ac859614a9546984 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Y11_01481 db7852ceb5d28c67ac859614a9546984 361 Gene3D G3DSA:3.60.150.10 1 360 1.9E-160 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Y11_01481 db7852ceb5d28c67ac859614a9546984 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 37.971 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Y11_02971 61f7ebf7dbb6b24c4000f2b0725c9e30 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 45.54 T 13-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 Y11_02971 61f7ebf7dbb6b24c4000f2b0725c9e30 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 5.8E-98 T 13-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 Y11_05131 024bcc2a7d59d1fdea4338bc53cd3d81 37 Pfam PF10968 Protein of unknown function (DUF2770) 2 37 6.9E-19 T 13-10-2018 IPR024494 Protein of unknown function DUF2770 Y11_p0861 814da358703488dcb023c2aa19af90a9 95 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 7 95 6.0E-45 T 13-10-2018 IPR009863 Type III secretion protein, LcrG Y11_p0861 814da358703488dcb023c2aa19af90a9 95 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 11 95 2.0E-43 T 13-10-2018 IPR009863 Type III secretion protein, LcrG Y11_p0861 814da358703488dcb023c2aa19af90a9 95 Pfam PF07216 LcrG protein 5 95 7.7E-45 T 13-10-2018 IPR009863 Type III secretion protein, LcrG Y11_30371 0e090e9122f823923902d18607ac0fac 184 Gene3D G3DSA:1.20.120.330 3 172 1.9E-62 T 13-10-2018 Y11_30371 0e090e9122f823923902d18607ac0fac 184 Pfam PF05068 Mannitol repressor 9 170 5.0E-63 T 13-10-2018 IPR007761 Mannitol repressor MtlR-like Y11_30371 0e090e9122f823923902d18607ac0fac 184 SUPERFAMILY SSF158668 6 170 2.49E-58 T 13-10-2018 IPR038026 MtlR-like superfamily Y11_17911 f371f557a83cb0150126b830d97c25b4 113 Pfam PF01844 HNH endonuclease 27 75 3.0E-10 T 13-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 Y11_17911 f371f557a83cb0150126b830d97c25b4 113 SMART SM00507 15 70 3.5E-4 T 13-10-2018 IPR003615 HNH nuclease Y11_00441 482d3ca9b8648c60118297467d007703 130 SUPERFAMILY SSF46785 2 83 3.9E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_00441 482d3ca9b8648c60118297467d007703 130 Gene3D G3DSA:1.10.10.10 1 86 5.3E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_00441 482d3ca9b8648c60118297467d007703 130 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.9E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_23091 a92322d51ed9d62a8a58b1494a5e25a2 150 Pfam PF02371 Transposase IS116/IS110/IS902 family 22 98 1.7E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_35001 207526deb3af31ce9e54ad31a6023684 266 SUPERFAMILY SSF69572 4 264 1.09E-81 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Y11_35001 207526deb3af31ce9e54ad31a6023684 266 Gene3D G3DSA:3.40.50.720 13 266 6.3E-94 T 13-10-2018 Y11_35001 207526deb3af31ce9e54ad31a6023684 266 Pfam PF00899 ThiF family 21 259 7.7E-62 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Y11_30261 16f45f4a6fe56f0de1ba8dcbe02ddcc1 214 Gene3D G3DSA:1.10.10.10 10 115 6.6E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_30261 16f45f4a6fe56f0de1ba8dcbe02ddcc1 214 SUPERFAMILY SSF46785 16 194 3.66E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_22291 29ed335a364deb740e1cc1f6a1808214 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 18 274 2.1E-43 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_25371 19b5037719cc3e3878e038f15971db82 157 Pfam PF05926 Phage head completion protein (GPL) 19 157 1.7E-46 T 13-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 Y11_13281 19b5037719cc3e3878e038f15971db82 157 Pfam PF05926 Phage head completion protein (GPL) 19 157 1.7E-46 T 13-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 Y11_42261 0a0877c7232c5988c326abda7ffde4d5 441 Gene3D G3DSA:3.40.50.300 219 388 1.7E-48 T 13-10-2018 Y11_42261 0a0877c7232c5988c326abda7ffde4d5 441 Pfam PF00270 DEAD/DEAH box helicase 28 196 1.9E-46 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Y11_42261 0a0877c7232c5988c326abda7ffde4d5 441 SMART SM00487 23 225 4.7E-58 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Y11_42261 0a0877c7232c5988c326abda7ffde4d5 441 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Y11_42261 0a0877c7232c5988c326abda7ffde4d5 441 Pfam PF00271 Helicase conserved C-terminal domain 236 343 5.4E-26 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_42261 0a0877c7232c5988c326abda7ffde4d5 441 SMART SM00490 262 343 1.8E-27 T 13-10-2018 IPR001650 Helicase, C-terminal Y11_42261 0a0877c7232c5988c326abda7ffde4d5 441 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 427 49.403 T 13-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 Y11_42261 0a0877c7232c5988c326abda7ffde4d5 441 SUPERFAMILY SSF52540 35 354 2.91E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_42261 0a0877c7232c5988c326abda7ffde4d5 441 Gene3D G3DSA:3.40.50.300 1 212 2.0E-71 T 13-10-2018 Y11_p0811 63a20b501ddcf442829b3bbdc31ec5c4 93 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 1 92 7.2E-37 T 13-10-2018 IPR012673 Type III secretion system chaperone SycN GO:0009306 Y11_p0811 63a20b501ddcf442829b3bbdc31ec5c4 93 Gene3D G3DSA:3.30.1460.10 1 93 8.1E-40 T 13-10-2018 Y11_p0811 63a20b501ddcf442829b3bbdc31ec5c4 93 SUPERFAMILY SSF69635 2 92 4.55E-33 T 13-10-2018 Y11_25691 8d9af7b797d61e48b04b9d4dfca6f64e 268 Pfam PF00892 EamA-like transporter family 141 266 1.4E-12 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_25691 8d9af7b797d61e48b04b9d4dfca6f64e 268 Pfam PF00892 EamA-like transporter family 7 131 2.2E-13 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_25691 8d9af7b797d61e48b04b9d4dfca6f64e 268 SUPERFAMILY SSF103481 42 131 8.11E-10 T 13-10-2018 Y11_19791 08e5f6bd30bd78da7d8d411c7dd10c50 149 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 146 8.8E-24 T 13-10-2018 IPR002810 NfeD-like, C-terminal domain Y11_19791 08e5f6bd30bd78da7d8d411c7dd10c50 149 Gene3D G3DSA:2.40.50.140 83 149 1.8E-10 T 13-10-2018 Y11_19791 08e5f6bd30bd78da7d8d411c7dd10c50 149 SUPERFAMILY SSF141322 89 147 1.26E-6 T 13-10-2018 Y11_28371 6872c96ab98c57cc3e0ff4393a47693a 290 Pfam PF15644 Papain fold toxin 1, glutamine deamidase 122 225 3.1E-7 T 13-10-2018 IPR028908 Tox-PL domain Y11_p0611 ab2b348536c9860b589fc3aea2028cfb 115 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 1 115 2.7E-58 T 13-10-2018 IPR013348 Type III secretion system YscG GO:0009405 Y11_p0611 ab2b348536c9860b589fc3aea2028cfb 115 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 1 115 1.6E-60 T 13-10-2018 IPR013348 Type III secretion system YscG GO:0009405 Y11_p0611 ab2b348536c9860b589fc3aea2028cfb 115 Gene3D G3DSA:1.25.40.10 1 115 1.4E-59 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_04541 8e51974a7876c52fbb0a7831a38629e8 405 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 1 391 7.9E-153 T 13-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type Y11_04541 8e51974a7876c52fbb0a7831a38629e8 405 Pfam PF04403 Paraquat-inducible protein A 236 392 9.3E-54 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like Y11_04541 8e51974a7876c52fbb0a7831a38629e8 405 Pfam PF04403 Paraquat-inducible protein A 33 183 4.6E-40 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like Y11_17201 9979081cd71ee31f5e0ea7b64ad15bb7 388 Pfam PF04235 Protein of unknown function (DUF418) 216 374 1.5E-46 T 13-10-2018 IPR007349 Domain of unknown function DUF418 Y11_15881 96a3c9f6fa27bd6bb07c013b7686d980 129 Gene3D G3DSA:1.20.1250.20 1 127 1.0E-11 T 13-10-2018 Y11_15881 96a3c9f6fa27bd6bb07c013b7686d980 129 SUPERFAMILY SSF103473 2 118 2.09E-11 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_15881 96a3c9f6fa27bd6bb07c013b7686d980 129 Pfam PF03825 Nucleoside H+ symporter 1 119 5.0E-42 T 13-10-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 Y11_09281 c814431aebe2de7414ec04e56b27405d 264 SUPERFAMILY SSF54001 28 264 1.08E-77 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Y11_09281 c814431aebe2de7414ec04e56b27405d 264 Pfam PF07313 Protein of unknown function (DUF1460) 59 256 5.2E-76 T 13-10-2018 IPR010846 Protein of unknown function DUF1460 Y11_09281 c814431aebe2de7414ec04e56b27405d 264 Gene3D G3DSA:2.30.260.10 146 260 1.4E-44 T 13-10-2018 Y11_09281 c814431aebe2de7414ec04e56b27405d 264 Gene3D G3DSA:1.10.3670.10 63 180 1.4E-44 T 13-10-2018 Y11_01261 188981fd49a0b57480ff4dd3f4d00c89 208 Gene3D G3DSA:1.10.10.10 36 149 5.3E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_01261 188981fd49a0b57480ff4dd3f4d00c89 208 Pfam PF03551 Transcriptional regulator PadR-like family 55 124 2.9E-20 T 13-10-2018 IPR005149 Transcription regulator PadR, N-terminal Y11_01261 188981fd49a0b57480ff4dd3f4d00c89 208 SUPERFAMILY SSF46785 50 178 1.28E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_07531 a87e5afe38bbfafd80355a90d716c7b1 430 Gene3D G3DSA:3.40.190.10 139 415 4.2E-165 T 13-10-2018 Y11_07531 a87e5afe38bbfafd80355a90d716c7b1 430 SUPERFAMILY SSF53850 26 427 1.19E-62 T 13-10-2018 Y11_07531 a87e5afe38bbfafd80355a90d716c7b1 430 Gene3D G3DSA:3.40.190.10 30 373 4.2E-165 T 13-10-2018 Y11_07531 a87e5afe38bbfafd80355a90d716c7b1 430 Pfam PF13416 Bacterial extracellular solute-binding protein 47 354 2.1E-25 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein Y11_27481 17a718660b34f12fb3b266562b37143b 442 Pfam PF07804 HipA-like C-terminal domain 155 406 9.9E-49 T 13-10-2018 IPR012893 HipA-like, C-terminal Y11_27481 17a718660b34f12fb3b266562b37143b 442 Pfam PF13657 HipA N-terminal domain 8 108 8.1E-22 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 Y11_27481 17a718660b34f12fb3b266562b37143b 442 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 8 108 9.3E-29 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 Y11_29311 7116e16d957fbdd9c0fd1d295cba24fa 275 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 1 267 22.6 T 13-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial Y11_29311 7116e16d957fbdd9c0fd1d295cba24fa 275 Pfam PF03631 Virulence factor BrkB 8 255 3.9E-54 T 13-10-2018 IPR017039 Virulence factor BrkB Y11_29311 7116e16d957fbdd9c0fd1d295cba24fa 275 PIRSF PIRSF035875 1 274 8.1E-60 T 13-10-2018 IPR017039 Virulence factor BrkB Y11_29311 7116e16d957fbdd9c0fd1d295cba24fa 275 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 2 256 7.1E-90 T 13-10-2018 IPR017039 Virulence factor BrkB Y11_02821 0d8c29c10aa5cb7a3bdfdabce38bf986 80 Gene3D G3DSA:3.30.910.10 1 79 4.3E-16 T 13-10-2018 IPR036687 DinI-like superfamily Y11_02821 0d8c29c10aa5cb7a3bdfdabce38bf986 80 Pfam PF06183 DinI-like family 17 76 1.5E-22 T 13-10-2018 IPR010391 DNA damage-inducible protein DinI-like Y11_02821 0d8c29c10aa5cb7a3bdfdabce38bf986 80 SUPERFAMILY SSF54857 1 78 8.63E-23 T 13-10-2018 IPR036687 DinI-like superfamily Y11_41311 dba37dfc8ca1bc4dfadf4f2970a84380 43 Gene3D G3DSA:3.30.110.70 1 43 2.7E-16 T 13-10-2018 Y11_41311 dba37dfc8ca1bc4dfadf4f2970a84380 43 Pfam PF16358 RcsF lipoprotein 1 41 7.8E-22 T 13-10-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 Y11_26411 4384821a77b8c1d90556b3da321b5b0f 186 Pfam PF02470 MlaD protein 39 116 1.2E-18 T 13-10-2018 IPR003399 Mce/MlaD Y11_26411 4384821a77b8c1d90556b3da321b5b0f 186 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 152 8.8E-54 T 13-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 Y11_20931 db082d0dddebf74d56f8eeaaf023dbfc 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 56.413 T 13-10-2018 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 Y11_20931 db082d0dddebf74d56f8eeaaf023dbfc 193 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 1.7E-30 T 13-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 Y11_20931 db082d0dddebf74d56f8eeaaf023dbfc 193 PIRSF PIRSF011489 1 193 2.0E-77 T 13-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 Y11_38631 5e6b72b2b8a34c3cf6e030653b408b3e 799 Pfam PF04453 Organic solvent tolerance protein 318 712 3.3E-106 T 13-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 Y11_38631 5e6b72b2b8a34c3cf6e030653b408b3e 799 Gene3D G3DSA:2.60.450.10 55 154 8.9E-7 T 13-10-2018 Y11_38631 5e6b72b2b8a34c3cf6e030653b408b3e 799 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 14 778 20.014 T 13-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 Y11_38631 5e6b72b2b8a34c3cf6e030653b408b3e 799 Pfam PF03968 OstA-like protein 64 204 4.4E-30 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Y11_18411 6de73973b2e72072be6d177d3df11399 350 Pfam PF00793 DAHP synthetase I family 38 338 2.3E-107 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Y11_18411 6de73973b2e72072be6d177d3df11399 350 Gene3D G3DSA:3.20.20.70 1 350 7.7E-171 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Y11_18411 6de73973b2e72072be6d177d3df11399 350 PIRSF PIRSF001361 1 350 8.3E-165 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Y11_18411 6de73973b2e72072be6d177d3df11399 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 4.8E-177 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Y11_18411 6de73973b2e72072be6d177d3df11399 350 SUPERFAMILY SSF51569 7 348 5.13E-139 T 13-10-2018 Y11_36531 457b25136e1ebb5b5b1c7c7f0e5f508c 115 SUPERFAMILY SSF46955 3 73 2.11E-23 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Y11_36531 457b25136e1ebb5b5b1c7c7f0e5f508c 115 Gene3D G3DSA:1.10.10.10 2 74 1.0E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_36531 457b25136e1ebb5b5b1c7c7f0e5f508c 115 Pfam PF02316 Mu DNA-binding domain 9 61 1.9E-14 T 13-10-2018 IPR003314 Mu-type HTH domain GO:0003677 Y11_36531 457b25136e1ebb5b5b1c7c7f0e5f508c 115 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 10 112 0.009 T 13-10-2018 IPR010749 Protein of unknown function DUF1323 Y11_22311 24860a302eb0a1d63de926a74c5d71e4 244 SUPERFAMILY SSF52540 8 240 3.59E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_22311 24860a302eb0a1d63de926a74c5d71e4 244 Gene3D G3DSA:3.40.50.300 5 243 2.5E-56 T 13-10-2018 Y11_22311 24860a302eb0a1d63de926a74c5d71e4 244 Pfam PF00005 ABC transporter 26 171 9.5E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_35931 af50826102eb748d78d1b0d9fa12b8ec 43 Pfam PF08085 Entericidin EcnA/B family 22 42 7.7E-11 T 13-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 Y11_04321 8398847c6d29a48daaabd50d17d66127 297 Gene3D G3DSA:3.90.1200.10 105 293 1.1E-10 T 13-10-2018 Y11_04321 8398847c6d29a48daaabd50d17d66127 297 SUPERFAMILY SSF56112 14 268 2.65E-18 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Y11_04321 8398847c6d29a48daaabd50d17d66127 297 Pfam PF03881 Fructosamine kinase 26 276 7.7E-10 T 13-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 Y11_p0871 0bc0ed0a96935bc1961a51fb7375677a 324 PRINTS PR01592 Low calcium response V antigen signature 108 126 3.1E-126 T 13-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 Y11_p0871 0bc0ed0a96935bc1961a51fb7375677a 324 PRINTS PR01592 Low calcium response V antigen signature 257 278 3.1E-126 T 13-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 Y11_p0871 0bc0ed0a96935bc1961a51fb7375677a 324 PRINTS PR01592 Low calcium response V antigen signature 235 255 3.1E-126 T 13-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 Y11_p0871 0bc0ed0a96935bc1961a51fb7375677a 324 PRINTS PR01592 Low calcium response V antigen signature 178 201 3.1E-126 T 13-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 Y11_p0871 0bc0ed0a96935bc1961a51fb7375677a 324 PRINTS PR01592 Low calcium response V antigen signature 298 320 3.1E-126 T 13-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 Y11_p0871 0bc0ed0a96935bc1961a51fb7375677a 324 PRINTS PR01592 Low calcium response V antigen signature 279 298 3.1E-126 T 13-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 Y11_p0871 0bc0ed0a96935bc1961a51fb7375677a 324 PRINTS PR01592 Low calcium response V antigen signature 33 58 3.1E-126 T 13-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 Y11_p0871 0bc0ed0a96935bc1961a51fb7375677a 324 PRINTS PR01592 Low calcium response V antigen signature 130 150 3.1E-126 T 13-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 Y11_p0871 0bc0ed0a96935bc1961a51fb7375677a 324 PRINTS PR01592 Low calcium response V antigen signature 153 175 3.1E-126 T 13-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 Y11_p0871 0bc0ed0a96935bc1961a51fb7375677a 324 SUPERFAMILY SSF103388 29 321 4.05E-127 T 13-10-2018 IPR036139 Virulence-associated V antigen superfamily GO:0005576|GO:0009405 Y11_p0871 0bc0ed0a96935bc1961a51fb7375677a 324 Pfam PF04792 V antigen (LcrV) protein 1 323 2.3E-191 T 13-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 Y11_09531 7de418670f23848c8248ea44d9e7f7ca 365 SUPERFAMILY SSF53187 16 357 5.95E-43 T 13-10-2018 Y11_09531 7de418670f23848c8248ea44d9e7f7ca 365 Gene3D G3DSA:3.40.630.10 2 278 2.3E-78 T 13-10-2018 Y11_09531 7de418670f23848c8248ea44d9e7f7ca 365 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 30 352 7.9E-31 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Y11_11081 17fb616e2b984f3f2317cf69cd8d850c 300 Pfam PF01734 Patatin-like phospholipase 8 167 1.8E-23 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Y11_11081 17fb616e2b984f3f2317cf69cd8d850c 300 Gene3D G3DSA:3.40.1090.10 104 210 3.2E-15 T 13-10-2018 Y11_11081 17fb616e2b984f3f2317cf69cd8d850c 300 Gene3D G3DSA:3.40.1090.10 1 103 2.2E-22 T 13-10-2018 Y11_11081 17fb616e2b984f3f2317cf69cd8d850c 300 SUPERFAMILY SSF52151 1 288 4.19E-58 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Y11_08941 41cddd4d101d251704fa7b391ff83755 56 Pfam PF13617 YnbE-like lipoprotein 2 54 1.2E-25 T 13-10-2018 IPR025985 YnbE-like lipoprotein Y11_08941 41cddd4d101d251704fa7b391ff83755 56 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 10 56 2.0E-19 T 13-10-2018 Y11_03861 e9e21f3d2656f11a32d3a252f46db855 299 Pfam PF03956 Lysine exporter LysO 113 297 6.0E-56 T 13-10-2018 IPR005642 Lysine exporter LysO Y11_03861 e9e21f3d2656f11a32d3a252f46db855 299 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 137 296 2.0E-72 T 13-10-2018 IPR005642 Lysine exporter LysO Y11_29881 dbc6f767ac70bcbfd5fd62c6ba495536 251 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 116 2.9E-16 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Y11_29881 dbc6f767ac70bcbfd5fd62c6ba495536 251 Gene3D G3DSA:1.10.3720.10 22 227 3.6E-45 T 13-10-2018 IPR035906 MetI-like superfamily Y11_29881 dbc6f767ac70bcbfd5fd62c6ba495536 251 SUPERFAMILY SSF161098 22 209 9.42E-41 T 13-10-2018 IPR035906 MetI-like superfamily Y11_29881 dbc6f767ac70bcbfd5fd62c6ba495536 251 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 223 4.1E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_01711 6176c08f5f13b6e9eb358ce2c105d68c 166 Gene3D G3DSA:3.40.30.10 22 157 9.0E-25 T 13-10-2018 Y11_01711 6176c08f5f13b6e9eb358ce2c105d68c 166 SUPERFAMILY SSF52833 36 157 1.56E-27 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_01711 6176c08f5f13b6e9eb358ce2c105d68c 166 Pfam PF00578 AhpC/TSA family 38 139 1.3E-15 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Y11_12381 f6ed1e218e832a2010948e2b273f0521 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.317 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Y11_12381 f6ed1e218e832a2010948e2b273f0521 511 PIRSF PIRSF002869 1 511 1.1E-178 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Y11_12381 f6ed1e218e832a2010948e2b273f0521 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 506 6.6E-166 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Y11_12381 f6ed1e218e832a2010948e2b273f0521 511 Pfam PF03023 MviN-like protein 28 477 3.7E-153 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Y11_12381 f6ed1e218e832a2010948e2b273f0521 511 PRINTS PR01806 Virulence factor MviN signature 33 52 1.1E-86 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Y11_12381 f6ed1e218e832a2010948e2b273f0521 511 PRINTS PR01806 Virulence factor MviN signature 357 376 1.1E-86 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Y11_12381 f6ed1e218e832a2010948e2b273f0521 511 PRINTS PR01806 Virulence factor MviN signature 52 68 1.1E-86 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Y11_12381 f6ed1e218e832a2010948e2b273f0521 511 PRINTS PR01806 Virulence factor MviN signature 133 157 1.1E-86 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Y11_12381 f6ed1e218e832a2010948e2b273f0521 511 PRINTS PR01806 Virulence factor MviN signature 409 426 1.1E-86 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Y11_12381 f6ed1e218e832a2010948e2b273f0521 511 PRINTS PR01806 Virulence factor MviN signature 259 285 1.1E-86 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Y11_12381 f6ed1e218e832a2010948e2b273f0521 511 PRINTS PR01806 Virulence factor MviN signature 157 178 1.1E-86 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Y11_34321 df2f5b7273816592a9d9307cb2641628 418 Gene3D G3DSA:3.40.50.2300 192 320 2.7E-116 T 13-10-2018 Y11_34321 df2f5b7273816592a9d9307cb2641628 418 Pfam PF13458 Periplasmic binding protein 74 408 1.3E-60 T 13-10-2018 IPR028081 Leucine-binding protein domain Y11_34321 df2f5b7273816592a9d9307cb2641628 418 SUPERFAMILY SSF53822 72 415 5.05E-88 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_34321 df2f5b7273816592a9d9307cb2641628 418 Gene3D G3DSA:3.40.50.2300 75 394 2.7E-116 T 13-10-2018 Y11_34321 df2f5b7273816592a9d9307cb2641628 418 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 96 112 7.6E-62 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Y11_34321 df2f5b7273816592a9d9307cb2641628 418 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 302 320 7.6E-62 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Y11_34321 df2f5b7273816592a9d9307cb2641628 418 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 74 90 7.6E-62 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Y11_34321 df2f5b7273816592a9d9307cb2641628 418 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 325 338 7.6E-62 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Y11_34321 df2f5b7273816592a9d9307cb2641628 418 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 378 393 7.6E-62 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Y11_34321 df2f5b7273816592a9d9307cb2641628 418 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 115 133 7.6E-62 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Y11_34321 df2f5b7273816592a9d9307cb2641628 418 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 136 146 7.6E-62 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Y11_05621 51993ee40a7b8deb15279fe1306e6333 207 Pfam PF13505 Outer membrane protein beta-barrel domain 7 187 2.4E-9 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel Y11_05621 51993ee40a7b8deb15279fe1306e6333 207 SUPERFAMILY SSF56925 20 207 1.36E-10 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Y11_06111 9ceea59fe80a27bdb3e52778b45cf1d4 77 Pfam PF13996 YobH-like protein 3 70 1.3E-35 T 13-10-2018 IPR025611 YobH-like protein Y11_32671 08580e15f160a8bad5b013dfa8558c3e 282 Gene3D G3DSA:3.60.130.10 1 282 3.3E-99 T 13-10-2018 Y11_32671 08580e15f160a8bad5b013dfa8558c3e 282 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 272 1.4E-66 T 13-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 Y11_32671 08580e15f160a8bad5b013dfa8558c3e 282 SUPERFAMILY SSF51197 7 281 1.14E-96 T 13-10-2018 Y11_08991 83b14ce7a1048f658757ad5300a03206 107 SMART SM00530 41 96 4.7E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_08991 83b14ce7a1048f658757ad5300a03206 107 SUPERFAMILY SSF47413 29 101 2.47E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_08991 83b14ce7a1048f658757ad5300a03206 107 Gene3D G3DSA:1.10.260.40 21 99 2.6E-16 T 13-10-2018 Y11_08991 83b14ce7a1048f658757ad5300a03206 107 Pfam PF01381 Helix-turn-helix 42 93 6.0E-14 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_14491 47727630e2334e35ebb99163563f2332 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_14491 47727630e2334e35ebb99163563f2332 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_29181 06890ca262f4079d9316d6b9037b7135 219 Gene3D G3DSA:3.40.1280.10 1 193 9.4E-61 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Y11_29181 06890ca262f4079d9316d6b9037b7135 219 Pfam PF12105 SpoU, rRNA methylase, C-terminal 152 207 9.3E-25 T 13-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 Y11_29181 06890ca262f4079d9316d6b9037b7135 219 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 1 186 32.596 T 13-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 Y11_29181 06890ca262f4079d9316d6b9037b7135 219 SUPERFAMILY SSF75217 3 172 6.54E-48 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Y11_29181 06890ca262f4079d9316d6b9037b7135 219 Pfam PF00588 SpoU rRNA Methylase family 9 148 3.6E-35 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Y11_33381 f2fcbeb350f3aeb780b96d73342a182b 112 Pfam PF04219 Protein of unknown function, DUF 10 98 3.3E-39 T 13-10-2018 IPR007335 Protein of unknown function DUF413 Y11_41301 8cc4e6b4bcb05b9114d2dbe766305b62 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 13-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site Y11_41301 8cc4e6b4bcb05b9114d2dbe766305b62 235 Gene3D G3DSA:2.40.30.70 25 147 2.5E-48 T 13-10-2018 IPR036414 YaeB, N-terminal domain superfamily Y11_41301 8cc4e6b4bcb05b9114d2dbe766305b62 235 SUPERFAMILY SSF118196 1 230 8.24E-85 T 13-10-2018 IPR036413 YaeB-like superfamily Y11_41301 8cc4e6b4bcb05b9114d2dbe766305b62 235 Gene3D G3DSA:3.30.2310.10 148 231 3.7E-22 T 13-10-2018 Y11_41301 8cc4e6b4bcb05b9114d2dbe766305b62 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 2.0E-39 T 13-10-2018 IPR023370 YaeB-like, N-terminal domain Y11_41301 8cc4e6b4bcb05b9114d2dbe766305b62 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 149 9.3E-58 T 13-10-2018 IPR023370 YaeB-like, N-terminal domain Y11_12921 9b2c189e29058ff910da681237625d80 93 Pfam PF12571 Phage tail-collar fibre protein 1 92 1.2E-33 T 13-10-2018 IPR022225 Phage tail fibre protein Y11_28421 b78eaaf796804e5241df88a39e5e625e 382 SUPERFAMILY SSF69279 9 181 4.48E-24 T 13-10-2018 Y11_28421 b78eaaf796804e5241df88a39e5e625e 382 Pfam PF05954 Phage late control gene D protein (GPD) 38 357 9.3E-39 T 13-10-2018 Y11_42421 ae12c03ac93151be221beb05cf86eb18 280 Gene3D G3DSA:3.40.50.10490 95 280 1.8E-42 T 13-10-2018 Y11_42421 ae12c03ac93151be221beb05cf86eb18 280 Pfam PF01380 SIS domain 126 255 1.9E-28 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Y11_42421 ae12c03ac93151be221beb05cf86eb18 280 SUPERFAMILY SSF53697 98 276 5.26E-38 T 13-10-2018 Y11_42421 ae12c03ac93151be221beb05cf86eb18 280 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 75 6.7E-24 T 13-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Y11_42421 ae12c03ac93151be221beb05cf86eb18 280 SUPERFAMILY SSF46689 1 73 3.05E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Y11_42421 ae12c03ac93151be221beb05cf86eb18 280 Gene3D G3DSA:1.10.10.10 1 75 3.8E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_26051 3887d3655149ce291529eb63fa12de53 389 Gene3D G3DSA:2.60.40.3310 34 222 8.4E-12 T 13-10-2018 Y11_26051 3887d3655149ce291529eb63fa12de53 389 Gene3D G3DSA:2.60.40.1090 223 388 1.4E-23 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Y11_26051 3887d3655149ce291529eb63fa12de53 389 SUPERFAMILY SSF49401 219 388 2.49E-15 T 13-10-2018 IPR008966 Adhesion domain superfamily Y11_07491 0b6b6b4ef5fae61e6623b96575b1e7e5 222 SUPERFAMILY SSF118215 2 201 3.14E-53 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Y11_07491 0b6b6b4ef5fae61e6623b96575b1e7e5 222 Pfam PF00375 Sodium:dicarboxylate symporter family 2 201 2.9E-57 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Y11_07491 0b6b6b4ef5fae61e6623b96575b1e7e5 222 Gene3D G3DSA:1.10.3860.10 1 218 1.2E-60 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Y11_43001 a2ac5387b305d2b90117f5bcb4128a42 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 68 2.0E-27 T 13-10-2018 IPR010807 Protein of unknown function DUF1407 Y11_43001 a2ac5387b305d2b90117f5bcb4128a42 74 Gene3D G3DSA:2.10.290.10 1 71 1.3E-26 T 13-10-2018 IPR029037 YfgJ-like Y11_43001 a2ac5387b305d2b90117f5bcb4128a42 74 SUPERFAMILY SSF161187 1 70 5.62E-27 T 13-10-2018 Y11_43001 a2ac5387b305d2b90117f5bcb4128a42 74 Pfam PF07191 zinc-ribbons 4 68 4.2E-27 T 13-10-2018 IPR010807 Protein of unknown function DUF1407 Y11_15591 a64b77cfe019d6fffd7ee7e48618fa2b 159 SUPERFAMILY SSF160719 72 144 1.29E-11 T 13-10-2018 Y11_15591 a64b77cfe019d6fffd7ee7e48618fa2b 159 Pfam PF04965 Gene 25-like lysozyme 36 136 1.6E-17 T 13-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD Y11_34671 5b0111316432d02c769b1b57aca65794 218 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 140 19.654 T 13-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Y11_34671 5b0111316432d02c769b1b57aca65794 218 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.2E-32 T 13-10-2018 Y11_34671 5b0111316432d02c769b1b57aca65794 218 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.2E-32 T 13-10-2018 Y11_34671 5b0111316432d02c769b1b57aca65794 218 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.2E-32 T 13-10-2018 Y11_34671 5b0111316432d02c769b1b57aca65794 218 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 6.2E-32 T 13-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Y11_36871 98bd685b476b022b8df75f00c262edb5 97 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 3 95 31.594 T 13-10-2018 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease Y11_36871 98bd685b476b022b8df75f00c262edb5 97 Gene3D G3DSA:3.40.1440.10 2 96 5.4E-28 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Y11_36871 98bd685b476b022b8df75f00c262edb5 97 Pfam PF01541 GIY-YIG catalytic domain 6 77 9.4E-13 T 13-10-2018 IPR000305 GIY-YIG endonuclease Y11_36871 98bd685b476b022b8df75f00c262edb5 97 SUPERFAMILY SSF82771 5 76 5.23E-12 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Y11_27291 72f9ba88ce9852eaa28b4df20400dc26 70 PIRSF PIRSF002599 1 70 4.8E-24 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 Y11_27291 72f9ba88ce9852eaa28b4df20400dc26 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 13-10-2018 IPR019844 Cold-shock conserved site Y11_27291 72f9ba88ce9852eaa28b4df20400dc26 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.1E-32 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_27291 72f9ba88ce9852eaa28b4df20400dc26 70 PRINTS PR00050 Cold shock protein signature 7 22 1.0E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_27291 72f9ba88ce9852eaa28b4df20400dc26 70 PRINTS PR00050 Cold shock protein signature 43 61 1.0E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_27291 72f9ba88ce9852eaa28b4df20400dc26 70 PRINTS PR00050 Cold shock protein signature 28 37 1.0E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Y11_27291 72f9ba88ce9852eaa28b4df20400dc26 70 SUPERFAMILY SSF50249 3 69 2.57E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Y11_27291 72f9ba88ce9852eaa28b4df20400dc26 70 Gene3D G3DSA:2.40.50.140 2 69 1.9E-29 T 13-10-2018 Y11_27291 72f9ba88ce9852eaa28b4df20400dc26 70 SMART SM00357 6 70 1.5E-32 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Y11_25391 4d44af47f316ce9f1543bc26142647ad 383 Pfam PF05125 Phage major capsid protein, P2 family 8 340 2.7E-141 T 13-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid Y11_25391 4d44af47f316ce9f1543bc26142647ad 383 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 9 342 9.8E-90 T 13-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid Y11_13261 4d44af47f316ce9f1543bc26142647ad 383 Pfam PF05125 Phage major capsid protein, P2 family 8 340 2.7E-141 T 13-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid Y11_13261 4d44af47f316ce9f1543bc26142647ad 383 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 9 342 9.8E-90 T 13-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid Y11_27891 87bd69617dd47ef3d3dbedebcaf896f2 240 Pfam PF01177 Asp/Glu/Hydantoin racemase 24 192 2.5E-24 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Y11_27891 87bd69617dd47ef3d3dbedebcaf896f2 240 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 46 54 - T 13-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Y11_27891 87bd69617dd47ef3d3dbedebcaf896f2 240 Gene3D G3DSA:3.40.50.1860 1 218 3.3E-79 T 13-10-2018 Y11_27891 87bd69617dd47ef3d3dbedebcaf896f2 240 Gene3D G3DSA:3.40.50.1860 71 184 3.3E-79 T 13-10-2018 Y11_27891 87bd69617dd47ef3d3dbedebcaf896f2 240 SUPERFAMILY SSF53681 1 82 7.68E-21 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Y11_27891 87bd69617dd47ef3d3dbedebcaf896f2 240 Hamap MF_00258 Glutamate racemase [murI]. 1 231 26.033 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Y11_27891 87bd69617dd47ef3d3dbedebcaf896f2 240 TIGRFAM TIGR00067 glut_race: glutamate racemase 1 225 2.6E-73 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Y11_27891 87bd69617dd47ef3d3dbedebcaf896f2 240 SUPERFAMILY SSF53681 84 236 4.8E-34 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Y11_27891 87bd69617dd47ef3d3dbedebcaf896f2 240 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 157 167 - T 13-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Y11_14221 440c03c51530d0c779a43e2b168a2b40 240 PRINTS PR01003 Flagellar assembly protein FliH signature 196 212 3.7E-78 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Y11_14221 440c03c51530d0c779a43e2b168a2b40 240 PRINTS PR01003 Flagellar assembly protein FliH signature 127 144 3.7E-78 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Y11_14221 440c03c51530d0c779a43e2b168a2b40 240 PRINTS PR01003 Flagellar assembly protein FliH signature 65 87 3.7E-78 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Y11_14221 440c03c51530d0c779a43e2b168a2b40 240 PRINTS PR01003 Flagellar assembly protein FliH signature 8 27 3.7E-78 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Y11_14221 440c03c51530d0c779a43e2b168a2b40 240 PRINTS PR01003 Flagellar assembly protein FliH signature 145 167 3.7E-78 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Y11_14221 440c03c51530d0c779a43e2b168a2b40 240 PRINTS PR01003 Flagellar assembly protein FliH signature 88 106 3.7E-78 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Y11_14221 440c03c51530d0c779a43e2b168a2b40 240 PRINTS PR01003 Flagellar assembly protein FliH signature 213 238 3.7E-78 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Y11_14221 440c03c51530d0c779a43e2b168a2b40 240 PRINTS PR01003 Flagellar assembly protein FliH signature 107 126 3.7E-78 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Y11_14221 440c03c51530d0c779a43e2b168a2b40 240 PRINTS PR01003 Flagellar assembly protein FliH signature 168 195 3.7E-78 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Y11_14221 440c03c51530d0c779a43e2b168a2b40 240 Pfam PF02108 Flagellar assembly protein FliH 107 231 1.6E-39 T 13-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Y11_26771 97e8b4ab714d66a2994d661950f5f42f 258 Pfam PF14188 Domain of unknown function (DUF4311) 25 236 3.2E-122 T 13-10-2018 IPR020042 Protein of unknown function DUF4311 Y11_26771 97e8b4ab714d66a2994d661950f5f42f 258 TIGRFAM TIGR03580 EF_0832: conserved hypothetical protein EF_0832/AHA_3913 2 258 2.2E-152 T 13-10-2018 IPR020042 Protein of unknown function DUF4311 Y11_22881 fb6d9fc5370be48213746a0102d058d7 66 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 5 63 9.1E-13 T 13-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 Y11_22881 fb6d9fc5370be48213746a0102d058d7 66 Gene3D G3DSA:3.30.920.30 1 65 1.6E-17 T 13-10-2018 IPR038570 HicA superfamily Y11_22881 fb6d9fc5370be48213746a0102d058d7 66 SUPERFAMILY SSF54786 1 64 1.41E-11 T 13-10-2018 Y11_40981 189c94dfcc0ab9a495312cea76c5f2f3 129 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.45 T 13-10-2018 IPR020911 Uncharacterised protein family UPF0325 Y11_40981 189c94dfcc0ab9a495312cea76c5f2f3 129 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 1.0E-66 T 13-10-2018 IPR020911 Uncharacterised protein family UPF0325 Y11_40981 189c94dfcc0ab9a495312cea76c5f2f3 129 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 5.0E-55 T 13-10-2018 IPR020911 Uncharacterised protein family UPF0325 Y11_23231 e24b58e1515b86242bfba3b5d3c8f31f 139 Pfam PF04143 Sulphur transport 43 130 6.2E-7 T 13-10-2018 IPR007272 Sulphur transport domain Y11_05451 da7a27cfca899716cf73c0da376b27f6 129 Pfam PF07233 Protein of unknown function (DUF1425) 38 127 7.7E-27 T 13-10-2018 IPR010824 Protein of unknown function DUF1425 Y11_05451 da7a27cfca899716cf73c0da376b27f6 129 Gene3D G3DSA:2.60.40.3230 24 128 6.5E-23 T 13-10-2018 IPR038483 YcfL-like superfamily Y11_39381 760b74823f0270f4e69babae72e72f2d 295 SUPERFAMILY SSF103481 45 139 9.55E-8 T 13-10-2018 Y11_39381 760b74823f0270f4e69babae72e72f2d 295 Pfam PF00892 EamA-like transporter family 157 284 1.3E-13 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_39381 760b74823f0270f4e69babae72e72f2d 295 SUPERFAMILY SSF103481 189 289 2.62E-12 T 13-10-2018 Y11_03051 2c1ed3d4df08c6321e923827dc114dff 366 Gene3D G3DSA:1.10.3720.10 123 355 2.5E-18 T 13-10-2018 IPR035906 MetI-like superfamily Y11_03051 2c1ed3d4df08c6321e923827dc114dff 366 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 153 360 3.7E-39 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_03051 2c1ed3d4df08c6321e923827dc114dff 366 SUPERFAMILY SSF161098 130 347 6.41E-15 T 13-10-2018 IPR035906 MetI-like superfamily Y11_36161 805dcf9786f403e49c65127ae06768aa 66 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 1.1E-21 T 13-10-2018 IPR019201 Protein of unknown function DUF2065 Y11_00661 9a745e1cde7657421de770a6c30d3bf2 389 Pfam PF02687 FtsX-like permease family 294 382 2.5E-10 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Y11_00661 9a745e1cde7657421de770a6c30d3bf2 389 Pfam PF12704 MacB-like periplasmic core domain 13 232 5.2E-40 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Y11_23261 6a901a795490f93a665c7b38e1df3f5e 188 Pfam PF17283 SprT-like zinc ribbon domain 143 183 7.9E-10 T 13-10-2018 IPR035240 SprT-like, zinc ribbon domain Y11_23261 6a901a795490f93a665c7b38e1df3f5e 188 Pfam PF10263 SprT-like family 40 137 2.0E-16 T 13-10-2018 IPR006640 SprT-like Y11_23261 6a901a795490f93a665c7b38e1df3f5e 188 Hamap MF_00746 Protein SprT [sprT]. 30 183 41.53 T 13-10-2018 IPR023483 Uncharacterised protein family SprT Y11_23261 6a901a795490f93a665c7b38e1df3f5e 188 SMART SM00731 34 183 3.5E-64 T 13-10-2018 IPR006640 SprT-like Y11_30971 2ce2490d3735496dee7eca39b66c1949 487 Gene3D G3DSA:3.40.50.1820 107 347 7.4E-29 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_30971 2ce2490d3735496dee7eca39b66c1949 487 SUPERFAMILY SSF53474 75 342 3.3E-25 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_30971 2ce2490d3735496dee7eca39b66c1949 487 Pfam PF12146 Serine aminopeptidase, S33 118 238 3.4E-11 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 Y11_15361 9f010670a331e75b6089a1422c31659d 97 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 80 4.0E-26 T 13-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 Y11_15361 9f010670a331e75b6089a1422c31659d 97 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 1.5E-29 T 13-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 Y11_15361 9f010670a331e75b6089a1422c31659d 97 PIRSF PIRSF002736 1 97 3.2E-37 T 13-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 Y11_15361 9f010670a331e75b6089a1422c31659d 97 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 25.529 T 13-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 Y11_15361 9f010670a331e75b6089a1422c31659d 97 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 86 9.1E-28 T 13-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein Y11_11321 f831ed612fec6d5c4bc5b259a3c45592 256 SUPERFAMILY SSF56935 31 255 8.42E-5 T 13-10-2018 Y11_11321 f831ed612fec6d5c4bc5b259a3c45592 256 Pfam PF06629 MltA-interacting protein MipA 35 255 6.2E-55 T 13-10-2018 IPR010583 MltA-interacting MipA Y11_04401 4a64085c9f4696cc93bf989aab306388 182 Gene3D G3DSA:3.30.1380.10 61 182 1.7E-10 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Y11_04401 4a64085c9f4696cc93bf989aab306388 182 SUPERFAMILY SSF55166 66 182 1.94E-32 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Y11_04401 4a64085c9f4696cc93bf989aab306388 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 6.4E-61 T 13-10-2018 IPR010275 Protein of unknown function DUF882 Y11_26241 0d77111963516381cd5f7e34be988ad9 300 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 295 1.5E-132 T 13-10-2018 IPR005911 Protein YhcC-like GO:0051536 Y11_26241 0d77111963516381cd5f7e34be988ad9 300 SMART SM00729 23 247 2.4E-40 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Y11_26241 0d77111963516381cd5f7e34be988ad9 300 Pfam PF04055 Radical SAM superfamily 43 202 1.1E-16 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Y11_26241 0d77111963516381cd5f7e34be988ad9 300 Pfam PF16199 Radical_SAM C-terminal domain 208 283 8.7E-18 T 13-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 Y11_26241 0d77111963516381cd5f7e34be988ad9 300 Gene3D G3DSA:3.80.30.20 42 290 3.6E-17 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Y11_26241 0d77111963516381cd5f7e34be988ad9 300 SUPERFAMILY SSF102114 13 267 2.35E-45 T 13-10-2018 Y11_35471 e595545ec4344e5a63d0a9c341bbe849 128 Pfam PF01311 Bacterial export proteins, family 1 10 127 6.9E-22 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Y11_35471 e595545ec4344e5a63d0a9c341bbe849 128 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 17 38 2.7E-10 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Y11_35471 e595545ec4344e5a63d0a9c341bbe849 128 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 78 97 2.7E-10 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Y11_12951 892100887d6cdc18468b4bdcaa33b112 87 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 3 87 1.2E-19 T 13-10-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly Y11_42791 bc228ae0dddf13531925de98ef44c926 295 Pfam PF07179 SseB protein N-terminal domain 22 154 9.3E-31 T 13-10-2018 IPR009839 SseB protein N-terminal domain Y11_42791 bc228ae0dddf13531925de98ef44c926 295 Pfam PF14581 SseB protein C-terminal domain 170 280 1.3E-33 T 13-10-2018 IPR027945 SseB protein, C-terminal Y11_39331 5d5991397f718999c3e700017d5b949d 448 SUPERFAMILY SSF56399 255 429 2.01E-11 T 13-10-2018 Y11_39331 5d5991397f718999c3e700017d5b949d 448 Pfam PF03496 ADP-ribosyltransferase exoenzyme 256 411 7.3E-6 T 13-10-2018 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 Y11_39331 5d5991397f718999c3e700017d5b949d 448 Gene3D G3DSA:3.90.176.10 166 431 2.6E-22 T 13-10-2018 Y11_p0151 a9baadefd7f07d036e901f5b40cbe2ec 132 Gene3D G3DSA:3.30.420.10 27 131 1.5E-10 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_p0151 a9baadefd7f07d036e901f5b40cbe2ec 132 Pfam PF00665 Integrase core domain 29 127 1.9E-14 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_p0151 a9baadefd7f07d036e901f5b40cbe2ec 132 SUPERFAMILY SSF53098 25 127 4.25E-21 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_40801 eac3ab3304c728511a9b218b2a9a80ad 416 Gene3D G3DSA:3.40.630.40 175 415 1.5E-90 T 13-10-2018 Y11_40801 eac3ab3304c728511a9b218b2a9a80ad 416 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 190 404 1.4E-51 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Y11_40801 eac3ab3304c728511a9b218b2a9a80ad 416 SUPERFAMILY SSF53187 188 407 1.63E-54 T 13-10-2018 Y11_40801 eac3ab3304c728511a9b218b2a9a80ad 416 Gene3D G3DSA:2.60.40.3500 24 145 2.7E-35 T 13-10-2018 Y11_40801 eac3ab3304c728511a9b218b2a9a80ad 416 Pfam PF11741 AMIN domain 39 142 5.3E-28 T 13-10-2018 IPR021731 AMIN domain Y11_40801 eac3ab3304c728511a9b218b2a9a80ad 416 SMART SM00646 250 404 5.7E-64 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Y11_21391 05a056094f3239c663ff238f1e212b61 75 Pfam PF04400 (Na+)-NQR maturation NqrM 23 65 1.4E-22 T 13-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM Y11_39731 4fa056c3c7671c7e0acbd3e10b8e4c1d 233 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 46.953 T 13-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Y11_39731 4fa056c3c7671c7e0acbd3e10b8e4c1d 233 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 1.4E-115 T 13-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Y11_39731 4fa056c3c7671c7e0acbd3e10b8e4c1d 233 SUPERFAMILY SSF53167 1 227 3.01E-74 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Y11_39731 4fa056c3c7671c7e0acbd3e10b8e4c1d 233 Pfam PF01048 Phosphorylase superfamily 2 226 3.0E-48 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Y11_39731 4fa056c3c7671c7e0acbd3e10b8e4c1d 233 Gene3D G3DSA:3.40.50.1580 1 232 1.0E-68 T 13-10-2018 Y11_25951 406dc89a4e5e07160770f72ce408f064 131 Pfam PF07681 DoxX 8 88 4.2E-16 T 13-10-2018 IPR032808 DoxX family Y11_19501 207a2bbc71045e2d5d10fb9c4b9c5f83 92 Pfam PF02098 Tick histamine binding protein 11 85 2.1E-4 T 13-10-2018 IPR002970 Tick histamine-binding protein GO:0030682|GO:0043176 Y11_31741 3b9779ccd07657533275d237b2ed9a15 231 Gene3D G3DSA:2.60.120.10 11 135 2.1E-99 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_31741 3b9779ccd07657533275d237b2ed9a15 231 PIRSF PIRSF006232 1 230 1.2E-55 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Y11_31741 3b9779ccd07657533275d237b2ed9a15 231 Gene3D G3DSA:2.60.120.10 7 229 2.1E-99 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_31741 3b9779ccd07657533275d237b2ed9a15 231 SUPERFAMILY SSF51182 1 231 1.9E-79 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_31741 3b9779ccd07657533275d237b2ed9a15 231 Pfam PF02678 Pirin 7 119 1.3E-37 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Y11_42981 bebbcc50564aed841543dd4f1601b48e 245 Pfam PF03547 Membrane transport protein 14 148 2.5E-9 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Y11_41961 1589bf71b16eb29ca6cbfab065596fc1 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 126 18.347 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Y11_41961 1589bf71b16eb29ca6cbfab065596fc1 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 121 3.4E-20 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Y11_13251 b0d8b55e9a8ead4e45fce5bb4c171e69 284 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 284 1.3E-110 T 13-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 Y11_25401 b0d8b55e9a8ead4e45fce5bb4c171e69 284 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 284 1.3E-110 T 13-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 Y11_20891 e4e586c8ad2016d5fc868a61ac60ce9e 144 Pfam PF02371 Transposase IS116/IS110/IS902 family 16 92 4.7E-27 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_05251 528136e9ae13b2e8c886cea401c324a2 324 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 322 6.3E-127 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Y11_05251 528136e9ae13b2e8c886cea401c324a2 324 Gene3D G3DSA:3.40.718.10 1 323 1.4E-114 T 13-10-2018 Y11_05251 528136e9ae13b2e8c886cea401c324a2 324 Pfam PF02504 Fatty acid synthesis protein 3 311 7.3E-109 T 13-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Y11_05251 528136e9ae13b2e8c886cea401c324a2 324 SUPERFAMILY SSF53659 2 320 6.58E-94 T 13-10-2018 Y11_05251 528136e9ae13b2e8c886cea401c324a2 324 PIRSF PIRSF002465 1 324 1.7E-115 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Y11_05251 528136e9ae13b2e8c886cea401c324a2 324 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 324 136.557 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Y11_12761 39908c5c119888fda81d080e419f0fde 402 Gene3D G3DSA:1.20.1250.20 12 377 8.4E-26 T 13-10-2018 Y11_12761 39908c5c119888fda81d080e419f0fde 402 Pfam PF07690 Major Facilitator Superfamily 21 193 4.3E-22 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Y11_12761 39908c5c119888fda81d080e419f0fde 402 SUPERFAMILY SSF103473 6 393 1.44E-37 T 13-10-2018 IPR036259 MFS transporter superfamily Y11_25791 1046bcb00e0aa59d1472d80ce5d6a489 328 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 8 313 8.4E-122 T 13-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 Y11_25791 1046bcb00e0aa59d1472d80ce5d6a489 328 Pfam PF03741 Integral membrane protein TerC family 81 283 1.3E-56 T 13-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 Y11_13511 5f4a30166ad24d7a60efd64796e0cbc0 71 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 3.4E-19 T 13-10-2018 IPR007684 Zinc finger, Ogr/Delta-type Y11_16031 268889e18b32e37f91f4624c8c7296b2 241 Gene3D G3DSA:3.30.950.10 111 241 1.6E-52 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Y11_16031 268889e18b32e37f91f4624c8c7296b2 241 Gene3D G3DSA:3.40.1010.10 1 110 5.0E-29 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Y11_16031 268889e18b32e37f91f4624c8c7296b2 241 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 2 239 7.2E-103 T 13-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 Y11_16031 268889e18b32e37f91f4624c8c7296b2 241 SUPERFAMILY SSF53790 1 239 7.85E-54 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Y11_16031 268889e18b32e37f91f4624c8c7296b2 241 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 208 1.1E-35 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Y11_19121 b4da432de2c92a63dd2ec232915dc306 304 Gene3D G3DSA:3.40.190.10 33 278 5.0E-100 T 13-10-2018 Y11_19121 b4da432de2c92a63dd2ec232915dc306 304 SMART SM00062 43 275 2.5E-64 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_19121 b4da432de2c92a63dd2ec232915dc306 304 SUPERFAMILY SSF53850 3 276 1.41E-60 T 13-10-2018 Y11_19121 b4da432de2c92a63dd2ec232915dc306 304 Gene3D G3DSA:3.40.190.10 137 232 5.0E-100 T 13-10-2018 Y11_19121 b4da432de2c92a63dd2ec232915dc306 304 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 273 2.6E-45 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_26221 01c1f5f841ae68775b719daacee5ace2 217 PIRSF PIRSF006320 1 216 8.3E-101 T 13-10-2018 IPR026041 Glyoxalase ElbB Y11_26221 01c1f5f841ae68775b719daacee5ace2 217 SUPERFAMILY SSF52317 1 215 8.64E-60 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_26221 01c1f5f841ae68775b719daacee5ace2 217 Gene3D G3DSA:3.40.50.880 1 217 1.2E-92 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Y11_25571 b3009de84bbff295506bbd28f1aba24a 361 SUPERFAMILY SSF56935 121 361 3.05E-7 T 13-10-2018 Y11_07351 c3ff9124a91225b2c552ea9abfc80142 876 Pfam PF02470 MlaD protein 747 806 3.0E-9 T 13-10-2018 IPR003399 Mce/MlaD Y11_07351 c3ff9124a91225b2c552ea9abfc80142 876 Pfam PF02470 MlaD protein 46 137 1.4E-17 T 13-10-2018 IPR003399 Mce/MlaD Y11_07351 c3ff9124a91225b2c552ea9abfc80142 876 Pfam PF02470 MlaD protein 634 722 1.1E-10 T 13-10-2018 IPR003399 Mce/MlaD Y11_07351 c3ff9124a91225b2c552ea9abfc80142 876 Pfam PF02470 MlaD protein 280 348 1.5E-6 T 13-10-2018 IPR003399 Mce/MlaD Y11_07351 c3ff9124a91225b2c552ea9abfc80142 876 Pfam PF02470 MlaD protein 163 220 6.4E-6 T 13-10-2018 IPR003399 Mce/MlaD Y11_27921 96d74e09f25583b4bedbb0a65e4fa0e7 146 Pfam PF07226 Protein of unknown function (DUF1422) 15 126 2.6E-50 T 13-10-2018 IPR009867 Protein of unknown function DUF1422 Y11_27921 96d74e09f25583b4bedbb0a65e4fa0e7 146 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 14 126 1.0E-40 T 13-10-2018 IPR009867 Protein of unknown function DUF1422 Y11_19721 33ed15587b31da2bfd8b3812690533f9 242 Pfam PF02687 FtsX-like permease family 148 233 6.1E-9 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Y11_05881 057aac3e1eebbef7256b575be9750fb2 285 Pfam PF13460 NAD(P)H-binding 6 184 7.8E-23 T 13-10-2018 IPR016040 NAD(P)-binding domain Y11_05881 057aac3e1eebbef7256b575be9750fb2 285 Gene3D G3DSA:3.90.25.10 137 269 5.9E-91 T 13-10-2018 Y11_05881 057aac3e1eebbef7256b575be9750fb2 285 Gene3D G3DSA:3.40.50.720 3 267 5.9E-91 T 13-10-2018 Y11_05881 057aac3e1eebbef7256b575be9750fb2 285 SUPERFAMILY SSF51735 2 255 7.63E-64 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_23631 69330adcd9a50e63c2f947065e776179 634 Pfam PF04632 Fusaric acid resistance protein family 290 524 3.3E-26 T 13-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 Y11_18911 826faa8417f34c4a6fc3acb9136bae62 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 2.6E-61 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_18911 826faa8417f34c4a6fc3acb9136bae62 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 2.6E-61 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_18911 826faa8417f34c4a6fc3acb9136bae62 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 2.6E-61 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_18911 826faa8417f34c4a6fc3acb9136bae62 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 2.6E-61 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_18911 826faa8417f34c4a6fc3acb9136bae62 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 2.6E-61 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Y11_18911 826faa8417f34c4a6fc3acb9136bae62 552 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 484 9.2E-55 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_18911 826faa8417f34c4a6fc3acb9136bae62 552 Pfam PF02203 Tar ligand binding domain homologue 4 174 3.7E-11 T 13-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 Y11_18911 826faa8417f34c4a6fc3acb9136bae62 552 SUPERFAMILY SSF58104 240 523 1.16E-69 T 13-10-2018 Y11_18911 826faa8417f34c4a6fc3acb9136bae62 552 SMART SM00283 269 516 2.6E-89 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Y11_18911 826faa8417f34c4a6fc3acb9136bae62 552 Gene3D G3DSA:1.10.287.950 216 518 3.4E-88 T 13-10-2018 Y11_18911 826faa8417f34c4a6fc3acb9136bae62 552 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 13-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Y11_22521 d3c03f79de361d0460201e6cfc9f5925 271 Gene3D G3DSA:3.10.129.10 2 118 2.7E-11 T 13-10-2018 Y11_22521 d3c03f79de361d0460201e6cfc9f5925 271 Pfam PF01575 MaoC like domain 11 48 3.4E-5 T 13-10-2018 IPR002539 MaoC-like dehydratase domain Y11_22521 d3c03f79de361d0460201e6cfc9f5925 271 SUPERFAMILY SSF54637 10 115 3.15E-10 T 13-10-2018 IPR029069 HotDog domain superfamily Y11_35341 c585273bafae18e5c1b0dd37cf89c726 82 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 44 82 2.8E-18 T 13-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 Y11_35341 c585273bafae18e5c1b0dd37cf89c726 82 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 28 82 6.7E-11 T 13-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 Y11_41161 c692d8aa1251f229589d93e52c4dd2bf 198 SUPERFAMILY SSF53098 5 196 5.01E-69 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_41161 c692d8aa1251f229589d93e52c4dd2bf 198 Gene3D G3DSA:3.30.420.10 2 197 2.9E-74 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_41161 c692d8aa1251f229589d93e52c4dd2bf 198 Pfam PF01351 Ribonuclease HII 14 189 2.6E-39 T 13-10-2018 IPR024567 Ribonuclease HII/HIII domain Y11_41161 c692d8aa1251f229589d93e52c4dd2bf 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 12 191 39.381 T 13-10-2018 IPR022898 Ribonuclease HII GO:0004523 Y11_28611 047102c628b7059efb9ca6fd6079dd61 340 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 49 328 1.3E-84 T 13-10-2018 IPR006430 Phage portal protein PBSX family Y11_28611 047102c628b7059efb9ca6fd6079dd61 340 Pfam PF04860 Phage portal protein 92 324 9.5E-16 T 13-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein Y11_28611 047102c628b7059efb9ca6fd6079dd61 340 PIRSF PIRSF018494 1 340 4.0E-156 T 13-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria Y11_30691 1d4d87822568a8a9de417301fddcdb3f 53 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 1 48 2.0E-7 T 13-10-2018 Y11_33131 f6910a6ed93f4c8642971b5d7ef5abd9 129 Pfam PF01196 Ribosomal protein L17 20 116 1.4E-34 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_33131 f6910a6ed93f4c8642971b5d7ef5abd9 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 7.1E-51 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_33131 f6910a6ed93f4c8642971b5d7ef5abd9 129 SUPERFAMILY SSF64263 1 118 4.71E-51 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_33131 f6910a6ed93f4c8642971b5d7ef5abd9 129 Gene3D G3DSA:3.90.1030.10 1 117 3.4E-48 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_33131 f6910a6ed93f4c8642971b5d7ef5abd9 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_33131 f6910a6ed93f4c8642971b5d7ef5abd9 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Y11_37141 d4c2f98ef13f6b374a3fcf1a627d4818 289 Pfam PF15984 Bacterial collagen, middle region 34 217 9.9E-41 T 13-10-2018 IPR031929 Bacterial collagen-like protein, middle domain Y11_25911 74f82f4d01b390ec68a899a195630876 128 Pfam PF06476 Protein of unknown function (DUF1090) 15 123 8.6E-38 T 13-10-2018 IPR009468 Protein of unknown function DUF1090 Y11_14071 92e6525998148bdad1054cdbd0b85aca 466 Pfam PF07196 Flagellin hook IN motif 128 185 2.0E-12 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 Y11_14071 92e6525998148bdad1054cdbd0b85aca 466 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 106 1.7E-18 T 13-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 Y11_14071 92e6525998148bdad1054cdbd0b85aca 466 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 225 455 2.0E-65 T 13-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Y11_06131 7da119ff79ca38a5784ae3d3b60e305f 91 Pfam PF13974 YebO-like protein 16 91 7.4E-29 T 13-10-2018 IPR025594 YebO-like protein Y11_34071 e6d6bb1fc97d4a73ef3293c9c532a798 269 Gene3D G3DSA:3.40.50.1000 5 256 8.3E-81 T 13-10-2018 IPR023214 HAD superfamily Y11_34071 e6d6bb1fc97d4a73ef3293c9c532a798 269 SUPERFAMILY SSF56784 1 265 4.52E-69 T 13-10-2018 IPR036412 HAD-like superfamily Y11_34071 e6d6bb1fc97d4a73ef3293c9c532a798 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 6.9E-27 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Y11_34071 e6d6bb1fc97d4a73ef3293c9c532a798 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 1.5E-61 T 13-10-2018 Y11_34071 e6d6bb1fc97d4a73ef3293c9c532a798 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 13-10-2018 Y11_34071 e6d6bb1fc97d4a73ef3293c9c532a798 269 Gene3D G3DSA:3.30.1240.10 82 186 8.3E-81 T 13-10-2018 Y11_34071 e6d6bb1fc97d4a73ef3293c9c532a798 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 6.0E-63 T 13-10-2018 IPR000150 Cof family GO:0016787 Y11_10401 8eb17edb5ce4da3eea9fc4eaa5a0b306 688 Pfam PF02554 Carbon starvation protein CstA 32 408 8.2E-169 T 13-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 Y11_10401 8eb17edb5ce4da3eea9fc4eaa5a0b306 688 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 1.8E-32 T 13-10-2018 IPR025299 CstA, C-terminal domain Y11_43411 cdd925ec7a20c25dc1d29c9718ede957 63 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 2 50 1.0E-14 T 13-10-2018 IPR022576 Protein of unknown function DUF2633 Y11_43411 cdd925ec7a20c25dc1d29c9718ede957 63 Pfam PF11119 Protein of unknown function (DUF2633) 1 57 1.8E-31 T 13-10-2018 IPR022576 Protein of unknown function DUF2633 Y11_20581 e74eacadd684d7e2a8296854a2aa64ef 192 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 1 20 4.3E-5 T 13-10-2018 IPR012640 Membrane lipoprotein, lipid attachment site Y11_20581 e74eacadd684d7e2a8296854a2aa64ef 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 4.5E-52 T 13-10-2018 IPR005619 Uncharacterised protein family, YajG Y11_05541 93960457988ec9f48fbe7041e87342d8 234 SUPERFAMILY SSF52540 6 227 2.28E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_05541 93960457988ec9f48fbe7041e87342d8 234 Pfam PF00005 ABC transporter 26 174 4.8E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_05541 93960457988ec9f48fbe7041e87342d8 234 SMART SM00382 35 223 3.8E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_05541 93960457988ec9f48fbe7041e87342d8 234 Gene3D G3DSA:3.40.50.300 4 231 6.3E-65 T 13-10-2018 Y11_05541 93960457988ec9f48fbe7041e87342d8 234 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 225 2.7E-109 T 13-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 Y11_05541 93960457988ec9f48fbe7041e87342d8 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_09731 9dc3ba7434f035f17fbca6e41e98971f 116 Pfam PF10734 Protein of unknown function (DUF2523) 43 109 1.3E-6 T 13-10-2018 IPR019670 Protein of unkown function DUF2523 Y11_03631 d33dac69782918ef527048432d4b8c89 161 Pfam PF10722 Putative bacterial sensory transduction regulator 9 130 1.4E-14 T 13-10-2018 IPR019660 Putative sensory transduction regulator YbjN Y11_13681 e390540dd75a343f6c7dacd6e6adaee7 145 Gene3D G3DSA:3.20.20.30 11 134 3.0E-11 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Y11_13681 e390540dd75a343f6c7dacd6e6adaee7 145 SUPERFAMILY SSF51679 16 130 1.63E-11 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Y11_20401 473809b5c3acf899596f03dacbc7fe41 592 Pfam PF00664 ABC transporter transmembrane region 26 295 2.1E-42 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Y11_20401 473809b5c3acf899596f03dacbc7fe41 592 SMART SM00382 366 557 1.9E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_20401 473809b5c3acf899596f03dacbc7fe41 592 SUPERFAMILY SSF52540 336 576 6.62E-79 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_20401 473809b5c3acf899596f03dacbc7fe41 592 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_20401 473809b5c3acf899596f03dacbc7fe41 592 Gene3D G3DSA:3.40.50.300 333 584 3.9E-81 T 13-10-2018 Y11_20401 473809b5c3acf899596f03dacbc7fe41 592 Gene3D G3DSA:1.20.1560.10 1 327 2.1E-74 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_20401 473809b5c3acf899596f03dacbc7fe41 592 Pfam PF00005 ABC transporter 357 505 1.5E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_20401 473809b5c3acf899596f03dacbc7fe41 592 SUPERFAMILY SSF90123 12 323 9.03E-70 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Y11_41261 b9806bd2e6b622411eefd86b37a88d87 138 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Y11_41261 b9806bd2e6b622411eefd86b37a88d87 138 SUPERFAMILY SSF75620 7 114 1.8E-13 T 13-10-2018 Y11_41261 b9806bd2e6b622411eefd86b37a88d87 138 Gene3D G3DSA:3.30.160.20 1 138 1.7E-37 T 13-10-2018 Y11_41261 b9806bd2e6b622411eefd86b37a88d87 138 Pfam PF00472 RF-1 domain 7 131 2.7E-23 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Y11_28541 fb750003d75ad29245a76803d7960c7d 87 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 3 87 2.7E-19 T 13-10-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly Y11_14821 5d20bcf29a2871bd63020296a48fd0f9 400 Pfam PF00872 Transposase, Mutator family 10 373 1.1E-101 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Y11_05441 f4ccfeb13a8439104175a2d083b2f16c 117 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 13-10-2018 IPR019808 Histidine triad, conserved site Y11_05441 f4ccfeb13a8439104175a2d083b2f16c 117 Pfam PF01230 HIT domain 12 109 4.0E-30 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Y11_05441 f4ccfeb13a8439104175a2d083b2f16c 117 SUPERFAMILY SSF54197 2 111 1.08E-35 T 13-10-2018 IPR036265 HIT-like superfamily Y11_05441 f4ccfeb13a8439104175a2d083b2f16c 117 Gene3D G3DSA:3.30.428.10 1 117 2.7E-36 T 13-10-2018 IPR036265 HIT-like superfamily Y11_05441 f4ccfeb13a8439104175a2d083b2f16c 117 PRINTS PR00332 Histidine triad family signature 95 105 3.9E-19 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Y11_05441 f4ccfeb13a8439104175a2d083b2f16c 117 PRINTS PR00332 Histidine triad family signature 6 22 3.9E-19 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Y11_05441 f4ccfeb13a8439104175a2d083b2f16c 117 PRINTS PR00332 Histidine triad family signature 27 45 3.9E-19 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Y11_35331 597a510dd7e6bb47e536ad2cbfbdd137 91 Pfam PF06287 Protein of unknown function (DUF1039) 17 81 2.1E-30 T 13-10-2018 IPR010437 Type III secretion system SsaH Y11_35331 597a510dd7e6bb47e536ad2cbfbdd137 91 TIGRFAM TIGR02498 type_III_ssaH: type III secretion system protein, SsaH family 5 81 1.9E-31 T 13-10-2018 IPR010437 Type III secretion system SsaH Y11_37931 16aa21ce3eeebab617278bc25fe6d5f2 64 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 1 44 2.0E-15 T 13-10-2018 IPR009885 Protein of unknown function DUF1435 Y11_37931 16aa21ce3eeebab617278bc25fe6d5f2 64 Pfam PF07256 Protein of unknown function (DUF1435) 1 64 2.3E-25 T 13-10-2018 IPR009885 Protein of unknown function DUF1435 Y11_33921 a175b85b2f97062d1e613aba264e6539 234 Pfam PF04340 Protein of unknown function, DUF484 13 231 1.8E-73 T 13-10-2018 IPR007435 Protein of unknown function DUF484 Y11_33921 a175b85b2f97062d1e613aba264e6539 234 Gene3D G3DSA:3.30.450.40 48 232 2.6E-35 T 13-10-2018 IPR029016 GAF-like domain superfamily Y11_25931 91e6524f82ed24d73a80e7f9f86f0bd9 131 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 16 127 7.3E-20 T 13-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III Y11_07781 626f90c372db5bf1d048650a57732729 46 Gene3D G3DSA:3.10.450.50 2 46 1.0E-7 T 13-10-2018 Y11_07781 626f90c372db5bf1d048650a57732729 46 SUPERFAMILY SSF54427 4 45 1.14E-6 T 13-10-2018 IPR032710 NTF2-like domain superfamily Y11_37121 0420923b00c50b3e5783492842c908b6 158 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 6 157 5.5E-50 T 13-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Y11_37121 0420923b00c50b3e5783492842c908b6 158 Pfam PF06754 Phosphonate metabolism protein PhnG 7 156 1.8E-49 T 13-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Y11_01771 b3a6abaab1da42d9ed7bde7362390610 352 SUPERFAMILY SSF55347 148 334 6.55E-51 T 13-10-2018 Y11_01771 b3a6abaab1da42d9ed7bde7362390610 352 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 157 332 2.0E-35 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Y11_01771 b3a6abaab1da42d9ed7bde7362390610 352 Gene3D G3DSA:3.30.360.10 146 330 1.4E-108 T 13-10-2018 Y11_01771 b3a6abaab1da42d9ed7bde7362390610 352 SUPERFAMILY SSF51735 21 172 6.65E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_01771 b3a6abaab1da42d9ed7bde7362390610 352 Gene3D G3DSA:3.40.50.720 23 344 1.4E-108 T 13-10-2018 Y11_01771 b3a6abaab1da42d9ed7bde7362390610 352 SMART SM00859 22 137 9.7E-35 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Y11_01771 b3a6abaab1da42d9ed7bde7362390610 352 PIRSF PIRSF000148 20 352 7.6E-97 T 13-10-2018 Y11_01771 b3a6abaab1da42d9ed7bde7362390610 352 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 22 136 3.7E-26 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Y11_18771 9c016f70e992369af2235755d38ec64e 131 Pfam PF02794 RTX toxin acyltransferase family 1 117 6.6E-36 T 13-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 Y11_09821 be8fd1ed68ebc72701691c313abe1c3d 81 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 3 76 7.0E-26 T 13-10-2018 IPR010595 Protein of unknown function DUF1161 Y11_09821 be8fd1ed68ebc72701691c313abe1c3d 81 Pfam PF06649 Protein of unknown function (DUF1161) 23 76 5.3E-27 T 13-10-2018 IPR010595 Protein of unknown function DUF1161 Y11_17671 f086acc1d195e0949b05d9e1244daaf6 296 SUPERFAMILY SSF103481 45 147 9.68E-12 T 13-10-2018 Y11_17671 f086acc1d195e0949b05d9e1244daaf6 296 Pfam PF00892 EamA-like transporter family 16 144 6.6E-21 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_17671 f086acc1d195e0949b05d9e1244daaf6 296 Pfam PF00892 EamA-like transporter family 153 287 2.4E-17 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_17671 f086acc1d195e0949b05d9e1244daaf6 296 SUPERFAMILY SSF103481 187 290 3.53E-11 T 13-10-2018 Y11_12371 887ed16de81ecefdaca3b3be015da560 369 Pfam PF01699 Sodium/calcium exchanger protein 42 192 2.0E-13 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Y11_12371 887ed16de81ecefdaca3b3be015da560 369 Pfam PF01699 Sodium/calcium exchanger protein 227 366 1.8E-7 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Y11_12371 887ed16de81ecefdaca3b3be015da560 369 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 11 367 3.4E-103 T 13-10-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 Y11_38811 d805c1ed14d4fc2490874e51bfa5ac1e 215 Gene3D G3DSA:3.40.640.10 1 68 2.4E-91 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_38811 d805c1ed14d4fc2490874e51bfa5ac1e 215 SUPERFAMILY SSF53383 1 214 1.1E-59 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_38811 d805c1ed14d4fc2490874e51bfa5ac1e 215 Pfam PF01212 Beta-eliminating lyase 1 180 6.1E-31 T 13-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 Y11_38811 d805c1ed14d4fc2490874e51bfa5ac1e 215 Gene3D G3DSA:3.90.1150.10 69 209 2.4E-91 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Y11_38811 d805c1ed14d4fc2490874e51bfa5ac1e 215 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 4 22 - T 13-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 Y11_20211 a416f3e2e424b95a16759628cc6368bd 391 SUPERFAMILY SSF51419 34 268 1.2E-23 T 13-10-2018 IPR029066 PLP-binding barrel Y11_20211 a416f3e2e424b95a16759628cc6368bd 391 Gene3D G3DSA:2.40.37.30 8 379 8.8E-151 T 13-10-2018 Y11_20211 a416f3e2e424b95a16759628cc6368bd 391 Gene3D G3DSA:3.20.20.10 99 251 8.8E-151 T 13-10-2018 IPR029066 PLP-binding barrel Y11_20211 a416f3e2e424b95a16759628cc6368bd 391 Pfam PF01168 Alanine racemase, N-terminal domain 33 264 3.5E-18 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_33581 e555ea815c032c74adb444b0c685811b 242 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 147 2.2E-42 T 13-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Y11_33581 e555ea815c032c74adb444b0c685811b 242 Gene3D G3DSA:2.60.40.10 28 147 7.6E-41 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_33581 e555ea815c032c74adb444b0c685811b 242 Gene3D G3DSA:2.60.40.10 150 242 2.1E-17 T 13-10-2018 IPR013783 Immunoglobulin-like fold Y11_33581 e555ea815c032c74adb444b0c685811b 242 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 174 235 1.1E-13 T 13-10-2018 IPR016148 Pili assembly chaperone, C-terminal Y11_33581 e555ea815c032c74adb444b0c685811b 242 PRINTS PR00969 Pili chaperone signature 104 121 6.8E-27 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_33581 e555ea815c032c74adb444b0c685811b 242 PRINTS PR00969 Pili chaperone signature 168 183 6.8E-27 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_33581 e555ea815c032c74adb444b0c685811b 242 PRINTS PR00969 Pili chaperone signature 76 97 6.8E-27 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_33581 e555ea815c032c74adb444b0c685811b 242 PRINTS PR00969 Pili chaperone signature 27 36 6.8E-27 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_33581 e555ea815c032c74adb444b0c685811b 242 PRINTS PR00969 Pili chaperone signature 129 144 6.8E-27 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Y11_33581 e555ea815c032c74adb444b0c685811b 242 SUPERFAMILY SSF49584 141 237 1.31E-13 T 13-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily Y11_33581 e555ea815c032c74adb444b0c685811b 242 SUPERFAMILY SSF49354 21 147 6.28E-43 T 13-10-2018 IPR008962 PapD-like superfamily Y11_20901 a5941324229d5e86599de95c7bc7e2de 229 SUPERFAMILY SSF53474 3 224 1.66E-28 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_20901 a5941324229d5e86599de95c7bc7e2de 229 Pfam PF12697 Alpha/beta hydrolase family 7 220 6.8E-18 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Y11_20901 a5941324229d5e86599de95c7bc7e2de 229 Gene3D G3DSA:3.40.50.1820 1 228 8.9E-41 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_34151 29e98e26478033c0b6e9e84108ed5fe0 174 Gene3D G3DSA:3.40.1000.10 37 174 1.4E-8 T 13-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Y11_34151 29e98e26478033c0b6e9e84108ed5fe0 174 Pfam PF08786 DcrB 41 170 2.8E-28 T 13-10-2018 IPR014894 Protein DcrB Y11_06791 753bfbbfabeb83d19019fa4df67125d9 43 SUPERFAMILY SSF53639 1 42 2.75E-6 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Y11_06791 753bfbbfabeb83d19019fa4df67125d9 43 Gene3D G3DSA:3.40.225.10 1 43 1.9E-6 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Y11_16461 77282c0cc3e8858fb5d5e11545fcf24a 462 Pfam PF13520 Amino acid permease 53 419 1.3E-33 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_16461 77282c0cc3e8858fb5d5e11545fcf24a 462 PIRSF PIRSF006060 7 455 1.4E-70 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_16461 77282c0cc3e8858fb5d5e11545fcf24a 462 Gene3D G3DSA:1.20.1740.10 21 456 1.3E-64 T 13-10-2018 Y11_11271 19644c1b7ed9b48cfbc4fcec062e1ae8 90 Pfam PF07023 Protein of unknown function (DUF1315) 5 81 1.3E-26 T 13-10-2018 IPR009749 Protein of unknown function DUF1315 Y11_09981 65d219569a378fcfe74182c8818f0afa 538 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 474 2.6E-141 T 13-10-2018 IPR010352 Protein of unknown function DUF945 Y11_17941 99fd72d9d23dac5a2328897da80e4e49 322 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 5.4E-14 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Y11_17941 99fd72d9d23dac5a2328897da80e4e49 322 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 81 92 5.4E-14 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Y11_17941 99fd72d9d23dac5a2328897da80e4e49 322 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 5.4E-14 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Y11_17941 99fd72d9d23dac5a2328897da80e4e49 322 SUPERFAMILY SSF56601 15 292 6.75E-62 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Y11_17941 99fd72d9d23dac5a2328897da80e4e49 322 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 48 276 5.2E-81 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Y11_17941 99fd72d9d23dac5a2328897da80e4e49 322 Gene3D G3DSA:3.40.710.10 32 318 3.1E-64 T 13-10-2018 Y11_02811 33ba195df3b6ac545cedae98aba2447c 311 PRINTS PR00482 Omptin serine protease signature 234 254 6.0E-66 T 13-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 Y11_02811 33ba195df3b6ac545cedae98aba2447c 311 PRINTS PR00482 Omptin serine protease signature 83 108 6.0E-66 T 13-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 Y11_02811 33ba195df3b6ac545cedae98aba2447c 311 PRINTS PR00482 Omptin serine protease signature 115 142 6.0E-66 T 13-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 Y11_02811 33ba195df3b6ac545cedae98aba2447c 311 PRINTS PR00482 Omptin serine protease signature 39 53 6.0E-66 T 13-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 Y11_02811 33ba195df3b6ac545cedae98aba2447c 311 PRINTS PR00482 Omptin serine protease signature 143 170 6.0E-66 T 13-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 Y11_02811 33ba195df3b6ac545cedae98aba2447c 311 PRINTS PR00482 Omptin serine protease signature 255 275 6.0E-66 T 13-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 Y11_02811 33ba195df3b6ac545cedae98aba2447c 311 PRINTS PR00482 Omptin serine protease signature 186 207 6.0E-66 T 13-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 Y11_02811 33ba195df3b6ac545cedae98aba2447c 311 PRINTS PR00482 Omptin serine protease signature 208 229 6.0E-66 T 13-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 Y11_02811 33ba195df3b6ac545cedae98aba2447c 311 Gene3D G3DSA:2.40.128.90 26 311 8.4E-103 T 13-10-2018 Y11_02811 33ba195df3b6ac545cedae98aba2447c 311 Pfam PF01278 Omptin family 33 311 5.7E-110 T 13-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 Y11_02811 33ba195df3b6ac545cedae98aba2447c 311 SUPERFAMILY SSF69917 32 311 3.4E-93 T 13-10-2018 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 Y11_02811 33ba195df3b6ac545cedae98aba2447c 311 PIRSF PIRSF001522 1 311 1.8E-116 T 13-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 Y11_37981 ab77636c1ffd18013a971e532ac211f1 97 Pfam PF00583 Acetyltransferase (GNAT) family 3 70 2.9E-14 T 13-10-2018 IPR000182 GNAT domain Y11_37981 ab77636c1ffd18013a971e532ac211f1 97 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 1 92 2.5E-35 T 13-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 Y11_37981 ab77636c1ffd18013a971e532ac211f1 97 Gene3D G3DSA:3.40.630.30 1 97 1.5E-33 T 13-10-2018 Y11_37981 ab77636c1ffd18013a971e532ac211f1 97 SUPERFAMILY SSF55729 2 95 4.51E-25 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Y11_08431 604199fa2f1992304e12df6571118646 48 Pfam PF07869 Protein of unknown function (DUF1656) 2 39 7.5E-10 T 13-10-2018 IPR012451 Protein of unknown function DUF1656 Y11_17061 5f8506b81454915f8014ebc356f0ce41 545 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 1.4E-9 T 13-10-2018 Y11_17061 5f8506b81454915f8014ebc356f0ce41 545 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 321 333 1.4E-9 T 13-10-2018 Y11_17061 5f8506b81454915f8014ebc356f0ce41 545 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 1.4E-9 T 13-10-2018 Y11_17061 5f8506b81454915f8014ebc356f0ce41 545 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 102 2.6E-7 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_17061 5f8506b81454915f8014ebc356f0ce41 545 Pfam PF00361 Proton-conducting membrane transporter 132 425 6.8E-56 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Y11_24111 cc731f6c504799c9fb77f57ddbc7d7e1 329 Gene3D G3DSA:3.30.750.140 189 304 1.2E-20 T 13-10-2018 IPR038610 FliK-like, C-terminal domain superfamily Y11_24111 cc731f6c504799c9fb77f57ddbc7d7e1 329 Pfam PF02120 Flagellar hook-length control protein FliK 213 294 4.6E-20 T 13-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Y11_01211 6482fdb57b3dc9a067e423f214f90a60 121 Gene3D G3DSA:2.40.128.110 1 121 6.9E-40 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Y11_01211 6482fdb57b3dc9a067e423f214f90a60 121 Pfam PF04264 YceI-like domain 1 116 4.4E-29 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Y11_01211 6482fdb57b3dc9a067e423f214f90a60 121 SMART SM00867 1 118 2.5E-23 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Y11_01211 6482fdb57b3dc9a067e423f214f90a60 121 SUPERFAMILY SSF101874 1 120 1.14E-40 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Y11_42591 001f73c8b8e56ce6db7e2d908ce629ed 389 Gene3D G3DSA:2.40.37.30 8 385 2.3E-145 T 13-10-2018 Y11_42591 001f73c8b8e56ce6db7e2d908ce629ed 389 Gene3D G3DSA:3.20.20.10 104 256 2.3E-145 T 13-10-2018 IPR029066 PLP-binding barrel Y11_42591 001f73c8b8e56ce6db7e2d908ce629ed 389 Pfam PF01168 Alanine racemase, N-terminal domain 33 269 2.6E-19 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Y11_42591 001f73c8b8e56ce6db7e2d908ce629ed 389 SUPERFAMILY SSF51419 34 273 2.24E-20 T 13-10-2018 IPR029066 PLP-binding barrel Y11_10971 f1738fff578e0fb0fc043c40a98ef59b 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 70 5.9E-14 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Y11_10971 f1738fff578e0fb0fc043c40a98ef59b 301 SUPERFAMILY SSF161098 99 282 1.57E-23 T 13-10-2018 IPR035906 MetI-like superfamily Y11_10971 f1738fff578e0fb0fc043c40a98ef59b 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 299 1.8E-26 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_10971 f1738fff578e0fb0fc043c40a98ef59b 301 Gene3D G3DSA:1.10.3720.10 99 297 1.3E-16 T 13-10-2018 IPR035906 MetI-like superfamily Y11_31501 5db3749b7d0ca366d7e0313ca087bc5a 105 Pfam PF14330 Domain of unknown function (DUF4387) 6 102 8.6E-38 T 13-10-2018 IPR025496 Protein of unknown function DUF4387 Y11_40971 4c75dc4d297435bf5ae51f03ad47f592 149 PRINTS PR00369 Flavodoxin signature 108 127 6.6E-7 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Y11_40971 4c75dc4d297435bf5ae51f03ad47f592 149 PRINTS PR00369 Flavodoxin signature 53 64 6.6E-7 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Y11_40971 4c75dc4d297435bf5ae51f03ad47f592 149 PRINTS PR00369 Flavodoxin signature 84 94 6.6E-7 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Y11_40971 4c75dc4d297435bf5ae51f03ad47f592 149 Gene3D G3DSA:3.40.50.360 1 149 1.6E-41 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_40971 4c75dc4d297435bf5ae51f03ad47f592 149 Pfam PF00258 Flavodoxin 6 130 3.4E-22 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Y11_40971 4c75dc4d297435bf5ae51f03ad47f592 149 SUPERFAMILY SSF52218 1 148 1.61E-39 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Y11_26421 d5a6615b5d2dbb7ab114e9a0a7cad185 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 1.5E-102 T 13-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria Y11_26421 d5a6615b5d2dbb7ab114e9a0a7cad185 260 Pfam PF02405 Permease MlaE 45 256 3.3E-75 T 13-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Y11_28341 b5ed6151afab11fdc012bea7329ef53b 145 Pfam PF05656 Protein of unknown function (DUF805) 7 132 1.1E-20 T 13-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 Y11_17411 554353fcfefb3dcc77a4e23efc1493c9 273 Pfam PF00892 EamA-like transporter family 128 256 2.4E-15 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_17411 554353fcfefb3dcc77a4e23efc1493c9 273 SUPERFAMILY SSF103481 165 259 2.88E-6 T 13-10-2018 Y11_10051 e427b08456eb381937cfbfc3b861ff6c 349 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 241 6.2E-13 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Y11_10051 e427b08456eb381937cfbfc3b861ff6c 349 SUPERFAMILY SSF51735 3 198 8.44E-47 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_10051 e427b08456eb381937cfbfc3b861ff6c 349 Gene3D G3DSA:3.40.50.720 5 316 1.9E-134 T 13-10-2018 Y11_10051 e427b08456eb381937cfbfc3b861ff6c 349 Gene3D G3DSA:3.30.360.10 127 330 1.9E-134 T 13-10-2018 Y11_10051 e427b08456eb381937cfbfc3b861ff6c 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 2.2E-21 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Y11_00681 c7f7d67ac064ac47b76d9da40513ed14 391 Gene3D G3DSA:2.40.30.170 209 308 6.6E-32 T 13-10-2018 Y11_00681 c7f7d67ac064ac47b76d9da40513ed14 391 SUPERFAMILY SSF111369 43 253 1.96E-22 T 13-10-2018 Y11_00681 c7f7d67ac064ac47b76d9da40513ed14 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 37 258 1.3E-18 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Y11_00681 c7f7d67ac064ac47b76d9da40513ed14 391 Gene3D G3DSA:1.10.287.470 85 176 1.1E-16 T 13-10-2018 Y11_00681 c7f7d67ac064ac47b76d9da40513ed14 391 Gene3D G3DSA:2.40.420.20 309 388 3.0E-13 T 13-10-2018 Y11_00681 c7f7d67ac064ac47b76d9da40513ed14 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 263 5.5E-37 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Y11_06411 f59502252b0062c14139284958a9a721 106 Pfam PF07130 YebG protein 1 74 2.4E-35 T 13-10-2018 IPR009813 Uncharacterised protein family YebG Y11_06411 f59502252b0062c14139284958a9a721 106 Gene3D G3DSA:1.10.10.710 21 90 1.7E-13 T 13-10-2018 IPR038627 YebG-like superfamily Y11_23071 e058120b9ba46347dcdb476d1ebeaf64 205 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 2.5E-64 T 13-10-2018 IPR004777 L-lysine exporter/arginine exporter GO:0016021 Y11_23071 e058120b9ba46347dcdb476d1ebeaf64 205 Pfam PF01810 LysE type translocator 14 202 2.3E-48 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Y11_23071 e058120b9ba46347dcdb476d1ebeaf64 205 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 38.675 T 13-10-2018 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 Y11_21481 3e773a60485fbfc7797c6e6e5a22e7f7 254 Gene3D G3DSA:3.60.20.10 1 254 1.3E-96 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_21481 3e773a60485fbfc7797c6e6e5a22e7f7 254 SUPERFAMILY SSF56235 2 252 1.76E-50 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Y11_21481 3e773a60485fbfc7797c6e6e5a22e7f7 254 Pfam PF13230 Glutamine amidotransferases class-II 1 252 1.0E-112 T 13-10-2018 IPR026869 Putative glutamine amidotransferase type 2 Y11_17521 b7ceb8ad374b36664e2cc8cf843761dd 240 SUPERFAMILY SSF52540 1 235 5.61E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_17521 b7ceb8ad374b36664e2cc8cf843761dd 240 Gene3D G3DSA:3.40.50.300 1 240 4.3E-80 T 13-10-2018 Y11_17521 b7ceb8ad374b36664e2cc8cf843761dd 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Y11_17521 b7ceb8ad374b36664e2cc8cf843761dd 240 SMART SM00382 26 213 4.5E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_17521 b7ceb8ad374b36664e2cc8cf843761dd 240 PIRSF PIRSF039085 1 240 2.3E-108 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Y11_17521 b7ceb8ad374b36664e2cc8cf843761dd 240 Pfam PF00005 ABC transporter 17 165 5.0E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_27471 55a4e5769a9e4ffc68be889c0efcda30 99 Gene3D G3DSA:1.10.260.40 4 86 1.3E-14 T 13-10-2018 Y11_27471 55a4e5769a9e4ffc68be889c0efcda30 99 SMART SM00530 14 69 5.1E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_27471 55a4e5769a9e4ffc68be889c0efcda30 99 SUPERFAMILY SSF47413 6 66 1.02E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_27471 55a4e5769a9e4ffc68be889c0efcda30 99 Pfam PF01381 Helix-turn-helix 19 66 3.9E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_26951 8748213f0416da670380b7ac70b1a979 590 Pfam PF03538 Salmonella virulence plasmid 28.1kDa A protein 20 272 1.3E-15 T 13-10-2018 IPR018003 Insecticidal toxin complex/plasmid virulence protein Y11_02831 ea547d56316832a1da5fe23900b018df 207 Pfam PF00717 Peptidase S24-like 151 205 7.3E-12 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Y11_02831 ea547d56316832a1da5fe23900b018df 207 Gene3D G3DSA:1.10.260.40 1 91 6.6E-36 T 13-10-2018 Y11_02831 ea547d56316832a1da5fe23900b018df 207 SMART SM00530 16 75 5.1E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_02831 ea547d56316832a1da5fe23900b018df 207 SUPERFAMILY SSF51306 109 205 3.66E-18 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Y11_02831 ea547d56316832a1da5fe23900b018df 207 Gene3D G3DSA:2.10.109.10 105 207 7.8E-37 T 13-10-2018 Y11_02831 ea547d56316832a1da5fe23900b018df 207 SUPERFAMILY SSF47413 1 93 1.93E-21 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Y11_02831 ea547d56316832a1da5fe23900b018df 207 Pfam PF01381 Helix-turn-helix 25 73 3.0E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Y11_p0021 928f942fbec2b1f491bf03bc34ab72ea 155 SUPERFAMILY SSF69635 2 126 4.13E-24 T 13-10-2018 Y11_p0021 928f942fbec2b1f491bf03bc34ab72ea 155 Gene3D G3DSA:3.30.1460.10 1 125 7.5E-21 T 13-10-2018 Y11_06711 a9e5446cf4f15bc5592097a8c684def1 117 Pfam PF04343 Protein of unknown function, DUF488 8 113 9.7E-26 T 13-10-2018 IPR007438 Protein of unknown function DUF488 Y11_19991 fa44cadf02d4eda3c7918450f0fe1fdb 418 Pfam PF01943 Polysaccharide biosynthesis protein 5 271 8.0E-44 T 13-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Y11_20941 c6dce1f65d6a0bfedd537eca86541c3a 200 Gene3D G3DSA:3.40.30.10 1 197 1.9E-70 T 13-10-2018 Y11_20941 c6dce1f65d6a0bfedd537eca86541c3a 200 SUPERFAMILY SSF52833 1 194 8.87E-64 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_20941 c6dce1f65d6a0bfedd537eca86541c3a 200 Pfam PF00578 AhpC/TSA family 5 139 4.0E-34 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Y11_20941 c6dce1f65d6a0bfedd537eca86541c3a 200 PIRSF PIRSF000239 1 199 1.3E-57 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Y11_20941 c6dce1f65d6a0bfedd537eca86541c3a 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 2.2E-10 T 13-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Y11_33331 c23b3ed95064b4808b5ac180796b26dc 318 Gene3D G3DSA:3.40.50.2300 128 269 4.1E-109 T 13-10-2018 Y11_33331 c23b3ed95064b4808b5ac180796b26dc 318 Gene3D G3DSA:3.40.50.2300 27 287 4.1E-109 T 13-10-2018 Y11_33331 c23b3ed95064b4808b5ac180796b26dc 318 SUPERFAMILY SSF53822 23 310 3.37E-72 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_33331 c23b3ed95064b4808b5ac180796b26dc 318 Pfam PF13407 Periplasmic binding protein domain 28 275 2.4E-44 T 13-10-2018 IPR025997 Periplasmic binding protein Y11_p0551 9a6707434ce265d50ea67f7ae4341025 115 Pfam PF09013 YopH, N-terminal 40 109 2.9E-11 T 13-10-2018 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal GO:0004725|GO:0006470|GO:0009405 Y11_p0551 9a6707434ce265d50ea67f7ae4341025 115 Gene3D G3DSA:3.30.1570.10 3 115 3.7E-29 T 13-10-2018 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily Y11_p0551 9a6707434ce265d50ea67f7ae4341025 115 SUPERFAMILY SSF64449 1 111 1.26E-47 T 13-10-2018 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily Y11_01991 0b8935c0af7f02d528b9b5fb5180fb11 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 3.0E-148 T 13-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 Y11_40631 b0118c5383fdc86ec8d7f0fccbaa0941 238 Pfam PF03741 Integral membrane protein TerC family 16 202 7.4E-54 T 13-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 Y11_31081 bc631871ee57086f43ff7e00313acd18 349 Pfam PF01548 Transposase 16 156 3.7E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_31081 bc631871ee57086f43ff7e00313acd18 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_03701 df8017c8b617cb25b3bf28397da284f2 158 Pfam PF10767 Protein of unknown function (DUF2593) 16 155 3.4E-59 T 13-10-2018 IPR019703 Protein of unknown function DUF2593 Y11_36041 1260f38bffac6abcb52a7594c79e2de6 181 Pfam PF00929 Exonuclease 9 170 4.0E-35 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Y11_36041 1260f38bffac6abcb52a7594c79e2de6 181 Gene3D G3DSA:3.30.420.10 1 181 1.1E-71 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Y11_36041 1260f38bffac6abcb52a7594c79e2de6 181 SUPERFAMILY SSF53098 4 179 3.93E-48 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_36041 1260f38bffac6abcb52a7594c79e2de6 181 SMART SM00479 7 180 9.4E-22 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Y11_36041 1260f38bffac6abcb52a7594c79e2de6 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.829 T 13-10-2018 IPR022894 Oligoribonuclease GO:0000175 Y11_31151 52e10495e989f13076b9bbc052f1dfe9 550 Pfam PF11658 Cellulose biosynthesis protein BcsG 23 545 3.5E-238 T 13-10-2018 IPR017744 Cellulose biosynthesis protein BcsG Y11_31151 52e10495e989f13076b9bbc052f1dfe9 550 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 21 548 2.1E-233 T 13-10-2018 IPR017744 Cellulose biosynthesis protein BcsG Y11_01331 465c928d3994e33da5f6176941f8d8fe 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.7E-63 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01331 465c928d3994e33da5f6176941f8d8fe 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.7E-63 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01331 465c928d3994e33da5f6176941f8d8fe 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.7E-63 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01331 465c928d3994e33da5f6176941f8d8fe 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.7E-63 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01331 465c928d3994e33da5f6176941f8d8fe 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 3.7E-63 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01331 465c928d3994e33da5f6176941f8d8fe 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.7E-63 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01331 465c928d3994e33da5f6176941f8d8fe 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 2.8E-83 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Y11_01331 465c928d3994e33da5f6176941f8d8fe 245 Pfam PF01578 Cytochrome C assembly protein 20 184 7.5E-33 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Y11_33591 71d32143e991bd494da0fc8a71801821 176 SUPERFAMILY SSF49401 25 175 7.46E-22 T 13-10-2018 IPR008966 Adhesion domain superfamily Y11_33591 71d32143e991bd494da0fc8a71801821 176 Gene3D G3DSA:2.60.40.1090 24 175 2.2E-24 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Y11_40621 954635e27ed9ff14feb107a7b6ed6f55 346 SUPERFAMILY SSF51430 1 344 5.24E-105 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Y11_40621 954635e27ed9ff14feb107a7b6ed6f55 346 Pfam PF00248 Aldo/keto reductase family 16 337 5.0E-71 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain Y11_40621 954635e27ed9ff14feb107a7b6ed6f55 346 Gene3D G3DSA:3.20.20.100 1 346 2.3E-136 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Y11_05761 561de036edbb18dd9f275ea000ea3042 286 Pfam PF00535 Glycosyl transferase family 2 36 164 1.6E-10 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Y11_05761 561de036edbb18dd9f275ea000ea3042 286 SUPERFAMILY SSF53448 47 208 5.96E-17 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_05761 561de036edbb18dd9f275ea000ea3042 286 Gene3D G3DSA:3.90.550.10 32 212 1.2E-13 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_05411 12c6fb4223af6a1ead3c36086d106663 53 TIGRFAM TIGR04495 RiPP_XyeA: putative rSAM-modified RiPP, XyeA family 2 53 3.1E-31 T 13-10-2018 IPR030990 Putative rSAM-modified RiPP, XyeA family Y11_30031 737d4fff12a41895e4ad65caa416460c 37 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 1 23 9.0E-5 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Y11_30031 737d4fff12a41895e4ad65caa416460c 37 Gene3D G3DSA:3.30.230.10 1 37 1.7E-6 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y11_p0011 942d1e816b9abbab6b10848e85131ac4 500 SUPERFAMILY SSF53098 155 277 2.28E-5 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_p0011 942d1e816b9abbab6b10848e85131ac4 500 Gene3D G3DSA:1.10.10.60 7 41 6.2E-6 T 13-10-2018 Y11_p0011 942d1e816b9abbab6b10848e85131ac4 500 Pfam PF00665 Integrase core domain 132 254 5.7E-16 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Y11_01201 1ac85783ed8e6112ac88c5d6e3643b22 71 SUPERFAMILY SSF101874 23 61 1.7E-6 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Y11_08771 b52dcb7f61cabf2d907bd55cc54bd4e8 109 SMART SM00953 1 97 0.006 T 13-10-2018 IPR014914 RES domain Y11_08771 b52dcb7f61cabf2d907bd55cc54bd4e8 109 Pfam PF08808 RES domain 2 105 3.7E-10 T 13-10-2018 IPR014914 RES domain Y11_26781 4037963d23cbc66484672d867c18981d 98 TIGRFAM TIGR03578 EF_0831: conserved hypothetical protein EF_0831/AHA_3912 2 96 3.6E-39 T 13-10-2018 IPR020037 Protein of unknown function DUF4312 Y11_26781 4037963d23cbc66484672d867c18981d 98 Pfam PF14189 Domain of unknown function (DUF4312) 6 88 2.1E-37 T 13-10-2018 IPR020037 Protein of unknown function DUF4312 Y11_23431 3ec0797eaff10a09797f3dee6bc9b3e2 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 5.1E-43 T 13-10-2018 IPR007416 Protein of unknown function DUF469 Y11_03781 6bd03b3f9c2db58c5ec792744e828a15 191 Pfam PF12883 Protein of unknown function (DUF3828) 41 174 7.1E-14 T 13-10-2018 IPR024289 Domain of unknown function DUF3828 Y11_04901 2934e7176c87b8035b92b2eb3628b691 123 Pfam PF00892 EamA-like transporter family 16 119 6.8E-10 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_04901 2934e7176c87b8035b92b2eb3628b691 123 SUPERFAMILY SSF103481 55 123 1.31E-5 T 13-10-2018 Y11_11491 35d63afc48a2119f614122d14bd3c60f 181 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 12 172 22.213 T 13-10-2018 IPR022920 Disulphide bond formation protein DsbB Y11_11491 35d63afc48a2119f614122d14bd3c60f 181 Pfam PF02600 Disulfide bond formation protein DsbB 17 164 3.9E-44 T 13-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 Y11_11491 35d63afc48a2119f614122d14bd3c60f 181 SUPERFAMILY SSF158442 20 166 5.36E-45 T 13-10-2018 IPR023380 DsbB-like superfamily Y11_11491 35d63afc48a2119f614122d14bd3c60f 181 Gene3D G3DSA:1.20.1550.10 6 181 1.4E-67 T 13-10-2018 IPR023380 DsbB-like superfamily Y11_07021 c504606a5ec19eac2f25a659ed4819c4 155 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 1 137 2.0E-48 T 13-10-2018 Y11_07021 c504606a5ec19eac2f25a659ed4819c4 155 Pfam PF13994 PgaD-like protein 5 134 3.7E-32 T 13-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 Y11_07021 c504606a5ec19eac2f25a659ed4819c4 155 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 5 138 6.0E-33 T 13-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 Y11_12881 65b32de31138f62a2f8a436d35993d97 211 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 117 1.8E-44 T 13-10-2018 IPR006531 Gp5 N-terminal Y11_12881 65b32de31138f62a2f8a436d35993d97 211 Gene3D G3DSA:2.60.220.40 89 161 2.3E-30 T 13-10-2018 Y11_12881 65b32de31138f62a2f8a436d35993d97 211 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 209 5.5E-64 T 13-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 Y11_12881 65b32de31138f62a2f8a436d35993d97 211 Gene3D G3DSA:2.40.50.230 4 88 3.6E-33 T 13-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily Y11_15231 001527af2bf41b161a0a0217e5d4e43c 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 4.0E-58 T 13-10-2018 IPR018636 Protein of unknown function DUF2058 Y11_15701 7dd832b38b7c77c1da6a1934cd35cdb0 150 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 1 138 1.1E-49 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Y11_15701 7dd832b38b7c77c1da6a1934cd35cdb0 150 PIRSF PIRSF028301 1 150 1.0E-50 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Y11_15701 7dd832b38b7c77c1da6a1934cd35cdb0 150 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 1 141 2.4E-50 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Y11_31341 9d2daadf7b6fe8be9ce1e97ae7769828 263 Gene3D G3DSA:3.20.20.450 26 258 1.0E-32 T 13-10-2018 IPR035919 EAL domain superfamily Y11_31341 9d2daadf7b6fe8be9ce1e97ae7769828 263 Pfam PF00563 EAL domain 32 248 1.2E-25 T 13-10-2018 IPR001633 EAL domain Y11_31341 9d2daadf7b6fe8be9ce1e97ae7769828 263 SUPERFAMILY SSF141868 31 256 2.22E-28 T 13-10-2018 IPR035919 EAL domain superfamily Y11_31341 9d2daadf7b6fe8be9ce1e97ae7769828 263 SMART SM00052 23 253 8.4E-10 T 13-10-2018 IPR001633 EAL domain Y11_17351 440676c17b6138c88dab1b1e55d307f3 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_17351 440676c17b6138c88dab1b1e55d307f3 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_04041 440676c17b6138c88dab1b1e55d307f3 349 Pfam PF01548 Transposase 16 156 5.0E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_04041 440676c17b6138c88dab1b1e55d307f3 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 297 3.4E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_27221 091a9dc4280bbb78cc25d3059fae9c72 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 79 6.0E-36 T 13-10-2018 IPR010398 Protein of unknown function DUF997 Y11_27221 091a9dc4280bbb78cc25d3059fae9c72 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 8.0E-31 T 13-10-2018 IPR010398 Protein of unknown function DUF997 Y11_35261 3d6b79596507d1ff83a8eb41512a5e53 486 Pfam PF04888 Secretion system effector C (SseC) like family 94 484 1.6E-55 T 13-10-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 Y11_42991 877c4fad5d9962f164648183a00c6fa6 82 Pfam PF01758 Sodium Bile acid symporter family 1 77 1.0E-6 T 13-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Y11_38691 b4a37e4993de55b02673eeba95b12e7e 256 Pfam PF09335 SNARE associated Golgi protein 36 159 3.4E-20 T 13-10-2018 IPR032816 SNARE associated Golgi protein Y11_07481 e1bb928b679422adf5d296ab1a2369d8 263 Pfam PF01548 Transposase 16 156 2.5E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_34491 3b5484cda704eb4fc59ad06762c8c6ad 246 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 13 240 1.6E-38 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Y11_34491 3b5484cda704eb4fc59ad06762c8c6ad 246 SUPERFAMILY SSF51695 6 242 6.28E-63 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Y11_34491 3b5484cda704eb4fc59ad06762c8c6ad 246 Gene3D G3DSA:3.20.20.190 9 237 1.9E-78 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Y11_26541 2145df5627c168be8b448e3d873b40d2 70 SUPERFAMILY SSF55594 2 70 9.29E-15 T 13-10-2018 IPR035895 HPr-like superfamily Y11_26541 2145df5627c168be8b448e3d873b40d2 70 Gene3D G3DSA:3.30.1340.10 1 65 1.2E-19 T 13-10-2018 IPR035895 HPr-like superfamily Y11_26541 2145df5627c168be8b448e3d873b40d2 70 Pfam PF00381 PTS HPr component phosphorylation site 2 64 1.4E-12 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Y11_27911 d948781de093e82a2ea83e03284a905b 367 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 366 6.1E-194 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Y11_27911 d948781de093e82a2ea83e03284a905b 367 Gene3D G3DSA:3.40.1350.30 45 189 6.0E-145 T 13-10-2018 Y11_27911 d948781de093e82a2ea83e03284a905b 367 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.89 T 13-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 Y11_27911 d948781de093e82a2ea83e03284a905b 367 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site Y11_27911 d948781de093e82a2ea83e03284a905b 367 SUPERFAMILY SSF53335 9 365 5.63E-52 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_27911 d948781de093e82a2ea83e03284a905b 367 Gene3D G3DSA:3.40.50.150 14 362 6.0E-145 T 13-10-2018 Y11_27911 d948781de093e82a2ea83e03284a905b 367 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 13-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site Y11_27911 d948781de093e82a2ea83e03284a905b 367 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 366 3.3E-189 T 13-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 Y11_03491 deb61e294926281f3b8d9ae31ee4c510 223 SUPERFAMILY SSF161098 14 205 2.22E-43 T 13-10-2018 IPR035906 MetI-like superfamily Y11_03491 deb61e294926281f3b8d9ae31ee4c510 223 Gene3D G3DSA:1.10.3720.10 8 221 9.0E-48 T 13-10-2018 IPR035906 MetI-like superfamily Y11_03491 deb61e294926281f3b8d9ae31ee4c510 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 205 1.0E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_24961 257c26bb8be01a02ae2e7bea0bc035e3 93 Pfam PF04380 Membrane fusogenic activity 1 78 1.7E-27 T 13-10-2018 IPR007475 Membrane fusogenic activity Y11_43221 0fd89a8ade5b71df07a091f1422f8b49 341 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 5 341 2.7E-179 T 13-10-2018 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 Y11_43221 0fd89a8ade5b71df07a091f1422f8b49 341 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 5 193 2.3E-71 T 13-10-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 Y11_43221 0fd89a8ade5b71df07a091f1422f8b49 341 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 248 340 6.6E-42 T 13-10-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 Y11_34301 c745fbc582698a0de93b5ee60ceaef00 101 Pfam PF00872 Transposase, Mutator family 9 95 9.4E-13 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Y11_29861 67e7e09ca1a1ab6c805343ec9aaea189 284 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 64 77 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site Y11_29861 67e7e09ca1a1ab6c805343ec9aaea189 284 Gene3D G3DSA:3.40.190.10 128 221 3.4E-63 T 13-10-2018 Y11_29861 67e7e09ca1a1ab6c805343ec9aaea189 284 SMART SM00062 40 263 1.1E-67 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_29861 67e7e09ca1a1ab6c805343ec9aaea189 284 SUPERFAMILY SSF53850 12 262 4.97E-67 T 13-10-2018 Y11_29861 67e7e09ca1a1ab6c805343ec9aaea189 284 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 261 3.1E-59 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Y11_29861 67e7e09ca1a1ab6c805343ec9aaea189 284 Gene3D G3DSA:3.40.190.10 32 256 3.4E-63 T 13-10-2018 Y11_19111 cb309f1bce5d7ee89d97049a2c520396 194 SUPERFAMILY SSF50475 19 177 3.51E-19 T 13-10-2018 Y11_19111 cb309f1bce5d7ee89d97049a2c520396 194 Gene3D G3DSA:2.30.110.10 24 152 5.0E-24 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Y11_19111 cb309f1bce5d7ee89d97049a2c520396 194 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 14 187 1.1E-66 T 13-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent Y11_19111 cb309f1bce5d7ee89d97049a2c520396 194 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 35 127 1.8E-12 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Y11_16721 54c15ad788af16abeddee1b04efe391e 289 Gene3D G3DSA:3.90.25.10 165 257 4.3E-84 T 13-10-2018 Y11_16721 54c15ad788af16abeddee1b04efe391e 289 Gene3D G3DSA:3.40.50.720 5 262 4.3E-84 T 13-10-2018 Y11_16721 54c15ad788af16abeddee1b04efe391e 289 SUPERFAMILY SSF51735 4 284 2.19E-64 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Y11_16721 54c15ad788af16abeddee1b04efe391e 289 Pfam PF04321 RmlD substrate binding domain 4 261 6.2E-59 T 13-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Y11_23241 bfdbe9736f68bc4a9bb2ad343b98d5d0 143 Pfam PF04143 Sulphur transport 10 131 3.9E-8 T 13-10-2018 IPR007272 Sulphur transport domain Y11_15091 e169e706ede8f080beb0ef1dcee272e3 183 Gene3D G3DSA:3.40.50.300 1 154 3.4E-15 T 13-10-2018 Y11_15091 e169e706ede8f080beb0ef1dcee272e3 183 Pfam PF13476 AAA domain 5 168 1.3E-11 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain Y11_15091 e169e706ede8f080beb0ef1dcee272e3 183 SUPERFAMILY SSF52540 1 169 7.49E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_00311 f4da304029097f06163dc2dfa205fa32 404 Gene3D G3DSA:3.30.160.660 208 321 1.8E-6 T 13-10-2018 Y11_00311 f4da304029097f06163dc2dfa205fa32 404 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 58 382 3.4E-23 T 13-10-2018 IPR003776 YcaO-like domain Y11_23301 29fef3c27db694284493ce36cae501e3 168 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 168 30.47 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 Y11_23301 29fef3c27db694284493ce36cae501e3 168 SUPERFAMILY SSF143456 2 168 8.5E-56 T 13-10-2018 Y11_23301 29fef3c27db694284493ce36cae501e3 168 Pfam PF02622 Uncharacterized ACR, COG1678 2 155 4.5E-45 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 Y11_23301 29fef3c27db694284493ce36cae501e3 168 Gene3D G3DSA:3.40.1740.10 1 168 1.1E-54 T 13-10-2018 Y11_41681 a8bad451753684568c06abbfec0be4cd 110 Pfam PF04899 MbeD/MobD like 1 59 1.2E-8 T 13-10-2018 IPR006983 MbeD/MobD-like Y11_21381 6ace0854d6d768c7a411338eb990c55e 311 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 31 301 2.1E-21 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Y11_21381 6ace0854d6d768c7a411338eb990c55e 311 SUPERFAMILY SSF51695 25 306 3.14E-51 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Y11_21381 6ace0854d6d768c7a411338eb990c55e 311 Gene3D G3DSA:3.20.20.190 7 311 8.0E-43 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Y11_01521 283c1929d5384458edfc70ceb7c81055 93 Pfam PF08891 YfcL protein 4 86 1.3E-34 T 13-10-2018 IPR014987 Uncharacterised protein family YfcL Y11_40831 16fd41259dcc9eecd2fe03d9072b9f85 146 Pfam PF02657 Fe-S metabolism associated domain 19 138 6.6E-39 T 13-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like Y11_40831 16fd41259dcc9eecd2fe03d9072b9f85 146 Gene3D G3DSA:3.90.1010.10 1 144 2.8E-49 T 13-10-2018 Y11_40831 16fd41259dcc9eecd2fe03d9072b9f85 146 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 3 141 2.4E-76 T 13-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE Y11_40831 16fd41259dcc9eecd2fe03d9072b9f85 146 SUPERFAMILY SSF82649 3 145 5.02E-45 T 13-10-2018 Y11_16091 e800f1bb4eead59f56aa223660e3a063 210 Gene3D G3DSA:3.40.50.10230 1 209 1.4E-71 T 13-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 Y11_16091 e800f1bb4eead59f56aa223660e3a063 210 SUPERFAMILY SSF63965 9 207 2.75E-64 T 13-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 Y11_16091 e800f1bb4eead59f56aa223660e3a063 210 Pfam PF02570 Precorrin-8X methylmutase 9 204 1.0E-66 T 13-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 Y11_06281 fb47628f97193cfce48dfba4b4fac4c3 287 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 16 285 3.7E-111 T 13-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 Y11_06281 fb47628f97193cfce48dfba4b4fac4c3 287 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 15 285 7.6E-142 T 13-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 Y11_21151 1d032743235827910d575cefdc5e8cb8 185 SUPERFAMILY SSF53335 14 159 4.56E-15 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Y11_21151 1d032743235827910d575cefdc5e8cb8 185 Gene3D G3DSA:3.40.50.150 16 175 3.2E-12 T 13-10-2018 Y11_34441 ed816862a8d984dcd88fdbbd8fbed4a3 317 Gene3D G3DSA:3.40.190.10 24 317 5.1E-49 T 13-10-2018 Y11_34441 ed816862a8d984dcd88fdbbd8fbed4a3 317 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 142 159 - T 13-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 Y11_34441 ed816862a8d984dcd88fdbbd8fbed4a3 317 SUPERFAMILY SSF53850 27 315 4.84E-50 T 13-10-2018 Y11_34441 ed816862a8d984dcd88fdbbd8fbed4a3 317 Pfam PF01547 Bacterial extracellular solute-binding protein 44 314 2.5E-31 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein Y11_42121 49e89af9ab76227ed3d434c2ba13d1f2 94 Gene3D G3DSA:3.10.20.280 1 88 7.8E-34 T 13-10-2018 IPR037021 RnfH superfamily Y11_42121 49e89af9ab76227ed3d434c2ba13d1f2 94 Hamap MF_00460 Protein RnfH [rnfH]. 4 94 25.706 T 13-10-2018 IPR005346 RnfH protein Y11_42121 49e89af9ab76227ed3d434c2ba13d1f2 94 SUPERFAMILY SSF54285 4 78 2.06E-26 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Y11_42121 49e89af9ab76227ed3d434c2ba13d1f2 94 Pfam PF03658 RnfH family Ubiquitin 4 86 2.7E-34 T 13-10-2018 IPR005346 RnfH protein Y11_09591 9656f712e0daac6114027f6964fec210 391 SUPERFAMILY SSF46565 249 289 1.7E-5 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Y11_43261 40a55739f701a61df8e72c65a1b4a9f7 112 SUPERFAMILY SSF160113 4 58 3.53E-19 T 13-10-2018 IPR036913 YegP-like superfamily Y11_43261 40a55739f701a61df8e72c65a1b4a9f7 112 SUPERFAMILY SSF160113 55 109 2.22E-15 T 13-10-2018 IPR036913 YegP-like superfamily Y11_43261 40a55739f701a61df8e72c65a1b4a9f7 112 Pfam PF07411 Domain of unknown function (DUF1508) 11 58 7.2E-23 T 13-10-2018 IPR010879 Domain of unknown function DUF1508 Y11_43261 40a55739f701a61df8e72c65a1b4a9f7 112 Pfam PF07411 Domain of unknown function (DUF1508) 63 109 3.8E-19 T 13-10-2018 IPR010879 Domain of unknown function DUF1508 Y11_43261 40a55739f701a61df8e72c65a1b4a9f7 112 Gene3D G3DSA:2.30.29.80 2 112 1.2E-46 T 13-10-2018 Y11_41111 81d5138ef541db0ada69af40c465bd55 165 Pfam PF03938 Outer membrane protein (OmpH-like) 10 163 8.8E-38 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Y11_41111 81d5138ef541db0ada69af40c465bd55 165 SUPERFAMILY SSF111384 22 164 1.28E-39 T 13-10-2018 Y11_41111 81d5138ef541db0ada69af40c465bd55 165 PIRSF PIRSF002094 1 165 2.0E-63 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Y11_41111 81d5138ef541db0ada69af40c465bd55 165 SMART SM00935 12 165 5.8E-57 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Y11_41111 81d5138ef541db0ada69af40c465bd55 165 Gene3D G3DSA:3.30.910.20 21 165 2.2E-49 T 13-10-2018 IPR024930 Skp domain superfamily Y11_26481 bcaa45f31870436c4e0544007e8f810d 181 Pfam PF03968 OstA-like protein 36 146 2.3E-27 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Y11_26481 bcaa45f31870436c4e0544007e8f810d 181 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 5 165 24.943 T 13-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 Y11_26481 bcaa45f31870436c4e0544007e8f810d 181 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 25 164 7.5E-47 T 13-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 Y11_26481 bcaa45f31870436c4e0544007e8f810d 181 Gene3D G3DSA:2.60.450.10 25 162 7.1E-49 T 13-10-2018 Y11_05191 563c29d09215746fb34c924614c35f06 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 77 4.0E-18 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Y11_05191 563c29d09215746fb34c924614c35f06 95 Gene3D G3DSA:3.30.70.100 1 95 2.0E-29 T 13-10-2018 Y11_05191 563c29d09215746fb34c924614c35f06 95 SUPERFAMILY SSF54909 3 89 7.02E-28 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Y11_27411 7a9225bd3a2159ab199fd1296134922e 229 Pfam PF04172 LrgB-like family 14 225 7.0E-71 T 13-10-2018 IPR007300 CidB/LrgB family Y11_16431 951761f45698cd07b0d0d8b66332c61e 352 Pfam PF13515 Fusaric acid resistance protein-like 33 158 1.7E-14 T 13-10-2018 Y11_06911 7d431941f1adb232898fdaf992cca3ee 162 Gene3D G3DSA:3.40.30.10 16 161 1.1E-36 T 13-10-2018 Y11_06911 7d431941f1adb232898fdaf992cca3ee 162 SUPERFAMILY SSF52833 23 160 2.87E-33 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Y11_06911 7d431941f1adb232898fdaf992cca3ee 162 Pfam PF08534 Redoxin 25 147 2.1E-19 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Y11_41671 6d15d5339b3d75d844c7885344f24969 149 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 149 4.0E-63 T 13-10-2018 IPR009587 Protein of unknown function DUF1198 Y11_41671 6d15d5339b3d75d844c7885344f24969 149 Pfam PF06711 Protein of unknown function (DUF1198) 1 143 1.6E-63 T 13-10-2018 IPR009587 Protein of unknown function DUF1198 Y11_21081 0c35d2d2e0e339dc5fe1087a3ab683aa 95 Gene3D G3DSA:2.60.120.10 1 94 5.1E-33 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Y11_21081 0c35d2d2e0e339dc5fe1087a3ab683aa 95 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 94 25.291 T 13-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 Y11_21081 0c35d2d2e0e339dc5fe1087a3ab683aa 95 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 5.4E-33 T 13-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 Y11_21081 0c35d2d2e0e339dc5fe1087a3ab683aa 95 SUPERFAMILY SSF51182 1 94 1.2E-32 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_30381 2adab4cbde11d7872da82088968c2ab5 248 Pfam PF01810 LysE type translocator 57 240 7.1E-13 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Y11_17661 a9c5da9f22462cdfbb193329b622c883 436 Gene3D G3DSA:1.50.10.100 48 422 2.9E-122 T 13-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Y11_17661 a9c5da9f22462cdfbb193329b622c883 436 SUPERFAMILY SSF48230 98 375 1.28E-56 T 13-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Y11_17661 a9c5da9f22462cdfbb193329b622c883 436 Pfam PF05426 Alginate lyase 92 372 5.6E-90 T 13-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 Y11_16411 e76fac6881b7430781b51c0b7976b49f 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 306 2.3E-35 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_29131 4dbadf68ad0484dfa2cbbd7213f246f1 205 Pfam PF03458 UPF0126 domain 5 79 4.0E-19 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 Y11_29131 4dbadf68ad0484dfa2cbbd7213f246f1 205 Pfam PF03458 UPF0126 domain 91 164 2.4E-20 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 Y11_15991 044c7f4cffeec63674ac023e978ed6a8 138 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 30 67 8.8E-6 T 13-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 Y11_15991 044c7f4cffeec63674ac023e978ed6a8 138 Gene3D G3DSA:1.10.1760.20 29 91 1.4E-5 T 13-10-2018 Y11_23371 5ba2db9a8f7898d3cec7fd6ad11d9d76 184 Pfam PF02325 YGGT family 10 76 3.4E-21 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 Y11_23371 5ba2db9a8f7898d3cec7fd6ad11d9d76 184 Pfam PF02325 YGGT family 108 171 6.0E-19 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 Y11_09901 9f1e045699f2a2d5db101368432d6629 58 Pfam PF09851 Short C-terminal domain 30 57 1.8E-6 T 13-10-2018 IPR018649 SHOCT domain Y11_22021 e6d214f873ede3f9783a2927c8913f61 426 PIRSF PIRSF004539 1 426 1.6E-175 T 13-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 Y11_22021 e6d214f873ede3f9783a2927c8913f61 426 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 1 423 6.4E-151 T 13-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 Y11_22021 e6d214f873ede3f9783a2927c8913f61 426 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 1 358 4.9E-143 T 13-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 Y11_27421 1adb62eee903b7ee3132058c59a366b2 141 Pfam PF03788 LrgA family 31 122 3.3E-26 T 13-10-2018 IPR005538 LrgA/CidA family GO:0016021 Y11_30671 4e03a37c7abefaf6ff952ea86594169c 833 Pfam PF13289 SIR2-like domain 104 235 4.3E-22 T 13-10-2018 IPR039444 SIR2-like domain Y11_30671 4e03a37c7abefaf6ff952ea86594169c 833 SUPERFAMILY SSF52467 14 209 3.6E-8 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Y11_29681 d113201c11992c8e3e3782981be5fe75 127 Pfam PF03899 ATP synthase I chain 13 109 4.7E-17 T 13-10-2018 IPR005598 ATP synthase protein I Y11_17451 8cbb59fc2b855d2fd50bce41e0beefd8 221 Pfam PF10099 Anti-sigma-K factor rskA 61 216 1.2E-23 T 13-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 Y11_25811 51e145212cbc18669c6bfd8299ef4029 178 Pfam PF10688 Bacterial inner membrane protein 5 162 5.2E-52 T 13-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV Y11_25811 51e145212cbc18669c6bfd8299ef4029 178 PIRSF PIRSF011443 1 178 2.3E-61 T 13-10-2018 IPR026267 Inner membrane protein YgjV Y11_21351 cbd98e0bd868ff77b4ad88cdaa3c650a 322 Gene3D G3DSA:3.40.50.1100 54 150 3.9E-116 T 13-10-2018 Y11_21351 cbd98e0bd868ff77b4ad88cdaa3c650a 322 Gene3D G3DSA:3.40.50.1100 16 311 3.9E-116 T 13-10-2018 Y11_21351 cbd98e0bd868ff77b4ad88cdaa3c650a 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 307 1.1E-75 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Y11_21351 cbd98e0bd868ff77b4ad88cdaa3c650a 322 SUPERFAMILY SSF53686 8 318 1.15E-96 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y11_35721 735165b36995a60dda5527123641d4b1 81 Gene3D G3DSA:2.10.70.10 44 81 3.9E-17 T 13-10-2018 Y11_35721 735165b36995a60dda5527123641d4b1 81 Pfam PF10636 Hemin uptake protein hemP 46 81 3.5E-17 T 13-10-2018 IPR019600 Hemin uptake protein HemP Y11_p0891 74246e625fce1a8ce4cb61d72ee3b93f 357 Pfam PF04888 Secretion system effector C (SseC) like family 63 352 5.0E-57 T 13-10-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 Y11_01191 90ca0fb9975b2565f97b52789cbf0b93 162 SUPERFAMILY SSF81342 4 158 2.82E-31 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Y11_01191 90ca0fb9975b2565f97b52789cbf0b93 162 Pfam PF01292 Prokaryotic cytochrome b561 5 158 2.1E-20 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Y11_39641 a289ff8ec5a8ca1834e9ed4a9559e392 664 SUPERFAMILY SSF81345 9 329 2.22E-59 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_39641 a289ff8ec5a8ca1834e9ed4a9559e392 664 Pfam PF01032 FecCD transport family 366 661 5.6E-72 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Y11_39641 a289ff8ec5a8ca1834e9ed4a9559e392 664 Pfam PF01032 FecCD transport family 19 327 2.8E-65 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Y11_39641 a289ff8ec5a8ca1834e9ed4a9559e392 664 SUPERFAMILY SSF81345 351 661 4.32E-70 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_39641 a289ff8ec5a8ca1834e9ed4a9559e392 664 Gene3D G3DSA:1.10.3470.10 6 334 2.6E-70 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_39641 a289ff8ec5a8ca1834e9ed4a9559e392 664 Gene3D G3DSA:1.10.3470.10 344 664 2.7E-77 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_25941 e0d12ddfa85f8feb6b206a8caa3927c4 94 Pfam PF13997 YqjK-like protein 13 85 4.5E-32 T 13-10-2018 IPR025612 YqjK-like protein Y11_06521 613b0ebc07254c688ce012cbc71c5c50 294 Pfam PF05425 Copper resistance protein D 189 287 6.7E-14 T 13-10-2018 IPR008457 Copper resistance protein D GO:0016021 Y11_06581 34b83185ed4429f75ffa925c72dda834 405 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 37 145 4.5E-18 T 13-10-2018 IPR010090 Phage tail tape measure protein Y11_36971 0b9a14adec0ec7094c8d1d2bd91b2437 388 SUPERFAMILY SSF48230 63 338 1.74E-54 T 13-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Y11_36971 0b9a14adec0ec7094c8d1d2bd91b2437 388 Gene3D G3DSA:1.50.10.100 13 387 8.5E-120 T 13-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Y11_36971 0b9a14adec0ec7094c8d1d2bd91b2437 388 Pfam PF05426 Alginate lyase 56 335 5.1E-76 T 13-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 Y11_11141 3457c97fa9ee3e766f4a9aaf42694f89 119 SUPERFAMILY SSF46785 5 80 3.16E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Y11_11141 3457c97fa9ee3e766f4a9aaf42694f89 119 Gene3D G3DSA:1.10.10.10 3 91 7.2E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Y11_11141 3457c97fa9ee3e766f4a9aaf42694f89 119 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.2E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Y11_01011 ff344164e947814e6c2dfe71b348e345 143 Pfam PF15970 HicB_like antitoxin of bacterial toxin-antitoxin system 4 83 2.3E-40 T 13-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system Y11_41781 0ebd6d4085d2ad208a5122fed9285647 268 Gene3D G3DSA:3.40.50.300 9 266 4.9E-52 T 13-10-2018 Y11_41781 0ebd6d4085d2ad208a5122fed9285647 268 Pfam PF00005 ABC transporter 26 175 2.0E-19 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Y11_41781 0ebd6d4085d2ad208a5122fed9285647 268 SMART SM00382 35 223 9.4E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Y11_41781 0ebd6d4085d2ad208a5122fed9285647 268 SUPERFAMILY SSF52540 23 237 1.43E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_28521 43f1a2fcfe7bce35337c9a9b4b7ff85e 447 Pfam PF07804 HipA-like C-terminal domain 139 366 1.3E-37 T 13-10-2018 IPR012893 HipA-like, C-terminal Y11_28521 43f1a2fcfe7bce35337c9a9b4b7ff85e 447 Pfam PF13657 HipA N-terminal domain 3 99 1.7E-13 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 Y11_43231 138c62861aa317148ba959fbfb960c8e 182 PIRSF PIRSF038321 2 182 3.0E-88 T 13-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 Y11_43231 138c62861aa317148ba959fbfb960c8e 182 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 5 170 5.2E-77 T 13-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 Y11_43231 138c62861aa317148ba959fbfb960c8e 182 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 180 1.1E-108 T 13-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 Y11_07821 5d839bb0a63baa92e60270182592e012 237 Pfam PF04474 Protein of unknown function (DUF554) 2 229 2.5E-61 T 13-10-2018 IPR007563 Protein of unknown function DUF554 Y11_21511 7725f832751abf3cafaada7bf0b21e5b 616 Gene3D G3DSA:3.40.50.2000 405 585 9.9E-123 T 13-10-2018 Y11_21511 7725f832751abf3cafaada7bf0b21e5b 616 SUPERFAMILY SSF53756 460 586 8.48E-6 T 13-10-2018 Y11_21511 7725f832751abf3cafaada7bf0b21e5b 616 Gene3D G3DSA:3.40.50.11380 265 404 9.9E-123 T 13-10-2018 Y11_10071 2317326766c8335d6cb6b98c0de5b99b 226 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 213 7.6E-35 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_37351 ec2a9972fcfdd6d53f3902a0833a69a5 364 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 1.1E-118 T 13-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 Y11_37351 ec2a9972fcfdd6d53f3902a0833a69a5 364 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 4.4E-74 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Y11_17841 d8697395e0036b8f1e34021a7b361952 156 Pfam PF07308 Protein of unknown function (DUF1456) 86 153 3.0E-25 T 13-10-2018 IPR009921 Domain of unknown function DUF1456 Y11_17841 d8697395e0036b8f1e34021a7b361952 156 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 3.8E-27 T 13-10-2018 IPR009921 Domain of unknown function DUF1456 Y11_38431 031fed26758d1efdf514e48e8d32f8ca 392 Pfam PF06965 Na+/H+ antiporter 1 7 380 3.1E-151 T 13-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Y11_38431 031fed26758d1efdf514e48e8d32f8ca 392 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 380 8.0E-174 T 13-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Y11_38431 031fed26758d1efdf514e48e8d32f8ca 392 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 389 23.675 T 13-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Y11_38431 031fed26758d1efdf514e48e8d32f8ca 392 Gene3D G3DSA:1.20.1530.10 2 387 4.8E-156 T 13-10-2018 IPR023171 Na/H antiporter domain superfamily Y11_10811 8c795286a33d8e58c9ab1e4c41f673ac 104 Pfam PF04972 BON domain 37 103 5.4E-21 T 13-10-2018 IPR007055 BON domain Y11_10811 8c795286a33d8e58c9ab1e4c41f673ac 104 SMART SM00749 42 104 3.5E-7 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Y11_05931 88d4de3af04a18a57be9819015bc94f2 90 Gene3D G3DSA:3.40.630.10 2 90 9.8E-8 T 13-10-2018 Y11_p0881 6cf2bf25e69d345b24f1985c794d2608 70 Gene3D G3DSA:1.25.40.10 1 65 6.6E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_19541 535416891dd57fa265ce1a3908389f7e 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 6 54 1.9E-18 T 13-10-2018 IPR010260 DNA-binding transcriptional activator AlpA Y11_19541 535416891dd57fa265ce1a3908389f7e 66 Gene3D G3DSA:1.10.238.160 5 63 9.2E-6 T 13-10-2018 Y11_37541 d4ee8ca1ec327f0eff7b513fae94bd7f 59 Gene3D G3DSA:3.40.190.290 7 46 8.1E-6 T 13-10-2018 Y11_37811 ab0c009b42f8e6e3f7b748c2576679df 361 SUPERFAMILY SSF51126 26 356 1.24E-61 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor Y11_37811 ab0c009b42f8e6e3f7b748c2576679df 361 Gene3D G3DSA:2.160.20.10 41 361 3.4E-139 T 13-10-2018 IPR012334 Pectin lyase fold Y11_37811 ab0c009b42f8e6e3f7b748c2576679df 361 Pfam PF01095 Pectinesterase 30 268 2.9E-35 T 13-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 Y11_18051 a18af0baa2be56f4e484276c84bd7f92 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 232 1.6E-62 T 13-10-2018 IPR006214 Bax inhibitor 1-related Y11_39951 ec3e72990495959fc44c58e2a061321a 200 Gene3D G3DSA:1.10.3210.10 9 200 3.6E-53 T 13-10-2018 Y11_39951 ec3e72990495959fc44c58e2a061321a 200 SUPERFAMILY SSF109604 12 190 2.36E-44 T 13-10-2018 Y11_39951 ec3e72990495959fc44c58e2a061321a 200 Pfam PF13023 HD domain 21 183 5.0E-49 T 13-10-2018 IPR006674 HD domain Y11_01341 4cf00174ab4765e0c7ae72e3af1cf191 82 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 1.1E-17 T 13-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 Y11_01341 4cf00174ab4765e0c7ae72e3af1cf191 82 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 58 4.9E-18 T 13-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 Y11_29541 978f090732cd66977619006006cd035a 296 Gene3D G3DSA:3.40.50.2300 31 281 8.4E-99 T 13-10-2018 Y11_29541 978f090732cd66977619006006cd035a 296 Pfam PF13407 Periplasmic binding protein domain 29 281 2.5E-60 T 13-10-2018 IPR025997 Periplasmic binding protein Y11_29541 978f090732cd66977619006006cd035a 296 SUPERFAMILY SSF53822 26 296 1.44E-87 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_29541 978f090732cd66977619006006cd035a 296 Gene3D G3DSA:3.40.50.2300 127 262 8.4E-99 T 13-10-2018 Y11_12001 9e615e5564433b07c7ebafe986a20e3e 291 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 35 289 1.3E-92 T 13-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 Y11_33831 a9450348b73152715506aba1429d1e22 399 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 386 5.0E-136 T 13-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 Y11_33831 a9450348b73152715506aba1429d1e22 399 Gene3D G3DSA:1.25.40.10 154 397 1.9E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_33831 a9450348b73152715506aba1429d1e22 399 Pfam PF07219 HemY protein N-terminus 26 132 2.5E-34 T 13-10-2018 IPR010817 HemY, N-terminal Y11_33831 a9450348b73152715506aba1429d1e22 399 SUPERFAMILY SSF48452 139 388 3.8E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_03041 e57e1fd6a452f59474f7135f29022055 342 Gene3D G3DSA:1.10.3720.10 132 336 4.8E-16 T 13-10-2018 IPR035906 MetI-like superfamily Y11_03041 e57e1fd6a452f59474f7135f29022055 342 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 11 50 1.3E-8 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Y11_03041 e57e1fd6a452f59474f7135f29022055 342 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 339 1.6E-28 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_03041 e57e1fd6a452f59474f7135f29022055 342 SUPERFAMILY SSF161098 137 322 6.28E-18 T 13-10-2018 IPR035906 MetI-like superfamily Y11_18851 c3373c12e7c7a828dfab0abc18041611 142 SUPERFAMILY SSF103481 41 141 2.09E-14 T 13-10-2018 Y11_18851 c3373c12e7c7a828dfab0abc18041611 142 Pfam PF00892 EamA-like transporter family 4 140 2.4E-21 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Y11_16651 6fc1f12adde110ac1a3937b4de6ea2e0 268 Gene3D G3DSA:3.90.550.10 11 265 7.4E-10 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_16651 6fc1f12adde110ac1a3937b4de6ea2e0 268 SUPERFAMILY SSF53448 9 258 3.66E-17 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Y11_13081 a5b43f1e1ffff770ac23fc42a736222d 328 Pfam PF16263 Domain of unknown function (DUF4917) 19 324 2.7E-53 T 13-10-2018 IPR032581 Protein of unknown function DUF4917 Y11_32731 c3d1ce86baa8f941ec0d93bc381b7fcd 73 Pfam PF09526 Probable metal-binding protein (DUF2387) 10 59 9.1E-20 T 13-10-2018 IPR012658 Conserved hypothetical protein CHP02443 Y11_32731 c3d1ce86baa8f941ec0d93bc381b7fcd 73 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 9 67 3.0E-30 T 13-10-2018 IPR012658 Conserved hypothetical protein CHP02443 Y11_20101 01d17253943c3167530a811154619825 51 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 1.0E-22 T 13-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related Y11_15111 311e52de08223a3c7d9af921dd4ef30f 350 SUPERFAMILY SSF56281 3 313 3.68E-21 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Y11_15111 311e52de08223a3c7d9af921dd4ef30f 350 Pfam PF00753 Metallo-beta-lactamase superfamily 14 82 9.8E-5 T 13-10-2018 IPR001279 Metallo-beta-lactamase Y11_30151 9c7c3531a0417731155a9a029007b6f1 433 Pfam PF12566 Protein of unknown function (DUF3748) 73 193 1.3E-57 T 13-10-2018 IPR022223 Protein of unknown function DUF3748 Y11_30151 9c7c3531a0417731155a9a029007b6f1 433 Gene3D G3DSA:2.120.10.30 255 433 1.8E-19 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Y11_30151 9c7c3531a0417731155a9a029007b6f1 433 Pfam PF07676 WD40-like Beta Propeller Repeat 402 428 0.1 T 13-10-2018 IPR011659 WD40-like Beta Propeller Y11_30151 9c7c3531a0417731155a9a029007b6f1 433 SUPERFAMILY SSF82171 28 431 3.92E-19 T 13-10-2018 Y11_32101 53bf652bbe534b198ba463190e4c3dc5 326 Gene3D G3DSA:1.20.910.10 93 276 3.5E-13 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Y11_43091 d9dbf8a44edabfa7b3f2cc34ec34866c 90 Pfam PF02371 Transposase IS116/IS110/IS902 family 2 38 9.5E-10 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_20231 234af61bf1bbe4e19a9e04954c558364 121 Pfam PF10941 Protein of unknown function DUF2620 3 115 2.2E-41 T 13-10-2018 IPR021238 Protein of unknown function DUF2620 Y11_34731 1f6585448ada15262e394b5a0ec8a29c 213 PRINTS PR00410 Phenol hydroxylase reductase family signature 87 106 7.8E-13 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Y11_34731 1f6585448ada15262e394b5a0ec8a29c 213 PRINTS PR00410 Phenol hydroxylase reductase family signature 71 80 7.8E-13 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Y11_34731 1f6585448ada15262e394b5a0ec8a29c 213 PRINTS PR00410 Phenol hydroxylase reductase family signature 11 23 7.8E-13 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Y11_34731 1f6585448ada15262e394b5a0ec8a29c 213 PRINTS PR00410 Phenol hydroxylase reductase family signature 112 121 7.8E-13 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Y11_34731 1f6585448ada15262e394b5a0ec8a29c 213 PRINTS PR00410 Phenol hydroxylase reductase family signature 27 34 7.8E-13 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Y11_34731 1f6585448ada15262e394b5a0ec8a29c 213 Gene3D G3DSA:2.40.30.10 1 78 1.3E-16 T 13-10-2018 Y11_34731 1f6585448ada15262e394b5a0ec8a29c 213 Pfam PF00175 Oxidoreductase NAD-binding domain 88 191 3.7E-22 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Y11_34731 1f6585448ada15262e394b5a0ec8a29c 213 SUPERFAMILY SSF52343 80 211 9.17E-34 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Y11_34731 1f6585448ada15262e394b5a0ec8a29c 213 SUPERFAMILY SSF63380 4 77 2.69E-14 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Y11_34731 1f6585448ada15262e394b5a0ec8a29c 213 Gene3D G3DSA:3.40.50.80 79 213 8.7E-28 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Y11_05901 8bad1d6a64ac00dd836ac47334fa430e 94 SUPERFAMILY SSF54909 1 81 1.3E-14 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Y11_05901 8bad1d6a64ac00dd836ac47334fa430e 94 Pfam PF03795 YCII-related domain 1 79 4.9E-11 T 13-10-2018 IPR005545 YCII-related Y11_29021 a704b47fef5ab4fd30192ecfe0a9e578 226 Pfam PF13751 Transposase DDE domain 76 194 2.5E-27 T 13-10-2018 IPR025668 Transposase DDE domain Y11_24581 12d14f37606b0385ef978c0b99e0f8ac 128 Pfam PF01478 Type IV leader peptidase family 4 96 4.6E-9 T 13-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Y11_23101 bb72d4febf3e49f21945f14883f42177 205 Pfam PF01548 Transposase 16 156 1.2E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_41361 fd3903bb270d648bdbb2428c7dc92e23 400 Pfam PF00872 Transposase, Mutator family 10 373 1.5E-102 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Y11_07311 de7ca26a6b195096d65430baa6636f1b 185 Pfam PF05229 Spore Coat Protein U domain 41 182 4.2E-34 T 13-10-2018 IPR007893 Spore coat protein U Y11_07311 de7ca26a6b195096d65430baa6636f1b 185 SMART SM00972 127 182 7.6E-22 T 13-10-2018 IPR007893 Spore coat protein U Y11_11921 ea94348702c7ea4e5f2044d6505ea6e1 131 SUPERFAMILY SSF161084 4 124 2.22E-30 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily Y11_11921 ea94348702c7ea4e5f2044d6505ea6e1 131 Pfam PF01124 MAPEG family 4 120 2.2E-25 T 13-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein Y11_11921 ea94348702c7ea4e5f2044d6505ea6e1 131 Gene3D G3DSA:1.20.120.550 1 128 1.4E-25 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily Y11_40011 2fa49a9f027bcb53acdf6118e4fa949d 67 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 56 1.3E-19 T 13-10-2018 IPR009883 Inner membrane protein YgfX Y11_40011 2fa49a9f027bcb53acdf6118e4fa949d 67 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 1 56 1.0E-12 T 13-10-2018 IPR009883 Inner membrane protein YgfX Y11_41901 19a184466237ba6ed71acc9c66ff3196 352 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 52 333 1.5E-126 T 13-10-2018 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 Y11_41901 19a184466237ba6ed71acc9c66ff3196 352 Pfam PF03824 High-affinity nickel-transport protein 48 338 1.9E-91 T 13-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 Y11_35241 c0eeb7ce7f4b0a13cb01f933a4ea6dcc 193 SUPERFAMILY SSF116927 33 190 3.14E-53 T 13-10-2018 IPR035074 EspA/CesA-like Y11_35241 c0eeb7ce7f4b0a13cb01f933a4ea6dcc 193 Pfam PF03433 EspA-like secreted protein 19 179 4.9E-48 T 13-10-2018 IPR005095 EspA-like secreted protein Y11_14011 d1748a5b49a0df7b924ce38e7b243d70 401 ProDom PD035357 TRANSFERASE 2.1.1.- LYSINE METHYLTRANSFERASE N-METHYLTRANSFERASE FLAGELLUM LYSINE-N-METHYLASE BIOSYNTHETIC FLAGELLIN N-METHYLATION 241 400 3.0E-23 T 13-10-2018 IPR020193 Flagellin lysine-N-methylase, C-terminal Y11_33361 7b47ae1bd469351aa60d6031a442e300 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 302 1.3E-42 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_40901 53a07911ff22578aa221d9400edb7760 400 Pfam PF00872 Transposase, Mutator family 10 373 2.4E-102 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Y11_00251 6cca34d3ddfa212d5c2db5e0b06d18d8 63 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 61 25.787 T 13-10-2018 IPR020910 Uncharacterised protein family UPF0370 Y11_00251 6cca34d3ddfa212d5c2db5e0b06d18d8 63 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 60 4.4E-35 T 13-10-2018 IPR020910 Uncharacterised protein family UPF0370 Y11_12421 f3db7eda79971df4c659666daea0858f 244 Pfam PF13988 Protein of unknown function (DUF4225) 58 222 9.2E-45 T 13-10-2018 IPR025320 Protein of unknown function DUF4225 Y11_34581 e0b7cac21a27a7f7b0ac3affa6356a11 205 Pfam PF01548 Transposase 16 156 1.2E-15 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_33771 d96c7f02d0b34e7d80d47ef9b0b085eb 458 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 447 38.384 T 13-10-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 Y11_33771 d96c7f02d0b34e7d80d47ef9b0b085eb 458 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 441 2.2E-261 T 13-10-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 Y11_08711 f36a259497e1e1ebafacdfd5a83d1264 221 Pfam PF04012 PspA/IM30 family 2 216 7.6E-44 T 13-10-2018 IPR007157 PspA/IM30 Y11_08711 f36a259497e1e1ebafacdfd5a83d1264 221 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 8.6E-95 T 13-10-2018 IPR014319 Phage shock protein, PspA Y11_15971 277bcbc1564bbaff22ecaef696cd138f 93 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 93 42.658 T 13-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 Y11_15971 277bcbc1564bbaff22ecaef696cd138f 93 Pfam PF02553 Cobalt transport protein component CbiN 5 69 1.4E-28 T 13-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 Y11_15971 277bcbc1564bbaff22ecaef696cd138f 93 TIGRFAM TIGR01165 cbiN: cobalt transport protein 1 85 2.4E-38 T 13-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 Y11_20181 eeffc56d9ebc426e815259e9ffbad0b5 193 Pfam PF05598 Transposase domain (DUF772) 52 127 7.0E-24 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Y11_19191 7ebd1f86157334f6ab880b8ba1628763 207 Pfam PF04390 Lipopolysaccharide-assembly 45 159 8.5E-15 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 Y11_19191 7ebd1f86157334f6ab880b8ba1628763 207 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 164 27.263 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 Y11_19191 7ebd1f86157334f6ab880b8ba1628763 207 Gene3D G3DSA:3.30.160.150 16 169 6.3E-61 T 13-10-2018 Y11_07751 4a20a9a06864b8e555c85dc2d03ab378 227 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 14 215 6.5E-37 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Y11_07751 4a20a9a06864b8e555c85dc2d03ab378 227 Pfam PF01914 MarC family integral membrane protein 8 218 1.4E-63 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Y11_36501 d3f6da3068762f7d945501fc8b86edd2 87 Gene3D G3DSA:3.30.1660.10 21 87 1.8E-24 T 13-10-2018 IPR025543 Dodecin-like Y11_36501 d3f6da3068762f7d945501fc8b86edd2 87 Pfam PF07338 Protein of unknown function (DUF1471) 34 87 6.4E-25 T 13-10-2018 IPR010854 Domain of unknown function DUF1471 Y11_36501 d3f6da3068762f7d945501fc8b86edd2 87 SUPERFAMILY SSF159871 3 87 1.57E-28 T 13-10-2018 IPR036275 YdgH-like superfamily Y11_35281 2c24257754572eadd80e74ef4e01dd1e 136 Pfam PF09621 Type III secretion system regulator (LcrR) 10 67 6.3E-5 T 13-10-2018 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 Y11_12291 47c173559ae1868cc3e425c5cc02e87d 482 PIRSF PIRSF006446 2 462 1.4E-229 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Y11_12291 47c173559ae1868cc3e425c5cc02e87d 482 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 2.4E-169 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Y11_41981 2dfaedb7dd287f1330df4353945fab62 136 Pfam PF02371 Transposase IS116/IS110/IS902 family 8 84 1.3E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_07831 a32ee0a632d8af73486a1ad75696a18f 59 Pfam PF13619 KTSC domain 2 53 1.6E-21 T 13-10-2018 IPR025309 KTSC domain Y11_35361 73ad488fef7a037b35e214e46262bdee 197 Pfam PF13327 Type III secretion system subunit 10 171 1.5E-57 T 13-10-2018 IPR025292 Type III secretion system protein Y11_30221 28387df83acc8694c071a2cbdc44c147 398 Gene3D G3DSA:3.40.640.10 1 396 3.2E-138 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Y11_30221 28387df83acc8694c071a2cbdc44c147 398 SUPERFAMILY SSF53383 31 389 1.2E-60 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Y11_30221 28387df83acc8694c071a2cbdc44c147 398 Pfam PF00155 Aminotransferase class I and II 47 372 4.1E-22 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Y11_14321 07fd28fcce565b0390c1e760fb9ed602 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 9.1E-31 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Y11_14321 07fd28fcce565b0390c1e760fb9ed602 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 9.1E-31 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Y11_14321 07fd28fcce565b0390c1e760fb9ed602 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 9.1E-31 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Y11_14321 07fd28fcce565b0390c1e760fb9ed602 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 9.1E-31 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Y11_14321 07fd28fcce565b0390c1e760fb9ed602 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 254 1.2E-76 T 13-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 Y11_14321 07fd28fcce565b0390c1e760fb9ed602 260 Pfam PF01311 Bacterial export proteins, family 1 14 246 1.4E-68 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Y11_26031 5dfed807cd43639732ddff2bff05ad89 331 SUPERFAMILY SSF51430 1 312 2.23E-103 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Y11_26031 5dfed807cd43639732ddff2bff05ad89 331 Gene3D G3DSA:3.20.20.100 1 330 1.1E-117 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Y11_26031 5dfed807cd43639732ddff2bff05ad89 331 Pfam PF00248 Aldo/keto reductase family 16 310 2.0E-75 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain Y11_40181 85994c50414f436044008c3bcfaf7585 66 Gene3D G3DSA:1.10.238.160 5 63 7.0E-6 T 13-10-2018 Y11_40181 85994c50414f436044008c3bcfaf7585 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 6 54 1.9E-18 T 13-10-2018 IPR010260 DNA-binding transcriptional activator AlpA Y11_30341 213f0c888766fdb36e212e9b8d7b53be 239 Pfam PF11254 Protein of unknown function (DUF3053) 17 234 7.7E-93 T 13-10-2018 IPR021413 Protein of unknown function DUF3053 Y11_33171 b70d389143afaca32d6ba78490d8c0c2 458 Pfam PF05598 Transposase domain (DUF772) 32 107 3.5E-23 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Y11_33171 b70d389143afaca32d6ba78490d8c0c2 458 Pfam PF13751 Transposase DDE domain 308 426 5.1E-26 T 13-10-2018 IPR025668 Transposase DDE domain Y11_01881 bd1ef672ab46aa9478c6e60f189a20b0 228 SUPERFAMILY SSF161098 8 205 1.57E-39 T 13-10-2018 IPR035906 MetI-like superfamily Y11_01881 bd1ef672ab46aa9478c6e60f189a20b0 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 114 5.3E-20 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Y11_01881 bd1ef672ab46aa9478c6e60f189a20b0 228 Gene3D G3DSA:1.10.3720.10 1 223 1.1E-50 T 13-10-2018 IPR035906 MetI-like superfamily Y11_01881 bd1ef672ab46aa9478c6e60f189a20b0 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 220 2.0E-23 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_21001 1e32116bbbf7bb2bba45bcd1a2ba7270 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 4.8E-156 T 13-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 Y11_21001 1e32116bbbf7bb2bba45bcd1a2ba7270 439 Pfam PF05525 Branched-chain amino acid transport protein 7 425 3.3E-152 T 13-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 Y11_15301 6f585b401f268660f61bf3dfb6b979d8 432 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 401 1.4E-108 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Y11_15301 6f585b401f268660f61bf3dfb6b979d8 432 PIRSF PIRSF006066 1 423 4.4E-165 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Y11_15301 6f585b401f268660f61bf3dfb6b979d8 432 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 402 4.6E-124 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Y11_07701 1a5a0dc1bb63350afac5d187ee32053e 291 Pfam PF00950 ABC 3 transport family 14 268 1.6E-97 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Y11_07701 1a5a0dc1bb63350afac5d187ee32053e 291 Gene3D G3DSA:1.10.3470.10 43 272 2.4E-9 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_07701 1a5a0dc1bb63350afac5d187ee32053e 291 SUPERFAMILY SSF81345 5 266 8.63E-45 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_06861 1a389e734dd86fb96a7d01ff6bcdef01 427 Pfam PF04945 YHS domain 368 414 1.5E-17 T 13-10-2018 IPR007029 YHS domain Y11_06861 1a389e734dd86fb96a7d01ff6bcdef01 427 Pfam PF10080 Predicted membrane protein (DUF2318) 257 360 4.4E-29 T 13-10-2018 IPR018758 Domain of unknown function DUF2318, membrane Y11_32001 dd6b262cb4edcbe3d7130d60304e3b3e 164 SUPERFAMILY SSF53271 2 162 4.59E-30 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Y11_32001 dd6b262cb4edcbe3d7130d60304e3b3e 164 Gene3D G3DSA:3.40.50.2020 42 163 8.6E-15 T 13-10-2018 Y11_00861 efea12925120f7aae4d8c30d9cd368c0 139 Pfam PF10697 Protein of unknown function (DUF2502) 44 131 2.5E-34 T 13-10-2018 IPR019638 Protein of unknown function DUF2502 Y11_16931 8a9d1559c4ac9cff75d66b3f64aac240 135 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 23.844 T 13-10-2018 IPR022957 Uncharacterised protein family UPF0299 Y11_16931 8a9d1559c4ac9cff75d66b3f64aac240 135 Pfam PF03788 LrgA family 23 113 3.6E-30 T 13-10-2018 IPR005538 LrgA/CidA family GO:0016021 Y11_27591 e0d6c60e51216ae4b08d4b21bc797bdc 691 Pfam PF01757 Acyltransferase family 8 334 1.1E-22 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Y11_06061 cc89180aed87657cc10798d4836d17dd 500 Pfam PF13520 Amino acid permease 9 440 1.2E-65 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_06061 cc89180aed87657cc10798d4836d17dd 500 PIRSF PIRSF006060 1 443 6.9E-47 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_06061 cc89180aed87657cc10798d4836d17dd 500 PIRSF PIRSF006060 443 500 4.0 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Y11_18791 fe1de52ab46c6c6298d883e3f7035aa8 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 63 2.6E-38 T 13-10-2018 IPR019663 Uncharacterised protein YbfA Y11_35681 77910440c4fdfbaf693f49fce6c6e3cd 334 Gene3D G3DSA:1.10.3470.10 4 334 4.4E-133 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_35681 77910440c4fdfbaf693f49fce6c6e3cd 334 SUPERFAMILY SSF81345 3 327 7.06E-88 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Y11_35681 77910440c4fdfbaf693f49fce6c6e3cd 334 Pfam PF01032 FecCD transport family 18 327 5.4E-95 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Y11_16751 e77355f4c4ca0c4c68fa0ffc02de923a 259 Pfam PF01061 ABC-2 type transporter 18 220 8.8E-17 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Y11_14881 747f74fe053296a8ca72ea4bfd142cbf 66 Pfam PF14001 YdfZ protein 3 66 3.2E-34 T 13-10-2018 IPR017704 Putative selenium-binding protein YdfZ Y11_14881 747f74fe053296a8ca72ea4bfd142cbf 66 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 2 66 6.2E-34 T 13-10-2018 IPR017704 Putative selenium-binding protein YdfZ Y11_10341 abf0d4e61a6d8145740dcfe5415a2e98 136 Pfam PF02371 Transposase IS116/IS110/IS902 family 8 84 1.8E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_p1021 87c9ba5f6499d34901dc65c0ea5bae8b 70 Pfam PF10881 Protein of unknown function (DUF2726) 2 48 6.4E-10 T 13-10-2018 IPR024402 Domain of unknown function DUF2726 Y11_41241 323d2ebdc6ba7e1f9b477389a8cdfc3d 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 6.0E-27 T 13-10-2018 IPR009624 Uncharacterised protein family UPF0253 Y11_41241 323d2ebdc6ba7e1f9b477389a8cdfc3d 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 25.618 T 13-10-2018 IPR009624 Uncharacterised protein family UPF0253 Y11_41241 323d2ebdc6ba7e1f9b477389a8cdfc3d 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 1.6E-35 T 13-10-2018 IPR009624 Uncharacterised protein family UPF0253 Y11_27681 5d491bbc910957b343f72894c6214841 955 Gene3D G3DSA:3.30.200.20 783 858 1.7E-25 T 13-10-2018 Y11_27681 5d491bbc910957b343f72894c6214841 955 Gene3D G3DSA:1.10.510.10 859 953 4.7E-23 T 13-10-2018 Y11_27681 5d491bbc910957b343f72894c6214841 955 SUPERFAMILY SSF56112 788 924 3.74E-10 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Y11_06151 b5b5406e95463598f56a16742ce5e540 89 Pfam PF13269 Protein of unknown function (DUF4060) 11 83 3.3E-40 T 13-10-2018 IPR025135 Protein of unknown function DUF4060 Y11_41621 c38670da170a7f3feae761baf206a9be 87 Pfam PF06392 Acid shock protein repeat 53 73 1.6E-4 T 13-10-2018 IPR009435 Acid shock GO:0010447|GO:0042597 Y11_19441 7c92104e08d42a36773b07321a24183f 531 Pfam PF00221 Aromatic amino acid lyase 19 495 1.2E-144 T 13-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 Y11_19441 7c92104e08d42a36773b07321a24183f 531 Gene3D G3DSA:1.10.275.10 10 204 2.3E-59 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal Y11_19441 7c92104e08d42a36773b07321a24183f 531 SUPERFAMILY SSF48557 11 523 5.65E-157 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 Y11_19441 7c92104e08d42a36773b07321a24183f 531 Gene3D G3DSA:1.20.200.10 205 527 4.1E-87 T 13-10-2018 Y11_12911 dacb618110060dd8a45c0e4a7e4ee72d 180 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 141 1.0E-57 T 13-10-2018 IPR006521 Tail protein I Y11_12911 dacb618110060dd8a45c0e4a7e4ee72d 180 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 141 3.3E-52 T 13-10-2018 IPR006521 Tail protein I Y11_23481 cbdc54a4808798c6d29802661da295d6 249 Pfam PF01925 Sulfite exporter TauE/SafE 15 240 1.1E-32 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Y11_03301 1bba0bbbc979b14b7eb7218c3a57b54e 159 Gene3D G3DSA:2.60.40.3590 50 159 1.2E-54 T 13-10-2018 Y11_40031 e7c0f344c926414bde950b192b982145 246 Gene3D G3DSA:3.30.450.20 47 166 9.8E-7 T 13-10-2018 Y11_40031 e7c0f344c926414bde950b192b982145 246 SUPERFAMILY SSF103190 52 170 2.31E-13 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Y11_40031 e7c0f344c926414bde950b192b982145 246 Pfam PF14827 Double sensory domain of two-component sensor kinase 57 168 1.7E-7 T 13-10-2018 IPR029150 Double Cache domain 3 Y11_10461 2ea2851fc4c31bc35e21a9c6833c7248 69 Pfam PF05433 Glycine zipper 2TM domain 32 68 6.1E-7 T 13-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 Y11_24071 453d179d3d80cc45d20b93cbe5eb3e01 272 SUPERFAMILY SSF103088 125 243 3.14E-19 T 13-10-2018 IPR036737 OmpA-like domain superfamily Y11_24071 453d179d3d80cc45d20b93cbe5eb3e01 272 Pfam PF00691 OmpA family 140 236 3.3E-13 T 13-10-2018 IPR006665 OmpA-like domain Y11_24071 453d179d3d80cc45d20b93cbe5eb3e01 272 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 1 37 2.7E-8 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain Y11_24071 453d179d3d80cc45d20b93cbe5eb3e01 272 Gene3D G3DSA:3.30.1330.60 71 259 1.1E-41 T 13-10-2018 IPR036737 OmpA-like domain superfamily Y11_p1091 a5fb6b0a47f9db6b7054ad995c711bae 288 TIGRFAM TIGR03474 incFII_RepA: incFII family plasmid replication initiator RepA 12 285 1.7E-181 T 13-10-2018 IPR017837 Plasmid replication initiator, RepA, IncFII type Y11_p1091 a5fb6b0a47f9db6b7054ad995c711bae 288 Pfam PF02387 IncFII RepA protein family 14 247 8.6E-30 T 13-10-2018 IPR003446 Plasmid replication initiation, RepA GO:0006276 Y11_42671 0bea2a088b8c820576bfbceed4cd5913 338 Pfam PF03824 High-affinity nickel-transport protein 74 324 2.3E-42 T 13-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 Y11_09611 a38ec0a0c700dfb683f8db68ac865d34 95 Pfam PF10734 Protein of unknown function (DUF2523) 9 88 1.4E-16 T 13-10-2018 IPR019670 Protein of unkown function DUF2523 Y11_19161 07b952e4a7745247135a134d4e0aeb9c 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 1.5E-54 T 13-10-2018 IPR009912 Zinc-ribbon containing domain Y11_39711 fffdd43329fdaab2253eb8a9905aa94f 204 Pfam PF03458 UPF0126 domain 4 78 1.0E-22 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 Y11_39711 fffdd43329fdaab2253eb8a9905aa94f 204 Pfam PF03458 UPF0126 domain 92 161 2.7E-19 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 Y11_19941 2ea1855fe06a234de4961454b72afee9 341 Pfam PF00953 Glycosyl transferase family 4 77 231 8.6E-31 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Y11_34561 4871a984ba1e33016687631e0dc684d5 89 Pfam PF02371 Transposase IS116/IS110/IS902 family 1 38 1.0E-9 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_15851 fa744bffea996f9ef355ec766caa8ce9 161 Pfam PF08786 DcrB 12 152 2.1E-27 T 13-10-2018 IPR014894 Protein DcrB Y11_15851 fa744bffea996f9ef355ec766caa8ce9 161 SUPERFAMILY SSF55724 5 156 1.41E-30 T 13-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Y11_15851 fa744bffea996f9ef355ec766caa8ce9 161 Gene3D G3DSA:3.40.1000.10 4 160 6.4E-30 T 13-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Y11_33791 8d9452f3a83b0cc215df423d14b9357a 240 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 13-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 Y11_33791 8d9452f3a83b0cc215df423d14b9357a 240 Gene3D G3DSA:1.20.1740.10 11 212 3.8E-21 T 13-10-2018 Y11_33791 8d9452f3a83b0cc215df423d14b9357a 240 Pfam PF00324 Amino acid permease 18 200 4.8E-46 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Y11_31471 e9071f1b63bb852612c6e1bb651e708b 498 Pfam PF01384 Phosphate transporter family 30 487 8.9E-89 T 13-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 Y11_27021 2f7d666c70f82eeb99d05a6e7af2935f 119 Pfam PF10828 Protein of unknown function (DUF2570) 13 109 3.7E-7 T 13-10-2018 IPR022538 Protein of unknown function DUF2570 Y11_38201 909bbdb7afb6c13552e66161c483ab15 210 Pfam PF13689 Domain of unknown function (DUF4154) 68 204 9.8E-34 T 13-10-2018 IPR025293 YfiR-like Y11_01411 a93a35e97693e5663484781a4e9ddb52 423 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 423 1.1E-137 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Y11_01411 a93a35e97693e5663484781a4e9ddb52 423 SUPERFAMILY SSF56935 26 423 2.93E-102 T 13-10-2018 Y11_01411 a93a35e97693e5663484781a4e9ddb52 423 Gene3D G3DSA:2.40.160.60 26 423 4.3E-140 T 13-10-2018 Y11_00801 fea8185ed881633b49b829250c528ca0 113 Pfam PF14282 FlxA-like protein 9 105 1.4E-21 T 13-10-2018 IPR025577 FlxA-like protein Y11_05011 9bd70adc08dddcd382a242cec397a2ee 144 Pfam PF07681 DoxX 20 98 2.8E-17 T 13-10-2018 IPR032808 DoxX family Y11_12791 d86a8bd5fa680b4ebd77535e5e723731 65 Pfam PF05125 Phage major capsid protein, P2 family 1 55 2.5E-20 T 13-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid Y11_08541 7800f145f11030f3e1f3027b58e9cd05 196 Pfam PF06930 Protein of unknown function (DUF1282) 8 179 1.2E-49 T 13-10-2018 IPR009698 Protein of unknown function DUF1282 Y11_06531 3c0b3809f28f2becd301973ae95a4ef2 113 Pfam PF10709 Protein of unknown function (DUF2511) 25 111 1.6E-42 T 13-10-2018 IPR019648 Protein of unknown function DUF2511 Y11_23671 0d3456757d655a55a5ded249dc9c6185 83 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 62 2.2E-24 T 13-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system Y11_p0181 fcfff014b02067cc55c9b9ad5062b8a8 51 Pfam PF01526 Tn3 transposase DDE domain 1 48 1.4E-16 T 13-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 Y11_30941 6fb277901f722cf6b2280d87d80143fd 98 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 88 4.8E-45 T 13-10-2018 IPR009610 CbtA toxin of type IV toxin-antitoxin system Y11_07471 9341182385c1c16dbe60a19b601d9d10 55 Pfam PF02371 Transposase IS116/IS110/IS902 family 2 47 4.1E-8 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_11441 ee2898b45cdf3f133cfb4d3a2d3c31e8 511 Pfam PF04293 SpoVR like protein 20 451 4.2E-175 T 13-10-2018 IPR007390 Sporulation stage V, protein R Y11_03291 90b6a357e474ab799caab2eba83e2418 101 ProDom PD022058 PSAF MYFF 1 100 5.0E-44 T 13-10-2018 IPR035182 Protein of unknown function PsaF Y11_03291 90b6a357e474ab799caab2eba83e2418 101 Pfam PF17550 Family of unknown function 1 99 1.4E-39 T 13-10-2018 IPR035182 Protein of unknown function PsaF Y11_18951 5f9b4731ed865c4e42f6322e35d61154 108 Pfam PF13982 YbfN-like lipoprotein 22 108 7.6E-47 T 13-10-2018 IPR025727 YbfN-like lipoprotein Y11_35901 c8444ab7b898681f4cf40b1bd737d446 112 Pfam PF13698 Domain of unknown function (DUF4156) 22 111 2.4E-30 T 13-10-2018 IPR025294 Protein of unknown function DUF4156 Y11_24921 da15106db4058a3398c6bccd9d36e42b 229 Pfam PF06693 Protein of unknown function (DUF1190) 41 213 4.2E-54 T 13-10-2018 IPR009576 Biofilm formation YgiB Y11_24921 da15106db4058a3398c6bccd9d36e42b 229 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 229 46.189 T 13-10-2018 IPR009576 Biofilm formation YgiB Y11_16971 1789a74e7ccea98e5aec40808ecfe2fc 281 Pfam PF02698 DUF218 domain 48 170 1.6E-18 T 13-10-2018 IPR003848 Domain of unknown function DUF218 Y11_16971 1789a74e7ccea98e5aec40808ecfe2fc 281 PIRSF PIRSF005011 1 248 3.0E-150 T 13-10-2018 IPR023604 Uncharacterised protein family SanA Y11_p0701 5bee04ff0062161e7a026a1e42ece05f 100 TIGRFAM TIGR02567 YscW: type III secretion system chaperone YscW 1 94 1.4E-38 T 13-10-2018 IPR013400 Type III secretion system chaperone, YscW Y11_p0701 5bee04ff0062161e7a026a1e42ece05f 100 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 4 84 3.9E-10 T 13-10-2018 IPR039366 YscW/ExsB Y11_p0701 5bee04ff0062161e7a026a1e42ece05f 100 Gene3D G3DSA:2.60.40.2990 1 100 1.8E-34 T 13-10-2018 Y11_26341 60d5bd4dfe44b2d1f7224e1f3f5378dd 134 Pfam PF06295 Protein of unknown function (DUF1043) 6 127 6.4E-51 T 13-10-2018 IPR009386 Protein of unknown function DUF1043 Y11_26341 60d5bd4dfe44b2d1f7224e1f3f5378dd 134 PIRSF PIRSF006318 1 134 2.0E-52 T 13-10-2018 IPR009386 Protein of unknown function DUF1043 Y11_07791 739b94f5b810b79b1a000ae68554d64c 46 Gene3D G3DSA:3.10.450.50 1 46 2.7E-7 T 13-10-2018 Y11_p0101 2456fba8536618cea4a8c9d0b55be9da 130 Gene3D G3DSA:3.30.1460.10 1 130 3.6E-61 T 13-10-2018 Y11_p0101 2456fba8536618cea4a8c9d0b55be9da 130 Pfam PF05932 Tir chaperone protein (CesT) family 8 110 9.1E-9 T 13-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 Y11_p0101 2456fba8536618cea4a8c9d0b55be9da 130 SUPERFAMILY SSF69635 4 126 8.16E-40 T 13-10-2018 Y11_13841 9ed63aed4122ed156bda204c6dd8df57 286 Pfam PF03239 Iron permease FTR1 family 1 267 1.2E-68 T 13-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 Y11_19631 fc1dc4c175ba591a3925cb9948ed2dd7 363 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 74 300 4.3E-27 T 13-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system Y11_12901 dae1303681c8219c712c1f5bfea98faa 302 Pfam PF04865 Baseplate J-like protein 118 261 1.9E-26 T 13-10-2018 IPR006949 Baseplate protein J-like Y11_12901 dae1303681c8219c712c1f5bfea98faa 302 PIRSF PIRSF020481 1 302 7.9E-129 T 13-10-2018 IPR014507 Baseplate assembly protein J, predicted Y11_22301 11d38277bf114a174d02dd5bca368af5 348 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 323 7.1E-33 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_30161 6254bb374333577111d011de81dd3c9f 112 Pfam PF07119 Protein of unknown function (DUF1375) 13 76 1.3E-15 T 13-10-2018 IPR010780 Protein of unknown function DUF1375 Y11_12781 b5e924b78a21b28d4b21a766b87d0d57 74 SUPERFAMILY SSF53098 26 71 6.57E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Y11_29841 15745a333e94273a671892a1b96eee32 155 Pfam PF04519 Polymer-forming cytoskeletal 24 120 1.1E-18 T 13-10-2018 IPR007607 Bactofilin A/B Y11_37381 e05ecb880ebad03301bf31cb20f37551 77 Pfam PF13708 Domain of unknown function (DUF4942) 1 71 2.6E-19 T 13-10-2018 IPR031339 Domain of unknown function DUF4942 Y11_25521 8b822f7f10bde17b75d2c88330bd7a60 169 Pfam PF06892 Phage regulatory protein CII (CP76) 4 160 3.7E-62 T 13-10-2018 IPR009679 Bacteriophage 186, CII Y11_20361 487ac11c86e6dfe0c7090cf9fd35cd3a 176 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 48 152 5.4E-42 T 13-10-2018 IPR039366 YscW/ExsB Y11_01501 ba3ad358b6067a7f8e712d8c6b22aa85 268 Pfam PF01925 Sulfite exporter TauE/SafE 14 248 6.5E-46 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Y11_29211 419ae4bbf14f4c8d4bbe1632cf85537c 150 Pfam PF02371 Transposase IS116/IS110/IS902 family 22 98 7.3E-27 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_13181 61554a22cce00a809024eeda584883b9 760 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 140 469 1.5E-98 T 13-10-2018 IPR008766 Replication gene A protein GO:0006260 Y11_33851 f46c681a7f7f471798f40b5dd44ee09f 248 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 1.3E-44 T 13-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Y11_33851 f46c681a7f7f471798f40b5dd44ee09f 248 SUPERFAMILY SSF69618 1 247 7.85E-57 T 13-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Y11_33851 f46c681a7f7f471798f40b5dd44ee09f 248 Gene3D G3DSA:3.40.50.10090 32 165 5.7E-69 T 13-10-2018 Y11_33851 f46c681a7f7f471798f40b5dd44ee09f 248 Gene3D G3DSA:3.40.50.10090 4 245 5.7E-69 T 13-10-2018 Y11_39971 15ab857b3ec9115752a193e958c1fe0a 136 Pfam PF02371 Transposase IS116/IS110/IS902 family 8 84 4.0E-27 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_17171 5907fe3c3915c1b325b930ca59a0cfb2 330 SUPERFAMILY SSF53822 24 329 1.04E-85 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Y11_17171 5907fe3c3915c1b325b930ca59a0cfb2 330 Pfam PF13407 Periplasmic binding protein domain 27 298 1.5E-65 T 13-10-2018 IPR025997 Periplasmic binding protein Y11_17171 5907fe3c3915c1b325b930ca59a0cfb2 330 Gene3D G3DSA:3.40.50.2300 27 301 4.1E-123 T 13-10-2018 Y11_17171 5907fe3c3915c1b325b930ca59a0cfb2 330 Gene3D G3DSA:3.40.50.2300 133 278 4.1E-123 T 13-10-2018 Y11_32751 ecc31f7712faa8c2eee1a8e6b70bc0da 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 16.74 T 13-10-2018 IPR007236 SlyX Y11_32751 ecc31f7712faa8c2eee1a8e6b70bc0da 72 Pfam PF04102 SlyX 7 72 2.7E-24 T 13-10-2018 IPR007236 SlyX Y11_32661 c65f016179d5eeca3a8bde62d0cbbb0b 296 Gene3D G3DSA:1.10.3720.10 91 289 3.4E-29 T 13-10-2018 IPR035906 MetI-like superfamily Y11_32661 c65f016179d5eeca3a8bde62d0cbbb0b 296 SUPERFAMILY SSF161098 96 278 1.15E-35 T 13-10-2018 IPR035906 MetI-like superfamily Y11_32661 c65f016179d5eeca3a8bde62d0cbbb0b 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 290 2.7E-25 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Y11_37801 26040fecfbbacda78c694ad6350e9b12 288 Pfam PF10014 2OG-Fe dioxygenase 93 282 9.7E-30 T 13-10-2018 IPR018724 2OG-Fe dioxygenase Y11_37801 26040fecfbbacda78c694ad6350e9b12 288 Gene3D G3DSA:2.60.120.620 83 287 7.6E-27 T 13-10-2018 Y11_10831 0d2205d89c768a0677ec6a4c129067f4 138 Pfam PF03692 Putative zinc- or iron-chelating domain 7 98 1.3E-9 T 13-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Y11_31231 9f8c19e6763833825b9924d6ae800f45 260 SUPERFAMILY SSF48452 61 212 2.52E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_31231 9f8c19e6763833825b9924d6ae800f45 260 Gene3D G3DSA:1.25.40.10 44 257 3.3E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Y11_05231 c6f8ea9ec24fbd9df2084dcb300e8472 176 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 6.5E-17 T 13-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Y11_22031 045ea31fa091a9178e336fbe9d649f15 255 Pfam PF04338 Protein of unknown function, DUF481 50 254 4.6E-56 T 13-10-2018 IPR007433 Protein of unknown function DUF481 Y11_01181 2f173862604ceb64047201a27e5ad10c 163 Gene3D G3DSA:3.40.50.1820 1 131 5.0E-34 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_01181 2f173862604ceb64047201a27e5ad10c 163 Pfam PF07859 alpha/beta hydrolase fold 1 95 2.5E-17 T 13-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 Y11_01181 2f173862604ceb64047201a27e5ad10c 163 SUPERFAMILY SSF53474 1 99 2.6E-26 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Y11_05511 c7fb6366e8308ac85fd74a068b377994 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 2.5E-10 T 13-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 Y11_19461 15db4be459f11c986eee415a7091eb5e 62 SUPERFAMILY SSF53850 5 57 8.51E-5 T 13-10-2018 Y11_19461 15db4be459f11c986eee415a7091eb5e 62 Gene3D G3DSA:3.40.190.290 4 57 9.2E-6 T 13-10-2018 Y11_04951 4c784bc68d1fed4f7d590f5f0ac6cc18 379 Pfam PF01757 Acyltransferase family 10 357 8.8E-31 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Y11_04951 4c784bc68d1fed4f7d590f5f0ac6cc18 379 Hamap MF_01066 Glucans biosynthesis protein C [mdoC]. 1 376 37.349 T 13-10-2018 IPR023723 Glucan biosynthesis protein C GO:0016741 Y11_00191 1758bc4479233799979a125fb218f98f 216 Pfam PF02371 Transposase IS116/IS110/IS902 family 92 168 5.0E-22 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_28031 901e1deae492c2362d141e161d65e365 204 Pfam PF06438 Heme-binding protein A (HasA) 1 204 7.1E-71 T 13-10-2018 IPR010495 Haem-binding HasA Y11_28031 901e1deae492c2362d141e161d65e365 204 Gene3D G3DSA:3.30.1500.10 1 192 9.2E-74 T 13-10-2018 IPR036912 Haem-binding HasA superfamily Y11_28031 901e1deae492c2362d141e161d65e365 204 SUPERFAMILY SSF54621 2 174 1.7E-38 T 13-10-2018 IPR036912 Haem-binding HasA superfamily Y11_40331 6e6983eaeaaae4defa0e69615f1aa77b 93 Pfam PF00263 Bacterial type II and III secretion system protein 1 33 5.8E-8 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Y11_22671 d8c451153c2068cd07c7fc262990f706 91 SUPERFAMILY SSF49401 8 85 4.54E-16 T 13-10-2018 IPR008966 Adhesion domain superfamily Y11_22671 d8c451153c2068cd07c7fc262990f706 91 Gene3D G3DSA:2.60.40.1090 7 90 3.4E-10 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Y11_09561 224fb03f022eecf5347518fcd7ab7c0a 379 Pfam PF12698 ABC-2 family transporter protein 21 366 9.4E-19 T 13-10-2018 Y11_24681 113dc434964b30c176fdc1d7981aa7a9 154 Pfam PF07811 TadE-like protein 14 55 4.5E-5 T 13-10-2018 IPR012495 TadE-like Y11_22821 a397777e1173ea5ef56f21fa9508d796 105 Pfam PF12084 Protein of unknown function (DUF3561) 1 104 1.6E-45 T 13-10-2018 IPR022721 Protein of unknown function DUF3561 Y11_22821 a397777e1173ea5ef56f21fa9508d796 105 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 18 105 3.0E-38 T 13-10-2018 IPR022721 Protein of unknown function DUF3561 Y11_14871 39c22d2855fbbc4f2a7aaf3cd060db78 219 Pfam PF11004 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 4 218 1.3E-93 T 13-10-2018 IPR021266 Kdo hydroxylase Y11_p0051 c97ded4c3037f109cfe34005810fb800 288 Pfam PF03421 YopJ Serine/Threonine acetyltransferase 26 198 9.0E-62 T 13-10-2018 IPR005083 Serine/Threonine acetyltransferase, YopJ Y11_15211 4dd949746acd98ff2bdb1fe2b06efd60 46 Gene3D G3DSA:3.40.50.1980 1 44 1.2E-8 T 13-10-2018 Y11_37421 405dac2eb3d78cf1f2ee9d45bfd0a3bc 62 SUPERFAMILY SSF48295 4 49 3.87E-9 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Y11_p0191 214d4babd2fb2eeef202920d4763f7c3 214 Pfam PF01526 Tn3 transposase DDE domain 2 180 1.1E-64 T 13-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 Y11_15791 034e9f0df53ede1bbab342f476f2700b 382 Pfam PF06812 ImpA, N-terminal, type VI secretion system 17 140 1.2E-26 T 13-10-2018 IPR010657 ImpA, N-terminal Y11_11261 697e43611c3548442bfec07f868c8849 136 Pfam PF02371 Transposase IS116/IS110/IS902 family 8 84 1.8E-26 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_13561 cb44ff17b66a99bc358c8a442207e91d 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 2.0E-38 T 13-10-2018 Y11_13601 71b647b0269e0355607cb25ef6428634 109 SUPERFAMILY SSF51182 30 107 1.93E-7 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Y11_28431 b921755b17b7f8059de753036e930948 150 Pfam PF06995 Phage P2 GpU 6 125 4.4E-43 T 13-10-2018 IPR009734 Myoviridae, GpU Y11_28431 b921755b17b7f8059de753036e930948 150 PIRSF PIRSF029208 1 147 2.3E-58 T 13-10-2018 IPR016912 Bacteriophage P2, GpU Y11_21721 77cccfb54c8aef8de3e78f73099d72c3 66 Pfam PF13318 Protein of unknown function (DUF4089) 15 64 4.5E-20 T 13-10-2018 IPR025148 Protein of unknown function DUF4089 Y11_02841 36462030851d3d76953b6b42c250ed75 119 Pfam PF06530 Phage antitermination protein Q 20 79 1.1E-15 T 13-10-2018 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 Y11_07051 f8a6a0355a8701deb96f694d55e333f6 262 Pfam PF02562 PhoH-like protein 57 261 6.4E-76 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 Y11_07051 f8a6a0355a8701deb96f694d55e333f6 262 SUPERFAMILY SSF52540 57 239 2.9E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y11_07051 f8a6a0355a8701deb96f694d55e333f6 262 Gene3D G3DSA:3.40.50.300 54 262 4.8E-64 T 13-10-2018 Y11_29031 be0e24ff2af506682c2241846989e367 251 Pfam PF05598 Transposase domain (DUF772) 52 127 1.2E-23 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Y11_42561 840a79f0c7685da62b07641ff6ad51dd 431 Pfam PF10797 Protein of unknown function 5 428 1.5E-166 T 13-10-2018 IPR019733 Uncharacterised protein family YhfT Y11_22241 53a30c7919c157d8ca7b04671f608199 283 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 276 6.3E-96 T 13-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 Y11_14971 d98650f975818c143887287caf83054a 213 Pfam PF06551 Protein of unknown function (DUF1120) 30 99 1.9E-5 T 13-10-2018 IPR010546 Protein of unknown function DUF1120 Y11_33841 d42c4d7154f96dd3d507f8e6ffea69cc 374 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 32 362 2.3E-143 T 13-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX Y11_08071 589d558ca1482b44f933b3282ffc3f99 499 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 19 485 45.138 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 Y11_08071 589d558ca1482b44f933b3282ffc3f99 499 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 22 469 1.7E-154 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 Y11_24251 5779aeb93f613196328db8e168972438 97 Pfam PF10135 Rod binding protein 42 93 1.6E-11 T 13-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal Y11_p0901 78c3f2954992d5fce5086800180e29ee 306 Pfam PF05844 YopD protein 13 306 2.8E-153 T 13-10-2018 IPR008898 YopD-like Y11_09301 6d91745add604399870015087bc73f45 808 PIRSF PIRSF034586 448 807 4.4E-119 T 13-10-2018 IPR017030 Virulence effector, SrfC Y11_09301 6d91745add604399870015087bc73f45 808 PIRSF PIRSF034586 1 455 8.5E-176 T 13-10-2018 IPR017030 Virulence effector, SrfC Y11_09301 6d91745add604399870015087bc73f45 808 Pfam PF10139 Putative bacterial virulence factor 24 460 2.0E-131 T 13-10-2018 IPR017030 Virulence effector, SrfC Y11_09301 6d91745add604399870015087bc73f45 808 Pfam PF10139 Putative bacterial virulence factor 455 799 1.7E-65 T 13-10-2018 IPR017030 Virulence effector, SrfC Y11_28451 6cfd84725e9efb5b5e8c5cae158b8698 44 Pfam PF06528 Phage P2 GpE 1 35 1.1E-20 T 13-10-2018 IPR009493 Burkholderia phage phiE202, Gp27 Y11_18351 ed30cbb51516b6d41218e61f65647b85 111 Pfam PF07769 psiF repeat 33 65 1.6E-16 T 13-10-2018 IPR011690 Phosphate-starvation-induced PsiF repeat Y11_18351 ed30cbb51516b6d41218e61f65647b85 111 Pfam PF07769 psiF repeat 76 108 6.6E-19 T 13-10-2018 IPR011690 Phosphate-starvation-induced PsiF repeat Y11_02061 8d8183a8182b9411983b68a5fce0e870 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 36.392 T 13-10-2018 IPR007334 Uncharacterised protein family UPF0208 Y11_02061 8d8183a8182b9411983b68a5fce0e870 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 2.8E-60 T 13-10-2018 IPR007334 Uncharacterised protein family UPF0208 Y11_24101 f479278637213514e685b3664177e9a0 155 Pfam PF03748 Flagellar basal body-associated protein FliL 56 155 5.1E-11 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Y11_22601 45e680552965d04fc81207f5116eb3f8 270 Gene3D G3DSA:2.60.40.1090 157 270 6.0E-7 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Y11_20161 b78a30f856f1a7a13822d985a480acf2 212 Pfam PF13751 Transposase DDE domain 62 180 2.1E-27 T 13-10-2018 IPR025668 Transposase DDE domain Y11_36311 48efb1e803d78a6f159f9d615128095a 150 Pfam PF12582 Protein of unknown function (DUF3757) 19 142 5.9E-32 T 13-10-2018 IPR022231 Protein of unknown function DUF3757 Y11_14951 314ab3043029c02974068d37d1348c38 216 Pfam PF06551 Protein of unknown function (DUF1120) 31 101 1.4E-7 T 13-10-2018 IPR010546 Protein of unknown function DUF1120 Y11_33141 f045d855b6cef8a8de74f2c379351b87 123 Pfam PF09350 Domain of unknown function (DUF1992) 7 73 4.0E-22 T 13-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain Y11_37101 6193b32c6a279a76e119f9457985169b 278 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 278 5.0E-114 T 13-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 Y11_13141 d67a33cd2f24d517fde08b17c4b46b7b 169 Pfam PF06892 Phage regulatory protein CII (CP76) 4 160 4.8E-62 T 13-10-2018 IPR009679 Bacteriophage 186, CII Y11_14511 c6151226ec6073297705011946c3cb61 111 Pfam PF06366 Flagellar protein FlhE 6 111 9.5E-37 T 13-10-2018 IPR009420 Flagellar protein FlhE Y11_35871 beb4dc07ed3292d35cabb568034daaac 175 Pfam PF04186 FxsA cytoplasmic membrane protein 8 109 1.3E-32 T 13-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 Y11_18521 cad0a5c64d580979296e57690eb4dc79 43 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 1 40 1.3E-14 T 13-10-2018 IPR011846 Cyd operon protein YbgE Y11_18431 b88a2cfb417c6bcb6f5502b98193e7b7 242 Pfam PF04973 Nicotinamide mononucleotide transporter 23 227 2.2E-53 T 13-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 Y11_18431 b88a2cfb417c6bcb6f5502b98193e7b7 242 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 229 3.1E-63 T 13-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 Y11_33901 511d32cfcc655afa41754696666604d1 67 Pfam PF13627 Prokaryotic lipoprotein-attachment site 12 29 2.1E-8 T 13-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site Y11_30631 048f1f89b5a583922d2e6e0080b9c0db 392 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 382 1.6E-49 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_10481 895716ced96e055588977c48cc1afe9d 263 Pfam PF01548 Transposase 16 156 2.0E-12 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Y11_10481 895716ced96e055588977c48cc1afe9d 263 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 256 2.6E-6 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Y11_24661 12b51ac12068b85c2f87df1334064c1a 274 Pfam PF00482 Type II secretion system (T2SS), protein F 135 263 7.8E-12 T 13-10-2018 IPR018076 Type II secretion system F domain Y11_36831 fd821150d4662fffdf5e160fe6d225b6 292 Pfam PF01136 Peptidase family U32 92 198 3.5E-11 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Y11_p1031 a8725021d7ce394f8c00b4fec40620ef 88 Pfam PF05857 TraX protein 1 70 2.0E-14 T 13-10-2018 IPR008875 TraX Y11_09161 10f043cf2ee7270db451772f3b6cd651 172 Pfam PF04463 Protein of unknown function (DUF523) 8 151 2.8E-41 T 13-10-2018 IPR007553 Domain of unknown function DUF523 Y11_25471 9dcfc02f63e4c7b1b162076c4a0c16f4 759 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 139 468 2.3E-98 T 13-10-2018 IPR008766 Replication gene A protein GO:0006260 Y11_25681 36bc3a85f48a3711edc5cf8f506b2cd7 190 Pfam PF03729 Short repeat of unknown function (DUF308) 84 152 3.6E-9 T 13-10-2018 IPR005325 Protein of unknown function DUF308, membrane Y11_25681 36bc3a85f48a3711edc5cf8f506b2cd7 190 Pfam PF03729 Short repeat of unknown function (DUF308) 26 97 1.4E-12 T 13-10-2018 IPR005325 Protein of unknown function DUF308, membrane Y11_28351 c1d516650ef8289f6fff9d4d73f5ac6d 201 Pfam PF07305 Protein of unknown function (DUF1454) 8 200 5.6E-85 T 13-10-2018 IPR009918 Protein of unknown function DUF1454 Y11_17891 98f9df23615dbb3a979adc2f65f549d6 82 Pfam PF04226 Transglycosylase associated protein 33 81 3.4E-15 T 13-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 Y11_19591 e97354de77c4e7fc9c4122044162dcf1 776 Gene3D G3DSA:3.40.50.450 16 138 1.3E-7 T 13-10-2018 Y11_31511 4838004499d3b6beac236fe9df8de04f 457 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 63 308 1.5E-19 T 13-10-2018 IPR010839 Acyclic terpene utilisation Y11_08451 b06cb3092aa35a9b6734a90097bc9929 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 1.3E-7 T 13-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 Y11_03621 3abdb0ea9bd97bcff9802e6f4abc04d8 102 Pfam PF07214 Protein of unknown function (DUF1418) 1 96 4.2E-40 T 13-10-2018 IPR010815 Protein of unknown function DUF1418 Y11_37611 df29d043a67ba30f4b231bb345d2205e 365 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 307 3.6E-44 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Y11_42321 8cb507696090ef7e867ad6b44c95e193 79 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 1 65 6.0E-14 T 13-10-2018 Y11_24691 70b89e2cfc916202adcd64e8330dcb32 192 Pfam PF16964 Putative tight adherence pilin protein F 9 192 8.3E-43 T 13-10-2018 IPR031582 Putative tight adherence pilin protein F Y11_12601 3a5eeb84917bcc80b80c06bce39227cb 70 Pfam PF10762 Protein of unknown function (DUF2583) 1 67 8.4E-35 T 13-10-2018 IPR019698 Protein of unknown function DUF2583 Y11_p0081 064e07069178d90ec30b93b1d6b8d5b6 182 PIRSF PIRSF007043 1 182 9.4E-129 T 13-10-2018 IPR016505 Type III secretion system YopQ Y11_15291 969fa995fcf85c7602d96f5050f75538 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 153 2.5E-23 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Y11_38401 58b104697e09e3647144523abb4030b6 262 Pfam PF01184 GPR1/FUN34/yaaH family 68 246 2.0E-43 T 13-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 Y11_28661 94b6b6b0416338878f45c54e76634f74 693 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 139 468 2.3E-100 T 13-10-2018 IPR008766 Replication gene A protein GO:0006260