locus-tag class description AW19_1 PF00109 Beta-ketoacyl synthase, N-terminal domain AW19_1 PF02801 Beta-ketoacyl synthase, C-terminal domain AW19_10 PF00107 Zinc-binding dehydrogenase AW19_10 PF08240 Alcohol dehydrogenase GroES-like domain AW19_100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AW19_1000 PF01926 50S ribosome-binding GTPase AW19_1000 PF06071 Protein of unknown function (DUF933) AW19_1002 PF01195 Peptidyl-tRNA hydrolase AW19_1003 PF10762 Protein of unknown function (DUF2583) AW19_1004 PF14572 Phosphoribosyl synthetase-associated domain AW19_1004 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AW19_1005 PF08544 GHMP kinases C terminal AW19_1005 PF00288 GHMP kinases N terminal domain AW19_1006 PF03550 Outer membrane lipoprotein LolB AW19_1007 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AW19_1007 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AW19_1007 PF01488 Shikimate / quinate 5-dehydrogenase AW19_1008 PF03462 PCRF domain AW19_1008 PF00472 RF-1 domain AW19_1009 PF13847 Methyltransferase domain AW19_1009 PF17827 PrmC N-terminal domain AW19_101 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1010 PF04247 Invasion gene expression up-regulator, SirB AW19_1011 PF13369 Transglutaminase-like superfamily AW19_1012 PF00793 DAHP synthetase I family AW19_1013 PF00916 Sulfate permease family AW19_1013 PF01740 STAS domain AW19_1016 PF03009 Glycerophosphoryl diester phosphodiesterase family AW19_1019 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AW19_102 PF00528 Binding-protein-dependent transport system inner membrane component AW19_102 PF12911 N-terminal TM domain of oligopeptide transport permease C AW19_1020 PF02811 PHP domain AW19_1021 PF02613 Nitrate reductase delta subunit AW19_1022 PF07273 Protein of unknown function (DUF1439) AW19_1023 PF07690 Major Facilitator Superfamily AW19_1024 PF13302 Acetyltransferase (GNAT) domain AW19_1025 PF04337 Protein of unknown function, DUF480 AW19_1026 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AW19_1027 PF03023 Lipid II flippase MurJ AW19_1028 PF05746 DALR anticodon binding domain AW19_1028 PF00750 tRNA synthetases class I (R) AW19_1028 PF03485 Arginyl tRNA synthetase N terminal domain AW19_1029 PF06185 YecM protein AW19_103 PF00005 ABC transporter AW19_1030 PF03932 CutC family AW19_1031 PF08003 Protein of unknown function (DUF1698) AW19_1032 PF13649 Methyltransferase domain AW19_1033 PF01124 MAPEG family AW19_1034 PF01904 Protein of unknown function DUF72 AW19_1035 PF00857 Isochorismatase family AW19_1036 PF02938 GAD domain AW19_1036 PF00152 tRNA synthetases class II (D, K and N) AW19_1036 PF01336 OB-fold nucleic acid binding domain AW19_1037 PF00293 NUDIX domain AW19_1038 PF01709 Transcriptional regulator AW19_1039 PF02075 Crossover junction endodeoxyribonuclease RuvC AW19_104 PF00005 ABC transporter AW19_1040 PF01330 RuvA N terminal domain AW19_1040 PF07499 RuvA, C-terminal domain AW19_1041 PF05491 RuvB C-terminal winged helix domain AW19_1041 PF17864 RuvB AAA lid domain AW19_1041 PF05496 Holliday junction DNA helicase RuvB P-loop domain AW19_1042 PF00854 POT family AW19_1043 PF00950 ABC 3 transport family AW19_1044 PF00005 ABC transporter AW19_1045 PF01297 Zinc-uptake complex component A periplasmic AW19_1046 PF08525 Opacity-associated protein A N-terminal motif AW19_1046 PF01551 Peptidase family M23 AW19_1046 PF01476 LysM domain AW19_1047 PF03279 Bacterial lipid A biosynthesis acyltransferase AW19_1048 PF02887 Pyruvate kinase, alpha/beta domain AW19_1048 PF00224 Pyruvate kinase, barrel domain AW19_1049 PF01380 SIS domain AW19_1049 PF01418 Helix-turn-helix domain, rpiR family AW19_1050 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AW19_1050 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AW19_1051 PF01081 KDPG and KHG aldolase AW19_1052 PF00893 Small Multidrug Resistance protein AW19_1053 PF00893 Small Multidrug Resistance protein AW19_1054 PF01042 Endoribonuclease L-PSP AW19_1055 PF13307 Helicase C-terminal domain AW19_1055 PF04851 Type III restriction enzyme, res subunit AW19_1056 PF00814 Glycoprotease family AW19_1057 PF03843 Outer membrane lipoprotein Slp family AW19_1058 PF00501 AMP-binding enzyme AW19_1058 PF13193 AMP-binding enzyme C-terminal domain AW19_1059 PF00570 HRDC domain AW19_1059 PF01612 3'-5' exonuclease AW19_106 PF00547 Urease, gamma subunit AW19_1060 PF03776 Septum formation topological specificity factor MinE AW19_1061 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AW19_1062 PF05209 Septum formation inhibitor MinC, N-terminal domain AW19_1062 PF03775 Septum formation inhibitor MinC, C-terminal domain AW19_1064 PF05166 YcgL domain AW19_1065 PF13406 Transglycosylase SLT domain AW19_1066 PF01557 Fumarylacetoacetate (FAA) hydrolase family AW19_1067 PF03692 Putative zinc- or iron-chelating domain AW19_1069 PF00132 Bacterial transferase hexapeptide (six repeats) AW19_1069 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AW19_107 PF00699 Urease beta subunit AW19_1070 PF02600 Disulfide bond formation protein DsbB AW19_1071 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AW19_1072 PF00392 Bacterial regulatory proteins, gntR family AW19_1072 PF07840 FadR C-terminal domain AW19_1073 PF04293 SpoVR like protein AW19_1074 PF01266 FAD dependent oxidoreductase AW19_1075 PF01168 Alanine racemase, N-terminal domain AW19_1075 PF00842 Alanine racemase, C-terminal domain AW19_1076 PF07690 Major Facilitator Superfamily AW19_1077 PF00563 EAL domain AW19_1077 PF13426 PAS domain AW19_1077 PF00990 Diguanylate cyclase, GGDEF domain AW19_1078 PF05726 Pirin C-terminal cupin domain AW19_1078 PF02678 Pirin AW19_1079 PF03466 LysR substrate binding domain AW19_1079 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_108 PF00449 Urease alpha-subunit, N-terminal domain AW19_108 PF01979 Amidohydrolase family AW19_1081 PF04285 Protein of unknown function (DUF444) AW19_1082 PF06798 PrkA serine protein kinase C-terminal domain AW19_1082 PF08298 PrkA AAA domain AW19_1083 PF06629 MltA-interacting protein MipA AW19_1084 PF01263 Aldose 1-epimerase AW19_1085 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AW19_1085 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AW19_1086 PF01641 SelR domain AW19_1087 PF07023 Protein of unknown function (DUF1315) AW19_1088 PF00857 Isochorismatase family AW19_1089 PF00710 Asparaginase, N-terminal AW19_1089 PF17763 Glutaminase/Asparaginase C-terminal domain AW19_109 PF05194 UreE urease accessory protein, C-terminal domain AW19_109 PF02814 UreE urease accessory protein, N-terminal domain AW19_1090 PF01343 Peptidase family S49 AW19_1091 PF00881 Nitroreductase family AW19_1092 PF00586 AIR synthase related protein, N-terminal domain AW19_1092 PF02769 AIR synthase related protein, C-terminal domain AW19_1093 PF01131 DNA topoisomerase AW19_1093 PF01751 Toprim domain AW19_1094 PF07383 Protein of unknown function (DUF1496) AW19_1095 PF00293 NUDIX domain AW19_1096 PF03372 Endonuclease/Exonuclease/phosphatase family AW19_1097 PF03466 LysR substrate binding domain AW19_1097 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_11 PF03613 PTS system mannose/fructose/sorbose family IID component AW19_110 PF01730 UreF AW19_1101 PF00551 Formyl transferase AW19_1101 PF01842 ACT domain AW19_1102 PF02810 SEC-C motif AW19_1104 PF01734 Patatin-like phospholipase AW19_1105 PF00072 Response regulator receiver domain AW19_1106 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AW19_1106 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AW19_1106 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AW19_1107 PF00816 H-NS histone family AW19_1108 PF00265 Thymidine kinase AW19_1109 PF01527 Transposase AW19_111 PF02492 CobW/HypB/UreG, nucleotide-binding domain AW19_1110 PF00665 Integrase core domain AW19_1111 PF00465 Iron-containing alcohol dehydrogenase AW19_1111 PF00171 Aldehyde dehydrogenase family AW19_1112 PF01914 MarC family integral membrane protein AW19_1113 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AW19_1114 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AW19_1115 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1116 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1116 PF12911 N-terminal TM domain of oligopeptide transport permease C AW19_1117 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AW19_1117 PF00005 ABC transporter AW19_1118 PF00005 ABC transporter AW19_1118 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AW19_1119 PF04269 Protein of unknown function, DUF440 AW19_112 PF01774 UreD urease accessory protein AW19_1120 PF13091 PLD-like domain AW19_1120 PF13396 Phospholipase_D-nuclease N-terminal AW19_1121 PF00563 EAL domain AW19_1124 PF03795 YCII-related domain AW19_1125 PF03544 Gram-negative bacterial TonB protein C-terminal AW19_1126 PF03061 Thioesterase superfamily AW19_1127 PF04279 Intracellular septation protein A AW19_113 PF03253 Urea transporter AW19_1130 PF03922 OmpW family AW19_1132 PF00290 Tryptophan synthase alpha chain AW19_1133 PF00291 Pyridoxal-phosphate dependent enzyme AW19_1134 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AW19_1134 PF00218 Indole-3-glycerol phosphate synthase AW19_1135 PF02885 Glycosyl transferase family, helical bundle domain AW19_1135 PF00591 Glycosyl transferase family, a/b domain AW19_1136 PF00117 Glutamine amidotransferase class-I AW19_1137 PF04715 Anthranilate synthase component I, N terminal region AW19_1137 PF00425 chorismate binding enzyme AW19_1138 PF02811 PHP domain AW19_1139 PF01300 Telomere recombination AW19_114 PF03824 High-affinity nickel-transport protein AW19_1140 PF03797 Autotransporter beta-domain AW19_1141 PF00072 Response regulator receiver domain AW19_1141 PF00196 Bacterial regulatory proteins, luxR family AW19_1143 PF09134 Invasin, domain 3 AW19_1143 PF07979 Intimin C-type lectin domain AW19_1143 PF11924 Inverse autotransporter, beta-domain AW19_1143 PF02369 Bacterial Ig-like domain (group 1) AW19_1147 PF00196 Bacterial regulatory proteins, luxR family AW19_115 PF06411 HdeA/HdeB family AW19_1151 PF00239 Resolvase, N terminal domain AW19_1151 PF02796 Helix-turn-helix domain of resolvase AW19_1153 PF00665 Integrase core domain AW19_1154 PF01527 Transposase AW19_1159 PF00849 RNA pseudouridylate synthase AW19_1159 PF01479 S4 domain AW19_116 PF07885 Ion channel AW19_116 PF02254 TrkA-N domain AW19_1161 PF12557 Cob(I)alamin adenosyltransferase N terminal AW19_1161 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AW19_1162 PF00106 short chain dehydrogenase AW19_1163 PF08496 Peptidase family S49 N-terminal AW19_1163 PF01343 Peptidase family S49 AW19_1164 PF10692 Protein of unknown function (DUF2498) AW19_1165 PF01751 Toprim domain AW19_1165 PF01396 Topoisomerase DNA binding C4 zinc finger AW19_1165 PF01131 DNA topoisomerase AW19_1165 PF08272 Topoisomerase I zinc-ribbon-like AW19_1166 PF03466 LysR substrate binding domain AW19_1166 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_1169 PF00694 Aconitase C-terminal domain AW19_1169 PF00330 Aconitase family (aconitate hydratase) AW19_117 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AW19_1170 PF00925 GTP cyclohydrolase II AW19_1171 PF01569 PAP2 superfamily AW19_1172 PF06305 Lipopolysaccharide assembly protein A domain AW19_1173 PF18073 Rubredoxin metal binding domain AW19_1175 PF07338 Protein of unknown function (DUF1471) AW19_1176 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AW19_1177 PF01253 Translation initiation factor SUI1 AW19_1178 PF05433 Glycine zipper 2TM domain AW19_1179 PF00596 Class II Aldolase and Adducin N-terminal domain AW19_118 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AW19_1181 PF08220 DeoR-like helix-turn-helix domain AW19_1181 PF00455 DeoR C terminal sensor domain AW19_1182 PF00923 Transaldolase/Fructose-6-phosphate aldolase AW19_1183 PF04328 Selenoprotein, putative AW19_1184 PF13722 5TM C-terminal transporter carbon starvation CstA AW19_1184 PF02554 Carbon starvation protein CstA AW19_1185 PF08206 Ribonuclease B OB domain AW19_1185 PF00575 S1 RNA binding domain AW19_1185 PF00773 RNB domain AW19_1187 PF00384 Molybdopterin oxidoreductase AW19_119 PF00248 Aldo/keto reductase family AW19_1191 PF00730 HhH-GPD superfamily base excision DNA repair protein AW19_1191 PF10576 Iron-sulfur binding domain of endonuclease III AW19_1191 PF00633 Helix-hairpin-helix motif AW19_1192 PF02508 Rnf-Nqr subunit, membrane protein AW19_1193 PF04205 FMN-binding domain AW19_1194 PF03116 NQR2, RnfD, RnfE family AW19_1195 PF06445 GyrI-like small molecule binding domain AW19_1195 PF12833 Helix-turn-helix domain AW19_1196 PF13237 4Fe-4S dicluster domain AW19_1196 PF13375 RnfC Barrel sandwich hybrid domain AW19_1196 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AW19_1196 PF10531 SLBB domain AW19_1197 PF04060 Putative Fe-S cluster AW19_1198 PF02508 Rnf-Nqr subunit, membrane protein AW19_1199 PF10754 Protein of unknown function (DUF2569) AW19_12 PF03609 PTS system sorbose-specific iic component AW19_120 PF07995 Glucose / Sorbosone dehydrogenase AW19_1200 PF01268 Formate--tetrahydrofolate ligase AW19_1201 PF03412 Peptidase C39 family AW19_1201 PF00005 ABC transporter AW19_1201 PF00664 ABC transporter transmembrane region AW19_1203 PF00664 ABC transporter transmembrane region AW19_1203 PF00005 ABC transporter AW19_1203 PF03412 Peptidase C39 family AW19_1204 PF02463 RecF/RecN/SMC N terminal domain AW19_1205 PF11762 L-arabinose isomerase C-terminal domain AW19_1205 PF02610 L-arabinose isomerase AW19_1206 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AW19_121 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AW19_1210 PF02311 AraC-like ligand binding domain AW19_1210 PF12833 Helix-turn-helix domain AW19_1211 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AW19_1211 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AW19_1212 PF13593 SBF-like CPA transporter family (DUF4137) AW19_1213 PF00962 Adenosine/AMP deaminase AW19_1214 PF00155 Aminotransferase class I and II AW19_1215 PF00367 phosphotransferase system, EIIB AW19_1215 PF02378 Phosphotransferase system, EIIC AW19_1217 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AW19_1217 PF00356 Bacterial regulatory proteins, lacI family AW19_122 PF02378 Phosphotransferase system, EIIC AW19_1220 PF06097 Bacterial protein of unknown function (DUF945) AW19_1221 PF01238 Phosphomannose isomerase type I AW19_1222 PF10415 Fumarase C C-terminus AW19_1222 PF00206 Lyase AW19_1223 PF00196 Bacterial regulatory proteins, luxR family AW19_1224 PF05472 DNA replication terminus site-binding protein (Ter protein) AW19_1226 PF07690 Major Facilitator Superfamily AW19_1227 PF03466 LysR substrate binding domain AW19_1227 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_1228 PF00480 ROK family AW19_123 PF00232 Glycosyl hydrolase family 1 AW19_1230 PF00654 Voltage gated chloride channel AW19_1231 PF06649 Protein of unknown function (DUF1161) AW19_1232 PF06932 Protein of unknown function (DUF1283) AW19_1233 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AW19_1234 PF00106 short chain dehydrogenase AW19_1235 PF13610 DDE domain AW19_1236 PF13610 DDE domain AW19_1237 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AW19_1238 PF00155 Aminotransferase class I and II AW19_1239 PF13610 DDE domain AW19_124 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AW19_1240 PF03960 ArsC family AW19_1241 PF02040 Arsenical pump membrane protein AW19_1242 PF01022 Bacterial regulatory protein, arsR family AW19_1249 PF00501 AMP-binding enzyme AW19_1249 PF14535 AMP-binding enzyme C-terminal domain AW19_125 PF07883 Cupin domain AW19_125 PF12833 Helix-turn-helix domain AW19_1251 PF07690 Major Facilitator Superfamily AW19_1253 PF02798 Glutathione S-transferase, N-terminal domain AW19_1254 PF00158 Sigma-54 interaction domain AW19_1254 PF01590 GAF domain AW19_1255 PF00258 Flavodoxin AW19_1255 PF00753 Metallo-beta-lactamase superfamily AW19_1255 PF00301 Rubredoxin AW19_1256 PF07992 Pyridine nucleotide-disulphide oxidoreductase AW19_1256 PF18113 Rubredoxin binding C-terminal domain AW19_1258 PF01037 Lrp/AsnC ligand binding domain AW19_1259 PF00528 Binding-protein-dependent transport system inner membrane component AW19_126 PF04794 YdjC-like protein AW19_1260 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1261 PF00497 Bacterial extracellular solute-binding proteins, family 3 AW19_1264 PF01048 Phosphorylase superfamily AW19_1264 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AW19_1268 PF01510 N-acetylmuramoyl-L-alanine amidase AW19_127 PF06755 CbtA_toxin of type IV toxin-antitoxin system AW19_1270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AW19_1270 PF00205 Thiamine pyrophosphate enzyme, central domain AW19_1270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AW19_1271 PF01842 ACT domain AW19_1272 PF13419 Haloacid dehalogenase-like hydrolase AW19_1274 PF00245 Alkaline phosphatase AW19_1277 PF03466 LysR substrate binding domain AW19_1277 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_1278 PF06445 GyrI-like small molecule binding domain AW19_128 PF04002 RadC-like JAB domain AW19_1281 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AW19_1281 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AW19_1282 PF13545 Crp-like helix-turn-helix domain AW19_1282 PF00027 Cyclic nucleotide-binding domain AW19_1283 PF00582 Universal stress protein family AW19_1284 PF02233 NAD(P) transhydrogenase beta subunit AW19_1285 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AW19_1285 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AW19_1285 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AW19_1286 PF07338 Protein of unknown function (DUF1471) AW19_1287 PF13520 Amino acid permease AW19_1289 PF00486 Transcriptional regulatory protein, C terminal AW19_1289 PF00072 Response regulator receiver domain AW19_129 PF06067 Domain of unknown function (DUF932) AW19_1290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_1290 PF00672 HAMP domain AW19_1290 PF00512 His Kinase A (phospho-acceptor) domain AW19_1291 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AW19_1294 PF00089 Trypsin AW19_1297 PF11898 Domain of unknown function (DUF3418) AW19_1297 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AW19_1297 PF04408 Helicase associated domain (HA2) AW19_1297 PF00270 DEAD/DEAH box helicase AW19_1297 PF00271 Helicase conserved C-terminal domain AW19_1298 PF02525 Flavodoxin-like fold AW19_1299 PF07027 Protein of unknown function (DUF1318) AW19_13 PF03830 PTS system sorbose subfamily IIB component AW19_1300 PF13617 YnbE-like lipoprotein AW19_1301 PF11739 Dicarboxylate transport AW19_1302 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AW19_1302 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AW19_1303 PF03891 Domain of unknown function (DUF333) AW19_1304 PF02308 MgtC family AW19_1305 PF00893 Small Multidrug Resistance protein AW19_1306 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AW19_1306 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AW19_1306 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AW19_1306 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AW19_1306 PF10371 Domain of unknown function AW19_1307 PF00388 Phosphatidylinositol-specific phospholipase C, X domain AW19_1308 PF01171 PP-loop family AW19_1309 PF01544 CorA-like Mg2+ transporter protein AW19_1311 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AW19_1312 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AW19_1312 PF13378 Enolase C-terminal domain-like AW19_1313 PF00246 Zinc carboxypeptidase AW19_1314 PF08534 Redoxin AW19_1315 PF18024 Helix-turn-helix domain AW19_1315 PF00158 Sigma-54 interaction domain AW19_1318 PF05128 Domain of unknown function (DUF697) AW19_1319 PF04317 YcjX-like family, DUF463 AW19_1321 PF04024 PspC domain AW19_1322 PF06667 Phage shock protein B AW19_1323 PF04012 PspA/IM30 family AW19_1324 PF02954 Bacterial regulatory protein, Fis family AW19_1324 PF00158 Sigma-54 interaction domain AW19_1326 PF02917 Pertussis toxin, subunit 1 AW19_1327 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AW19_1328 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1329 PF12911 N-terminal TM domain of oligopeptide transport permease C AW19_1329 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AW19_1330 PF00005 ABC transporter AW19_1331 PF00005 ABC transporter AW19_1333 PF03466 LysR substrate binding domain AW19_1333 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_1334 PF00854 POT family AW19_1336 PF04893 Yip1 domain AW19_1337 PF11656 YjbD family (DUF3811) AW19_1338 PF02798 Glutathione S-transferase, N-terminal domain AW19_1338 PF00043 Glutathione S-transferase, C-terminal domain AW19_1339 PF08543 Phosphomethylpyrimidine kinase AW19_1340 PF00579 tRNA synthetases class I (W and Y) AW19_1340 PF01479 S4 domain AW19_1341 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AW19_1341 PF01243 Pyridoxamine 5'-phosphate oxidase AW19_1342 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AW19_1343 PF03702 Anhydro-N-acetylmuramic acid kinase AW19_1344 PF05433 Glycine zipper 2TM domain AW19_1345 PF01047 MarR family AW19_1346 PF07869 Protein of unknown function (DUF1656) AW19_1347 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AW19_1347 PF00529 HlyD membrane-fusion protein of T1SS AW19_1348 PF04632 Fusaric acid resistance protein family AW19_1349 PF00248 Aldo/keto reductase family AW19_1351 PF06945 Protein of unknown function (DUF1289) AW19_1353 PF00884 Sulfatase AW19_1353 PF08019 Phosphoethanolamine transferase EptA/EptB AW19_1354 PF00440 Bacterial regulatory proteins, tetR family AW19_1354 PF16925 Tetracyclin repressor-like, C-terminal domain AW19_1355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AW19_1356 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AW19_1357 PF00929 Exonuclease AW19_1358 PF00462 Glutaredoxin AW19_1359 PF00877 NlpC/P60 family AW19_136 PF05930 Prophage CP4-57 regulatory protein (AlpA) AW19_1360 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AW19_1360 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AW19_1362 PF00356 Bacterial regulatory proteins, lacI family AW19_1363 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_1363 PF03466 LysR substrate binding domain AW19_1364 PF07690 Major Facilitator Superfamily AW19_1366 PF00677 Lumazine binding domain AW19_1367 PF01554 MatE AW19_1371 PF00224 Pyruvate kinase, barrel domain AW19_1371 PF02887 Pyruvate kinase, alpha/beta domain AW19_1372 PF04728 Lipoprotein leucine-zipper AW19_1373 PF17969 L,D-transpeptidase C-terminal domain AW19_1373 PF03734 L,D-transpeptidase catalytic domain AW19_1373 PF01476 LysM domain AW19_1374 PF02657 Fe-S metabolism associated domain AW19_1375 PF00266 Aminotransferase class-V AW19_1376 PF01458 Uncharacterized protein family (UPF0051) AW19_1377 PF00005 ABC transporter AW19_1378 PF01458 Uncharacterized protein family (UPF0051) AW19_1379 PF01521 Iron-sulphur cluster biosynthesis AW19_1380 PF03061 Thioesterase superfamily AW19_1381 PF13183 4Fe-4S dicluster domain AW19_1381 PF02913 FAD linked oxidases, C-terminal domain AW19_1381 PF01565 FAD binding domain AW19_1382 PF01594 AI-2E family transporter AW19_1383 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AW19_1383 PF02896 PEP-utilising enzyme, TIM barrel domain AW19_1383 PF00391 PEP-utilising enzyme, mobile domain AW19_1384 PF03618 Kinase/pyrophosphorylase AW19_1385 PF00793 DAHP synthetase I family AW19_1386 PF00593 TonB dependent receptor AW19_1386 PF07715 TonB-dependent Receptor Plug Domain AW19_1387 PF05171 Haemin-degrading HemS.ChuX domain AW19_1388 PF01497 Periplasmic binding protein AW19_1389 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AW19_139 PF13361 UvrD-like helicase C-terminal domain AW19_139 PF12705 PD-(D/E)XK nuclease superfamily AW19_139 PF00580 UvrD/REP helicase N-terminal domain AW19_1390 PF03099 Biotin/lipoate A/B protein ligase family AW19_1390 PF10437 Bacterial lipoate protein ligase C-terminus AW19_1391 PF00877 NlpC/P60 family AW19_1393 PF00892 EamA-like transporter family AW19_1394 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AW19_1395 PF01522 Polysaccharide deacetylase AW19_1396 PF00551 Formyl transferase AW19_1396 PF01370 NAD dependent epimerase/dehydratase family AW19_1396 PF02911 Formyl transferase, C-terminal domain AW19_1397 PF00535 Glycosyl transferase family 2 AW19_1398 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AW19_1399 PF00005 ABC transporter AW19_14 PF03610 PTS system fructose IIA component AW19_140 PF01555 DNA methylase AW19_1400 PF00255 Glutathione peroxidase AW19_1401 PF01032 FecCD transport family AW19_1403 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AW19_1404 PF00216 Bacterial DNA-binding protein AW19_1405 PF03483 B3/4 domain AW19_1405 PF03484 tRNA synthetase B5 domain AW19_1405 PF03147 Ferredoxin-fold anticodon binding domain AW19_1405 PF01588 Putative tRNA binding domain AW19_1405 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AW19_1406 PF01409 tRNA synthetases class II core domain (F) AW19_1406 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AW19_1407 PF00453 Ribosomal protein L20 AW19_1408 PF01632 Ribosomal protein L35 AW19_1409 PF00707 Translation initiation factor IF-3, C-terminal domain AW19_1409 PF05198 Translation initiation factor IF-3, N-terminal domain AW19_1410 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AW19_1410 PF03129 Anticodon binding domain AW19_1410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AW19_1410 PF02824 TGS domain AW19_1412 PF03797 Autotransporter beta-domain AW19_1413 PF00872 Transposase, Mutator family AW19_1414 PF04474 Protein of unknown function (DUF554) AW19_1419 PF01914 MarC family integral membrane protein AW19_1420 PF01464 Transglycosylase SLT domain AW19_1421 PF01297 Zinc-uptake complex component A periplasmic AW19_1422 PF00005 ABC transporter AW19_1423 PF00950 ABC 3 transport family AW19_1424 PF00950 ABC 3 transport family AW19_1426 PF14002 YniB-like protein AW19_1427 PF13419 Haloacid dehalogenase-like hydrolase AW19_1428 PF07883 Cupin domain AW19_1429 PF04962 KduI/IolB family AW19_1431 PF06917 Periplasmic pectate lyase AW19_1432 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1433 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1434 PF00005 ABC transporter AW19_1434 PF17912 MalK OB fold domain AW19_1434 PF03459 TOBE domain AW19_1435 PF01547 Bacterial extracellular solute-binding protein AW19_1436 PF06178 Oligogalacturonate-specific porin protein (KdgM) AW19_1437 PF04307 LexA-binding, inner membrane-associated putative hydrolase AW19_1439 PF01510 N-acetylmuramoyl-L-alanine amidase AW19_144 PF00589 Phage integrase family AW19_144 PF13356 Arm DNA-binding domain AW19_1440 PF09339 IclR helix-turn-helix domain AW19_1440 PF01614 Bacterial transcriptional regulator AW19_1441 PF14583 Oligogalacturonate lyase AW19_1442 PF07690 Major Facilitator Superfamily AW19_1444 PF01435 Peptidase family M48 AW19_1445 PF11818 C-terminal domain of tail specific protease (DUF3340) AW19_1445 PF17804 Tail specific protease N-terminal domain AW19_1445 PF03572 Peptidase family S41 AW19_1445 PF00595 PDZ domain AW19_1446 PF17516 ProQ C-terminal domain AW19_1446 PF04352 ProQ/FINO family AW19_1447 PF13185 GAF domain AW19_1448 PF04403 Paraquat-inducible protein A AW19_1449 PF02470 MlaD protein AW19_145 PF01668 SmpB protein AW19_1450 PF03466 LysR substrate binding domain AW19_1450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_1451 PF07690 Major Facilitator Superfamily AW19_1458 PF00360 Phytochrome region AW19_1458 PF00990 Diguanylate cyclase, GGDEF domain AW19_1458 PF01590 GAF domain AW19_1458 PF00563 EAL domain AW19_1459 PF07351 Protein of unknown function (DUF1480) AW19_146 PF03364 Polyketide cyclase / dehydrase and lipid transport AW19_1466 PF00924 Mechanosensitive ion channel AW19_147 PF03658 RnfH family Ubiquitin AW19_1470 PF01527 Transposase AW19_1471 PF00665 Integrase core domain AW19_1472 PF03616 Sodium/glutamate symporter AW19_1473 PF01479 S4 domain AW19_1473 PF00849 RNA pseudouridylate synthase AW19_1474 PF00144 Beta-lactamase AW19_1476 PF04221 RelB antitoxin AW19_1477 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AW19_148 PF04355 SmpA / OmlA family AW19_1480 PF10709 Protein of unknown function (DUF2511) AW19_1481 PF05425 Copper resistance protein D AW19_1482 PF04234 CopC domain AW19_1483 PF00210 Ferritin-like domain AW19_1484 PF06440 DNA polymerase III, theta subunit AW19_1485 PF00561 alpha/beta hydrolase fold AW19_1487 PF00929 Exonuclease AW19_1488 PF00326 Prolyl oligopeptidase family AW19_1488 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AW19_1489 PF13995 YebF-like protein AW19_149 PF02463 RecF/RecN/SMC N terminal domain AW19_1491 PF07130 YebG protein AW19_1492 PF00270 DEAD/DEAH box helicase AW19_1492 PF00271 Helicase conserved C-terminal domain AW19_1492 PF03880 DbpA RNA binding domain AW19_1493 PF02222 ATP-grasp domain AW19_1494 PF03701 Uncharacterised protein family (UPF0181) AW19_1495 PF04715 Anthranilate synthase component I, N terminal region AW19_1495 PF00425 chorismate binding enzyme AW19_1496 PF00293 NUDIX domain AW19_1497 PF03313 Serine dehydratase alpha chain AW19_1497 PF03315 Serine dehydratase beta chain AW19_1498 PF02048 Heat-stable enterotoxin ST AW19_1499 PF03471 Transporter associated domain AW19_1499 PF03741 Integral membrane protein TerC family AW19_15 PF00106 short chain dehydrogenase AW19_150 PF01513 ATP-NAD kinase AW19_1500 PF03610 PTS system fructose IIA component AW19_1500 PF03830 PTS system sorbose subfamily IIB component AW19_1501 PF03609 PTS system sorbose-specific iic component AW19_1502 PF03613 PTS system mannose/fructose/sorbose family IID component AW19_1503 PF06173 Protein of unknown function (DUF986) AW19_1504 PF02659 Putative manganese efflux pump AW19_1505 PF00593 TonB dependent receptor AW19_1505 PF07715 TonB-dependent Receptor Plug Domain AW19_1506 PF08448 PAS fold AW19_1506 PF13426 PAS domain AW19_1506 PF05231 MASE1 AW19_1506 PF08447 PAS fold AW19_1506 PF00563 EAL domain AW19_1506 PF00990 Diguanylate cyclase, GGDEF domain AW19_1508 PF13847 Methyltransferase domain AW19_1509 PF03717 Penicillin-binding Protein dimerisation domain AW19_1509 PF00905 Penicillin binding protein transpeptidase domain AW19_151 PF01025 GrpE AW19_1511 PF00313 'Cold-shock' DNA-binding domain AW19_1512 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AW19_1513 PF00324 Amino acid permease AW19_1516 PF13974 YebO-like protein AW19_1517 PF13996 YobH-like protein AW19_1518 PF10964 Protein of unknown function (DUF2766) AW19_152 PF03167 Uracil DNA glycosylase superfamily AW19_1520 PF12833 Helix-turn-helix domain AW19_1523 PF13520 Amino acid permease AW19_1525 PF00005 ABC transporter AW19_1525 PF00664 ABC transporter transmembrane region AW19_1527 PF00563 EAL domain AW19_1527 PF00990 Diguanylate cyclase, GGDEF domain AW19_1527 PF00360 Phytochrome region AW19_1527 PF01590 GAF domain AW19_1528 PF06411 HdeA/HdeB family AW19_1529 PF07007 Lysozyme inhibitor LprI AW19_153 PF01228 Glycine radical AW19_1532 PF01638 HxlR-like helix-turn-helix AW19_1533 PF05368 NmrA-like family AW19_1534 PF01053 Cys/Met metabolism PLP-dependent enzyme AW19_1535 PF01965 DJ-1/PfpI family AW19_1535 PF12833 Helix-turn-helix domain AW19_1536 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AW19_1536 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AW19_1537 PF08447 PAS fold AW19_1537 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AW19_154 PF00270 DEAD/DEAH box helicase AW19_154 PF00271 Helicase conserved C-terminal domain AW19_1540 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AW19_1540 PF00356 Bacterial regulatory proteins, lacI family AW19_1544 PF00180 Isocitrate/isopropylmalate dehydrogenase AW19_1545 PF00849 RNA pseudouridylate synthase AW19_1546 PF00293 NUDIX domain AW19_1548 PF04356 Protein of unknown function (DUF489) AW19_1549 PF00206 Lyase AW19_1549 PF08328 Adenylosuccinate lyase C-terminal AW19_155 PF05175 Methyltransferase small domain AW19_1551 PF00072 Response regulator receiver domain AW19_1551 PF00486 Transcriptional regulatory protein, C terminal AW19_1552 PF08918 PhoQ Sensor AW19_1552 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_1553 PF08007 Cupin superfamily protein AW19_1554 PF07687 Peptidase dimerisation domain AW19_1554 PF01546 Peptidase family M20/M25/M40 AW19_1555 PF02146 Sir2 family AW19_1556 PF00480 ROK family AW19_1557 PF12704 MacB-like periplasmic core domain AW19_1557 PF02687 FtsX-like permease family AW19_1558 PF00005 ABC transporter AW19_1559 PF02687 FtsX-like permease family AW19_1559 PF12704 MacB-like periplasmic core domain AW19_156 PF02910 Fumarate reductase flavoprotein C-term AW19_156 PF00890 FAD binding domain AW19_1560 PF00271 Helicase conserved C-terminal domain AW19_1560 PF02559 CarD-like/TRCF domain AW19_1560 PF00270 DEAD/DEAH box helicase AW19_1560 PF03461 TRCF domain AW19_1560 PF17757 UvrB interaction domain AW19_1561 PF05433 Glycine zipper 2TM domain AW19_1563 PF07992 Pyridine nucleotide-disulphide oxidoreductase AW19_1564 PF05728 Uncharacterised protein family (UPF0227) AW19_1565 PF00933 Glycosyl hydrolase family 3 N terminal domain AW19_1566 PF01636 Phosphotransferase enzyme family AW19_1567 PF13036 Peptidoglycan-synthase activator LpoB AW19_1567 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AW19_1568 PF07233 Protein of unknown function (DUF1425) AW19_1569 PF01230 HIT domain AW19_157 PF08281 Sigma-70, region 4 AW19_157 PF04542 Sigma-70 region 2 AW19_1570 PF08501 Shikimate dehydrogenase substrate binding domain AW19_1571 PF12793 Sugar transport-related sRNA regulator N-term AW19_1571 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AW19_1573 PF04055 Radical SAM superfamily AW19_1573 PF13186 Iron-sulfur cluster-binding domain AW19_1575 PF00664 ABC transporter transmembrane region AW19_1575 PF00005 ABC transporter AW19_1575 PF03412 Peptidase C39 family AW19_1577 PF00367 phosphotransferase system, EIIB AW19_1577 PF02378 Phosphotransferase system, EIIC AW19_1578 PF01026 TatD related DNase AW19_1579 PF09115 DNA polymerase III, delta subunit, C terminal AW19_158 PF03873 Anti sigma-E protein RseA, C-terminal domain AW19_158 PF03872 Anti sigma-E protein RseA, N-terminal domain AW19_1580 PF02223 Thymidylate kinase AW19_1581 PF02618 YceG-like family AW19_1582 PF01063 Amino-transferase class IV AW19_1583 PF02801 Beta-ketoacyl synthase, C-terminal domain AW19_1583 PF00109 Beta-ketoacyl synthase, N-terminal domain AW19_1584 PF00550 Phosphopantetheine attachment site AW19_1586 PF00698 Acyl transferase domain AW19_1587 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AW19_1587 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AW19_1588 PF02504 Fatty acid synthesis protein AW19_1589 PF01783 Ribosomal L32p protein family AW19_159 PF17188 MucB/RseB C-terminal domain AW19_159 PF03888 MucB/RseB N-terminal domain AW19_1590 PF02620 Large ribosomal RNA subunit accumulation protein YceD AW19_1591 PF02545 Maf-like protein AW19_1592 PF01479 S4 domain AW19_1592 PF00849 RNA pseudouridylate synthase AW19_1594 PF00575 S1 RNA binding domain AW19_1594 PF12111 Polyribonucleotide phosphorylase C terminal AW19_1594 PF12111 Polyribonucleotide phosphorylase C terminal AW19_1594 PF10150 Ribonuclease E/G family AW19_1594 PF00575 S1 RNA binding domain AW19_1594 PF10150 Ribonuclease E/G family AW19_1595 PF03992 Antibiotic biosynthesis monooxygenase AW19_1596 PF01979 Amidohydrolase family AW19_1597 PF06183 DinI-like family AW19_1598 PF13991 BssS protein family AW19_1599 PF01266 FAD dependent oxidoreductase AW19_16 PF04198 Putative sugar-binding domain AW19_16 PF13936 Helix-turn-helix domain AW19_1600 PF00196 Bacterial regulatory proteins, luxR family AW19_1602 PF01594 AI-2E family transporter AW19_1605 PF03279 Bacterial lipid A biosynthesis acyltransferase AW19_1607 PF07681 DoxX AW19_1608 PF07690 Major Facilitator Superfamily AW19_1609 PF00854 POT family AW19_1612 PF07119 Protein of unknown function (DUF1375) AW19_1613 PF00535 Glycosyl transferase family 2 AW19_1614 PF04349 Periplasmic glucan biosynthesis protein, MdoG AW19_1615 PF01757 Acyltransferase family AW19_1617 PF03471 Transporter associated domain AW19_1617 PF02080 TrkA-C domain AW19_1617 PF00999 Sodium/hydrogen exchanger family AW19_162 PF00679 Elongation factor G C-terminus AW19_162 PF00009 Elongation factor Tu GTP binding domain AW19_162 PF06421 GTP-binding protein LepA C-terminus AW19_162 PF03144 Elongation factor Tu domain 2 AW19_1621 PF03918 Cytochrome C biogenesis protein AW19_1622 PF08534 Redoxin AW19_1623 PF01578 Cytochrome C assembly protein AW19_1623 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AW19_1624 PF03916 Polysulphide reductase, NrfD AW19_1625 PF13247 4Fe-4S dicluster domain AW19_1625 PF00037 4Fe-4S binding domain AW19_1626 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AW19_1626 PF13435 Cytochrome c554 and c-prime AW19_1627 PF02335 Cytochrome c552 AW19_163 PF10502 Signal peptidase, peptidase S26 AW19_1630 PF09618 CRISPR-associated protein (Cas_Csy4) AW19_1631 PF09615 CRISPR-associated protein (Cas_Csy3) AW19_1632 PF09614 CRISPR-associated protein (Cas_Csy2) AW19_1633 PF09611 CRISPR-associated protein (Cas_Csy1) AW19_1636 PF01867 CRISPR associated protein Cas1 AW19_1638 PF04358 DsrC like protein AW19_1639 PF00708 Acylphosphatase AW19_164 PF00035 Double-stranded RNA binding motif AW19_164 PF14622 Ribonuclease-III-like AW19_1641 PF10672 S-adenosylmethionine-dependent methyltransferase AW19_1641 PF17785 PUA-like domain AW19_1642 PF08755 Hemimethylated DNA-binding protein YccV like AW19_1643 PF13380 CoA binding domain AW19_1644 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AW19_1645 PF02142 MGS-like domain AW19_1647 PF13361 UvrD-like helicase C-terminal domain AW19_1647 PF12462 DNA helicase IV / RNA helicase N terminal AW19_1647 PF00580 UvrD/REP helicase N-terminal domain AW19_1648 PF03733 Inner membrane component domain AW19_1649 PF12805 FUSC-like inner membrane protein yccS AW19_165 PF01926 50S ribosome-binding GTPase AW19_165 PF07650 KH domain AW19_1650 PF04994 TfoX C-terminal domain AW19_1650 PF04993 TfoX N-terminal domain AW19_1651 PF03846 Cell division inhibitor SulA AW19_1652 PF01389 OmpA-like transmembrane domain AW19_1652 PF00691 OmpA family AW19_1653 PF06303 MatP N-terminal domain AW19_1653 PF17414 MatP C-terminal ribbon-helix-helix domain AW19_1654 PF13654 AAA domain AW19_1654 PF05362 Lon protease (S16) C-terminal proteolytic domain AW19_1655 PF07977 FabA-like domain AW19_1657 PF00109 Beta-ketoacyl synthase, N-terminal domain AW19_1657 PF02801 Beta-ketoacyl synthase, C-terminal domain AW19_1658 PF04957 Ribosome modulation factor AW19_1659 PF03886 ABC-type transport auxiliary lipoprotein component AW19_166 PF11967 Recombination protein O N terminal AW19_166 PF02565 Recombination protein O C terminal AW19_1660 PF02470 MlaD protein AW19_1661 PF04403 Paraquat-inducible protein A AW19_1662 PF12848 ABC transporter AW19_1662 PF16326 ABC transporter C-terminal domain AW19_1662 PF00005 ABC transporter AW19_1663 PF02926 THUMP domain AW19_1663 PF10672 S-adenosylmethionine-dependent methyltransferase AW19_1663 PF01170 Putative RNA methylase family UPF0020 AW19_1664 PF03476 MOSC N-terminal beta barrel domain AW19_1664 PF03473 MOSC domain AW19_1664 PF00111 2Fe-2S iron-sulfur cluster binding domain AW19_1665 PF07126 Cell-division protein ZapC AW19_1666 PF01180 Dihydroorotate dehydrogenase AW19_1667 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AW19_1667 PF01433 Peptidase family M1 domain AW19_1667 PF11940 Domain of unknown function (DUF3458) Ig-like fold AW19_1668 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AW19_1668 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AW19_1669 PF01336 OB-fold nucleic acid binding domain AW19_1669 PF00152 tRNA synthetases class II (D, K and N) AW19_167 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AW19_1670 PF00267 Gram-negative porin AW19_1671 PF00155 Aminotransferase class I and II AW19_1672 PF00563 EAL domain AW19_1672 PF12792 CSS motif domain associated with EAL AW19_1673 PF00753 Metallo-beta-lactamase superfamily AW19_1674 PF05951 Bacterial protein of unknown function (DUF882) AW19_1675 PF03734 L,D-transpeptidase catalytic domain AW19_1675 PF01471 Putative peptidoglycan binding domain AW19_1676 PF16330 MukB hinge domain AW19_1676 PF04310 MukB N-terminal AW19_1677 PF04288 MukE-like family AW19_1678 PF03882 MukF winged-helix domain AW19_1678 PF17192 MukF middle domain AW19_1678 PF17193 MukF C-terminal domain AW19_168 PF01648 4'-phosphopantetheinyl transferase superfamily AW19_1680 PF02698 DUF218 domain AW19_1681 PF01636 Phosphotransferase enzyme family AW19_1682 PF02348 Cytidylyltransferase AW19_1683 PF03966 Trm112p-like protein AW19_1684 PF00313 'Cold-shock' DNA-binding domain AW19_1685 PF07063 Domain of unknown function (DUF1338) AW19_1686 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AW19_1687 PF00664 ABC transporter transmembrane region AW19_1687 PF00005 ABC transporter AW19_1688 PF00753 Metallo-beta-lactamase superfamily AW19_1688 PF03772 Competence protein AW19_169 PF02447 GntP family permease AW19_1690 PF00216 Bacterial DNA-binding protein AW19_1691 PF00575 S1 RNA binding domain AW19_1692 PF02224 Cytidylate kinase AW19_1693 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AW19_1694 PF00266 Aminotransferase class-V AW19_1695 PF04239 Protein of unknown function (DUF421) AW19_1696 PF17763 Glutaminase/Asparaginase C-terminal domain AW19_1696 PF00710 Asparaginase, N-terminal AW19_1697 PF18381 YcaO cyclodehydratase C-terminal domain AW19_1697 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AW19_1698 PF01226 Formate/nitrite transporter AW19_1699 PF02901 Pyruvate formate lyase-like AW19_1699 PF01228 Glycine radical AW19_170 PF12838 4Fe-4S dicluster domain AW19_1700 PF04055 Radical SAM superfamily AW19_1701 PF07690 Major Facilitator Superfamily AW19_1702 PF02403 Seryl-tRNA synthetase N-terminal domain AW19_1702 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AW19_1703 PF00004 ATPase family associated with various cellular activities (AAA) AW19_1703 PF12002 MgsA AAA+ ATPase C terminal AW19_1703 PF16193 AAA C-terminal domain AW19_1704 PF03548 Outer membrane lipoprotein carrier protein LolA AW19_1705 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AW19_1705 PF17854 FtsK alpha domain AW19_1705 PF01580 FtsK/SpoIIIE family AW19_1705 PF09397 Ftsk gamma domain AW19_1706 PF01037 Lrp/AsnC ligand binding domain AW19_1708 PF07992 Pyridine nucleotide-disulphide oxidoreductase AW19_171 PF01418 Helix-turn-helix domain, rpiR family AW19_171 PF01380 SIS domain AW19_1710 PF00005 ABC transporter AW19_1710 PF00664 ABC transporter transmembrane region AW19_1711 PF00005 ABC transporter AW19_1711 PF00664 ABC transporter transmembrane region AW19_1712 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AW19_1713 PF01176 Translation initiation factor 1A / IF-1 AW19_1714 PF02861 Clp amino terminal domain, pathogenicity island component AW19_1714 PF10431 C-terminal, D2-small domain, of ClpB protein AW19_1714 PF07724 AAA domain (Cdc48 subfamily) AW19_1714 PF17871 AAA lid domain AW19_1714 PF00004 ATPase family associated with various cellular activities (AAA) AW19_1715 PF02617 ATP-dependent Clp protease adaptor protein ClpS AW19_1716 PF00313 'Cold-shock' DNA-binding domain AW19_1717 PF00005 ABC transporter AW19_1717 PF02687 FtsX-like permease family AW19_1717 PF12704 MacB-like periplasmic core domain AW19_1718 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AW19_1719 PF04393 Protein of unknown function (DUF535) AW19_1720 PF11398 Protein of unknown function (DUF2813) AW19_1721 PF03956 Lysine exporter LysO AW19_1722 PF03063 Prismane/CO dehydrogenase family AW19_1723 PF00970 Oxidoreductase FAD-binding domain AW19_1723 PF00111 2Fe-2S iron-sulfur cluster binding domain AW19_1723 PF00175 Oxidoreductase NAD-binding domain AW19_1724 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AW19_1724 PF00205 Thiamine pyrophosphate enzyme, central domain AW19_1724 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AW19_1726 PF01212 Beta-eliminating lyase AW19_1727 PF13460 NAD(P)H-binding AW19_1727 PF11066 Protein of unknown function (DUF2867) AW19_1728 PF01370 NAD dependent epimerase/dehydratase family AW19_1729 PF12883 Protein of unknown function (DUF3828) AW19_173 PF03472 Autoinducer binding domain AW19_173 PF00196 Bacterial regulatory proteins, luxR family AW19_1730 PF00005 ABC transporter AW19_1731 PF00497 Bacterial extracellular solute-binding proteins, family 3 AW19_1732 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1733 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1734 PF00497 Bacterial extracellular solute-binding proteins, family 3 AW19_1735 PF05958 tRNA (Uracil-5-)-methyltransferase AW19_1736 PF10767 Protein of unknown function (DUF2593) AW19_1737 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1738 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1739 PF08402 TOBE domain AW19_1739 PF00005 ABC transporter AW19_174 PF01380 SIS domain AW19_1740 PF13416 Bacterial extracellular solute-binding protein AW19_1741 PF10722 Putative bacterial sensory transduction regulator AW19_1742 PF07214 Protein of unknown function (DUF1418) AW19_1743 PF00462 Glutaredoxin AW19_1744 PF02080 TrkA-C domain AW19_1744 PF06826 Predicted Permease Membrane Region AW19_1746 PF01569 PAP2 superfamily AW19_1747 PF01791 DeoC/LacD family aldolase AW19_1748 PF00455 DeoR C terminal sensor domain AW19_1748 PF08220 DeoR-like helix-turn-helix domain AW19_1750 PF03315 Serine dehydratase beta chain AW19_1750 PF03313 Serine dehydratase alpha chain AW19_1751 PF00768 D-alanyl-D-alanine carboxypeptidase AW19_1751 PF07943 Penicillin-binding protein 5, C-terminal domain AW19_1752 PF00571 CBS domain AW19_1752 PF00291 Pyridoxal-phosphate dependent enzyme AW19_1753 PF01053 Cys/Met metabolism PLP-dependent enzyme AW19_1756 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1757 PF09383 NIL domain AW19_1757 PF00005 ABC transporter AW19_1758 PF03180 NLPA lipoprotein AW19_1762 PF00043 Glutathione S-transferase, C-terminal domain AW19_1762 PF13417 Glutathione S-transferase, N-terminal domain AW19_1763 PF07715 TonB-dependent Receptor Plug Domain AW19_1763 PF00593 TonB dependent receptor AW19_1764 PF01032 FecCD transport family AW19_1765 PF00324 Amino acid permease AW19_1766 PF03466 LysR substrate binding domain AW19_1766 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_177 PF14437 MafB19-like deaminase AW19_1770 PF03601 Conserved hypothetical protein 698 AW19_1771 PF01261 Xylose isomerase-like TIM barrel AW19_1772 PF02378 Phosphotransferase system, EIIC AW19_1772 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AW19_1773 PF00294 pfkB family carbohydrate kinase AW19_1774 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AW19_1774 PF00381 PTS HPr component phosphorylation site AW19_1775 PF13344 Haloacid dehalogenase-like hydrolase AW19_1775 PF00293 NUDIX domain AW19_1776 PF03692 Putative zinc- or iron-chelating domain AW19_1777 PF00384 Molybdopterin oxidoreductase AW19_1777 PF18364 Molybdopterin oxidoreductase N-terminal domain AW19_1777 PF01568 Molydopterin dinucleotide binding domain AW19_1778 PF03222 Tryptophan/tyrosine permease family AW19_1779 PF09285 Elongation factor P, C-terminal AW19_1779 PF08207 Elongation factor P (EF-P) KOW-like domain AW19_1779 PF01132 Elongation factor P (EF-P) OB domain AW19_178 PF00497 Bacterial extracellular solute-binding proteins, family 3 AW19_178 PF01464 Transglycosylase SLT domain AW19_1780 PF03786 D-mannonate dehydratase (UxuA) AW19_1781 PF08125 Mannitol dehydrogenase C-terminal domain AW19_1781 PF01232 Mannitol dehydrogenase Rossmann domain AW19_1782 PF07729 FCD domain AW19_1782 PF00392 Bacterial regulatory proteins, gntR family AW19_1784 PF02492 CobW/HypB/UreG, nucleotide-binding domain AW19_1784 PF07683 Cobalamin synthesis protein cobW C-terminal domain AW19_1785 PF00877 NlpC/P60 family AW19_1786 PF00563 EAL domain AW19_1786 PF12792 CSS motif domain associated with EAL AW19_1787 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AW19_1788 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1789 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1789 PF12911 N-terminal TM domain of oligopeptide transport permease C AW19_179 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AW19_179 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AW19_179 PF02769 AIR synthase related protein, C-terminal domain AW19_1790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AW19_1790 PF00005 ABC transporter AW19_1791 PF13989 YejG-like protein AW19_1792 PF07690 Major Facilitator Superfamily AW19_1793 PF01479 S4 domain AW19_1793 PF00849 RNA pseudouridylate synthase AW19_1794 PF00271 Helicase conserved C-terminal domain AW19_1794 PF04851 Type III restriction enzyme, res subunit AW19_1795 PF01386 Ribosomal L25p family AW19_1796 PF04245 37-kD nucleoid-associated bacterial protein AW19_1797 PF07208 Protein of unknown function (DUF1414) AW19_1798 PF00884 Sulfatase AW19_1798 PF11893 Domain of unknown function (DUF3413) AW19_1800 PF00232 Glycosyl hydrolase family 1 AW19_1801 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AW19_1801 PF00367 phosphotransferase system, EIIB AW19_1801 PF02378 Phosphotransferase system, EIIC AW19_1802 PF01418 Helix-turn-helix domain, rpiR family AW19_1802 PF01380 SIS domain AW19_1804 PF06183 DinI-like family AW19_1805 PF01278 Omptin family AW19_1806 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AW19_1806 PF02743 Cache domain AW19_1806 PF00672 HAMP domain AW19_1807 PF12706 Beta-lactamase superfamily domain AW19_1809 PF00144 Beta-lactamase AW19_181 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_181 PF00512 His Kinase A (phospho-acceptor) domain AW19_1812 PF00267 Gram-negative porin AW19_1813 PF00529 HlyD membrane-fusion protein of T1SS AW19_1814 PF00005 ABC transporter AW19_1814 PF00664 ABC transporter transmembrane region AW19_1817 PF07690 Major Facilitator Superfamily AW19_1818 PF01627 Hpt domain AW19_1818 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_1818 PF16359 RcsD-ABL domain AW19_1819 PF00196 Bacterial regulatory proteins, luxR family AW19_1819 PF00072 Response regulator receiver domain AW19_182 PF13942 YfhG lipoprotein AW19_1820 PF00072 Response regulator receiver domain AW19_1820 PF09456 RcsC Alpha-Beta-Loop (ABL) AW19_1820 PF00512 His Kinase A (phospho-acceptor) domain AW19_1820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_1821 PF00521 DNA gyrase/topoisomerase IV, subunit A AW19_1821 PF03989 DNA gyrase C-terminal domain, beta-propeller AW19_1823 PF00317 Ribonucleotide reductase, all-alpha domain AW19_1823 PF02867 Ribonucleotide reductase, barrel domain AW19_1823 PF03477 ATP cone domain AW19_1824 PF00268 Ribonucleotide reductase, small chain AW19_1825 PF00111 2Fe-2S iron-sulfur cluster binding domain AW19_1826 PF03974 Ecotin AW19_1827 PF00994 Probable molybdopterin binding domain AW19_1828 PF03222 Tryptophan/tyrosine permease family AW19_1829 PF07437 YfaZ precursor AW19_183 PF00072 Response regulator receiver domain AW19_183 PF00158 Sigma-54 interaction domain AW19_1830 PF06628 Catalase-related immune-responsive AW19_1830 PF00199 Catalase AW19_1831 PF13193 AMP-binding enzyme C-terminal domain AW19_1831 PF00501 AMP-binding enzyme AW19_1832 PF13378 Enolase C-terminal domain-like AW19_1833 PF00378 Enoyl-CoA hydratase/isomerase AW19_1834 PF12697 Alpha/beta hydrolase family AW19_1835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AW19_1835 PF16582 Middle domain of thiamine pyrophosphate AW19_1835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AW19_1836 PF00425 chorismate binding enzyme AW19_1838 PF05957 Bacterial protein of unknown function (DUF883) AW19_1839 PF00920 Dehydratase family AW19_184 PF00795 Carbon-nitrogen hydrolase AW19_184 PF02540 NAD synthase AW19_1840 PF03928 Haem-degrading AW19_1841 PF07690 Major Facilitator Superfamily AW19_1842 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AW19_1842 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AW19_1843 PF00356 Bacterial regulatory proteins, lacI family AW19_1844 PF00106 short chain dehydrogenase AW19_1845 PF01202 Shikimate kinase AW19_1846 PF04074 YhcH/YjgK/YiaL AW19_1847 PF06496 Protein of unknown function (DUF1097) AW19_1849 PF00361 Proton-conducting membrane transporter AW19_185 PF00543 Nitrogen regulatory protein P-II AW19_1850 PF00361 Proton-conducting membrane transporter AW19_1851 PF00361 Proton-conducting membrane transporter AW19_1851 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AW19_1852 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AW19_1853 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AW19_1854 PF12838 4Fe-4S dicluster domain AW19_1855 PF00146 NADH dehydrogenase AW19_1856 PF01568 Molydopterin dinucleotide binding domain AW19_1856 PF00384 Molybdopterin oxidoreductase AW19_1856 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AW19_1856 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AW19_1857 PF10531 SLBB domain AW19_1857 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AW19_1857 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AW19_1859 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AW19_1859 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AW19_1860 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AW19_1861 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AW19_1862 PF03466 LysR substrate binding domain AW19_1862 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_1863 PF00155 Aminotransferase class I and II AW19_1866 PF03600 Citrate transporter AW19_1866 PF02080 TrkA-C domain AW19_1868 PF13419 Haloacid dehalogenase-like hydrolase AW19_1869 PF03887 YfbU domain AW19_187 PF14503 YhfZ C-terminal domain AW19_187 PF14502 Helix-turn-helix domain AW19_1870 PF04217 Protein of unknown function, DUF412 AW19_1871 PF00871 Acetokinase family AW19_1872 PF07085 DRTGG domain AW19_1872 PF01515 Phosphate acetyl/butaryl transferase AW19_1873 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AW19_1873 PF00356 Bacterial regulatory proteins, lacI family AW19_1874 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AW19_1876 PF03611 PTS system sugar-specific permease component AW19_1877 PF00293 NUDIX domain AW19_1878 PF12850 Calcineurin-like phosphoesterase superfamily domain AW19_188 PF00970 Oxidoreductase FAD-binding domain AW19_188 PF00175 Oxidoreductase NAD-binding domain AW19_188 PF00042 Globin AW19_1880 PF01370 NAD dependent epimerase/dehydratase family AW19_1880 PF08338 Domain of unknown function (DUF1731) AW19_1881 PF00005 ABC transporter AW19_1882 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1883 PF00528 Binding-protein-dependent transport system inner membrane component AW19_1884 PF00497 Bacterial extracellular solute-binding proteins, family 3 AW19_1885 PF02441 Flavoprotein AW19_1886 PF00156 Phosphoribosyl transferase domain AW19_1887 PF02674 Colicin V production protein AW19_1888 PF05036 Sporulation related domain AW19_189 PF00464 Serine hydroxymethyltransferase AW19_1890 PF02875 Mur ligase family, glutamate ligase domain AW19_1890 PF08245 Mur ligase middle domain AW19_1892 PF01039 Carboxyl transferase domain AW19_1892 PF17848 Acetyl-coA carboxylase zinc finger domain AW19_1893 PF09335 SNARE associated Golgi protein AW19_1895 PF01416 tRNA pseudouridine synthase AW19_1896 PF02774 Semialdehyde dehydrogenase, dimerisation domain AW19_1896 PF01118 Semialdehyde dehydrogenase, NAD binding domain AW19_1897 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AW19_1897 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AW19_1897 PF11890 Domain of unknown function (DUF3410) AW19_1898 PF12833 Helix-turn-helix domain AW19_1899 PF00892 EamA-like transporter family AW19_190 PF00874 PRD domain AW19_1901 PF00155 Aminotransferase class I and II AW19_1902 PF00578 AhpC/TSA family AW19_1904 PF11412 Disulphide bond corrector protein DsbC AW19_1904 PF02683 Cytochrome C biogenesis protein transmembrane region AW19_1906 PF03600 Citrate transporter AW19_1907 PF00328 Histidine phosphatase superfamily (branch 2) AW19_1908 PF00356 Bacterial regulatory proteins, lacI family AW19_1909 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AW19_191 PF12832 MFS_1 like family AW19_1910 PF02378 Phosphotransferase system, EIIC AW19_1911 PF00232 Glycosyl hydrolase family 1 AW19_1912 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AW19_1914 PF01177 Asp/Glu/Hydantoin racemase AW19_1915 PF00990 Diguanylate cyclase, GGDEF domain AW19_1916 PF02801 Beta-ketoacyl synthase, C-terminal domain AW19_1916 PF00109 Beta-ketoacyl synthase, N-terminal domain AW19_1917 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AW19_1917 PF01266 FAD dependent oxidoreductase AW19_1918 PF08891 YfcL protein AW19_1919 PF04315 Elongation factor P hydroxylase AW19_192 PF06226 Protein of unknown function (DUF1007) AW19_1920 PF01925 Sulfite exporter TauE/SafE AW19_1921 PF03411 Penicillin-insensitive murein endopeptidase AW19_1922 PF01264 Chorismate synthase AW19_1923 PF05175 Methyltransferase small domain AW19_1924 PF01713 Smr domain AW19_1925 PF00300 Histidine phosphatase superfamily (branch 1) AW19_1926 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AW19_1926 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AW19_1926 PF00378 Enoyl-CoA hydratase/isomerase AW19_1927 PF02803 Thiolase, C-terminal domain AW19_1927 PF00108 Thiolase, N-terminal domain AW19_1928 PF04175 Protein of unknown function (DUF406) AW19_1929 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AW19_193 PF03824 High-affinity nickel-transport protein AW19_1930 PF04333 MlaA lipoprotein AW19_1931 PF03918 Cytochrome C biogenesis protein AW19_1932 PF03918 Cytochrome C biogenesis protein AW19_1933 PF08534 Redoxin AW19_1934 PF01578 Cytochrome C assembly protein AW19_1934 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AW19_1935 PF03100 CcmE AW19_1936 PF04995 Heme exporter protein D (CcmD) AW19_1937 PF01578 Cytochrome C assembly protein AW19_1938 PF03379 CcmB protein AW19_1939 PF00005 ABC transporter AW19_194 PF00459 Inositol monophosphatase family AW19_1940 PF01226 Formate/nitrite transporter AW19_1942 PF13356 Arm DNA-binding domain AW19_1942 PF14659 Phage integrase, N-terminal SAM-like domain AW19_1942 PF00589 Phage integrase family AW19_195 PF00588 SpoU rRNA Methylase family AW19_196 PF02082 Transcriptional regulator AW19_197 PF00266 Aminotransferase class-V AW19_1974 PF03592 Terminase small subunit AW19_1979 PF00959 Phage lysozyme AW19_198 PF01592 NifU-like N terminal domain AW19_1983 PF05866 Endodeoxyribonuclease RusA AW19_1984 PF07102 Protein of unknown function (DUF1364) AW19_199 PF01521 Iron-sulphur cluster biosynthesis AW19_1992 PF00772 DnaB-like helicase N terminal domain AW19_1992 PF03796 DnaB-like helicase C terminal domain AW19_2009 PF03837 RecT family AW19_201 PF00226 DnaJ domain AW19_201 PF07743 HSCB C-terminal oligomerisation domain AW19_202 PF00012 Hsp70 protein AW19_2021 PF00589 Phage integrase family AW19_2023 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AW19_2023 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AW19_2025 PF01406 tRNA synthetases class I (C) catalytic domain AW19_2025 PF09190 DALR domain AW19_2026 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AW19_2027 PF00149 Calcineurin-like phosphoesterase AW19_2028 PF00731 AIR carboxylase AW19_2029 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AW19_2029 PF02222 ATP-grasp domain AW19_203 PF00111 2Fe-2S iron-sulfur cluster binding domain AW19_2031 PF00005 ABC transporter AW19_2032 PF13472 GDSL-like Lipase/Acylhydrolase family AW19_2033 PF00106 short chain dehydrogenase AW19_2034 PF00085 Thioredoxin AW19_2035 PF16200 C-terminal region of band_7 AW19_2035 PF01145 SPFH domain / Band 7 family AW19_2036 PF01957 NfeD-like C-terminal, partner-binding AW19_2037 PF13411 MerR HTH family regulatory protein AW19_2038 PF00403 Heavy-metal-associated domain AW19_2039 PF01963 TraB family AW19_204 PF04384 Iron-sulphur cluster assembly AW19_2040 PF04073 Aminoacyl-tRNA editing domain AW19_2041 PF02872 5'-nucleotidase, C-terminal domain AW19_2041 PF00149 Calcineurin-like phosphoesterase AW19_2042 PF07690 Major Facilitator Superfamily AW19_2043 PF00999 Sodium/hydrogen exchanger family AW19_2043 PF02254 TrkA-N domain AW19_2044 PF00294 pfkB family carbohydrate kinase AW19_2045 PF16363 GDP-mannose 4,6 dehydratase AW19_2046 PF00534 Glycosyl transferases group 1 AW19_2046 PF13439 Glycosyltransferase Family 4 AW19_2047 PF02719 Polysaccharide biosynthesis protein AW19_2048 PF00953 Glycosyl transferase family 4 AW19_2049 PF13439 Glycosyltransferase Family 4 AW19_2049 PF00534 Glycosyl transferases group 1 AW19_205 PF12404 Peptidase AW19_205 PF00883 Cytosol aminopeptidase family, catalytic domain AW19_2050 PF13439 Glycosyltransferase Family 4 AW19_2050 PF00534 Glycosyl transferases group 1 AW19_2051 PF00535 Glycosyl transferase family 2 AW19_2052 PF01501 Glycosyl transferase family 8 AW19_2052 PF00535 Glycosyl transferase family 2 AW19_2053 PF01943 Polysaccharide biosynthesis protein AW19_2054 PF00762 Ferrochelatase AW19_2055 PF05191 Adenylate kinase, active site lid AW19_2056 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_2056 PF00183 Hsp90 protein AW19_2057 PF02132 RecR protein AW19_2057 PF13662 Toprim domain AW19_2058 PF02575 YbaB/EbfC DNA-binding family AW19_2059 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AW19_2059 PF12169 DNA polymerase III subunits gamma and tau domain III AW19_2059 PF12170 DNA polymerase III tau subunit V interacting with alpha AW19_206 PF07179 SseB protein N-terminal domain AW19_206 PF14581 SseB protein C-terminal domain AW19_2060 PF00156 Phosphoribosyl transferase domain AW19_2061 PF04304 Protein of unknown function (DUF454) AW19_2063 PF12795 Mechanosensitive ion channel porin domain AW19_2063 PF00924 Mechanosensitive ion channel AW19_2063 PF12794 Mechanosensitive ion channel inner membrane domain 1 AW19_2064 PF02635 DsrE/DsrF-like family AW19_2065 PF00440 Bacterial regulatory proteins, tetR family AW19_2065 PF08361 MAATS-type transcriptional repressor, C-terminal region AW19_2066 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AW19_2066 PF00529 HlyD membrane-fusion protein of T1SS AW19_2067 PF00873 AcrB/AcrD/AcrF family AW19_2069 PF01168 Alanine racemase, N-terminal domain AW19_207 PF03797 Autotransporter beta-domain AW19_207 PF16168 Adhesin of bacterial autotransporter system, probable stalk AW19_207 PF03212 Pertactin AW19_2070 PF01676 Metalloenzyme superfamily AW19_2071 PF10941 Protein of unknown function DUF2620 AW19_2073 PF01197 Ribosomal protein L31 AW19_2074 PF00444 Ribosomal protein L36 AW19_2075 PF01297 Zinc-uptake complex component A periplasmic AW19_2076 PF00950 ABC 3 transport family AW19_2077 PF00005 ABC transporter AW19_2079 PF10757 Biofilm formation regulator YbaJ AW19_208 PF01835 MG2 domain AW19_208 PF17962 Bacterial macroglobulin domain 6 AW19_208 PF07678 A-macroglobulin TED domain AW19_208 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AW19_208 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AW19_208 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AW19_208 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AW19_208 PF07703 Alpha-2-macroglobulin bait region domain AW19_208 PF00207 Alpha-2-macroglobulin family AW19_2080 PF05321 Haemolysin expression modulating protein AW19_2081 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AW19_2082 PF09619 Type III secretion system lipoprotein chaperone (YscW) AW19_2084 PF00909 Ammonium Transporter Family AW19_2085 PF00543 Nitrogen regulatory protein P-II AW19_2086 PF00664 ABC transporter transmembrane region AW19_2086 PF00005 ABC transporter AW19_2087 PF00664 ABC transporter transmembrane region AW19_2087 PF00005 ABC transporter AW19_2088 PF01037 Lrp/AsnC ligand binding domain AW19_2088 PF13404 AsnC-type helix-turn-helix domain AW19_209 PF00912 Transglycosylase AW19_209 PF06832 Penicillin-Binding Protein C-terminus Family AW19_209 PF00905 Penicillin binding protein transpeptidase domain AW19_2091 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AW19_2091 PF12793 Sugar transport-related sRNA regulator N-term AW19_2092 PF06508 Queuosine biosynthesis protein QueC AW19_2095 PF13145 PPIC-type PPIASE domain AW19_2097 PF00216 Bacterial DNA-binding protein AW19_2098 PF02190 ATP-dependent protease La (LON) substrate-binding domain AW19_2098 PF05362 Lon protease (S16) C-terminal proteolytic domain AW19_2098 PF00004 ATPase family associated with various cellular activities (AAA) AW19_2099 PF10431 C-terminal, D2-small domain, of ClpB protein AW19_2099 PF07724 AAA domain (Cdc48 subfamily) AW19_2099 PF06689 ClpX C4-type zinc finger AW19_21 PF00005 ABC transporter AW19_2100 PF00574 Clp protease AW19_2101 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AW19_2101 PF05698 Bacterial trigger factor protein (TF) C-terminus AW19_2101 PF05697 Bacterial trigger factor protein (TF) AW19_2102 PF01722 BolA-like protein AW19_2103 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AW19_2103 PF03923 Uncharacterized lipoprotein AW19_2104 PF07690 Major Facilitator Superfamily AW19_2105 PF03502 Nucleoside-specific channel-forming protein, Tsx AW19_2106 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AW19_2106 PF06481 COX Aromatic Rich Motif AW19_2107 PF00115 Cytochrome C and Quinol oxidase polypeptide I AW19_2108 PF00510 Cytochrome c oxidase subunit III AW19_2109 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AW19_211 PF00334 Nucleoside diphosphate kinase AW19_2110 PF01040 UbiA prenyltransferase family AW19_2111 PF07690 Major Facilitator Superfamily AW19_2112 PF04461 Protein of unknown function (DUF520) AW19_2113 PF08546 Ketopantoate reductase PanE/ApbA C terminal AW19_2113 PF02558 Ketopantoate reductase PanE/ApbA AW19_2114 PF01965 DJ-1/PfpI family AW19_2115 PF02926 THUMP domain AW19_2115 PF02568 Thiamine biosynthesis protein (ThiI) AW19_2116 PF02609 Exonuclease VII small subunit AW19_2117 PF00348 Polyprenyl synthetase AW19_2118 PF02779 Transketolase, pyrimidine binding domain AW19_2118 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AW19_2118 PF02780 Transketolase, C-terminal domain AW19_2119 PF04608 Phosphatidylglycerophosphatase A AW19_212 PF04055 Radical SAM superfamily AW19_2120 PF02769 AIR synthase related protein, C-terminal domain AW19_2120 PF00586 AIR synthase related protein, N-terminal domain AW19_2121 PF01029 NusB family AW19_2122 PF00885 6,7-dimethyl-8-ribityllumazine synthase AW19_2123 PF01872 RibD C-terminal domain AW19_2123 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AW19_2124 PF03477 ATP cone domain AW19_2126 PF02355 Protein export membrane protein AW19_2126 PF07549 SecD/SecF GG Motif AW19_2127 PF07549 SecD/SecF GG Motif AW19_2127 PF13721 SecD export protein N-terminal TM region AW19_2127 PF02355 Protein export membrane protein AW19_2128 PF02699 Preprotein translocase subunit AW19_2129 PF01702 Queuine tRNA-ribosyltransferase AW19_2132 PF13018 Extended Signal Peptide of Type V secretion system AW19_2132 PF16168 Adhesin of bacterial autotransporter system, probable stalk AW19_2132 PF03797 Autotransporter beta-domain AW19_2133 PF02547 Queuosine biosynthesis protein AW19_2134 PF04336 Acyl carrier protein phosphodiesterase AW19_2135 PF10417 C-terminal domain of 1-Cys peroxiredoxin AW19_2135 PF00578 AhpC/TSA family AW19_2138 PF00128 Alpha amylase, catalytic domain AW19_2138 PF02903 Alpha amylase, N-terminal ig-like domain AW19_2139 PF00324 Amino acid permease AW19_214 PF13464 Domain of unknown function (DUF4115) AW19_2140 PF05525 Branched-chain amino acid transport protein AW19_2141 PF12849 PBP superfamily domain AW19_2142 PF11808 Phosphate regulon sensor protein PhoR AW19_2142 PF00989 PAS fold AW19_2142 PF00512 His Kinase A (phospho-acceptor) domain AW19_2142 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_2143 PF00486 Transcriptional regulatory protein, C terminal AW19_2143 PF00072 Response regulator receiver domain AW19_2145 PF00149 Calcineurin-like phosphoesterase AW19_2145 PF12320 Type 5 capsule protein repressor C-terminal domain AW19_2146 PF13476 AAA domain AW19_2147 PF00480 ROK family AW19_2148 PF04381 Putative exonuclease, RdgC AW19_2149 PF06865 Pyrimidine/purine nucleoside phosphorylase AW19_215 PF04551 GcpE protein AW19_2150 PF01202 Shikimate kinase AW19_2157 PF08241 Methyltransferase domain AW19_216 PF03129 Anticodon binding domain AW19_216 PF13393 Histidyl-tRNA synthetase AW19_2160 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AW19_2160 PF06165 Glycosyltransferase family 36 AW19_2160 PF10091 Putative glucoamylase AW19_2161 PF07238 PilZ domain AW19_2161 PF07317 Flagellar regulator YcgR AW19_2162 PF02056 Family 4 glycosyl hydrolase AW19_2162 PF11975 Family 4 glycosyl hydrolase C-terminal domain AW19_2163 PF02378 Phosphotransferase system, EIIC AW19_2163 PF00367 phosphotransferase system, EIIB AW19_2164 PF07702 UTRA domain AW19_2164 PF00392 Bacterial regulatory proteins, gntR family AW19_2165 PF07662 Na+ dependent nucleoside transporter C-terminus AW19_2165 PF01773 Na+ dependent nucleoside transporter N-terminus AW19_2166 PF04227 Indigoidine synthase A like protein AW19_2167 PF00294 pfkB family carbohydrate kinase AW19_2168 PF00171 Aldehyde dehydrogenase family AW19_217 PF09976 Tetratricopeptide repeat-like domain AW19_2170 PF00696 Amino acid kinase family AW19_2170 PF01472 PUA domain AW19_2171 PF07417 Sigma factor-binding transcriptional regulator Crl AW19_2173 PF00156 Phosphoribosyl transferase domain AW19_2175 PF01467 Cytidylyltransferase-like AW19_2176 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AW19_2177 PF00534 Glycosyl transferases group 1 AW19_2178 PF00534 Glycosyl transferases group 1 AW19_2178 PF13439 Glycosyltransferase Family 4 AW19_218 PF13360 PQQ-like domain AW19_2183 PF08485 Polysaccharide biosynthesis protein C-terminal AW19_2183 PF02719 Polysaccharide biosynthesis protein AW19_2184 PF01370 NAD dependent epimerase/dehydratase family AW19_2185 PF02350 UDP-N-acetylglucosamine 2-epimerase AW19_2187 PF02706 Chain length determinant protein AW19_2188 PF01546 Peptidase family M20/M25/M40 AW19_2188 PF07687 Peptidase dimerisation domain AW19_2189 PF00817 impB/mucB/samB family AW19_2189 PF11799 impB/mucB/samB family C-terminal domain AW19_2189 PF11798 IMS family HHH motif AW19_219 PF01926 50S ribosome-binding GTPase AW19_219 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AW19_2191 PF00291 Pyridoxal-phosphate dependent enzyme AW19_2192 PF13309 HTH domain AW19_2192 PF08348 YheO-like PAS domain AW19_2193 PF01820 D-ala D-ala ligase N-terminus AW19_2193 PF07478 D-ala D-ala ligase C-terminus AW19_2195 PF03009 Glycerophosphoryl diester phosphodiesterase family AW19_2196 PF04400 (Na+)-NQR maturation NqrM AW19_2197 PF02424 ApbE family AW19_2198 PF00970 Oxidoreductase FAD-binding domain AW19_2198 PF00111 2Fe-2S iron-sulfur cluster binding domain AW19_2198 PF00175 Oxidoreductase NAD-binding domain AW19_2199 PF02508 Rnf-Nqr subunit, membrane protein AW19_22 PF00005 ABC transporter AW19_2200 PF02508 Rnf-Nqr subunit, membrane protein AW19_2201 PF04205 FMN-binding domain AW19_2202 PF03116 NQR2, RnfD, RnfE family AW19_2203 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AW19_2203 PF11973 NQRA C-terminal domain AW19_2204 PF13230 Glutamine amidotransferases class-II AW19_2205 PF03734 L,D-transpeptidase catalytic domain AW19_2206 PF13580 SIS domain AW19_2207 PF09317 Domain of unknown function (DUF1974) AW19_2207 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AW19_2207 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AW19_2208 PF01636 Phosphotransferase enzyme family AW19_2209 PF01008 Initiation factor 2 subunit family AW19_221 PF07191 zinc-ribbons AW19_2210 PF03079 ARD/ARD' family AW19_2212 PF00596 Class II Aldolase and Adducin N-terminal domain AW19_2213 PF00155 Aminotransferase class I and II AW19_2214 PF00795 Carbon-nitrogen hydrolase AW19_2215 PF07690 Major Facilitator Superfamily AW19_2216 PF03591 AzlC protein AW19_2217 PF05437 Branched-chain amino acid transport protein (AzlD) AW19_2218 PF01047 MarR family AW19_2219 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AW19_2219 PF00529 HlyD membrane-fusion protein of T1SS AW19_222 PF02601 Exonuclease VII, large subunit AW19_222 PF13742 OB-fold nucleic acid binding domain AW19_2220 PF07690 Major Facilitator Superfamily AW19_2221 PF00588 SpoU rRNA Methylase family AW19_2221 PF08032 RNA 2'-O ribose methyltransferase substrate binding AW19_2222 PF00085 Thioredoxin AW19_2224 PF00583 Acetyltransferase (GNAT) family AW19_2224 PF13380 CoA binding domain AW19_2224 PF13607 Succinyl-CoA ligase like flavodoxin domain AW19_2225 PF13091 PLD-like domain AW19_2226 PF10043 Predicted periplasmic lipoprotein (DUF2279) AW19_223 PF00478 IMP dehydrogenase / GMP reductase domain AW19_223 PF00571 CBS domain AW19_2233 PF00005 ABC transporter AW19_2233 PF09383 NIL domain AW19_2234 PF00528 Binding-protein-dependent transport system inner membrane component AW19_2235 PF03180 NLPA lipoprotein AW19_2236 PF16358 RcsF lipoprotein AW19_2237 PF18389 TrmO C-terminal domain AW19_2237 PF01980 tRNA-methyltransferase O AW19_2238 PF04073 Aminoacyl-tRNA editing domain AW19_2238 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AW19_2238 PF03129 Anticodon binding domain AW19_2239 PF17185 NlpE C-terminal OB domain AW19_2239 PF04170 NlpE N-terminal domain AW19_224 PF02540 NAD synthase AW19_224 PF00958 GMP synthase C terminal domain AW19_224 PF00117 Glutamine amidotransferase class-I AW19_2240 PF00472 RF-1 domain AW19_2241 PF07152 YaeQ protein AW19_2242 PF06786 Uncharacterised protein family (UPF0253) AW19_2243 PF07073 Modulator of Rho-dependent transcription termination (ROF) AW19_2244 PF00034 Cytochrome c AW19_2245 PF01171 PP-loop family AW19_2245 PF11734 TilS substrate C-terminal domain AW19_2245 PF09179 TilS substrate binding domain AW19_2246 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AW19_225 PF14659 Phage integrase, N-terminal SAM-like domain AW19_225 PF00589 Phage integrase family AW19_225 PF13356 Arm DNA-binding domain AW19_2250 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AW19_2251 PF02811 PHP domain AW19_2251 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AW19_2251 PF07733 Bacterial DNA polymerase III alpha NTPase domain AW19_2251 PF14579 Helix-hairpin-helix motif AW19_2251 PF01336 OB-fold nucleic acid binding domain AW19_2252 PF01351 Ribonuclease HII AW19_2253 PF02684 Lipid-A-disaccharide synthetase AW19_2254 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AW19_2254 PF00132 Bacterial transferase hexapeptide (six repeats) AW19_2255 PF07977 FabA-like domain AW19_2256 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AW19_2256 PF00132 Bacterial transferase hexapeptide (six repeats) AW19_2257 PF03938 Outer membrane protein (OmpH-like) AW19_2258 PF07244 Surface antigen variable number repeat AW19_2258 PF01103 Surface antigen AW19_2259 PF17820 PDZ domain AW19_2259 PF02163 Peptidase family M50 AW19_2261 PF01255 Putative undecaprenyl diphosphate synthase AW19_2262 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AW19_2262 PF13288 DXP reductoisomerase C-terminal domain AW19_2262 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AW19_2263 PF01765 Ribosome recycling factor AW19_2264 PF00696 Amino acid kinase family AW19_2265 PF00889 Elongation factor TS AW19_2266 PF00318 Ribosomal protein S2 AW19_2267 PF00557 Metallopeptidase family M24 AW19_2268 PF01966 HD domain AW19_2268 PF08335 GlnD PII-uridylyltransferase AW19_2268 PF01909 Nucleotidyltransferase domain AW19_2268 PF01842 ACT domain AW19_2269 PF00132 Bacterial transferase hexapeptide (six repeats) AW19_2269 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AW19_2269 PF14602 Hexapeptide repeat of succinyl-transferase AW19_227 PF05063 MT-A70 AW19_2270 PF11944 Protein of unknown function (DUF3461) AW19_2271 PF00258 Flavodoxin AW19_2272 PF00849 RNA pseudouridylate synthase AW19_2273 PF04287 tRNA pseudouridine synthase C AW19_2274 PF07348 Syd protein (SUKH-2) AW19_2275 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AW19_2275 PF14489 QueF-like protein AW19_2276 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AW19_2276 PF11892 Domain of unknown function (DUF3412) AW19_2276 PF03641 Possible lysine decarboxylase AW19_2277 PF01367 5'-3' exonuclease, C-terminal SAM fold AW19_2277 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AW19_2278 PF18125 RlmM ferredoxin-like domain AW19_2278 PF01728 FtsJ-like methyltransferase AW19_2279 PF04241 Protein of unknown function (DUF423) AW19_2280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_2280 PF03466 LysR substrate binding domain AW19_2281 PF06004 Bacterial protein of unknown function (DUF903) AW19_2282 PF00266 Aminotransferase class-V AW19_2283 PF00899 ThiF family AW19_2284 PF02657 Fe-S metabolism associated domain AW19_2285 PF03562 MltA specific insert domain AW19_2285 PF06725 3D domain AW19_2289 PF11741 AMIN domain AW19_2289 PF01520 N-acetylmuramoyl-L-alanine amidase AW19_2290 PF00583 Acetyltransferase (GNAT) family AW19_2290 PF00696 Amino acid kinase family AW19_2291 PF13538 UvrD-like helicase C-terminal domain AW19_2292 PF13361 UvrD-like helicase C-terminal domain AW19_2292 PF00580 UvrD/REP helicase N-terminal domain AW19_2292 PF12705 PD-(D/E)XK nuclease superfamily AW19_2293 PF16187 Middle or third domain of peptidase_M16 AW19_2293 PF05193 Peptidase M16 inactive domain AW19_2293 PF00675 Insulinase (Peptidase family M16) AW19_2294 PF17946 RecC C-terminal domain AW19_2295 PF12528 Type II secretion prepilin peptidase dependent protein C AW19_2295 PF07963 Prokaryotic N-terminal methylation motif AW19_2299 PF00303 Thymidylate synthase AW19_23 PF11862 Domain of unknown function (DUF3382) AW19_23 PF02653 Branched-chain amino acid transport system / permease component AW19_2300 PF01790 Prolipoprotein diacylglyceryl transferase AW19_2301 PF01590 GAF domain AW19_2301 PF05524 PEP-utilising enzyme, N-terminal AW19_2301 PF02896 PEP-utilising enzyme, TIM barrel domain AW19_2301 PF00391 PEP-utilising enzyme, mobile domain AW19_2302 PF00293 NUDIX domain AW19_2303 PF02976 DNA mismatch repair enzyme MutH AW19_2304 PF03741 Integral membrane protein TerC family AW19_2305 PF00248 Aldo/keto reductase family AW19_2306 PF07690 Major Facilitator Superfamily AW19_2307 PF01553 Acyltransferase AW19_2307 PF13193 AMP-binding enzyme C-terminal domain AW19_2307 PF00501 AMP-binding enzyme AW19_2308 PF01568 Molydopterin dinucleotide binding domain AW19_2308 PF00384 Molybdopterin oxidoreductase AW19_2309 PF00356 Bacterial regulatory proteins, lacI family AW19_2310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AW19_2310 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AW19_2311 PF03466 LysR substrate binding domain AW19_2311 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_2312 PF07690 Major Facilitator Superfamily AW19_2313 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_2313 PF03466 LysR substrate binding domain AW19_2317 PF02203 Tar ligand binding domain homologue AW19_2317 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AW19_2317 PF00672 HAMP domain AW19_2320 PF01478 Type IV leader peptidase family AW19_2320 PF06750 Bacterial Peptidase A24 N-terminal domain AW19_2323 PF12693 GspL periplasmic domain AW19_2323 PF05134 Type II secretion system (T2SS), protein L AW19_2325 PF11612 Type II secretion system (T2SS), protein J AW19_2325 PF07963 Prokaryotic N-terminal methylation motif AW19_2327 PF07963 Prokaryotic N-terminal methylation motif AW19_2327 PF08334 Type II secretion system (T2SS), protein G AW19_2328 PF00482 Type II secretion system (T2SS), protein F AW19_2329 PF00437 Type II/IV secretion system protein AW19_2330 PF00263 Bacterial type II and III secretion system protein AW19_2330 PF03958 Bacterial type II/III secretion system short domain AW19_2333 PF00484 Carbonic anhydrase AW19_2334 PF01638 HxlR-like helix-turn-helix AW19_2337 PF00226 DnaJ domain AW19_2337 PF01556 DnaJ C terminal domain AW19_2338 PF00356 Bacterial regulatory proteins, lacI family AW19_2339 PF07690 Major Facilitator Superfamily AW19_2340 PF17137 Domain of unknown function (DUF5110) AW19_2340 PF01055 Glycosyl hydrolases family 31 AW19_2340 PF16338 Domain of unknown function (DUF4968) AW19_2340 PF13802 Galactose mutarotase-like AW19_2342 PF01037 Lrp/AsnC ligand binding domain AW19_2357 PF00665 Integrase core domain AW19_2358 PF01527 Transposase AW19_2361 PF02796 Helix-turn-helix domain of resolvase AW19_2361 PF00239 Resolvase, N terminal domain AW19_2363 PF01336 OB-fold nucleic acid binding domain AW19_2363 PF00152 tRNA synthetases class II (D, K and N) AW19_2364 PF03462 PCRF domain AW19_2364 PF00472 RF-1 domain AW19_2365 PF17768 RecJ OB domain AW19_2365 PF01368 DHH family AW19_2365 PF02272 DHHA1 domain AW19_2366 PF10411 Disulfide bond isomerase protein N-terminus AW19_2366 PF13098 Thioredoxin-like domain AW19_2367 PF02899 Phage integrase, N-terminal SAM-like domain AW19_2367 PF00589 Phage integrase family AW19_2368 PF00258 Flavodoxin AW19_2369 PF06123 Inner membrane protein CreD AW19_2370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_2370 PF00512 His Kinase A (phospho-acceptor) domain AW19_2370 PF00672 HAMP domain AW19_2371 PF00072 Response regulator receiver domain AW19_2371 PF00486 Transcriptional regulatory protein, C terminal AW19_2372 PF07254 Membrane-bound toxin component of toxin-antitoxin system AW19_2373 PF03937 Flavinator of succinate dehydrogenase AW19_2374 PF01571 Aminomethyltransferase folate-binding domain AW19_2375 PF03006 Haemolysin-III related AW19_2378 PF02347 Glycine cleavage system P-protein AW19_2379 PF01597 Glycine cleavage H-protein AW19_2380 PF08669 Glycine cleavage T-protein C-terminal barrel domain AW19_2380 PF01571 Aminomethyltransferase folate-binding domain AW19_2381 PF01494 FAD binding domain AW19_2382 PF01494 FAD binding domain AW19_2383 PF00557 Metallopeptidase family M24 AW19_2383 PF05195 Aminopeptidase P, N-terminal domain AW19_2384 PF03695 Uncharacterised protein family (UPF0149) AW19_2385 PF05164 Cell division protein ZapA AW19_2386 PF01812 5-formyltetrahydrofolate cyclo-ligase family AW19_2387 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AW19_2387 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AW19_2387 PF01842 ACT domain AW19_2388 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AW19_2389 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_2389 PF03466 LysR substrate binding domain AW19_2390 PF04402 Protein of unknown function (DUF541) AW19_2391 PF01810 LysE type translocator AW19_2392 PF00924 Mechanosensitive ion channel AW19_2392 PF05552 Conserved TM helix AW19_2394 PF01116 Fructose-bisphosphate aldolase class-II AW19_2395 PF00162 Phosphoglycerate kinase AW19_2396 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AW19_2396 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AW19_2397 PF00456 Transketolase, thiamine diphosphate binding domain AW19_2397 PF02780 Transketolase, C-terminal domain AW19_2397 PF02779 Transketolase, pyrimidine binding domain AW19_2398 PF01435 Peptidase family M48 AW19_2399 PF00355 Rieske [2Fe-2S] domain AW19_24 PF02653 Branched-chain amino acid transport system / permease component AW19_2400 PF17810 Arginine decarboxylase helical bundle domain AW19_2400 PF17944 Arginine decarboxylase C-terminal helical extension AW19_2400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AW19_2401 PF02772 S-adenosylmethionine synthetase, central domain AW19_2401 PF00438 S-adenosylmethionine synthetase, N-terminal domain AW19_2401 PF02773 S-adenosylmethionine synthetase, C-terminal domain AW19_2404 PF04143 Sulphur transport AW19_2406 PF10263 SprT-like family AW19_2406 PF17283 SprT-like zinc ribbon domain AW19_2407 PF04231 Endonuclease I AW19_2408 PF04452 RNA methyltransferase AW19_2409 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AW19_2409 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AW19_2410 PF02622 Uncharacterized ACR, COG1678 AW19_2411 PF03652 Holliday junction resolvase AW19_2412 PF00795 Carbon-nitrogen hydrolase AW19_2413 PF04371 Porphyromonas-type peptidyl-arginine deiminase AW19_2414 PF00437 Type II/IV secretion system protein AW19_2415 PF01168 Alanine racemase, N-terminal domain AW19_2416 PF03807 NADP oxidoreductase coenzyme F420-dependent AW19_2416 PF14748 Pyrroline-5-carboxylate reductase dimerisation AW19_2417 PF02325 YGGT family AW19_2418 PF02594 Uncharacterised ACR, YggU family COG1872 AW19_2419 PF01725 Ham1 family AW19_2420 PF06969 HemN C-terminal domain AW19_2420 PF04055 Radical SAM superfamily AW19_2421 PF11101 Protein of unknown function (DUF2884) AW19_2422 PF04960 Glutaminase AW19_2423 PF04320 Protein with unknown function (DUF469) AW19_2424 PF02390 Putative methyltransferase AW19_2425 PF14815 NUDIX domain AW19_2425 PF00730 HhH-GPD superfamily base excision DNA repair protein AW19_2425 PF00633 Helix-hairpin-helix motif AW19_2425 PF10576 Iron-sulfur binding domain of endonuclease III AW19_2426 PF04362 Bacterial Fe(2+) trafficking AW19_2427 PF01464 Transglycosylase SLT domain AW19_2427 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AW19_2429 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AW19_2429 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AW19_2429 PF01276 Orn/Lys/Arg decarboxylase, major domain AW19_2431 PF00589 Phage integrase family AW19_2432 PF01527 Transposase AW19_2433 PF00665 Integrase core domain AW19_2435 PF00772 DnaB-like helicase N terminal domain AW19_2435 PF03796 DnaB-like helicase C terminal domain AW19_2436 PF13614 AAA domain AW19_2437 PF00589 Phage integrase family AW19_2437 PF14659 Phage integrase, N-terminal SAM-like domain AW19_2437 PF13356 Arm DNA-binding domain AW19_244 PF01258 Prokaryotic dksA/traR C4-type zinc finger AW19_2442 PF00580 UvrD/REP helicase N-terminal domain AW19_2442 PF13361 UvrD-like helicase C-terminal domain AW19_2446 PF06932 Protein of unknown function (DUF1283) AW19_2464 PF00004 ATPase family associated with various cellular activities (AAA) AW19_2464 PF10431 C-terminal, D2-small domain, of ClpB protein AW19_2464 PF17871 AAA lid domain AW19_2464 PF07724 AAA domain (Cdc48 subfamily) AW19_2466 PF00691 OmpA family AW19_2466 PF05736 OprF membrane domain AW19_2472 PF02574 Homocysteine S-methyltransferase AW19_2473 PF03230 Antirestriction protein AW19_2474 PF04002 RadC-like JAB domain AW19_2476 PF06755 CbtA_toxin of type IV toxin-antitoxin system AW19_2477 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A AW19_2484 PF00356 Bacterial regulatory proteins, lacI family AW19_2488 PF03466 LysR substrate binding domain AW19_2488 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_2489 PF00248 Aldo/keto reductase family AW19_2490 PF00528 Binding-protein-dependent transport system inner membrane component AW19_2491 PF00005 ABC transporter AW19_2492 PF09084 NMT1/THI5 like AW19_2494 PF00296 Luciferase-like monooxygenase AW19_25 PF13458 Periplasmic binding protein AW19_2514 PF00182 Chitinase class I AW19_2521 PF00182 Chitinase class I AW19_2523 PF00004 ATPase family associated with various cellular activities (AAA) AW19_2523 PF07724 AAA domain (Cdc48 subfamily) AW19_2523 PF17871 AAA lid domain AW19_2523 PF10431 C-terminal, D2-small domain, of ClpB protein AW19_2525 PF13488 Glycine zipper AW19_2525 PF00691 OmpA family AW19_2532 PF04632 Fusaric acid resistance protein family AW19_2533 PF00529 HlyD membrane-fusion protein of T1SS AW19_2533 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AW19_2537 PF00557 Metallopeptidase family M24 AW19_2538 PF00005 ABC transporter AW19_2539 PF01032 FecCD transport family AW19_2540 PF01032 FecCD transport family AW19_2541 PF01497 Periplasmic binding protein AW19_2544 PF07690 Major Facilitator Superfamily AW19_2544 PF00083 Sugar (and other) transporter AW19_2545 PF00356 Bacterial regulatory proteins, lacI family AW19_2547 PF01156 Inosine-uridine preferring nucleoside hydrolase AW19_2548 PF02690 Na+/Pi-cotransporter AW19_2549 PF07687 Peptidase dimerisation domain AW19_2549 PF01546 Peptidase family M20/M25/M40 AW19_2550 PF03806 AbgT putative transporter family AW19_2551 PF03797 Autotransporter beta-domain AW19_2554 PF00873 AcrB/AcrD/AcrF family AW19_2555 PF00529 HlyD membrane-fusion protein of T1SS AW19_2555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AW19_2556 PF08447 PAS fold AW19_2556 PF08448 PAS fold AW19_2556 PF00990 Diguanylate cyclase, GGDEF domain AW19_2556 PF00563 EAL domain AW19_2558 PF01300 Telomere recombination AW19_2558 PF07503 HypF finger AW19_2558 PF00708 Acylphosphatase AW19_2558 PF17788 HypF Kae1-like domain AW19_2559 PF02769 AIR synthase related protein, C-terminal domain AW19_2559 PF00586 AIR synthase related protein, N-terminal domain AW19_2560 PF01924 Hydrogenase formation hypA family AW19_2561 PF01455 HupF/HypC family AW19_2562 PF02492 CobW/HypB/UreG, nucleotide-binding domain AW19_2563 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AW19_2564 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE AW19_2565 PF01750 Hydrogenase maturation protease AW19_2566 PF00374 Nickel-dependent hydrogenase AW19_2567 PF03916 Polysulphide reductase, NrfD AW19_2568 PF13247 4Fe-4S dicluster domain AW19_2569 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AW19_2569 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AW19_2570 PF05433 Glycine zipper 2TM domain AW19_2571 PF00691 OmpA family AW19_2571 PF13677 Membrane MotB of proton-channel complex MotA/MotB AW19_2572 PF01618 MotA/TolQ/ExbB proton channel family AW19_2573 PF04545 Sigma-70, region 4 AW19_2573 PF04542 Sigma-70 region 2 AW19_2577 PF02561 Flagellar protein FliS AW19_2578 PF02465 Flagellar hook-associated protein 2 N-terminus AW19_2578 PF07196 Flagellin hook IN motif AW19_2578 PF07195 Flagellar hook-associated protein 2 C-terminus AW19_2579 PF00700 Bacterial flagellin C-terminal helical region AW19_2579 PF00669 Bacterial flagellin N-terminal helical region AW19_2580 PF18500 CadC C-terminal domain 1 AW19_2580 PF00486 Transcriptional regulatory protein, C terminal AW19_2583 PF00669 Bacterial flagellin N-terminal helical region AW19_2586 PF02119 Flagellar P-ring protein AW19_2587 PF02107 Flagellar L-ring protein AW19_2588 PF00460 Flagella basal body rod protein AW19_2588 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AW19_2589 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AW19_2589 PF00460 Flagella basal body rod protein AW19_2590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AW19_2590 PF00460 Flagella basal body rod protein AW19_2590 PF07559 Flagellar basal body protein FlaE AW19_2591 PF03963 Flagellar hook capping protein - N-terminal region AW19_2591 PF13861 FlgD Tudor-like domain AW19_2591 PF13860 FlgD Ig-like domain AW19_2592 PF00460 Flagella basal body rod protein AW19_2592 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AW19_2593 PF00460 Flagella basal body rod protein AW19_2598 PF18269 T3SS EscN ATPase C-terminal domain AW19_2598 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AW19_26 PF05683 Fumarase C-terminus AW19_26 PF05681 Fumarate hydratase (Fumerase) AW19_2601 PF01514 Secretory protein of YscJ/FliF family AW19_2601 PF08345 Flagellar M-ring protein C-terminal AW19_2602 PF02049 Flagellar hook-basal body complex protein FliE AW19_2603 PF00072 Response regulator receiver domain AW19_2603 PF00158 Sigma-54 interaction domain AW19_2603 PF02954 Bacterial regulatory protein, Fis family AW19_2605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AW19_2606 PF00813 FliP family AW19_2607 PF01313 Bacterial export proteins, family 3 AW19_2608 PF01311 Bacterial export proteins, family 1 AW19_2609 PF01312 FlhB HrpN YscU SpaS Family AW19_2610 PF00771 FHIPEP family AW19_2612 PF01370 NAD dependent epimerase/dehydratase family AW19_2613 PF07690 Major Facilitator Superfamily AW19_2615 PF00550 Phosphopantetheine attachment site AW19_2615 PF00857 Isochorismatase family AW19_2616 PF00501 AMP-binding enzyme AW19_2616 PF13193 AMP-binding enzyme C-terminal domain AW19_2617 PF00425 chorismate binding enzyme AW19_2618 PF01497 Periplasmic binding protein AW19_2619 PF00005 ABC transporter AW19_2620 PF01032 FecCD transport family AW19_2621 PF01032 FecCD transport family AW19_2623 PF05977 Transmembrane secretion effector AW19_2624 PF00668 Condensation domain AW19_2624 PF13193 AMP-binding enzyme C-terminal domain AW19_2624 PF00501 AMP-binding enzyme AW19_2624 PF00975 Thioesterase domain AW19_2624 PF00550 Phosphopantetheine attachment site AW19_2625 PF03621 MbtH-like protein AW19_2626 PF11806 Domain of unknown function (DUF3327) AW19_2626 PF00756 Putative esterase AW19_2627 PF07715 TonB-dependent Receptor Plug Domain AW19_2627 PF00593 TonB dependent receptor AW19_2631 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AW19_2631 PF00529 HlyD membrane-fusion protein of T1SS AW19_2632 PF00873 AcrB/AcrD/AcrF family AW19_2633 PF13532 2OG-Fe(II) oxygenase superfamily AW19_2638 PF04972 BON domain AW19_2638 PF00263 Bacterial type II and III secretion system protein AW19_2638 PF13629 Pilus formation protein N terminal region AW19_2641 PF00437 Type II/IV secretion system protein AW19_2648 PF02472 Biopolymer transport protein ExbD/TolR AW19_2649 PF01618 MotA/TolQ/ExbB proton channel family AW19_2650 PF01053 Cys/Met metabolism PLP-dependent enzyme AW19_2651 PF09335 SNARE associated Golgi protein AW19_2652 PF12833 Helix-turn-helix domain AW19_2652 PF06719 AraC-type transcriptional regulator N-terminus AW19_2653 PF00465 Iron-containing alcohol dehydrogenase AW19_2654 PF00248 Aldo/keto reductase family AW19_2655 PF08497 Radical SAM N-terminal AW19_2655 PF04055 Radical SAM superfamily AW19_2655 PF11842 Domain of unknown function (DUF3362) AW19_2656 PF07732 Multicopper oxidase AW19_2656 PF07731 Multicopper oxidase AW19_2657 PF01553 Acyltransferase AW19_2658 PF03989 DNA gyrase C-terminal domain, beta-propeller AW19_2658 PF00521 DNA gyrase/topoisomerase IV, subunit A AW19_2659 PF02525 Flavodoxin-like fold AW19_2660 PF03992 Antibiotic biosynthesis monooxygenase AW19_2661 PF03466 LysR substrate binding domain AW19_2661 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_2662 PF00204 DNA gyrase B AW19_2662 PF01751 Toprim domain AW19_2662 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_2662 PF00986 DNA gyrase B subunit, carboxyl terminus AW19_2663 PF05728 Uncharacterised protein family (UPF0227) AW19_2664 PF00149 Calcineurin-like phosphoesterase AW19_2665 PF06853 Protein of unknown function (DUF1249) AW19_2666 PF00293 NUDIX domain AW19_2667 PF02321 Outer membrane efflux protein AW19_2668 PF06693 Protein of unknown function (DUF1190) AW19_2669 PF03738 Glutathionylspermidine synthase preATP-grasp AW19_2670 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AW19_2671 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AW19_2672 PF04380 Membrane fusogenic activity AW19_2673 PF13520 Amino acid permease AW19_2674 PF01467 Cytidylyltransferase-like AW19_2674 PF00294 pfkB family carbohydrate kinase AW19_2675 PF03710 Glutamate-ammonia ligase adenylyltransferase AW19_2675 PF08335 GlnD PII-uridylyltransferase AW19_2676 PF01928 CYTH domain AW19_2677 PF08239 Bacterial SH3 domain AW19_2678 PF01966 HD domain AW19_2678 PF01743 Poly A polymerase head domain AW19_2678 PF12627 Probable RNA and SrmB- binding site of polymerase A AW19_2679 PF02673 Bacitracin resistance protein BacA AW19_2680 PF02152 Dihydroneopterin aldolase AW19_2681 PF02660 Glycerol-3-phosphate acyltransferase AW19_2682 PF00814 Glycoprotease family AW19_2684 PF01165 Ribosomal protein S21 AW19_2685 PF08275 DNA primase catalytic core, N-terminal domain AW19_2685 PF10410 DnaB-helicase binding domain of primase AW19_2685 PF08278 DNA primase DnaG DnaB-binding AW19_2685 PF01807 CHC2 zinc finger AW19_2686 PF04546 Sigma-70, non-essential region AW19_2686 PF03979 Sigma-70 factor, region 1.1 AW19_2686 PF04545 Sigma-70, region 4 AW19_2686 PF00140 Sigma-70 factor, region 1.2 AW19_2686 PF04542 Sigma-70 region 2 AW19_2686 PF04539 Sigma-70 region 3 AW19_2688 PF07075 Protein of unknown function (DUF1343) AW19_2690 PF00933 Glycosyl hydrolase family 3 N terminal domain AW19_2690 PF01915 Glycosyl hydrolase family 3 C-terminal domain AW19_2691 PF01380 SIS domain AW19_2691 PF01418 Helix-turn-helix domain, rpiR family AW19_2692 PF13580 SIS domain AW19_2693 PF02378 Phosphotransferase system, EIIC AW19_2693 PF00367 phosphotransferase system, EIIB AW19_2694 PF04960 Glutaminase AW19_2695 PF13520 Amino acid permease AW19_2696 PF00282 Pyridoxal-dependent decarboxylase conserved domain AW19_2698 PF03729 Short repeat of unknown function (DUF308) AW19_27 PF01568 Molydopterin dinucleotide binding domain AW19_27 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AW19_27 PF00384 Molybdopterin oxidoreductase AW19_2700 PF07992 Pyridine nucleotide-disulphide oxidoreductase AW19_2700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AW19_2701 PF05175 Methyltransferase small domain AW19_2703 PF01863 Protein of unknown function DUF45 AW19_2704 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AW19_2705 PF03741 Integral membrane protein TerC family AW19_2706 PF00375 Sodium:dicarboxylate symporter family AW19_2707 PF10688 Bacterial inner membrane protein AW19_2708 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AW19_2708 PF08666 SAF domain AW19_2709 PF01232 Mannitol dehydrogenase Rossmann domain AW19_2709 PF08125 Mannitol dehydrogenase C-terminal domain AW19_271 PF01757 Acyltransferase family AW19_2710 PF02614 Glucuronate isomerase AW19_2711 PF07690 Major Facilitator Superfamily AW19_2712 PF07729 FCD domain AW19_2712 PF00392 Bacterial regulatory proteins, gntR family AW19_2714 PF09335 SNARE associated Golgi protein AW19_2715 PF13721 SecD export protein N-terminal TM region AW19_2717 PF05957 Bacterial protein of unknown function (DUF883) AW19_2718 PF07332 Putative Actinobacterial Holin-X, holin superfamily III AW19_2719 PF13997 YqjK-like protein AW19_2720 PF07681 DoxX AW19_2721 PF13409 Glutathione S-transferase, N-terminal domain AW19_2722 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_2722 PF03466 LysR substrate binding domain AW19_2723 PF02678 Pirin AW19_2723 PF17954 Quercetinase C-terminal cupin domain AW19_2724 PF08240 Alcohol dehydrogenase GroES-like domain AW19_2724 PF00107 Zinc-binding dehydrogenase AW19_2725 PF00106 short chain dehydrogenase AW19_2727 PF00248 Aldo/keto reductase family AW19_2728 PF03466 LysR substrate binding domain AW19_2728 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_2732 PF13599 Pentapeptide repeats (9 copies) AW19_2733 PF01381 Helix-turn-helix AW19_2735 PF00145 C-5 cytosine-specific DNA methylase AW19_2737 PF02796 Helix-turn-helix domain of resolvase AW19_2737 PF00239 Resolvase, N terminal domain AW19_2744 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AW19_2745 PF04348 LppC putative lipoprotein AW19_2746 PF02021 Uncharacterised protein family UPF0102 AW19_2747 PF13580 SIS domain AW19_2748 PF04972 BON domain AW19_2749 PF00912 Transglycosylase AW19_2751 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_2751 PF00512 His Kinase A (phospho-acceptor) domain AW19_2751 PF00072 Response regulator receiver domain AW19_2751 PF18415 Histidine kinase receptor ArcB trans-membrane domain AW19_2751 PF00989 PAS fold AW19_2751 PF01627 Hpt domain AW19_2752 PF16199 Radical_SAM C-terminal domain AW19_2752 PF04055 Radical SAM superfamily AW19_2753 PF01493 GXGXG motif AW19_2753 PF01645 Conserved region in glutamate synthase AW19_2753 PF04898 Glutamate synthase central domain AW19_2753 PF00310 Glutamine amidotransferases class-II AW19_2754 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AW19_2754 PF07992 Pyridine nucleotide-disulphide oxidoreductase AW19_2756 PF04386 Stringent starvation protein B AW19_2757 PF00043 Glutathione S-transferase, C-terminal domain AW19_2757 PF02798 Glutathione S-transferase, N-terminal domain AW19_2758 PF00380 Ribosomal protein S9/S16 AW19_2759 PF00572 Ribosomal protein L13 AW19_2760 PF03969 AFG1-like ATPase AW19_2761 PF06295 Protein of unknown function (DUF1043) AW19_2762 PF00595 PDZ domain AW19_2762 PF13180 PDZ domain AW19_2763 PF13180 PDZ domain AW19_2764 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AW19_2765 PF01722 BolA-like protein AW19_2766 PF13466 STAS domain AW19_2767 PF05494 MlaC protein AW19_2768 PF02470 MlaD protein AW19_2769 PF02405 Permease MlaE AW19_277 PF00732 GMC oxidoreductase AW19_277 PF05199 GMC oxidoreductase AW19_2770 PF00005 ABC transporter AW19_2771 PF01699 Sodium/calcium exchanger protein AW19_2772 PF01380 SIS domain AW19_2772 PF00571 CBS domain AW19_2774 PF06835 Lipopolysaccharide-assembly, LptC-related AW19_2775 PF03968 OstA-like protein AW19_2776 PF12399 Branched-chain amino acid ATP-binding cassette transporter AW19_2776 PF00005 ABC transporter AW19_2777 PF00309 Sigma-54 factor, Activator interacting domain (AID) AW19_2777 PF04552 Sigma-54, DNA binding domain AW19_2777 PF04963 Sigma-54 factor, core binding domain AW19_2778 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AW19_2779 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AW19_278 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AW19_278 PF00034 Cytochrome c AW19_2780 PF03668 P-loop ATPase protein family AW19_2781 PF00381 PTS HPr component phosphorylation site AW19_2783 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AW19_2783 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AW19_2784 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AW19_2784 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AW19_2785 PF01042 Endoribonuclease L-PSP AW19_2786 PF00128 Alpha amylase, catalytic domain AW19_2786 PF11941 Domain of unknown function (DUF3459) AW19_2787 PF00367 phosphotransferase system, EIIB AW19_2787 PF02378 Phosphotransferase system, EIIC AW19_2788 PF00356 Bacterial regulatory proteins, lacI family AW19_2789 PF00689 Cation transporting ATPase, C-terminus AW19_2789 PF00690 Cation transporter/ATPase, N-terminus AW19_279 PF08543 Phosphomethylpyrimidine kinase AW19_2790 PF08279 HTH domain AW19_2790 PF05043 Mga helix-turn-helix domain AW19_2790 PF00874 PRD domain AW19_2790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AW19_2791 PF10282 Lactonase, 7-bladed beta-propeller AW19_2792 PF07071 KDGP aldolase AW19_2793 PF03841 L-seryl-tRNA selenium transferase AW19_2794 PF01979 Amidohydrolase family AW19_28 PF13247 4Fe-4S dicluster domain AW19_28 PF12800 4Fe-4S binding domain AW19_2800 PF01272 Transcription elongation factor, GreA/GreB, C-term AW19_2800 PF14760 Rnk N-terminus AW19_2801 PF07361 Cytochrome b562 AW19_2802 PF01523 Putative modulator of DNA gyrase AW19_2803 PF04751 Protein of unknown function (DUF615) AW19_2804 PF01337 Barstar (barnase inhibitor) AW19_2806 PF00171 Aldehyde dehydrogenase family AW19_2807 PF04632 Fusaric acid resistance protein family AW19_2808 PF13533 Biotin-lipoyl like AW19_2809 PF07869 Protein of unknown function (DUF1656) AW19_2810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_2810 PF03466 LysR substrate binding domain AW19_2811 PF01523 Putative modulator of DNA gyrase AW19_2812 PF00795 Carbon-nitrogen hydrolase AW19_2813 PF13116 Protein of unknown function AW19_2813 PF13502 AsmA-like C-terminal region AW19_2814 PF10150 Ribonuclease E/G family AW19_2814 PF00575 S1 RNA binding domain AW19_2815 PF02545 Maf-like protein AW19_2816 PF04093 rod shape-determining protein MreD AW19_2817 PF04085 rod shape-determining protein MreC AW19_2819 PF00990 Diguanylate cyclase, GGDEF domain AW19_2819 PF00563 EAL domain AW19_2819 PF17157 Gammaproteobacterial periplasmic sensor domain AW19_282 PF00571 CBS domain AW19_282 PF01380 SIS domain AW19_2820 PF08240 Alcohol dehydrogenase GroES-like domain AW19_2820 PF00107 Zinc-binding dehydrogenase AW19_2821 PF00174 Oxidoreductase molybdopterin binding domain AW19_2822 PF01794 Ferric reductase like transmembrane component AW19_2823 PF01220 Dehydroquinase class II AW19_2824 PF00364 Biotin-requiring enzyme AW19_2825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AW19_2825 PF00289 Biotin carboxylase, N-terminal domain AW19_2825 PF02785 Biotin carboxylase C-terminal domain AW19_2826 PF06196 Protein of unknown function (DUF997) AW19_2827 PF00474 Sodium:solute symporter family AW19_2829 PF01207 Dihydrouridine synthase (Dus) AW19_283 PF08220 DeoR-like helix-turn-helix domain AW19_283 PF00455 DeoR C terminal sensor domain AW19_2830 PF02954 Bacterial regulatory protein, Fis family AW19_2831 PF00990 Diguanylate cyclase, GGDEF domain AW19_2831 PF08448 PAS fold AW19_2832 PF05433 Glycine zipper 2TM domain AW19_2833 PF00313 'Cold-shock' DNA-binding domain AW19_2834 PF00313 'Cold-shock' DNA-binding domain AW19_2836 PF00939 Sodium:sulfate symporter transmembrane region AW19_2837 PF03279 Bacterial lipid A biosynthesis acyltransferase AW19_284 PF06923 Glucitol operon activator protein (GutM) AW19_2840 PF03788 LrgA family AW19_2841 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_2841 PF03466 LysR substrate binding domain AW19_2842 PF00999 Sodium/hydrogen exchanger family AW19_2843 PF00860 Permease family AW19_2848 PF00436 Single-strand binding protein family AW19_2849 PF00005 ABC transporter AW19_2849 PF17755 UvrA DNA-binding domain AW19_2849 PF17760 UvrA interaction domain AW19_285 PF00106 short chain dehydrogenase AW19_2850 PF04237 YjbR AW19_2851 PF00155 Aminotransferase class I and II AW19_2852 PF01168 Alanine racemase, N-terminal domain AW19_2852 PF00842 Alanine racemase, C-terminal domain AW19_2853 PF03796 DnaB-like helicase C terminal domain AW19_2853 PF00772 DnaB-like helicase N terminal domain AW19_2854 PF08240 Alcohol dehydrogenase GroES-like domain AW19_2854 PF00107 Zinc-binding dehydrogenase AW19_2856 PF09583 Phage shock protein G (Phageshock_PspG) AW19_2857 PF01207 Dihydrouridine synthase (Dus) AW19_2858 PF01475 Ferric uptake regulator family AW19_2859 PF05532 CsbD-like AW19_286 PF03829 PTS system glucitol/sorbitol-specific IIA component AW19_2860 PF00717 Peptidase S24-like AW19_2860 PF01726 LexA DNA binding domain AW19_2861 PF01219 Prokaryotic diacylglycerol kinase AW19_2862 PF01553 Acyltransferase AW19_2863 PF01040 UbiA prenyltransferase family AW19_2864 PF04345 Chorismate lyase AW19_2866 PF07148 Maltose operon periplasmic protein precursor (MalM) AW19_2867 PF02264 LamB porin AW19_2868 PF00005 ABC transporter AW19_2868 PF17912 MalK OB fold domain AW19_2869 PF01547 Bacterial extracellular solute-binding protein AW19_287 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AW19_287 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AW19_2870 PF00528 Binding-protein-dependent transport system inner membrane component AW19_2870 PF14785 Maltose transport system permease protein MalF P2 domain AW19_2871 PF00528 Binding-protein-dependent transport system inner membrane component AW19_2872 PF06146 Phosphate-starvation-inducible E AW19_2873 PF00342 Phosphoglucose isomerase AW19_2875 PF01842 ACT domain AW19_2875 PF00696 Amino acid kinase family AW19_2876 PF01758 Sodium Bile acid symporter family AW19_2877 PF08479 POTRA domain, ShlB-type AW19_2877 PF17287 POTRA domain AW19_2877 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AW19_2878 PF13332 Hemagglutinin repeat AW19_2878 PF05860 haemagglutination activity domain AW19_2879 PF02310 B12 binding domain AW19_2879 PF02607 B12 binding domain AW19_2879 PF02965 Vitamin B12 dependent methionine synthase, activation domain AW19_2879 PF00809 Pterin binding enzyme AW19_2879 PF02574 Homocysteine S-methyltransferase AW19_288 PF03608 PTS system enzyme II sorbitol-specific factor AW19_2880 PF09339 IclR helix-turn-helix domain AW19_2880 PF01614 Bacterial transcriptional regulator AW19_2881 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AW19_2882 PF00463 Isocitrate lyase family AW19_2883 PF01274 Malate synthase AW19_2884 PF04204 Homoserine O-succinyltransferase AW19_289 PF00781 Diacylglycerol kinase catalytic domain AW19_2893 PF01808 AICARFT/IMPCHase bienzyme AW19_2893 PF02142 MGS-like domain AW19_2894 PF02844 Phosphoribosylglycinamide synthetase, N domain AW19_2894 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AW19_2894 PF02843 Phosphoribosylglycinamide synthetase, C domain AW19_2895 PF07356 Protein of unknown function (DUF1481) AW19_2896 PF00216 Bacterial DNA-binding protein AW19_2897 PF04222 Protein of unknown function (DUF416) AW19_2898 PF04493 Endonuclease V AW19_2899 PF01208 Uroporphyrinogen decarboxylase (URO-D) AW19_29 PF04976 DMSO reductase anchor subunit (DmsC) AW19_2900 PF09297 NADH pyrophosphatase zinc ribbon domain AW19_2900 PF00293 NUDIX domain AW19_2901 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AW19_2902 PF13667 ThiC-associated domain AW19_2902 PF01964 Radical SAM ThiC family AW19_2903 PF02581 Thiamine monophosphate synthase AW19_2904 PF00899 ThiF family AW19_2905 PF02597 ThiS family AW19_2906 PF05690 Thiazole biosynthesis protein ThiG AW19_2907 PF06968 Biotin and Thiamin Synthesis associated domain AW19_2907 PF04055 Radical SAM superfamily AW19_2908 PF05000 RNA polymerase Rpb1, domain 4 AW19_2908 PF04998 RNA polymerase Rpb1, domain 5 AW19_2908 PF04983 RNA polymerase Rpb1, domain 3 AW19_2908 PF04997 RNA polymerase Rpb1, domain 1 AW19_2908 PF00623 RNA polymerase Rpb1, domain 2 AW19_2909 PF04561 RNA polymerase Rpb2, domain 2 AW19_2909 PF04565 RNA polymerase Rpb2, domain 3 AW19_2909 PF10385 RNA polymerase beta subunit external 1 domain AW19_2909 PF00562 RNA polymerase Rpb2, domain 6 AW19_2909 PF04560 RNA polymerase Rpb2, domain 7 AW19_2909 PF04563 RNA polymerase beta subunit AW19_291 PF07411 Domain of unknown function (DUF1508) AW19_2910 PF16320 Ribosomal protein L7/L12 dimerisation domain AW19_2910 PF00542 Ribosomal protein L7/L12 C-terminal domain AW19_2911 PF00466 Ribosomal protein L10 AW19_2912 PF00687 Ribosomal protein L1p/L10e family AW19_2913 PF00298 Ribosomal protein L11, RNA binding domain AW19_2913 PF03946 Ribosomal protein L11, N-terminal domain AW19_2914 PF00467 KOW motif AW19_2914 PF02357 Transcription termination factor nusG AW19_2915 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AW19_2916 PF00009 Elongation factor Tu GTP binding domain AW19_2916 PF03144 Elongation factor Tu domain 2 AW19_2916 PF03143 Elongation factor Tu C-terminal domain AW19_292 PF00072 Response regulator receiver domain AW19_292 PF00486 Transcriptional regulatory protein, C terminal AW19_2924 PF13673 Acetyltransferase (GNAT) domain AW19_2925 PF00485 Phosphoribulokinase / Uridine kinase family AW19_2926 PF03099 Biotin/lipoate A/B protein ligase family AW19_2926 PF02237 Biotin protein ligase C terminal domain AW19_2926 PF08279 HTH domain AW19_2927 PF01565 FAD binding domain AW19_2927 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AW19_293 PF00512 His Kinase A (phospho-acceptor) domain AW19_293 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_293 PF00672 HAMP domain AW19_2932 PF12724 Flavodoxin domain AW19_2933 PF02386 Cation transport protein AW19_2934 PF01205 Uncharacterized protein family UPF0029 AW19_2934 PF09186 Domain of unknown function (DUF1949) AW19_2935 PF00557 Metallopeptidase family M24 AW19_2936 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AW19_2936 PF00378 Enoyl-CoA hydratase/isomerase AW19_2936 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AW19_2937 PF02803 Thiolase, C-terminal domain AW19_2937 PF00108 Thiolase, N-terminal domain AW19_2938 PF00175 Oxidoreductase NAD-binding domain AW19_2938 PF00970 Oxidoreductase FAD-binding domain AW19_2939 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AW19_294 PF00873 AcrB/AcrD/AcrF family AW19_2940 PF02357 Transcription termination factor nusG AW19_2941 PF00490 Delta-aminolevulinic acid dehydratase AW19_2942 PF01026 TatD related DNase AW19_2943 PF00902 Sec-independent protein translocase protein (TatC) AW19_2945 PF02416 mttA/Hcf106 family AW19_2946 PF03109 ABC1 family AW19_2947 PF02036 SCP-2 sterol transfer family AW19_2948 PF01209 ubiE/COQ5 methyltransferase family AW19_2949 PF02646 RmuC family AW19_295 PF00873 AcrB/AcrD/AcrF family AW19_2950 PF09335 SNARE associated Golgi protein AW19_2951 PF13722 5TM C-terminal transporter carbon starvation CstA AW19_2951 PF02554 Carbon starvation protein CstA AW19_2953 PF01048 Phosphorylase superfamily AW19_2954 PF01738 Dienelactone hydrolase family AW19_2955 PF08267 Cobalamin-independent synthase, N-terminal domain AW19_2955 PF01717 Cobalamin-independent synthase, Catalytic domain AW19_2956 PF00892 EamA-like transporter family AW19_2957 PF03466 LysR substrate binding domain AW19_2957 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_2958 PF03547 Membrane transport protein AW19_2959 PF03009 Glycerophosphoryl diester phosphodiesterase family AW19_296 PF13533 Biotin-lipoyl like AW19_2960 PF17912 MalK OB fold domain AW19_2960 PF00005 ABC transporter AW19_2961 PF00528 Binding-protein-dependent transport system inner membrane component AW19_2962 PF00528 Binding-protein-dependent transport system inner membrane component AW19_2963 PF13416 Bacterial extracellular solute-binding protein AW19_2970 PF00005 ABC transporter AW19_2971 PF12399 Branched-chain amino acid ATP-binding cassette transporter AW19_2971 PF00005 ABC transporter AW19_2972 PF11862 Domain of unknown function (DUF3382) AW19_2972 PF02653 Branched-chain amino acid transport system / permease component AW19_2973 PF02653 Branched-chain amino acid transport system / permease component AW19_2974 PF13458 Periplasmic binding protein AW19_2975 PF12568 Acetyltransferase (GNAT) domain, PanZ AW19_2977 PF04542 Sigma-70 region 2 AW19_2977 PF00140 Sigma-70 factor, region 1.2 AW19_2977 PF04545 Sigma-70, region 4 AW19_2978 PF02687 FtsX-like permease family AW19_2978 PF18075 FtsX extracellular domain AW19_2979 PF00005 ABC transporter AW19_298 PF00012 Hsp70 protein AW19_2980 PF00448 SRP54-type protein, GTPase domain AW19_2980 PF02881 SRP54-type protein, helical bundle domain AW19_2982 PF06611 Protein of unknown function (DUF1145) AW19_2985 PF07947 YhhN family AW19_2986 PF00403 Heavy-metal-associated domain AW19_2987 PF01206 Sulfurtransferase TusA AW19_2988 PF02592 Putative vitamin uptake transporter AW19_2989 PF08786 DcrB AW19_299 PF08447 PAS fold AW19_299 PF13426 PAS domain AW19_299 PF00563 EAL domain AW19_299 PF05231 MASE1 AW19_299 PF00990 Diguanylate cyclase, GGDEF domain AW19_299 PF08448 PAS fold AW19_2990 PF02754 Cysteine-rich domain AW19_2990 PF13183 4Fe-4S dicluster domain AW19_2991 PF00890 FAD binding domain AW19_2992 PF01266 FAD dependent oxidoreductase AW19_2992 PF04324 BFD-like [2Fe-2S] binding domain AW19_2993 PF07690 Major Facilitator Superfamily AW19_2994 PF03009 Glycerophosphoryl diester phosphodiesterase family AW19_2996 PF12146 Serine aminopeptidase, S33 AW19_2997 PF01810 LysE type translocator AW19_2998 PF01810 LysE type translocator AW19_2999 PF00570 HRDC domain AW19_2999 PF16124 RecQ zinc-binding AW19_2999 PF09382 RQC domain AW19_2999 PF00271 Helicase conserved C-terminal domain AW19_2999 PF00270 DEAD/DEAH box helicase AW19_30 PF02613 Nitrate reductase delta subunit AW19_300 PF03448 MgtE intracellular N domain AW19_300 PF01769 Divalent cation transporter AW19_300 PF00571 CBS domain AW19_3000 PF02253 Phospholipase A1 AW19_3001 PF03061 Thioesterase superfamily AW19_3002 PF00892 EamA-like transporter family AW19_3003 PF01544 CorA-like Mg2+ transporter protein AW19_3005 PF09370 Phosphoenolpyruvate hydrolase-like AW19_3008 PF13361 UvrD-like helicase C-terminal domain AW19_3008 PF00580 UvrD/REP helicase N-terminal domain AW19_3009 PF13419 Haloacid dehalogenase-like hydrolase AW19_3010 PF02899 Phage integrase, N-terminal SAM-like domain AW19_3010 PF00589 Phage integrase family AW19_3011 PF04340 Protein of unknown function, DUF484 AW19_3012 PF01678 Diaminopimelate epimerase AW19_3013 PF13627 Prokaryotic lipoprotein-attachment site AW19_3014 PF01491 Frataxin-like domain AW19_3015 PF12633 Adenylate cyclase NT domain AW19_3015 PF01295 Adenylate cyclase, class-I AW19_3016 PF03900 Porphobilinogen deaminase, C-terminal domain AW19_3016 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AW19_3017 PF02602 Uroporphyrinogen-III synthase HemD AW19_3018 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AW19_3019 PF07719 Tetratricopeptide repeat AW19_3019 PF07219 HemY protein N-terminus AW19_302 PF02541 Ppx/GppA phosphatase family AW19_3026 PF00324 Amino acid permease AW19_3027 PF03808 Glycosyl transferase WecB/TagA/CpsF family AW19_3028 PF06899 WzyE protein, O-antigen assembly polymerase AW19_3029 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 AW19_303 PF13089 Polyphosphate kinase N-terminal domain AW19_303 PF02503 Polyphosphate kinase middle domain AW19_303 PF13090 Polyphosphate kinase C-terminal domain 2 AW19_303 PF17941 Polyphosphate kinase C-terminal domain 1 AW19_3030 PF01943 Polysaccharide biosynthesis protein AW19_3031 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AW19_3033 PF00483 Nucleotidyl transferase AW19_3034 PF16363 GDP-mannose 4,6 dehydratase AW19_3035 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AW19_3035 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AW19_3035 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AW19_3036 PF02350 UDP-N-acetylglucosamine 2-epimerase AW19_3037 PF02706 Chain length determinant protein AW19_3038 PF00953 Glycosyl transferase family 4 AW19_3039 PF07497 Rho termination factor, RNA-binding domain AW19_3039 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AW19_3039 PF07498 Rho termination factor, N-terminal domain AW19_304 PF00528 Binding-protein-dependent transport system inner membrane component AW19_3040 PF00085 Thioredoxin AW19_3041 PF00271 Helicase conserved C-terminal domain AW19_3041 PF00270 DEAD/DEAH box helicase AW19_3042 PF02541 Ppx/GppA phosphatase family AW19_3043 PF00580 UvrD/REP helicase N-terminal domain AW19_3043 PF13361 UvrD-like helicase C-terminal domain AW19_3046 PF02753 Pili assembly chaperone PapD, C-terminal domain AW19_3046 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AW19_3047 PF00577 Outer membrane usher protein AW19_3047 PF13953 PapC C-terminal domain AW19_3047 PF13954 PapC N-terminal domain AW19_3049 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AW19_3049 PF02753 Pili assembly chaperone PapD, C-terminal domain AW19_305 PF00528 Binding-protein-dependent transport system inner membrane component AW19_3051 PF01320 Colicin immunity protein / pyocin immunity protein AW19_3052 PF01320 Colicin immunity protein / pyocin immunity protein AW19_3053 PF01320 Colicin immunity protein / pyocin immunity protein AW19_3055 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AW19_3055 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AW19_3056 PF03466 LysR substrate binding domain AW19_3056 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_3057 PF00291 Pyridoxal-phosphate dependent enzyme AW19_3057 PF00585 C-terminal regulatory domain of Threonine dehydratase AW19_3058 PF00920 Dehydratase family AW19_3059 PF01063 Amino-transferase class IV AW19_306 PF00005 ABC transporter AW19_3061 PF00205 Thiamine pyrophosphate enzyme, central domain AW19_3061 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AW19_3061 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AW19_3062 PF01078 Magnesium chelatase, subunit ChlI AW19_3062 PF13335 Magnesium chelatase, subunit ChlI C-terminal AW19_3063 PF04219 Protein of unknown function, DUF AW19_3064 PF03466 LysR substrate binding domain AW19_3064 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_3072 PF01177 Asp/Glu/Hydantoin racemase AW19_3073 PF00593 TonB dependent receptor AW19_3073 PF07715 TonB-dependent Receptor Plug Domain AW19_3074 PF05958 tRNA (Uracil-5-)-methyltransferase AW19_3075 PF07226 Protein of unknown function (DUF1422) AW19_3076 PF00440 Bacterial regulatory proteins, tetR family AW19_3077 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_3077 PF03466 LysR substrate binding domain AW19_3078 PF07992 Pyridine nucleotide-disulphide oxidoreductase AW19_3078 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AW19_3079 PF00462 Glutaredoxin AW19_3079 PF08534 Redoxin AW19_308 PF13302 Acetyltransferase (GNAT) domain AW19_3080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AW19_3080 PF07992 Pyridine nucleotide-disulphide oxidoreductase AW19_3082 PF00529 HlyD membrane-fusion protein of T1SS AW19_3083 PF00005 ABC transporter AW19_3083 PF00664 ABC transporter transmembrane region AW19_3088 PF07715 TonB-dependent Receptor Plug Domain AW19_3088 PF00593 TonB dependent receptor AW19_3089 PF14698 Argininosuccinate lyase C-terminal AW19_3089 PF00206 Lyase AW19_309 PF00551 Formyl transferase AW19_3090 PF00696 Amino acid kinase family AW19_3091 PF02774 Semialdehyde dehydrogenase, dimerisation domain AW19_3091 PF01118 Semialdehyde dehydrogenase, NAD binding domain AW19_3092 PF01546 Peptidase family M20/M25/M40 AW19_3092 PF07687 Peptidase dimerisation domain AW19_3093 PF00311 Phosphoenolpyruvate carboxylase AW19_3094 PF02219 Methylenetetrahydrofolate reductase AW19_3095 PF03447 Homoserine dehydrogenase, NAD binding domain AW19_3095 PF00696 Amino acid kinase family AW19_3095 PF00742 Homoserine dehydrogenase AW19_3096 PF01053 Cys/Met metabolism PLP-dependent enzyme AW19_3097 PF01340 Met Apo-repressor, MetJ AW19_3098 PF01197 Ribosomal protein L31 AW19_3099 PF00270 DEAD/DEAH box helicase AW19_3099 PF17764 3′ DNA-binding domain (3′BD) AW19_3099 PF18074 Primosomal protein N C-terminal domain AW19_3099 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AW19_3099 PF00271 Helicase conserved C-terminal domain AW19_31 PF07690 Major Facilitator Superfamily AW19_310 PF00586 AIR synthase related protein, N-terminal domain AW19_310 PF02769 AIR synthase related protein, C-terminal domain AW19_3100 PF00356 Bacterial regulatory proteins, lacI family AW19_3101 PF05036 Sporulation related domain AW19_3102 PF00227 Proteasome subunit AW19_3103 PF00004 ATPase family associated with various cellular activities (AAA) AW19_3103 PF07724 AAA domain (Cdc48 subfamily) AW19_3103 PF10431 C-terminal, D2-small domain, of ClpB protein AW19_3104 PF01040 UbiA prenyltransferase family AW19_3105 PF03737 Aldolase/RraA AW19_3106 PF06005 Cell division protein ZapB AW19_3107 PF00230 Major intrinsic protein AW19_3108 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AW19_3108 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AW19_3109 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AW19_3110 PF07690 Major Facilitator Superfamily AW19_3111 PF00175 Oxidoreductase NAD-binding domain AW19_3111 PF00970 Oxidoreductase FAD-binding domain AW19_3112 PF05656 Protein of unknown function (DUF805) AW19_3113 PF07305 Protein of unknown function (DUF1454) AW19_3114 PF00121 Triosephosphate isomerase AW19_3117 PF00365 Phosphofructokinase AW19_3118 PF01545 Cation efflux family AW19_3118 PF16916 Dimerisation domain of Zinc Transporter AW19_3119 PF07813 LTXXQ motif family protein AW19_312 PF00860 Permease family AW19_3120 PF00486 Transcriptional regulatory protein, C terminal AW19_3120 PF00072 Response regulator receiver domain AW19_3121 PF16527 Two-component sensor protein CpxA, periplasmic domain AW19_3121 PF00672 HAMP domain AW19_3121 PF00512 His Kinase A (phospho-acceptor) domain AW19_3121 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_3122 PF12833 Helix-turn-helix domain AW19_3122 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AW19_3122 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AW19_3122 PF02805 Metal binding domain of Ada AW19_3123 PF00588 SpoU rRNA Methylase family AW19_3124 PF00132 Bacterial transferase hexapeptide (six repeats) AW19_3124 PF06426 Serine acetyltransferase, N-terminal AW19_3125 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AW19_3125 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AW19_3126 PF02556 Preprotein translocase subunit SecB AW19_3127 PF00462 Glutaredoxin AW19_3128 PF00581 Rhodanese-like domain AW19_3129 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AW19_3129 PF01676 Metalloenzyme superfamily AW19_313 PF00308 Bacterial dnaA protein AW19_3130 PF01551 Peptidase family M23 AW19_3131 PF04748 Divergent polysaccharide deacetylase AW19_3132 PF08240 Alcohol dehydrogenase GroES-like domain AW19_3132 PF00107 Zinc-binding dehydrogenase AW19_3133 PF00155 Aminotransferase class I and II AW19_3134 PF01370 NAD dependent epimerase/dehydratase family AW19_3135 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AW19_3136 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AW19_3137 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AW19_3138 PF00535 Glycosyl transferase family 2 AW19_3139 PF01467 Cytidylyltransferase-like AW19_314 PF03960 ArsC family AW19_3140 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AW19_3140 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AW19_3140 PF06827 Zinc finger found in FPG and IleRS AW19_3141 PF00471 Ribosomal protein L33 AW19_3142 PF00830 Ribosomal L28 family AW19_3143 PF04002 RadC-like JAB domain AW19_3144 PF02441 Flavoprotein AW19_3144 PF04127 DNA / pantothenate metabolism flavoprotein AW19_3145 PF00692 dUTPase AW19_3146 PF00440 Bacterial regulatory proteins, tetR family AW19_3147 PF00156 Phosphoribosyl transferase domain AW19_3148 PF02899 Phage integrase, N-terminal SAM-like domain AW19_3148 PF00589 Phage integrase family AW19_315 PF01435 Peptidase family M48 AW19_315 PF07720 Tetratricopeptide repeat AW19_3158 PF00929 Exonuclease AW19_3159 PF02086 D12 class N6 adenine-specific DNA methyltransferase AW19_316 PF01594 AI-2E family transporter AW19_3162 PF05840 Bacteriophage replication gene A protein (GPA) AW19_317 PF00578 AhpC/TSA family AW19_318 PF01842 ACT domain AW19_3185 PF04984 Phage tail sheath protein subtilisin-like domain AW19_3185 PF17482 Phage tail sheath C-terminal domain AW19_319 PF00701 Dihydrodipicolinate synthetase family AW19_3191 PF04606 Ogr/Delta-like zinc finger AW19_3193 PF01138 3' exoribonuclease family, domain 1 AW19_3193 PF03725 3' exoribonuclease family, domain 2 AW19_3194 PF08340 Domain of unknown function (DUF1732) AW19_3194 PF03755 YicC-like family, N-terminal region AW19_32 PF02464 Competence-damaged protein AW19_320 PF06804 NlpB/DapX lipoprotein AW19_3200 PF13426 PAS domain AW19_3200 PF00563 EAL domain AW19_3200 PF00990 Diguanylate cyclase, GGDEF domain AW19_3201 PF00378 Enoyl-CoA hydratase/isomerase AW19_3202 PF07670 Nucleoside recognition AW19_3202 PF01773 Na+ dependent nucleoside transporter N-terminus AW19_3202 PF07662 Na+ dependent nucleoside transporter C-terminus AW19_3203 PF01773 Na+ dependent nucleoside transporter N-terminus AW19_3203 PF07662 Na+ dependent nucleoside transporter C-terminus AW19_3203 PF07670 Nucleoside recognition AW19_3204 PF03458 UPF0126 domain AW19_3205 PF01653 NAD-dependent DNA ligase adenylation domain AW19_3205 PF03120 NAD-dependent DNA ligase OB-fold domain AW19_3206 PF00625 Guanylate kinase AW19_3207 PF01192 RNA polymerase Rpb6 AW19_3208 PF02824 TGS domain AW19_3208 PF04607 Region found in RelA / SpoT proteins AW19_3208 PF13291 ACT domain AW19_3209 PF12105 SpoU, rRNA methylase, C-terminal AW19_3209 PF00588 SpoU rRNA Methylase family AW19_321 PF01259 SAICAR synthetase AW19_3210 PF17191 RecG wedge domain AW19_3210 PF00271 Helicase conserved C-terminal domain AW19_3210 PF00270 DEAD/DEAH box helicase AW19_3211 PF03616 Sodium/glutamate symporter AW19_3212 PF00860 Permease family AW19_3213 PF05170 AsmA family AW19_3215 PF00072 Response regulator receiver domain AW19_3215 PF00196 Bacterial regulatory proteins, luxR family AW19_3216 PF13693 Winged helix-turn-helix DNA-binding AW19_3217 PF00583 Acetyltransferase (GNAT) family AW19_3217 PF09500 Putative thioesterase (yiiD_Cterm) AW19_3218 PF02580 D-Tyr-tRNA(Tyr) deacylase AW19_3219 PF03631 Virulence factor BrkB AW19_322 PF04228 Putative neutral zinc metallopeptidase AW19_3220 PF13419 Haloacid dehalogenase-like hydrolase AW19_3222 PF00120 Glutamine synthetase, catalytic domain AW19_3222 PF03951 Glutamine synthetase, beta-Grasp domain AW19_3223 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_3223 PF00512 His Kinase A (phospho-acceptor) domain AW19_3223 PF00989 PAS fold AW19_3224 PF00158 Sigma-54 interaction domain AW19_3224 PF02954 Bacterial regulatory protein, Fis family AW19_3224 PF00072 Response regulator receiver domain AW19_3225 PF04055 Radical SAM superfamily AW19_3225 PF06969 HemN C-terminal domain AW19_3226 PF04220 Der GTPase activator (YihI) AW19_3227 PF01926 50S ribosome-binding GTPase AW19_3228 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AW19_3228 PF00476 DNA polymerase family A AW19_3228 PF01367 5'-3' exonuclease, C-terminal SAM fold AW19_3228 PF01612 3'-5' exonuclease AW19_3229 PF01323 DSBA-like thioredoxin domain AW19_323 PF04284 Protein of unknown function (DUF441) AW19_3230 PF01636 Phosphotransferase enzyme family AW19_3231 PF06288 Protein of unknown function (DUF1040) AW19_3232 PF12804 MobA-like NTP transferase domain AW19_3233 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AW19_324 PF13718 GNAT acetyltransferase 2 AW19_324 PF17176 tRNA-binding domain AW19_324 PF05127 Helicase AW19_3240 PF07729 FCD domain AW19_3240 PF00392 Bacterial regulatory proteins, gntR family AW19_3241 PF00356 Bacterial regulatory proteins, lacI family AW19_3242 PF07690 Major Facilitator Superfamily AW19_3243 PF00294 pfkB family carbohydrate kinase AW19_3244 PF13407 Periplasmic binding protein domain AW19_3245 PF02653 Branched-chain amino acid transport system / permease component AW19_3246 PF00005 ABC transporter AW19_3247 PF05025 RbsD / FucU transport protein family AW19_3248 PF02705 K+ potassium transporter AW19_3249 PF07728 AAA domain (dynein-related subfamily) AW19_3249 PF17868 AAA lid domain AW19_3249 PF12592 Protein of unknown function (DUF3763) AW19_325 PF02230 Phospholipase/Carboxylesterase AW19_3250 PF05762 VWA domain containing CoxE-like protein AW19_3252 PF03590 Aspartate-ammonia ligase AW19_3253 PF01037 Lrp/AsnC ligand binding domain AW19_3254 PF00258 Flavodoxin AW19_3255 PF01134 Glucose inhibited division protein A AW19_3255 PF13932 GidA associated domain AW19_3256 PF02527 rRNA small subunit methyltransferase G AW19_3257 PF03899 ATP synthase I chain AW19_3258 PF00119 ATP synthase A chain AW19_3259 PF00137 ATP synthase subunit C AW19_326 PF13980 Uncharacterised protein family (UPF0370) AW19_3260 PF00430 ATP synthase B/B' CF(0) AW19_3261 PF00213 ATP synthase delta (OSCP) subunit AW19_3262 PF00306 ATP synthase alpha/beta chain, C terminal domain AW19_3262 PF02874 ATP synthase alpha/beta family, beta-barrel domain AW19_3262 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AW19_3263 PF00231 ATP synthase AW19_3264 PF02874 ATP synthase alpha/beta family, beta-barrel domain AW19_3264 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AW19_3265 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AW19_3265 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AW19_3266 PF00132 Bacterial transferase hexapeptide (six repeats) AW19_3266 PF12804 MobA-like NTP transferase domain AW19_3267 PF01380 SIS domain AW19_3268 PF01740 STAS domain AW19_3268 PF00916 Sulfate permease family AW19_3269 PF12849 PBP superfamily domain AW19_327 PF02557 D-alanyl-D-alanine carboxypeptidase AW19_3270 PF00528 Binding-protein-dependent transport system inner membrane component AW19_3271 PF00528 Binding-protein-dependent transport system inner membrane component AW19_3272 PF00005 ABC transporter AW19_3273 PF01895 PhoU domain AW19_3275 PF00497 Bacterial extracellular solute-binding proteins, family 3 AW19_3276 PF00528 Binding-protein-dependent transport system inner membrane component AW19_3277 PF13419 Haloacid dehalogenase-like hydrolase AW19_3278 PF00528 Binding-protein-dependent transport system inner membrane component AW19_3279 PF00860 Permease family AW19_328 PF01546 Peptidase family M20/M25/M40 AW19_328 PF07687 Peptidase dimerisation domain AW19_3281 PF00072 Response regulator receiver domain AW19_3281 PF00196 Bacterial regulatory proteins, luxR family AW19_3282 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_3282 PF00989 PAS fold AW19_3282 PF00512 His Kinase A (phospho-acceptor) domain AW19_3283 PF03358 NADPH-dependent FMN reductase AW19_3284 PF02203 Tar ligand binding domain homologue AW19_3284 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AW19_3284 PF00672 HAMP domain AW19_3285 PF00528 Binding-protein-dependent transport system inner membrane component AW19_3286 PF00005 ABC transporter AW19_3286 PF09383 NIL domain AW19_3288 PF07055 Enoyl reductase FAD binding domain AW19_3288 PF12241 Trans-2-enoyl-CoA reductase catalytic region AW19_3288 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AW19_3289 PF10396 GTP-binding protein TrmE N-terminus AW19_3289 PF12631 MnmE helical domain AW19_3289 PF01926 50S ribosome-binding GTPase AW19_329 PF03960 ArsC family AW19_3290 PF02096 60Kd inner membrane protein AW19_3290 PF14849 YidC periplasmic domain AW19_3291 PF01809 Putative membrane protein insertion efficiency factor AW19_3292 PF00825 Ribonuclease P AW19_3293 PF00468 Ribosomal protein L34 AW19_3294 PF11638 DnaA N-terminal domain AW19_3294 PF08299 Bacterial dnaA protein helix-turn-helix AW19_3294 PF00308 Bacterial dnaA protein AW19_3295 PF00712 DNA polymerase III beta subunit, N-terminal domain AW19_3295 PF02767 DNA polymerase III beta subunit, central domain AW19_3295 PF02768 DNA polymerase III beta subunit, C-terminal domain AW19_3296 PF02463 RecF/RecN/SMC N terminal domain AW19_3297 PF00204 DNA gyrase B AW19_3297 PF00986 DNA gyrase B subunit, carboxyl terminus AW19_3297 PF18053 DNA gyrase B subunit insert domain AW19_3297 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_3297 PF01751 Toprim domain AW19_3299 PF02423 Ornithine cyclodeaminase/mu-crystallin family AW19_33 PF00154 recA bacterial DNA recombination protein AW19_3300 PF00291 Pyridoxal-phosphate dependent enzyme AW19_3301 PF08348 YheO-like PAS domain AW19_3301 PF13309 HTH domain AW19_3302 PF12566 Protein of unknown function (DUF3748) AW19_3302 PF07676 WD40-like Beta Propeller Repeat AW19_3303 PF07119 Protein of unknown function (DUF1375) AW19_3304 PF00011 Hsp20/alpha crystallin family AW19_3305 PF00011 Hsp20/alpha crystallin family AW19_3306 PF06826 Predicted Permease Membrane Region AW19_3306 PF02080 TrkA-C domain AW19_3307 PF00155 Aminotransferase class I and II AW19_3308 PF00128 Alpha amylase, catalytic domain AW19_3309 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AW19_3309 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AW19_3310 PF07690 Major Facilitator Superfamily AW19_3314 PF00583 Acetyltransferase (GNAT) family AW19_3315 PF03352 Methyladenine glycosylase AW19_3318 PF02091 Glycyl-tRNA synthetase alpha subunit AW19_3319 PF02092 Glycyl-tRNA synthetase beta subunit AW19_3319 PF05746 DALR anticodon binding domain AW19_3320 PF11254 Protein of unknown function (DUF3053) AW19_3321 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AW19_3321 PF02378 Phosphotransferase system, EIIC AW19_3321 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AW19_3322 PF01232 Mannitol dehydrogenase Rossmann domain AW19_3322 PF08125 Mannitol dehydrogenase C-terminal domain AW19_3324 PF05068 Mannitol repressor AW19_3325 PF00392 Bacterial regulatory proteins, gntR family AW19_3325 PF00155 Aminotransferase class I and II AW19_3326 PF10928 Protein of unknown function (DUF2810) AW19_3327 PF02203 Tar ligand binding domain homologue AW19_3327 PF00672 HAMP domain AW19_3327 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AW19_3328 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AW19_3328 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AW19_3329 PF02634 FdhD/NarQ family AW19_3330 PF01568 Molydopterin dinucleotide binding domain AW19_3330 PF00384 Molybdopterin oxidoreductase AW19_3330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AW19_3331 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AW19_3331 PF01568 Molydopterin dinucleotide binding domain AW19_3331 PF00384 Molybdopterin oxidoreductase AW19_3332 PF09163 Formate dehydrogenase N, transmembrane AW19_3332 PF13247 4Fe-4S dicluster domain AW19_3333 PF01292 Prokaryotic cytochrome b561 AW19_3334 PF04216 Protein involved in formate dehydrogenase formation AW19_3335 PF12390 Selenocysteine synthase N terminal AW19_3335 PF03841 L-seryl-tRNA selenium transferase AW19_3336 PF09106 Elongation factor SelB, winged helix AW19_3336 PF03144 Elongation factor Tu domain 2 AW19_3336 PF00009 Elongation factor Tu GTP binding domain AW19_3336 PF09107 Elongation factor SelB, winged helix AW19_3339 PF07690 Major Facilitator Superfamily AW19_3340 PF13657 HipA N-terminal domain AW19_3340 PF07804 HipA-like C-terminal domain AW19_3341 PF12833 Helix-turn-helix domain AW19_3341 PF01965 DJ-1/PfpI family AW19_3342 PF01757 Acyltransferase family AW19_3343 PF00857 Isochorismatase family AW19_3344 PF02753 Pili assembly chaperone PapD, C-terminal domain AW19_3344 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AW19_3345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AW19_3345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AW19_3347 PF13407 Periplasmic binding protein domain AW19_3348 PF00005 ABC transporter AW19_3349 PF02653 Branched-chain amino acid transport system / permease component AW19_335 PF08402 TOBE domain AW19_335 PF00005 ABC transporter AW19_3350 PF12833 Helix-turn-helix domain AW19_3352 PF00072 Response regulator receiver domain AW19_3352 PF00497 Bacterial extracellular solute-binding proteins, family 3 AW19_3352 PF00989 PAS fold AW19_3352 PF01627 Hpt domain AW19_3352 PF00512 His Kinase A (phospho-acceptor) domain AW19_3352 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_3353 PF00072 Response regulator receiver domain AW19_3357 PF17391 Urocanase N-terminal domain AW19_3357 PF01175 Urocanase Rossmann-like domain AW19_3357 PF17392 Urocanase C-terminal domain AW19_3358 PF00221 Aromatic amino acid lyase AW19_3359 PF00324 Amino acid permease AW19_336 PF00873 AcrB/AcrD/AcrF family AW19_3361 PF12146 Serine aminopeptidase, S33 AW19_3362 PF02566 OsmC-like protein AW19_3363 PF08019 Phosphoethanolamine transferase EptA/EptB AW19_3363 PF00884 Sulfatase AW19_3364 PF00196 Bacterial regulatory proteins, luxR family AW19_3364 PF00072 Response regulator receiver domain AW19_3365 PF05231 MASE1 AW19_3365 PF07730 Histidine kinase AW19_3365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_3366 PF07690 Major Facilitator Superfamily AW19_3369 PF03543 Yersinia/Haemophilus virulence surface antigen AW19_3369 PF05860 haemagglutination activity domain AW19_3369 PF13332 Hemagglutinin repeat AW19_3369 PF02661 Fic/DOC family AW19_3369 PF13018 Extended Signal Peptide of Type V secretion system AW19_3370 PF17287 POTRA domain AW19_3370 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AW19_3370 PF08479 POTRA domain, ShlB-type AW19_3371 PF13332 Hemagglutinin repeat AW19_3371 PF04829 Pre-toxin domain with VENN motif AW19_3371 PF05860 haemagglutination activity domain AW19_3371 PF13018 Extended Signal Peptide of Type V secretion system AW19_3372 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AW19_3373 PF00528 Binding-protein-dependent transport system inner membrane component AW19_3374 PF12911 N-terminal TM domain of oligopeptide transport permease C AW19_3374 PF00528 Binding-protein-dependent transport system inner membrane component AW19_3375 PF00005 ABC transporter AW19_3375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AW19_3376 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AW19_3376 PF00005 ABC transporter AW19_3377 PF11658 Cellulose biosynthesis protein BcsG AW19_3378 PF11120 Cellulose biosynthesis protein BcsF AW19_3379 PF10995 Cellulose biosynthesis GIL AW19_338 PF00196 Bacterial regulatory proteins, luxR family AW19_338 PF00072 Response regulator receiver domain AW19_3381 PF06564 Cellulose biosynthesis protein BcsQ AW19_3382 PF07238 PilZ domain AW19_3382 PF00535 Glycosyl transferase family 2 AW19_3382 PF03552 Cellulose synthase AW19_3383 PF03170 Bacterial cellulose synthase subunit AW19_3384 PF01270 Glycosyl hydrolases family 8 AW19_3385 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AW19_3386 PF17154 Gammaproteobacterial periplasmic sensor domain AW19_3386 PF00563 EAL domain AW19_3386 PF00672 HAMP domain AW19_3386 PF00990 Diguanylate cyclase, GGDEF domain AW19_3387 PF06178 Oligogalacturonate-specific porin protein (KdgM) AW19_3388 PF06917 Periplasmic pectate lyase AW19_3389 PF00375 Sodium:dicarboxylate symporter family AW19_3390 PF00675 Insulinase (Peptidase family M16) AW19_3390 PF05193 Peptidase M16 inactive domain AW19_3391 PF00294 pfkB family carbohydrate kinase AW19_3392 PF01361 Tautomerase enzyme AW19_3393 PF00563 EAL domain AW19_3394 PF05170 AsmA family AW19_3395 PF02611 CDP-diacylglycerol pyrophosphatase AW19_3396 PF03631 Virulence factor BrkB AW19_3398 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AW19_3398 PF07992 Pyridine nucleotide-disulphide oxidoreductase AW19_3399 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AW19_34 PF02631 RecX family AW19_340 PF03927 NapD protein AW19_3400 PF01432 Peptidase family M3 AW19_3401 PF04445 Putative SAM-dependent methyltransferase AW19_3402 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AW19_3402 PF08548 Peptidase M10 serralysin C terminal AW19_3402 PF00413 Matrixin AW19_3403 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AW19_3403 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AW19_3405 PF00582 Universal stress protein family AW19_3406 PF10625 Universal stress protein B (UspB) AW19_3407 PF01384 Phosphate transporter family AW19_341 PF00384 Molybdopterin oxidoreductase AW19_341 PF01568 Molydopterin dinucleotide binding domain AW19_341 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AW19_341 PF10518 TAT (twin-arginine translocation) pathway signal sequence AW19_3413 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AW19_3413 PF02753 Pili assembly chaperone PapD, C-terminal domain AW19_3414 PF13953 PapC C-terminal domain AW19_3414 PF13954 PapC N-terminal domain AW19_3414 PF00577 Outer membrane usher protein AW19_3415 PF16970 Type-1 fimbrial protein, A AW19_3418 PF00005 ABC transporter AW19_3418 PF16326 ABC transporter C-terminal domain AW19_3418 PF12848 ABC transporter AW19_342 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AW19_3420 PF00171 Aldehyde dehydrogenase family AW19_3421 PF04962 KduI/IolB family AW19_3423 PF00294 pfkB family carbohydrate kinase AW19_3424 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AW19_3424 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AW19_3424 PF00205 Thiamine pyrophosphate enzyme, central domain AW19_3425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AW19_3425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AW19_3426 PF01261 Xylose isomerase-like TIM barrel AW19_3427 PF01261 Xylose isomerase-like TIM barrel AW19_3428 PF00583 Acetyltransferase (GNAT) family AW19_3429 PF02678 Pirin AW19_3429 PF17954 Quercetinase C-terminal cupin domain AW19_343 PF03264 NapC/NirT cytochrome c family, N-terminal region AW19_3430 PF00356 Bacterial regulatory proteins, lacI family AW19_3430 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AW19_3431 PF02447 GntP family permease AW19_3432 PF01202 Shikimate kinase AW19_3433 PF01914 MarC family integral membrane protein AW19_3434 PF02774 Semialdehyde dehydrogenase, dimerisation domain AW19_3434 PF01118 Semialdehyde dehydrogenase, NAD binding domain AW19_3437 PF00535 Glycosyl transferase family 2 AW19_3440 PF00529 HlyD membrane-fusion protein of T1SS AW19_3440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AW19_3441 PF03412 Peptidase C39 family AW19_3441 PF00005 ABC transporter AW19_3441 PF00664 ABC transporter transmembrane region AW19_3442 PF06580 Histidine kinase AW19_3442 PF07694 5TMR of 5TMR-LYT AW19_3443 PF02806 Alpha amylase, C-terminal all-beta domain AW19_3443 PF00128 Alpha amylase, catalytic domain AW19_3443 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AW19_3444 PF18390 Glycogen debranching enzyme C-terminal domain AW19_3444 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AW19_3444 PF00128 Alpha amylase, catalytic domain AW19_3445 PF00483 Nucleotidyl transferase AW19_3446 PF08323 Starch synthase catalytic domain AW19_3446 PF00534 Glycosyl transferases group 1 AW19_3447 PF00343 Carbohydrate phosphorylase AW19_3448 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AW19_3448 PF01266 FAD dependent oxidoreductase AW19_345 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AW19_3451 PF00455 DeoR C terminal sensor domain AW19_3451 PF08220 DeoR-like helix-turn-helix domain AW19_3452 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AW19_3452 PF01694 Rhomboid family AW19_3453 PF00581 Rhodanese-like domain AW19_3454 PF00196 Bacterial regulatory proteins, luxR family AW19_3454 PF17874 MalT-like TPR region AW19_3455 PF00343 Carbohydrate phosphorylase AW19_3456 PF02446 4-alpha-glucanotransferase AW19_3457 PF01521 Iron-sulphur cluster biosynthesis AW19_3457 PF01106 NifU-like domain AW19_3458 PF00156 Phosphoribosyl transferase domain AW19_3459 PF00561 alpha/beta hydrolase fold AW19_346 PF00293 NUDIX domain AW19_3460 PF07338 Protein of unknown function (DUF1471) AW19_3461 PF09012 FeoC like transcriptional regulator AW19_3462 PF07670 Nucleoside recognition AW19_3462 PF02421 Ferrous iron transport protein B AW19_3462 PF17910 FeoB cytosolic helical domain AW19_3462 PF07664 Ferrous iron transport protein B C terminus AW19_3463 PF04023 FeoA domain AW19_3464 PF16921 Tex protein YqgF-like domain AW19_3464 PF17674 HHH domain AW19_3464 PF00575 S1 RNA binding domain AW19_3464 PF09371 Tex-like protein N-terminal domain AW19_3469 PF01272 Transcription elongation factor, GreA/GreB, C-term AW19_3469 PF03449 Transcription elongation factor, N-terminal AW19_347 PF01515 Phosphate acetyl/butaryl transferase AW19_347 PF03949 Malic enzyme, NAD binding domain AW19_347 PF00390 Malic enzyme, N-terminal domain AW19_3470 PF00486 Transcriptional regulatory protein, C terminal AW19_3470 PF00072 Response regulator receiver domain AW19_3471 PF00512 His Kinase A (phospho-acceptor) domain AW19_3471 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_3471 PF00672 HAMP domain AW19_3472 PF01293 Phosphoenolpyruvate carboxykinase AW19_3473 PF01430 Hsp33 protein AW19_3474 PF01479 S4 domain AW19_3475 PF13419 Haloacid dehalogenase-like hydrolase AW19_3476 PF07095 Intracellular growth attenuator protein IgaA AW19_3477 PF00293 NUDIX domain AW19_3478 PF17092 Penicillin-binding protein OB-like domain AW19_3478 PF00912 Transglycosylase AW19_3478 PF00905 Penicillin binding protein transpeptidase domain AW19_348 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AW19_3483 PF00263 Bacterial type II and III secretion system protein AW19_3483 PF03958 Bacterial type II/III secretion system short domain AW19_3484 PF01202 Shikimate kinase AW19_3485 PF01761 3-dehydroquinate synthase AW19_3486 PF05036 Sporulation related domain AW19_3487 PF02086 D12 class N6 adenine-specific DNA methyltransferase AW19_3488 PF00834 Ribulose-phosphate 3 epimerase family AW19_3489 PF13419 Haloacid dehalogenase-like hydrolase AW19_349 PF01218 Coproporphyrinogen III oxidase AW19_3490 PF00579 tRNA synthetases class I (W and Y) AW19_3491 PF14824 Sirohaem biosynthesis protein central AW19_3491 PF10414 Sirohaem synthase dimerisation region AW19_3491 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AW19_3492 PF01226 Formate/nitrite transporter AW19_3493 PF13806 Rieske-like [2Fe-2S] domain AW19_3494 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AW19_3494 PF07992 Pyridine nucleotide-disulphide oxidoreductase AW19_3494 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AW19_3494 PF18267 Rubredoxin NAD+ reductase C-terminal domain AW19_3494 PF04324 BFD-like [2Fe-2S] binding domain AW19_3495 PF07969 Amidohydrolase family AW19_3496 PF07690 Major Facilitator Superfamily AW19_3497 PF00356 Bacterial regulatory proteins, lacI family AW19_3498 PF02056 Family 4 glycosyl hydrolase AW19_3498 PF11975 Family 4 glycosyl hydrolase C-terminal domain AW19_3499 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AW19_35 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AW19_35 PF01411 tRNA synthetases class II (A) AW19_35 PF02272 DHHA1 domain AW19_350 PF00583 Acetyltransferase (GNAT) family AW19_3500 PF05872 Bacterial protein of unknown function (DUF853) AW19_3502 PF00117 Glutamine amidotransferase class-I AW19_3503 PF00202 Aminotransferase class-III AW19_3504 PF12805 FUSC-like inner membrane protein yccS AW19_3505 PF00027 Cyclic nucleotide-binding domain AW19_3505 PF13545 Crp-like helix-turn-helix domain AW19_3506 PF02566 OsmC-like protein AW19_3507 PF00485 Phosphoribulokinase / Uridine kinase family AW19_3508 PF06794 Uncharacterised protein family (UPF0270) AW19_3509 PF00561 alpha/beta hydrolase fold AW19_351 PF04076 Bacterial OB fold (BOF) protein AW19_3510 PF01810 LysE type translocator AW19_3511 PF02567 Phenazine biosynthesis-like protein AW19_3512 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AW19_3513 PF00005 ABC transporter AW19_3514 PF00528 Binding-protein-dependent transport system inner membrane component AW19_3516 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AW19_3518 PF12848 ABC transporter AW19_3518 PF00005 ABC transporter AW19_3519 PF02525 Flavodoxin-like fold AW19_352 PF06572 Protein of unknown function (DUF1131) AW19_3520 PF02254 TrkA-N domain AW19_3520 PF00999 Sodium/hydrogen exchanger family AW19_3521 PF09526 Probable metal-binding protein (DUF2387) AW19_3522 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AW19_3523 PF04102 SlyX AW19_3524 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AW19_3524 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AW19_3525 PF08348 YheO-like PAS domain AW19_3525 PF13309 HTH domain AW19_3526 PF02635 DsrE/DsrF-like family AW19_3527 PF02635 DsrE/DsrF-like family AW19_3528 PF04077 DsrH like protein AW19_3529 PF00164 Ribosomal protein S12/S23 AW19_353 PF04261 Dyp-type peroxidase family AW19_3530 PF00177 Ribosomal protein S7p/S5e AW19_3531 PF00679 Elongation factor G C-terminus AW19_3531 PF03764 Elongation factor G, domain IV AW19_3531 PF00009 Elongation factor Tu GTP binding domain AW19_3531 PF03144 Elongation factor Tu domain 2 AW19_3531 PF14492 Elongation Factor G, domain II AW19_3532 PF00009 Elongation factor Tu GTP binding domain AW19_3532 PF03143 Elongation factor Tu C-terminal domain AW19_3532 PF03144 Elongation factor Tu domain 2 AW19_3533 PF04324 BFD-like [2Fe-2S] binding domain AW19_3534 PF00210 Ferritin-like domain AW19_3535 PF00338 Ribosomal protein S10p/S20e AW19_3536 PF00297 Ribosomal protein L3 AW19_3537 PF00573 Ribosomal protein L4/L1 family AW19_3538 PF00276 Ribosomal protein L23 AW19_3539 PF00181 Ribosomal Proteins L2, RNA binding domain AW19_3539 PF03947 Ribosomal Proteins L2, C-terminal domain AW19_354 PF00701 Dihydrodipicolinate synthetase family AW19_3540 PF00203 Ribosomal protein S19 AW19_3541 PF00237 Ribosomal protein L22p/L17e AW19_3542 PF00189 Ribosomal protein S3, C-terminal domain AW19_3542 PF07650 KH domain AW19_3543 PF00252 Ribosomal protein L16p/L10e AW19_3544 PF00831 Ribosomal L29 protein AW19_3545 PF00366 Ribosomal protein S17 AW19_3546 PF00238 Ribosomal protein L14p/L23e AW19_3547 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AW19_3547 PF00467 KOW motif AW19_3548 PF00673 ribosomal L5P family C-terminus AW19_3548 PF00281 Ribosomal protein L5 AW19_3549 PF00253 Ribosomal protein S14p/S29e AW19_355 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AW19_3550 PF00410 Ribosomal protein S8 AW19_3551 PF00347 Ribosomal protein L6 AW19_3552 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AW19_3553 PF00333 Ribosomal protein S5, N-terminal domain AW19_3553 PF03719 Ribosomal protein S5, C-terminal domain AW19_3554 PF00327 Ribosomal protein L30p/L7e AW19_3555 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AW19_3556 PF00344 SecY translocase AW19_3557 PF00444 Ribosomal protein L36 AW19_3558 PF00416 Ribosomal protein S13/S18 AW19_3559 PF00411 Ribosomal protein S11 AW19_356 PF00480 ROK family AW19_3560 PF01479 S4 domain AW19_3560 PF00163 Ribosomal protein S4/S9 N-terminal domain AW19_3561 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AW19_3561 PF01000 RNA polymerase Rpb3/RpoA insert domain AW19_3561 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AW19_3562 PF01196 Ribosomal protein L17 AW19_3563 PF09350 Domain of unknown function (DUF1992) AW19_3564 PF13411 MerR HTH family regulatory protein AW19_3565 PF03889 Alternative ribosome-rescue factor A AW19_3566 PF01741 Large-conductance mechanosensitive channel, MscL AW19_3567 PF02080 TrkA-C domain AW19_3567 PF02254 TrkA-N domain AW19_3568 PF01189 16S rRNA methyltransferase RsmB/F AW19_3568 PF01029 NusB family AW19_3569 PF00551 Formyl transferase AW19_3569 PF02911 Formyl transferase, C-terminal domain AW19_357 PF04074 YhcH/YjgK/YiaL AW19_3570 PF01327 Polypeptide deformylase AW19_3571 PF17782 DprA winged helix domain AW19_3571 PF02481 DNA recombination-mediator protein A AW19_3572 PF04361 Protein of unknown function (DUF494) AW19_3573 PF01396 Topoisomerase DNA binding C4 zinc finger AW19_3574 PF01300 Telomere recombination AW19_3575 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AW19_3575 PF01488 Shikimate / quinate 5-dehydrogenase AW19_3575 PF08501 Shikimate dehydrogenase substrate binding domain AW19_3576 PF00132 Bacterial transferase hexapeptide (six repeats) AW19_358 PF01418 Helix-turn-helix domain, rpiR family AW19_358 PF01380 SIS domain AW19_3583 PF00474 Sodium:solute symporter family AW19_3584 PF04341 Protein of unknown function, DUF485 AW19_3585 PF16177 Acetyl-coenzyme A synthetase N-terminus AW19_3585 PF00501 AMP-binding enzyme AW19_3585 PF13193 AMP-binding enzyme C-terminal domain AW19_3587 PF00375 Sodium:dicarboxylate symporter family AW19_3588 PF00072 Response regulator receiver domain AW19_3588 PF00196 Bacterial regulatory proteins, luxR family AW19_3589 PF00672 HAMP domain AW19_3589 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_3589 PF00512 His Kinase A (phospho-acceptor) domain AW19_3589 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AW19_3589 PF00072 Response regulator receiver domain AW19_3589 PF01627 Hpt domain AW19_359 PF07690 Major Facilitator Superfamily AW19_3595 PF03433 EspA-like secreted protein AW19_3597 PF04888 Secretion system effector C (SseC) like family AW19_36 PF02599 Global regulator protein family AW19_3602 PF12833 Helix-turn-helix domain AW19_3602 PF14525 AraC-binding-like domain AW19_3606 PF01514 Secretory protein of YscJ/FliF family AW19_3609 PF07201 HrpJ-like domain AW19_361 PF00528 Binding-protein-dependent transport system inner membrane component AW19_3611 PF00771 FHIPEP family AW19_3612 PF18269 T3SS EscN ATPase C-terminal domain AW19_3612 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AW19_3615 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AW19_3616 PF00813 FliP family AW19_3617 PF01313 Bacterial export proteins, family 3 AW19_3618 PF01311 Bacterial export proteins, family 1 AW19_3619 PF01312 FlhB HrpN YscU SpaS Family AW19_362 PF00528 Binding-protein-dependent transport system inner membrane component AW19_3620 PF04143 Sulphur transport AW19_3621 PF01206 Sulfurtransferase TusA AW19_3622 PF00924 Mechanosensitive ion channel AW19_3622 PF12794 Mechanosensitive ion channel inner membrane domain 1 AW19_3622 PF12795 Mechanosensitive ion channel porin domain AW19_3623 PF07715 TonB-dependent Receptor Plug Domain AW19_3623 PF00593 TonB dependent receptor AW19_3625 PF00392 Bacterial regulatory proteins, gntR family AW19_3625 PF00155 Aminotransferase class I and II AW19_3626 PF00005 ABC transporter AW19_3627 PF01032 FecCD transport family AW19_3628 PF01497 Periplasmic binding protein AW19_3629 PF05171 Haemin-degrading HemS.ChuX domain AW19_363 PF00005 ABC transporter AW19_3630 PF00593 TonB dependent receptor AW19_3630 PF07715 TonB-dependent Receptor Plug Domain AW19_3631 PF10636 Hemin uptake protein hemP AW19_3633 PF13614 AAA domain AW19_3634 PF00772 DnaB-like helicase N terminal domain AW19_3634 PF03796 DnaB-like helicase C terminal domain AW19_364 PF00291 Pyridoxal-phosphate dependent enzyme AW19_3642 PF01527 Transposase AW19_3643 PF00665 Integrase core domain AW19_365 PF00072 Response regulator receiver domain AW19_365 PF00486 Transcriptional regulatory protein, C terminal AW19_366 PF00512 His Kinase A (phospho-acceptor) domain AW19_366 PF16527 Two-component sensor protein CpxA, periplasmic domain AW19_366 PF00672 HAMP domain AW19_366 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_367 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AW19_3671 PF02371 Transposase IS116/IS110/IS902 family AW19_3671 PF01548 Transposase AW19_3675 PF00665 Integrase core domain AW19_3675 PF13936 Helix-turn-helix domain AW19_3676 PF00665 Integrase core domain AW19_3676 PF13936 Helix-turn-helix domain AW19_368 PF00391 PEP-utilising enzyme, mobile domain AW19_368 PF05524 PEP-utilising enzyme, N-terminal AW19_368 PF02896 PEP-utilising enzyme, TIM barrel domain AW19_3685 PF01527 Transposase AW19_3686 PF00665 Integrase core domain AW19_3687 PF05973 Phage derived protein Gp49-like (DUF891) AW19_369 PF00381 PTS HPr component phosphorylation site AW19_3697 PF06755 CbtA_toxin of type IV toxin-antitoxin system AW19_3698 PF01223 DNA/RNA non-specific endonuclease AW19_370 PF00291 Pyridoxal-phosphate dependent enzyme AW19_3700 PF13476 AAA domain AW19_3701 PF00580 UvrD/REP helicase N-terminal domain AW19_3701 PF13361 UvrD-like helicase C-terminal domain AW19_3703 PF00665 Integrase core domain AW19_3703 PF13936 Helix-turn-helix domain AW19_3708 PF00589 Phage integrase family AW19_3711 PF03328 HpcH/HpaI aldolase/citrate lyase family AW19_3712 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AW19_3712 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AW19_3714 PF02595 Glycerate kinase family AW19_3715 PF05651 Putative sugar diacid recognition AW19_3715 PF17853 GGDEF-like domain AW19_3715 PF13556 PucR C-terminal helix-turn-helix domain AW19_3716 PF08666 SAF domain AW19_3716 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AW19_3717 PF07690 Major Facilitator Superfamily AW19_3719 PF13247 4Fe-4S dicluster domain AW19_3719 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AW19_3719 PF07992 Pyridine nucleotide-disulphide oxidoreductase AW19_372 PF04354 ZipA, C-terminal FtsZ-binding domain AW19_3720 PF13247 4Fe-4S dicluster domain AW19_3720 PF12800 4Fe-4S binding domain AW19_3721 PF01568 Molydopterin dinucleotide binding domain AW19_3721 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AW19_3721 PF00384 Molybdopterin oxidoreductase AW19_3722 PF02683 Cytochrome C biogenesis protein transmembrane region AW19_3722 PF11412 Disulphide bond corrector protein DsbC AW19_3723 PF03091 CutA1 divalent ion tolerance protein AW19_3724 PF03605 Anaerobic c4-dicarboxylate membrane transporter AW19_3725 PF10415 Fumarase C C-terminus AW19_3725 PF00206 Lyase AW19_3726 PF04186 FxsA cytoplasmic membrane protein AW19_3727 PF00166 Chaperonin 10 Kd subunit AW19_3728 PF00118 TCP-1/cpn60 chaperonin family AW19_3729 PF13698 Domain of unknown function (DUF4156) AW19_373 PF01653 NAD-dependent DNA ligase adenylation domain AW19_373 PF03120 NAD-dependent DNA ligase OB-fold domain AW19_373 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AW19_373 PF12826 Helix-hairpin-helix motif AW19_373 PF00533 BRCA1 C Terminus (BRCT) domain AW19_3730 PF04055 Radical SAM superfamily AW19_3731 PF09285 Elongation factor P, C-terminal AW19_3731 PF08207 Elongation factor P (EF-P) KOW-like domain AW19_3731 PF01132 Elongation factor P (EF-P) OB domain AW19_3732 PF08085 Entericidin EcnA/B family AW19_3733 PF00893 Small Multidrug Resistance protein AW19_3734 PF08212 Lipocalin-like domain AW19_3735 PF02313 Fumarate reductase subunit D AW19_3736 PF02300 Fumarate reductase subunit C AW19_3737 PF13085 2Fe-2S iron-sulfur cluster binding domain AW19_3737 PF13183 4Fe-4S dicluster domain AW19_3738 PF02910 Fumarate reductase flavoprotein C-term AW19_3738 PF00890 FAD binding domain AW19_3739 PF00152 tRNA synthetases class II (D, K and N) AW19_374 PF12843 Putative quorum-sensing-regulated virulence factor AW19_3740 PF12794 Mechanosensitive ion channel inner membrane domain 1 AW19_3740 PF12795 Mechanosensitive ion channel porin domain AW19_3740 PF00924 Mechanosensitive ion channel AW19_3741 PF02666 Phosphatidylserine decarboxylase AW19_3742 PF03193 RsgA GTPase AW19_3743 PF00929 Exonuclease AW19_3747 PF08331 Domain of unknown function (DUF1730) AW19_3748 PF01256 Carbohydrate kinase AW19_3748 PF03853 YjeF-related protein N-terminus AW19_3749 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AW19_3750 PF01520 N-acetylmuramoyl-L-alanine amidase AW19_3751 PF01119 DNA mismatch repair protein, C-terminal domain AW19_3751 PF08676 MutL C terminal dimerisation domain AW19_3753 PF17209 Hfq protein AW19_3754 PF13167 GTP-binding GTPase N-terminal AW19_3754 PF16360 GTP-binding GTPase Middle Region AW19_3754 PF01926 50S ribosome-binding GTPase AW19_3755 PF12221 Bacterial membrane protein N terminal AW19_3755 PF01145 SPFH domain / Band 7 family AW19_3756 PF01145 SPFH domain / Band 7 family AW19_3757 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AW19_3758 PF00709 Adenylosuccinate synthetase AW19_3759 PF02082 Transcriptional regulator AW19_3760 PF17876 Cold shock domain AW19_3760 PF08206 Ribonuclease B OB domain AW19_3760 PF00773 RNB domain AW19_3760 PF00575 S1 RNA binding domain AW19_3760 PF08461 Ribonuclease R winged-helix domain AW19_3761 PF08032 RNA 2'-O ribose methyltransferase substrate binding AW19_3761 PF00588 SpoU rRNA Methylase family AW19_3762 PF18158 Adaptive response protein AidB N-terminal domain AW19_3762 PF02770 Acyl-CoA dehydrogenase, middle domain AW19_3762 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AW19_3763 PF07338 Protein of unknown function (DUF1471) AW19_3764 PF00326 Prolyl oligopeptidase family AW19_3766 PF01250 Ribosomal protein S6 AW19_3767 PF00436 Single-strand binding protein family AW19_3768 PF01084 Ribosomal protein S18 AW19_3769 PF03948 Ribosomal protein L9, C-terminal domain AW19_3769 PF01281 Ribosomal protein L9, N-terminal domain AW19_3771 PF04225 Opacity-associated protein A LysM-like domain AW19_3771 PF08525 Opacity-associated protein A N-terminal motif AW19_3772 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AW19_3772 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AW19_3773 PF04405 Domain of Unknown function (DUF542) AW19_3773 PF01814 Hemerythrin HHE cation binding domain AW19_3774 PF02872 5'-nucleotidase, C-terminal domain AW19_3774 PF00149 Calcineurin-like phosphoesterase AW19_3775 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AW19_3776 PF00459 Inositol monophosphatase family AW19_3777 PF06526 Protein of unknown function (DUF1107) AW19_3778 PF00571 CBS domain AW19_3778 PF03471 Transporter associated domain AW19_3778 PF01595 Cyclin M transmembrane N-terminal domain AW19_3779 PF01625 Peptide methionine sulfoxide reductase AW19_3780 PF07244 Surface antigen variable number repeat AW19_3780 PF01103 Surface antigen AW19_3780 PF17243 POTRA domain TamA domain 1 AW19_3781 PF04357 TamB, inner membrane protein subunit of TAM complex AW19_3782 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AW19_3783 PF00719 Inorganic pyrophosphatase AW19_3784 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AW19_3784 PF02203 Tar ligand binding domain homologue AW19_3784 PF00672 HAMP domain AW19_3785 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AW19_3786 PF02875 Mur ligase family, glutamate ligase domain AW19_3786 PF01225 Mur ligase family, catalytic domain AW19_3786 PF08245 Mur ligase middle domain AW19_3788 PF07338 Protein of unknown function (DUF1471) AW19_3789 PF02863 Arginine repressor, C-terminal domain AW19_3789 PF01316 Arginine repressor, DNA binding domain AW19_3790 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AW19_3790 PF00056 lactate/malate dehydrogenase, NAD binding domain AW19_3791 PF13693 Winged helix-turn-helix DNA-binding AW19_3793 PF00348 Polyprenyl synthetase AW19_3794 PF00829 Ribosomal prokaryotic L21 protein AW19_3795 PF01016 Ribosomal L27 protein AW19_3796 PF00892 EamA-like transporter family AW19_3797 PF01018 GTP1/OBG AW19_3797 PF01926 50S ribosome-binding GTPase AW19_3798 PF00512 His Kinase A (phospho-acceptor) domain AW19_3798 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_3798 PF00672 HAMP domain AW19_3799 PF00072 Response regulator receiver domain AW19_3799 PF00486 Transcriptional regulatory protein, C terminal AW19_380 PF00749 tRNA synthetases class I (E and Q), catalytic domain AW19_3800 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AW19_3801 PF03449 Transcription elongation factor, N-terminal AW19_3801 PF01272 Transcription elongation factor, GreA/GreB, C-term AW19_3802 PF01985 CRS1 / YhbY (CRM) domain AW19_3803 PF01728 FtsJ-like methyltransferase AW19_3804 PF01434 Peptidase family M41 AW19_3804 PF00004 ATPase family associated with various cellular activities (AAA) AW19_3804 PF17862 AAA+ lid domain AW19_3804 PF06480 FtsH Extracellular AW19_3805 PF00809 Pterin binding enzyme AW19_3806 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AW19_3806 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AW19_3806 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AW19_3806 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AW19_3807 PF03840 Preprotein translocase SecG subunit AW19_3810 PF17384 RimP C-terminal SH3 domain AW19_3810 PF02576 RimP N-terminal domain AW19_3811 PF13184 NusA-like KH domain AW19_3811 PF08529 NusA N-terminal domain AW19_3811 PF00575 S1 RNA binding domain AW19_3812 PF04760 Translation initiation factor IF-2, N-terminal region AW19_3812 PF08364 Bacterial translation initiation factor IF-2 associated region AW19_3812 PF00009 Elongation factor Tu GTP binding domain AW19_3812 PF11987 Translation-initiation factor 2 AW19_3812 PF03144 Elongation factor Tu domain 2 AW19_3813 PF02033 Ribosome-binding factor A AW19_3814 PF09157 Pseudouridine synthase II TruB, C-terminal AW19_3814 PF16198 tRNA pseudouridylate synthase B C-terminal domain AW19_3814 PF01509 TruB family pseudouridylate synthase (N terminal domain) AW19_3815 PF00312 Ribosomal protein S15 AW19_3816 PF01138 3' exoribonuclease family, domain 1 AW19_3816 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AW19_3816 PF00013 KH domain AW19_3816 PF03725 3' exoribonuclease family, domain 2 AW19_3816 PF00575 S1 RNA binding domain AW19_3817 PF13181 Tetratricopeptide repeat AW19_3817 PF07719 Tetratricopeptide repeat AW19_3818 PF03880 DbpA RNA binding domain AW19_3818 PF12343 Cold shock protein DEAD box A AW19_3818 PF00270 DEAD/DEAH box helicase AW19_3818 PF00271 Helicase conserved C-terminal domain AW19_3819 PF00296 Luciferase-like monooxygenase AW19_3823 PF01541 GIY-YIG catalytic domain AW19_3824 PF13508 Acetyltransferase (GNAT) domain AW19_3825 PF13520 Amino acid permease AW19_3826 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AW19_3826 PF01276 Orn/Lys/Arg decarboxylase, major domain AW19_3826 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AW19_3829 PF13416 Bacterial extracellular solute-binding protein AW19_3831 PF00528 Binding-protein-dependent transport system inner membrane component AW19_3832 PF00005 ABC transporter AW19_3832 PF03459 TOBE domain AW19_3832 PF17912 MalK OB fold domain AW19_3835 PF13460 NAD(P)H-binding AW19_3836 PF12706 Beta-lactamase superfamily domain AW19_3838 PF07969 Amidohydrolase family AW19_3839 PF00005 ABC transporter AW19_384 PF01773 Na+ dependent nucleoside transporter N-terminus AW19_384 PF07662 Na+ dependent nucleoside transporter C-terminus AW19_384 PF07670 Nucleoside recognition AW19_3840 PF00005 ABC transporter AW19_3841 PF06007 Phosphonate metabolism protein PhnJ AW19_3842 PF05861 Bacterial phosphonate metabolism protein (PhnI) AW19_3843 PF05845 Bacterial phosphonate metabolism protein (PhnH) AW19_3844 PF06754 Phosphonate metabolism protein PhnG AW19_3845 PF07702 UTRA domain AW19_3845 PF00392 Bacterial regulatory proteins, gntR family AW19_3847 PF13597 Anaerobic ribonucleoside-triphosphate reductase AW19_3847 PF03477 ATP cone domain AW19_3848 PF00005 ABC transporter AW19_3848 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AW19_3849 PF00005 ABC transporter AW19_3849 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AW19_3851 PF00528 Binding-protein-dependent transport system inner membrane component AW19_3853 PF04074 YhcH/YjgK/YiaL AW19_3854 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AW19_3854 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AW19_3855 PF06877 Regulator of ribonuclease activity B AW19_3856 PF00583 Acetyltransferase (GNAT) family AW19_3857 PF10458 Valyl tRNA synthetase tRNA binding arm AW19_3857 PF00133 tRNA synthetases class I (I, L, M and V) AW19_3857 PF08264 Anticodon-binding domain of tRNA AW19_3858 PF04364 DNA polymerase III chi subunit, HolC AW19_3859 PF02789 Cytosol aminopeptidase family, N-terminal domain AW19_3859 PF00883 Cytosol aminopeptidase family, catalytic domain AW19_386 PF01566 Natural resistance-associated macrophage protein AW19_3860 PF03739 Lipopolysaccharide export system permease LptF/LptG AW19_3861 PF03739 Lipopolysaccharide export system permease LptF/LptG AW19_3865 PF02384 N-6 DNA Methylase AW19_3867 PF00665 Integrase core domain AW19_3868 PF01527 Transposase AW19_3870 PF13018 Extended Signal Peptide of Type V secretion system AW19_3870 PF13332 Hemagglutinin repeat AW19_3870 PF04829 Pre-toxin domain with VENN motif AW19_3870 PF05860 haemagglutination activity domain AW19_3873 PF04829 Pre-toxin domain with VENN motif AW19_3873 PF05860 haemagglutination activity domain AW19_3873 PF13332 Hemagglutinin repeat AW19_3873 PF13018 Extended Signal Peptide of Type V secretion system AW19_3874 PF08479 POTRA domain, ShlB-type AW19_3874 PF17287 POTRA domain AW19_3874 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AW19_3876 PF00583 Acetyltransferase (GNAT) family AW19_388 PF00248 Aldo/keto reductase family AW19_3881 PF10696 Protein of unknown function (DUF2501) AW19_3882 PF03992 Antibiotic biosynthesis monooxygenase AW19_3883 PF01791 DeoC/LacD family aldolase AW19_3884 PF13407 Periplasmic binding protein domain AW19_3885 PF02653 Branched-chain amino acid transport system / permease component AW19_3886 PF02653 Branched-chain amino acid transport system / permease component AW19_3887 PF00005 ABC transporter AW19_3888 PF04198 Putative sugar-binding domain AW19_3888 PF00325 Bacterial regulatory proteins, crp family AW19_3889 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AW19_3889 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AW19_389 PF03466 LysR substrate binding domain AW19_389 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_3890 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AW19_3892 PF13520 Amino acid permease AW19_3894 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AW19_3895 PF00873 AcrB/AcrD/AcrF family AW19_3896 PF00465 Iron-containing alcohol dehydrogenase AW19_3897 PF02733 Dak1 domain AW19_3898 PF02734 DAK2 domain AW19_3899 PF00391 PEP-utilising enzyme, mobile domain AW19_3899 PF05524 PEP-utilising enzyme, N-terminal AW19_3899 PF03610 PTS system fructose IIA component AW19_3899 PF00381 PTS HPr component phosphorylation site AW19_3901 PF16861 Carbamoyltransferase C-terminus AW19_3901 PF02543 Carbamoyltransferase N-terminus AW19_3906 PF00158 Sigma-54 interaction domain AW19_3906 PF00989 PAS fold AW19_3906 PF02954 Bacterial regulatory protein, Fis family AW19_3907 PF00990 Diguanylate cyclase, GGDEF domain AW19_3908 PF07256 Protein of unknown function (DUF1435) AW19_391 PF02685 Glucokinase AW19_3911 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_3911 PF03466 LysR substrate binding domain AW19_3912 PF00248 Aldo/keto reductase family AW19_3913 PF05175 Methyltransferase small domain AW19_3913 PF08468 Methyltransferase small domain N-terminal AW19_3914 PF03603 DNA polymerase III psi subunit AW19_3915 PF00583 Acetyltransferase (GNAT) family AW19_3916 PF00009 Elongation factor Tu GTP binding domain AW19_3916 PF03144 Elongation factor Tu domain 2 AW19_3916 PF16658 Class II release factor RF3, C-terminal domain AW19_3917 PF04972 BON domain AW19_3918 PF07043 Protein of unknown function (DUF1328) AW19_3919 PF01734 Patatin-like phospholipase AW19_392 PF07690 Major Facilitator Superfamily AW19_3920 PF01026 TatD related DNase AW19_3921 PF07670 Nucleoside recognition AW19_3921 PF01773 Na+ dependent nucleoside transporter N-terminus AW19_3921 PF07662 Na+ dependent nucleoside transporter C-terminus AW19_3922 PF01791 DeoC/LacD family aldolase AW19_3923 PF02885 Glycosyl transferase family, helical bundle domain AW19_3923 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AW19_3923 PF00591 Glycosyl transferase family, a/b domain AW19_3924 PF01676 Metalloenzyme superfamily AW19_3925 PF01048 Phosphorylase superfamily AW19_3926 PF10144 Bacterial virulence factor haemolysin AW19_3927 PF18429 Domain of unknown function (DUF5609) AW19_3928 PF18073 Rubredoxin metal binding domain AW19_393 PF04397 LytTr DNA-binding domain AW19_393 PF00072 Response regulator receiver domain AW19_3930 PF13521 AAA domain AW19_3930 PF01381 Helix-turn-helix AW19_3931 PF00107 Zinc-binding dehydrogenase AW19_3931 PF08240 Alcohol dehydrogenase GroES-like domain AW19_3932 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_3932 PF03466 LysR substrate binding domain AW19_3933 PF12848 ABC transporter AW19_3933 PF00005 ABC transporter AW19_3934 PF00690 Cation transporter/ATPase, N-terminus AW19_3934 PF00689 Cation transporting ATPase, C-terminus AW19_3935 PF14718 Soluble lytic murein transglycosylase L domain AW19_3935 PF01464 Transglycosylase SLT domain AW19_3936 PF01371 Trp repressor protein AW19_3937 PF01931 Protein of unknown function DUF84 AW19_3938 PF06445 GyrI-like small molecule binding domain AW19_3938 PF12833 Helix-turn-helix domain AW19_3939 PF00300 Histidine phosphatase superfamily (branch 1) AW19_394 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_394 PF07694 5TMR of 5TMR-LYT AW19_394 PF06580 Histidine kinase AW19_3940 PF05981 CreA protein AW19_3941 PF00486 Transcriptional regulatory protein, C terminal AW19_3941 PF00072 Response regulator receiver domain AW19_3942 PF00696 Amino acid kinase family AW19_3942 PF01842 ACT domain AW19_3942 PF13840 ACT domain AW19_3942 PF00742 Homoserine dehydrogenase AW19_3942 PF03447 Homoserine dehydrogenase, NAD binding domain AW19_3943 PF00288 GHMP kinases N terminal domain AW19_3943 PF08544 GHMP kinases C terminal AW19_3944 PF14821 Threonine synthase N terminus AW19_3944 PF00291 Pyridoxal-phosphate dependent enzyme AW19_3945 PF03883 Peroxide stress protein YaaA AW19_3946 PF00923 Transaldolase/Fructose-6-phosphate aldolase AW19_3947 PF00994 Probable molybdopterin binding domain AW19_3948 PF07690 Major Facilitator Superfamily AW19_395 PF07350 Protein of unknown function (DUF1479) AW19_3951 PF01184 GPR1/FUN34/yaaH family AW19_3952 PF00012 Hsp70 protein AW19_3953 PF00226 DnaJ domain AW19_3953 PF01556 DnaJ C terminal domain AW19_3953 PF00684 DnaJ central domain AW19_3954 PF06965 Na+/H+ antiporter 1 AW19_3955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_3955 PF03466 LysR substrate binding domain AW19_3956 PF01649 Ribosomal protein S20 AW19_3957 PF01687 Riboflavin kinase AW19_3957 PF06574 FAD synthetase AW19_3958 PF08264 Anticodon-binding domain of tRNA AW19_3958 PF00133 tRNA synthetases class I (I, L, M and V) AW19_3958 PF06827 Zinc finger found in FPG and IleRS AW19_3959 PF01252 Signal peptidase (SPase) II AW19_3960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AW19_3961 PF02401 LytB protein AW19_3962 PF05173 Dihydrodipicolinate reductase, C-terminus AW19_3962 PF01113 Dihydrodipicolinate reductase, N-terminus AW19_3963 PF00117 Glutamine amidotransferase class-I AW19_3963 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AW19_3964 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AW19_3964 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AW19_3964 PF02142 MGS-like domain AW19_3965 PF01810 LysE type translocator AW19_3966 PF06738 Putative threonine/serine exporter AW19_3967 PF12821 Threonine/Serine exporter, ThrE AW19_3968 PF00186 Dihydrofolate reductase AW19_397 PF00155 Aminotransferase class I and II AW19_3971 PF00149 Calcineurin-like phosphoesterase AW19_3972 PF04379 ApaG domain AW19_3973 PF00398 Ribosomal RNA adenine dimethylase AW19_3974 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AW19_3975 PF00639 PPIC-type PPIASE domain AW19_3975 PF09312 SurA N-terminal domain AW19_3976 PF03968 OstA-like protein AW19_3976 PF04453 LPS transport system D AW19_3977 PF05099 Tellurite resistance protein TerB AW19_3977 PF00226 DnaJ domain AW19_3978 PF00849 RNA pseudouridylate synthase AW19_3979 PF18339 RapA N-terminal Tudor like domain 1 AW19_3979 PF18337 RapA N-terminal Tudor like domain AW19_3979 PF00271 Helicase conserved C-terminal domain AW19_3979 PF12137 RNA polymerase recycling family C-terminal AW19_3979 PF00176 SNF2 family N-terminal domain AW19_398 PF01292 Prokaryotic cytochrome b561 AW19_3980 PF03104 DNA polymerase family B, exonuclease domain AW19_3980 PF00136 DNA polymerase family B AW19_3981 PF09335 SNARE associated Golgi protein AW19_3982 PF00005 ABC transporter AW19_3983 PF00528 Binding-protein-dependent transport system inner membrane component AW19_3985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AW19_3985 PF12793 Sugar transport-related sRNA regulator N-term AW19_3986 PF04055 Radical SAM superfamily AW19_3988 PF07690 Major Facilitator Superfamily AW19_3989 PF01212 Beta-eliminating lyase AW19_3991 PF00694 Aconitase C-terminal domain AW19_3992 PF00330 Aconitase family (aconitate hydratase) AW19_3993 PF00180 Isocitrate/isopropylmalate dehydrogenase AW19_3994 PF00682 HMGL-like AW19_3994 PF08502 LeuA allosteric (dimerisation) domain AW19_3996 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_3996 PF03466 LysR substrate binding domain AW19_3997 PF00501 AMP-binding enzyme AW19_3998 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AW19_3998 PF00205 Thiamine pyrophosphate enzyme, central domain AW19_3998 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AW19_3999 PF10369 Small subunit of acetolactate synthase AW19_400 PF03783 Curli production assembly/transport component CsgG AW19_4000 PF00356 Bacterial regulatory proteins, lacI family AW19_4000 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AW19_4001 PF06610 L-alanine exporter AW19_4002 PF02381 MraZ protein, putative antitoxin-like AW19_4003 PF01795 MraW methylase family AW19_4004 PF04999 Cell division protein FtsL AW19_4005 PF00905 Penicillin binding protein transpeptidase domain AW19_4005 PF03717 Penicillin-binding Protein dimerisation domain AW19_4006 PF08245 Mur ligase middle domain AW19_4006 PF01225 Mur ligase family, catalytic domain AW19_4006 PF02875 Mur ligase family, glutamate ligase domain AW19_4007 PF02875 Mur ligase family, glutamate ligase domain AW19_4007 PF08245 Mur ligase middle domain AW19_4007 PF01225 Mur ligase family, catalytic domain AW19_4008 PF00953 Glycosyl transferase family 4 AW19_4008 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AW19_4009 PF08245 Mur ligase middle domain AW19_4009 PF02875 Mur ligase family, glutamate ligase domain AW19_4010 PF01098 Cell cycle protein AW19_4011 PF04101 Glycosyltransferase family 28 C-terminal domain AW19_4011 PF03033 Glycosyltransferase family 28 N-terminal domain AW19_4012 PF01225 Mur ligase family, catalytic domain AW19_4012 PF02875 Mur ligase family, glutamate ligase domain AW19_4012 PF08245 Mur ligase middle domain AW19_4013 PF01820 D-ala D-ala ligase N-terminus AW19_4013 PF07478 D-ala D-ala ligase C-terminus AW19_4014 PF08478 POTRA domain, FtsQ-type AW19_4014 PF03799 Cell division protein FtsQ AW19_4015 PF02491 SHS2 domain inserted in FTSA AW19_4016 PF12327 FtsZ family, C-terminal domain AW19_4016 PF00091 Tubulin/FtsZ family, GTPase domain AW19_4017 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AW19_4019 PF06558 Secretion monitor precursor protein (SecM) AW19_402 PF05643 Putative bacterial lipoprotein (DUF799) AW19_4020 PF02810 SEC-C motif AW19_4020 PF07517 SecA DEAD-like domain AW19_4020 PF07516 SecA Wing and Scaffold domain AW19_4020 PF01043 SecA preprotein cross-linking domain AW19_4021 PF00293 NUDIX domain AW19_4022 PF03884 DNA gyrase inhibitor YacG AW19_4023 PF07072 Cell division protein AW19_4024 PF01121 Dephospho-CoA kinase AW19_4025 PF00478 IMP dehydrogenase / GMP reductase domain AW19_4026 PF00482 Type II secretion system (T2SS), protein F AW19_4027 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AW19_4027 PF00437 Type II/IV secretion system protein AW19_4028 PF07963 Prokaryotic N-terminal methylation motif AW19_4029 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AW19_4029 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AW19_4030 PF01510 N-acetylmuramoyl-L-alanine amidase AW19_4031 PF17113 Regulatory signalling modulator protein AmpE AW19_4032 PF00324 Amino acid permease AW19_4033 PF07729 FCD domain AW19_4033 PF00392 Bacterial regulatory proteins, gntR family AW19_4034 PF00456 Transketolase, thiamine diphosphate binding domain AW19_4034 PF17831 Pyruvate dehydrogenase E1 component middle domain AW19_4035 PF02817 e3 binding domain AW19_4035 PF00364 Biotin-requiring enzyme AW19_4035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AW19_4036 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AW19_4036 PF07992 Pyridine nucleotide-disulphide oxidoreductase AW19_4038 PF01965 DJ-1/PfpI family AW19_4038 PF12833 Helix-turn-helix domain AW19_4039 PF00593 TonB dependent receptor AW19_4039 PF07715 TonB-dependent Receptor Plug Domain AW19_404 PF02613 Nitrate reductase delta subunit AW19_4040 PF11791 Aconitate B N-terminal domain AW19_4040 PF06434 Aconitate hydratase 2 N-terminus AW19_4040 PF00330 Aconitase family (aconitate hydratase) AW19_4042 PF00892 EamA-like transporter family AW19_4043 PF06062 Uncharacterised protein family (UPF0231) AW19_4044 PF15526 Novel toxin 21 AW19_4044 PF04829 Pre-toxin domain with VENN motif AW19_4044 PF05860 haemagglutination activity domain AW19_4044 PF05594 Haemagluttinin repeat AW19_4044 PF13332 Hemagglutinin repeat AW19_4045 PF07262 CDI immunity protein AW19_4046 PF02675 S-adenosylmethionine decarboxylase AW19_4047 PF17284 Spermidine synthase tetramerisation domain AW19_4048 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) AW19_4049 PF07731 Multicopper oxidase AW19_4049 PF00394 Multicopper oxidase AW19_4049 PF10518 TAT (twin-arginine translocation) pathway signal sequence AW19_4049 PF07732 Multicopper oxidase AW19_405 PF04976 DMSO reductase anchor subunit (DmsC) AW19_4051 PF00156 Phosphoribosyl transferase domain AW19_4052 PF00484 Carbonic anhydrase AW19_4053 PF00005 ABC transporter AW19_4054 PF01061 ABC-2 type transporter AW19_4055 PF01522 Polysaccharide deacetylase AW19_4056 PF02261 Aspartate decarboxylase AW19_4057 PF02569 Pantoate-beta-alanine ligase AW19_4058 PF02548 Ketopantoate hydroxymethyltransferase AW19_4059 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AW19_406 PF13247 4Fe-4S dicluster domain AW19_406 PF12800 4Fe-4S binding domain AW19_4060 PF12627 Probable RNA and SrmB- binding site of polymerase A AW19_4060 PF01743 Poly A polymerase head domain AW19_4060 PF12626 Polymerase A arginine-rich C-terminus AW19_4061 PF00749 tRNA synthetases class I (E and Q), catalytic domain AW19_4062 PF01258 Prokaryotic dksA/traR C4-type zinc finger AW19_4063 PF17746 SfsA N-terminal OB domain AW19_4063 PF03749 Sugar fermentation stimulation protein RE domain AW19_4064 PF02834 LigT like Phosphoesterase AW19_4065 PF08482 ATP-dependent helicase C-terminal AW19_4065 PF00271 Helicase conserved C-terminal domain AW19_4065 PF04408 Helicase associated domain (HA2) AW19_4065 PF00270 DEAD/DEAH box helicase AW19_4066 PF00912 Transglycosylase AW19_4066 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal AW19_4066 PF14814 Bifunctional transglycosylase second domain AW19_4066 PF00905 Penicillin binding protein transpeptidase domain AW19_4067 PF00005 ABC transporter AW19_4068 PF01497 Periplasmic binding protein AW19_4069 PF01032 FecCD transport family AW19_407 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AW19_407 PF01568 Molydopterin dinucleotide binding domain AW19_407 PF00384 Molybdopterin oxidoreductase AW19_4070 PF00202 Aminotransferase class-III AW19_4071 PF00654 Voltage gated chloride channel AW19_4072 PF01521 Iron-sulphur cluster biosynthesis AW19_4074 PF03458 UPF0126 domain AW19_4075 PF01497 Periplasmic binding protein AW19_4076 PF01048 Phosphorylase superfamily AW19_4077 PF13286 Phosphohydrolase-associated domain AW19_4077 PF01966 HD domain AW19_4078 PF00595 PDZ domain AW19_4079 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_4079 PF00072 Response regulator receiver domain AW19_4079 PF00672 HAMP domain AW19_4079 PF01627 Hpt domain AW19_4079 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AW19_4079 PF00512 His Kinase A (phospho-acceptor) domain AW19_4080 PF04607 Region found in RelA / SpoT proteins AW19_4080 PF13291 ACT domain AW19_4080 PF02824 TGS domain AW19_4081 PF03819 MazG nucleotide pyrophosphohydrolase domain AW19_4082 PF06418 CTP synthase N-terminus AW19_4082 PF00117 Glutamine amidotransferase class-I AW19_4083 PF03952 Enolase, N-terminal domain AW19_4083 PF00113 Enolase, C-terminal TIM barrel domain AW19_4088 PF00080 Copper/zinc superoxide dismutase (SODC) AW19_4089 PF04055 Radical SAM superfamily AW19_409 PF01810 LysE type translocator AW19_4090 PF01242 6-pyruvoyl tetrahydropterin synthase AW19_4091 PF00258 Flavodoxin AW19_4091 PF00175 Oxidoreductase NAD-binding domain AW19_4091 PF00667 FAD binding domain AW19_4092 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AW19_4092 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AW19_4093 PF01507 Phosphoadenosine phosphosulfate reductase family AW19_4094 PF04389 Peptidase family M28 AW19_4095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AW19_4095 PF10414 Sirohaem synthase dimerisation region AW19_4095 PF14824 Sirohaem biosynthesis protein central AW19_4096 PF01507 Phosphoadenosine phosphosulfate reductase family AW19_4097 PF00009 Elongation factor Tu GTP binding domain AW19_4099 PF12084 Protein of unknown function (DUF3561) AW19_41 PF13419 Haloacid dehalogenase-like hydrolase AW19_410 PF00005 ABC transporter AW19_4100 PF00005 ABC transporter AW19_4101 PF00528 Binding-protein-dependent transport system inner membrane component AW19_4102 PF00497 Bacterial extracellular solute-binding proteins, family 3 AW19_4103 PF04977 Septum formation initiator AW19_4104 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AW19_4105 PF02542 YgbB family AW19_4106 PF01142 tRNA pseudouridine synthase D (TruD) AW19_4107 PF01975 Survival protein SurE AW19_4109 PF01551 Peptidase family M23 AW19_4109 PF01476 LysM domain AW19_411 PF00528 Binding-protein-dependent transport system inner membrane component AW19_4110 PF04545 Sigma-70, region 4 AW19_4110 PF00140 Sigma-70 factor, region 1.2 AW19_4110 PF04542 Sigma-70 region 2 AW19_4110 PF04539 Sigma-70 region 3 AW19_4111 PF00488 MutS domain V AW19_4111 PF05190 MutS family domain IV AW19_4111 PF05192 MutS domain III AW19_4111 PF05188 MutS domain II AW19_4111 PF01624 MutS domain I AW19_4114 PF00419 Fimbrial protein AW19_4115 PF00419 Fimbrial protein AW19_4116 PF00577 Outer membrane usher protein AW19_4116 PF13954 PapC N-terminal domain AW19_4116 PF13953 PapC C-terminal domain AW19_4117 PF02753 Pili assembly chaperone PapD, C-terminal domain AW19_4117 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AW19_4119 PF00419 Fimbrial protein AW19_4120 PF00419 Fimbrial protein AW19_4125 PF00664 ABC transporter transmembrane region AW19_4125 PF00005 ABC transporter AW19_4125 PF03412 Peptidase C39 family AW19_4126 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AW19_4127 PF12704 MacB-like periplasmic core domain AW19_4127 PF02687 FtsX-like permease family AW19_4127 PF00005 ABC transporter AW19_4128 PF02321 Outer membrane efflux protein AW19_4129 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AW19_413 PF13406 Transglycosylase SLT domain AW19_414 PF00324 Amino acid permease AW19_4140 PF01051 Initiator Replication protein AW19_4141 PF01556 DnaJ C terminal domain AW19_4141 PF00684 DnaJ central domain AW19_4141 PF00226 DnaJ domain AW19_4145 PF01381 Helix-turn-helix AW19_4146 PF05973 Phage derived protein Gp49-like (DUF891) AW19_415 PF07969 Amidohydrolase family AW19_4156 PF13614 AAA domain AW19_4167 PF00589 Phage integrase family AW19_417 PF07690 Major Facilitator Superfamily AW19_4173 PF05321 Haemolysin expression modulating protein AW19_4176 PF00816 H-NS histone family AW19_4177 PF01131 DNA topoisomerase AW19_4177 PF01751 Toprim domain AW19_418 PF02405 Permease MlaE AW19_4180 PF04917 Bacterial shufflon protein, N-terminal constant region AW19_4182 PF01464 Transglycosylase SLT domain AW19_4185 PF00437 Type II/IV secretion system protein AW19_4185 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AW19_419 PF00005 ABC transporter AW19_4192 PF02534 Type IV secretory system Conjugative DNA transfer AW19_4194 PF00437 Type II/IV secretion system protein AW19_4195 PF03743 Bacterial conjugation TrbI-like protein AW19_4197 PF04335 VirB8 protein AW19_42 PF09335 SNARE associated Golgi protein AW19_422 PF01292 Prokaryotic cytochrome b561 AW19_423 PF04264 YceI-like domain AW19_424 PF00356 Bacterial regulatory proteins, lacI family AW19_425 PF02378 Phosphotransferase system, EIIC AW19_425 PF00367 phosphotransferase system, EIIB AW19_426 PF00232 Glycosyl hydrolase family 1 AW19_43 PF04262 Glutamate-cysteine ligase AW19_430 PF03831 PhnA domain AW19_430 PF08274 PhnA Zinc-Ribbon AW19_431 PF08007 Cupin superfamily protein AW19_432 PF00664 ABC transporter transmembrane region AW19_432 PF00005 ABC transporter AW19_437 PF00196 Bacterial regulatory proteins, luxR family AW19_438 PF00313 'Cold-shock' DNA-binding domain AW19_439 PF00313 'Cold-shock' DNA-binding domain AW19_44 PF02664 S-Ribosylhomocysteinase (LuxS) AW19_440 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AW19_441 PF05230 MASE2 domain AW19_441 PF00990 Diguanylate cyclase, GGDEF domain AW19_442 PF02416 mttA/Hcf106 family AW19_443 PF04055 Radical SAM superfamily AW19_443 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AW19_444 PF03099 Biotin/lipoate A/B protein ligase family AW19_445 PF04359 Protein of unknown function (DUF493) AW19_446 PF07943 Penicillin-binding protein 5, C-terminal domain AW19_446 PF00768 D-alanyl-D-alanine carboxypeptidase AW19_447 PF03330 Lytic transglycolase AW19_447 PF05036 Sporulation related domain AW19_448 PF01098 Cell cycle protein AW19_449 PF00905 Penicillin binding protein transpeptidase domain AW19_449 PF03717 Penicillin-binding Protein dimerisation domain AW19_45 PF00571 CBS domain AW19_45 PF03471 Transporter associated domain AW19_45 PF01595 Cyclin M transmembrane N-terminal domain AW19_450 PF02590 Predicted SPOUT methyltransferase AW19_452 PF01467 Cytidylyltransferase-like AW19_453 PF06144 DNA polymerase III, delta subunit AW19_453 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AW19_454 PF04390 Lipopolysaccharide-assembly AW19_455 PF08264 Anticodon-binding domain of tRNA AW19_455 PF00133 tRNA synthetases class I (I, L, M and V) AW19_455 PF13603 Leucyl-tRNA synthetase, Domain 2 AW19_456 PF07295 Zinc-ribbon containing domain AW19_457 PF01156 Inosine-uridine preferring nucleoside hydrolase AW19_458 PF00005 ABC transporter AW19_459 PF00528 Binding-protein-dependent transport system inner membrane component AW19_46 PF01578 Cytochrome C assembly protein AW19_460 PF00528 Binding-protein-dependent transport system inner membrane component AW19_461 PF00497 Bacterial extracellular solute-binding proteins, family 3 AW19_463 PF00795 Carbon-nitrogen hydrolase AW19_464 PF03471 Transporter associated domain AW19_464 PF00571 CBS domain AW19_465 PF02130 Uncharacterized protein family UPF0054 AW19_466 PF02562 PhoH-like protein AW19_467 PF04055 Radical SAM superfamily AW19_467 PF00919 Uncharacterized protein family UPF0004 AW19_467 PF01938 TRAM domain AW19_468 PF01494 FAD binding domain AW19_47 PF00448 SRP54-type protein, GTPase domain AW19_47 PF02881 SRP54-type protein, helical bundle domain AW19_47 PF02978 Signal peptide binding domain AW19_474 PF13537 Glutamine amidotransferase domain AW19_474 PF00733 Asparagine synthase AW19_475 PF13344 Haloacid dehalogenase-like hydrolase AW19_476 PF01047 MarR family AW19_476 PF00480 ROK family AW19_477 PF01979 Amidohydrolase family AW19_478 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AW19_479 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AW19_479 PF02378 Phosphotransferase system, EIIC AW19_479 PF00367 phosphotransferase system, EIIB AW19_48 PF00886 Ribosomal protein S16 AW19_480 PF00749 tRNA synthetases class I (E and Q), catalytic domain AW19_480 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AW19_481 PF03573 outer membrane porin, OprD family AW19_482 PF13982 YbfN-like lipoprotein AW19_483 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AW19_483 PF00728 Glycosyl hydrolase family 20, catalytic domain AW19_483 PF03173 Putative carbohydrate binding domain AW19_483 PF02838 Glycosyl hydrolase family 20, domain 2 AW19_484 PF01475 Ferric uptake regulator family AW19_485 PF00258 Flavodoxin AW19_486 PF02203 Tar ligand binding domain homologue AW19_486 PF00672 HAMP domain AW19_486 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AW19_487 PF01402 Ribbon-helix-helix protein, copG family AW19_489 PF12697 Alpha/beta hydrolase family AW19_49 PF01782 RimM N-terminal domain AW19_49 PF05239 PRC-barrel domain AW19_490 PF17206 SeqA protein N-terminal domain AW19_490 PF03925 SeqA protein C-terminal domain AW19_491 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AW19_491 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AW19_491 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AW19_491 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AW19_494 PF00072 Response regulator receiver domain AW19_494 PF00486 Transcriptional regulatory protein, C terminal AW19_495 PF02702 Osmosensitive K+ channel His kinase sensor domain AW19_495 PF13492 GAF domain AW19_495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_495 PF00512 His Kinase A (phospho-acceptor) domain AW19_495 PF13493 Domain of unknown function (DUF4118) AW19_496 PF02669 K+-transporting ATPase, c chain AW19_498 PF03814 Potassium-transporting ATPase A subunit AW19_499 PF10725 Protein of unknown function (DUF2517) AW19_5 PF00497 Bacterial extracellular solute-binding proteins, family 3 AW19_50 PF01746 tRNA (Guanine-1)-methyltransferase AW19_500 PF08349 Protein of unknown function (DUF1722) AW19_501 PF00875 DNA photolyase AW19_501 PF03441 FAD binding domain of DNA photolyase AW19_502 PF02112 cAMP phosphodiesterases class-II AW19_503 PF01784 NIF3 (NGG1p interacting factor 3) AW19_504 PF02682 Carboxyltransferase domain, subdomain C and D AW19_505 PF02626 Carboxyltransferase domain, subdomain A and B AW19_506 PF03746 LamB/YcsF family AW19_509 PF01470 Pyroglutamyl peptidase AW19_51 PF01245 Ribosomal protein L19 AW19_510 PF00285 Citrate synthase, C-terminal domain AW19_511 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AW19_512 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AW19_513 PF02910 Fumarate reductase flavoprotein C-term AW19_513 PF00890 FAD binding domain AW19_514 PF13085 2Fe-2S iron-sulfur cluster binding domain AW19_515 PF02779 Transketolase, pyrimidine binding domain AW19_515 PF16870 2-oxoglutarate dehydrogenase C-terminal AW19_515 PF16078 2-oxoglutarate dehydrogenase N-terminus AW19_515 PF00676 Dehydrogenase E1 component AW19_516 PF02817 e3 binding domain AW19_516 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AW19_516 PF00364 Biotin-requiring enzyme AW19_517 PF08442 ATP-grasp domain AW19_517 PF00549 CoA-ligase AW19_518 PF02629 CoA binding domain AW19_518 PF00549 CoA-ligase AW19_519 PF00149 Calcineurin-like phosphoesterase AW19_519 PF02872 5'-nucleotidase, C-terminal domain AW19_52 PF04338 Protein of unknown function, DUF481 AW19_520 PF01654 Cytochrome bd terminal oxidase subunit I AW19_521 PF02322 Cytochrome bd terminal oxidase subunit II AW19_522 PF08173 Membrane bound YbgT-like protein AW19_523 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AW19_524 PF03061 Thioesterase superfamily AW19_525 PF01618 MotA/TolQ/ExbB proton channel family AW19_526 PF02472 Biopolymer transport protein ExbD/TolR AW19_527 PF06519 TolA C-terminal AW19_527 PF06519 TolA C-terminal AW19_528 PF07676 WD40-like Beta Propeller Repeat AW19_528 PF04052 TolB amino-terminal domain AW19_529 PF00691 OmpA family AW19_53 PF03605 Anaerobic c4-dicarboxylate membrane transporter AW19_530 PF13174 Tetratricopeptide repeat AW19_530 PF16331 TolA binding protein trimerisation AW19_535 PF02445 Quinolinate synthetase A protein AW19_536 PF04973 Nicotinamide mononucleotide transporter AW19_537 PF01545 Cation efflux family AW19_538 PF00793 DAHP synthetase I family AW19_539 PF00300 Histidine phosphatase superfamily (branch 1) AW19_54 PF00072 Response regulator receiver domain AW19_54 PF04397 LytTr DNA-binding domain AW19_541 PF01263 Aldose 1-epimerase AW19_542 PF10509 Galactokinase galactose-binding signature AW19_542 PF00288 GHMP kinases N terminal domain AW19_542 PF08544 GHMP kinases C terminal AW19_543 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AW19_543 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AW19_544 PF16363 GDP-mannose 4,6 dehydratase AW19_546 PF00005 ABC transporter AW19_547 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_547 PF03459 TOBE domain AW19_548 PF10766 Multidrug efflux pump-associated protein AcrZ AW19_55 PF00793 DAHP synthetase I family AW19_550 PF00528 Binding-protein-dependent transport system inner membrane component AW19_551 PF00005 ABC transporter AW19_551 PF03459 TOBE domain AW19_553 PF10282 Lactonase, 7-bladed beta-propeller AW19_554 PF00202 Aminotransferase class-III AW19_555 PF04055 Radical SAM superfamily AW19_555 PF06968 Biotin and Thiamin Synthesis associated domain AW19_556 PF00155 Aminotransferase class I and II AW19_557 PF08241 Methyltransferase domain AW19_559 PF00005 ABC transporter AW19_56 PF02153 Prephenate dehydrogenase AW19_56 PF01817 Chorismate mutase type II AW19_560 PF17757 UvrB interaction domain AW19_560 PF04851 Type III restriction enzyme, res subunit AW19_560 PF12344 Ultra-violet resistance protein B AW19_560 PF02151 UvrB/uvrC motif AW19_560 PF00271 Helicase conserved C-terminal domain AW19_561 PF01933 Uncharacterised protein family UPF0052 AW19_562 PF09905 DNA-binding protein VF530 AW19_563 PF04055 Radical SAM superfamily AW19_563 PF06463 Molybdenum Cofactor Synthesis C AW19_564 PF01967 MoaC family AW19_565 PF02597 ThiS family AW19_566 PF02391 MoaE protein AW19_567 PF01027 Inhibitor of apoptosis-promoting Bax1 AW19_57 PF01817 Chorismate mutase type II AW19_57 PF00800 Prephenate dehydratase AW19_570 PF00005 ABC transporter AW19_571 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AW19_572 PF09209 Tetracyclin repressor-like, C-terminal domain AW19_572 PF00440 Bacterial regulatory proteins, tetR family AW19_573 PF00271 Helicase conserved C-terminal domain AW19_573 PF00270 DEAD/DEAH box helicase AW19_574 PF01207 Dihydrouridine synthase (Dus) AW19_576 PF03448 MgtE intracellular N domain AW19_576 PF01769 Divalent cation transporter AW19_576 PF00571 CBS domain AW19_578 PF00768 D-alanyl-D-alanine carboxypeptidase AW19_579 PF09330 D-lactate dehydrogenase, membrane binding AW19_579 PF01565 FAD binding domain AW19_58 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AW19_580 PF01928 CYTH domain AW19_581 PF01844 HNH endonuclease AW19_583 PF04226 Transglycosylase associated protein AW19_584 PF00005 ABC transporter AW19_586 PF00528 Binding-protein-dependent transport system inner membrane component AW19_587 PF00528 Binding-protein-dependent transport system inner membrane component AW19_588 PF07308 Protein of unknown function (DUF1456) AW19_589 PF00581 Rhodanese-like domain AW19_59 PF13525 Outer membrane lipoprotein AW19_592 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AW19_593 PF00528 Binding-protein-dependent transport system inner membrane component AW19_594 PF00005 ABC transporter AW19_595 PF00528 Binding-protein-dependent transport system inner membrane component AW19_598 PF00892 EamA-like transporter family AW19_6 PF14376 Haem-binding domain AW19_6 PF03150 Di-haem cytochrome c peroxidase AW19_6 PF00034 Cytochrome c AW19_60 PF00849 RNA pseudouridylate synthase AW19_60 PF01479 S4 domain AW19_600 PF00267 Gram-negative porin AW19_601 PF06733 DEAD_2 AW19_601 PF13307 Helicase C-terminal domain AW19_601 PF00270 DEAD/DEAH box helicase AW19_602 PF00230 Major intrinsic protein AW19_603 PF02885 Glycosyl transferase family, helical bundle domain AW19_606 PF05971 RNA methyltransferase AW19_607 PF08447 PAS fold AW19_607 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AW19_607 PF13426 PAS domain AW19_608 PF00005 ABC transporter AW19_609 PF00528 Binding-protein-dependent transport system inner membrane component AW19_610 PF00497 Bacterial extracellular solute-binding proteins, family 3 AW19_611 PF00210 Ferritin-like domain AW19_612 PF13847 Methyltransferase domain AW19_615 PF02469 Fasciclin domain AW19_617 PF00892 EamA-like transporter family AW19_618 PF13505 Outer membrane protein beta-barrel domain AW19_62 PF10431 C-terminal, D2-small domain, of ClpB protein AW19_62 PF02861 Clp amino terminal domain, pathogenicity island component AW19_62 PF17871 AAA lid domain AW19_62 PF07724 AAA domain (Cdc48 subfamily) AW19_62 PF00004 ATPase family associated with various cellular activities (AAA) AW19_620 PF00005 ABC transporter AW19_620 PF12848 ABC transporter AW19_621 PF00899 ThiF family AW19_622 PF03454 MoeA C-terminal region (domain IV) AW19_622 PF03453 MoeA N-terminal region (domain I and II) AW19_622 PF00994 Probable molybdopterin binding domain AW19_624 PF00083 Sugar (and other) transporter AW19_626 PF12704 MacB-like periplasmic core domain AW19_626 PF02687 FtsX-like permease family AW19_626 PF00005 ABC transporter AW19_630 PF00756 Putative esterase AW19_631 PF08240 Alcohol dehydrogenase GroES-like domain AW19_631 PF00107 Zinc-binding dehydrogenase AW19_632 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_632 PF03466 LysR substrate binding domain AW19_633 PF06779 Uncharacterised MFS-type transporter YbfB AW19_634 PF01227 GTP cyclohydrolase I AW19_635 PF04235 Protein of unknown function (DUF418) AW19_636 PF00356 Bacterial regulatory proteins, lacI family AW19_637 PF13407 Periplasmic binding protein domain AW19_638 PF00005 ABC transporter AW19_639 PF02653 Branched-chain amino acid transport system / permease component AW19_640 PF01226 Formate/nitrite transporter AW19_641 PF00158 Sigma-54 interaction domain AW19_641 PF01590 GAF domain AW19_642 PF00384 Molybdopterin oxidoreductase AW19_642 PF01568 Molydopterin dinucleotide binding domain AW19_642 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AW19_643 PF13247 4Fe-4S dicluster domain AW19_643 PF12800 4Fe-4S binding domain AW19_644 PF01750 Hydrogenase maturation protease AW19_645 PF07450 Formate hydrogenlyase maturation protein HycH AW19_646 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AW19_647 PF12838 4Fe-4S dicluster domain AW19_648 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AW19_648 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AW19_648 PF00374 Nickel-dependent hydrogenase AW19_649 PF00361 Proton-conducting membrane transporter AW19_649 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AW19_650 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AW19_651 PF00361 Proton-conducting membrane transporter AW19_651 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AW19_652 PF00146 NADH dehydrogenase AW19_653 PF00361 Proton-conducting membrane transporter AW19_654 PF00037 4Fe-4S binding domain AW19_654 PF12798 4Fe-4S binding domain AW19_655 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AW19_656 PF01455 HupF/HypC family AW19_657 PF02698 DUF218 domain AW19_658 PF03949 Malic enzyme, NAD binding domain AW19_658 PF00390 Malic enzyme, N-terminal domain AW19_660 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AW19_660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AW19_661 PF04172 LrgB-like family AW19_662 PF03788 LrgA family AW19_663 PF07690 Major Facilitator Superfamily AW19_667 PF01588 Putative tRNA binding domain AW19_667 PF09334 tRNA synthetases class I (M) AW19_668 PF10609 NUBPL iron-transfer P-loop NTPase AW19_669 PF00485 Phosphoribulokinase / Uridine kinase family AW19_670 PF00692 dUTPase AW19_671 PF05170 AsmA family AW19_672 PF03606 C4-dicarboxylate anaerobic carrier AW19_673 PF03741 Integral membrane protein TerC family AW19_673 PF00571 CBS domain AW19_673 PF03471 Transporter associated domain AW19_674 PF00483 Nucleotidyl transferase AW19_675 PF00483 Nucleotidyl transferase AW19_676 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AW19_676 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AW19_677 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AW19_677 PF01502 Phosphoribosyl-AMP cyclohydrolase AW19_678 PF00977 Histidine biosynthesis protein AW19_679 PF00977 Histidine biosynthesis protein AW19_680 PF00117 Glutamine amidotransferase class-I AW19_681 PF00475 Imidazoleglycerol-phosphate dehydratase AW19_682 PF00155 Aminotransferase class I and II AW19_683 PF00815 Histidinol dehydrogenase AW19_684 PF08029 HisG, C-terminal domain AW19_684 PF01634 ATP phosphoribosyltransferase AW19_685 PF01370 NAD dependent epimerase/dehydratase family AW19_686 PF02653 Branched-chain amino acid transport system / permease component AW19_687 PF00005 ABC transporter AW19_688 PF00465 Iron-containing alcohol dehydrogenase AW19_69 PF00248 Aldo/keto reductase family AW19_690 PF13520 Amino acid permease AW19_691 PF00929 Exonuclease AW19_691 PF08411 Exonuclease C-terminal AW19_692 PF00550 Phosphopantetheine attachment site AW19_692 PF00501 AMP-binding enzyme AW19_692 PF07993 Male sterility protein AW19_693 PF04632 Fusaric acid resistance protein family AW19_694 PF04363 Protein of unknown function (DUF496) AW19_695 PF02653 Branched-chain amino acid transport system / permease component AW19_696 PF02653 Branched-chain amino acid transport system / permease component AW19_698 PF13407 Periplasmic binding protein domain AW19_699 PF00288 GHMP kinases N terminal domain AW19_70 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_70 PF03466 LysR substrate binding domain AW19_700 PF00155 Aminotransferase class I and II AW19_701 PF10414 Sirohaem synthase dimerisation region AW19_701 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AW19_701 PF14824 Sirohaem biosynthesis protein central AW19_702 PF00871 Acetokinase family AW19_703 PF10662 Ethanolamine utilisation - propanediol utilisation AW19_704 PF00936 BMC domain AW19_706 PF10531 SLBB domain AW19_706 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AW19_706 PF13375 RnfC Barrel sandwich hybrid domain AW19_706 PF13237 4Fe-4S dicluster domain AW19_707 PF00465 Iron-containing alcohol dehydrogenase AW19_708 PF00171 Aldehyde dehydrogenase family AW19_709 PF01923 Cobalamin adenosyltransferase AW19_71 PF07690 Major Facilitator Superfamily AW19_710 PF03319 Ethanolamine utilisation protein EutN/carboxysome AW19_712 PF06130 Phosphate propanoyltransferase AW19_714 PF00936 BMC domain AW19_716 PF08841 Diol dehydratase reactivase ATPase-like domain AW19_716 PF18427 DD-reactivating factor swiveling domain AW19_717 PF02287 Dehydratase small subunit AW19_718 PF02288 Dehydratase medium subunit AW19_719 PF02286 Dehydratase large subunit AW19_720 PF00936 BMC domain AW19_721 PF00936 BMC domain AW19_723 PF00230 Major intrinsic protein AW19_724 PF10114 Sensory domain found in PocR AW19_724 PF12833 Helix-turn-helix domain AW19_725 PF07685 CobB/CobQ-like glutamine amidotransferase domain AW19_725 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AW19_726 PF03186 CobD/Cbib protein AW19_727 PF02570 Precorrin-8X methylmutase AW19_728 PF01888 CbiD AW19_729 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AW19_73 PF03372 Endonuclease/Exonuclease/phosphatase family AW19_730 PF05175 Methyltransferase small domain AW19_731 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AW19_732 PF01890 Cobalamin synthesis G C-terminus AW19_732 PF11761 Cobalamin biosynthesis central region AW19_732 PF11760 Cobalamin synthesis G N-terminal AW19_733 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AW19_734 PF02571 Precorrin-6x reductase CbiJ/CobK AW19_735 PF06180 Cobalt chelatase (CbiK) AW19_736 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AW19_737 PF01891 Cobalt uptake substrate-specific transmembrane region AW19_738 PF02553 Cobalt transport protein component CbiN AW19_739 PF02361 Cobalt transport protein AW19_74 PF01476 LysM domain AW19_74 PF01464 Transglycosylase SLT domain AW19_740 PF00005 ABC transporter AW19_741 PF07685 CobB/CobQ-like glutamine amidotransferase domain AW19_742 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AW19_743 PF02654 Cobalamin-5-phosphate synthase AW19_744 PF00300 Histidine phosphatase superfamily (branch 1) AW19_745 PF02277 Phosphoribosyltransferase AW19_746 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_746 PF03466 LysR substrate binding domain AW19_748 PF01048 Phosphorylase superfamily AW19_749 PF03825 Nucleoside H+ symporter AW19_75 PF00753 Metallo-beta-lactamase superfamily AW19_75 PF16123 Hydroxyacylglutathione hydrolase C-terminus AW19_750 PF00764 Arginosuccinate synthase AW19_751 PF01554 MatE AW19_753 PF02581 Thiamine monophosphate synthase AW19_755 PF00455 DeoR C terminal sensor domain AW19_755 PF08220 DeoR-like helix-turn-helix domain AW19_756 PF07690 Major Facilitator Superfamily AW19_757 PF00144 Beta-lactamase AW19_758 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_758 PF03466 LysR substrate binding domain AW19_759 PF00072 Response regulator receiver domain AW19_759 PF01584 CheW-like domain AW19_76 PF08241 Methyltransferase domain AW19_761 PF02753 Pili assembly chaperone PapD, C-terminal domain AW19_761 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AW19_763 PF00577 Outer membrane usher protein AW19_763 PF13953 PapC C-terminal domain AW19_763 PF13954 PapC N-terminal domain AW19_764 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AW19_764 PF02753 Pili assembly chaperone PapD, C-terminal domain AW19_766 PF00072 Response regulator receiver domain AW19_766 PF01627 Hpt domain AW19_766 PF00989 PAS fold AW19_766 PF00512 His Kinase A (phospho-acceptor) domain AW19_766 PF00497 Bacterial extracellular solute-binding proteins, family 3 AW19_766 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_767 PF00196 Bacterial regulatory proteins, luxR family AW19_767 PF00072 Response regulator receiver domain AW19_768 PF03466 LysR substrate binding domain AW19_768 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_769 PF01042 Endoribonuclease L-PSP AW19_77 PF00075 RNase H AW19_770 PF08240 Alcohol dehydrogenase GroES-like domain AW19_770 PF00698 Acyl transferase domain AW19_770 PF08990 Erythronolide synthase docking AW19_770 PF09277 Erythronolide synthase, docking AW19_770 PF00109 Beta-ketoacyl synthase, N-terminal domain AW19_770 PF02801 Beta-ketoacyl synthase, C-terminal domain AW19_770 PF08659 KR domain AW19_770 PF00550 Phosphopantetheine attachment site AW19_770 PF14765 Polyketide synthase dehydratase AW19_770 PF16197 Ketoacyl-synthetase C-terminal extension AW19_771 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AW19_771 PF01648 4'-phosphopantetheinyl transferase superfamily AW19_773 PF00501 AMP-binding enzyme AW19_773 PF13193 AMP-binding enzyme C-terminal domain AW19_773 PF00668 Condensation domain AW19_773 PF00550 Phosphopantetheine attachment site AW19_774 PF00501 AMP-binding enzyme AW19_774 PF00668 Condensation domain AW19_774 PF08242 Methyltransferase domain AW19_774 PF00550 Phosphopantetheine attachment site AW19_777 PF00975 Thioesterase domain AW19_779 PF13193 AMP-binding enzyme C-terminal domain AW19_779 PF00501 AMP-binding enzyme AW19_78 PF00929 Exonuclease AW19_780 PF00425 chorismate binding enzyme AW19_782 PF00593 TonB dependent receptor AW19_782 PF07715 TonB-dependent Receptor Plug Domain AW19_783 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AW19_784 PF00528 Binding-protein-dependent transport system inner membrane component AW19_785 PF12911 N-terminal TM domain of oligopeptide transport permease C AW19_785 PF00528 Binding-protein-dependent transport system inner membrane component AW19_786 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AW19_786 PF00005 ABC transporter AW19_787 PF08021 Siderophore-interacting FAD-binding domain AW19_787 PF00005 ABC transporter AW19_787 PF04954 Siderophore-interacting protein AW19_787 PF00664 ABC transporter transmembrane region AW19_788 PF00005 ABC transporter AW19_789 PF00067 Cytochrome P450 AW19_791 PF08402 TOBE domain AW19_791 PF00005 ABC transporter AW19_792 PF00528 Binding-protein-dependent transport system inner membrane component AW19_794 PF07690 Major Facilitator Superfamily AW19_795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_795 PF07730 Histidine kinase AW19_795 PF05231 MASE1 AW19_796 PF00072 Response regulator receiver domain AW19_796 PF00196 Bacterial regulatory proteins, luxR family AW19_797 PF12431 Transcriptional regulator AW19_797 PF00072 Response regulator receiver domain AW19_798 PF17203 Single cache domain 3 AW19_798 PF00989 PAS fold AW19_798 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_798 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AW19_799 PF08218 Citrate lyase ligase C-terminal domain AW19_8 PF14492 Elongation Factor G, domain II AW19_8 PF00679 Elongation factor G C-terminus AW19_8 PF03764 Elongation factor G, domain IV AW19_8 PF03144 Elongation factor Tu domain 2 AW19_8 PF00009 Elongation factor Tu GTP binding domain AW19_80 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AW19_800 PF06857 Malonate decarboxylase delta subunit (MdcD) AW19_801 PF03328 HpcH/HpaI aldolase/citrate lyase family AW19_802 PF04223 Citrate lyase, alpha subunit (CitF) AW19_803 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AW19_803 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AW19_804 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AW19_805 PF00939 Sodium:sulfate symporter transmembrane region AW19_806 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AW19_808 PF03480 Bacterial extracellular solute-binding protein, family 7 AW19_809 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AW19_809 PF01648 4'-phosphopantetheinyl transferase superfamily AW19_81 PF00528 Binding-protein-dependent transport system inner membrane component AW19_812 PF00849 RNA pseudouridylate synthase AW19_816 PF06167 Glucose-regulated metallo-peptidase M90 AW19_818 PF01548 Transposase AW19_818 PF02371 Transposase IS116/IS110/IS902 family AW19_82 PF00005 ABC transporter AW19_82 PF00571 CBS domain AW19_821 PF13953 PapC C-terminal domain AW19_821 PF13954 PapC N-terminal domain AW19_821 PF00577 Outer membrane usher protein AW19_822 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AW19_823 PF01066 CDP-alcohol phosphatidyltransferase AW19_826 PF12146 Serine aminopeptidase, S33 AW19_826 PF12147 Putative methyltransferase AW19_827 PF00782 Dual specificity phosphatase, catalytic domain AW19_83 PF00268 Ribonucleotide reductase, small chain AW19_830 PF00483 Nucleotidyl transferase AW19_831 PF00328 Histidine phosphatase superfamily (branch 2) AW19_832 PF14001 YdfZ protein AW19_835 PF10777 Inner membrane protein YlaC AW19_836 PF08240 Alcohol dehydrogenase GroES-like domain AW19_836 PF00109 Beta-ketoacyl synthase, N-terminal domain AW19_836 PF02801 Beta-ketoacyl synthase, C-terminal domain AW19_836 PF00550 Phosphopantetheine attachment site AW19_836 PF08659 KR domain AW19_836 PF00107 Zinc-binding dehydrogenase AW19_836 PF14765 Polyketide synthase dehydratase AW19_836 PF00698 Acyl transferase domain AW19_836 PF16197 Ketoacyl-synthetase C-terminal extension AW19_837 PF16353 Domain of unknown function(DUF4981) AW19_837 PF00703 Glycosyl hydrolases family 2 AW19_837 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AW19_837 PF02837 Glycosyl hydrolases family 2, sugar binding domain AW19_837 PF02929 Beta galactosidase small chain AW19_838 PF00356 Bacterial regulatory proteins, lacI family AW19_839 PF00313 'Cold-shock' DNA-binding domain AW19_84 PF02867 Ribonucleotide reductase, barrel domain AW19_84 PF00317 Ribonucleotide reductase, all-alpha domain AW19_84 PF08343 Ribonucleotide reductase N-terminal AW19_840 PF10781 Dextransucrase DSRB AW19_841 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AW19_841 PF00672 HAMP domain AW19_841 PF02203 Tar ligand binding domain homologue AW19_842 PF02308 MgtC family AW19_843 PF00690 Cation transporter/ATPase, N-terminus AW19_843 PF00689 Cation transporting ATPase, C-terminus AW19_844 PF16884 N-terminal domain of oxidoreductase AW19_844 PF00107 Zinc-binding dehydrogenase AW19_845 PF00582 Universal stress protein family AW19_846 PF05247 Flagellar transcriptional activator (FlhD) AW19_847 PF05280 Flagellar transcriptional activator (FlhC) AW19_848 PF01618 MotA/TolQ/ExbB proton channel family AW19_849 PF13677 Membrane MotB of proton-channel complex MotA/MotB AW19_849 PF00691 OmpA family AW19_85 PF07972 NrdI Flavodoxin like AW19_850 PF01584 CheW-like domain AW19_850 PF09078 CheY binding AW19_850 PF02895 Signal transducing histidine kinase, homodimeric domain AW19_850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_850 PF01627 Hpt domain AW19_851 PF01584 CheW-like domain AW19_852 PF00672 HAMP domain AW19_852 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AW19_852 PF02203 Tar ligand binding domain homologue AW19_853 PF02203 Tar ligand binding domain homologue AW19_853 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AW19_853 PF00672 HAMP domain AW19_854 PF01739 CheR methyltransferase, SAM binding domain AW19_854 PF03705 CheR methyltransferase, all-alpha domain AW19_855 PF00072 Response regulator receiver domain AW19_855 PF01339 CheB methylesterase AW19_856 PF00072 Response regulator receiver domain AW19_857 PF04344 Chemotaxis phosphatase, CheZ AW19_859 PF01312 FlhB HrpN YscU SpaS Family AW19_86 PF00462 Glutaredoxin AW19_860 PF00771 FHIPEP family AW19_862 PF06366 Flagellar protein FlhE AW19_863 PF05130 FlgN protein AW19_864 PF04316 Anti-sigma-28 factor, FlgM AW19_865 PF17656 FlgA N-terminal domain AW19_865 PF13144 Chaperone for flagella basal body P-ring formation AW19_866 PF00460 Flagella basal body rod protein AW19_867 PF00460 Flagella basal body rod protein AW19_867 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AW19_868 PF13860 FlgD Ig-like domain AW19_868 PF03963 Flagellar hook capping protein - N-terminal region AW19_868 PF13861 FlgD Tudor-like domain AW19_869 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AW19_869 PF07559 Flagellar basal body protein FlaE AW19_869 PF00460 Flagella basal body rod protein AW19_87 PF02627 Carboxymuconolactone decarboxylase family AW19_870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AW19_870 PF00460 Flagella basal body rod protein AW19_871 PF00460 Flagella basal body rod protein AW19_871 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AW19_872 PF02107 Flagellar L-ring protein AW19_873 PF02119 Flagellar P-ring protein AW19_874 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AW19_874 PF10135 Rod binding protein AW19_875 PF00460 Flagella basal body rod protein AW19_875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AW19_876 PF00669 Bacterial flagellin N-terminal helical region AW19_877 PF01311 Bacterial export proteins, family 1 AW19_878 PF01313 Bacterial export proteins, family 3 AW19_879 PF00813 FliP family AW19_88 PF00155 Aminotransferase class I and II AW19_88 PF00392 Bacterial regulatory proteins, gntR family AW19_880 PF04347 Flagellar biosynthesis protein, FliO AW19_881 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AW19_881 PF16973 Flagellar motor switch protein FliN N-terminal AW19_882 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AW19_882 PF02154 Flagellar motor switch protein FliM AW19_883 PF03748 Flagellar basal body-associated protein FliL AW19_884 PF02120 Flagellar hook-length control protein FliK AW19_885 PF02050 Flagellar FliJ protein AW19_886 PF18269 T3SS EscN ATPase C-terminal domain AW19_886 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AW19_887 PF02108 Flagellar assembly protein FliH AW19_888 PF01706 FliG C-terminal domain AW19_888 PF14841 FliG middle domain AW19_888 PF14842 FliG N-terminal domain AW19_889 PF08345 Flagellar M-ring protein C-terminal AW19_889 PF01514 Secretory protein of YscJ/FliF family AW19_89 PF05957 Bacterial protein of unknown function (DUF883) AW19_890 PF02049 Flagellar hook-basal body complex protein FliE AW19_892 PF00730 HhH-GPD superfamily base excision DNA repair protein AW19_893 PF01966 HD domain AW19_894 PF12833 Helix-turn-helix domain AW19_895 PF05400 Flagellar protein FliT AW19_896 PF02561 Flagellar protein FliS AW19_897 PF07195 Flagellar hook-associated protein 2 C-terminus AW19_897 PF02465 Flagellar hook-associated protein 2 N-terminus AW19_897 PF07196 Flagellin hook IN motif AW19_898 PF00669 Bacterial flagellin N-terminal helical region AW19_898 PF00700 Bacterial flagellin C-terminal helical region AW19_899 PF04545 Sigma-70, region 4 AW19_899 PF04542 Sigma-70 region 2 AW19_899 PF04539 Sigma-70 region 3 AW19_9 PF01022 Bacterial regulatory protein, arsR family AW19_90 PF06392 Acid shock protein repeat AW19_900 PF02899 Phage integrase, N-terminal SAM-like domain AW19_901 PF00291 Pyridoxal-phosphate dependent enzyme AW19_908 PF14850 DNA-binding domain of Proline dehydrogenase AW19_908 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AW19_908 PF00171 Aldehyde dehydrogenase family AW19_908 PF01619 Proline dehydrogenase AW19_909 PF00474 Sodium:solute symporter family AW19_910 PF03239 Iron permease FTR1 family AW19_911 PF13473 Cupredoxin-like domain AW19_911 PF09375 Imelysin AW19_912 PF04261 Dyp-type peroxidase family AW19_913 PF03358 NADPH-dependent FMN reductase AW19_914 PF00083 Sugar (and other) transporter AW19_916 PF13693 Winged helix-turn-helix DNA-binding AW19_918 PF01344 Kelch motif AW19_919 PF00324 Amino acid permease AW19_921 PF00589 Phage integrase family AW19_923 PF00589 Phage integrase family AW19_926 PF00535 Glycosyl transferase family 2 AW19_93 PF09400 Protein of unknown function (DUF2002) AW19_930 PF00128 Alpha amylase, catalytic domain AW19_930 PF02806 Alpha amylase, C-terminal all-beta domain AW19_932 PF10769 Protein of unknown function (DUF2594) AW19_933 PF00072 Response regulator receiver domain AW19_933 PF00196 Bacterial regulatory proteins, luxR family AW19_934 PF08459 UvrC Helix-hairpin-helix N-terminal AW19_934 PF02151 UvrB/uvrC motif AW19_934 PF01541 GIY-YIG catalytic domain AW19_935 PF01066 CDP-alcohol phosphatidyltransferase AW19_94 PF06711 Protein of unknown function (DUF1198) AW19_942 PF00324 Amino acid permease AW19_943 PF03390 2-hydroxycarboxylate transporter family AW19_944 PF00072 Response regulator receiver domain AW19_945 PF00989 PAS fold AW19_945 PF17203 Single cache domain 3 AW19_945 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AW19_945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_946 PF00455 DeoR C terminal sensor domain AW19_946 PF08220 DeoR-like helix-turn-helix domain AW19_947 PF17042 Nucleotide-binding C-terminal domain AW19_947 PF07005 Sugar-binding N-terminal domain AW19_948 PF00596 Class II Aldolase and Adducin N-terminal domain AW19_949 PF01261 Xylose isomerase-like TIM barrel AW19_950 PF04960 Glutaminase AW19_952 PF01804 Penicillin amidase AW19_954 PF03239 Iron permease FTR1 family AW19_955 PF10634 Fe2+ transport protein AW19_957 PF00005 ABC transporter AW19_957 PF02687 FtsX-like permease family AW19_957 PF12704 MacB-like periplasmic core domain AW19_959 PF12704 MacB-like periplasmic core domain AW19_959 PF00005 ABC transporter AW19_959 PF02687 FtsX-like permease family AW19_96 PF00313 'Cold-shock' DNA-binding domain AW19_960 PF00578 AhpC/TSA family AW19_962 PF09313 Domain of unknown function (DUF1971) AW19_962 PF03848 Tellurite resistance protein TehB AW19_963 PF03466 LysR substrate binding domain AW19_963 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_964 PF02272 DHHA1 domain AW19_964 PF01411 tRNA synthetases class II (A) AW19_964 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AW19_965 PF11575 FhuF 2Fe-2S C-terminal domain AW19_965 PF06276 Ferric iron reductase FhuF-like transporter AW19_966 PF00557 Metallopeptidase family M24 AW19_966 PF05195 Aminopeptidase P, N-terminal domain AW19_968 PF01522 Polysaccharide deacetylase AW19_968 PF14883 Hypothetical glycosyl hydrolase family 13 AW19_969 PF00535 Glycosyl transferase family 2 AW19_97 PF01965 DJ-1/PfpI family AW19_970 PF13994 PgaD-like protein AW19_973 PF02562 PhoH-like protein AW19_974 PF01699 Sodium/calcium exchanger protein AW19_976 PF03466 LysR substrate binding domain AW19_976 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AW19_977 PF00672 HAMP domain AW19_977 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AW19_977 PF07730 Histidine kinase AW19_977 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AW19_978 PF02322 Cytochrome bd terminal oxidase subunit II AW19_979 PF01654 Cytochrome bd terminal oxidase subunit I AW19_981 PF00155 Aminotransferase class I and II AW19_981 PF00392 Bacterial regulatory proteins, gntR family AW19_982 PF00202 Aminotransferase class-III AW19_983 PF04958 Arginine N-succinyltransferase beta subunit AW19_984 PF00171 Aldehyde dehydrogenase family AW19_985 PF04996 Succinylarginine dihydrolase AW19_986 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AW19_987 PF00267 Gram-negative porin AW19_989 PF01979 Amidohydrolase family AW19_990 PF07702 UTRA domain AW19_990 PF00392 Bacterial regulatory proteins, gntR family AW19_991 PF01979 Amidohydrolase family AW19_992 PF05962 HutD AW19_993 PF13407 Periplasmic binding protein domain AW19_994 PF00005 ABC transporter AW19_995 PF02653 Branched-chain amino acid transport system / permease component AW19_996 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AW19_998 PF01551 Peptidase family M23 AW19_998 PF01476 LysM domain