locus-tag	class	description
CEQ36_00025	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CEQ36_00030	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEQ36_00055	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CEQ36_00065	COG0586	Pfam SNARE associated Golgi protein
CEQ36_00075	COG0285	dihydrofolate synthase activity
CEQ36_00080	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
CEQ36_00085	COG1286	toxin biosynthetic process
CEQ36_00090	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CEQ36_00095	COG0163	prenyltransferase activity
CEQ36_00100	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEQ36_00105	COG4215	(ABC) transporter
CEQ36_00110	COG4160	amino acid transport
CEQ36_00115	COG4598	ABC transporter
CEQ36_00120	COG1090	epimerase
CEQ36_00130	COG0622	Phosphoesterase
CEQ36_00135	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
CEQ36_00140	COG3037	sugar-specific permease SgaT UlaA
CEQ36_00150	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CEQ36_00155	COG1609	Transcriptional regulator
CEQ36_00160	COG0857	belongs to the CobB CobQ family
CEQ36_00160	COG0280	phosphate acetyltransferase
CEQ36_00170	COG3092	negative regulation of chromosome organization
CEQ36_00180	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CEQ36_00185	COG0471	metal ion transport
CEQ36_00185	COG0490	domain, Protein
CEQ36_00190	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
CEQ36_00200	COG0436	Aminotransferase
CEQ36_00205	COG0583	DNA-binding transcription factor activity
CEQ36_00220	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CEQ36_00225	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CEQ36_00225	COG0649	NAD binding
CEQ36_00230	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
CEQ36_00240	COG1034	ATP synthesis coupled electron transport
CEQ36_00245	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CEQ36_00250	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CEQ36_00255	COG0839	Belongs to the complex I subunit 6 family
CEQ36_00260	COG0713	ATP synthesis coupled electron transport
CEQ36_00265	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CEQ36_00270	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CEQ36_00275	COG1007	ATP synthesis coupled electron transport
CEQ36_00290	COG2731	YhcH YjgK YiaL family protein
CEQ36_00295	COG3265	gluconokinase activity
CEQ36_00300	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ36_00305	COG1609	Transcriptional regulator
CEQ36_00310	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CEQ36_00320	COG4702	Belongs to the UPF0303 family
CEQ36_00325	COG0129	dihydroxy-acid dehydratase activity
CEQ36_00330	COG4575	ribosome binding
CEQ36_00335	COG1169	isochorismate synthase
CEQ36_00340	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
CEQ36_00350	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CEQ36_00355	COG1441	menaquinone biosynthetic process
CEQ36_00375	COG0814	amino acid
CEQ36_00410	COG4574	serine-type endopeptidase inhibitor activity
CEQ36_00415	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CEQ36_00425	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CEQ36_00430	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CEQ36_00440	COG2205	protein histidine kinase activity
CEQ36_00440	COG0784	Response regulator, receiver
CEQ36_00450	COG2198	Histidine kinase
CEQ36_00450	COG0642	Histidine kinase
CEQ36_00455	COG2223	nitrite transmembrane transporter activity
CEQ36_00460	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEQ36_00470	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CEQ36_00470	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CEQ36_00470	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CEQ36_00480	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
CEQ36_00540	COG3188	usher protein
CEQ36_00555	COG1301	dicarboxylic acid transport
CEQ36_00570	COG3799	methylaspartate ammonia-lyase activity
CEQ36_00575	COG4865	methylaspartate mutase activity
CEQ36_00585	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CEQ36_00595	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CEQ36_00595	COG1648	precorrin-2 dehydrogenase activity
CEQ36_00600	COG0583	DNA-binding transcription factor activity
CEQ36_00605	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CEQ36_00605	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CEQ36_00620	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CEQ36_00670	COG3772	lysozyme
CEQ36_00690	COG4386	tail sheath protein
CEQ36_00730	COG3299	homolog of phage Mu protein gp47
CEQ36_00755	COG1263	PTS System
CEQ36_00755	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CEQ36_00755	COG2190	(PTS) system
CEQ36_00760	COG2723	6-phospho-beta-galactosidase activity
CEQ36_00765	COG3338	carbonate dehydratase activity
CEQ36_00785	COG3082	Protein of unknown function (DUF1414)
CEQ36_00790	COG3081	Nucleoid-associated protein
CEQ36_00800	COG1061	Type III restriction enzyme res subunit
CEQ36_00805	COG1187	pseudouridine synthase activity
CEQ36_00810	COG2814	Major facilitator Superfamily
CEQ36_00825	COG4172	Belongs to the ABC transporter superfamily
CEQ36_00830	COG4239	(ABC) transporter, permease
CEQ36_00835	COG4174	ABC transporter (Permease)
CEQ36_00840	COG4166	transmembrane transport
CEQ36_00845	COG2200	EAL domain
CEQ36_00850	COG0791	NLP P60 protein
CEQ36_00855	COG0671	phosphoesterase, PA-phosphatase related
CEQ36_00860	COG0523	cobalamin synthesis protein
CEQ36_00870	COG2186	Transcriptional regulator
CEQ36_00875	COG0246	Mannitol dehydrogenase
CEQ36_00885	COG1312	Catalyzes the dehydration of D-mannonate
CEQ36_00890	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CEQ36_00915	COG2222	sugar isomerase
CEQ36_00920	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CEQ36_00925	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CEQ36_00930	COG3716	PTS system mannose fructose sorbose family IID component
CEQ36_00940	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CEQ36_00950	COG1349	DNA-binding transcription factor activity
CEQ36_00960	COG3005	denitrification pathway
CEQ36_00975	COG1105	Belongs to the carbohydrate kinase PfkB family
CEQ36_00980	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CEQ36_00980	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CEQ36_00980	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CEQ36_00985	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
CEQ36_00990	COG2855	membrane
CEQ36_01000	COG0583	DNA-binding transcription factor activity
CEQ36_01005	COG0833	amino acid
CEQ36_01010	COG4771	TonB-dependent receptor
CEQ36_01015	COG0625	glutathione transferase activity
CEQ36_01040	COG2011	ABC-type metal ion transport system permease component
CEQ36_01045	COG0626	cystathionine gamma-synthase activity
CEQ36_01055	COG1686	Belongs to the peptidase S11 family
CEQ36_01060	COG1760	l-serine dehydratase
CEQ36_01065	COG0814	amino acid
CEQ36_01075	COG1349	DNA-binding transcription factor activity
CEQ36_01080	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CEQ36_01085	COG0671	phosphoesterase, PA-phosphatase related
CEQ36_01095	COG0569	domain protein
CEQ36_01095	COG2985	domain, Protein
CEQ36_01100	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CEQ36_01115	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CEQ36_01120	COG3842	ATPase activity
CEQ36_01125	COG1176	ABC-type spermidine putrescine transport system, permease component I
CEQ36_01130	COG1177	transmembrane transport
CEQ36_01145	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEQ36_01150	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CEQ36_01155	COG1454	alcohol dehydrogenase
CEQ36_01160	COG1012	belongs to the aldehyde dehydrogenase family
CEQ36_01165	COG1414	Transcriptional regulator
CEQ36_01170	COG4160	amino acid transport
CEQ36_01175	COG4215	(ABC) transporter
CEQ36_01180	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEQ36_01185	COG1126	abc transporter atp-binding protein
CEQ36_01200	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CEQ36_01205	COG0702	epimerase
CEQ36_01210	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
CEQ36_01220	COG0028	Belongs to the TPP enzyme family
CEQ36_01225	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CEQ36_01230	COG1151	hydroxylamine reductase activity
CEQ36_01235	COG2431	L-lysine efflux transmembrane transporter activity
CEQ36_01240	COG3593	DNA synthesis involved in DNA repair
CEQ36_01245	COG2990	Protein conserved in bacteria
CEQ36_01250	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ36_01260	COG1278	Cold shock
CEQ36_01265	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
CEQ36_01270	COG0542	response to heat
CEQ36_01275	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CEQ36_01285	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CEQ36_01295	COG0492	ferredoxin-NADP+ reductase activity
CEQ36_01305	COG1674	ftsk spoiiie
CEQ36_01305	COG3107	peptidoglycan biosynthetic process
CEQ36_01310	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CEQ36_01315	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CEQ36_01320	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CEQ36_01325	COG2814	Major facilitator Superfamily
CEQ36_01330	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CEQ36_01335	COG1882	Formate acetyltransferase
CEQ36_01340	COG2116	formate transmembrane transporter activity
CEQ36_01345	COG1944	ATP diphosphatase activity
CEQ36_01350	COG0252	asparaginase activity
CEQ36_01360	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CEQ36_01375	COG0539	negative regulation of cytoplasmic translation
CEQ36_01380	COG0776	regulation of translation
CEQ36_01385	COG0658	competence protein
CEQ36_01385	COG2333	competence protein COMEC
CEQ36_01395	COG1663	tetraacyldisaccharide 4'-kinase activity
CEQ36_01400	COG5383	Protein conserved in bacteria
CEQ36_01405	COG1278	Cold shock
CEQ36_01410	COG1278	Cold shock
CEQ36_01415	COG2835	tetraacyldisaccharide 4'-kinase activity
CEQ36_01425	COG3173	Aminoglycoside phosphotransferase
CEQ36_01435	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CEQ36_01445	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CEQ36_01450	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
CEQ36_01455	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
CEQ36_01460	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
CEQ36_01465	COG2989	Protein conserved in bacteria
CEQ36_01470	COG3108	Peptidase M15
CEQ36_01475	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CEQ36_01480	COG2200	EAL domain
CEQ36_01485	COG1448	Aminotransferase
CEQ36_01495	COG0017	Asparaginyl-tRNA synthetase
CEQ36_01500	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CEQ36_01510	COG0308	aminopeptidase N
CEQ36_01515	COG0167	dihydroorotate dehydrogenase activity
CEQ36_01530	COG3217	Mosc domain protein beta barrel domain protein
CEQ36_01530	COG0633	Ferredoxin
CEQ36_01535	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CEQ36_01535	COG0116	Belongs to the methyltransferase superfamily
CEQ36_01540	COG0488	(ABC) transporter
CEQ36_01545	COG2995	paraquat-inducible protein a
CEQ36_01550	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CEQ36_01550	COG3008	intermembrane lipid transfer
CEQ36_01555	COG3009	Protein conserved in bacteria
CEQ36_01560	COG3130	regulation of translation
CEQ36_01565	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CEQ36_01575	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CEQ36_01580	COG1067	ATP-dependent peptidase activity
CEQ36_01585	COG3120	sequence-specific DNA binding
CEQ36_01590	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CEQ36_01590	COG2885	chlorophyll binding
CEQ36_01595	COG5404	Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division
CEQ36_01600	COG3070	regulator of competence-specific genes
CEQ36_01605	COG1289	transmembrane transporter activity
CEQ36_01610	COG3304	Inner membrane component domain
CEQ36_01615	COG0210	DNA helicase
CEQ36_01625	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
CEQ36_01630	COG1832	CoA-binding protein
CEQ36_01635	COG3785	DNA binding
CEQ36_01645	COG1254	Belongs to the acylphosphatase family
CEQ36_01650	COG2920	part of a sulfur-relay system
CEQ36_01675	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CEQ36_01680	COG3121	Chaperone
CEQ36_01695	COG3121	Chaperone
CEQ36_01730	COG0058	SHG alpha-glucan phosphorylase activity
CEQ36_01740	COG0745	RESPONSE REGULATOR receiver
CEQ36_01745	COG1366	Belongs to the anti-sigma-factor antagonist family
CEQ36_01750	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CEQ36_01760	COG1215	transferase activity, transferring glycosyl groups
CEQ36_01785	COG3437	response regulator, receiver
CEQ36_01785	COG4999	Histidine kinase
CEQ36_01785	COG3850	Histidine kinase
CEQ36_01785	COG2205	protein histidine kinase activity
CEQ36_01790	COG0745	RESPONSE REGULATOR receiver
CEQ36_01790	COG3706	GGDEF domain
CEQ36_01795	COG0583	DNA-binding transcription factor activity
CEQ36_01805	COG1414	Transcriptional regulator
CEQ36_01810	COG3960	tartronate-semialdehyde synthase activity
CEQ36_01815	COG3622	Belongs to the hyi family
CEQ36_01820	COG2084	Dehydrogenase
CEQ36_01825	COG1953	Uracil, thiamine, allantoin
CEQ36_01835	COG2233	PERMEase
CEQ36_01840	COG1929	Belongs to the glycerate kinase type-1 family
CEQ36_01845	COG3257	ureidoglycine aminohydrolase activity
CEQ36_01850	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CEQ36_01855	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CEQ36_01860	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CEQ36_01865	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CEQ36_01875	COG0549	Belongs to the carbamate kinase family
CEQ36_01895	COG1470	cell adhesion involved in biofilm formation
CEQ36_01895	COG1388	LysM domain
CEQ36_01915	COG0076	glutamate decarboxylase activity
CEQ36_01920	COG0531	amino acid
CEQ36_01925	COG2066	Belongs to the glutaminase family
CEQ36_01930	COG2771	luxR family
CEQ36_01935	COG3916	Acyl-homoserine-lactone synthase
CEQ36_01965	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
CEQ36_01970	COG2943	transferase activity, transferring hexosyl groups
CEQ36_01975	COG5645	(Lipo)protein
CEQ36_01990	COG3104	oligopeptide transport
CEQ36_01995	COG2814	Major facilitator Superfamily
CEQ36_02000	COG2259	Doxx family
CEQ36_02005	COG1560	Kdo2-lipid A biosynthetic process
CEQ36_02045	COG0628	permease
CEQ36_02075	COG0418	dihydroorotase activity
CEQ36_02080	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CEQ36_02085	COG1530	ribonuclease E activity
CEQ36_02090	COG0564	pseudouridine synthase activity
CEQ36_02100	COG1399	metal-binding, possibly nucleic acid-binding protein
CEQ36_02105	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CEQ36_02110	COG0416	fatty acid biosynthetic process
CEQ36_02120	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CEQ36_02125	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ36_02135	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CEQ36_02140	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CEQ36_02145	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CEQ36_02150	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CEQ36_02155	COG0470	DNA polymerase III
CEQ36_02160	COG0084	hydrolase, TatD family'
CEQ36_02165	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CEQ36_02165	COG1263	PTS System
CEQ36_02175	COG0537	adenosine 5'-monophosphoramidase activity
CEQ36_02180	COG5633	Lipoprotein
CEQ36_02185	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
CEQ36_02200	COG3150	esterase
CEQ36_02205	COG1252	NADH dehydrogenase
CEQ36_02210	COG3134	Outer membrane lipoprotein
CEQ36_02215	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CEQ36_02220	COG4591	ABC-type transport system involved in lipoprotein release permease component
CEQ36_02230	COG4591	ABC-type transport system involved in lipoprotein release permease component
CEQ36_02240	COG1940	carbohydrate kinase activity
CEQ36_02245	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CEQ36_02255	COG2850	peptidyl-arginine hydroxylation
CEQ36_02265	COG0745	RESPONSE REGULATOR receiver
CEQ36_02275	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CEQ36_02280	COG2915	High frequency lysogenization protein hflD homolog
CEQ36_02285	COG0482	sulfurtransferase activity
CEQ36_02295	COG1187	pseudouridine synthase activity
CEQ36_02300	COG0538	isocitrate dehydrogenase activity
CEQ36_02320	COG3397	chitin binding
CEQ36_02330	COG0840	transmembrane signaling receptor activity
CEQ36_02340	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CEQ36_02350	COG2873	o-acetylhomoserine
CEQ36_02355	COG0702	epimerase
CEQ36_02360	COG1733	regulation of RNA biosynthetic process
CEQ36_02370	COG0697	spore germination
CEQ36_02380	COG3755	Protein conserved in bacteria
CEQ36_02395	COG4251	negative regulation of phosphorylation
CEQ36_02395	COG3706	GGDEF domain
CEQ36_02395	COG5001	Diguanylate cyclase
CEQ36_02395	COG2203	Gaf domain
CEQ36_02405	COG1132	(ABC) transporter
CEQ36_02425	COG2207	Transcriptional regulator
CEQ36_02460	COG1113	amino acid transport
CEQ36_02475	COG1278	Cold shock
CEQ36_02485	COG0768	penicillin binding
CEQ36_02490	COG2226	methyltransferase
CEQ36_02500	COG3447	MASE1 domain protein
CEQ36_02500	COG5001	Diguanylate cyclase
CEQ36_02500	COG5002	protein histidine kinase activity
CEQ36_02515	COG1971	Probably functions as a manganese efflux pump
CEQ36_02520	COG4811	Protein of unknown function (DUF986)
CEQ36_02525	COG3716	PTS system mannose fructose sorbose family IID component
CEQ36_02530	COG3715	PTS system
CEQ36_02535	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CEQ36_02535	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CEQ36_02540	COG1253	flavin adenine dinucleotide binding
CEQ36_02545	COG1760	l-serine dehydratase
CEQ36_02550	COG0494	nUDIX hydrolase
CEQ36_02560	COG3140	Belongs to the UPF0181 family
CEQ36_02565	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CEQ36_02570	COG0513	Belongs to the DEAD box helicase family
CEQ36_02575	COG3141	response to X-ray
CEQ36_02590	COG1770	oligopeptidase
CEQ36_02595	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CEQ36_02610	COG1528	Iron-storage protein
CEQ36_02615	COG2372	response to copper ion
CEQ36_02620	COG1276	copper resistance
CEQ36_02630	COG0582	viral genome integration into host DNA
CEQ36_02675	COG1396	sequence-specific DNA binding
CEQ36_02745	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
CEQ36_02970	COG1943	Transposase
CEQ36_02995	COG0589	response to stress
CEQ36_03005	COG0668	transmembrane transport
CEQ36_03010	COG1187	pseudouridine synthase activity
CEQ36_03020	COG0697	spore germination
CEQ36_03040	COG0625	glutathione transferase activity
CEQ36_03070	COG2203	Gaf domain
CEQ36_03070	COG3706	GGDEF domain
CEQ36_03070	COG4251	negative regulation of phosphorylation
CEQ36_03070	COG5001	Diguanylate cyclase
CEQ36_03085	COG3008	intermembrane lipid transfer
CEQ36_03090	COG2995	paraquat-inducible protein a
CEQ36_03095	COG1956	GAF domain-containing protein
CEQ36_03105	COG0793	Belongs to the peptidase S41A family
CEQ36_03110	COG0501	Belongs to the peptidase M48B family
CEQ36_03115	COG2814	Major facilitator Superfamily
CEQ36_03120	COG0823	Involved in the tonB-independent uptake of proteins
CEQ36_03130	COG3023	N-Acetylmuramoyl-L-alanine amidase
CEQ36_03140	COG1988	membrane-bound metal-dependent
CEQ36_03145	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CEQ36_03155	COG3842	ATPase activity
CEQ36_03160	COG0395	ABC-type sugar transport system, permease component
CEQ36_03165	COG1175	transmembrane transport
CEQ36_03175	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ36_03185	COG1917	Cupin 2, conserved barrel domain protein
CEQ36_03190	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CEQ36_03200	COG0583	DNA-binding transcription factor activity
CEQ36_03205	COG0427	acetyl-CoA hydrolase
CEQ36_03210	COG1024	Enoyl-CoA hydratase
CEQ36_03215	COG1703	isobutyryl-CoA mutase activity
CEQ36_03220	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CEQ36_03220	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CEQ36_03230	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CEQ36_03235	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CEQ36_03240	COG1121	(ABC) transporter
CEQ36_03245	COG0803	Belongs to the bacterial solute-binding protein 9 family
CEQ36_03280	COG3623	hexulose-6-phosphate isomerase
CEQ36_03285	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
CEQ36_03290	COG1070	Carbohydrate kinase
CEQ36_03310	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEQ36_03315	COG1129	ABC transporter
CEQ36_03320	COG1414	Transcriptional regulator
CEQ36_03325	COG1811	Na channel or pump
CEQ36_03330	COG4249	Peptidase C14 caspase catalytic subunit p20
CEQ36_03340	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CEQ36_03345	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CEQ36_03365	COG0776	regulation of translation
CEQ36_03375	COG4139	cobalamin transport
CEQ36_03380	COG0386	Belongs to the glutathione peroxidase family
CEQ36_03385	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
CEQ36_03390	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CEQ36_03395	COG0463	Glycosyl transferase, family 2
CEQ36_03405	COG0726	polysaccharide deacetylase
CEQ36_03410	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CEQ36_03415	COG2076	Multidrug Resistance protein
CEQ36_03420	COG2076	Multidrug Resistance protein
CEQ36_03425	COG0791	NLP P60 protein
CEQ36_03430	COG0095	Lipoate-protein ligase
CEQ36_03440	COG4558	Periplasmic binding protein
CEQ36_03445	COG3720	iron ion transport
CEQ36_03460	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CEQ36_03465	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CEQ36_03475	COG0574	Belongs to the PEP-utilizing enzyme family
CEQ36_03475	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CEQ36_03485	COG0628	permease
CEQ36_03490	COG0247	lactate metabolic process
CEQ36_03490	COG0277	FAD linked oxidase domain protein
CEQ36_03495	COG2050	protein possibly involved in aromatic compounds catabolism
CEQ36_03505	COG0316	Belongs to the HesB IscA family
CEQ36_03510	COG0719	Fe-S assembly protein
CEQ36_03515	COG0396	ATPase activity
CEQ36_03520	COG0719	Fe-S assembly protein
CEQ36_03530	COG2166	iron-sulfur cluster assembly
CEQ36_03535	COG1388	LysM domain
CEQ36_03535	COG1376	ErfK ybiS ycfS ynhG family protein
CEQ36_03540	COG4238	major outer membrane lipoprotein
CEQ36_03565	COG0534	Mate efflux family protein
CEQ36_03570	COG0307	riboflavin synthase, alpha
CEQ36_03575	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CEQ36_03580	COG2814	Major facilitator Superfamily
CEQ36_03585	COG0583	DNA-binding transcription factor activity
CEQ36_03590	COG1609	Transcriptional regulator
CEQ36_03600	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CEQ36_03605	COG0791	NLP P60 protein
CEQ36_03610	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CEQ36_03615	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CEQ36_03620	COG0346	lactoylglutathione lyase activity
CEQ36_03625	COG1902	pentaerythritol trinitrate reductase activity
CEQ36_03630	COG1309	transcriptional regulator
CEQ36_03635	COG2194	sulfuric ester hydrolase activity
CEQ36_03640	COG3313	Fe-S protein
CEQ36_03645	COG4989	oxidoreductase activity
CEQ36_03650	COG1289	transmembrane transporter activity
CEQ36_03655	COG1566	PFAM secretion protein HlyD family protein
CEQ36_03665	COG1846	Transcriptional regulator
CEQ36_03670	COG3133	Outer membrane lipoprotein
CEQ36_03675	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
CEQ36_03680	COG3895	Periplasmic Protein
CEQ36_03690	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CEQ36_03700	COG0625	glutathione transferase activity
CEQ36_03720	COG3104	oligopeptide transport
CEQ36_03725	COG0583	DNA-binding transcription factor activity
CEQ36_03730	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CEQ36_03730	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CEQ36_03740	COG4172	Belongs to the ABC transporter superfamily
CEQ36_03750	COG4171	peptide transport system, permease
CEQ36_03755	COG4168	peptide transport system, permease
CEQ36_03760	COG4166	transmembrane transport
CEQ36_03780	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CEQ36_03785	COG1842	Phage shock protein A
CEQ36_03795	COG1983	PspC domain protein
CEQ36_03805	COG3106	COG3106 Predicted ATPase
CEQ36_03810	COG3768	UPF0283 membrane protein
CEQ36_03830	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CEQ36_03835	COG4948	Mandelate Racemase Muconate Lactonizing
CEQ36_03840	COG2866	Carboxypeptidase
CEQ36_03845	COG4166	transmembrane transport
CEQ36_03850	COG0598	Magnesium transport protein CorA
CEQ36_03855	COG0037	tRNA processing
CEQ36_03860	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CEQ36_03860	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CEQ36_03860	COG0674	pyruvate-flavodoxin oxidoreductase activity
CEQ36_03860	COG1013	pyruvate-flavodoxin oxidoreductase activity
CEQ36_03870	COG1285	pathogenesis
CEQ36_03875	COG3042	response to heat
CEQ36_03880	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CEQ36_03885	COG2911	Protein conserved in bacteria
CEQ36_03895	COG3784	Protein of unknown function (DUF1318)
CEQ36_03900	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CEQ36_03905	COG1643	Atp-dependent helicase
CEQ36_03920	COG3591	Belongs to the peptidase S1B family
CEQ36_03930	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CEQ36_03935	COG2205	protein histidine kinase activity
CEQ36_03940	COG0745	RESPONSE REGULATOR receiver
CEQ36_03950	COG0531	amino acid
CEQ36_03965	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CEQ36_03970	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CEQ36_03975	COG0589	response to stress
CEQ36_03980	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CEQ36_03985	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CEQ36_04000	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
CEQ36_04010	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ36_04020	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CEQ36_04025	COG0738	Major facilitator superfamily
CEQ36_04040	COG0583	DNA-binding transcription factor activity
CEQ36_04050	COG1011	Hydrolase
CEQ36_04055	COG0251	oxidation-reduction process
CEQ36_04060	COG0440	acetolactate synthase activity
CEQ36_04065	COG0028	Belongs to the TPP enzyme family
CEQ36_04095	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CEQ36_04105	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CEQ36_04110	COG1477	protein flavinylation
CEQ36_04125	COG4215	(ABC) transporter
CEQ36_04135	COG1522	sequence-specific DNA binding
CEQ36_04145	COG0446	pyridine nucleotide-disulphide oxidoreductase
CEQ36_04150	COG0426	domain, Protein
CEQ36_04150	COG1773	rubredoxin
CEQ36_04155	COG3604	Transcriptional regulator
CEQ36_04160	COG0625	glutathione transferase activity
CEQ36_04185	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CEQ36_04190	COG1393	Belongs to the ArsC family
CEQ36_04215	COG0110	maltose O-acetyltransferase activity
CEQ36_04220	COG4221	oxidoreductase activity
CEQ36_04230	COG1742	UPF0060 membrane protein
CEQ36_04250	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CEQ36_04255	COG1940	carbohydrate kinase activity
CEQ36_04260	COG0583	DNA-binding transcription factor activity
CEQ36_04265	COG2814	Major facilitator Superfamily
CEQ36_04285	COG0114	fumarate hydratase activity
CEQ36_04295	COG5339	Protein conserved in bacteria
CEQ36_04305	COG1609	Transcriptional regulator
CEQ36_04310	COG1263	PTS System
CEQ36_04310	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CEQ36_04315	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CEQ36_04325	COG4948	Mandelate Racemase Muconate Lactonizing
CEQ36_04330	COG2190	(PTS) system
CEQ36_04330	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CEQ36_04330	COG1263	PTS System
CEQ36_04335	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CEQ36_04340	COG0385	Bile acid
CEQ36_04345	COG0673	inositol 2-dehydrogenase activity
CEQ36_04355	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEQ36_04365	COG1879	ABC-type sugar transport system periplasmic component
CEQ36_04380	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CEQ36_04390	COG2274	protein secretion by the type I secretion system
CEQ36_04395	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ36_04400	COG2274	protein secretion by the type I secretion system
CEQ36_04405	COG2759	Belongs to the formate--tetrahydrofolate ligase family
CEQ36_04415	COG4657	Part of a membrane complex involved in electron transport
CEQ36_04425	COG4656	Part of a membrane complex involved in electron transport
CEQ36_04430	COG2207	Transcriptional regulator
CEQ36_04430	COG3708	Transcriptional regulator
CEQ36_04435	COG4658	electron transport chain
CEQ36_04440	COG4659	FMN binding
CEQ36_04450	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CEQ36_04455	COG0243	molybdopterin cofactor binding
CEQ36_04460	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
CEQ36_04470	COG1966	Carbon starvation protein
CEQ36_04475	COG2879	small protein
CEQ36_04480	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CEQ36_04485	COG1349	DNA-binding transcription factor activity
CEQ36_04495	COG0235	Class ii aldolase
CEQ36_04505	COG0023	Translation Initiation Factor
CEQ36_04525	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CEQ36_04530	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
CEQ36_04535	COG0671	phosphoesterase, PA-phosphatase related
CEQ36_04540	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CEQ36_04545	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CEQ36_04555	COG0583	DNA-binding transcription factor activity
CEQ36_04560	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CEQ36_04570	COG0616	signal peptide processing
CEQ36_04575	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ36_04590	COG1187	pseudouridine synthase activity
CEQ36_04600	COG0009	L-threonylcarbamoyladenylate synthase
CEQ36_04605	COG0613	PHP domain protein
CEQ36_04620	COG0512	Glutamine amidotransferase of anthranilate synthase
CEQ36_04630	COG0135	phosphoribosylanthranilate isomerase activity
CEQ36_04630	COG0134	indole-3-glycerol-phosphate synthase activity
CEQ36_04635	COG0133	tryptophan synthase activity
CEQ36_04640	COG0159	tryptophan synthase activity
CEQ36_04650	COG3047	cAMP biosynthetic process
CEQ36_04670	COG2917	probably involved in intracellular septation
CEQ36_04675	COG1607	acyl-coa hydrolase
CEQ36_04680	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
CEQ36_04685	COG2350	Protein conserved in bacteria
CEQ36_04710	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CEQ36_04715	COG3099	Belongs to the UPF0263 family
CEQ36_04725	COG0444	Belongs to the ABC transporter superfamily
CEQ36_04730	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CEQ36_04745	COG4166	transmembrane transport
CEQ36_04750	COG2095	MarC family integral membrane protein
CEQ36_04760	COG1454	alcohol dehydrogenase
CEQ36_04760	COG1012	belongs to the aldehyde dehydrogenase family
CEQ36_04765	COG1435	thymidine kinase activity
CEQ36_04770	COG2916	Histone family protein nucleoid-structuring protein H-NS
CEQ36_04780	COG0745	RESPONSE REGULATOR receiver
CEQ36_04785	COG1752	Esterase of the alpha-beta hydrolase superfamily
CEQ36_04795	COG3012	SEC-C Motif Domain Protein
CEQ36_04800	COG0788	formyltetrahydrofolate deformylase activity
CEQ36_04840	COG0708	Exodeoxyribonuclease III
CEQ36_04845	COG0494	nUDIX hydrolase
CEQ36_04855	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CEQ36_04865	COG0778	Nitroreductase
CEQ36_04870	COG0616	signal peptide processing
CEQ36_04875	COG0252	asparaginase activity
CEQ36_04880	COG1335	isochorismatase
CEQ36_04885	COG3139	Protein of unknown function (DUF1315)
CEQ36_04905	COG3713	MltA-interacting MipA family protein
CEQ36_04915	COG2766	serine protein kinase
CEQ36_04920	COG2718	Belongs to the UPF0229 family
CEQ36_04930	COG2202	Pas domain
CEQ36_04930	COG2200	EAL domain
CEQ36_04930	COG2199	diguanylate cyclase activity
CEQ36_04935	COG2814	Major facilitator Superfamily
CEQ36_04940	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CEQ36_04945	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEQ36_04950	COG2719	SpoVR family
CEQ36_04955	COG2186	Transcriptional regulator
CEQ36_04960	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CEQ36_04965	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CEQ36_04970	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CEQ36_04980	COG2983	Belongs to the UPF0260 family
CEQ36_04985	COG0179	Fumarylacetoacetate (FAA) hydrolase
CEQ36_04990	COG2951	lytic endotransglycosylase activity
CEQ36_04995	COG3100	YcgL domain-containing protein
CEQ36_05005	COG0850	regulation of cytokinetic process
CEQ36_05010	COG2894	cell division
CEQ36_05015	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
CEQ36_05020	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
CEQ36_05025	COG0318	PFAM AMP-dependent synthetase and ligase
CEQ36_05030	COG3065	identical protein binding
CEQ36_05040	COG1199	ATP-dependent helicase activity
CEQ36_05045	COG0251	oxidation-reduction process
CEQ36_05050	COG2076	Multidrug Resistance protein
CEQ36_05055	COG2076	Multidrug Resistance protein
CEQ36_05060	COG0800	Aldolase
CEQ36_05070	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CEQ36_05075	COG1737	Transcriptional regulator
CEQ36_05080	COG0469	pyruvate kinase activity
CEQ36_05085	COG1560	Kdo2-lipid A biosynthetic process
CEQ36_05090	COG0739	heme binding
CEQ36_05095	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
CEQ36_05100	COG1121	(ABC) transporter
CEQ36_05105	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CEQ36_05110	COG3104	oligopeptide transport
CEQ36_05115	COG2255	four-way junction helicase activity
CEQ36_05120	COG0632	four-way junction helicase activity
CEQ36_05130	COG0217	transcriptional regulatory protein
CEQ36_05135	COG0494	nUDIX hydrolase
CEQ36_05140	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CEQ36_05145	COG1335	isochorismatase
CEQ36_05150	COG1801	Protein of unknown function DUF72
CEQ36_05155	COG3788	relative of glutathione S-transferase, MAPEG superfamily
CEQ36_05170	COG3142	Participates in the control of copper homeostasis
CEQ36_05175	COG3102	Protein conserved in bacteria
CEQ36_05210	COG0673	inositol 2-dehydrogenase activity
CEQ36_05220	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CEQ36_05225	COG0477	Major facilitator Superfamily
CEQ36_05235	COG3381	protein complex oligomerization
CEQ36_05245	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CEQ36_05270	COG3706	GGDEF domain
CEQ36_05275	COG0659	secondary active sulfate transmembrane transporter activity
CEQ36_05285	COG2912	Transglutaminase-like superfamily
CEQ36_05290	COG3094	Invasion gene expression up-regulator, SirB
CEQ36_05295	COG2890	protein-(glutamine-N5) methyltransferase activity
CEQ36_05300	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CEQ36_05305	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
CEQ36_05310	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
CEQ36_05320	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CEQ36_05330	COG0193	aminoacyl-tRNA hydrolase activity
CEQ36_05340	COG0012	GTP binding
CEQ36_05350	COG4942	peptidase
CEQ36_05360	COG3443	Belongs to the bacterial solute-binding protein 9 family
CEQ36_05365	COG4211	Belongs to the binding-protein-dependent transport system permease family
CEQ36_05370	COG1129	ABC transporter
CEQ36_05385	COG0402	S-adenosylhomocysteine deaminase activity
CEQ36_05395	COG1228	amidohydrolase
CEQ36_05415	COG3724	N-succinylarginine dihydrolase activity
CEQ36_05425	COG3138	arginine N-succinyltransferase
CEQ36_05430	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CEQ36_05435	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEQ36_05440	COG1271	oxidase subunit
CEQ36_05445	COG1294	oxidase, subunit
CEQ36_05455	COG3850	Histidine kinase
CEQ36_05460	COG0583	DNA-binding transcription factor activity
CEQ36_05465	COG2814	Major facilitator Superfamily
CEQ36_05475	COG0387	Pfam Sodium calcium exchanger
CEQ36_05480	COG1702	phosphate starvation-inducible protein PhoH
CEQ36_05495	COG3658	cytochrome
CEQ36_05500	COG1215	transferase activity, transferring glycosyl groups
CEQ36_05505	COG0726	polysaccharide deacetylase
CEQ36_05505	COG1649	PFAM Uncharacterised BCR, COG1649
CEQ36_05510	COG0457	Tetratricopeptide repeat
CEQ36_05515	COG0006	proline dipeptidase activity
CEQ36_05520	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CEQ36_05545	COG1136	(ABC) transporter
CEQ36_05545	COG0577	efflux transmembrane transporter activity
CEQ36_05555	COG0577	efflux transmembrane transporter activity
CEQ36_05555	COG1136	(ABC) transporter
CEQ36_05570	COG0672	)-iron permease
CEQ36_05580	COG1447	Phosphotransferase system cellobiose-specific component IIA
CEQ36_05585	COG2723	6-phospho-beta-galactosidase activity
CEQ36_05590	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CEQ36_05595	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CEQ36_05600	COG1609	Transcriptional regulator
CEQ36_05610	COG3622	Belongs to the hyi family
CEQ36_05615	COG0235	Class ii aldolase
CEQ36_05620	COG3395	kinase activity
CEQ36_05625	COG2084	Dehydrogenase
CEQ36_05630	COG1349	DNA-binding transcription factor activity
CEQ36_05635	COG3290	protein histidine kinase activity
CEQ36_05640	COG4565	transcriptional regulatory protein
CEQ36_05645	COG3493	citrate carrier protein
CEQ36_05655	COG2181	nitrate reductase activity
CEQ36_05660	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CEQ36_05665	COG1140	nitrate reductase beta subunit
CEQ36_05670	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CEQ36_05675	COG2223	nitrite transmembrane transporter activity
CEQ36_05680	COG2197	response regulator
CEQ36_05700	COG2223	nitrite transmembrane transporter activity
CEQ36_05705	COG0561	phosphatase activity
CEQ36_05710	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEQ36_05725	COG2197	response regulator
CEQ36_05740	COG3188	usher protein
CEQ36_05745	COG3121	Chaperone
CEQ36_05870	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CEQ36_05875	COG0322	excinuclease ABC activity
CEQ36_05880	COG2197	response regulator
CEQ36_05890	COG3136	membrane protein required for alginate biosynthesis
CEQ36_05900	COG0840	transmembrane signaling receptor activity
CEQ36_05905	COG0366	Alpha amylase catalytic
CEQ36_05930	COG2203	Gaf domain
CEQ36_05930	COG2199	diguanylate cyclase activity
CEQ36_05935	COG0582	viral genome integration into host DNA
CEQ36_05960	COG4974	Belongs to the 'phage' integrase family
CEQ36_06035	COG4695	Portal protein
CEQ36_06130	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
CEQ36_06180	COG1113	amino acid transport
CEQ36_06190	COG1881	PFAM PEBP family protein
CEQ36_06220	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CEQ36_06225	COG0506	proline dehydrogenase activity
CEQ36_06225	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CEQ36_06225	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CEQ36_06255	COG2515	1-aminocyclopropane-1-carboxylate deaminase
CEQ36_06265	COG1191	sigma factor activity
CEQ36_06295	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CEQ36_06300	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CEQ36_06305	COG1677	Flagellar hook-basal body complex protein FliE
CEQ36_06315	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CEQ36_06320	COG1317	bacterial-type flagellum organization
CEQ36_06330	COG2882	bacterial-type flagellum organization
CEQ36_06375	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CEQ36_06380	COG1256	bacterial-type flagellum assembly
CEQ36_06400	COG4786	Flagellar basal body rod
CEQ36_06410	COG1749	Flagellar hook protein flgE
CEQ36_06415	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CEQ36_06420	COG1558	bacterial-type flagellum-dependent cell motility
CEQ36_06425	COG1815	bacterial-type flagellum-dependent cell motility
CEQ36_06435	COG2747	anti-sigma28 factor FlgM
CEQ36_06440	COG3418	PFAM FlgN family protein
CEQ36_06450	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CEQ36_06455	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CEQ36_06460	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
CEQ36_06465	COG0745	RESPONSE REGULATOR receiver
CEQ36_06475	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CEQ36_06480	COG0840	transmembrane signaling receptor activity
CEQ36_06490	COG0840	transmembrane signaling receptor activity
CEQ36_06495	COG0835	chemotaxis
CEQ36_06500	COG2198	Histidine kinase
CEQ36_06500	COG0643	Histidine kinase
CEQ36_06525	COG0589	response to stress
CEQ36_06530	COG2130	NADP-dependent
CEQ36_06540	COG1285	pathogenesis
CEQ36_06545	COG0840	transmembrane signaling receptor activity
CEQ36_06555	COG1278	Cold shock
CEQ36_06560	COG1609	Transcriptional regulator
CEQ36_06565	COG3250	beta-galactosidase activity
CEQ36_06575	COG3321	synthase
CEQ36_06575	COG0604	alcohol dehydrogenase
CEQ36_06575	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ36_06605	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CEQ36_06610	COG3121	Chaperone
CEQ36_06625	COG3121	Chaperone
CEQ36_06645	COG3228	Belongs to the MtfA family
CEQ36_06660	COG0251	oxidation-reduction process
CEQ36_06695	COG2204	response regulator
CEQ36_06710	COG2211	Major facilitator Superfamily
CEQ36_06720	COG2814	Major facilitator Superfamily
CEQ36_06730	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CEQ36_06745	COG0471	metal ion transport
CEQ36_06760	COG3051	citrate lyase alpha subunit
CEQ36_06765	COG2301	Belongs to the HpcH HpaI aldolase family
CEQ36_06770	COG3052	prosthetic group binding
CEQ36_06775	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
CEQ36_06780	COG3290	protein histidine kinase activity
CEQ36_06785	COG4565	transcriptional regulatory protein
CEQ36_06800	COG2271	Major facilitator Superfamily
CEQ36_06805	COG1840	ABC-type Fe3 transport system, periplasmic component
CEQ36_06815	COG3842	ATPase activity
CEQ36_06830	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEQ36_06830	COG2205	protein histidine kinase activity
CEQ36_06860	COG3121	Chaperone
CEQ36_06975	COG3179	chitinase
CEQ36_06980	COG3501	Rhs element vgr protein
CEQ36_07025	COG0583	DNA-binding transcription factor activity
CEQ36_07035	COG1349	DNA-binding transcription factor activity
CEQ36_07040	COG0561	phosphatase activity
CEQ36_07060	COG0835	chemotaxis
CEQ36_07060	COG0784	Response regulator, receiver
CEQ36_07065	COG0534	Mate efflux family protein
CEQ36_07070	COG0137	argininosuccinate synthase activity
CEQ36_07075	COG2211	Major facilitator Superfamily
CEQ36_07080	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
CEQ36_07090	COG0583	DNA-binding transcription factor activity
CEQ36_07095	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
CEQ36_07115	COG1492	cobalamin metabolic process
CEQ36_07165	COG2875	Belongs to the precorrin methyltransferase family
CEQ36_07175	COG2241	protein methyltransferase activity
CEQ36_07180	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
CEQ36_07190	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
CEQ36_07210	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
CEQ36_07245	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
CEQ36_07270	COG2096	Adenosyltransferase
CEQ36_07285	COG4656	Part of a membrane complex involved in electron transport
CEQ36_07295	COG4810	utilization protein
CEQ36_07305	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CEQ36_07315	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CEQ36_07325	COG1879	ABC-type sugar transport system periplasmic component
CEQ36_07330	COG1129	ABC transporter
CEQ36_07335	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEQ36_07360	COG2925	Exonuclease
CEQ36_07365	COG0531	amino acid
CEQ36_07375	COG0371	Dehydrogenase
CEQ36_07380	COG1129	ABC transporter
CEQ36_07385	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEQ36_07390	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CEQ36_07395	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CEQ36_07405	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CEQ36_07410	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CEQ36_07410	COG0131	Imidazoleglycerol-phosphate dehydratase
CEQ36_07415	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CEQ36_07425	COG0107	imidazoleglycerol-phosphate synthase activity
CEQ36_07430	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CEQ36_07430	COG0140	phosphoribosyl-ATP diphosphatase activity
CEQ36_07440	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CEQ36_07445	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CEQ36_07450	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CEQ36_07455	COG1253	flavin adenine dinucleotide binding
CEQ36_07460	COG3069	C4-dicarboxylate transmembrane transporter activity
CEQ36_07465	COG2982	Protein involved in outer membrane biogenesis
CEQ36_07475	COG0572	uridine kinase
CEQ36_07480	COG0489	protein tyrosine kinase activity
CEQ36_07485	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CEQ36_07485	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CEQ36_07505	COG2814	Major facilitator Superfamily
CEQ36_07510	COG1380	Effector of murein hydrolase LrgA
CEQ36_07515	COG1346	cytolysis
CEQ36_07525	COG0281	malic enzyme
CEQ36_07530	COG2949	membrane
CEQ36_07540	COG0298	carbon dioxide binding
CEQ36_07545	COG0375	protein maturation
CEQ36_07550	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CEQ36_07555	COG0651	ATP synthesis coupled electron transport
CEQ36_07560	COG0650	Formate hydrogenlyase subunit 4
CEQ36_07565	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CEQ36_07570	COG4237	Hydrogenase 4 membrane
CEQ36_07575	COG0651	ATP synthesis coupled electron transport
CEQ36_07580	COG3261	NADH dehydrogenase
CEQ36_07580	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
CEQ36_07585	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CEQ36_07590	COG3260	NADH ubiquinone oxidoreductase 20
CEQ36_07600	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CEQ36_07605	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CEQ36_07610	COG3383	formate dehydrogenase (NAD+) activity
CEQ36_07615	COG3604	Transcriptional regulator
CEQ36_07620	COG2116	formate transmembrane transporter activity
CEQ36_07640	COG1609	Transcriptional regulator
CEQ36_07645	COG2311	Membrane
CEQ36_07650	COG0302	gtp cyclohydrolase
CEQ36_07655	COG0477	Major facilitator Superfamily
CEQ36_07660	COG0583	DNA-binding transcription factor activity
CEQ36_07690	COG1136	(ABC) transporter
CEQ36_07700	COG0477	Major facilitator Superfamily
CEQ36_07710	COG0303	'Molybdopterin
CEQ36_07715	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CEQ36_07720	COG0488	(ABC) transporter
CEQ36_07740	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CEQ36_07755	COG4106	trans-aconitate 2-methyltransferase activity
CEQ36_07765	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CEQ36_07770	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEQ36_07775	COG0765	amino acid transport
CEQ36_07780	COG1126	abc transporter atp-binding protein
CEQ36_07785	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
CEQ36_07790	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CEQ36_07795	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CEQ36_07815	COG0697	spore germination
CEQ36_07825	COG0583	DNA-binding transcription factor activity
CEQ36_07830	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ36_07840	COG1174	glycine betaine transport
CEQ36_07845	COG1125	glycine betaine transport
CEQ36_07850	COG1174	glycine betaine transport
CEQ36_07855	COG1732	Glycine betaine
CEQ36_07865	COG0673	inositol 2-dehydrogenase activity
CEQ36_07870	COG2897	thiosulfate sulfurtransferase activity
CEQ36_07880	COG0411	ABC transporter
CEQ36_07900	COG4807	Protein conserved in bacteria
CEQ36_07915	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
CEQ36_07925	COG2261	transglycosylase associated protein
CEQ36_07935	COG1403	HNH endonuclease
CEQ36_07945	COG0277	FAD linked oxidase domain protein
CEQ36_07950	COG1686	Belongs to the peptidase S11 family
CEQ36_07960	COG2239	Acts as a magnesium transporter
CEQ36_07965	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CEQ36_07970	COG0513	Belongs to the DEAD box helicase family
CEQ36_07975	COG1309	transcriptional regulator
CEQ36_07980	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ36_07985	COG1131	(ABC) transporter
CEQ36_07990	COG0842	Transport permease protein
CEQ36_07995	COG0842	Transport permease protein
CEQ36_08000	COG0670	Belongs to the BI1 family
CEQ36_08005	COG0314	molybdopterin synthase activity
CEQ36_08010	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CEQ36_08015	COG0315	cyclic pyranopterin monophosphate synthase activity
CEQ36_08020	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CEQ36_08025	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CEQ36_08030	COG4628	conserved protein (DUF2132)
CEQ36_08035	COG0556	nucleotide-excision repair
CEQ36_08045	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CEQ36_08050	COG2226	methyltransferase
CEQ36_08060	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CEQ36_08070	COG2706	6-phosphogluconolactonase activity
CEQ36_08075	COG0561	phosphatase activity
CEQ36_08085	COG4149	molybdate abc transporter
CEQ36_08090	COG0725	ABC transporter, periplasmic molybdate-binding protein
CEQ36_08100	COG3585	molybdate ion transport
CEQ36_08100	COG2005	Transcriptional regulator
CEQ36_08105	COG1119	ATPase activity
CEQ36_08120	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CEQ36_08130	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CEQ36_08135	COG2017	converts alpha-aldose to the beta-anomer
CEQ36_08145	COG0588	phosphoglycerate mutase activity
CEQ36_08150	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CEQ36_08155	COG2197	response regulator
CEQ36_08160	COG2205	protein histidine kinase activity
CEQ36_08160	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEQ36_08165	COG1230	cation diffusion facilitator family transporter
CEQ36_08175	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
CEQ36_08205	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
CEQ36_08210	COG2885	chlorophyll binding
CEQ36_08215	COG0823	Involved in the tonB-independent uptake of proteins
CEQ36_08220	COG3064	Membrane
CEQ36_08220	COG3064	Membrane
CEQ36_08225	COG0848	biopolymer transport protein
CEQ36_08230	COG0811	peptide transport
CEQ36_08235	COG0824	Thioesterase
CEQ36_08240	COG3790	cyd operon protein YbgE
CEQ36_08245	COG4890	Cyd operon protein YbgT
CEQ36_08250	COG1294	oxidase, subunit
CEQ36_08255	COG1271	oxidase subunit
CEQ36_08260	COG0737	Belongs to the 5'-nucleotidase family
CEQ36_08265	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CEQ36_08270	COG0045	succinate-CoA ligase (ADP-forming) activity
CEQ36_08275	COG0508	dehydrogenase complex catalyzes the overall conversion of
CEQ36_08280	COG0567	Dehydrogenase, E1 component
CEQ36_08290	COG1053	succinate dehydrogenase
CEQ36_08295	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CEQ36_08300	COG2009	succinate dehydrogenase
CEQ36_08325	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
CEQ36_08330	COG1984	allophanate hydrolase subunit 2
CEQ36_08335	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CEQ36_08340	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CEQ36_08345	COG5212	phosphodiesterase
CEQ36_08355	COG3272	Protein of unknown function (DUF1722)
CEQ36_08375	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CEQ36_08380	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
CEQ36_08385	COG2205	protein histidine kinase activity
CEQ36_08390	COG0745	RESPONSE REGULATOR receiver
CEQ36_08400	COG0033	Phosphoglucomutase
CEQ36_08410	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
CEQ36_08490	COG0596	Alpha beta hydrolase
CEQ36_08505	COG0840	transmembrane signaling receptor activity
CEQ36_08515	COG0735	belongs to the Fur family
CEQ36_08535	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CEQ36_08540	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CEQ36_08540	COG2190	(PTS) system
CEQ36_08540	COG1263	PTS System
CEQ36_08545	COG0363	glucosamine-6-phosphate deaminase activity
CEQ36_08550	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CEQ36_08555	COG1940	carbohydrate kinase activity
CEQ36_08555	COG1846	Transcriptional regulator
CEQ36_08560	COG0647	UMP catabolic process
CEQ36_08570	COG0367	asparagine synthase
CEQ36_08615	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEQ36_08620	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CEQ36_08625	COG1702	phosphate starvation-inducible protein PhoH
CEQ36_08630	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CEQ36_08635	COG4535	Mg2 and Co2 transporter CorC
CEQ36_08640	COG0815	Transfers the fatty acyl group on membrane lipoproteins
CEQ36_08655	COG0765	amino acid transport
CEQ36_08660	COG0765	amino acid transport
CEQ36_08665	COG1126	abc transporter atp-binding protein
CEQ36_08675	COG2888	peptidyl-tyrosine sulfation
CEQ36_08680	COG0495	leucyl-tRNA aminoacylation
CEQ36_08685	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
CEQ36_08690	COG1466	dna polymerase III delta subunit
CEQ36_08695	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CEQ36_08700	COG0799	negative regulation of ribosome biogenesis
CEQ36_08710	COG0768	penicillin binding
CEQ36_08715	COG0772	Belongs to the SEDS family
CEQ36_08720	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CEQ36_08725	COG1686	Belongs to the peptidase S11 family
CEQ36_08730	COG2921	Belongs to the UPF0250 family
CEQ36_08735	COG0321	lipoyl(octanoyl) transferase activity
CEQ36_08740	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CEQ36_08745	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CEQ36_08750	COG3706	GGDEF domain
CEQ36_08755	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CEQ36_08760	COG1278	Cold shock
CEQ36_08765	COG1278	Cold shock
CEQ36_08770	COG2197	response regulator
CEQ36_08780	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CEQ36_08800	COG5265	(ABC) transporter
CEQ36_08805	COG2850	peptidyl-arginine hydroxylation
CEQ36_08820	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CEQ36_08825	COG0698	ribose 5-phosphate isomerase
CEQ36_08830	COG1737	Transcriptional regulator
CEQ36_08835	COG1879	ABC-type sugar transport system periplasmic component
CEQ36_08840	COG1129	ABC transporter
CEQ36_08845	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEQ36_08850	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CEQ36_08855	COG1940	carbohydrate kinase activity
CEQ36_08870	COG2610	gluconate transmembrane transporter activity
CEQ36_08880	COG0300	oxidoreductase activity
CEQ36_08890	COG1902	pentaerythritol trinitrate reductase activity
CEQ36_08925	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEQ36_08935	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ36_08940	COG0583	DNA-binding transcription factor activity
CEQ36_08945	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CEQ36_08960	COG0583	DNA-binding transcription factor activity
CEQ36_09015	COG3122	Protein conserved in bacteria
CEQ36_09100	COG3240	lipase activity
CEQ36_09110	COG2169	Transcriptional regulator
CEQ36_09115	COG1486	melibiose metabolic process
CEQ36_09120	COG2211	Major facilitator Superfamily
CEQ36_09130	COG1328	CTP reductase activity
CEQ36_09135	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CEQ36_09150	COG0582	viral genome integration into host DNA
CEQ36_09260	COG4386	tail sheath protein
CEQ36_09440	COG0582	viral genome integration into host DNA
CEQ36_09555	COG1783	phage Terminase large subunit
CEQ36_09595	COG0484	heat shock protein binding
CEQ36_09650	COG0305	Participates in initiation and elongation during chromosome replication
CEQ36_09770	COG0582	viral genome integration into host DNA
CEQ36_09780	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CEQ36_09785	COG2501	S4 domain
CEQ36_09790	COG0215	cysteine-tRNA ligase activity
CEQ36_09795	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CEQ36_09800	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CEQ36_09805	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CEQ36_09810	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CEQ36_09815	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CEQ36_09820	COG4181	ATPase activity
CEQ36_09825	COG2755	lipolytic protein G-D-S-L family
CEQ36_09830	COG0300	oxidoreductase activity
CEQ36_09835	COG3118	belongs to the thioredoxin family
CEQ36_09840	COG0330	HflC and HflK could
CEQ36_09845	COG1585	Membrane protein implicated in regulation of membrane protease activity
CEQ36_09850	COG0789	Transcriptional regulator
CEQ36_09855	COG2217	Heavy metal translocating P-type atpase
CEQ36_09860	COG3735	TraB family
CEQ36_09865	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CEQ36_09870	COG0737	Belongs to the 5'-nucleotidase family
CEQ36_09875	COG2223	nitrite transmembrane transporter activity
CEQ36_09880	COG4651	solute:proton antiporter activity
CEQ36_09880	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CEQ36_09885	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CEQ36_09890	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
CEQ36_09900	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CEQ36_09910	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CEQ36_09915	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
CEQ36_09920	COG0438	transferase activity, transferring glycosyl groups
CEQ36_09930	COG1216	Glycosyl transferase, family 2
CEQ36_09960	COG0028	Belongs to the TPP enzyme family
CEQ36_09980	COG0543	2 iron, 2 sulfur cluster binding
CEQ36_09980	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CEQ36_09985	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CEQ36_09990	COG0563	adenylate kinase activity
CEQ36_09995	COG0326	Molecular chaperone. Has ATPase activity
CEQ36_10000	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CEQ36_10005	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CEQ36_10010	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CEQ36_10015	COG0346	lactoylglutathione lyase activity
CEQ36_10025	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CEQ36_10030	COG2832	Protein of unknown function (DUF454)
CEQ36_10045	COG1196	nuclear chromosome segregation
CEQ36_10045	COG3264	Mechanosensitive ion channel
CEQ36_10050	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
CEQ36_10055	COG1309	transcriptional regulator
CEQ36_10060	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ36_10065	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEQ36_10070	COG0254	rRNA binding
CEQ36_10075	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CEQ36_10080	COG0803	Belongs to the bacterial solute-binding protein 9 family
CEQ36_10085	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CEQ36_10090	COG1121	(ABC) transporter
CEQ36_10115	COG3695	enzyme binding
CEQ36_10120	COG3126	Type III secretion system lipoprotein chaperone (YscW)
CEQ36_10125	COG1946	Acyl-CoA thioesterase
CEQ36_10130	COG0004	ammonium transporteR
CEQ36_10135	COG0347	Belongs to the P(II) protein family
CEQ36_10140	COG1132	(ABC) transporter
CEQ36_10145	COG1132	(ABC) transporter
CEQ36_10150	COG1522	sequence-specific DNA binding
CEQ36_10160	COG0561	phosphatase activity
CEQ36_10165	COG4533	DNA binding
CEQ36_10170	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CEQ36_10175	COG0824	Thioesterase
CEQ36_10180	COG1555	photosystem II stabilization
CEQ36_10185	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CEQ36_10190	COG0776	regulation of translation
CEQ36_10195	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CEQ36_10200	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CEQ36_10205	COG0740	serine-type endopeptidase activity
CEQ36_10220	COG0271	Belongs to the BolA IbaG family
CEQ36_10225	COG3056	Lipoprotein
CEQ36_10230	COG2223	nitrite transmembrane transporter activity
CEQ36_10240	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CEQ36_10245	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CEQ36_10250	COG1845	cytochrome c oxidase, subunit III
CEQ36_10255	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CEQ36_10260	COG0109	protoheme IX farnesyltransferase activity
CEQ36_10265	COG2814	Major facilitator Superfamily
CEQ36_10270	COG1666	GTP binding
CEQ36_10280	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CEQ36_10285	COG0693	protein deglycase activity
CEQ36_10295	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CEQ36_10295	COG0301	tRNA thio-modification
CEQ36_10305	COG0142	geranyltranstransferase activity
CEQ36_10310	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CEQ36_10320	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CEQ36_10325	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CEQ36_10335	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CEQ36_10340	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CEQ36_10340	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CEQ36_10345	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CEQ36_10355	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CEQ36_10360	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CEQ36_10365	COG1862	Preprotein translocase
CEQ36_10375	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CEQ36_10380	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
CEQ36_10385	COG0450	alkyl hydroperoxide reductase
CEQ36_10400	COG0366	Alpha amylase catalytic
CEQ36_10410	COG1114	Component of the transport system for branched-chain amino acids
CEQ36_10420	COG5002	protein histidine kinase activity
CEQ36_10425	COG0745	RESPONSE REGULATOR receiver
CEQ36_10430	COG0420	3'-5' exonuclease activity
CEQ36_10435	COG0419	ATPase involved in DNA repair
CEQ36_10440	COG1940	carbohydrate kinase activity
CEQ36_10445	COG2974	May be involved in recombination
CEQ36_10450	COG3123	guanosine phosphorylase activity
CEQ36_10455	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CEQ36_10475	COG2226	methyltransferase
CEQ36_10490	COG3459	Glycosyltransferase 36 associated
CEQ36_10500	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CEQ36_10505	COG2313	pseudouridylate synthase activity
CEQ36_10510	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CEQ36_10515	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CEQ36_10520	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CEQ36_10540	COG2195	Cleaves the N-terminal amino acid of tripeptides
CEQ36_10545	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CEQ36_10550	COG1181	Belongs to the D-alanine--D-alanine ligase family
CEQ36_10560	COG2991	Protein conserved in bacteria
CEQ36_10565	COG1477	protein flavinylation
CEQ36_10570	COG2871	sodium ion transport
CEQ36_10575	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
CEQ36_10580	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
CEQ36_10585	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
CEQ36_10590	COG1805	sodium ion transport
CEQ36_10595	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
CEQ36_10600	COG3034	peptidoglycan biosynthetic process
CEQ36_10605	COG0121	glutamine amidotransferase
CEQ36_10610	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CEQ36_10615	COG1960	acyl-CoA dehydrogenase activity
CEQ36_10620	COG3914	O-linked N-acetylglucosamine transferase SPINDLY family
CEQ36_10640	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
CEQ36_10650	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
CEQ36_10660	COG0235	Class ii aldolase
CEQ36_10665	COG0436	Aminotransferase
CEQ36_10680	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CEQ36_10690	COG2814	Major facilitator Superfamily
CEQ36_10695	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CEQ36_10705	COG1846	Transcriptional regulator
CEQ36_10720	COG1566	PFAM secretion protein HlyD family protein
CEQ36_10725	COG2814	Major facilitator Superfamily
CEQ36_10730	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CEQ36_10735	COG3118	belongs to the thioredoxin family
CEQ36_10745	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CEQ36_10745	COG1042	CoA-binding domain protein
CEQ36_10745	COG0045	succinate-CoA ligase (ADP-forming) activity
CEQ36_10750	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CEQ36_10755	COG5544	Lipoprotein
CEQ36_10790	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CEQ36_10800	COG2011	ABC-type metal ion transport system permease component
CEQ36_10805	COG1464	Belongs to the NlpA lipoprotein family
CEQ36_10815	COG1720	tRNA m6t6A37 methyltransferase activity
CEQ36_10820	COG0442	prolyl-tRNA aminoacylation
CEQ36_10825	COG3015	lipoprotein NlpE involved in copper resistance
CEQ36_10835	COG4681	YaeQ
CEQ36_10845	COG4568	rho-dependent transcription termination
CEQ36_10855	COG0037	tRNA processing
CEQ36_10860	COG0346	lactoylglutathione lyase activity
CEQ36_10870	COG0825	malonyl-CoA metabolic process
CEQ36_10875	COG0587	DNA-directed DNA polymerase activity
CEQ36_10880	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CEQ36_10885	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CEQ36_10890	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CEQ36_10895	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CEQ36_10905	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
CEQ36_10915	COG0750	zinc metalloprotease
CEQ36_10920	COG0575	Belongs to the CDS family
CEQ36_10925	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CEQ36_10930	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CEQ36_10935	COG0233	cytoplasmic translational termination
CEQ36_10940	COG0528	UMP kinase activity
CEQ36_10945	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CEQ36_10950	COG0052	Belongs to the universal ribosomal protein uS2 family
CEQ36_10955	COG0024	Methionine aminopeptidase
CEQ36_10960	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CEQ36_10965	COG2171	N-acyltransferase activity
CEQ36_10980	COG0564	pseudouridine synthase activity
CEQ36_10985	COG3098	single-species biofilm formation
CEQ36_10995	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CEQ36_10995	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CEQ36_11000	COG1611	Belongs to the LOG family
CEQ36_11005	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CEQ36_11010	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
CEQ36_11015	COG2363	Small membrane protein
CEQ36_11020	COG0583	DNA-binding transcription factor activity
CEQ36_11030	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CEQ36_11035	COG2166	iron-sulfur cluster assembly
CEQ36_11040	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CEQ36_11045	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CEQ36_11065	COG0860	N-Acetylmuramoyl-L-alanine amidase
CEQ36_11070	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CEQ36_11070	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CEQ36_11075	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CEQ36_11080	COG1074	ATP-dependent DNA helicase activity
CEQ36_11085	COG1025	Belongs to the peptidase M16 family
CEQ36_11090	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CEQ36_11105	COG4795	General secretion pathway protein
CEQ36_11110	COG2165	general secretion pathway protein
CEQ36_11120	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CEQ36_11140	COG3066	DNA modification
CEQ36_11145	COG0861	Integral membrane protein TerC family
CEQ36_11155	COG0667	Aldo Keto reductase
CEQ36_11160	COG0477	Major facilitator Superfamily
CEQ36_11165	COG0318	PFAM AMP-dependent synthetase and ligase
CEQ36_11165	COG0204	Acyl-transferase
CEQ36_11175	COG1609	Transcriptional regulator
CEQ36_11185	COG0019	diaminopimelate decarboxylase activity
CEQ36_11190	COG0583	DNA-binding transcription factor activity
CEQ36_11195	COG0583	DNA-binding transcription factor activity
CEQ36_11255	COG2165	general secretion pathway protein
CEQ36_11260	COG2165	general secretion pathway protein
CEQ36_11270	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CEQ36_11290	COG0288	reversible hydration of carbon dioxide
CEQ36_11295	COG1733	regulation of RNA biosynthetic process
CEQ36_11300	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ36_11315	COG0484	heat shock protein binding
CEQ36_11325	COG2271	Major facilitator Superfamily
CEQ36_11340	COG1522	sequence-specific DNA binding
CEQ36_11345	COG3706	GGDEF domain
CEQ36_11375	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CEQ36_11380	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CEQ36_11385	COG4974	Belongs to the 'phage' integrase family
CEQ36_11390	COG0716	FMN binding
CEQ36_11395	COG4452	Inner membrane protein CreD
CEQ36_11400	COG2205	protein histidine kinase activity
CEQ36_11405	COG0745	RESPONSE REGULATOR receiver
CEQ36_11415	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CEQ36_11420	COG0354	folic acid binding
CEQ36_11425	COG1272	protein, Hemolysin III
CEQ36_11435	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ36_11440	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CEQ36_11440	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CEQ36_11445	COG0509	glycine decarboxylation via glycine cleavage system
CEQ36_11450	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CEQ36_11455	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEQ36_11460	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEQ36_11465	COG0006	proline dipeptidase activity
CEQ36_11470	COG3079	Belongs to the UPF0149 family
CEQ36_11480	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
CEQ36_11490	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CEQ36_11495	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CEQ36_11500	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CEQ36_11505	COG0583	DNA-binding transcription factor activity
CEQ36_11515	COG1279	arginine transmembrane transporter activity
CEQ36_11525	COG0191	fructose-bisphosphate aldolase activity
CEQ36_11530	COG0126	phosphoglycerate kinase activity
CEQ36_11535	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CEQ36_11540	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CEQ36_11545	COG0501	Belongs to the peptidase M48B family
CEQ36_11555	COG1166	arginine decarboxylase activity
CEQ36_11565	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CEQ36_11580	COG0640	Transcriptional regulator
CEQ36_11585	COG3091	SprT-like family
CEQ36_11590	COG2356	endonuclease I
CEQ36_11595	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CEQ36_11600	COG0189	ligase activity
CEQ36_11605	COG1678	Uncharacterized ACR, COG1678
CEQ36_11610	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CEQ36_11615	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CEQ36_11625	COG2805	Type II/IV secretion system protein
CEQ36_11630	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CEQ36_11635	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CEQ36_11640	COG0762	integral membrane protein
CEQ36_11645	COG1872	DUF167
CEQ36_11650	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CEQ36_11655	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CEQ36_11665	COG2066	Belongs to the glutaminase family
CEQ36_11670	COG3171	Protein conserved in bacteria
CEQ36_11675	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CEQ36_11680	COG1194	a g-specific adenine glycosylase
CEQ36_11690	COG0741	lytic transglycosylase activity
CEQ36_11700	COG1982	Orn Lys Arg decarboxylase major
CEQ36_11725	COG0288	reversible hydration of carbon dioxide
CEQ36_11740	COG0784	Response regulator, receiver
CEQ36_11740	COG2205	protein histidine kinase activity
CEQ36_11740	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEQ36_11740	COG2198	Histidine kinase
CEQ36_11745	COG2197	response regulator
CEQ36_11750	COG2197	response regulator
CEQ36_11780	COG3501	Rhs element vgr protein
CEQ36_11825	COG3188	usher protein
CEQ36_11830	COG3121	Chaperone
CEQ36_11890	COG2197	response regulator
CEQ36_11945	COG2207	Transcriptional regulator
CEQ36_11960	COG4816	utilization protein
CEQ36_11970	COG4303	Ethanolamine ammonia lyase large subunit
CEQ36_11990	COG4820	ethanolamine utilization protein (EutJ)
CEQ36_12000	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
CEQ36_12005	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
CEQ36_12020	COG4766	ethanolamine catabolic process
CEQ36_12025	COG4917	ethanolamine utilization protein
CEQ36_12030	COG4810	utilization protein
CEQ36_12035	COG3916	Acyl-homoserine-lactone synthase
CEQ36_12040	COG2771	luxR family
CEQ36_12045	COG2188	Transcriptional regulator
CEQ36_12065	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CEQ36_12065	COG2190	(PTS) system
CEQ36_12065	COG1263	PTS System
CEQ36_12070	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
CEQ36_12085	COG0545	Peptidyl-prolyl cis-trans isomerase
CEQ36_12090	COG1105	Belongs to the carbohydrate kinase PfkB family
CEQ36_12095	COG3447	MASE1 domain protein
CEQ36_12095	COG5001	Diguanylate cyclase
CEQ36_12095	COG5002	protein histidine kinase activity
CEQ36_12110	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CEQ36_12125	COG0300	oxidoreductase activity
CEQ36_12135	COG0789	Transcriptional regulator
CEQ36_12140	COG3038	cytochrome b561
CEQ36_12175	COG1230	cation diffusion facilitator family transporter
CEQ36_12180	COG0833	amino acid
CEQ36_12185	COG2040	homocysteine
CEQ36_12305	COG3188	usher protein
CEQ36_12310	COG3121	Chaperone
CEQ36_12315	COG3121	Chaperone
CEQ36_12350	COG1289	transmembrane transporter activity
CEQ36_12410	COG4604	ABC transporter, ATP-binding protein
CEQ36_12415	COG4605	iron ion homeostasis
CEQ36_12425	COG4607	ABC-type enterochelin transport system periplasmic component
CEQ36_12430	COG1283	sodium-dependent phosphate transmembrane transporter activity
CEQ36_12435	COG2195	Cleaves the N-terminal amino acid of tripeptides
CEQ36_12440	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
CEQ36_12450	COG3706	GGDEF domain
CEQ36_12450	COG0745	RESPONSE REGULATOR receiver
CEQ36_12465	COG0477	Major facilitator Superfamily
CEQ36_12470	COG4302	ethanolamine ammonia-lyase activity
CEQ36_12475	COG4303	Ethanolamine ammonia lyase large subunit
CEQ36_12485	COG5001	Diguanylate cyclase
CEQ36_12490	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
CEQ36_12495	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
CEQ36_12500	COG0309	Hydrogenase expression formation protein (HypE)
CEQ36_12505	COG0409	Hydrogenase expression formation protein
CEQ36_12510	COG0298	carbon dioxide binding
CEQ36_12515	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CEQ36_12520	COG0375	protein maturation
CEQ36_12525	COG1773	rubredoxin
CEQ36_12530	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CEQ36_12535	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
CEQ36_12540	COG5557	Pfam Polysulphide reductase, NrfD
CEQ36_12545	COG0437	4 iron, 4 sulfur cluster binding
CEQ36_12550	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
CEQ36_12555	COG3133	Outer membrane lipoprotein
CEQ36_12575	COG0840	transmembrane signaling receptor activity
CEQ36_12580	COG4592	Periplasmic binding protein
CEQ36_12585	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CEQ36_12590	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CEQ36_12595	COG1120	ATPase activity
CEQ36_12620	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ36_12625	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEQ36_12655	COG4964	Belongs to the GSP D family
CEQ36_12705	COG0848	biopolymer transport protein
CEQ36_12710	COG0811	peptide transport
CEQ36_12715	COG0626	cystathionine gamma-synthase activity
CEQ36_12720	COG0586	Pfam SNARE associated Golgi protein
CEQ36_12725	COG2207	Transcriptional regulator
CEQ36_12730	COG1979	alcohol dehydrogenase
CEQ36_12735	COG0656	L-ascorbic acid biosynthetic process
CEQ36_12755	COG2132	Multicopper oxidase
CEQ36_12760	COG0204	Acyl-transferase
CEQ36_12765	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CEQ36_12775	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CEQ36_12780	COG3715	PTS system
CEQ36_12785	COG3716	PTS system mannose fructose sorbose family IID component
CEQ36_12795	COG0583	DNA-binding transcription factor activity
CEQ36_12800	COG0667	Aldo Keto reductase
CEQ36_12805	COG1653	transport
CEQ36_12810	COG2205	protein histidine kinase activity
CEQ36_12815	COG0745	RESPONSE REGULATOR receiver
CEQ36_12820	COG2249	NAD(P)H dehydrogenase (quinone) activity
CEQ36_12825	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CEQ36_12835	COG0187	DNA topoisomerase II activity
CEQ36_12840	COG3150	esterase
CEQ36_12845	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CEQ36_12850	COG3151	Protein conserved in bacteria
CEQ36_12855	COG0494	nUDIX hydrolase
CEQ36_12860	COG1538	Outer membrane efflux protein
CEQ36_12865	COG5463	Belongs to the UPF0441 family
CEQ36_12870	COG0754	glutathionylspermidine amidase activity
CEQ36_12875	COG3384	dioxygenase
CEQ36_12880	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CEQ36_12890	COG0531	amino acid
CEQ36_12895	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
CEQ36_12895	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CEQ36_12900	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CEQ36_12905	COG3025	triphosphatase activity
CEQ36_12910	COG4991	sh3 domain protein
CEQ36_12915	COG0617	tRNA 3'-terminal CCA addition
CEQ36_12925	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CEQ36_12930	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CEQ36_12935	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CEQ36_12945	COG0358	DNA primase activity
CEQ36_12950	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CEQ36_12975	COG2003	Belongs to the UPF0758 family
CEQ36_12995	COG2378	regulation of single-species biofilm formation
CEQ36_13000	COG3596	GTP binding
CEQ36_13040	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEQ36_13050	COG1181	Belongs to the D-alanine--D-alanine ligase family
CEQ36_13110	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CEQ36_13160	COG3468	outer membrane autotransporter barrel domain protein
CEQ36_13165	COG2831	hemolysin activation secretion protein
CEQ36_13180	COG3316	Transposase and inactivated derivatives
CEQ36_13190	COG4983	Phage plasmid primase, P4 family domain protein
CEQ36_13270	COG2814	Major facilitator Superfamily
CEQ36_13285	COG2378	regulation of single-species biofilm formation
CEQ36_13295	COG0446	pyridine nucleotide-disulphide oxidoreductase
CEQ36_13295	COG1902	pentaerythritol trinitrate reductase activity
CEQ36_13300	COG2813	Specifically methylates the guanine in position
CEQ36_13305	COG3468	outer membrane autotransporter barrel domain protein
CEQ36_13310	COG1451	nucleotide metabolic process
CEQ36_13315	COG0673	inositol 2-dehydrogenase activity
CEQ36_13320	COG0861	Integral membrane protein TerC family
CEQ36_13325	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
CEQ36_13335	COG2721	sulfolactate sulfo-lyase activity
CEQ36_13340	COG0246	Mannitol dehydrogenase
CEQ36_13350	COG2271	Major facilitator Superfamily
CEQ36_13365	COG0586	Pfam SNARE associated Golgi protein
CEQ36_13380	COG4575	ribosome binding
CEQ36_13385	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
CEQ36_13395	COG2259	Doxx family
CEQ36_13400	COG0435	Glutathione S-transferase
CEQ36_13405	COG0583	DNA-binding transcription factor activity
CEQ36_13410	COG1741	Belongs to the pirin family
CEQ36_13415	COG1064	alcohol dehydrogenase
CEQ36_13430	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CEQ36_13445	COG0792	nuclease activity
CEQ36_13450	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CEQ36_13455	COG2823	Periplasmic or secreted lipoprotein
CEQ36_13460	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CEQ36_13465	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
CEQ36_13475	COG0784	Response regulator, receiver
CEQ36_13475	COG2198	Histidine kinase
CEQ36_13475	COG5002	protein histidine kinase activity
CEQ36_13480	COG1242	4 iron, 4 sulfur cluster binding
CEQ36_13485	COG0069	glutamate synthase activity
CEQ36_13485	COG0070	glutamate synthase
CEQ36_13485	COG0067	glutamate synthase
CEQ36_13490	COG0493	'glutamate synthase
CEQ36_13500	COG2969	positive regulation of protein catabolic process
CEQ36_13505	COG0625	glutathione transferase activity
CEQ36_13515	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CEQ36_13520	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CEQ36_13525	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CEQ36_13530	COG3105	Protein conserved in bacteria
CEQ36_13535	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CEQ36_13540	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CEQ36_13545	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CEQ36_13550	COG5007	Belongs to the BolA IbaG family
CEQ36_13555	COG3113	response to antibiotic
CEQ36_13560	COG2854	intermembrane phospholipid transfer
CEQ36_13565	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CEQ36_13570	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CEQ36_13575	COG1127	ABC transporter
CEQ36_13580	COG0530	calcium, potassium:sodium antiporter activity
CEQ36_13585	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CEQ36_13585	COG0517	IMP dehydrogenase activity
CEQ36_13590	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CEQ36_13595	COG3117	lipopolysaccharide transmembrane transporter activity
CEQ36_13600	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CEQ36_13605	COG1137	ATPase activity
CEQ36_13610	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CEQ36_13620	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CEQ36_13625	COG1660	Displays ATPase and GTPase activities
CEQ36_13630	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CEQ36_13635	COG2271	Major facilitator Superfamily
CEQ36_13640	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CEQ36_13645	COG0540	Belongs to the ATCase OTCase family
CEQ36_13650	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
CEQ36_13665	COG0366	Alpha amylase catalytic
CEQ36_13670	COG1263	PTS System
CEQ36_13670	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CEQ36_13680	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CEQ36_13690	COG3093	addiction module antidote protein HigA
CEQ36_13695	COG3711	transcriptional antiterminator
CEQ36_13695	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CEQ36_13710	COG3964	amidohydrolase
CEQ36_13740	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CEQ36_13745	COG3783	Cytochrome b(562)
CEQ36_13750	COG0312	modulator of DNA gyrase
CEQ36_13755	COG3028	Belongs to the UPF0307 family
CEQ36_13760	COG2732	(Barnase) inhibitor
CEQ36_13770	COG1012	belongs to the aldehyde dehydrogenase family
CEQ36_13775	COG1289	transmembrane transporter activity
CEQ36_13780	COG1566	PFAM secretion protein HlyD family protein
CEQ36_13790	COG0583	DNA-binding transcription factor activity
CEQ36_13795	COG0312	modulator of DNA gyrase
CEQ36_13800	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CEQ36_13805	COG3164	Protein of unknown function
CEQ36_13810	COG1530	ribonuclease E activity
CEQ36_13820	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
CEQ36_13825	COG1792	Involved in formation and maintenance of cell shape
CEQ36_13830	COG1077	Cell shape determining protein MreB Mrl
CEQ36_13835	COG2200	EAL domain
CEQ36_13835	COG2199	diguanylate cyclase activity
CEQ36_13840	COG0604	alcohol dehydrogenase
CEQ36_13850	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
CEQ36_13860	COG0511	ligase activity, forming carbon-carbon bonds
CEQ36_13865	COG0439	Biotin carboxylase
CEQ36_13870	COG3924	membrane
CEQ36_13875	COG4145	pantothenate transmembrane transporter activity
CEQ36_13880	COG2264	protein methyltransferase activity
CEQ36_13885	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CEQ36_13890	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
CEQ36_13895	COG3133	Outer membrane lipoprotein
CEQ36_13900	COG1278	Cold shock
CEQ36_13905	COG1278	Cold shock
CEQ36_13910	COG0471	metal ion transport
CEQ36_13920	COG1069	ribulokinase activity
CEQ36_13930	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEQ36_13935	COG1129	ABC transporter
CEQ36_13945	COG1560	Kdo2-lipid A biosynthetic process
CEQ36_13955	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEQ36_13960	COG4597	amino acid ABC transporter
CEQ36_13965	COG0765	amino acid transport
CEQ36_13970	COG1126	abc transporter atp-binding protein
CEQ36_13980	COG1380	Effector of murein hydrolase LrgA
CEQ36_13985	COG0583	DNA-binding transcription factor activity
CEQ36_13990	COG0025	NhaP-type Na H and K H
CEQ36_13995	COG2252	PERMEase
CEQ36_14015	COG0629	single-stranded DNA binding
CEQ36_14020	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CEQ36_14025	COG2315	Protein conserved in bacteria
CEQ36_14030	COG1448	Aminotransferase
CEQ36_14035	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CEQ36_14040	COG0305	Participates in initiation and elongation during chromosome replication
CEQ36_14045	COG0604	alcohol dehydrogenase
CEQ36_14055	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CEQ36_14060	COG0735	belongs to the Fur family
CEQ36_14065	COG3237	CsbD-like
CEQ36_14070	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CEQ36_14075	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CEQ36_14080	COG2937	Belongs to the GPAT DAPAT family
CEQ36_14090	COG3161	chorismate lyase activity
CEQ36_14100	COG4580	involved in the transport of maltose and maltodextrins
CEQ36_14120	COG1175	transmembrane transport
CEQ36_14125	COG3833	ABC-type maltose transport systems, permease component
CEQ36_14130	COG3223	Belongs to the PsiE family
CEQ36_14140	COG0527	aspartate kinase activity
CEQ36_14165	COG1414	Transcriptional regulator
CEQ36_14170	COG3852	Histidine kinase
CEQ36_14175	COG2204	response regulator
CEQ36_14180	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CEQ36_14185	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CEQ36_14190	COG2031	fatty acid transporter
CEQ36_14195	COG0183	Belongs to the thiolase family
CEQ36_14200	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
CEQ36_14205	COG2224	Isocitrate lyase
CEQ36_14210	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CEQ36_14215	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
CEQ36_14260	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CEQ36_14265	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CEQ36_14270	COG0009	L-threonylcarbamoyladenylate synthase
CEQ36_14275	COG0551	DNA topoisomerase type I activity
CEQ36_14285	COG0758	DNA mediated transformation
CEQ36_14290	COG0242	peptide deformylase activity
CEQ36_14295	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CEQ36_14300	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CEQ36_14300	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CEQ36_14305	COG0569	domain protein
CEQ36_14310	COG1970	mechanosensitive ion channel activity
CEQ36_14315	COG3036	rescue of stalled ribosome
CEQ36_14320	COG0789	Transcriptional regulator
CEQ36_14330	COG0203	ribosomal protein L17
CEQ36_14340	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CEQ36_14345	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CEQ36_14350	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CEQ36_14355	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CEQ36_14360	COG0201	protein transport
CEQ36_14365	COG0200	Binds to the 23S rRNA
CEQ36_14370	COG1841	ribosomal large subunit assembly
CEQ36_14375	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CEQ36_14380	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CEQ36_14385	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CEQ36_14390	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CEQ36_14395	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CEQ36_14405	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CEQ36_14410	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CEQ36_14415	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CEQ36_14420	COG0255	Belongs to the universal ribosomal protein uL29 family
CEQ36_14425	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CEQ36_14430	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CEQ36_14440	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CEQ36_14450	COG0089	rRNA binding
CEQ36_14465	COG0051	transcription antitermination factor activity, RNA binding
CEQ36_14480	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CEQ36_14495	COG0049	tRNA binding
CEQ36_14500	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CEQ36_14505	COG2168	tRNA wobble position uridine thiolation
CEQ36_14510	COG2923	Belongs to the DsrF TusC family
CEQ36_14515	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
CEQ36_14520	COG2964	Protein conserved in bacteria
CEQ36_14525	COG0545	Peptidyl-prolyl cis-trans isomerase
CEQ36_14535	COG1047	Peptidyl-prolyl cis-trans
CEQ36_14540	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
CEQ36_14550	COG2249	NAD(P)H dehydrogenase (quinone) activity
CEQ36_14555	COG0488	(ABC) transporter
CEQ36_14560	COG1216	Glycosyl transferase, family 2
CEQ36_14570	COG2175	clavaminate synthase activity
CEQ36_14575	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CEQ36_14585	COG4521	taurine ABC transporter
CEQ36_14600	COG0429	hydrolase of the alpha beta-hydrolase fold
CEQ36_14605	COG3089	Belongs to the UPF0270 family
CEQ36_14610	COG3954	Phosphoribulokinase
CEQ36_14615	COG1765	OsmC-like protein
CEQ36_14625	COG1289	transmembrane transporter activity
CEQ36_14640	COG0433	COG0433 Predicted ATPase
CEQ36_14645	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CEQ36_14655	COG1486	melibiose metabolic process
CEQ36_14660	COG1609	Transcriptional regulator
CEQ36_14675	COG0738	Major facilitator superfamily
CEQ36_14680	COG0402	S-adenosylhomocysteine deaminase activity
CEQ36_14685	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CEQ36_14690	COG2146	nitrite reductase [NAD(P)H] activity
CEQ36_14700	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CEQ36_14700	COG1648	precorrin-2 dehydrogenase activity
CEQ36_14705	COG0180	Tryptophanyl-tRNA synthetase
CEQ36_14715	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CEQ36_14740	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CEQ36_14745	COG4796	Type ii and iii secretion system protein
CEQ36_14770	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CEQ36_14775	COG0494	nUDIX hydrolase
CEQ36_14785	COG1011	Hydrolase
CEQ36_14790	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CEQ36_14820	COG0745	RESPONSE REGULATOR receiver
CEQ36_14825	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CEQ36_14830	COG2183	response to ionizing radiation
CEQ36_14835	COG1918	ferrous iron import across plasma membrane
CEQ36_14855	COG0596	Alpha beta hydrolase
CEQ36_14865	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CEQ36_14865	COG0316	Belongs to the HesB IscA family
CEQ36_14875	COG1640	4-alpha-glucanotransferase
CEQ36_14880	COG0058	SHG alpha-glucan phosphorylase activity
CEQ36_14885	COG2909	trisaccharide binding
CEQ36_14895	COG0705	Rhomboid family
CEQ36_14900	COG1349	DNA-binding transcription factor activity
CEQ36_14905	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CEQ36_14910	COG0058	SHG alpha-glucan phosphorylase activity
CEQ36_14915	COG0297	glycogen (starch) synthase activity
CEQ36_14920	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CEQ36_14925	COG1523	belongs to the glycosyl hydrolase 13 family
CEQ36_14930	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CEQ36_14935	COG3275	phosphorelay sensor kinase activity
CEQ36_14955	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CEQ36_14960	COG2095	MarC family integral membrane protein
CEQ36_14965	COG3265	gluconokinase activity
CEQ36_14970	COG2610	gluconate transmembrane transporter activity
CEQ36_14975	COG1609	Transcriptional regulator
CEQ36_14980	COG1741	Belongs to the pirin family
CEQ36_14985	COG1247	-acetyltransferase
CEQ36_14990	COG1082	Xylose isomerase domain protein TIM barrel
CEQ36_14995	COG0673	inositol 2-dehydrogenase activity
CEQ36_15000	COG3962	Belongs to the TPP enzyme family
CEQ36_15015	COG3718	enzyme involved in inositol metabolism
CEQ36_15030	COG2814	Major facilitator Superfamily
CEQ36_15035	COG0583	DNA-binding transcription factor activity
CEQ36_15050	COG2081	HI0933 family
CEQ36_15055	COG0306	phosphate transporter
CEQ36_15065	COG0589	response to stress
CEQ36_15075	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
CEQ36_15080	COG0742	ribosomal rna small subunit methyltransferase
CEQ36_15095	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CEQ36_15100	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CEQ36_15125	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CEQ36_15190	COG1295	ribonuclease BN
CEQ36_15195	COG2134	cdp-diacylglycerol pyrophosphatase
CEQ36_15200	COG2982	Protein involved in outer membrane biogenesis
CEQ36_15205	COG2200	EAL domain
CEQ36_15210	COG1942	4-Oxalocrotonate Tautomerase
CEQ36_15215	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CEQ36_15220	COG0612	Peptidase, M16
CEQ36_15225	COG1301	dicarboxylic acid transport
CEQ36_15240	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CEQ36_15250	COG3188	usher protein
CEQ36_15255	COG3121	Chaperone
CEQ36_15275	COG2200	EAL domain
CEQ36_15275	COG2199	diguanylate cyclase activity
CEQ36_15280	COG3118	belongs to the thioredoxin family
CEQ36_15280	COG0457	Tetratricopeptide repeat
CEQ36_15285	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CEQ36_15290	COG1215	transferase activity, transferring glycosyl groups
CEQ36_15300	COG1192	Involved in chromosome partitioning
CEQ36_15320	COG2194	sulfuric ester hydrolase activity
CEQ36_15325	COG4608	Belongs to the ABC transporter superfamily
CEQ36_15330	COG0444	Belongs to the ABC transporter superfamily
CEQ36_15335	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CEQ36_15340	COG0601	transmembrane transport
CEQ36_15345	COG0747	negative chemotaxis
CEQ36_15360	COG2271	Major facilitator Superfamily
CEQ36_15365	COG3851	Histidine kinase
CEQ36_15370	COG2197	response regulator
CEQ36_15375	COG2194	sulfuric ester hydrolase activity
CEQ36_15380	COG1764	response to oxidative stress
CEQ36_15400	COG2986	histidine ammonia-lyase
CEQ36_15405	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
CEQ36_15420	COG2207	Transcriptional regulator
CEQ36_15420	COG1609	Transcriptional regulator
CEQ36_15425	COG4214	carbohydrate transport
CEQ36_15435	COG4213	ABC transporter substrate-binding protein
CEQ36_15440	COG2115	Belongs to the xylose isomerase family
CEQ36_15445	COG1070	Carbohydrate kinase
CEQ36_15455	COG3121	Chaperone
CEQ36_15460	COG3188	usher protein
CEQ36_15475	COG1335	isochorismatase
CEQ36_15485	COG3274	enterobacterial common antigen metabolic process
CEQ36_15495	COG3276	selenocysteine insertion sequence binding
CEQ36_15500	COG1921	L-seryl-tRNASec selenium transferase activity
CEQ36_15505	COG3058	Necessary for formate dehydrogenase activity
CEQ36_15510	COG2864	formate dehydrogenase
CEQ36_15515	COG0437	4 iron, 4 sulfur cluster binding
CEQ36_15525	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CEQ36_15530	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CEQ36_15535	COG0840	transmembrane signaling receptor activity
CEQ36_15540	COG2258	MOSC domain
CEQ36_15545	COG3077	Addiction module antitoxin, RelB DinJ family
CEQ36_15560	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEQ36_15570	COG3722	fumarate hydratase activity
CEQ36_15575	COG0246	Mannitol dehydrogenase
CEQ36_15580	COG2213	PTS system mannitol-specific
CEQ36_15580	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CEQ36_15595	COG0751	glycine-tRNA ligase activity
CEQ36_15605	COG2818	Glycosylase
CEQ36_15610	COG0456	acetyltransferase
CEQ36_15625	COG2885	chlorophyll binding
CEQ36_15645	COG0366	Alpha amylase catalytic
CEQ36_15650	COG3977	Valine--pyruvate aminotransferase
CEQ36_15670	COG5645	(Lipo)protein
CEQ36_15675	COG0823	Involved in the tonB-independent uptake of proteins
CEQ36_15680	COG2271	Major facilitator Superfamily
CEQ36_15685	COG4948	Mandelate Racemase Muconate Lactonizing
CEQ36_15690	COG0800	Aldolase
CEQ36_15695	COG3734	2-keto-3-deoxy-galactonokinase
CEQ36_15700	COG2186	Transcriptional regulator
CEQ36_15710	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CEQ36_15715	COG2423	ornithine cyclodeaminase activity
CEQ36_15720	COG2188	Transcriptional regulator
CEQ36_15725	COG2723	6-phospho-beta-galactosidase activity
CEQ36_15735	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CEQ36_15740	COG1940	carbohydrate kinase activity
CEQ36_15750	COG1447	Phosphotransferase system cellobiose-specific component IIA
CEQ36_15755	COG0561	phosphatase activity
CEQ36_15760	COG0187	DNA topoisomerase II activity
CEQ36_15770	COG0592	DNA-directed DNA polymerase activity
CEQ36_15775	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CEQ36_15785	COG0230	Belongs to the bacterial ribosomal protein bL34 family
CEQ36_15790	COG0594	ribonuclease P activity
CEQ36_15800	COG0706	membrane insertase activity
CEQ36_15805	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CEQ36_15810	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CEQ36_15820	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CEQ36_15825	COG2011	ABC-type metal ion transport system permease component
CEQ36_15830	COG0840	transmembrane signaling receptor activity
CEQ36_15835	COG0431	NADPH-dependent FMN reductase
CEQ36_15840	COG4191	Histidine kinase
CEQ36_15860	COG2252	PERMEase
CEQ36_15865	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CEQ36_15870	COG0765	amino acid transport
CEQ36_15880	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEQ36_15890	COG0704	Plays a role in the regulation of phosphate uptake
CEQ36_15900	COG0581	inorganic phosphate transmembrane transporter activity
CEQ36_15905	COG0573	inorganic phosphate transmembrane transporter activity
CEQ36_15915	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CEQ36_15960	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CEQ36_15965	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CEQ36_15970	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CEQ36_15975	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CEQ36_15985	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CEQ36_15990	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CEQ36_15995	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CEQ36_16010	COG0356	it plays a direct role in the translocation of protons across the membrane
CEQ36_16015	COG3312	ion transport
CEQ36_16020	COG0357	Ribosomal RNA small subunit methyltransferase G
CEQ36_16025	COG0445	tRNA wobble uridine modification
CEQ36_16030	COG0716	FMN binding
CEQ36_16035	COG1522	sequence-specific DNA binding
CEQ36_16040	COG2502	aspartate--ammonia ligase
CEQ36_16050	COG2425	protein containing a von Willebrand factor type A (vWA) domain
CEQ36_16055	COG0714	Associated with various cellular activities
CEQ36_16060	COG3158	transport of potassium into the cell
CEQ36_16065	COG1869	D-ribose catabolic process
CEQ36_16075	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEQ36_16080	COG1879	ABC-type sugar transport system periplasmic component
CEQ36_16085	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CEQ36_16090	COG1609	Transcriptional regulator
CEQ36_16095	COG0477	Major facilitator Superfamily
CEQ36_16100	COG2186	Transcriptional regulator
CEQ36_16130	COG1763	Mo-molybdopterin cofactor biosynthetic process
CEQ36_16140	COG3084	Protein conserved in bacteria
CEQ36_16145	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CEQ36_16150	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CEQ36_16155	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CEQ36_16155	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CEQ36_16160	COG0218	Necessary for normal cell division and for the maintenance of normal septation
CEQ36_16175	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CEQ36_16185	COG3852	Histidine kinase
CEQ36_16195	COG0174	glutamine synthetase
CEQ36_16205	COG1011	Hydrolase
CEQ36_16210	COG1295	ribonuclease BN
CEQ36_16215	COG1490	D-aminoacyl-tRNA deacylase activity
CEQ36_16220	COG0456	acetyltransferase
CEQ36_16225	COG2204	response regulator
CEQ36_16240	COG3423	Transcriptional regulator
CEQ36_16250	COG2982	Protein involved in outer membrane biogenesis
CEQ36_16255	COG2233	PERMEase
CEQ36_16260	COG0786	glutamate:sodium symporter activity
CEQ36_16265	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CEQ36_16270	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CEQ36_16275	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CEQ36_16280	COG1758	RNA polymerase activity
CEQ36_16290	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CEQ36_16295	COG2860	membrane
CEQ36_16305	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CEQ36_16310	COG1024	Enoyl-CoA hydratase
CEQ36_16315	COG5001	Diguanylate cyclase
CEQ36_16335	COG3645	SOS response
CEQ36_16340	COG1561	YicC-like family, N-terminal region
CEQ36_16345	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CEQ36_16350	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CEQ36_16355	COG1309	transcriptional regulator
CEQ36_16360	COG0756	dUTP diphosphatase activity
CEQ36_16365	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CEQ36_16380	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CEQ36_16385	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CEQ36_16395	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CEQ36_16405	COG1519	Transferase
CEQ36_16410	COG0859	PFAM glycosyl transferase family 9
CEQ36_16415	COG0859	PFAM glycosyl transferase family 9
CEQ36_16420	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CEQ36_16425	COG0156	8-amino-7-oxononanoate synthase activity
CEQ36_16435	COG2861	carbohydrate metabolic process
CEQ36_16440	COG4942	peptidase
CEQ36_16445	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CEQ36_16450	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CEQ36_16455	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CEQ36_16460	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
CEQ36_16465	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CEQ36_16470	COG1045	serine acetyltransferase
CEQ36_16475	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CEQ36_16480	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CEQ36_16480	COG2169	Transcriptional regulator
CEQ36_16485	COG2205	protein histidine kinase activity
CEQ36_16490	COG0745	RESPONSE REGULATOR receiver
CEQ36_16495	COG3678	ATP-independent chaperone mediated protein folding
CEQ36_16510	COG4679	PFAM Phage derived protein Gp49-like (DUF891)
CEQ36_16525	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CEQ36_16535	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CEQ36_16550	COG3152	Membrane
CEQ36_16560	COG2814	Major facilitator Superfamily
CEQ36_16565	COG1494	fructose-1,6-bisphosphatase
CEQ36_16570	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CEQ36_16575	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CEQ36_16590	COG3074	FtsZ-dependent cytokinesis
CEQ36_16600	COG1575	Belongs to the MenA family. Type 1 subfamily
CEQ36_16605	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CEQ36_16610	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CEQ36_16615	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CEQ36_16620	COG1609	Transcriptional regulator
CEQ36_16625	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CEQ36_16630	COG0254	rRNA binding
CEQ36_16635	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
CEQ36_16640	COG0626	cystathionine gamma-synthase activity
CEQ36_16645	COG0460	homoserine dehydrogenase
CEQ36_16645	COG0527	aspartate kinase activity
CEQ36_16655	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CEQ36_16665	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CEQ36_16675	COG0165	Argininosuccinate lyase
CEQ36_16725	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CEQ36_16730	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CEQ36_16730	COG0678	peroxiredoxin activity
CEQ36_16740	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CEQ36_16755	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CEQ36_16765	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CEQ36_16810	COG1879	ABC-type sugar transport system periplasmic component
CEQ36_16815	COG1129	ABC transporter
CEQ36_16820	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEQ36_16825	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEQ36_16830	COG0583	DNA-binding transcription factor activity
CEQ36_16835	COG3085	chromosome segregation
CEQ36_16860	COG3978	acetolactate synthase activity
CEQ36_16865	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CEQ36_16875	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CEQ36_16885	COG0583	DNA-binding transcription factor activity
CEQ36_16890	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CEQ36_16900	COG3121	Chaperone
CEQ36_16915	COG3121	Chaperone
CEQ36_16925	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CEQ36_16940	COG0248	Ppx GppA phosphatase
CEQ36_16950	COG3118	belongs to the thioredoxin family
CEQ36_16955	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CEQ36_16960	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CEQ36_16965	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
CEQ36_16970	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CEQ36_16975	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CEQ36_16980	COG1088	dTDP-glucose 4,6-dehydratase activity
CEQ36_16985	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CEQ36_16990	COG0456	acetyltransferase
CEQ36_16995	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CEQ36_17000	COG2244	polysaccharide biosynthetic process
CEQ36_17005	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CEQ36_17020	COG1113	amino acid transport
CEQ36_17050	COG3071	HemY protein
CEQ36_17055	COG2959	enzyme of heme biosynthesis
CEQ36_17060	COG1587	Uroporphyrinogen-III synthase
CEQ36_17065	COG0181	hydroxymethylbilane synthase activity
CEQ36_17070	COG3072	Adenylate cyclase
CEQ36_17080	COG5567	small periplasmic lipoprotein
CEQ36_17085	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CEQ36_17090	COG3159	Protein conserved in bacteria
CEQ36_17095	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CEQ36_17100	COG1011	Hydrolase
CEQ36_17105	COG0210	DNA helicase
CEQ36_17115	COG5441	Belongs to the UPF0261 family
CEQ36_17120	COG5564	TIM-barrel signal transduction protein
CEQ36_17130	COG0598	Magnesium transport protein CorA
CEQ36_17140	COG2050	protein possibly involved in aromatic compounds catabolism
CEQ36_17145	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
CEQ36_17150	COG0514	ATP-dependent DNA helicase (RecQ)
CEQ36_17155	COG1280	lysine exporter protein (LysE YggA)
CEQ36_17160	COG1280	lysine exporter protein (LysE YggA)
CEQ36_17165	COG2267	carboxylic ester hydrolase activity
CEQ36_17170	COG0561	phosphatase activity
CEQ36_17175	COG0584	glycerophosphoryl diester phosphodiesterase
CEQ36_17180	COG2271	Major facilitator Superfamily
CEQ36_17185	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CEQ36_17190	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
CEQ36_17195	COG0247	lactate metabolic process
CEQ36_17205	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CEQ36_17210	COG0425	Belongs to the sulfur carrier protein TusA family
CEQ36_17215	COG2217	Heavy metal translocating P-type atpase
CEQ36_17220	COG3714	YhhN family
CEQ36_17235	COG3776	membrane
CEQ36_17240	COG0742	ribosomal rna small subunit methyltransferase
CEQ36_17245	COG0552	protein localization to endoplasmic reticulum
CEQ36_17250	COG2884	Cell division ATP-binding protein ftsE
CEQ36_17255	COG2177	Part of the ABC transporter FtsEX involved in
CEQ36_17265	COG0456	acetyltransferase
CEQ36_17270	COG0683	leucine binding
CEQ36_17275	COG0559	Belongs to the binding-protein-dependent transport system permease family
CEQ36_17280	COG4177	L-phenylalanine transmembrane transporter activity
CEQ36_17285	COG0411	ABC transporter
CEQ36_17290	COG0410	ABC transporter
CEQ36_17325	COG1653	transport
CEQ36_17330	COG1175	transmembrane transport
CEQ36_17335	COG0395	ABC-type sugar transport system, permease component
CEQ36_17340	COG3842	ATPase activity
CEQ36_17345	COG0584	glycerophosphoryl diester phosphodiesterase
CEQ36_17350	COG0679	Auxin Efflux Carrier
CEQ36_17360	COG0583	DNA-binding transcription factor activity
CEQ36_17365	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CEQ36_17370	COG0412	Dienelactone hydrolase
CEQ36_17375	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
CEQ36_17385	COG1966	Carbon starvation protein
CEQ36_17390	COG0586	Pfam SNARE associated Golgi protein
CEQ36_17395	COG1322	Protein conserved in bacteria
CEQ36_17400	COG2226	methyltransferase
CEQ36_17405	COG3165	ubiquinone biosynthetic process from chorismate
CEQ36_17410	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CEQ36_17415	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CEQ36_17420	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CEQ36_17425	COG0805	protein transport
CEQ36_17445	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CEQ36_17455	COG0183	Belongs to the thiolase family
CEQ36_17460	COG1024	Enoyl-CoA hydratase
CEQ36_17460	COG1250	3-hydroxyacyl-CoA dehydrogenase
CEQ36_17470	COG1739	Uncharacterized protein family UPF0029
CEQ36_17475	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CEQ36_17515	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
CEQ36_17515	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
CEQ36_17520	COG1072	(Pantothenic acid kinase))
CEQ36_17560	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CEQ36_17565	COG0250	Participates in transcription elongation, termination and antitermination
CEQ36_17570	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CEQ36_17575	COG0081	regulation of translation
CEQ36_17580	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CEQ36_17585	COG0222	ribosome binding
CEQ36_17590	COG0085	RNA polymerase activity
CEQ36_17595	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CEQ36_17605	COG2022	thiamine diphosphate biosynthetic process
CEQ36_17610	COG2104	thiamine diphosphate biosynthetic process
CEQ36_17615	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CEQ36_17625	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CEQ36_17630	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
CEQ36_17635	COG2816	NAD+ diphosphatase activity
CEQ36_17640	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CEQ36_17645	COG1515	deoxyribonuclease V activity
CEQ36_17650	COG3068	Protein conserved in bacteria
CEQ36_17665	COG0151	Belongs to the GarS family
CEQ36_17670	COG0138	bifunctional purine biosynthesis protein purh
CEQ36_17710	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CEQ36_17715	COG3162	membrane
CEQ36_17720	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CEQ36_17725	COG1301	dicarboxylic acid transport
CEQ36_17810	COG3264	Mechanosensitive ion channel
CEQ36_17810	COG1511	domain protein
CEQ36_17815	COG4774	siderophore transport
CEQ36_17825	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEQ36_17830	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CEQ36_17835	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CEQ36_17840	COG4558	Periplasmic binding protein
CEQ36_17845	COG3720	iron ion transport
CEQ36_17860	COG0488	(ABC) transporter
CEQ36_17870	COG0814	amino acid
CEQ36_17875	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CEQ36_17880	COG1882	Formate acetyltransferase
CEQ36_17885	COG0840	transmembrane signaling receptor activity
CEQ36_17895	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CEQ36_17895	COG1263	PTS System
CEQ36_17900	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CEQ36_17910	COG1472	Belongs to the glycosyl hydrolase 3 family
CEQ36_17920	COG3876	Protein conserved in bacteria
CEQ36_17930	COG1309	transcriptional regulator
CEQ36_17940	COG2084	Dehydrogenase
CEQ36_17945	COG1929	Belongs to the glycerate kinase type-1 family
CEQ36_17950	COG3835	regulator
CEQ36_17955	COG2721	sulfolactate sulfo-lyase activity
CEQ36_17960	COG2271	Major facilitator Superfamily
CEQ36_17965	COG0493	'glutamate synthase
CEQ36_17965	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CEQ36_17970	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CEQ36_17975	COG3383	formate dehydrogenase (NAD+) activity
CEQ36_17980	COG4232	protein-disulfide reductase activity
CEQ36_17990	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CEQ36_18005	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CEQ36_18010	COG0459	protein refolding
CEQ36_18035	COG2076	Multidrug Resistance protein
CEQ36_18045	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
CEQ36_18050	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
CEQ36_18055	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CEQ36_18060	COG1053	succinate dehydrogenase
CEQ36_18065	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
CEQ36_18070	COG1511	domain protein
CEQ36_18070	COG3264	Mechanosensitive ion channel
CEQ36_18075	COG0688	phosphatidylethanolamine metabolic process
CEQ36_18080	COG1162	GTPase activity
CEQ36_18085	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
CEQ36_18110	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CEQ36_18115	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CEQ36_18115	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CEQ36_18120	COG0802	atpase or kinase
CEQ36_18125	COG0860	N-Acetylmuramoyl-L-alanine amidase
CEQ36_18130	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CEQ36_18135	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CEQ36_18145	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CEQ36_18150	COG0330	HflC and HflK could
CEQ36_18155	COG0330	HflC and HflK could
CEQ36_18160	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
CEQ36_18165	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CEQ36_18170	COG1959	2 iron, 2 sulfur cluster binding
CEQ36_18175	COG0557	exoribonuclease II activity
CEQ36_18180	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CEQ36_18190	COG1960	acyl-CoA dehydrogenase activity
CEQ36_18195	COG3650	response to hydrogen peroxide
CEQ36_18200	COG1073	alpha beta
CEQ36_18220	COG0360	Binds together with S18 to 16S ribosomal RNA
CEQ36_18225	COG2965	DNA replication, synthesis of RNA primer
CEQ36_18230	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CEQ36_18235	COG0359	binds to the 23S rRNA
CEQ36_18245	COG3061	Opacity-associated protein A
CEQ36_18250	COG0545	Peptidyl-prolyl cis-trans isomerase
CEQ36_18260	COG0737	Belongs to the 5'-nucleotidase family
CEQ36_18265	COG1218	3'(2'),5'-bisphosphate nucleotidase
CEQ36_18270	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
CEQ36_18280	COG1253	flavin adenine dinucleotide binding
CEQ36_18285	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CEQ36_18290	COG0729	surface antigen
CEQ36_18295	COG2911	Protein conserved in bacteria
CEQ36_18300	COG2105	PFAM AIG2 family protein
CEQ36_18305	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CEQ36_18310	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
CEQ36_18315	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CEQ36_18340	COG3423	Transcriptional regulator
CEQ36_18355	COG0142	geranyltranstransferase activity
CEQ36_18370	COG0697	spore germination
CEQ36_18375	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CEQ36_18380	COG0642	Histidine kinase
CEQ36_18385	COG0745	RESPONSE REGULATOR receiver
CEQ36_18390	COG2027	D-alanyl-D-alanine carboxypeptidase
CEQ36_18395	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CEQ36_18400	COG1534	Rna-binding protein
CEQ36_18405	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
CEQ36_18410	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CEQ36_18415	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CEQ36_18425	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CEQ36_18445	COG0195	Participates in both transcription termination and antitermination
CEQ36_18455	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CEQ36_18460	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CEQ36_18470	COG1185	polyribonucleotide nucleotidyltransferase activity
CEQ36_18485	COG0513	Belongs to the DEAD box helicase family
CEQ36_18490	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CEQ36_18510	COG3153	acetyltransferase
CEQ36_18515	COG2827	Endonuclease containing a URI domain
CEQ36_18520	COG0531	amino acid
CEQ36_18525	COG1982	Orn Lys Arg decarboxylase major
CEQ36_18530	COG3787	Belongs to the UPF0306 family
CEQ36_18535	COG0702	epimerase
CEQ36_18540	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CEQ36_18545	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
CEQ36_18550	COG3454	Phosphonate metabolism
CEQ36_18555	COG4778	phosphonate C-P lyase system protein PhnL
CEQ36_18560	COG4107	phosphonate C-P lyase system protein PhnK
CEQ36_18565	COG3627	carbon phosphorus lyase activity
CEQ36_18570	COG3626	phosphonate metabolism
CEQ36_18575	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
CEQ36_18580	COG3624	Phosphonate C-P lyase system protein PhnG
CEQ36_18585	COG2188	Transcriptional regulator
CEQ36_18605	COG0583	DNA-binding transcription factor activity
CEQ36_18610	COG2249	NAD(P)H dehydrogenase (quinone) activity
CEQ36_18615	COG4608	Belongs to the ABC transporter superfamily
CEQ36_18620	COG0444	Belongs to the ABC transporter superfamily
CEQ36_18630	COG0601	transmembrane transport
CEQ36_18640	COG2731	YhcH YjgK YiaL family protein
CEQ36_18650	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
CEQ36_18665	COG2927	DNA polymerase III (CHI subunit)
CEQ36_18670	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CEQ36_18675	COG0795	lipopolysaccharide-transporting ATPase activity
CEQ36_18680	COG0795	lipopolysaccharide-transporting ATPase activity
CEQ36_18690	COG0582	viral genome integration into host DNA
CEQ36_18755	COG4983	Phage plasmid primase, P4 family domain protein
CEQ36_18770	COG3596	GTP binding
CEQ36_18805	COG2003	Belongs to the UPF0758 family
CEQ36_18870	COG1388	LysM domain
CEQ36_18870	COG1470	cell adhesion involved in biofilm formation
CEQ36_18890	COG3188	usher protein
CEQ36_18895	COG3121	Chaperone
CEQ36_18990	COG3210	domain, Protein
CEQ36_19075	COG3210	domain, Protein
CEQ36_19100	COG2831	hemolysin activation secretion protein
CEQ36_19125	COG2249	NAD(P)H dehydrogenase (quinone) activity
CEQ36_19140	COG3272	Protein of unknown function (DUF1722)
CEQ36_19165	COG0642	Histidine kinase
CEQ36_19175	COG1830	Aldolase
CEQ36_19180	COG1879	ABC-type sugar transport system periplasmic component
CEQ36_19185	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEQ36_19190	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEQ36_19195	COG1129	ABC transporter
CEQ36_19200	COG2390	Transcriptional regulator
CEQ36_19205	COG1070	Carbohydrate kinase
CEQ36_19210	COG0859	PFAM glycosyl transferase family 9
CEQ36_19225	COG2235	arginine
CEQ36_19240	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ36_19245	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEQ36_19255	COG2376	Dihydroxyacetone kinase
CEQ36_19260	COG1461	Dihydroxyacetone kinase
CEQ36_19265	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CEQ36_19265	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CEQ36_19265	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
CEQ36_19275	COG2192	nodulation
CEQ36_19335	COG3706	GGDEF domain
CEQ36_19365	COG0667	Aldo Keto reductase
CEQ36_19375	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
CEQ36_19380	COG0456	acetyltransferase
CEQ36_19385	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CEQ36_19390	COG2823	Periplasmic or secreted lipoprotein
CEQ36_19400	COG4667	esterase of the alpha-beta hydrolase superfamily
CEQ36_19405	COG0084	hydrolase, TatD family'
CEQ36_19410	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CEQ36_19415	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CEQ36_19420	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CEQ36_19425	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
CEQ36_19440	COG3550	peptidyl-serine autophosphorylation
CEQ36_19445	COG3726	membrane protein affecting hemolysin expression
CEQ36_19455	COG0560	Phosphoserine phosphatase
CEQ36_19470	COG0604	alcohol dehydrogenase
CEQ36_19485	COG1454	alcohol dehydrogenase
CEQ36_19525	COG0488	(ABC) transporter
CEQ36_19535	COG2885	chlorophyll binding
CEQ36_19540	COG2199	diguanylate cyclase activity
CEQ36_19550	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CEQ36_19555	COG0741	lytic transglycosylase activity
CEQ36_19560	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
CEQ36_19565	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
CEQ36_19575	COG3708	Transcriptional regulator
CEQ36_19575	COG2207	Transcriptional regulator
CEQ36_19580	COG3045	CreA protein
CEQ36_19585	COG0745	RESPONSE REGULATOR receiver
CEQ36_19600	COG0083	homoserine kinase activity
CEQ36_19610	COG3022	response to hydroperoxide
CEQ36_19615	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CEQ36_19620	COG0521	Mo-molybdopterin cofactor biosynthetic process
CEQ36_19635	COG1584	GPR1 FUN34 yaaH family protein
CEQ36_19645	COG0484	heat shock protein binding
CEQ36_19650	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CEQ36_19655	COG0583	DNA-binding transcription factor activity
CEQ36_19670	COG0196	riboflavin kinase activity
CEQ36_19675	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CEQ36_19680	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CEQ36_19685	COG1047	Peptidyl-prolyl cis-trans
CEQ36_19690	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CEQ36_19700	COG0505	Belongs to the CarA family
CEQ36_19705	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CEQ36_19710	COG1280	lysine exporter protein (LysE YggA)
CEQ36_19715	COG2966	Psort location CytoplasmicMembrane, score
CEQ36_19725	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CEQ36_19730	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CEQ36_19735	COG2967	ApaG domain
CEQ36_19740	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CEQ36_19750	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CEQ36_19755	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CEQ36_19760	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CEQ36_19765	COG0564	pseudouridine synthase activity
CEQ36_19770	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CEQ36_19775	COG0417	DNA replication proofreading
CEQ36_19785	COG0586	Pfam SNARE associated Golgi protein
CEQ36_19795	COG1178	ABC-type Fe3 transport system permease component
CEQ36_19800	COG4143	(ABC) transporter
CEQ36_19810	COG4533	DNA binding
CEQ36_19815	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CEQ36_19825	COG2814	Major facilitator Superfamily
CEQ36_19830	COG0814	amino acid
CEQ36_19835	COG3033	Beta-eliminating lyase
CEQ36_19850	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CEQ36_19855	COG0473	3-isopropylmalate dehydrogenase activity
CEQ36_19860	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CEQ36_19865	COG0583	DNA-binding transcription factor activity
CEQ36_19870	COG1022	Amp-dependent synthetase and ligase
CEQ36_19875	COG0028	Belongs to the TPP enzyme family
CEQ36_19885	COG1609	Transcriptional regulator
CEQ36_19900	COG0275	rRNA processing
CEQ36_19905	COG3116	cell division
CEQ36_19910	COG0768	penicillin binding
CEQ36_19915	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CEQ36_19920	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CEQ36_19925	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CEQ36_19935	COG0772	Belongs to the SEDS family
CEQ36_19940	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CEQ36_19945	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CEQ36_19955	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CEQ36_19960	COG0849	cell division
CEQ36_19965	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CEQ36_19990	COG0653	protein targeting
CEQ36_19995	COG0494	nUDIX hydrolase
CEQ36_20000	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
CEQ36_20010	COG0237	dephospho-CoA kinase activity
CEQ36_20020	COG0516	GMP reductase activity
CEQ36_20025	COG1459	type II secretion system
CEQ36_20030	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CEQ36_20035	COG4969	Belongs to the N-Me-Phe pilin family
CEQ36_20050	COG3725	Membrane protein required for beta-lactamase induction
CEQ36_20055	COG1113	amino acid transport
CEQ36_20065	COG2186	Transcriptional regulator
CEQ36_20070	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CEQ36_20075	COG0508	dehydrogenase complex catalyzes the overall conversion of
CEQ36_20080	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CEQ36_20100	COG1049	propionate catabolic process, 2-methylcitrate cycle
CEQ36_20105	COG3112	Uncharacterised protein family (UPF0231)
CEQ36_20115	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CEQ36_20120	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CEQ36_20130	COG2132	Multicopper oxidase
CEQ36_20135	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CEQ36_20140	COG0288	reversible hydration of carbon dioxide
CEQ36_20145	COG1131	(ABC) transporter
CEQ36_20150	COG0842	Transport permease protein
CEQ36_20155	COG0726	polysaccharide deacetylase
CEQ36_20160	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
CEQ36_20170	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CEQ36_20175	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CEQ36_20180	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CEQ36_20185	COG0617	tRNA 3'-terminal CCA addition
CEQ36_20195	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CEQ36_20200	COG1489	DNA binding
CEQ36_20205	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CEQ36_20210	COG1643	Atp-dependent helicase
CEQ36_20215	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CEQ36_20220	COG1120	ATPase activity
CEQ36_20225	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CEQ36_20230	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CEQ36_20235	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CEQ36_20245	COG0316	Belongs to the HesB IscA family
CEQ36_20250	COG2860	membrane
CEQ36_20260	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CEQ36_20265	COG0232	Belongs to the dGTPase family. Type 2 subfamily
CEQ36_20270	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CEQ36_20280	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CEQ36_20285	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CEQ36_20290	COG3956	TIGRFAM MazG family protein
CEQ36_20295	COG0504	CTP synthase activity
CEQ36_20300	COG0148	phosphopyruvate hydratase activity
CEQ36_20310	COG0602	queuosine metabolic process
CEQ36_20315	COG0720	synthase
CEQ36_20320	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CEQ36_20325	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CEQ36_20330	COG0175	sulfate reduction
CEQ36_20350	COG2234	aminopeptidase activity
CEQ36_20355	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CEQ36_20355	COG1648	precorrin-2 dehydrogenase activity
CEQ36_20360	COG0175	sulfate reduction
CEQ36_20365	COG2895	sulfate adenylyltransferase (ATP) activity
CEQ36_20370	COG0529	Catalyzes the synthesis of activated sulfate
CEQ36_20385	COG0765	amino acid transport
CEQ36_20395	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CEQ36_20405	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CEQ36_20410	COG0585	pseudouridine synthase activity
CEQ36_20415	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
CEQ36_20420	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CEQ36_20425	COG1388	LysM domain
CEQ36_20425	COG4942	peptidase
CEQ36_20430	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CEQ36_20435	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CEQ36_20460	COG0084	hydrolase, TatD family'
CEQ36_20530	COG1196	nuclear chromosome segregation
CEQ36_20565	COG3188	usher protein
CEQ36_20570	COG3121	Chaperone
CEQ36_20585	COG3539	Fimbrial protein
CEQ36_20590	COG3539	Fimbrial protein
CEQ36_20605	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CEQ36_20620	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ36_20625	COG0577	efflux transmembrane transporter activity
CEQ36_20625	COG1136	(ABC) transporter
CEQ36_20630	COG1538	Outer membrane efflux protein
CEQ36_20650	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ36_20655	COG4948	Mandelate Racemase Muconate Lactonizing
CEQ36_20660	COG0747	negative chemotaxis
CEQ36_20665	COG0601	transmembrane transport
CEQ36_20675	COG0444	Belongs to the ABC transporter superfamily
CEQ36_20680	COG4608	Belongs to the ABC transporter superfamily
CEQ36_20685	COG0583	DNA-binding transcription factor activity
CEQ36_20690	COG2610	gluconate transmembrane transporter activity
CEQ36_20695	COG3048	D-serine ammonia-lyase activity
CEQ36_20700	COG3158	transport of potassium into the cell
CEQ36_20705	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CEQ36_20710	COG0640	Transcriptional regulator
CEQ36_20765	COG0410	ABC transporter
CEQ36_20770	COG1137	ATPase activity
CEQ36_20775	COG4177	L-phenylalanine transmembrane transporter activity
CEQ36_20780	COG0559	Belongs to the binding-protein-dependent transport system permease family
CEQ36_20790	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CEQ36_20790	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CEQ36_20795	COG1070	Carbohydrate kinase
CEQ36_20800	COG3623	hexulose-6-phosphate isomerase
CEQ36_20805	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEQ36_20810	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEQ36_20825	COG1349	DNA-binding transcription factor activity
CEQ36_20830	COG0235	Class ii aldolase
CEQ36_20835	COG1349	DNA-binding transcription factor activity
CEQ36_20845	COG1070	Carbohydrate kinase
CEQ36_20855	COG0738	Major facilitator superfamily
CEQ36_20860	COG0235	Class ii aldolase
CEQ36_20865	COG1454	alcohol dehydrogenase
CEQ36_20870	COG0243	molybdopterin cofactor binding
CEQ36_20875	COG0437	4 iron, 4 sulfur cluster binding
CEQ36_20880	COG3302	dmso reductase anchor subunit
CEQ36_20885	COG3381	protein complex oligomerization
CEQ36_20900	COG1609	Transcriptional regulator
CEQ36_20910	COG1129	ABC transporter
CEQ36_20915	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEQ36_20920	COG3959	Transketolase, thiamine diphosphate binding domain
CEQ36_20925	COG3958	Transketolase
CEQ36_20930	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CEQ36_20955	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CEQ36_20960	COG2137	regulation of response to DNA damage stimulus
CEQ36_20965	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CEQ36_20970	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
CEQ36_20995	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CEQ36_21000	COG1238	metal cluster binding
CEQ36_21005	COG2918	glutathione biosynthetic process
CEQ36_21010	COG1854	S-ribosylhomocysteine lyase activity
CEQ36_21015	COG4536	flavin adenine dinucleotide binding
CEQ36_21020	COG4137	Cytochrome C assembly protein
CEQ36_21025	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CEQ36_21030	COG0228	four-way junction DNA binding
CEQ36_21040	COG0336	Belongs to the RNA methyltransferase TrmD family
CEQ36_21045	COG0335	large ribosomal subunit rRNA binding
CEQ36_21050	COG3137	Salt-induced outer membrane protein
CEQ36_21055	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CEQ36_21060	COG3279	Response regulator of the LytR AlgR family
CEQ36_21065	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CEQ36_21070	COG0287	Prephenate dehydrogenase
CEQ36_21070	COG1605	Chorismate mutase
CEQ36_21075	COG0077	Prephenate dehydratase
CEQ36_21075	COG1605	Chorismate mutase
CEQ36_21085	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CEQ36_21090	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CEQ36_21100	COG0564	pseudouridine synthase activity
CEQ36_21110	COG0542	response to heat
CEQ36_21170	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CEQ36_21185	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CEQ36_21225	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ36_21240	COG0583	DNA-binding transcription factor activity
CEQ36_21245	COG2814	Major facilitator Superfamily
CEQ36_21250	COG3021	interspecies interaction between organisms
CEQ36_21255	COG1388	LysM domain
CEQ36_21255	COG0741	lytic transglycosylase activity
CEQ36_21260	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CEQ36_21265	COG2226	methyltransferase
CEQ36_21275	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CEQ36_21305	COG2113	Glycine betaine
CEQ36_21310	COG4176	ABC-type proline glycine betaine transport system permease component
CEQ36_21320	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CEQ36_21330	COG1780	Probably involved in ribonucleotide reductase function
CEQ36_21335	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CEQ36_21345	COG4575	ribosome binding
CEQ36_21360	COG2207	Transcriptional regulator
CEQ36_21360	COG3708	Transcriptional regulator
CEQ36_21380	COG1278	Cold shock
CEQ36_21410	COG0601	transmembrane transport
CEQ36_21415	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CEQ36_21425	COG1124	(ABC) transporter
CEQ36_21445	COG0804	urea catabolic process
CEQ36_21450	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
CEQ36_21455	COG0830	nickel cation binding
CEQ36_21460	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CEQ36_21470	COG4413	Urea transporter
CEQ36_21475	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
CEQ36_21485	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CEQ36_21490	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CEQ36_21500	COG0667	Aldo Keto reductase
CEQ36_21505	COG2133	pyrroloquinoline quinone binding
CEQ36_21510	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CEQ36_21515	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CEQ36_21520	COG2723	6-phospho-beta-galactosidase activity
CEQ36_21525	COG1447	Phosphotransferase system cellobiose-specific component IIA
CEQ36_21530	COG2169	Transcriptional regulator
CEQ36_21530	COG1917	Cupin 2, conserved barrel domain protein
CEQ36_21535	COG3394	polysaccharide catabolic process
CEQ36_21575	COG3778	Protein conserved in bacteria
CEQ36_21595	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CEQ36_21605	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CEQ36_21610	COG2867	negative regulation of translational initiation
CEQ36_21620	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CEQ36_21625	COG0497	DNA recombination
CEQ36_21630	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CEQ36_21640	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CEQ36_21645	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CEQ36_21650	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
CEQ36_21665	COG0513	Belongs to the DEAD box helicase family
CEQ36_21670	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CEQ36_21675	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CEQ36_21685	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
CEQ36_21690	COG3026	antisigma factor binding
CEQ36_21695	COG3086	response to oxidative stress
CEQ36_21705	COG0481	GTPase activity
CEQ36_21710	COG0681	Belongs to the peptidase S26 family
CEQ36_21720	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CEQ36_21725	COG1381	Involved in DNA repair and RecF pathway recombination
CEQ36_21730	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CEQ36_21735	COG0736	holo-[acyl-carrier-protein] synthase activity
CEQ36_21740	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CEQ36_21745	COG1737	Transcriptional regulator
CEQ36_21760	COG0560	Phosphoserine phosphatase
CEQ36_21770	COG0590	tRNA wobble adenosine to inosine editing
CEQ36_21775	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
CEQ36_21790	COG2205	protein histidine kinase activity
CEQ36_21795	COG3170	Tfp pilus assembly protein FimV
CEQ36_21800	COG2204	response regulator
CEQ36_21805	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CEQ36_21805	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CEQ36_21810	COG0347	Belongs to the P(II) protein family
CEQ36_21825	COG1735	metal-dependent hydrolase with the TIM-barrel fold
CEQ36_21830	COG3457	Alanine racemase
CEQ36_21840	COG2188	Transcriptional regulator
CEQ36_21845	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CEQ36_21845	COG1017	nitric oxide dioxygenase activity
CEQ36_21855	COG2814	Major facilitator Superfamily
CEQ36_21860	COG3711	transcriptional antiterminator
CEQ36_21865	COG3683	transport system, periplasmic component
CEQ36_21870	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
CEQ36_21875	COG0483	inositol monophosphate 1-phosphatase activity
CEQ36_21880	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
CEQ36_21885	COG1959	2 iron, 2 sulfur cluster binding
CEQ36_21895	COG0822	iron-sulfur transferase activity
CEQ36_21905	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CEQ36_21910	COG0443	Heat shock 70 kDa protein
CEQ36_21915	COG0633	Ferredoxin
CEQ36_21920	COG2975	iron-sulfur cluster assembly
CEQ36_21935	COG3468	outer membrane autotransporter barrel domain protein
CEQ36_21945	COG2373	Large extracellular alpha-helical protein
CEQ36_21950	COG4953	penicillin-binding protein 1C
CEQ36_21970	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CEQ36_21980	COG1426	Protein conserved in bacteria
CEQ36_21995	COG2976	Protein conserved in bacteria
CEQ36_22000	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CEQ36_22015	COG1645	bacterial-type flagellum-dependent swarming motility
CEQ36_22025	COG0517	IMP dehydrogenase activity
CEQ36_22025	COG0516	GMP reductase activity
CEQ36_22030	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CEQ36_22030	COG0519	Catalyzes the synthesis of GMP from XMP
CEQ36_22050	COG0351	phosphomethylpyrimidine kinase
CEQ36_22070	COG1349	DNA-binding transcription factor activity
CEQ36_22075	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
CEQ36_22080	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ36_22095	COG3730	PTS system glucitol sorbitol-specific
CEQ36_22100	COG1597	lipid kinase activity
CEQ36_22110	COG3422	double-strand break repair
CEQ36_22115	COG0745	RESPONSE REGULATOR receiver
CEQ36_22120	COG2205	protein histidine kinase activity
CEQ36_22125	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEQ36_22135	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ36_22140	COG0443	Heat shock 70 kDa protein
CEQ36_22145	COG3447	MASE1 domain protein
CEQ36_22145	COG5002	protein histidine kinase activity
CEQ36_22145	COG5001	Diguanylate cyclase
CEQ36_22150	COG2239	Acts as a magnesium transporter
CEQ36_22160	COG0248	Ppx GppA phosphatase
CEQ36_22165	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CEQ36_22170	COG0573	inorganic phosphate transmembrane transporter activity
CEQ36_22175	COG0581	inorganic phosphate transmembrane transporter activity
CEQ36_22190	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CEQ36_22195	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CEQ36_22200	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CEQ36_22210	COG2233	PERMEase
CEQ36_22215	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CEQ36_22220	COG1393	Belongs to the ArsC family
CEQ36_22225	COG4783	chaperone-mediated protein folding
CEQ36_22230	COG0628	permease
CEQ36_22240	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CEQ36_22245	COG2716	regulation of RNA biosynthetic process
CEQ36_22250	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CEQ36_22255	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CEQ36_22270	COG2321	neutral zinc metallopeptidase
CEQ36_22280	COG1444	tRNA N-acetyltransferase activity
CEQ36_22290	COG0400	carboxylic ester hydrolase activity
CEQ36_22300	COG1876	peptidase activity
CEQ36_22305	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CEQ36_22310	COG1393	Belongs to the ArsC family
CEQ36_22320	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEQ36_22330	COG2197	response regulator
CEQ36_22335	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
CEQ36_22335	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CEQ36_22340	COG3062	negative regulation of establishment of protein localization
CEQ36_22345	COG0243	molybdopterin cofactor binding
CEQ36_22350	COG3043	anaerobic respiration
CEQ36_22355	COG3005	denitrification pathway
CEQ36_22370	COG0494	nUDIX hydrolase
CEQ36_22380	COG1671	Belongs to the UPF0178 family
CEQ36_22385	COG0408	coproporphyrinogen oxidase activity
CEQ36_22390	COG0456	acetyltransferase
CEQ36_22425	COG1309	transcriptional regulator
CEQ36_22435	COG2814	Major facilitator Superfamily
CEQ36_22500	COG3111	PFAM Bacterial OB fold (BOF) protein
CEQ36_22515	COG2837	iron assimilation
CEQ36_22520	COG4150	thiosulfate binding
CEQ36_22525	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CEQ36_22530	COG4208	sulfate ABC transporter
CEQ36_22575	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CEQ36_22605	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ36_22610	COG0745	RESPONSE REGULATOR receiver
CEQ36_22615	COG2205	protein histidine kinase activity
CEQ36_22620	COG2190	(PTS) system
CEQ36_22630	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CEQ36_22635	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CEQ36_22640	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
CEQ36_22650	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CEQ36_22655	COG3530	Putative quorum-sensing-regulated virulence factor
CEQ36_22685	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CEQ36_22730	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CEQ36_22735	COG1914	H( )-stimulated, divalent metal cation uptake system
CEQ36_22745	COG0667	Aldo Keto reductase
CEQ36_22760	COG0837	glucose binding
CEQ36_22765	COG2223	nitrite transmembrane transporter activity
CEQ36_22770	COG3279	Response regulator of the LytR AlgR family
CEQ36_22775	COG3275	phosphorelay sensor kinase activity
CEQ36_22790	COG0436	Aminotransferase
CEQ36_22795	COG3038	cytochrome b561
CEQ36_22805	COG1598	PFAM Uncharacterised protein family UPF0150
CEQ36_22815	COG3381	protein complex oligomerization
CEQ36_22820	COG3302	dmso reductase anchor subunit
CEQ36_22825	COG0437	4 iron, 4 sulfur cluster binding
CEQ36_22830	COG0243	molybdopterin cofactor binding
CEQ36_22845	COG2723	6-phospho-beta-galactosidase activity
CEQ36_22875	COG2951	lytic endotransglycosylase activity
CEQ36_22880	COG0531	amino acid
CEQ36_22900	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CEQ36_22905	COG1127	ABC transporter
CEQ36_22925	COG0626	cystathionine gamma-synthase activity
CEQ36_22935	COG3038	cytochrome b561
CEQ36_22940	COG2353	YceI-like domain
CEQ36_22950	COG1609	Transcriptional regulator
CEQ36_22955	COG1263	PTS System
CEQ36_22955	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CEQ36_22960	COG2723	6-phospho-beta-galactosidase activity
CEQ36_22970	COG1695	Transcriptional regulator
CEQ36_23035	COG0582	viral genome integration into host DNA
CEQ36_23045	COG2824	Alkylphosphonate utilization operon protein PhnA
CEQ36_23060	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CEQ36_23065	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CEQ36_23070	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CEQ36_23075	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
CEQ36_23080	COG1138	Cytochrome C-type biogenesis protein
CEQ36_23085	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CEQ36_23090	COG3088	subunit of a heme lyase
CEQ36_23090	COG4235	cytochrome complex assembly
CEQ36_23095	COG4235	cytochrome complex assembly
CEQ36_23095	COG3088	subunit of a heme lyase
CEQ36_23110	COG3691	Protein conserved in bacteria
CEQ36_23115	COG0183	Belongs to the thiolase family
CEQ36_23120	COG1024	Enoyl-CoA hydratase
CEQ36_23120	COG1250	3-hydroxyacyl-CoA dehydrogenase
CEQ36_23125	COG2062	phosphohistidine phosphatase, SixA
CEQ36_23130	COG2840	Smr protein MutS2
CEQ36_23135	COG2890	protein-(glutamine-N5) methyltransferase activity
CEQ36_23140	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CEQ36_23145	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
CEQ36_23150	COG0730	response to heat
CEQ36_23155	COG3101	peptidyl-lysine hydroxylation
CEQ36_23165	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
CEQ36_23165	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEQ36_23170	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CEQ36_23175	COG0745	RESPONSE REGULATOR receiver
CEQ36_23175	COG3706	GGDEF domain
CEQ36_23180	COG1794	racemase activity, acting on amino acids and derivatives
CEQ36_23190	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump