locus-tag class description MNQ97_00005 PF01134 Glucose inhibited division protein A MNQ97_00005 PF13932 GidA associated domain MNQ97_00010 PF02527 rRNA small subunit methyltransferase G MNQ97_00015 PF03899 ATP synthase I chain MNQ97_00020 PF00119 ATP synthase A chain MNQ97_00025 PF00137 ATP synthase subunit C MNQ97_00030 PF00430 ATP synthase B/B' CF(0) MNQ97_00035 PF00213 ATP synthase delta (OSCP) subunit MNQ97_00040 PF00306 ATP synthase alpha/beta chain, C terminal domain MNQ97_00040 PF02874 ATP synthase alpha/beta family, beta-barrel domain MNQ97_00040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MNQ97_00045 PF00231 ATP synthase MNQ97_00050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MNQ97_00050 PF02874 ATP synthase alpha/beta family, beta-barrel domain MNQ97_00055 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain MNQ97_00055 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MNQ97_00060 PF00132 Bacterial transferase hexapeptide (six repeats) MNQ97_00060 PF12804 MobA-like NTP transferase domain MNQ97_00065 PF01380 SIS domain MNQ97_00110 PF12849 PBP superfamily domain MNQ97_00115 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_00120 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_00125 PF00005 ABC transporter MNQ97_00130 PF01895 PhoU domain MNQ97_00140 PF00497 Bacterial extracellular solute-binding proteins, family 3 MNQ97_00145 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_00150 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_00155 PF13419 Haloacid dehalogenase-like hydrolase MNQ97_00160 PF00860 Permease family MNQ97_00170 PF00196 Bacterial regulatory proteins, luxR family MNQ97_00170 PF00072 Response regulator receiver domain MNQ97_00175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_00175 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_00175 PF00989 PAS fold MNQ97_00180 PF03358 NADPH-dependent FMN reductase MNQ97_00185 PF02203 Tar ligand binding domain homologue MNQ97_00185 PF00672 HAMP domain MNQ97_00185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MNQ97_00190 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_00195 PF09383 NIL domain MNQ97_00195 PF00005 ABC transporter MNQ97_00200 PF03180 NLPA lipoprotein MNQ97_00205 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MNQ97_00205 PF12241 Trans-2-enoyl-CoA reductase catalytic region MNQ97_00205 PF07055 Enoyl reductase FAD binding domain MNQ97_00210 PF01926 50S ribosome-binding GTPase MNQ97_00210 PF12631 MnmE helical domain MNQ97_00210 PF10396 GTP-binding protein TrmE N-terminus MNQ97_00215 PF02096 60Kd inner membrane protein MNQ97_00215 PF14849 YidC periplasmic domain MNQ97_00220 PF01809 Putative membrane protein insertion efficiency factor MNQ97_00225 PF00825 Ribonuclease P MNQ97_00230 PF00468 Ribosomal protein L34 MNQ97_00235 PF00308 Bacterial dnaA protein MNQ97_00235 PF08299 Bacterial dnaA protein helix-turn-helix MNQ97_00235 PF11638 DnaA N-terminal domain MNQ97_00240 PF02768 DNA polymerase III beta subunit, C-terminal domain MNQ97_00240 PF02767 DNA polymerase III beta subunit, central domain MNQ97_00240 PF00712 DNA polymerase III beta subunit, N-terminal domain MNQ97_00245 PF02463 RecF/RecN/SMC N terminal domain MNQ97_00250 PF00204 DNA gyrase B MNQ97_00250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_00250 PF01751 Toprim domain MNQ97_00250 PF18053 DNA gyrase B subunit insert domain MNQ97_00250 PF00986 DNA gyrase B subunit, carboxyl terminus MNQ97_00260 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit MNQ97_00265 PF02264 LamB porin MNQ97_00265 PF11471 Maltoporin periplasmic N-terminal extension MNQ97_00270 PF00480 ROK family MNQ97_00275 PF02378 Phosphotransferase system, EIIC MNQ97_00280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MNQ97_00285 PF00232 Glycosyl hydrolase family 1 MNQ97_00290 PF00392 Bacterial regulatory proteins, gntR family MNQ97_00290 PF07702 UTRA domain MNQ97_00295 PF02423 Ornithine cyclodeaminase/mu-crystallin family MNQ97_00300 PF13291 ACT domain MNQ97_00300 PF00291 Pyridoxal-phosphate dependent enzyme MNQ97_00305 PF13309 HTH domain MNQ97_00305 PF08348 YheO-like PAS domain MNQ97_00310 PF07729 FCD domain MNQ97_00310 PF00392 Bacterial regulatory proteins, gntR family MNQ97_00315 PF05035 2-keto-3-deoxy-galactonokinase MNQ97_00320 PF01081 KDPG and KHG aldolase MNQ97_00325 PF13378 Enolase C-terminal domain-like MNQ97_00325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MNQ97_00330 PF07690 Major Facilitator Superfamily MNQ97_00335 PF12566 Protein of unknown function (DUF3748) MNQ97_00335 PF07676 WD40-like Beta Propeller Repeat MNQ97_00340 PF07119 Protein of unknown function (DUF1375) MNQ97_00345 PF00011 Hsp20/alpha crystallin family MNQ97_00350 PF00011 Hsp20/alpha crystallin family MNQ97_00355 PF02080 TrkA-C domain MNQ97_00355 PF06826 Predicted Permease Membrane Region MNQ97_00360 PF00155 Aminotransferase class I and II MNQ97_00365 PF00128 Alpha amylase, catalytic domain MNQ97_00375 PF05016 ParE toxin of type II toxin-antitoxin system, parDE MNQ97_00380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MNQ97_00380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MNQ97_00385 PF07690 Major Facilitator Superfamily MNQ97_00395 PF00691 OmpA family MNQ97_00395 PF13488 Glycine zipper MNQ97_00410 PF00583 Acetyltransferase (GNAT) family MNQ97_00415 PF03352 Methyladenine glycosylase MNQ97_00420 PF02091 Glycyl-tRNA synthetase alpha subunit MNQ97_00425 PF05746 DALR anticodon binding domain MNQ97_00425 PF02092 Glycyl-tRNA synthetase beta subunit MNQ97_00430 PF11254 Protein of unknown function (DUF3053) MNQ97_00435 PF02378 Phosphotransferase system, EIIC MNQ97_00435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MNQ97_00435 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MNQ97_00440 PF08125 Mannitol dehydrogenase C-terminal domain MNQ97_00440 PF01232 Mannitol dehydrogenase Rossmann domain MNQ97_00445 PF05068 Mannitol repressor MNQ97_00455 PF00155 Aminotransferase class I and II MNQ97_00455 PF00392 Bacterial regulatory proteins, gntR family MNQ97_00460 PF10928 Protein of unknown function (DUF2810) MNQ97_00465 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin MNQ97_00470 PF01850 PIN domain MNQ97_00475 PF03473 MOSC domain MNQ97_00475 PF03475 3-alpha domain MNQ97_00480 PF02203 Tar ligand binding domain homologue MNQ97_00480 PF00672 HAMP domain MNQ97_00480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MNQ97_00485 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MNQ97_00485 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MNQ97_00490 PF02634 FdhD/NarQ family MNQ97_00500 PF09163 Formate dehydrogenase N, transmembrane MNQ97_00500 PF13247 4Fe-4S dicluster domain MNQ97_00505 PF01292 Prokaryotic cytochrome b561 MNQ97_00510 PF04216 Protein involved in formate dehydrogenase formation MNQ97_00515 PF03841 L-seryl-tRNA selenium transferase MNQ97_00515 PF12390 Selenocysteine synthase N terminal MNQ97_00520 PF09107 Elongation factor SelB, winged helix MNQ97_00520 PF09106 Elongation factor SelB, winged helix MNQ97_00520 PF03144 Elongation factor Tu domain 2 MNQ97_00520 PF00009 Elongation factor Tu GTP binding domain MNQ97_00530 PF07804 HipA-like C-terminal domain MNQ97_00530 PF13657 HipA N-terminal domain MNQ97_00535 PF07690 Major Facilitator Superfamily MNQ97_00540 PF01757 Acyltransferase family MNQ97_00550 PF00857 Isochorismatase family MNQ97_00555 PF00419 Fimbrial protein MNQ97_00560 PF13953 PapC C-terminal domain MNQ97_00560 PF13954 PapC N-terminal domain MNQ97_00560 PF00577 Outer membrane usher protein MNQ97_00565 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_00565 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_00575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MNQ97_00575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MNQ97_00585 PF13407 Periplasmic binding protein domain MNQ97_00590 PF00005 ABC transporter MNQ97_00595 PF02653 Branched-chain amino acid transport system / permease component MNQ97_00600 PF12833 Helix-turn-helix domain MNQ97_00610 PF14659 Phage integrase, N-terminal SAM-like domain MNQ97_00610 PF00589 Phage integrase family MNQ97_00610 PF13356 Arm DNA-binding domain MNQ97_00625 PF04606 Ogr/Delta-like zinc finger MNQ97_00655 PF17345 Family of unknown function (DUF5375) MNQ97_00665 PF03796 DnaB-like helicase C terminal domain MNQ97_00665 PF00772 DnaB-like helicase N terminal domain MNQ97_00675 PF17391 Urocanase N-terminal domain MNQ97_00675 PF17392 Urocanase C-terminal domain MNQ97_00675 PF01175 Urocanase Rossmann-like domain MNQ97_00680 PF00221 Aromatic amino acid lyase MNQ97_00685 PF00324 Amino acid permease MNQ97_00695 PF12146 Serine aminopeptidase, S33 MNQ97_00700 PF02566 OsmC-like protein MNQ97_00705 PF08019 Phosphoethanolamine transferase EptA/EptB MNQ97_00705 PF00884 Sulfatase MNQ97_00710 PF00196 Bacterial regulatory proteins, luxR family MNQ97_00710 PF00072 Response regulator receiver domain MNQ97_00715 PF05231 MASE1 MNQ97_00715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_00715 PF07730 Histidine kinase MNQ97_00720 PF07690 Major Facilitator Superfamily MNQ97_00730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MNQ97_00735 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_00740 PF12911 N-terminal TM domain of oligopeptide transport permease C MNQ97_00740 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_00745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MNQ97_00745 PF00005 ABC transporter MNQ97_00750 PF00005 ABC transporter MNQ97_00750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MNQ97_00755 PF11658 Cellulose biosynthesis protein BcsG MNQ97_00760 PF11120 Cellulose biosynthesis protein BcsF MNQ97_00765 PF10995 Cellulose biosynthesis GIL MNQ97_00775 PF06564 Cellulose biosynthesis protein BcsQ MNQ97_00780 PF00535 Glycosyl transferase family 2 MNQ97_00780 PF07238 PilZ domain MNQ97_00785 PF03170 Bacterial cellulose synthase subunit MNQ97_00790 PF01270 Glycosyl hydrolases family 8 MNQ97_00795 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) MNQ97_00800 PF00672 HAMP domain MNQ97_00800 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_00800 PF17154 Gammaproteobacterial periplasmic sensor domain MNQ97_00800 PF00563 EAL domain MNQ97_00810 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_00810 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_00815 PF13954 PapC N-terminal domain MNQ97_00815 PF00577 Outer membrane usher protein MNQ97_00815 PF13953 PapC C-terminal domain MNQ97_00825 PF06178 Oligogalacturonate-specific porin protein (KdgM) MNQ97_00830 PF06917 Periplasmic pectate lyase MNQ97_00840 PF00375 Sodium:dicarboxylate symporter family MNQ97_00845 PF00675 Insulinase (Peptidase family M16) MNQ97_00845 PF05193 Peptidase M16 inactive domain MNQ97_00850 PF00294 pfkB family carbohydrate kinase MNQ97_00855 PF01361 Tautomerase enzyme MNQ97_00860 PF00563 EAL domain MNQ97_00865 PF05170 AsmA family MNQ97_00870 PF02611 CDP-diacylglycerol pyrophosphatase MNQ97_00875 PF03631 Virulence factor BrkB MNQ97_00880 PF01381 Helix-turn-helix MNQ97_00880 PF08671 Anti-repressor SinI MNQ97_00890 PF07992 Pyridine nucleotide-disulphide oxidoreductase MNQ97_00890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MNQ97_00895 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ MNQ97_00900 PF01432 Peptidase family M3 MNQ97_00905 PF04445 Putative SAM-dependent methyltransferase MNQ97_00910 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) MNQ97_00910 PF08548 Peptidase M10 serralysin C terminal MNQ97_00915 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) MNQ97_00915 PF00413 Matrixin MNQ97_00915 PF08548 Peptidase M10 serralysin C terminal MNQ97_00920 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MNQ97_00920 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MNQ97_00925 PF00582 Universal stress protein family MNQ97_00930 PF10625 Universal stress protein B (UspB) MNQ97_00935 PF01384 Phosphate transporter family MNQ97_00945 PF00144 Beta-lactamase MNQ97_00950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_00950 PF03466 LysR substrate binding domain MNQ97_00965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_00965 PF03466 LysR substrate binding domain MNQ97_00970 PF07690 Major Facilitator Superfamily MNQ97_00980 PF00171 Aldehyde dehydrogenase family MNQ97_00985 PF04962 KduI/IolB family MNQ97_00995 PF00294 pfkB family carbohydrate kinase MNQ97_01000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MNQ97_01000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MNQ97_01000 PF00205 Thiamine pyrophosphate enzyme, central domain MNQ97_01005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MNQ97_01005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MNQ97_01010 PF01261 Xylose isomerase-like TIM barrel MNQ97_01015 PF00583 Acetyltransferase (GNAT) family MNQ97_01020 PF02678 Pirin MNQ97_01020 PF17954 Quercetinase C-terminal cupin domain MNQ97_01025 PF00356 Bacterial regulatory proteins, lacI family MNQ97_01025 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MNQ97_01030 PF02447 GntP family permease MNQ97_01035 PF01202 Shikimate kinase MNQ97_01040 PF01914 MarC family integral membrane protein MNQ97_01045 PF02774 Semialdehyde dehydrogenase, dimerisation domain MNQ97_01045 PF01118 Semialdehyde dehydrogenase, NAD binding domain MNQ97_01050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MNQ97_01050 PF00205 Thiamine pyrophosphate enzyme, central domain MNQ97_01050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MNQ97_01055 PF03306 Alpha-acetolactate decarboxylase MNQ97_01060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_01060 PF03466 LysR substrate binding domain MNQ97_01065 PF07694 5TMR of 5TMR-LYT MNQ97_01065 PF06580 Histidine kinase MNQ97_01070 PF02806 Alpha amylase, C-terminal all-beta domain MNQ97_01070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MNQ97_01070 PF00128 Alpha amylase, catalytic domain MNQ97_01075 PF18390 Glycogen debranching enzyme C-terminal domain MNQ97_01075 PF00128 Alpha amylase, catalytic domain MNQ97_01075 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MNQ97_01080 PF00483 Nucleotidyl transferase MNQ97_01085 PF00534 Glycosyl transferases group 1 MNQ97_01085 PF08323 Starch synthase catalytic domain MNQ97_01090 PF00343 Carbohydrate phosphorylase MNQ97_01095 PF01266 FAD dependent oxidoreductase MNQ97_01095 PF16901 C-terminal domain of alpha-glycerophosphate oxidase MNQ97_01100 PF00455 DeoR C terminal sensor domain MNQ97_01100 PF08220 DeoR-like helix-turn-helix domain MNQ97_01105 PF01694 Rhomboid family MNQ97_01105 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease MNQ97_01110 PF00581 Rhodanese-like domain MNQ97_01115 PF17874 MalT-like TPR region MNQ97_01115 PF00196 Bacterial regulatory proteins, luxR family MNQ97_01120 PF00343 Carbohydrate phosphorylase MNQ97_01125 PF02446 4-alpha-glucanotransferase MNQ97_01130 PF01521 Iron-sulphur cluster biosynthesis MNQ97_01130 PF01106 NifU-like domain MNQ97_01135 PF00156 Phosphoribosyl transferase domain MNQ97_01140 PF00561 alpha/beta hydrolase fold MNQ97_01145 PF07338 Protein of unknown function (DUF1471) MNQ97_01150 PF09012 FeoC like transcriptional regulator MNQ97_01155 PF07664 Ferrous iron transport protein B C terminus MNQ97_01155 PF07670 Nucleoside recognition MNQ97_01155 PF02421 Ferrous iron transport protein B MNQ97_01155 PF17910 FeoB cytosolic helical domain MNQ97_01160 PF04023 FeoA domain MNQ97_01165 PF17674 HHH domain MNQ97_01165 PF16921 Tex protein YqgF-like domain MNQ97_01165 PF09371 Tex-like protein N-terminal domain MNQ97_01165 PF00575 S1 RNA binding domain MNQ97_01170 PF03449 Transcription elongation factor, N-terminal MNQ97_01170 PF01272 Transcription elongation factor, GreA/GreB, C-term MNQ97_01175 PF00072 Response regulator receiver domain MNQ97_01175 PF00486 Transcriptional regulatory protein, C terminal MNQ97_01180 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_01180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_01180 PF00672 HAMP domain MNQ97_01185 PF01293 Phosphoenolpyruvate carboxykinase MNQ97_01190 PF01430 Hsp33 protein MNQ97_01195 PF01479 S4 domain MNQ97_01200 PF13419 Haloacid dehalogenase-like hydrolase MNQ97_01205 PF07095 Intracellular growth attenuator protein IgaA MNQ97_01210 PF00293 NUDIX domain MNQ97_01215 PF00912 Transglycosylase MNQ97_01215 PF17092 Penicillin-binding protein OB-like domain MNQ97_01215 PF00905 Penicillin binding protein transpeptidase domain MNQ97_01240 PF00263 Bacterial type II and III secretion system protein MNQ97_01240 PF03958 Bacterial type II/III secretion system short domain MNQ97_01245 PF01202 Shikimate kinase MNQ97_01250 PF01761 3-dehydroquinate synthase MNQ97_01255 PF05036 Sporulation related domain MNQ97_01260 PF02086 D12 class N6 adenine-specific DNA methyltransferase MNQ97_01265 PF00834 Ribulose-phosphate 3 epimerase family MNQ97_01270 PF13419 Haloacid dehalogenase-like hydrolase MNQ97_01275 PF00579 tRNA synthetases class I (W and Y) MNQ97_01280 PF10414 Sirohaem synthase dimerisation region MNQ97_01280 PF14824 Sirohaem biosynthesis protein central MNQ97_01280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MNQ97_01285 PF01226 Formate/nitrite transporter MNQ97_01290 PF13806 Rieske-like [2Fe-2S] domain MNQ97_01295 PF04324 BFD-like [2Fe-2S] binding domain MNQ97_01295 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MNQ97_01295 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MNQ97_01295 PF07992 Pyridine nucleotide-disulphide oxidoreductase MNQ97_01295 PF18267 Rubredoxin NAD+ reductase C-terminal domain MNQ97_01300 PF07969 Amidohydrolase family MNQ97_01305 PF07690 Major Facilitator Superfamily MNQ97_01315 PF00593 TonB dependent receptor MNQ97_01315 PF07715 TonB-dependent Receptor Plug Domain MNQ97_01320 PF00356 Bacterial regulatory proteins, lacI family MNQ97_01325 PF11975 Family 4 glycosyl hydrolase C-terminal domain MNQ97_01325 PF02056 Family 4 glycosyl hydrolase MNQ97_01330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MNQ97_01335 PF05872 Bacterial protein of unknown function (DUF853) MNQ97_01340 PF00117 Glutamine amidotransferase class-I MNQ97_01345 PF00202 Aminotransferase class-III MNQ97_01350 PF12805 FUSC-like inner membrane protein yccS MNQ97_01355 PF00027 Cyclic nucleotide-binding domain MNQ97_01355 PF13545 Crp-like helix-turn-helix domain MNQ97_01360 PF02566 OsmC-like protein MNQ97_01365 PF00485 Phosphoribulokinase / Uridine kinase family MNQ97_01370 PF06794 Uncharacterised protein family (UPF0270) MNQ97_01375 PF00561 alpha/beta hydrolase fold MNQ97_01380 PF01810 LysE type translocator MNQ97_01385 PF02567 Phenazine biosynthesis-like protein MNQ97_01390 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MNQ97_01395 PF00005 ABC transporter MNQ97_01400 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_01405 PF02668 Taurine catabolism dioxygenase TauD, TfdA family MNQ97_01415 PF00535 Glycosyl transferase family 2 MNQ97_01420 PF12848 ABC transporter MNQ97_01420 PF00005 ABC transporter MNQ97_01425 PF02525 Flavodoxin-like fold MNQ97_01430 PF00999 Sodium/hydrogen exchanger family MNQ97_01430 PF02254 TrkA-N domain MNQ97_01435 PF09526 Probable metal-binding protein (DUF2387) MNQ97_01440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MNQ97_01445 PF04102 SlyX MNQ97_01450 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MNQ97_01450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MNQ97_01455 PF08348 YheO-like PAS domain MNQ97_01455 PF13309 HTH domain MNQ97_01460 PF02635 DsrE/DsrF-like family MNQ97_01465 PF02635 DsrE/DsrF-like family MNQ97_01470 PF04077 DsrH like protein MNQ97_01475 PF00164 Ribosomal protein S12/S23 MNQ97_01480 PF00177 Ribosomal protein S7p/S5e MNQ97_01485 PF00009 Elongation factor Tu GTP binding domain MNQ97_01485 PF00679 Elongation factor G C-terminus MNQ97_01485 PF14492 Elongation Factor G, domain II MNQ97_01485 PF03764 Elongation factor G, domain IV MNQ97_01485 PF03144 Elongation factor Tu domain 2 MNQ97_01490 PF03143 Elongation factor Tu C-terminal domain MNQ97_01490 PF00009 Elongation factor Tu GTP binding domain MNQ97_01490 PF03144 Elongation factor Tu domain 2 MNQ97_01495 PF04324 BFD-like [2Fe-2S] binding domain MNQ97_01500 PF00210 Ferritin-like domain MNQ97_01505 PF00338 Ribosomal protein S10p/S20e MNQ97_01510 PF00297 Ribosomal protein L3 MNQ97_01515 PF00573 Ribosomal protein L4/L1 family MNQ97_01520 PF00276 Ribosomal protein L23 MNQ97_01525 PF03947 Ribosomal Proteins L2, C-terminal domain MNQ97_01525 PF00181 Ribosomal Proteins L2, RNA binding domain MNQ97_01530 PF00203 Ribosomal protein S19 MNQ97_01535 PF00237 Ribosomal protein L22p/L17e MNQ97_01540 PF07650 KH domain MNQ97_01540 PF00189 Ribosomal protein S3, C-terminal domain MNQ97_01545 PF00252 Ribosomal protein L16p/L10e MNQ97_01550 PF00831 Ribosomal L29 protein MNQ97_01555 PF00366 Ribosomal protein S17 MNQ97_01560 PF00238 Ribosomal protein L14p/L23e MNQ97_01565 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MNQ97_01565 PF00467 KOW motif MNQ97_01570 PF00673 ribosomal L5P family C-terminus MNQ97_01570 PF00281 Ribosomal protein L5 MNQ97_01575 PF00253 Ribosomal protein S14p/S29e MNQ97_01580 PF00410 Ribosomal protein S8 MNQ97_01585 PF00347 Ribosomal protein L6 MNQ97_01590 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MNQ97_01595 PF03719 Ribosomal protein S5, C-terminal domain MNQ97_01595 PF00333 Ribosomal protein S5, N-terminal domain MNQ97_01600 PF00327 Ribosomal protein L30p/L7e MNQ97_01605 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MNQ97_01610 PF00344 SecY translocase MNQ97_01615 PF00444 Ribosomal protein L36 MNQ97_01620 PF00416 Ribosomal protein S13/S18 MNQ97_01625 PF00411 Ribosomal protein S11 MNQ97_01630 PF00163 Ribosomal protein S4/S9 N-terminal domain MNQ97_01630 PF01479 S4 domain MNQ97_01635 PF01000 RNA polymerase Rpb3/RpoA insert domain MNQ97_01635 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MNQ97_01635 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MNQ97_01640 PF01196 Ribosomal protein L17 MNQ97_01645 PF09350 Domain of unknown function (DUF1992) MNQ97_01650 PF13411 MerR HTH family regulatory protein MNQ97_01655 PF03889 Alternative ribosome-rescue factor A MNQ97_01660 PF01741 Large-conductance mechanosensitive channel, MscL MNQ97_01665 PF02254 TrkA-N domain MNQ97_01665 PF02080 TrkA-C domain MNQ97_01670 PF01189 16S rRNA methyltransferase RsmB/F MNQ97_01670 PF01029 NusB family MNQ97_01675 PF02911 Formyl transferase, C-terminal domain MNQ97_01675 PF00551 Formyl transferase MNQ97_01680 PF01327 Polypeptide deformylase MNQ97_01685 PF02481 DNA recombination-mediator protein A MNQ97_01685 PF17782 DprA winged helix domain MNQ97_01690 PF04361 Protein of unknown function (DUF494) MNQ97_01695 PF01396 Topoisomerase DNA binding C4 zinc finger MNQ97_01700 PF01300 Telomere recombination MNQ97_01705 PF08501 Shikimate dehydrogenase substrate binding domain MNQ97_01705 PF01488 Shikimate / quinate 5-dehydrogenase MNQ97_01705 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MNQ97_01710 PF00132 Bacterial transferase hexapeptide (six repeats) MNQ97_01755 PF04204 Homoserine O-succinyltransferase MNQ97_01760 PF01274 Malate synthase MNQ97_01765 PF00463 Isocitrate lyase family MNQ97_01770 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) MNQ97_01775 PF00108 Thiolase, N-terminal domain MNQ97_01775 PF02803 Thiolase, C-terminal domain MNQ97_01780 PF02667 Short chain fatty acid transporter MNQ97_01785 PF01144 Coenzyme A transferase MNQ97_01790 PF01144 Coenzyme A transferase MNQ97_01795 PF00072 Response regulator receiver domain MNQ97_01795 PF00158 Sigma-54 interaction domain MNQ97_01795 PF02954 Bacterial regulatory protein, Fis family MNQ97_01800 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_01800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_01800 PF00989 PAS fold MNQ97_01805 PF09339 IclR helix-turn-helix domain MNQ97_01805 PF01614 Bacterial transcriptional regulator MNQ97_01810 PF02310 B12 binding domain MNQ97_01810 PF02607 B12 binding domain MNQ97_01810 PF02965 Vitamin B12 dependent methionine synthase, activation domain MNQ97_01810 PF00809 Pterin binding enzyme MNQ97_01810 PF02574 Homocysteine S-methyltransferase MNQ97_01815 PF13332 Hemagglutinin repeat MNQ97_01815 PF05860 haemagglutination activity domain MNQ97_01825 PF01758 Sodium Bile acid symporter family MNQ97_01830 PF01842 ACT domain MNQ97_01830 PF00696 Amino acid kinase family MNQ97_01835 PF01527 Transposase MNQ97_01840 PF00665 Integrase core domain MNQ97_01840 PF13333 Integrase core domain MNQ97_01840 PF13276 HTH-like domain MNQ97_01845 PF00342 Phosphoglucose isomerase MNQ97_01850 PF06146 Phosphate-starvation-inducible E MNQ97_01855 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_01860 PF14785 Maltose transport system permease protein MalF P2 domain MNQ97_01860 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_01865 PF01547 Bacterial extracellular solute-binding protein MNQ97_01875 PF00005 ABC transporter MNQ97_01875 PF17912 MalK OB fold domain MNQ97_01880 PF02264 LamB porin MNQ97_01885 PF07148 Maltose operon periplasmic protein precursor (MalM) MNQ97_01895 PF04345 Chorismate lyase MNQ97_01900 PF01040 UbiA prenyltransferase family MNQ97_01905 PF01553 Acyltransferase MNQ97_01910 PF01219 Prokaryotic diacylglycerol kinase MNQ97_01915 PF01726 LexA DNA binding domain MNQ97_01915 PF00717 Peptidase S24-like MNQ97_01920 PF05532 CsbD-like MNQ97_01925 PF01475 Ferric uptake regulator family MNQ97_01930 PF01207 Dihydrouridine synthase (Dus) MNQ97_01935 PF09583 Phage shock protein G (Phageshock_PspG) MNQ97_01940 PF00107 Zinc-binding dehydrogenase MNQ97_01940 PF08240 Alcohol dehydrogenase GroES-like domain MNQ97_01945 PF03796 DnaB-like helicase C terminal domain MNQ97_01945 PF00772 DnaB-like helicase N terminal domain MNQ97_01950 PF00842 Alanine racemase, C-terminal domain MNQ97_01950 PF01168 Alanine racemase, N-terminal domain MNQ97_01955 PF00155 Aminotransferase class I and II MNQ97_01960 PF04237 YjbR MNQ97_01965 PF00005 ABC transporter MNQ97_01965 PF17755 UvrA DNA-binding domain MNQ97_01965 PF17760 UvrA interaction domain MNQ97_01970 PF00436 Single-strand binding protein family MNQ97_01975 PF07804 HipA-like C-terminal domain MNQ97_01975 PF13657 HipA N-terminal domain MNQ97_01990 PF00860 Permease family MNQ97_01995 PF00999 Sodium/hydrogen exchanger family MNQ97_02000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_02000 PF03466 LysR substrate binding domain MNQ97_02005 PF03788 LrgA family MNQ97_02015 PF00005 ABC transporter MNQ97_02020 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_02025 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_02030 PF00497 Bacterial extracellular solute-binding proteins, family 3 MNQ97_02040 PF03279 Bacterial lipid A biosynthesis acyltransferase MNQ97_02050 PF00005 ABC transporter MNQ97_02055 PF02653 Branched-chain amino acid transport system / permease component MNQ97_02060 PF02653 Branched-chain amino acid transport system / permease component MNQ97_02065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MNQ97_02065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MNQ97_02070 PF00571 CBS domain MNQ97_02070 PF01380 SIS domain MNQ97_02075 PF00939 Sodium:sulfate symporter transmembrane region MNQ97_02080 PF00313 'Cold-shock' DNA-binding domain MNQ97_02085 PF00313 'Cold-shock' DNA-binding domain MNQ97_02090 PF05433 Glycine zipper 2TM domain MNQ97_02095 PF02954 Bacterial regulatory protein, Fis family MNQ97_02100 PF01207 Dihydrouridine synthase (Dus) MNQ97_02110 PF00474 Sodium:solute symporter family MNQ97_02115 PF06196 Protein of unknown function (DUF997) MNQ97_02120 PF00289 Biotin carboxylase, N-terminal domain MNQ97_02120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MNQ97_02120 PF02785 Biotin carboxylase C-terminal domain MNQ97_02125 PF00364 Biotin-requiring enzyme MNQ97_02130 PF01220 Dehydroquinase class II MNQ97_02135 PF01794 Ferric reductase like transmembrane component MNQ97_02140 PF00174 Oxidoreductase molybdopterin binding domain MNQ97_02145 PF08240 Alcohol dehydrogenase GroES-like domain MNQ97_02145 PF00107 Zinc-binding dehydrogenase MNQ97_02150 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_02150 PF17157 Gammaproteobacterial periplasmic sensor domain MNQ97_02150 PF00563 EAL domain MNQ97_02160 PF04085 rod shape-determining protein MreC MNQ97_02165 PF04093 rod shape-determining protein MreD MNQ97_02170 PF02545 Maf-like protein MNQ97_02175 PF10150 Ribonuclease E/G family MNQ97_02175 PF00575 S1 RNA binding domain MNQ97_02180 PF13502 AsmA-like C-terminal region MNQ97_02180 PF13116 Protein of unknown function MNQ97_02185 PF00795 Carbon-nitrogen hydrolase MNQ97_02190 PF01523 Putative modulator of DNA gyrase MNQ97_02195 PF03466 LysR substrate binding domain MNQ97_02195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_02200 PF07869 Protein of unknown function (DUF1656) MNQ97_02205 PF13533 Biotin-lipoyl like MNQ97_02210 PF04632 Fusaric acid resistance protein family MNQ97_02215 PF00171 Aldehyde dehydrogenase family MNQ97_02225 PF01337 Barstar (barnase inhibitor) MNQ97_02230 PF04751 Protein of unknown function (DUF615) MNQ97_02235 PF01523 Putative modulator of DNA gyrase MNQ97_02240 PF07361 Cytochrome b562 MNQ97_02245 PF01272 Transcription elongation factor, GreA/GreB, C-term MNQ97_02245 PF14760 Rnk N-terminus MNQ97_02275 PF01979 Amidohydrolase family MNQ97_02280 PF03841 L-seryl-tRNA selenium transferase MNQ97_02285 PF07071 KDGP aldolase MNQ97_02290 PF05043 Mga helix-turn-helix domain MNQ97_02290 PF08279 HTH domain MNQ97_02290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MNQ97_02290 PF00874 PRD domain MNQ97_02295 PF01381 Helix-turn-helix MNQ97_02300 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB MNQ97_02305 PF00689 Cation transporting ATPase, C-terminus MNQ97_02305 PF00690 Cation transporter/ATPase, N-terminus MNQ97_02310 PF00356 Bacterial regulatory proteins, lacI family MNQ97_02315 PF00367 phosphotransferase system, EIIB MNQ97_02315 PF02378 Phosphotransferase system, EIIC MNQ97_02320 PF00128 Alpha amylase, catalytic domain MNQ97_02320 PF11941 Domain of unknown function (DUF3459) MNQ97_02335 PF04168 A predicted alpha-helical domain with a conserved ER motif. MNQ97_02335 PF14403 Circularly permuted ATP-grasp type 2 MNQ97_02340 PF14403 Circularly permuted ATP-grasp type 2 MNQ97_02345 PF01042 Endoribonuclease L-PSP MNQ97_02350 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain MNQ97_02350 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain MNQ97_02355 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MNQ97_02355 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MNQ97_02360 PF01370 NAD dependent epimerase/dehydratase family MNQ97_02365 PF07690 Major Facilitator Superfamily MNQ97_02370 PF00381 PTS HPr component phosphorylation site MNQ97_02375 PF03668 P-loop ATPase protein family MNQ97_02380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MNQ97_02385 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MNQ97_02390 PF04552 Sigma-54, DNA binding domain MNQ97_02390 PF04963 Sigma-54 factor, core binding domain MNQ97_02390 PF00309 Sigma-54 factor, Activator interacting domain (AID) MNQ97_02395 PF00005 ABC transporter MNQ97_02395 PF12399 Branched-chain amino acid ATP-binding cassette transporter MNQ97_02400 PF03968 OstA-like protein MNQ97_02405 PF06835 Lipopolysaccharide-assembly, LptC-related MNQ97_02415 PF00571 CBS domain MNQ97_02415 PF01380 SIS domain MNQ97_02420 PF01699 Sodium/calcium exchanger protein MNQ97_02425 PF00005 ABC transporter MNQ97_02430 PF02405 Permease MlaE MNQ97_02435 PF02470 MlaD protein MNQ97_02440 PF05494 MlaC protein MNQ97_02445 PF13466 STAS domain MNQ97_02450 PF01722 BolA-like protein MNQ97_02455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MNQ97_02460 PF13180 PDZ domain MNQ97_02465 PF13180 PDZ domain MNQ97_02465 PF00595 PDZ domain MNQ97_02470 PF06295 Protein of unknown function (DUF1043) MNQ97_02475 PF03969 AFG1-like ATPase MNQ97_02480 PF00572 Ribosomal protein L13 MNQ97_02485 PF00380 Ribosomal protein S9/S16 MNQ97_02490 PF00043 Glutathione S-transferase, C-terminal domain MNQ97_02490 PF02798 Glutathione S-transferase, N-terminal domain MNQ97_02495 PF04386 Stringent starvation protein B MNQ97_02505 PF07992 Pyridine nucleotide-disulphide oxidoreductase MNQ97_02505 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MNQ97_02510 PF04898 Glutamate synthase central domain MNQ97_02510 PF01493 GXGXG motif MNQ97_02510 PF01645 Conserved region in glutamate synthase MNQ97_02510 PF00310 Glutamine amidotransferases class-II MNQ97_02515 PF16199 Radical_SAM C-terminal domain MNQ97_02515 PF04055 Radical SAM superfamily MNQ97_02520 PF00072 Response regulator receiver domain MNQ97_02520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_02520 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_02520 PF18415 Histidine kinase receptor ArcB trans-membrane domain MNQ97_02520 PF00989 PAS fold MNQ97_02520 PF01627 Hpt domain MNQ97_02530 PF00912 Transglycosylase MNQ97_02535 PF04972 BON domain MNQ97_02540 PF13580 SIS domain MNQ97_02545 PF02021 Uncharacterised protein family UPF0102 MNQ97_02550 PF04348 LppC putative lipoprotein MNQ97_02555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MNQ97_02570 PF00107 Zinc-binding dehydrogenase MNQ97_02570 PF08240 Alcohol dehydrogenase GroES-like domain MNQ97_02575 PF17954 Quercetinase C-terminal cupin domain MNQ97_02575 PF02678 Pirin MNQ97_02580 PF03466 LysR substrate binding domain MNQ97_02580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_02585 PF13409 Glutathione S-transferase, N-terminal domain MNQ97_02590 PF07681 DoxX MNQ97_02595 PF13997 YqjK-like protein MNQ97_02600 PF07332 Putative Actinobacterial Holin-X, holin superfamily III MNQ97_02605 PF05957 Bacterial protein of unknown function (DUF883) MNQ97_02615 PF13721 SecD export protein N-terminal TM region MNQ97_02620 PF09335 SNARE associated Golgi protein MNQ97_02630 PF00392 Bacterial regulatory proteins, gntR family MNQ97_02630 PF07729 FCD domain MNQ97_02635 PF07690 Major Facilitator Superfamily MNQ97_02640 PF02614 Glucuronate isomerase MNQ97_02645 PF08125 Mannitol dehydrogenase C-terminal domain MNQ97_02645 PF01232 Mannitol dehydrogenase Rossmann domain MNQ97_02650 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus MNQ97_02650 PF08666 SAF domain MNQ97_02655 PF10688 Bacterial inner membrane protein MNQ97_02660 PF00375 Sodium:dicarboxylate symporter family MNQ97_02665 PF03741 Integral membrane protein TerC family MNQ97_02670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MNQ97_02675 PF01863 Protein of unknown function DUF45 MNQ97_02680 PF03212 Pertactin MNQ97_02680 PF03797 Autotransporter beta-domain MNQ97_02685 PF05175 Methyltransferase small domain MNQ97_02690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MNQ97_02690 PF07992 Pyridine nucleotide-disulphide oxidoreductase MNQ97_02700 PF08279 HTH domain MNQ97_02700 PF13280 WYL domain MNQ97_02705 PF00892 EamA-like transporter family MNQ97_02710 PF03729 Short repeat of unknown function (DUF308) MNQ97_02715 PF07690 Major Facilitator Superfamily MNQ97_02720 PF01638 HxlR-like helix-turn-helix MNQ97_02745 PF04542 Sigma-70 region 2 MNQ97_02745 PF04546 Sigma-70, non-essential region MNQ97_02745 PF03979 Sigma-70 factor, region 1.1 MNQ97_02745 PF00140 Sigma-70 factor, region 1.2 MNQ97_02745 PF04539 Sigma-70 region 3 MNQ97_02745 PF04545 Sigma-70, region 4 MNQ97_02750 PF10410 DnaB-helicase binding domain of primase MNQ97_02750 PF08278 DNA primase DnaG DnaB-binding MNQ97_02750 PF08275 DNA primase catalytic core, N-terminal domain MNQ97_02750 PF01807 CHC2 zinc finger MNQ97_02755 PF01165 Ribosomal protein S21 MNQ97_02760 PF00814 Glycoprotease family MNQ97_02765 PF02660 Glycerol-3-phosphate acyltransferase MNQ97_02770 PF02152 Dihydroneopterin aldolase MNQ97_02775 PF02673 Bacitracin resistance protein BacA MNQ97_02780 PF01966 HD domain MNQ97_02780 PF01743 Poly A polymerase head domain MNQ97_02780 PF12627 Probable RNA and SrmB- binding site of polymerase A MNQ97_02785 PF08239 Bacterial SH3 domain MNQ97_02790 PF01928 CYTH domain MNQ97_02795 PF08335 GlnD PII-uridylyltransferase MNQ97_02795 PF03710 Glutamate-ammonia ligase adenylyltransferase MNQ97_02800 PF00294 pfkB family carbohydrate kinase MNQ97_02800 PF01467 Cytidylyltransferase-like MNQ97_02805 PF13520 Amino acid permease MNQ97_02810 PF04380 Membrane fusogenic activity MNQ97_02815 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MNQ97_02820 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase MNQ97_02825 PF03738 Glutathionylspermidine synthase preATP-grasp MNQ97_02830 PF06693 Protein of unknown function (DUF1190) MNQ97_02835 PF02321 Outer membrane efflux protein MNQ97_02840 PF00293 NUDIX domain MNQ97_02845 PF06853 Protein of unknown function (DUF1249) MNQ97_02850 PF00149 Calcineurin-like phosphoesterase MNQ97_02855 PF05728 Uncharacterised protein family (UPF0227) MNQ97_02860 PF01751 Toprim domain MNQ97_02860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_02860 PF00986 DNA gyrase B subunit, carboxyl terminus MNQ97_02860 PF00204 DNA gyrase B MNQ97_02865 PF03466 LysR substrate binding domain MNQ97_02865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_02870 PF03992 Antibiotic biosynthesis monooxygenase MNQ97_02875 PF02525 Flavodoxin-like fold MNQ97_02880 PF00486 Transcriptional regulatory protein, C terminal MNQ97_02880 PF00072 Response regulator receiver domain MNQ97_02885 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_02885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_02885 PF00672 HAMP domain MNQ97_02890 PF01547 Bacterial extracellular solute-binding protein MNQ97_02905 PF03613 PTS system mannose/fructose/sorbose family IID component MNQ97_02910 PF03609 PTS system sorbose-specific iic component MNQ97_02915 PF03830 PTS system sorbose subfamily IIB component MNQ97_02920 PF03989 DNA gyrase C-terminal domain, beta-propeller MNQ97_02920 PF00521 DNA gyrase/topoisomerase IV, subunit A MNQ97_02925 PF01553 Acyltransferase MNQ97_02930 PF07731 Multicopper oxidase MNQ97_02930 PF07732 Multicopper oxidase MNQ97_02935 PF08497 Radical SAM N-terminal MNQ97_02935 PF11842 Domain of unknown function (DUF3362) MNQ97_02935 PF04055 Radical SAM superfamily MNQ97_02940 PF00248 Aldo/keto reductase family MNQ97_02945 PF00465 Iron-containing alcohol dehydrogenase MNQ97_02950 PF06719 AraC-type transcriptional regulator N-terminus MNQ97_02950 PF12833 Helix-turn-helix domain MNQ97_02955 PF09335 SNARE associated Golgi protein MNQ97_02960 PF01053 Cys/Met metabolism PLP-dependent enzyme MNQ97_02965 PF01618 MotA/TolQ/ExbB proton channel family MNQ97_02970 PF02472 Biopolymer transport protein ExbD/TolR MNQ97_03005 PF00437 Type II/IV secretion system protein MNQ97_03020 PF04972 BON domain MNQ97_03020 PF00263 Bacterial type II and III secretion system protein MNQ97_03020 PF13629 Pilus formation protein N terminal region MNQ97_03045 PF13532 2OG-Fe(II) oxygenase superfamily MNQ97_03050 PF00873 AcrB/AcrD/AcrF family MNQ97_03055 PF00529 HlyD membrane-fusion protein of T1SS MNQ97_03055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MNQ97_03075 PF11806 Domain of unknown function (DUF3327) MNQ97_03075 PF00756 Putative esterase MNQ97_03080 PF00005 ABC transporter MNQ97_03085 PF01032 FecCD transport family MNQ97_03090 PF01032 FecCD transport family MNQ97_03095 PF01497 Periplasmic binding protein MNQ97_03100 PF02203 Tar ligand binding domain homologue MNQ97_03100 PF00672 HAMP domain MNQ97_03100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MNQ97_03120 PF05433 Glycine zipper 2TM domain MNQ97_03125 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MNQ97_03125 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal MNQ97_03130 PF13247 4Fe-4S dicluster domain MNQ97_03135 PF03916 Polysulphide reductase, NrfD MNQ97_03140 PF00374 Nickel-dependent hydrogenase MNQ97_03145 PF01750 Hydrogenase maturation protease MNQ97_03150 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE MNQ97_03155 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MNQ97_03160 PF02492 CobW/HypB/UreG, nucleotide-binding domain MNQ97_03160 PF02492 CobW/HypB/UreG, nucleotide-binding domain MNQ97_03165 PF01455 HupF/HypC family MNQ97_03170 PF01924 Hydrogenase formation hypA family MNQ97_03175 PF00586 AIR synthase related protein, N-terminal domain MNQ97_03175 PF02769 AIR synthase related protein, C-terminal domain MNQ97_03180 PF07503 HypF finger MNQ97_03180 PF01300 Telomere recombination MNQ97_03180 PF17788 HypF Kae1-like domain MNQ97_03180 PF00708 Acylphosphatase MNQ97_03185 PF02110 Hydroxyethylthiazole kinase family MNQ97_03190 PF00563 EAL domain MNQ97_03190 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_03190 PF08447 PAS fold MNQ97_03190 PF08448 PAS fold MNQ97_03195 PF00324 Amino acid permease MNQ97_03200 PF06751 Ethanolamine ammonia lyase large subunit (EutB) MNQ97_03205 PF05985 Ethanolamine ammonia-lyase light chain (EutC) MNQ97_03210 PF00083 Sugar (and other) transporter MNQ97_03210 PF08946 Osmosensory transporter coiled coil MNQ97_03220 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_03230 PF03806 AbgT putative transporter family MNQ97_03235 PF01546 Peptidase family M20/M25/M40 MNQ97_03235 PF07687 Peptidase dimerisation domain MNQ97_03240 PF02690 Na+/Pi-cotransporter MNQ97_03245 PF01497 Periplasmic binding protein MNQ97_03250 PF01032 FecCD transport family MNQ97_03255 PF01032 FecCD transport family MNQ97_03260 PF00005 ABC transporter MNQ97_03265 PF00593 TonB dependent receptor MNQ97_03265 PF07715 TonB-dependent Receptor Plug Domain MNQ97_03270 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) MNQ97_03275 PF06276 Ferric iron reductase FhuF-like transporter MNQ97_03275 PF04183 IucA / IucC family MNQ97_03285 PF06276 Ferric iron reductase FhuF-like transporter MNQ97_03285 PF04183 IucA / IucC family MNQ97_03315 PF00529 HlyD membrane-fusion protein of T1SS MNQ97_03315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MNQ97_03320 PF04632 Fusaric acid resistance protein family MNQ97_03335 PF00687 Ribosomal protein L1p/L10e family MNQ97_03345 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_03345 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_03355 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_03355 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_03360 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_03360 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_03365 PF13953 PapC C-terminal domain MNQ97_03365 PF13954 PapC N-terminal domain MNQ97_03365 PF00577 Outer membrane usher protein MNQ97_03390 PF05977 Transmembrane secretion effector MNQ97_03395 PF02574 Homocysteine S-methyltransferase MNQ97_03400 PF00324 Amino acid permease MNQ97_03405 PF01545 Cation efflux family MNQ97_03405 PF16916 Dimerisation domain of Zinc Transporter MNQ97_03415 PF00501 AMP-binding enzyme MNQ97_03440 PF01292 Prokaryotic cytochrome b561 MNQ97_03445 PF13411 MerR HTH family regulatory protein MNQ97_03455 PF00106 short chain dehydrogenase MNQ97_03495 PF00563 EAL domain MNQ97_03495 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_03495 PF05231 MASE1 MNQ97_03495 PF08447 PAS fold MNQ97_03495 PF13426 PAS domain MNQ97_03495 PF08448 PAS fold MNQ97_03500 PF00294 pfkB family carbohydrate kinase MNQ97_03515 PF02056 Family 4 glycosyl hydrolase MNQ97_03515 PF11975 Family 4 glycosyl hydrolase C-terminal domain MNQ97_03520 PF00367 phosphotransferase system, EIIB MNQ97_03520 PF02378 Phosphotransferase system, EIIC MNQ97_03525 PF07702 UTRA domain MNQ97_03525 PF00392 Bacterial regulatory proteins, gntR family MNQ97_03530 PF03472 Autoinducer binding domain MNQ97_03530 PF00196 Bacterial regulatory proteins, luxR family MNQ97_03535 PF00765 Autoinducer synthase MNQ97_03540 PF00936 BMC domain MNQ97_03545 PF10662 Ethanolamine utilisation - propanediol utilisation MNQ97_03550 PF06249 Ethanolamine utilisation protein EutQ MNQ97_03555 PF01923 Cobalamin adenosyltransferase MNQ97_03560 PF01515 Phosphate acetyl/butaryl transferase MNQ97_03565 PF00936 BMC domain MNQ97_03570 PF03319 Ethanolamine utilisation protein EutN/carboxysome MNQ97_03575 PF00171 Aldehyde dehydrogenase family MNQ97_03585 PF00465 Iron-containing alcohol dehydrogenase MNQ97_03590 PF04346 Ethanolamine utilisation protein, EutH MNQ97_03595 PF06277 Ethanolamine utilisation protein EutA MNQ97_03600 PF06751 Ethanolamine ammonia lyase large subunit (EutB) MNQ97_03605 PF05985 Ethanolamine ammonia-lyase light chain (EutC) MNQ97_03610 PF00936 BMC domain MNQ97_03615 PF00936 BMC domain MNQ97_03615 PF16365 Ethanolamine utilization protein EutK C-terminus MNQ97_03630 PF12833 Helix-turn-helix domain MNQ97_03635 PF00294 pfkB family carbohydrate kinase MNQ97_03645 PF08244 Glycosyl hydrolases family 32 C terminal MNQ97_03645 PF00251 Glycosyl hydrolases family 32 N-terminal domain MNQ97_03655 PF08244 Glycosyl hydrolases family 32 C terminal MNQ97_03655 PF00251 Glycosyl hydrolases family 32 N-terminal domain MNQ97_03660 PF01306 LacY proton/sugar symporter MNQ97_03665 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MNQ97_03665 PF00356 Bacterial regulatory proteins, lacI family MNQ97_03685 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain MNQ97_03685 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain MNQ97_03685 PF01276 Orn/Lys/Arg decarboxylase, major domain MNQ97_03695 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain MNQ97_03695 PF01464 Transglycosylase SLT domain MNQ97_03700 PF04362 Bacterial Fe(2+) trafficking MNQ97_03705 PF14815 NUDIX domain MNQ97_03705 PF10576 Iron-sulfur binding domain of endonuclease III MNQ97_03705 PF00633 Helix-hairpin-helix motif MNQ97_03705 PF00730 HhH-GPD superfamily base excision DNA repair protein MNQ97_03710 PF02390 Putative methyltransferase MNQ97_03715 PF04320 Protein with unknown function (DUF469) MNQ97_03720 PF04960 Glutaminase MNQ97_03725 PF11101 Protein of unknown function (DUF2884) MNQ97_03730 PF06969 HemN C-terminal domain MNQ97_03730 PF04055 Radical SAM superfamily MNQ97_03735 PF01725 Ham1 family MNQ97_03740 PF02594 Uncharacterised ACR, YggU family COG1872 MNQ97_03745 PF02325 YGGT family MNQ97_03750 PF03807 NADP oxidoreductase coenzyme F420-dependent MNQ97_03750 PF14748 Pyrroline-5-carboxylate reductase dimerisation MNQ97_03755 PF01168 Alanine racemase, N-terminal domain MNQ97_03760 PF00437 Type II/IV secretion system protein MNQ97_03765 PF04371 Porphyromonas-type peptidyl-arginine deiminase MNQ97_03770 PF00795 Carbon-nitrogen hydrolase MNQ97_03775 PF03652 Holliday junction resolvase MNQ97_03780 PF02622 Uncharacterized ACR, COG1678 MNQ97_03785 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MNQ97_03785 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MNQ97_03790 PF04452 RNA methyltransferase MNQ97_03795 PF04231 Endonuclease I MNQ97_03800 PF10263 SprT-like family MNQ97_03800 PF17283 SprT-like zinc ribbon domain MNQ97_03810 PF04143 Sulphur transport MNQ97_03820 PF02773 S-adenosylmethionine synthetase, C-terminal domain MNQ97_03820 PF02772 S-adenosylmethionine synthetase, central domain MNQ97_03820 PF00438 S-adenosylmethionine synthetase, N-terminal domain MNQ97_03825 PF17810 Arginine decarboxylase helical bundle domain MNQ97_03825 PF17944 Arginine decarboxylase C-terminal helical extension MNQ97_03825 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MNQ97_03830 PF00355 Rieske [2Fe-2S] domain MNQ97_03835 PF01435 Peptidase family M48 MNQ97_03840 PF02779 Transketolase, pyrimidine binding domain MNQ97_03840 PF00456 Transketolase, thiamine diphosphate binding domain MNQ97_03840 PF02780 Transketolase, C-terminal domain MNQ97_03845 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MNQ97_03845 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MNQ97_03850 PF00162 Phosphoglycerate kinase MNQ97_03855 PF01116 Fructose-bisphosphate aldolase class-II MNQ97_03860 PF05552 Conserved TM helix MNQ97_03860 PF00924 Mechanosensitive ion channel MNQ97_03865 PF01810 LysE type translocator MNQ97_03870 PF04402 Protein of unknown function (DUF541) MNQ97_03875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_03875 PF03466 LysR substrate binding domain MNQ97_03880 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MNQ97_03885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MNQ97_03885 PF01842 ACT domain MNQ97_03885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MNQ97_03890 PF01812 5-formyltetrahydrofolate cyclo-ligase family MNQ97_03900 PF05164 Cell division protein ZapA MNQ97_03905 PF03695 Uncharacterised protein family (UPF0149) MNQ97_03910 PF05195 Aminopeptidase P, N-terminal domain MNQ97_03910 PF00557 Metallopeptidase family M24 MNQ97_03915 PF01494 FAD binding domain MNQ97_03920 PF01494 FAD binding domain MNQ97_03925 PF01571 Aminomethyltransferase folate-binding domain MNQ97_03925 PF08669 Glycine cleavage T-protein C-terminal barrel domain MNQ97_03930 PF01597 Glycine cleavage H-protein MNQ97_03935 PF02347 Glycine cleavage system P-protein MNQ97_03950 PF03006 Haemolysin-III related MNQ97_03955 PF01571 Aminomethyltransferase folate-binding domain MNQ97_03960 PF03937 Flavinator of succinate dehydrogenase MNQ97_03965 PF07254 Membrane-bound toxin component of toxin-antitoxin system MNQ97_03970 PF00486 Transcriptional regulatory protein, C terminal MNQ97_03970 PF00072 Response regulator receiver domain MNQ97_03975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_03975 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_03975 PF00672 HAMP domain MNQ97_03980 PF06123 Inner membrane protein CreD MNQ97_03985 PF00258 Flavodoxin MNQ97_03990 PF02899 Phage integrase, N-terminal SAM-like domain MNQ97_03990 PF00589 Phage integrase family MNQ97_03995 PF10411 Disulfide bond isomerase protein N-terminus MNQ97_03995 PF13098 Thioredoxin-like domain MNQ97_04000 PF17768 RecJ OB domain MNQ97_04000 PF02272 DHHA1 domain MNQ97_04000 PF01368 DHH family MNQ97_04010 PF00152 tRNA synthetases class II (D, K and N) MNQ97_04010 PF01336 OB-fold nucleic acid binding domain MNQ97_04020 PF13356 Arm DNA-binding domain MNQ97_04020 PF14659 Phage integrase, N-terminal SAM-like domain MNQ97_04020 PF00589 Phage integrase family MNQ97_04040 PF09134 Invasin, domain 3 MNQ97_04040 PF07979 Intimin C-type lectin domain MNQ97_04040 PF11924 Inverse autotransporter, beta-domain MNQ97_04040 PF02369 Bacterial Ig-like domain (group 1) MNQ97_04050 PF00419 Fimbrial protein MNQ97_04055 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_04055 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_04060 PF13954 PapC N-terminal domain MNQ97_04060 PF13953 PapC C-terminal domain MNQ97_04060 PF00577 Outer membrane usher protein MNQ97_04090 PF02001 Protein of unknown function DUF134 MNQ97_04100 PF13018 Extended Signal Peptide of Type V secretion system MNQ97_04100 PF13332 Hemagglutinin repeat MNQ97_04100 PF04829 Pre-toxin domain with VENN motif MNQ97_04100 PF05860 haemagglutination activity domain MNQ97_04135 PF01926 50S ribosome-binding GTPase MNQ97_04155 PF06067 Domain of unknown function (DUF932) MNQ97_04160 PF03230 Antirestriction protein MNQ97_04165 PF04002 RadC-like JAB domain MNQ97_04170 PF06755 CbtA_toxin of type IV toxin-antitoxin system MNQ97_04175 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A MNQ97_04190 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_04190 PF08448 PAS fold MNQ97_04195 PF01037 Lrp/AsnC ligand binding domain MNQ97_04205 PF01055 Glycosyl hydrolases family 31 MNQ97_04205 PF13802 Galactose mutarotase-like MNQ97_04205 PF17137 Domain of unknown function (DUF5110) MNQ97_04205 PF16338 Domain of unknown function (DUF4968) MNQ97_04210 PF07690 Major Facilitator Superfamily MNQ97_04220 PF01556 DnaJ C terminal domain MNQ97_04220 PF00226 DnaJ domain MNQ97_04235 PF01638 HxlR-like helix-turn-helix MNQ97_04240 PF00484 Carbonic anhydrase MNQ97_04255 PF00263 Bacterial type II and III secretion system protein MNQ97_04255 PF03958 Bacterial type II/III secretion system short domain MNQ97_04260 PF00437 Type II/IV secretion system protein MNQ97_04265 PF00482 Type II secretion system (T2SS), protein F MNQ97_04270 PF08334 Type II secretion system (T2SS), protein G MNQ97_04270 PF07963 Prokaryotic N-terminal methylation motif MNQ97_04275 PF02501 Type II secretion system (T2SS), protein I MNQ97_04275 PF07963 Prokaryotic N-terminal methylation motif MNQ97_04280 PF11612 Type II secretion system (T2SS), protein J MNQ97_04280 PF07963 Prokaryotic N-terminal methylation motif MNQ97_04300 PF01478 Type IV leader peptidase family MNQ97_04300 PF06750 Bacterial Peptidase A24 N-terminal domain MNQ97_04320 PF00672 HAMP domain MNQ97_04320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MNQ97_04320 PF02203 Tar ligand binding domain homologue MNQ97_04335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_04335 PF03466 LysR substrate binding domain MNQ97_04340 PF03466 LysR substrate binding domain MNQ97_04340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_04345 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MNQ97_04345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MNQ97_04350 PF00356 Bacterial regulatory proteins, lacI family MNQ97_04355 PF00356 Bacterial regulatory proteins, lacI family MNQ97_04360 PF01568 Molydopterin dinucleotide binding domain MNQ97_04360 PF00384 Molybdopterin oxidoreductase MNQ97_04365 PF00501 AMP-binding enzyme MNQ97_04365 PF01553 Acyltransferase MNQ97_04365 PF13193 AMP-binding enzyme C-terminal domain MNQ97_04370 PF07690 Major Facilitator Superfamily MNQ97_04375 PF00248 Aldo/keto reductase family MNQ97_04385 PF03741 Integral membrane protein TerC family MNQ97_04390 PF02976 DNA mismatch repair enzyme MutH MNQ97_04395 PF00293 NUDIX domain MNQ97_04400 PF05524 PEP-utilising enzyme, N-terminal MNQ97_04400 PF01590 GAF domain MNQ97_04400 PF02896 PEP-utilising enzyme, TIM barrel domain MNQ97_04400 PF00391 PEP-utilising enzyme, mobile domain MNQ97_04405 PF01790 Prolipoprotein diacylglyceryl transferase MNQ97_04410 PF00303 Thymidylate synthase MNQ97_04415 PF07963 Prokaryotic N-terminal methylation motif MNQ97_04420 PF07963 Prokaryotic N-terminal methylation motif MNQ97_04435 PF17946 RecC C-terminal domain MNQ97_04440 PF00675 Insulinase (Peptidase family M16) MNQ97_04440 PF16187 Middle or third domain of peptidase_M16 MNQ97_04440 PF05193 Peptidase M16 inactive domain MNQ97_04445 PF13361 UvrD-like helicase C-terminal domain MNQ97_04445 PF00580 UvrD/REP helicase N-terminal domain MNQ97_04445 PF12705 PD-(D/E)XK nuclease superfamily MNQ97_04450 PF13538 UvrD-like helicase C-terminal domain MNQ97_04455 PF00696 Amino acid kinase family MNQ97_04455 PF00583 Acetyltransferase (GNAT) family MNQ97_04460 PF11741 AMIN domain MNQ97_04460 PF01520 N-acetylmuramoyl-L-alanine amidase MNQ97_04480 PF03562 MltA specific insert domain MNQ97_04480 PF06725 3D domain MNQ97_04485 PF00899 ThiF family MNQ97_04490 PF02657 Fe-S metabolism associated domain MNQ97_04495 PF00266 Aminotransferase class-V MNQ97_04500 PF06004 Bacterial protein of unknown function (DUF903) MNQ97_04505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_04505 PF03466 LysR substrate binding domain MNQ97_04510 PF04241 Protein of unknown function (DUF423) MNQ97_04515 PF18125 RlmM ferredoxin-like domain MNQ97_04515 PF01728 FtsJ-like methyltransferase MNQ97_04520 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MNQ97_04520 PF01367 5'-3' exonuclease, C-terminal SAM fold MNQ97_04525 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases MNQ97_04525 PF03641 Possible lysine decarboxylase MNQ97_04525 PF11892 Domain of unknown function (DUF3412) MNQ97_04530 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term MNQ97_04530 PF14489 QueF-like protein MNQ97_04535 PF07348 Syd protein (SUKH-2) MNQ97_04540 PF04287 tRNA pseudouridine synthase C MNQ97_04545 PF00849 RNA pseudouridylate synthase MNQ97_04550 PF00258 Flavodoxin MNQ97_04555 PF11944 Protein of unknown function (DUF3461) MNQ97_04560 PF00132 Bacterial transferase hexapeptide (six repeats) MNQ97_04560 PF14602 Hexapeptide repeat of succinyl-transferase MNQ97_04560 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MNQ97_04565 PF01842 ACT domain MNQ97_04565 PF01966 HD domain MNQ97_04565 PF01909 Nucleotidyltransferase domain MNQ97_04565 PF08335 GlnD PII-uridylyltransferase MNQ97_04570 PF00557 Metallopeptidase family M24 MNQ97_04575 PF00318 Ribosomal protein S2 MNQ97_04580 PF00889 Elongation factor TS MNQ97_04585 PF00696 Amino acid kinase family MNQ97_04590 PF01765 Ribosome recycling factor MNQ97_04595 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MNQ97_04595 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MNQ97_04595 PF13288 DXP reductoisomerase C-terminal domain MNQ97_04600 PF01255 Putative undecaprenyl diphosphate synthase MNQ97_04610 PF02163 Peptidase family M50 MNQ97_04610 PF17820 PDZ domain MNQ97_04615 PF07244 Surface antigen variable number repeat MNQ97_04615 PF01103 Surface antigen MNQ97_04620 PF03938 Outer membrane protein (OmpH-like) MNQ97_04625 PF00132 Bacterial transferase hexapeptide (six repeats) MNQ97_04625 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MNQ97_04630 PF07977 FabA-like domain MNQ97_04635 PF00132 Bacterial transferase hexapeptide (six repeats) MNQ97_04635 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MNQ97_04640 PF02684 Lipid-A-disaccharide synthetase MNQ97_04645 PF01351 Ribonuclease HII MNQ97_04650 PF02811 PHP domain MNQ97_04650 PF14579 Helix-hairpin-helix motif MNQ97_04650 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MNQ97_04650 PF07733 Bacterial DNA polymerase III alpha NTPase domain MNQ97_04650 PF01336 OB-fold nucleic acid binding domain MNQ97_04655 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MNQ97_04660 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain MNQ97_04660 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain MNQ97_04660 PF01276 Orn/Lys/Arg decarboxylase, major domain MNQ97_04665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MNQ97_04670 PF01171 PP-loop family MNQ97_04670 PF09179 TilS substrate binding domain MNQ97_04670 PF11734 TilS substrate C-terminal domain MNQ97_04675 PF00034 Cytochrome c MNQ97_04680 PF07073 Modulator of Rho-dependent transcription termination (ROF) MNQ97_04685 PF06786 Uncharacterised protein family (UPF0253) MNQ97_04690 PF07152 YaeQ protein MNQ97_04695 PF00472 RF-1 domain MNQ97_04700 PF17185 NlpE C-terminal OB domain MNQ97_04700 PF04170 NlpE N-terminal domain MNQ97_04705 PF04073 Aminoacyl-tRNA editing domain MNQ97_04705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MNQ97_04705 PF03129 Anticodon binding domain MNQ97_04710 PF18389 TrmO C-terminal domain MNQ97_04710 PF01980 tRNA-methyltransferase O MNQ97_04715 PF16358 RcsF lipoprotein MNQ97_04720 PF03180 NLPA lipoprotein MNQ97_04725 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_04730 PF00005 ABC transporter MNQ97_04730 PF09383 NIL domain MNQ97_04795 PF00550 Phosphopantetheine attachment site MNQ97_04810 PF07977 FabA-like domain MNQ97_04840 PF00109 Beta-ketoacyl synthase, N-terminal domain MNQ97_04840 PF02801 Beta-ketoacyl synthase, C-terminal domain MNQ97_04855 PF02801 Beta-ketoacyl synthase, C-terminal domain MNQ97_04855 PF00109 Beta-ketoacyl synthase, N-terminal domain MNQ97_04860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_04860 PF03466 LysR substrate binding domain MNQ97_04865 PF07690 Major Facilitator Superfamily MNQ97_04870 PF03372 Endonuclease/Exonuclease/phosphatase family MNQ97_04875 PF01476 LysM domain MNQ97_04875 PF01464 Transglycosylase SLT domain MNQ97_04880 PF16123 Hydroxyacylglutathione hydrolase C-terminus MNQ97_04880 PF00753 Metallo-beta-lactamase superfamily MNQ97_04885 PF08241 Methyltransferase domain MNQ97_04890 PF00075 RNase H MNQ97_04895 PF00929 Exonuclease MNQ97_04905 PF02369 Bacterial Ig-like domain (group 1) MNQ97_04905 PF11924 Inverse autotransporter, beta-domain MNQ97_04905 PF09134 Invasin, domain 3 MNQ97_04925 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MNQ97_04930 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_04935 PF00571 CBS domain MNQ97_04935 PF00005 ABC transporter MNQ97_04940 PF00268 Ribonucleotide reductase, small chain MNQ97_04945 PF08343 Ribonucleotide reductase N-terminal MNQ97_04945 PF00317 Ribonucleotide reductase, all-alpha domain MNQ97_04945 PF02867 Ribonucleotide reductase, barrel domain MNQ97_04950 PF07972 NrdI Flavodoxin like MNQ97_04955 PF00462 Glutaredoxin MNQ97_04965 PF05957 Bacterial protein of unknown function (DUF883) MNQ97_04970 PF06392 Acid shock protein repeat MNQ97_04980 PF12833 Helix-turn-helix domain MNQ97_04985 PF09400 Protein of unknown function (DUF2002) MNQ97_04990 PF06711 Protein of unknown function (DUF1198) MNQ97_05000 PF00313 'Cold-shock' DNA-binding domain MNQ97_05005 PF01965 DJ-1/PfpI family MNQ97_05025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MNQ97_05030 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_05035 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_05035 PF12911 N-terminal TM domain of oligopeptide transport permease C MNQ97_05040 PF00005 ABC transporter MNQ97_05040 PF17845 FbpC C-terminal regulatory nucleotide binding domain MNQ97_05045 PF00005 ABC transporter MNQ97_05050 PF00547 Urease, gamma subunit MNQ97_05055 PF00699 Urease beta subunit MNQ97_05060 PF01979 Amidohydrolase family MNQ97_05060 PF00449 Urease alpha-subunit, N-terminal domain MNQ97_05065 PF05194 UreE urease accessory protein, C-terminal domain MNQ97_05065 PF02814 UreE urease accessory protein, N-terminal domain MNQ97_05070 PF01730 UreF MNQ97_05075 PF02492 CobW/HypB/UreG, nucleotide-binding domain MNQ97_05080 PF01774 UreD urease accessory protein MNQ97_05085 PF03253 Urea transporter MNQ97_05090 PF03824 High-affinity nickel-transport protein MNQ97_05095 PF06411 HdeA/HdeB family MNQ97_05100 PF07885 Ion channel MNQ97_05100 PF02254 TrkA-N domain MNQ97_05105 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MNQ97_05110 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MNQ97_05115 PF00248 Aldo/keto reductase family MNQ97_05120 PF07995 Glucose / Sorbosone dehydrogenase MNQ97_05125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MNQ97_05130 PF02378 Phosphotransferase system, EIIC MNQ97_05135 PF00232 Glycosyl hydrolase family 1 MNQ97_05140 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit MNQ97_05145 PF12833 Helix-turn-helix domain MNQ97_05145 PF07883 Cupin domain MNQ97_05150 PF04794 YdjC-like protein MNQ97_05170 PF17345 Family of unknown function (DUF5375) MNQ97_05200 PF04606 Ogr/Delta-like zinc finger MNQ97_05225 PF13356 Arm DNA-binding domain MNQ97_05225 PF00589 Phage integrase family MNQ97_05235 PF01668 SmpB protein MNQ97_05240 PF03364 Polyketide cyclase / dehydrase and lipid transport MNQ97_05245 PF03658 RnfH family Ubiquitin MNQ97_05250 PF04355 SmpA / OmlA family MNQ97_05255 PF02463 RecF/RecN/SMC N terminal domain MNQ97_05260 PF01513 ATP-NAD kinase MNQ97_05265 PF01025 GrpE MNQ97_05270 PF03167 Uracil DNA glycosylase superfamily MNQ97_05275 PF01228 Glycine radical MNQ97_05285 PF12796 Ankyrin repeats (3 copies) MNQ97_05290 PF00270 DEAD/DEAH box helicase MNQ97_05290 PF00271 Helicase conserved C-terminal domain MNQ97_05295 PF05175 Methyltransferase small domain MNQ97_05300 PF02910 Fumarate reductase flavoprotein C-term MNQ97_05300 PF00890 FAD binding domain MNQ97_05305 PF08281 Sigma-70, region 4 MNQ97_05305 PF04542 Sigma-70 region 2 MNQ97_05310 PF03873 Anti sigma-E protein RseA, C-terminal domain MNQ97_05310 PF03872 Anti sigma-E protein RseA, N-terminal domain MNQ97_05315 PF03888 MucB/RseB N-terminal domain MNQ97_05315 PF17188 MucB/RseB C-terminal domain MNQ97_05330 PF00679 Elongation factor G C-terminus MNQ97_05330 PF00009 Elongation factor Tu GTP binding domain MNQ97_05330 PF03144 Elongation factor Tu domain 2 MNQ97_05330 PF06421 GTP-binding protein LepA C-terminus MNQ97_05335 PF10502 Signal peptidase, peptidase S26 MNQ97_05340 PF00035 Double-stranded RNA binding motif MNQ97_05340 PF14622 Ribonuclease-III-like MNQ97_05345 PF01926 50S ribosome-binding GTPase MNQ97_05345 PF07650 KH domain MNQ97_05350 PF02565 Recombination protein O C terminal MNQ97_05350 PF11967 Recombination protein O N terminal MNQ97_05355 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MNQ97_05360 PF01648 4'-phosphopantetheinyl transferase superfamily MNQ97_05365 PF12838 4Fe-4S dicluster domain MNQ97_05370 PF01418 Helix-turn-helix domain, rpiR family MNQ97_05370 PF01380 SIS domain MNQ97_05375 PF01380 SIS domain MNQ97_05395 PF14437 MafB19-like deaminase MNQ97_05400 PF00497 Bacterial extracellular solute-binding proteins, family 3 MNQ97_05400 PF01464 Transglycosylase SLT domain MNQ97_05405 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MNQ97_05405 PF02769 AIR synthase related protein, C-terminal domain MNQ97_05405 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MNQ97_05415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_05415 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_05420 PF13942 YfhG lipoprotein MNQ97_05425 PF00072 Response regulator receiver domain MNQ97_05425 PF00158 Sigma-54 interaction domain MNQ97_05430 PF00795 Carbon-nitrogen hydrolase MNQ97_05430 PF02540 NAD synthase MNQ97_05435 PF00543 Nitrogen regulatory protein P-II MNQ97_05440 PF10797 Protein of unknown function MNQ97_05445 PF10941 Protein of unknown function DUF2620 MNQ97_05450 PF02126 Phosphotriesterase family MNQ97_05455 PF01168 Alanine racemase, N-terminal domain MNQ97_05465 PF14502 Helix-turn-helix domain MNQ97_05465 PF14503 YhfZ C-terminal domain MNQ97_05470 PF00970 Oxidoreductase FAD-binding domain MNQ97_05470 PF00042 Globin MNQ97_05470 PF00175 Oxidoreductase NAD-binding domain MNQ97_05475 PF00464 Serine hydroxymethyltransferase MNQ97_05480 PF12832 MFS_1 like family MNQ97_05485 PF00874 PRD domain MNQ97_05490 PF06226 Protein of unknown function (DUF1007) MNQ97_05495 PF03824 High-affinity nickel-transport protein MNQ97_05500 PF00459 Inositol monophosphatase family MNQ97_05505 PF00588 SpoU rRNA Methylase family MNQ97_05510 PF02082 Transcriptional regulator MNQ97_05515 PF00266 Aminotransferase class-V MNQ97_05520 PF01592 NifU-like N terminal domain MNQ97_05525 PF01521 Iron-sulphur cluster biosynthesis MNQ97_05530 PF00226 DnaJ domain MNQ97_05530 PF07743 HSCB C-terminal oligomerisation domain MNQ97_05535 PF00012 Hsp70 protein MNQ97_05540 PF00111 2Fe-2S iron-sulfur cluster binding domain MNQ97_05545 PF04384 Iron-sulphur cluster assembly MNQ97_05550 PF12404 Peptidase MNQ97_05550 PF00883 Cytosol aminopeptidase family, catalytic domain MNQ97_05555 PF07179 SseB protein N-terminal domain MNQ97_05555 PF14581 SseB protein C-terminal domain MNQ97_05560 PF16168 Adhesin of bacterial autotransporter system, probable stalk MNQ97_05560 PF03797 Autotransporter beta-domain MNQ97_05560 PF03212 Pertactin MNQ97_05565 PF00207 Alpha-2-macroglobulin family MNQ97_05565 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain MNQ97_05565 PF07703 Alpha-2-macroglobulin bait region domain MNQ97_05565 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain MNQ97_05565 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain MNQ97_05565 PF17962 Bacterial macroglobulin domain 6 MNQ97_05565 PF01835 MG2 domain MNQ97_05565 PF07678 A-macroglobulin TED domain MNQ97_05565 PF11974 Bacterial alpha-2-macroglobulin MG3 domain MNQ97_05570 PF06832 Penicillin-Binding Protein C-terminus Family MNQ97_05570 PF00912 Transglycosylase MNQ97_05570 PF00905 Penicillin binding protein transpeptidase domain MNQ97_05580 PF00334 Nucleoside diphosphate kinase MNQ97_05585 PF04055 Radical SAM superfamily MNQ97_05595 PF13464 Domain of unknown function (DUF4115) MNQ97_05600 PF04551 GcpE protein MNQ97_05605 PF03129 Anticodon binding domain MNQ97_05605 PF13393 Histidyl-tRNA synthetase MNQ97_05610 PF09976 Tetratricopeptide repeat-like domain MNQ97_05615 PF13360 PQQ-like domain MNQ97_05620 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MNQ97_05620 PF01926 50S ribosome-binding GTPase MNQ97_05630 PF07191 zinc-ribbons MNQ97_05635 PF02601 Exonuclease VII, large subunit MNQ97_05635 PF13742 OB-fold nucleic acid binding domain MNQ97_05640 PF00571 CBS domain MNQ97_05640 PF00478 IMP dehydrogenase / GMP reductase domain MNQ97_05645 PF00117 Glutamine amidotransferase class-I MNQ97_05645 PF00958 GMP synthase C terminal domain MNQ97_05645 PF02540 NAD synthase MNQ97_05665 PF08543 Phosphomethylpyrimidine kinase MNQ97_05680 PF00571 CBS domain MNQ97_05680 PF01380 SIS domain MNQ97_05685 PF00455 DeoR C terminal sensor domain MNQ97_05685 PF08220 DeoR-like helix-turn-helix domain MNQ97_05690 PF06923 Glucitol operon activator protein (GutM) MNQ97_05695 PF00106 short chain dehydrogenase MNQ97_05700 PF03829 PTS system glucitol/sorbitol-specific IIA component MNQ97_05705 PF07663 Sorbitol phosphotransferase enzyme II C-terminus MNQ97_05705 PF03612 Sorbitol phosphotransferase enzyme II N-terminus MNQ97_05710 PF03608 PTS system enzyme II sorbitol-specific factor MNQ97_05715 PF00781 Diacylglycerol kinase catalytic domain MNQ97_05720 PF01136 Peptidase family U32 MNQ97_05720 PF16325 Peptidase family U32 C-terminal domain MNQ97_05725 PF07411 Domain of unknown function (DUF1508) MNQ97_05730 PF00072 Response regulator receiver domain MNQ97_05730 PF00486 Transcriptional regulatory protein, C terminal MNQ97_05735 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_05735 PF00672 HAMP domain MNQ97_05735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_05740 PF00873 AcrB/AcrD/AcrF family MNQ97_05745 PF00873 AcrB/AcrD/AcrF family MNQ97_05750 PF13533 Biotin-lipoyl like MNQ97_05755 PF00012 Hsp70 protein MNQ97_05760 PF13426 PAS domain MNQ97_05760 PF08448 PAS fold MNQ97_05760 PF05231 MASE1 MNQ97_05760 PF08447 PAS fold MNQ97_05760 PF00563 EAL domain MNQ97_05760 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_05765 PF01769 Divalent cation transporter MNQ97_05765 PF00571 CBS domain MNQ97_05765 PF03448 MgtE intracellular N domain MNQ97_05775 PF02541 Ppx/GppA phosphatase family MNQ97_05780 PF02503 Polyphosphate kinase middle domain MNQ97_05780 PF13090 Polyphosphate kinase C-terminal domain 2 MNQ97_05780 PF17941 Polyphosphate kinase C-terminal domain 1 MNQ97_05780 PF13089 Polyphosphate kinase N-terminal domain MNQ97_05785 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_05790 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_05795 PF00005 ABC transporter MNQ97_05810 PF13302 Acetyltransferase (GNAT) domain MNQ97_05815 PF00551 Formyl transferase MNQ97_05820 PF00586 AIR synthase related protein, N-terminal domain MNQ97_05820 PF02769 AIR synthase related protein, C-terminal domain MNQ97_05830 PF00860 Permease family MNQ97_05835 PF00308 Bacterial dnaA protein MNQ97_05840 PF03960 ArsC family MNQ97_05845 PF07720 Tetratricopeptide repeat MNQ97_05845 PF01435 Peptidase family M48 MNQ97_05850 PF01594 AI-2E family transporter MNQ97_05855 PF00578 AhpC/TSA family MNQ97_05860 PF01842 ACT domain MNQ97_05865 PF00701 Dihydrodipicolinate synthetase family MNQ97_05870 PF06804 NlpB/DapX lipoprotein MNQ97_05875 PF01259 SAICAR synthetase MNQ97_05880 PF04228 Putative neutral zinc metallopeptidase MNQ97_05885 PF04284 Protein of unknown function (DUF441) MNQ97_05890 PF13718 GNAT acetyltransferase 2 MNQ97_05890 PF05127 Helicase MNQ97_05890 PF17176 tRNA-binding domain MNQ97_05905 PF02230 Phospholipase/Carboxylesterase MNQ97_05910 PF13980 Uncharacterised protein family (UPF0370) MNQ97_05915 PF02557 D-alanyl-D-alanine carboxypeptidase MNQ97_05920 PF07687 Peptidase dimerisation domain MNQ97_05920 PF01546 Peptidase family M20/M25/M40 MNQ97_05925 PF03960 ArsC family MNQ97_05935 PF00873 AcrB/AcrD/AcrF family MNQ97_05945 PF00196 Bacterial regulatory proteins, luxR family MNQ97_05945 PF00072 Response regulator receiver domain MNQ97_05950 PF00037 4Fe-4S binding domain MNQ97_05950 PF12800 4Fe-4S binding domain MNQ97_05950 PF13187 4Fe-4S dicluster domain MNQ97_05955 PF03927 NapD protein MNQ97_05960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MNQ97_05960 PF01568 Molydopterin dinucleotide binding domain MNQ97_05960 PF10518 TAT (twin-arginine translocation) pathway signal sequence MNQ97_05960 PF00384 Molybdopterin oxidoreductase MNQ97_05965 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) MNQ97_05970 PF03264 NapC/NirT cytochrome c family, N-terminal region MNQ97_05980 PF05016 ParE toxin of type II toxin-antitoxin system, parDE MNQ97_05985 PF00293 NUDIX domain MNQ97_05990 PF03949 Malic enzyme, NAD binding domain MNQ97_05990 PF00390 Malic enzyme, N-terminal domain MNQ97_05990 PF01515 Phosphate acetyl/butaryl transferase MNQ97_05995 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 MNQ97_06000 PF01218 Coproporphyrinogen III oxidase MNQ97_06005 PF00583 Acetyltransferase (GNAT) family MNQ97_06010 PF04076 Bacterial OB fold (BOF) protein MNQ97_06015 PF06572 Protein of unknown function (DUF1131) MNQ97_06020 PF04261 Dyp-type peroxidase family MNQ97_06030 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_06035 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_06040 PF00005 ABC transporter MNQ97_06045 PF00291 Pyridoxal-phosphate dependent enzyme MNQ97_06055 PF02563 Polysaccharide biosynthesis/export protein MNQ97_06055 PF10531 SLBB domain MNQ97_06060 PF05159 Capsule polysaccharide biosynthesis protein MNQ97_06065 PF05159 Capsule polysaccharide biosynthesis protein MNQ97_06075 PF00535 Glycosyl transferase family 2 MNQ97_06075 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase MNQ97_06080 PF11380 Stealth protein CR2, conserved region 2 MNQ97_06080 PF17101 Stealth protein CR1, conserved region 1 MNQ97_06085 PF00005 ABC transporter MNQ97_06090 PF01061 ABC-2 type transporter MNQ97_06095 PF00005 ABC transporter MNQ97_06095 PF02687 FtsX-like permease family MNQ97_06095 PF12704 MacB-like periplasmic core domain MNQ97_06100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MNQ97_06105 PF00072 Response regulator receiver domain MNQ97_06105 PF00486 Transcriptional regulatory protein, C terminal MNQ97_06110 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_06110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_06110 PF16527 Two-component sensor protein CpxA, periplasmic domain MNQ97_06110 PF00672 HAMP domain MNQ97_06115 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MNQ97_06120 PF00391 PEP-utilising enzyme, mobile domain MNQ97_06120 PF02896 PEP-utilising enzyme, TIM barrel domain MNQ97_06120 PF05524 PEP-utilising enzyme, N-terminal MNQ97_06125 PF00381 PTS HPr component phosphorylation site MNQ97_06130 PF00291 Pyridoxal-phosphate dependent enzyme MNQ97_06140 PF04354 ZipA, C-terminal FtsZ-binding domain MNQ97_06145 PF03120 NAD-dependent DNA ligase OB-fold domain MNQ97_06145 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MNQ97_06145 PF12826 Helix-hairpin-helix motif MNQ97_06145 PF00533 BRCA1 C Terminus (BRCT) domain MNQ97_06145 PF01653 NAD-dependent DNA ligase adenylation domain MNQ97_06150 PF12843 Putative quorum-sensing-regulated virulence factor MNQ97_06175 PF00749 tRNA synthetases class I (E and Q), catalytic domain MNQ97_06210 PF07670 Nucleoside recognition MNQ97_06210 PF01773 Na+ dependent nucleoside transporter N-terminus MNQ97_06210 PF07662 Na+ dependent nucleoside transporter C-terminus MNQ97_06215 PF01566 Natural resistance-associated macrophage protein MNQ97_06225 PF00248 Aldo/keto reductase family MNQ97_06230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_06230 PF03466 LysR substrate binding domain MNQ97_06240 PF02685 Glucokinase MNQ97_06245 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system MNQ97_06255 PF07690 Major Facilitator Superfamily MNQ97_06260 PF04397 LytTr DNA-binding domain MNQ97_06260 PF00072 Response regulator receiver domain MNQ97_06265 PF07694 5TMR of 5TMR-LYT MNQ97_06265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_06265 PF06580 Histidine kinase MNQ97_06270 PF07350 Protein of unknown function (DUF1479) MNQ97_06280 PF00155 Aminotransferase class I and II MNQ97_06300 PF02613 Nitrate reductase delta subunit MNQ97_06305 PF04976 DMSO reductase anchor subunit (DmsC) MNQ97_06310 PF13247 4Fe-4S dicluster domain MNQ97_06310 PF12800 4Fe-4S binding domain MNQ97_06315 PF01568 Molydopterin dinucleotide binding domain MNQ97_06315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MNQ97_06315 PF00384 Molybdopterin oxidoreductase MNQ97_06320 PF03123 CAT RNA binding domain MNQ97_06320 PF00874 PRD domain MNQ97_06325 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MNQ97_06325 PF00367 phosphotransferase system, EIIB MNQ97_06325 PF02378 Phosphotransferase system, EIIC MNQ97_06330 PF00232 Glycosyl hydrolase family 1 MNQ97_06335 PF04966 Carbohydrate-selective porin, OprB family MNQ97_06345 PF00005 ABC transporter MNQ97_06350 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_06360 PF13332 Hemagglutinin repeat MNQ97_06360 PF05594 Haemagluttinin repeat MNQ97_06360 PF14436 Bacterial EndoU nuclease MNQ97_06360 PF05860 haemagglutination activity domain MNQ97_06360 PF04829 Pre-toxin domain with VENN motif MNQ97_06370 PF13406 Transglycosylase SLT domain MNQ97_06375 PF00324 Amino acid permease MNQ97_06380 PF07969 Amidohydrolase family MNQ97_06390 PF07690 Major Facilitator Superfamily MNQ97_06395 PF02405 Permease MlaE MNQ97_06400 PF00005 ABC transporter MNQ97_06415 PF03313 Serine dehydratase alpha chain MNQ97_06420 PF01053 Cys/Met metabolism PLP-dependent enzyme MNQ97_06430 PF01292 Prokaryotic cytochrome b561 MNQ97_06435 PF04264 YceI-like domain MNQ97_06440 PF03553 Na+/H+ antiporter family MNQ97_06445 PF00356 Bacterial regulatory proteins, lacI family MNQ97_06450 PF00367 phosphotransferase system, EIIB MNQ97_06450 PF02378 Phosphotransferase system, EIIC MNQ97_06455 PF00232 Glycosyl hydrolase family 1 MNQ97_06465 PF03551 Transcriptional regulator PadR-like family MNQ97_06500 PF00589 Phage integrase family MNQ97_06500 PF14659 Phage integrase, N-terminal SAM-like domain MNQ97_06500 PF13356 Arm DNA-binding domain MNQ97_06510 PF03831 PhnA domain MNQ97_06510 PF08274 PhnA Zinc-Ribbon MNQ97_06520 PF01226 Formate/nitrite transporter MNQ97_06525 PF00005 ABC transporter MNQ97_06530 PF03379 CcmB protein MNQ97_06535 PF01578 Cytochrome C assembly protein MNQ97_06540 PF04995 Heme exporter protein D (CcmD) MNQ97_06545 PF03100 CcmE MNQ97_06550 PF01578 Cytochrome C assembly protein MNQ97_06550 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MNQ97_06555 PF08534 Redoxin MNQ97_06560 PF03918 Cytochrome C biogenesis protein MNQ97_06565 PF03918 Cytochrome C biogenesis protein MNQ97_06570 PF04333 MlaA lipoprotein MNQ97_06575 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MNQ97_06580 PF04175 Protein of unknown function (DUF406) MNQ97_06585 PF02803 Thiolase, C-terminal domain MNQ97_06585 PF00108 Thiolase, N-terminal domain MNQ97_06590 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MNQ97_06590 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MNQ97_06590 PF00378 Enoyl-CoA hydratase/isomerase MNQ97_06595 PF00300 Histidine phosphatase superfamily (branch 1) MNQ97_06600 PF01713 Smr domain MNQ97_06605 PF05175 Methyltransferase small domain MNQ97_06610 PF01264 Chorismate synthase MNQ97_06615 PF03411 Penicillin-insensitive murein endopeptidase MNQ97_06620 PF01925 Sulfite exporter TauE/SafE MNQ97_06625 PF04315 Elongation factor P hydroxylase MNQ97_06630 PF08891 YfcL protein MNQ97_06635 PF01266 FAD dependent oxidoreductase MNQ97_06635 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MNQ97_06640 PF02801 Beta-ketoacyl synthase, C-terminal domain MNQ97_06640 PF00109 Beta-ketoacyl synthase, N-terminal domain MNQ97_06645 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_06645 PF00072 Response regulator receiver domain MNQ97_06650 PF01177 Asp/Glu/Hydantoin racemase MNQ97_06655 PF00328 Histidine phosphatase superfamily (branch 2) MNQ97_06660 PF03600 Citrate transporter MNQ97_06675 PF02683 Cytochrome C biogenesis protein transmembrane region MNQ97_06675 PF11412 Disulphide bond corrector protein DsbC MNQ97_06685 PF00578 AhpC/TSA family MNQ97_06690 PF00155 Aminotransferase class I and II MNQ97_06710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MNQ97_06710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MNQ97_06710 PF11890 Domain of unknown function (DUF3410) MNQ97_06715 PF02774 Semialdehyde dehydrogenase, dimerisation domain MNQ97_06715 PF01118 Semialdehyde dehydrogenase, NAD binding domain MNQ97_06720 PF01416 tRNA pseudouridine synthase MNQ97_06725 PF09335 SNARE associated Golgi protein MNQ97_06730 PF17848 Acetyl-coA carboxylase zinc finger domain MNQ97_06730 PF01039 Carboxyl transferase domain MNQ97_06735 PF08245 Mur ligase middle domain MNQ97_06735 PF02875 Mur ligase family, glutamate ligase domain MNQ97_06740 PF05036 Sporulation related domain MNQ97_06745 PF02674 Colicin V production protein MNQ97_06750 PF00156 Phosphoribosyl transferase domain MNQ97_06755 PF02441 Flavoprotein MNQ97_06760 PF00497 Bacterial extracellular solute-binding proteins, family 3 MNQ97_06765 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_06770 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_06775 PF00005 ABC transporter MNQ97_06780 PF01370 NAD dependent epimerase/dehydratase family MNQ97_06780 PF08338 Domain of unknown function (DUF1731) MNQ97_06785 PF00563 EAL domain MNQ97_06790 PF12850 Calcineurin-like phosphoesterase superfamily domain MNQ97_06795 PF00293 NUDIX domain MNQ97_06800 PF03611 PTS system sugar-specific permease component MNQ97_06810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MNQ97_06815 PF00356 Bacterial regulatory proteins, lacI family MNQ97_06815 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MNQ97_06820 PF07085 DRTGG domain MNQ97_06820 PF01515 Phosphate acetyl/butaryl transferase MNQ97_06825 PF00871 Acetokinase family MNQ97_06830 PF04217 Protein of unknown function, DUF412 MNQ97_06835 PF03887 YfbU domain MNQ97_06840 PF13419 Haloacid dehalogenase-like hydrolase MNQ97_06845 PF02080 TrkA-C domain MNQ97_06845 PF03600 Citrate transporter MNQ97_06860 PF00155 Aminotransferase class I and II MNQ97_06865 PF03466 LysR substrate binding domain MNQ97_06865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_06870 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MNQ97_06875 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MNQ97_06880 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MNQ97_06880 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MNQ97_06890 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MNQ97_06890 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MNQ97_06890 PF10531 SLBB domain MNQ97_06895 PF01568 Molydopterin dinucleotide binding domain MNQ97_06895 PF00384 Molybdopterin oxidoreductase MNQ97_06895 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MNQ97_06895 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MNQ97_06900 PF00146 NADH dehydrogenase MNQ97_06905 PF12838 4Fe-4S dicluster domain MNQ97_06910 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MNQ97_06915 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MNQ97_06920 PF00361 Proton-conducting membrane transporter MNQ97_06920 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MNQ97_06925 PF00361 Proton-conducting membrane transporter MNQ97_06930 PF00361 Proton-conducting membrane transporter MNQ97_06940 PF06496 Protein of unknown function (DUF1097) MNQ97_06950 PF01202 Shikimate kinase MNQ97_06955 PF00106 short chain dehydrogenase MNQ97_06960 PF00356 Bacterial regulatory proteins, lacI family MNQ97_06965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MNQ97_06965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MNQ97_06970 PF07690 Major Facilitator Superfamily MNQ97_06975 PF03928 Haem-degrading MNQ97_06980 PF00920 Dehydratase family MNQ97_06985 PF05957 Bacterial protein of unknown function (DUF883) MNQ97_06990 PF00425 chorismate binding enzyme MNQ97_06995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MNQ97_06995 PF16582 Middle domain of thiamine pyrophosphate MNQ97_06995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MNQ97_07000 PF12697 Alpha/beta hydrolase family MNQ97_07005 PF00378 Enoyl-CoA hydratase/isomerase MNQ97_07010 PF13378 Enolase C-terminal domain-like MNQ97_07015 PF13193 AMP-binding enzyme C-terminal domain MNQ97_07015 PF00501 AMP-binding enzyme MNQ97_07030 PF06628 Catalase-related immune-responsive MNQ97_07030 PF00199 Catalase MNQ97_07035 PF07437 YfaZ precursor MNQ97_07040 PF03222 Tryptophan/tyrosine permease family MNQ97_07045 PF00994 Probable molybdopterin binding domain MNQ97_07065 PF00082 Subtilase family MNQ97_07070 PF03974 Ecotin MNQ97_07075 PF00111 2Fe-2S iron-sulfur cluster binding domain MNQ97_07080 PF00268 Ribonucleotide reductase, small chain MNQ97_07085 PF02867 Ribonucleotide reductase, barrel domain MNQ97_07085 PF00317 Ribonucleotide reductase, all-alpha domain MNQ97_07085 PF03477 ATP cone domain MNQ97_07095 PF00521 DNA gyrase/topoisomerase IV, subunit A MNQ97_07095 PF03989 DNA gyrase C-terminal domain, beta-propeller MNQ97_07100 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_07100 PF09456 RcsC Alpha-Beta-Loop (ABL) MNQ97_07100 PF00072 Response regulator receiver domain MNQ97_07100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_07105 PF00072 Response regulator receiver domain MNQ97_07105 PF00196 Bacterial regulatory proteins, luxR family MNQ97_07110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_07110 PF01627 Hpt domain MNQ97_07110 PF16359 RcsD-ABL domain MNQ97_07115 PF07690 Major Facilitator Superfamily MNQ97_07120 PF00267 Gram-negative porin MNQ97_07135 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A MNQ97_07155 PF04002 RadC-like JAB domain MNQ97_07160 PF03230 Antirestriction protein MNQ97_07165 PF06067 Domain of unknown function (DUF932) MNQ97_07215 PF17871 AAA lid domain MNQ97_07215 PF10431 C-terminal, D2-small domain, of ClpB protein MNQ97_07215 PF07724 AAA domain (Cdc48 subfamily) MNQ97_07215 PF00004 ATPase family associated with various cellular activities (AAA) MNQ97_07225 PF05947 Type VI secretion system, TssF MNQ97_07245 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath MNQ97_07250 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 MNQ97_07260 PF06761 Intracellular multiplication and human macrophage-killing MNQ97_07260 PF14331 ImcF-related N-terminal domain MNQ97_07260 PF06744 Type VI secretion protein IcmF C-terminal MNQ97_07265 PF13677 Membrane MotB of proton-channel complex MotA/MotB MNQ97_07265 PF00691 OmpA family MNQ97_07270 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE MNQ97_07300 PF06715 Gp5 C-terminal repeat (3 copies) MNQ97_07300 PF04717 Type VI secretion system, phage-baseplate injector MNQ97_07325 PF03472 Autoinducer binding domain MNQ97_07325 PF00196 Bacterial regulatory proteins, luxR family MNQ97_07335 PF03466 LysR substrate binding domain MNQ97_07335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_07345 PF09134 Invasin, domain 3 MNQ97_07345 PF11924 Inverse autotransporter, beta-domain MNQ97_07345 PF02369 Bacterial Ig-like domain (group 1) MNQ97_07370 PF00230 Major intrinsic protein MNQ97_07375 PF00589 Phage integrase family MNQ97_07395 PF02796 Helix-turn-helix domain of resolvase MNQ97_07395 PF00239 Resolvase, N terminal domain MNQ97_07425 PF00419 Fimbrial protein MNQ97_07430 PF13953 PapC C-terminal domain MNQ97_07430 PF13954 PapC N-terminal domain MNQ97_07430 PF00577 Outer membrane usher protein MNQ97_07435 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_07435 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_07445 PF00419 Fimbrial protein MNQ97_07460 PF05666 Fels-1 Prophage Protein-like MNQ97_07495 PF01548 Transposase MNQ97_07495 PF02371 Transposase IS116/IS110/IS902 family MNQ97_07525 PF13148 Protein of unknown function (DUF3987) MNQ97_07530 PF05930 Prophage CP4-57 regulatory protein (AlpA) MNQ97_07540 PF13276 HTH-like domain MNQ97_07540 PF00665 Integrase core domain MNQ97_07540 PF13333 Integrase core domain MNQ97_07545 PF01527 Transposase MNQ97_07550 PF00589 Phage integrase family MNQ97_07550 PF13356 Arm DNA-binding domain MNQ97_07570 PF00375 Sodium:dicarboxylate symporter family MNQ97_07585 PF07476 Methylaspartate ammonia-lyase C-terminus MNQ97_07585 PF05034 Methylaspartate ammonia-lyase N-terminus MNQ97_07590 PF06368 Methylaspartate mutase E chain (MutE) MNQ97_07595 PF13941 MutL protein MNQ97_07600 PF02310 B12 binding domain MNQ97_07605 PF00288 GHMP kinases N terminal domain MNQ97_07610 PF10414 Sirohaem synthase dimerisation region MNQ97_07610 PF14824 Sirohaem biosynthesis protein central MNQ97_07610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MNQ97_07615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_07615 PF03466 LysR substrate binding domain MNQ97_07620 PF05683 Fumarase C-terminus MNQ97_07620 PF05681 Fumarate hydratase (Fumerase) MNQ97_07625 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP MNQ97_07635 PF00144 Beta-lactamase MNQ97_07645 PF12706 Beta-lactamase superfamily domain MNQ97_07650 PF02743 Cache domain MNQ97_07650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MNQ97_07650 PF00672 HAMP domain MNQ97_07655 PF01278 Omptin family MNQ97_07660 PF06183 DinI-like family MNQ97_07675 PF01418 Helix-turn-helix domain, rpiR family MNQ97_07675 PF01380 SIS domain MNQ97_07680 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MNQ97_07680 PF00367 phosphotransferase system, EIIB MNQ97_07680 PF02378 Phosphotransferase system, EIIC MNQ97_07685 PF00232 Glycosyl hydrolase family 1 MNQ97_07690 PF00194 Eukaryotic-type carbonic anhydrase MNQ97_07720 PF11893 Domain of unknown function (DUF3413) MNQ97_07720 PF00884 Sulfatase MNQ97_07725 PF07208 Protein of unknown function (DUF1414) MNQ97_07730 PF04245 37-kD nucleoid-associated bacterial protein MNQ97_07735 PF01386 Ribosomal L25p family MNQ97_07740 PF00271 Helicase conserved C-terminal domain MNQ97_07740 PF04851 Type III restriction enzyme, res subunit MNQ97_07745 PF00849 RNA pseudouridylate synthase MNQ97_07745 PF01479 S4 domain MNQ97_07750 PF07690 Major Facilitator Superfamily MNQ97_07760 PF13989 YejG-like protein MNQ97_07765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MNQ97_07765 PF00005 ABC transporter MNQ97_07770 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_07770 PF12911 N-terminal TM domain of oligopeptide transport permease C MNQ97_07775 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_07780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MNQ97_07785 PF00563 EAL domain MNQ97_07785 PF12792 CSS motif domain associated with EAL MNQ97_07790 PF00877 NlpC/P60 family MNQ97_07795 PF01569 PAP2 superfamily MNQ97_07800 PF02492 CobW/HypB/UreG, nucleotide-binding domain MNQ97_07800 PF07683 Cobalamin synthesis protein cobW C-terminal domain MNQ97_07810 PF07729 FCD domain MNQ97_07810 PF00392 Bacterial regulatory proteins, gntR family MNQ97_07815 PF01232 Mannitol dehydrogenase Rossmann domain MNQ97_07815 PF08125 Mannitol dehydrogenase C-terminal domain MNQ97_07820 PF03786 D-mannonate dehydratase (UxuA) MNQ97_07825 PF01132 Elongation factor P (EF-P) OB domain MNQ97_07825 PF08207 Elongation factor P (EF-P) KOW-like domain MNQ97_07825 PF09285 Elongation factor P, C-terminal MNQ97_07830 PF03222 Tryptophan/tyrosine permease family MNQ97_07835 PF03692 Putative zinc- or iron-chelating domain MNQ97_07845 PF01116 Fructose-bisphosphate aldolase class-II MNQ97_07850 PF01380 SIS domain MNQ97_07855 PF01979 Amidohydrolase family MNQ97_07860 PF03610 PTS system fructose IIA component MNQ97_07865 PF03613 PTS system mannose/fructose/sorbose family IID component MNQ97_07870 PF03609 PTS system sorbose-specific iic component MNQ97_07875 PF03830 PTS system sorbose subfamily IIB component MNQ97_07880 PF08013 Tagatose 6 phosphate kinase MNQ97_07885 PF00455 DeoR C terminal sensor domain MNQ97_07885 PF08220 DeoR-like helix-turn-helix domain MNQ97_07890 PF00384 Molybdopterin oxidoreductase MNQ97_07890 PF18364 Molybdopterin oxidoreductase N-terminal domain MNQ97_07890 PF01568 Molydopterin dinucleotide binding domain MNQ97_07895 PF03264 NapC/NirT cytochrome c family, N-terminal region MNQ97_07900 PF00293 NUDIX domain MNQ97_07900 PF13344 Haloacid dehalogenase-like hydrolase MNQ97_07905 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MNQ97_07905 PF00381 PTS HPr component phosphorylation site MNQ97_07910 PF00294 pfkB family carbohydrate kinase MNQ97_07915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MNQ97_07915 PF02378 Phosphotransferase system, EIIC MNQ97_07920 PF01261 Xylose isomerase-like TIM barrel MNQ97_07925 PF03601 Conserved hypothetical protein 698 MNQ97_07935 PF03466 LysR substrate binding domain MNQ97_07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_07940 PF00324 Amino acid permease MNQ97_07945 PF00593 TonB dependent receptor MNQ97_07945 PF07715 TonB-dependent Receptor Plug Domain MNQ97_07950 PF00043 Glutathione S-transferase, C-terminal domain MNQ97_07950 PF13417 Glutathione S-transferase, N-terminal domain MNQ97_07965 PF03180 NLPA lipoprotein MNQ97_07970 PF00005 ABC transporter MNQ97_07970 PF09383 NIL domain MNQ97_07975 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_07980 PF01053 Cys/Met metabolism PLP-dependent enzyme MNQ97_07985 PF00571 CBS domain MNQ97_07985 PF00291 Pyridoxal-phosphate dependent enzyme MNQ97_07990 PF07943 Penicillin-binding protein 5, C-terminal domain MNQ97_07990 PF00768 D-alanyl-D-alanine carboxypeptidase MNQ97_07995 PF03313 Serine dehydratase alpha chain MNQ97_07995 PF03315 Serine dehydratase beta chain MNQ97_08005 PF00455 DeoR C terminal sensor domain MNQ97_08005 PF08220 DeoR-like helix-turn-helix domain MNQ97_08010 PF01791 DeoC/LacD family aldolase MNQ97_08015 PF01569 PAP2 superfamily MNQ97_08025 PF06826 Predicted Permease Membrane Region MNQ97_08025 PF02080 TrkA-C domain MNQ97_08030 PF00462 Glutaredoxin MNQ97_08035 PF07214 Protein of unknown function (DUF1418) MNQ97_08040 PF10722 Putative bacterial sensory transduction regulator MNQ97_08045 PF13416 Bacterial extracellular solute-binding protein MNQ97_08050 PF00005 ABC transporter MNQ97_08050 PF08402 TOBE domain MNQ97_08055 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_08060 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_08065 PF10767 Protein of unknown function (DUF2593) MNQ97_08070 PF05958 tRNA (Uracil-5-)-methyltransferase MNQ97_08075 PF00497 Bacterial extracellular solute-binding proteins, family 3 MNQ97_08080 PF00753 Metallo-beta-lactamase superfamily MNQ97_08085 PF00465 Iron-containing alcohol dehydrogenase MNQ97_08090 PF00171 Aldehyde dehydrogenase family MNQ97_08095 PF01614 Bacterial transcriptional regulator MNQ97_08095 PF09339 IclR helix-turn-helix domain MNQ97_08100 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_08105 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_08110 PF00497 Bacterial extracellular solute-binding proteins, family 3 MNQ97_08115 PF00005 ABC transporter MNQ97_08120 PF12883 Protein of unknown function (DUF3828) MNQ97_08125 PF01370 NAD dependent epimerase/dehydratase family MNQ97_08130 PF11066 Protein of unknown function (DUF2867) MNQ97_08130 PF13460 NAD(P)H-binding MNQ97_08135 PF01212 Beta-eliminating lyase MNQ97_08145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MNQ97_08145 PF00205 Thiamine pyrophosphate enzyme, central domain MNQ97_08145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MNQ97_08150 PF00175 Oxidoreductase NAD-binding domain MNQ97_08150 PF00970 Oxidoreductase FAD-binding domain MNQ97_08150 PF00111 2Fe-2S iron-sulfur cluster binding domain MNQ97_08155 PF03063 Prismane/CO dehydrogenase family MNQ97_08160 PF03956 Lysine exporter LysO MNQ97_08165 PF11398 Protein of unknown function (DUF2813) MNQ97_08170 PF04393 Protein of unknown function (DUF535) MNQ97_08175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MNQ97_08180 PF02687 FtsX-like permease family MNQ97_08180 PF12704 MacB-like periplasmic core domain MNQ97_08180 PF00005 ABC transporter MNQ97_08185 PF00313 'Cold-shock' DNA-binding domain MNQ97_08190 PF02617 ATP-dependent Clp protease adaptor protein ClpS MNQ97_08195 PF00004 ATPase family associated with various cellular activities (AAA) MNQ97_08195 PF10431 C-terminal, D2-small domain, of ClpB protein MNQ97_08195 PF07724 AAA domain (Cdc48 subfamily) MNQ97_08195 PF17871 AAA lid domain MNQ97_08195 PF02861 Clp amino terminal domain, pathogenicity island component MNQ97_08200 PF01176 Translation initiation factor 1A / IF-1 MNQ97_08205 PF03588 Leucyl/phenylalanyl-tRNA protein transferase MNQ97_08210 PF00664 ABC transporter transmembrane region MNQ97_08210 PF00005 ABC transporter MNQ97_08215 PF00664 ABC transporter transmembrane region MNQ97_08215 PF00005 ABC transporter MNQ97_08220 PF07992 Pyridine nucleotide-disulphide oxidoreductase MNQ97_08225 PF01037 Lrp/AsnC ligand binding domain MNQ97_08230 PF09397 Ftsk gamma domain MNQ97_08230 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MNQ97_08230 PF01580 FtsK/SpoIIIE family MNQ97_08230 PF17854 FtsK alpha domain MNQ97_08235 PF03548 Outer membrane lipoprotein carrier protein LolA MNQ97_08240 PF00004 ATPase family associated with various cellular activities (AAA) MNQ97_08240 PF12002 MgsA AAA+ ATPase C terminal MNQ97_08240 PF16193 AAA C-terminal domain MNQ97_08245 PF02403 Seryl-tRNA synthetase N-terminal domain MNQ97_08245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MNQ97_08250 PF07690 Major Facilitator Superfamily MNQ97_08255 PF04055 Radical SAM superfamily MNQ97_08260 PF02901 Pyruvate formate lyase-like MNQ97_08260 PF01228 Glycine radical MNQ97_08265 PF01226 Formate/nitrite transporter MNQ97_08270 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding MNQ97_08270 PF18381 YcaO cyclodehydratase C-terminal domain MNQ97_08275 PF00710 Asparaginase, N-terminal MNQ97_08275 PF17763 Glutaminase/Asparaginase C-terminal domain MNQ97_08280 PF00266 Aminotransferase class-V MNQ97_08285 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MNQ97_08290 PF02224 Cytidylate kinase MNQ97_08295 PF00575 S1 RNA binding domain MNQ97_08300 PF00216 Bacterial DNA-binding protein MNQ97_08305 PF00753 Metallo-beta-lactamase superfamily MNQ97_08305 PF03772 Competence protein MNQ97_08310 PF00664 ABC transporter transmembrane region MNQ97_08310 PF00005 ABC transporter MNQ97_08315 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MNQ97_08320 PF07063 Domain of unknown function (DUF1338) MNQ97_08325 PF00313 'Cold-shock' DNA-binding domain MNQ97_08330 PF00313 'Cold-shock' DNA-binding domain MNQ97_08335 PF03966 Trm112p-like protein MNQ97_08340 PF02348 Cytidylyltransferase MNQ97_08345 PF01636 Phosphotransferase enzyme family MNQ97_08350 PF02698 DUF218 domain MNQ97_08355 PF13847 Methyltransferase domain MNQ97_08360 PF03882 MukF winged-helix domain MNQ97_08360 PF17193 MukF C-terminal domain MNQ97_08360 PF17192 MukF middle domain MNQ97_08365 PF04288 MukE-like family MNQ97_08370 PF04310 MukB N-terminal MNQ97_08370 PF16330 MukB hinge domain MNQ97_08375 PF03734 L,D-transpeptidase catalytic domain MNQ97_08375 PF01471 Putative peptidoglycan binding domain MNQ97_08380 PF05951 Bacterial protein of unknown function (DUF882) MNQ97_08385 PF00753 Metallo-beta-lactamase superfamily MNQ97_08390 PF12792 CSS motif domain associated with EAL MNQ97_08390 PF00563 EAL domain MNQ97_08395 PF00155 Aminotransferase class I and II MNQ97_08400 PF00267 Gram-negative porin MNQ97_08405 PF00152 tRNA synthetases class II (D, K and N) MNQ97_08405 PF01336 OB-fold nucleic acid binding domain MNQ97_08410 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain MNQ97_08410 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family MNQ97_08415 PF01433 Peptidase family M1 domain MNQ97_08415 PF17432 Domain of unknown function (DUF3458_C) ARM repeats MNQ97_08415 PF11940 Domain of unknown function (DUF3458) Ig-like fold MNQ97_08420 PF01180 Dihydroorotate dehydrogenase MNQ97_08425 PF07126 Cell-division protein ZapC MNQ97_08430 PF00111 2Fe-2S iron-sulfur cluster binding domain MNQ97_08430 PF03473 MOSC domain MNQ97_08430 PF03476 MOSC N-terminal beta barrel domain MNQ97_08435 PF01170 Putative RNA methylase family UPF0020 MNQ97_08435 PF10672 S-adenosylmethionine-dependent methyltransferase MNQ97_08435 PF02926 THUMP domain MNQ97_08440 PF00005 ABC transporter MNQ97_08440 PF12848 ABC transporter MNQ97_08440 PF16326 ABC transporter C-terminal domain MNQ97_08445 PF04403 Paraquat-inducible protein A MNQ97_08450 PF02470 MlaD protein MNQ97_08455 PF03886 ABC-type transport auxiliary lipoprotein component MNQ97_08460 PF04957 Ribosome modulation factor MNQ97_08465 PF00109 Beta-ketoacyl synthase, N-terminal domain MNQ97_08465 PF02801 Beta-ketoacyl synthase, C-terminal domain MNQ97_08470 PF01638 HxlR-like helix-turn-helix MNQ97_08475 PF07977 FabA-like domain MNQ97_08480 PF13654 AAA domain MNQ97_08480 PF05362 Lon protease (S16) C-terminal proteolytic domain MNQ97_08485 PF06303 MatP N-terminal domain MNQ97_08485 PF17414 MatP C-terminal ribbon-helix-helix domain MNQ97_08490 PF00691 OmpA family MNQ97_08490 PF01389 OmpA-like transmembrane domain MNQ97_08495 PF03846 Cell division inhibitor SulA MNQ97_08500 PF04994 TfoX C-terminal domain MNQ97_08500 PF04993 TfoX N-terminal domain MNQ97_08505 PF12805 FUSC-like inner membrane protein yccS MNQ97_08510 PF03733 Inner membrane component domain MNQ97_08515 PF13361 UvrD-like helicase C-terminal domain MNQ97_08515 PF12462 DNA helicase IV / RNA helicase N terminal MNQ97_08515 PF00580 UvrD/REP helicase N-terminal domain MNQ97_08520 PF02142 MGS-like domain MNQ97_08525 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) MNQ97_08530 PF13380 CoA binding domain MNQ97_08535 PF08755 Hemimethylated DNA-binding protein YccV like MNQ97_08540 PF10672 S-adenosylmethionine-dependent methyltransferase MNQ97_08540 PF17785 PUA-like domain MNQ97_08545 PF00708 Acylphosphatase MNQ97_08550 PF04358 DsrC like protein MNQ97_08575 PF00563 EAL domain MNQ97_08575 PF12792 CSS motif domain associated with EAL MNQ97_08580 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_08580 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_08590 PF00577 Outer membrane usher protein MNQ97_08590 PF13954 PapC N-terminal domain MNQ97_08590 PF13953 PapC C-terminal domain MNQ97_08595 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_08595 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_08625 PF00343 Carbohydrate phosphorylase MNQ97_08635 PF00486 Transcriptional regulatory protein, C terminal MNQ97_08635 PF00072 Response regulator receiver domain MNQ97_08645 PF00483 Nucleotidyl transferase MNQ97_08655 PF00535 Glycosyl transferase family 2 MNQ97_08655 PF03552 Cellulose synthase MNQ97_08655 PF07238 PilZ domain MNQ97_08675 PF16355 Domain of unknown function (DUF4982) MNQ97_08675 PF00703 Glycosyl hydrolases family 2 MNQ97_08675 PF02837 Glycosyl hydrolases family 2, sugar binding domain MNQ97_08675 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MNQ97_08680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MNQ97_08680 PF00672 HAMP domain MNQ97_08680 PF01627 Hpt domain MNQ97_08680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_08680 PF00072 Response regulator receiver domain MNQ97_08680 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_08685 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_08685 PF00072 Response regulator receiver domain MNQ97_08690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_08690 PF03466 LysR substrate binding domain MNQ97_08695 PF04115 Ureidoglycolate lyase MNQ97_08700 PF09339 IclR helix-turn-helix domain MNQ97_08700 PF01614 Bacterial transcriptional regulator MNQ97_08705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MNQ97_08705 PF00205 Thiamine pyrophosphate enzyme, central domain MNQ97_08705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MNQ97_08710 PF01261 Xylose isomerase-like TIM barrel MNQ97_08715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MNQ97_08715 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MNQ97_08720 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin MNQ97_08725 PF01979 Amidohydrolase family MNQ97_08730 PF00860 Permease family MNQ97_08735 PF02595 Glycerate kinase family MNQ97_08740 PF07883 Cupin domain MNQ97_08740 PF05899 Protein of unknown function (DUF861) MNQ97_08745 PF01546 Peptidase family M20/M25/M40 MNQ97_08750 PF02615 Malate/L-lactate dehydrogenase MNQ97_08755 PF00549 CoA-ligase MNQ97_08755 PF02629 CoA binding domain MNQ97_08760 PF06545 Protein of unknown function (DUF1116) MNQ97_08765 PF11392 Protein of unknown function (DUF2877) MNQ97_08770 PF00696 Amino acid kinase family MNQ97_08780 PF13953 PapC C-terminal domain MNQ97_08780 PF13954 PapC N-terminal domain MNQ97_08780 PF00577 Outer membrane usher protein MNQ97_08795 PF11924 Inverse autotransporter, beta-domain MNQ97_08795 PF09134 Invasin, domain 3 MNQ97_08795 PF02369 Bacterial Ig-like domain (group 1) MNQ97_08815 PF00282 Pyridoxal-dependent decarboxylase conserved domain MNQ97_08820 PF13520 Amino acid permease MNQ97_08825 PF04960 Glutaminase MNQ97_08830 PF00196 Bacterial regulatory proteins, luxR family MNQ97_08830 PF03472 Autoinducer binding domain MNQ97_08835 PF00765 Autoinducer synthase MNQ97_08850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_08850 PF03466 LysR substrate binding domain MNQ97_08855 PF02080 TrkA-C domain MNQ97_08855 PF03471 Transporter associated domain MNQ97_08855 PF00999 Sodium/hydrogen exchanger family MNQ97_08865 PF01757 Acyltransferase family MNQ97_08870 PF04349 Periplasmic glucan biosynthesis protein, MdoG MNQ97_08875 PF00535 Glycosyl transferase family 2 MNQ97_08880 PF07119 Protein of unknown function (DUF1375) MNQ97_08895 PF00854 POT family MNQ97_08900 PF07690 Major Facilitator Superfamily MNQ97_08905 PF07681 DoxX MNQ97_08910 PF03279 Bacterial lipid A biosynthesis acyltransferase MNQ97_08915 PF00072 Response regulator receiver domain MNQ97_08915 PF00196 Bacterial regulatory proteins, luxR family MNQ97_08920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_08920 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_08925 PF13247 4Fe-4S dicluster domain MNQ97_08930 PF03916 Polysulphide reductase, NrfD MNQ97_08935 PF01568 Molydopterin dinucleotide binding domain MNQ97_08935 PF00384 Molybdopterin oxidoreductase MNQ97_08935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MNQ97_08945 PF00581 Rhodanese-like domain MNQ97_08945 PF12368 Rhodanase C-terminal MNQ97_08945 PF17773 UPF0176 acylphosphatase like domain MNQ97_08950 PF01594 AI-2E family transporter MNQ97_08960 PF00196 Bacterial regulatory proteins, luxR family MNQ97_08965 PF01266 FAD dependent oxidoreductase MNQ97_08970 PF13991 BssS protein family MNQ97_08975 PF06183 DinI-like family MNQ97_08980 PF01979 Amidohydrolase family MNQ97_08985 PF03992 Antibiotic biosynthesis monooxygenase MNQ97_08990 PF12111 Polyribonucleotide phosphorylase C terminal MNQ97_08990 PF10150 Ribonuclease E/G family MNQ97_08990 PF00575 S1 RNA binding domain MNQ97_08995 PF00849 RNA pseudouridylate synthase MNQ97_08995 PF01479 S4 domain MNQ97_09000 PF02545 Maf-like protein MNQ97_09005 PF02620 Large ribosomal RNA subunit accumulation protein YceD MNQ97_09010 PF01783 Ribosomal L32p protein family MNQ97_09015 PF02504 Fatty acid synthesis protein MNQ97_09020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MNQ97_09020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MNQ97_09025 PF00698 Acyl transferase domain MNQ97_09035 PF00550 Phosphopantetheine attachment site MNQ97_09040 PF00109 Beta-ketoacyl synthase, N-terminal domain MNQ97_09040 PF02801 Beta-ketoacyl synthase, C-terminal domain MNQ97_09045 PF01063 Amino-transferase class IV MNQ97_09050 PF02618 YceG-like family MNQ97_09055 PF02223 Thymidylate kinase MNQ97_09060 PF09115 DNA polymerase III, delta subunit, C terminal MNQ97_09065 PF01026 TatD related DNase MNQ97_09070 PF02378 Phosphotransferase system, EIIC MNQ97_09070 PF00367 phosphotransferase system, EIIB MNQ97_09080 PF01230 HIT domain MNQ97_09085 PF07233 Protein of unknown function (DUF1425) MNQ97_09090 PF13036 Peptidoglycan-synthase activator LpoB MNQ97_09090 PF08139 Prokaryotic membrane lipoprotein lipid attachment site MNQ97_09095 PF01636 Phosphotransferase enzyme family MNQ97_09100 PF00933 Glycosyl hydrolase family 3 N terminal domain MNQ97_09105 PF05728 Uncharacterised protein family (UPF0227) MNQ97_09110 PF07992 Pyridine nucleotide-disulphide oxidoreductase MNQ97_09115 PF05433 Glycine zipper 2TM domain MNQ97_09120 PF02559 CarD-like/TRCF domain MNQ97_09120 PF00270 DEAD/DEAH box helicase MNQ97_09120 PF00271 Helicase conserved C-terminal domain MNQ97_09120 PF03461 TRCF domain MNQ97_09120 PF17757 UvrB interaction domain MNQ97_09125 PF02687 FtsX-like permease family MNQ97_09125 PF12704 MacB-like periplasmic core domain MNQ97_09130 PF00005 ABC transporter MNQ97_09135 PF02687 FtsX-like permease family MNQ97_09135 PF12704 MacB-like periplasmic core domain MNQ97_09140 PF00480 ROK family MNQ97_09145 PF02146 Sir2 family MNQ97_09150 PF07687 Peptidase dimerisation domain MNQ97_09150 PF01546 Peptidase family M20/M25/M40 MNQ97_09155 PF08007 Cupin superfamily protein MNQ97_09160 PF08918 PhoQ Sensor MNQ97_09160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_09165 PF00072 Response regulator receiver domain MNQ97_09165 PF00486 Transcriptional regulatory protein, C terminal MNQ97_09175 PF08328 Adenylosuccinate lyase C-terminal MNQ97_09175 PF00206 Lyase MNQ97_09180 PF04356 Protein of unknown function (DUF489) MNQ97_09190 PF00293 NUDIX domain MNQ97_09195 PF00849 RNA pseudouridylate synthase MNQ97_09200 PF00180 Isocitrate/isopropylmalate dehydrogenase MNQ97_09205 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain MNQ97_09205 PF00589 Phage integrase family MNQ97_09255 PF10065 Uncharacterized conserved protein (DUF2303) MNQ97_09270 PF01381 Helix-turn-helix MNQ97_09270 PF00717 Peptidase S24-like MNQ97_09295 PF05869 DNA N-6-adenine-methyltransferase (Dam) MNQ97_09300 PF05866 Endodeoxyribonuclease RusA MNQ97_09305 PF09669 Phage regulatory protein Rha (Phage_pRha) MNQ97_09305 PF03374 Phage antirepressor protein KilAC domain MNQ97_09310 PF06147 Protein of unknown function (DUF968) MNQ97_09315 PF06530 Phage antitermination protein Q MNQ97_09360 PF06440 DNA polymerase III, theta subunit MNQ97_09385 PF00574 Clp protease MNQ97_09455 PF00132 Bacterial transferase hexapeptide (six repeats) MNQ97_09485 PF18416 N-acetylglucosamine binding protein domain 2 MNQ97_09485 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading MNQ97_09495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MNQ97_09495 PF08447 PAS fold MNQ97_09505 PF13438 Domain of unknown function (DUF4113) MNQ97_09505 PF00817 impB/mucB/samB family MNQ97_09505 PF11799 impB/mucB/samB family C-terminal domain MNQ97_09510 PF00717 Peptidase S24-like MNQ97_09515 PF01053 Cys/Met metabolism PLP-dependent enzyme MNQ97_09520 PF05368 NmrA-like family MNQ97_09525 PF01638 HxlR-like helix-turn-helix MNQ97_09540 PF00892 EamA-like transporter family MNQ97_09550 PF07007 Lysozyme inhibitor LprI MNQ97_09555 PF06411 HdeA/HdeB family MNQ97_09560 PF00360 Phytochrome region MNQ97_09560 PF01590 GAF domain MNQ97_09560 PF00563 EAL domain MNQ97_09560 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_09570 PF00664 ABC transporter transmembrane region MNQ97_09570 PF00005 ABC transporter MNQ97_09580 PF13520 Amino acid permease MNQ97_09590 PF12833 Helix-turn-helix domain MNQ97_09595 PF10964 Protein of unknown function (DUF2766) MNQ97_09600 PF13996 YobH-like protein MNQ97_09605 PF13998 MgrB protein MNQ97_09610 PF13974 YebO-like protein MNQ97_09625 PF00324 Amino acid permease MNQ97_09630 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP MNQ97_09635 PF10736 Protein of unknown function (DUF2627) MNQ97_09640 PF00313 'Cold-shock' DNA-binding domain MNQ97_09645 PF02578 Multi-copper polyphenol oxidoreductase laccase MNQ97_09650 PF03717 Penicillin-binding Protein dimerisation domain MNQ97_09650 PF00905 Penicillin binding protein transpeptidase domain MNQ97_09655 PF13847 Methyltransferase domain MNQ97_09665 PF13426 PAS domain MNQ97_09665 PF08448 PAS fold MNQ97_09665 PF08447 PAS fold MNQ97_09665 PF05231 MASE1 MNQ97_09665 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_09665 PF00563 EAL domain MNQ97_09670 PF00593 TonB dependent receptor MNQ97_09670 PF07715 TonB-dependent Receptor Plug Domain MNQ97_09675 PF02659 Putative manganese efflux pump MNQ97_09680 PF06173 Protein of unknown function (DUF986) MNQ97_09685 PF03613 PTS system mannose/fructose/sorbose family IID component MNQ97_09690 PF03609 PTS system sorbose-specific iic component MNQ97_09695 PF03610 PTS system fructose IIA component MNQ97_09695 PF03830 PTS system sorbose subfamily IIB component MNQ97_09700 PF03471 Transporter associated domain MNQ97_09700 PF03741 Integral membrane protein TerC family MNQ97_09705 PF03313 Serine dehydratase alpha chain MNQ97_09705 PF03315 Serine dehydratase beta chain MNQ97_09710 PF00293 NUDIX domain MNQ97_09715 PF00425 chorismate binding enzyme MNQ97_09715 PF04715 Anthranilate synthase component I, N terminal region MNQ97_09720 PF03701 Uncharacterised protein family (UPF0181) MNQ97_09725 PF02222 ATP-grasp domain MNQ97_09730 PF00271 Helicase conserved C-terminal domain MNQ97_09730 PF00270 DEAD/DEAH box helicase MNQ97_09730 PF03880 DbpA RNA binding domain MNQ97_09735 PF07130 YebG protein MNQ97_09740 PF04266 ASCH domain MNQ97_09745 PF13995 YebF-like protein MNQ97_09750 PF00326 Prolyl oligopeptidase family MNQ97_09750 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MNQ97_09755 PF00929 Exonuclease MNQ97_09760 PF00561 alpha/beta hydrolase fold MNQ97_09765 PF06440 DNA polymerase III, theta subunit MNQ97_09770 PF00210 Ferritin-like domain MNQ97_09775 PF04234 CopC domain MNQ97_09780 PF05425 Copper resistance protein D MNQ97_09785 PF10709 Protein of unknown function (DUF2511) MNQ97_09895 PF01381 Helix-turn-helix MNQ97_09895 PF00717 Peptidase S24-like MNQ97_09935 PF09397 Ftsk gamma domain MNQ97_09935 PF01580 FtsK/SpoIIIE family MNQ97_09935 PF17854 FtsK alpha domain MNQ97_09935 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MNQ97_09945 PF05869 DNA N-6-adenine-methyltransferase (Dam) MNQ97_09985 PF00959 Phage lysozyme MNQ97_10100 PF10549 ORF11CD3 domain MNQ97_10100 PF09669 Phage regulatory protein Rha (Phage_pRha) MNQ97_10145 PF00291 Pyridoxal-phosphate dependent enzyme MNQ97_10150 PF04073 Aminoacyl-tRNA editing domain MNQ97_10155 PF02423 Ornithine cyclodeaminase/mu-crystallin family MNQ97_10200 PF12792 CSS motif domain associated with EAL MNQ97_10200 PF00563 EAL domain MNQ97_10215 PF00582 Universal stress protein family MNQ97_10225 PF10753 Toxin GhoT_OrtT MNQ97_10230 PF00924 Mechanosensitive ion channel MNQ97_10235 PF00849 RNA pseudouridylate synthase MNQ97_10235 PF01479 S4 domain MNQ97_10245 PF00892 EamA-like transporter family MNQ97_10265 PF14834 Glutathione S-transferase, C-terminal domain MNQ97_10265 PF02798 Glutathione S-transferase, N-terminal domain MNQ97_10300 PF07351 Protein of unknown function (DUF1480) MNQ97_10305 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_10305 PF00360 Phytochrome region MNQ97_10305 PF00563 EAL domain MNQ97_10305 PF01590 GAF domain MNQ97_10310 PF07690 Major Facilitator Superfamily MNQ97_10315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_10315 PF03466 LysR substrate binding domain MNQ97_10320 PF02470 MlaD protein MNQ97_10325 PF04403 Paraquat-inducible protein A MNQ97_10330 PF13185 GAF domain MNQ97_10335 PF04352 ProQ/FINO family MNQ97_10335 PF17516 ProQ C-terminal domain MNQ97_10340 PF00595 PDZ domain MNQ97_10340 PF11818 C-terminal domain of tail specific protease (DUF3340) MNQ97_10340 PF03572 Peptidase family S41 MNQ97_10340 PF17804 Tail specific protease N-terminal domain MNQ97_10345 PF01435 Peptidase family M48 MNQ97_10350 PF07690 Major Facilitator Superfamily MNQ97_10355 PF14583 Oligogalacturonate lyase MNQ97_10360 PF01614 Bacterial transcriptional regulator MNQ97_10360 PF09339 IclR helix-turn-helix domain MNQ97_10365 PF01510 N-acetylmuramoyl-L-alanine amidase MNQ97_10370 PF00375 Sodium:dicarboxylate symporter family MNQ97_10375 PF04307 LexA-binding, inner membrane-associated putative hydrolase MNQ97_10380 PF06178 Oligogalacturonate-specific porin protein (KdgM) MNQ97_10390 PF03459 TOBE domain MNQ97_10390 PF17912 MalK OB fold domain MNQ97_10390 PF00005 ABC transporter MNQ97_10395 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_10400 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_10405 PF06917 Periplasmic pectate lyase MNQ97_10415 PF04962 KduI/IolB family MNQ97_10420 PF07883 Cupin domain MNQ97_10425 PF13419 Haloacid dehalogenase-like hydrolase MNQ97_10430 PF14002 YniB-like protein MNQ97_10435 PF03466 LysR substrate binding domain MNQ97_10435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_10440 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain MNQ97_10440 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain MNQ97_10445 PF00378 Enoyl-CoA hydratase/isomerase MNQ97_10455 PF02310 B12 binding domain MNQ97_10455 PF01642 Methylmalonyl-CoA mutase MNQ97_10460 PF03881 Fructosamine kinase MNQ97_10465 PF00950 ABC 3 transport family MNQ97_10470 PF00950 ABC 3 transport family MNQ97_10475 PF00005 ABC transporter MNQ97_10480 PF01297 Zinc-uptake complex component A periplasmic MNQ97_10485 PF01464 Transglycosylase SLT domain MNQ97_10490 PF01914 MarC family integral membrane protein MNQ97_10510 PF01261 Xylose isomerase-like TIM barrel MNQ97_10515 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MNQ97_10520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MNQ97_10520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MNQ97_10525 PF02615 Malate/L-lactate dehydrogenase MNQ97_10540 PF02653 Branched-chain amino acid transport system / permease component MNQ97_10545 PF00005 ABC transporter MNQ97_10550 PF09339 IclR helix-turn-helix domain MNQ97_10550 PF01614 Bacterial transcriptional regulator MNQ97_10555 PF04474 Protein of unknown function (DUF554) MNQ97_10560 PF13619 KTSC domain MNQ97_10565 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MNQ97_10565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MNQ97_10565 PF02824 TGS domain MNQ97_10565 PF03129 Anticodon binding domain MNQ97_10570 PF00707 Translation initiation factor IF-3, C-terminal domain MNQ97_10570 PF05198 Translation initiation factor IF-3, N-terminal domain MNQ97_10575 PF01632 Ribosomal protein L35 MNQ97_10580 PF00453 Ribosomal protein L20 MNQ97_10585 PF01409 tRNA synthetases class II core domain (F) MNQ97_10585 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MNQ97_10590 PF03484 tRNA synthetase B5 domain MNQ97_10590 PF03147 Ferredoxin-fold anticodon binding domain MNQ97_10590 PF01588 Putative tRNA binding domain MNQ97_10590 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MNQ97_10590 PF03483 B3/4 domain MNQ97_10595 PF00216 Bacterial DNA-binding protein MNQ97_10610 PF01032 FecCD transport family MNQ97_10615 PF00255 Glutathione peroxidase MNQ97_10620 PF00005 ABC transporter MNQ97_10625 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MNQ97_10630 PF00535 Glycosyl transferase family 2 MNQ97_10635 PF00551 Formyl transferase MNQ97_10635 PF02911 Formyl transferase, C-terminal domain MNQ97_10635 PF01370 NAD dependent epimerase/dehydratase family MNQ97_10640 PF01522 Polysaccharide deacetylase MNQ97_10645 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase MNQ97_10650 PF00892 EamA-like transporter family MNQ97_10660 PF00877 NlpC/P60 family MNQ97_10665 PF10437 Bacterial lipoate protein ligase C-terminus MNQ97_10665 PF03099 Biotin/lipoate A/B protein ligase family MNQ97_10670 PF02696 Uncharacterized ACR, YdiU/UPF0061 family MNQ97_10675 PF01497 Periplasmic binding protein MNQ97_10680 PF05171 Haemin-degrading HemS.ChuX domain MNQ97_10685 PF07715 TonB-dependent Receptor Plug Domain MNQ97_10685 PF00593 TonB dependent receptor MNQ97_10690 PF10636 Hemin uptake protein hemP MNQ97_10695 PF00793 DAHP synthetase I family MNQ97_10700 PF03618 Kinase/pyrophosphorylase MNQ97_10705 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MNQ97_10705 PF00391 PEP-utilising enzyme, mobile domain MNQ97_10705 PF02896 PEP-utilising enzyme, TIM barrel domain MNQ97_10715 PF01594 AI-2E family transporter MNQ97_10720 PF02913 FAD linked oxidases, C-terminal domain MNQ97_10720 PF13183 4Fe-4S dicluster domain MNQ97_10720 PF01565 FAD binding domain MNQ97_10725 PF03061 Thioesterase superfamily MNQ97_10730 PF01521 Iron-sulphur cluster biosynthesis MNQ97_10735 PF01458 Uncharacterized protein family (UPF0051) MNQ97_10740 PF00005 ABC transporter MNQ97_10745 PF01458 Uncharacterized protein family (UPF0051) MNQ97_10750 PF00266 Aminotransferase class-V MNQ97_10755 PF02657 Fe-S metabolism associated domain MNQ97_10760 PF01476 LysM domain MNQ97_10760 PF03734 L,D-transpeptidase catalytic domain MNQ97_10760 PF17969 L,D-transpeptidase C-terminal domain MNQ97_10765 PF04728 Lipoprotein leucine-zipper MNQ97_10770 PF02887 Pyruvate kinase, alpha/beta domain MNQ97_10770 PF00224 Pyruvate kinase, barrel domain MNQ97_10795 PF01554 MatE MNQ97_10800 PF00677 Lumazine binding domain MNQ97_10810 PF07690 Major Facilitator Superfamily MNQ97_10815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_10815 PF03466 LysR substrate binding domain MNQ97_10820 PF00356 Bacterial regulatory proteins, lacI family MNQ97_10830 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MNQ97_10830 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MNQ97_10835 PF00877 NlpC/P60 family MNQ97_10840 PF00462 Glutaredoxin MNQ97_10845 PF00929 Exonuclease MNQ97_10850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MNQ97_10855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MNQ97_10860 PF16925 Tetracyclin repressor-like, C-terminal domain MNQ97_10860 PF00440 Bacterial regulatory proteins, tetR family MNQ97_10865 PF08019 Phosphoethanolamine transferase EptA/EptB MNQ97_10865 PF00884 Sulfatase MNQ97_10870 PF06945 Protein of unknown function (DUF1289) MNQ97_10875 PF00248 Aldo/keto reductase family MNQ97_10880 PF04632 Fusaric acid resistance protein family MNQ97_10885 PF00529 HlyD membrane-fusion protein of T1SS MNQ97_10885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MNQ97_10890 PF07869 Protein of unknown function (DUF1656) MNQ97_10895 PF01047 MarR family MNQ97_10900 PF05433 Glycine zipper 2TM domain MNQ97_10905 PF03702 Anhydro-N-acetylmuramic acid kinase MNQ97_10910 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme MNQ97_10915 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MNQ97_10915 PF01243 Pyridoxamine 5'-phosphate oxidase MNQ97_10920 PF00579 tRNA synthetases class I (W and Y) MNQ97_10920 PF01479 S4 domain MNQ97_10925 PF08543 Phosphomethylpyrimidine kinase MNQ97_10930 PF00043 Glutathione S-transferase, C-terminal domain MNQ97_10930 PF02798 Glutathione S-transferase, N-terminal domain MNQ97_10935 PF11656 YjbD family (DUF3811) MNQ97_10940 PF04893 Yip1 domain MNQ97_10950 PF00854 POT family MNQ97_10955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_10955 PF03466 LysR substrate binding domain MNQ97_10965 PF00005 ABC transporter MNQ97_10970 PF00005 ABC transporter MNQ97_10970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MNQ97_10975 PF12911 N-terminal TM domain of oligopeptide transport permease C MNQ97_10975 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_10980 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_10985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MNQ97_11000 PF02954 Bacterial regulatory protein, Fis family MNQ97_11000 PF00158 Sigma-54 interaction domain MNQ97_11005 PF04012 PspA/IM30 family MNQ97_11010 PF06667 Phage shock protein B MNQ97_11015 PF04024 PspC domain MNQ97_11025 PF04317 YcjX-like family, DUF463 MNQ97_11030 PF05128 Domain of unknown function (DUF697) MNQ97_11035 PF08808 RES domain MNQ97_11040 PF09722 Protein of unknown function (DUF2384) MNQ97_11045 PF18024 Helix-turn-helix domain MNQ97_11045 PF00158 Sigma-54 interaction domain MNQ97_11050 PF08534 Redoxin MNQ97_11055 PF13378 Enolase C-terminal domain-like MNQ97_11055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MNQ97_11060 PF00246 Zinc carboxypeptidase MNQ97_11065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MNQ97_11070 PF01544 CorA-like Mg2+ transporter protein MNQ97_11075 PF01171 PP-loop family MNQ97_11080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MNQ97_11080 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MNQ97_11080 PF10371 Domain of unknown function MNQ97_11080 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MNQ97_11080 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MNQ97_11085 PF00893 Small Multidrug Resistance protein MNQ97_11090 PF02308 MgtC family MNQ97_11095 PF03891 Domain of unknown function (DUF333) MNQ97_11100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MNQ97_11100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MNQ97_11105 PF11739 Dicarboxylate transport MNQ97_11110 PF13617 YnbE-like lipoprotein MNQ97_11115 PF07027 Protein of unknown function (DUF1318) MNQ97_11120 PF07690 Major Facilitator Superfamily MNQ97_11125 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MNQ97_11125 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MNQ97_11130 PF01232 Mannitol dehydrogenase Rossmann domain MNQ97_11130 PF08125 Mannitol dehydrogenase C-terminal domain MNQ97_11135 PF04198 Putative sugar-binding domain MNQ97_11140 PF02525 Flavodoxin-like fold MNQ97_11145 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MNQ97_11145 PF00270 DEAD/DEAH box helicase MNQ97_11145 PF11898 Domain of unknown function (DUF3418) MNQ97_11145 PF04408 Helicase associated domain (HA2) MNQ97_11145 PF00271 Helicase conserved C-terminal domain MNQ97_11160 PF00089 Trypsin MNQ97_11180 PF02074 Carboxypeptidase Taq (M32) metallopeptidase MNQ97_11185 PF00672 HAMP domain MNQ97_11185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_11185 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_11190 PF00072 Response regulator receiver domain MNQ97_11190 PF00486 Transcriptional regulatory protein, C terminal MNQ97_11200 PF13520 Amino acid permease MNQ97_11205 PF07338 Protein of unknown function (DUF1471) MNQ97_11210 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MNQ97_11210 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MNQ97_11210 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch MNQ97_11215 PF02233 NAD(P) transhydrogenase beta subunit MNQ97_11220 PF00582 Universal stress protein family MNQ97_11225 PF00027 Cyclic nucleotide-binding domain MNQ97_11225 PF13545 Crp-like helix-turn-helix domain MNQ97_11230 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MNQ97_11230 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MNQ97_11245 PF06445 GyrI-like small molecule binding domain MNQ97_11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_11250 PF03466 LysR substrate binding domain MNQ97_11260 PF00245 Alkaline phosphatase MNQ97_11265 PF00294 pfkB family carbohydrate kinase MNQ97_11270 PF07690 Major Facilitator Superfamily MNQ97_11285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_11285 PF03466 LysR substrate binding domain MNQ97_11295 PF13419 Haloacid dehalogenase-like hydrolase MNQ97_11300 PF01042 Endoribonuclease L-PSP MNQ97_11305 PF01842 ACT domain MNQ97_11310 PF00205 Thiamine pyrophosphate enzyme, central domain MNQ97_11310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MNQ97_11310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MNQ97_11340 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus MNQ97_11340 PF01048 Phosphorylase superfamily MNQ97_11345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_11345 PF03466 LysR substrate binding domain MNQ97_11350 PF05958 tRNA (Uracil-5-)-methyltransferase MNQ97_11355 PF02424 ApbE family MNQ97_11365 PF00497 Bacterial extracellular solute-binding proteins, family 3 MNQ97_11370 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_11375 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_11380 PF01037 Lrp/AsnC ligand binding domain MNQ97_11390 PF07992 Pyridine nucleotide-disulphide oxidoreductase MNQ97_11390 PF18113 Rubredoxin binding C-terminal domain MNQ97_11395 PF00753 Metallo-beta-lactamase superfamily MNQ97_11395 PF00301 Rubredoxin MNQ97_11395 PF00258 Flavodoxin MNQ97_11400 PF00158 Sigma-54 interaction domain MNQ97_11400 PF01590 GAF domain MNQ97_11405 PF02798 Glutathione S-transferase, N-terminal domain MNQ97_11415 PF01022 Bacterial regulatory protein, arsR family MNQ97_11420 PF06953 Arsenical resistance operon trans-acting repressor ArsD MNQ97_11425 PF02374 Anion-transporting ATPase MNQ97_11430 PF02040 Arsenical pump membrane protein MNQ97_11435 PF03960 ArsC family MNQ97_11450 PF00155 Aminotransferase class I and II MNQ97_11450 PF00392 Bacterial regulatory proteins, gntR family MNQ97_11455 PF02638 Glycosyl hydrolase-like 10 MNQ97_11460 PF01527 Transposase MNQ97_11465 PF13276 HTH-like domain MNQ97_11465 PF13333 Integrase core domain MNQ97_11465 PF00665 Integrase core domain MNQ97_11470 PF00132 Bacterial transferase hexapeptide (six repeats) MNQ97_11475 PF00106 short chain dehydrogenase MNQ97_11480 PF02694 Uncharacterised BCR, YnfA/UPF0060 family MNQ97_11485 PF06932 Protein of unknown function (DUF1283) MNQ97_11490 PF06649 Protein of unknown function (DUF1161) MNQ97_11495 PF00654 Voltage gated chloride channel MNQ97_11505 PF00480 ROK family MNQ97_11510 PF03466 LysR substrate binding domain MNQ97_11510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_11515 PF07690 Major Facilitator Superfamily MNQ97_11530 PF00583 Acetyltransferase (GNAT) family MNQ97_11535 PF05472 DNA replication terminus site-binding protein (Ter protein) MNQ97_11540 PF10415 Fumarase C C-terminus MNQ97_11540 PF00206 Lyase MNQ97_11545 PF01238 Phosphomannose isomerase type I MNQ97_11550 PF06097 Bacterial protein of unknown function (DUF945) MNQ97_11555 PF00132 Bacterial transferase hexapeptide (six repeats) MNQ97_11560 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MNQ97_11560 PF00356 Bacterial regulatory proteins, lacI family MNQ97_11565 PF02378 Phosphotransferase system, EIIC MNQ97_11565 PF00367 phosphotransferase system, EIIB MNQ97_11570 PF00155 Aminotransferase class I and II MNQ97_11575 PF00392 Bacterial regulatory proteins, gntR family MNQ97_11575 PF07702 UTRA domain MNQ97_11580 PF13378 Enolase C-terminal domain-like MNQ97_11580 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MNQ97_11585 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MNQ97_11585 PF00367 phosphotransferase system, EIIB MNQ97_11585 PF02378 Phosphotransferase system, EIIC MNQ97_11590 PF00962 Adenosine/AMP deaminase MNQ97_11595 PF13593 SBF-like CPA transporter family (DUF4137) MNQ97_11600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MNQ97_11600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MNQ97_11605 PF02311 AraC-like ligand binding domain MNQ97_11605 PF12833 Helix-turn-helix domain MNQ97_11610 PF02653 Branched-chain amino acid transport system / permease component MNQ97_11615 PF00005 ABC transporter MNQ97_11620 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MNQ97_11625 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MNQ97_11630 PF02610 L-arabinose isomerase MNQ97_11630 PF11762 L-arabinose isomerase C-terminal domain MNQ97_11635 PF02463 RecF/RecN/SMC N terminal domain MNQ97_11640 PF00232 Glycosyl hydrolase family 1 MNQ97_11645 PF00005 ABC transporter MNQ97_11645 PF03412 Peptidase C39 family MNQ97_11645 PF00664 ABC transporter transmembrane region MNQ97_11655 PF00664 ABC transporter transmembrane region MNQ97_11655 PF00005 ABC transporter MNQ97_11655 PF03412 Peptidase C39 family MNQ97_11660 PF01268 Formate--tetrahydrofolate ligase MNQ97_11665 PF10754 Protein of unknown function (DUF2569) MNQ97_11670 PF02508 Rnf-Nqr subunit, membrane protein MNQ97_11675 PF04060 Putative Fe-S cluster MNQ97_11680 PF13237 4Fe-4S dicluster domain MNQ97_11680 PF13375 RnfC Barrel sandwich hybrid domain MNQ97_11680 PF10531 SLBB domain MNQ97_11680 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MNQ97_11685 PF06445 GyrI-like small molecule binding domain MNQ97_11685 PF12833 Helix-turn-helix domain MNQ97_11690 PF03116 NQR2, RnfD, RnfE family MNQ97_11695 PF04205 FMN-binding domain MNQ97_11700 PF02508 Rnf-Nqr subunit, membrane protein MNQ97_11705 PF00730 HhH-GPD superfamily base excision DNA repair protein MNQ97_11705 PF00633 Helix-hairpin-helix motif MNQ97_11705 PF10576 Iron-sulfur binding domain of endonuclease III MNQ97_11710 PF00384 Molybdopterin oxidoreductase MNQ97_11715 PF00773 RNB domain MNQ97_11715 PF00575 S1 RNA binding domain MNQ97_11715 PF08206 Ribonuclease B OB domain MNQ97_11720 PF13722 5TM C-terminal transporter carbon starvation CstA MNQ97_11720 PF02554 Carbon starvation protein CstA MNQ97_11725 PF04328 Selenoprotein, putative MNQ97_11730 PF00923 Transaldolase/Fructose-6-phosphate aldolase MNQ97_11735 PF00455 DeoR C terminal sensor domain MNQ97_11735 PF08220 DeoR-like helix-turn-helix domain MNQ97_11745 PF00596 Class II Aldolase and Adducin N-terminal domain MNQ97_11750 PF05433 Glycine zipper 2TM domain MNQ97_11755 PF01253 Translation initiation factor SUI1 MNQ97_11760 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MNQ97_11765 PF07338 Protein of unknown function (DUF1471) MNQ97_11775 PF18073 Rubredoxin metal binding domain MNQ97_11780 PF06305 Lipopolysaccharide assembly protein A domain MNQ97_11785 PF01569 PAP2 superfamily MNQ97_11790 PF00925 GTP cyclohydrolase II MNQ97_11795 PF00694 Aconitase C-terminal domain MNQ97_11795 PF00330 Aconitase family (aconitate hydratase) MNQ97_11805 PF03466 LysR substrate binding domain MNQ97_11805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_11810 PF01396 Topoisomerase DNA binding C4 zinc finger MNQ97_11810 PF01751 Toprim domain MNQ97_11810 PF01131 DNA topoisomerase MNQ97_11810 PF08272 Topoisomerase I zinc-ribbon-like MNQ97_11815 PF10692 Protein of unknown function (DUF2498) MNQ97_11820 PF08496 Peptidase family S49 N-terminal MNQ97_11820 PF01343 Peptidase family S49 MNQ97_11825 PF00106 short chain dehydrogenase MNQ97_11830 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP MNQ97_11840 PF01479 S4 domain MNQ97_11840 PF00849 RNA pseudouridylate synthase MNQ97_11850 PF01300 Telomere recombination MNQ97_11855 PF02811 PHP domain MNQ97_11865 PF04715 Anthranilate synthase component I, N terminal region MNQ97_11865 PF00425 chorismate binding enzyme MNQ97_11870 PF00117 Glutamine amidotransferase class-I MNQ97_11875 PF02885 Glycosyl transferase family, helical bundle domain MNQ97_11875 PF00591 Glycosyl transferase family, a/b domain MNQ97_11880 PF00218 Indole-3-glycerol phosphate synthase MNQ97_11880 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MNQ97_11885 PF00291 Pyridoxal-phosphate dependent enzyme MNQ97_11890 PF00290 Tryptophan synthase alpha chain MNQ97_11895 PF04972 BON domain MNQ97_11900 PF03922 OmpW family MNQ97_11905 PF03692 Putative zinc- or iron-chelating domain MNQ97_11920 PF04279 Intracellular septation protein A MNQ97_11925 PF03061 Thioesterase superfamily MNQ97_11930 PF03544 Gram-negative bacterial TonB protein C-terminal MNQ97_11935 PF03795 YCII-related domain MNQ97_11960 PF13396 Phospholipase_D-nuclease N-terminal MNQ97_11960 PF13091 PLD-like domain MNQ97_11965 PF04269 Protein of unknown function, DUF440 MNQ97_11970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MNQ97_11970 PF00005 ABC transporter MNQ97_11975 PF00005 ABC transporter MNQ97_11975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MNQ97_11980 PF12911 N-terminal TM domain of oligopeptide transport permease C MNQ97_11980 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_11985 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_11990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MNQ97_12000 PF01914 MarC family integral membrane protein MNQ97_12005 PF00171 Aldehyde dehydrogenase family MNQ97_12005 PF00465 Iron-containing alcohol dehydrogenase MNQ97_12010 PF00265 Thymidine kinase MNQ97_12015 PF00816 H-NS histone family MNQ97_12020 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MNQ97_12020 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MNQ97_12020 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MNQ97_12025 PF00072 Response regulator receiver domain MNQ97_12030 PF01734 Patatin-like phospholipase MNQ97_12040 PF02810 SEC-C motif MNQ97_12045 PF01842 ACT domain MNQ97_12045 PF00551 Formyl transferase MNQ97_12065 PF03466 LysR substrate binding domain MNQ97_12065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_12070 PF03372 Endonuclease/Exonuclease/phosphatase family MNQ97_12075 PF00293 NUDIX domain MNQ97_12080 PF07383 Protein of unknown function (DUF1496) MNQ97_12085 PF01131 DNA topoisomerase MNQ97_12085 PF01751 Toprim domain MNQ97_12090 PF00586 AIR synthase related protein, N-terminal domain MNQ97_12090 PF02769 AIR synthase related protein, C-terminal domain MNQ97_12095 PF00881 Nitroreductase family MNQ97_12100 PF01343 Peptidase family S49 MNQ97_12105 PF00710 Asparaginase, N-terminal MNQ97_12105 PF17763 Glutaminase/Asparaginase C-terminal domain MNQ97_12110 PF00857 Isochorismatase family MNQ97_12115 PF07023 Protein of unknown function (DUF1315) MNQ97_12120 PF01641 SelR domain MNQ97_12125 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MNQ97_12125 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MNQ97_12130 PF01263 Aldose 1-epimerase MNQ97_12135 PF06629 MltA-interacting protein MipA MNQ97_12140 PF08298 PrkA AAA domain MNQ97_12140 PF06798 PrkA serine protein kinase C-terminal domain MNQ97_12145 PF04285 Protein of unknown function (DUF444) MNQ97_12155 PF00563 EAL domain MNQ97_12155 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_12155 PF13426 PAS domain MNQ97_12160 PF07690 Major Facilitator Superfamily MNQ97_12165 PF00842 Alanine racemase, C-terminal domain MNQ97_12165 PF01168 Alanine racemase, N-terminal domain MNQ97_12170 PF01266 FAD dependent oxidoreductase MNQ97_12175 PF04293 SpoVR like protein MNQ97_12180 PF07840 FadR C-terminal domain MNQ97_12180 PF00392 Bacterial regulatory proteins, gntR family MNQ97_12185 PF06450 Bacterial Na+/H+ antiporter B (NhaB) MNQ97_12190 PF02600 Disulfide bond formation protein DsbB MNQ97_12200 PF13332 Hemagglutinin repeat MNQ97_12200 PF05860 haemagglutination activity domain MNQ97_12205 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB MNQ97_12205 PF08479 POTRA domain, ShlB-type MNQ97_12205 PF17287 POTRA domain MNQ97_12210 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MNQ97_12210 PF00132 Bacterial transferase hexapeptide (six repeats) MNQ97_12240 PF03692 Putative zinc- or iron-chelating domain MNQ97_12245 PF01557 Fumarylacetoacetate (FAA) hydrolase family MNQ97_12250 PF13406 Transglycosylase SLT domain MNQ97_12255 PF05166 YcgL domain MNQ97_12265 PF03775 Septum formation inhibitor MinC, C-terminal domain MNQ97_12265 PF05209 Septum formation inhibitor MinC, N-terminal domain MNQ97_12270 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MNQ97_12275 PF03776 Septum formation topological specificity factor MinE MNQ97_12280 PF01612 3'-5' exonuclease MNQ97_12280 PF00570 HRDC domain MNQ97_12285 PF00501 AMP-binding enzyme MNQ97_12285 PF13193 AMP-binding enzyme C-terminal domain MNQ97_12290 PF03843 Outer membrane lipoprotein Slp family MNQ97_12295 PF00814 Glycoprotease family MNQ97_12300 PF13307 Helicase C-terminal domain MNQ97_12300 PF04851 Type III restriction enzyme, res subunit MNQ97_12305 PF01042 Endoribonuclease L-PSP MNQ97_12310 PF00893 Small Multidrug Resistance protein MNQ97_12315 PF00893 Small Multidrug Resistance protein MNQ97_12320 PF01081 KDPG and KHG aldolase MNQ97_12325 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain MNQ97_12325 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain MNQ97_12330 PF01380 SIS domain MNQ97_12330 PF01418 Helix-turn-helix domain, rpiR family MNQ97_12335 PF00224 Pyruvate kinase, barrel domain MNQ97_12335 PF02887 Pyruvate kinase, alpha/beta domain MNQ97_12340 PF03279 Bacterial lipid A biosynthesis acyltransferase MNQ97_12345 PF01476 LysM domain MNQ97_12345 PF08525 Opacity-associated protein A N-terminal motif MNQ97_12345 PF01551 Peptidase family M23 MNQ97_12350 PF01297 Zinc-uptake complex component A periplasmic MNQ97_12355 PF00005 ABC transporter MNQ97_12360 PF00950 ABC 3 transport family MNQ97_12365 PF00854 POT family MNQ97_12370 PF17864 RuvB AAA lid domain MNQ97_12370 PF05491 RuvB C-terminal winged helix domain MNQ97_12370 PF05496 Holliday junction DNA helicase RuvB P-loop domain MNQ97_12375 PF07499 RuvA, C-terminal domain MNQ97_12375 PF01330 RuvA N terminal domain MNQ97_12380 PF02075 Crossover junction endodeoxyribonuclease RuvC MNQ97_12385 PF01709 Transcriptional regulator MNQ97_12390 PF00293 NUDIX domain MNQ97_12395 PF02938 GAD domain MNQ97_12395 PF00152 tRNA synthetases class II (D, K and N) MNQ97_12395 PF01336 OB-fold nucleic acid binding domain MNQ97_12400 PF00857 Isochorismatase family MNQ97_12405 PF01904 Protein of unknown function DUF72 MNQ97_12410 PF01124 MAPEG family MNQ97_12415 PF13649 Methyltransferase domain MNQ97_12420 PF08003 Protein of unknown function (DUF1698) MNQ97_12425 PF03932 CutC family MNQ97_12430 PF06185 YecM protein MNQ97_12435 PF05746 DALR anticodon binding domain MNQ97_12435 PF03485 Arginyl tRNA synthetase N terminal domain MNQ97_12435 PF00750 tRNA synthetases class I (R) MNQ97_12440 PF03023 Lipid II flippase MurJ MNQ97_12445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MNQ97_12450 PF04337 Protein of unknown function, DUF480 MNQ97_12455 PF13302 Acetyltransferase (GNAT) domain MNQ97_12460 PF07690 Major Facilitator Superfamily MNQ97_12465 PF07273 Protein of unknown function (DUF1439) MNQ97_12470 PF02613 Nitrate reductase delta subunit MNQ97_12475 PF02811 PHP domain MNQ97_12480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MNQ97_12490 PF03009 Glycerophosphoryl diester phosphodiesterase family MNQ97_12500 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_12500 PF07694 5TMR of 5TMR-LYT MNQ97_12505 PF01740 STAS domain MNQ97_12505 PF00916 Sulfate permease family MNQ97_12510 PF00793 DAHP synthetase I family MNQ97_12515 PF13369 Transglutaminase-like superfamily MNQ97_12520 PF04247 Invasion gene expression up-regulator, SirB MNQ97_12525 PF17827 PrmC N-terminal domain MNQ97_12525 PF13847 Methyltransferase domain MNQ97_12530 PF03462 PCRF domain MNQ97_12530 PF00472 RF-1 domain MNQ97_12535 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MNQ97_12535 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MNQ97_12535 PF01488 Shikimate / quinate 5-dehydrogenase MNQ97_12540 PF03550 Outer membrane lipoprotein LolB MNQ97_12545 PF00288 GHMP kinases N terminal domain MNQ97_12545 PF08544 GHMP kinases C terminal MNQ97_12550 PF14572 Phosphoribosyl synthetase-associated domain MNQ97_12550 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MNQ97_12555 PF10762 Protein of unknown function (DUF2583) MNQ97_12560 PF01195 Peptidyl-tRNA hydrolase MNQ97_12570 PF06071 Protein of unknown function (DUF933) MNQ97_12570 PF01926 50S ribosome-binding GTPase MNQ97_12585 PF00392 Bacterial regulatory proteins, gntR family MNQ97_12585 PF07702 UTRA domain MNQ97_12590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MNQ97_12595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MNQ97_12595 PF02378 Phosphotransferase system, EIIC MNQ97_12600 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit MNQ97_12605 PF11975 Family 4 glycosyl hydrolase C-terminal domain MNQ97_12605 PF02056 Family 4 glycosyl hydrolase MNQ97_12610 PF01476 LysM domain MNQ97_12610 PF01551 Peptidase family M23 MNQ97_12620 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment MNQ97_12625 PF17926 Tetracyclin repressor-like, C-terminal domain MNQ97_12625 PF00440 Bacterial regulatory proteins, tetR family MNQ97_12635 PF07690 Major Facilitator Superfamily MNQ97_12650 PF02653 Branched-chain amino acid transport system / permease component MNQ97_12655 PF00005 ABC transporter MNQ97_12660 PF13407 Periplasmic binding protein domain MNQ97_12675 PF00392 Bacterial regulatory proteins, gntR family MNQ97_12675 PF07702 UTRA domain MNQ97_12680 PF01979 Amidohydrolase family MNQ97_12690 PF00267 Gram-negative porin MNQ97_12695 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family MNQ97_12700 PF04996 Succinylarginine dihydrolase MNQ97_12705 PF00171 Aldehyde dehydrogenase family MNQ97_12710 PF04958 Arginine N-succinyltransferase beta subunit MNQ97_12715 PF00202 Aminotransferase class-III MNQ97_12720 PF00155 Aminotransferase class I and II MNQ97_12720 PF00392 Bacterial regulatory proteins, gntR family MNQ97_12725 PF01654 Cytochrome bd terminal oxidase subunit I MNQ97_12730 PF02322 Cytochrome bd terminal oxidase subunit II MNQ97_12740 PF00672 HAMP domain MNQ97_12740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_12740 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term MNQ97_12740 PF07730 Histidine kinase MNQ97_12745 PF03466 LysR substrate binding domain MNQ97_12745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_12750 PF07690 Major Facilitator Superfamily MNQ97_12760 PF01699 Sodium/calcium exchanger protein MNQ97_12765 PF02562 PhoH-like protein MNQ97_12775 PF13994 PgaD-like protein MNQ97_12780 PF00535 Glycosyl transferase family 2 MNQ97_12785 PF14883 Hypothetical glycosyl hydrolase family 13 MNQ97_12785 PF01522 Polysaccharide deacetylase MNQ97_12795 PF01321 Creatinase/Prolidase N-terminal domain MNQ97_12795 PF00557 Metallopeptidase family M24 MNQ97_12800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MNQ97_12800 PF02272 DHHA1 domain MNQ97_12800 PF01411 tRNA synthetases class II (A) MNQ97_12805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_12805 PF03466 LysR substrate binding domain MNQ97_12810 PF09313 Domain of unknown function (DUF1971) MNQ97_12810 PF03848 Tellurite resistance protein TehB MNQ97_12820 PF00578 AhpC/TSA family MNQ97_12825 PF02687 FtsX-like permease family MNQ97_12825 PF12704 MacB-like periplasmic core domain MNQ97_12825 PF00005 ABC transporter MNQ97_12835 PF00005 ABC transporter MNQ97_12835 PF02687 FtsX-like permease family MNQ97_12835 PF12704 MacB-like periplasmic core domain MNQ97_12845 PF10634 Fe2+ transport protein MNQ97_12850 PF03239 Iron permease FTR1 family MNQ97_12860 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit MNQ97_12865 PF00232 Glycosyl hydrolase family 1 MNQ97_12870 PF02378 Phosphotransferase system, EIIC MNQ97_12875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MNQ97_12880 PF00356 Bacterial regulatory proteins, lacI family MNQ97_12895 PF04960 Glutaminase MNQ97_12900 PF02447 GntP family permease MNQ97_12905 PF01261 Xylose isomerase-like TIM barrel MNQ97_12910 PF00596 Class II Aldolase and Adducin N-terminal domain MNQ97_12915 PF17042 Nucleotide-binding C-terminal domain MNQ97_12915 PF07005 Sugar-binding N-terminal domain MNQ97_12920 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MNQ97_12920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MNQ97_12925 PF08220 DeoR-like helix-turn-helix domain MNQ97_12925 PF00455 DeoR C terminal sensor domain MNQ97_12930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_12930 PF00989 PAS fold MNQ97_12930 PF17203 Single cache domain 3 MNQ97_12930 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MNQ97_12935 PF00072 Response regulator receiver domain MNQ97_12940 PF03390 2-hydroxycarboxylate transporter family MNQ97_12945 PF00324 Amino acid permease MNQ97_12950 PF02665 Nitrate reductase gamma subunit MNQ97_12955 PF02613 Nitrate reductase delta subunit MNQ97_12960 PF14711 Respiratory nitrate reductase beta C-terminal MNQ97_12960 PF13247 4Fe-4S dicluster domain MNQ97_12965 PF00384 Molybdopterin oxidoreductase MNQ97_12965 PF01568 Molydopterin dinucleotide binding domain MNQ97_12965 PF14710 Respiratory nitrate reductase alpha N-terminal MNQ97_12970 PF07690 Major Facilitator Superfamily MNQ97_12975 PF00196 Bacterial regulatory proteins, luxR family MNQ97_12975 PF00072 Response regulator receiver domain MNQ97_12980 PF04343 Protein of unknown function, DUF488 MNQ97_12990 PF07690 Major Facilitator Superfamily MNQ97_13000 PF00155 Aminotransferase class I and II MNQ97_13015 PF00196 Bacterial regulatory proteins, luxR family MNQ97_13020 PF00419 Fimbrial protein MNQ97_13030 PF13954 PapC N-terminal domain MNQ97_13030 PF00577 Outer membrane usher protein MNQ97_13030 PF13953 PapC C-terminal domain MNQ97_13035 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_13035 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_13070 PF01757 Acyltransferase family MNQ97_13100 PF03466 LysR substrate binding domain MNQ97_13100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_13115 PF00753 Metallo-beta-lactamase superfamily MNQ97_13150 PF02899 Phage integrase, N-terminal SAM-like domain MNQ97_13150 PF00589 Phage integrase family MNQ97_13165 PF06892 Phage regulatory protein CII (CP76) MNQ97_13185 PF05840 Bacteriophage replication gene A protein (GPA) MNQ97_13360 PF04606 Ogr/Delta-like zinc finger MNQ97_13380 PF01066 CDP-alcohol phosphatidyltransferase MNQ97_13385 PF02151 UvrB/uvrC motif MNQ97_13385 PF08459 UvrC Helix-hairpin-helix N-terminal MNQ97_13385 PF01541 GIY-YIG catalytic domain MNQ97_13390 PF00196 Bacterial regulatory proteins, luxR family MNQ97_13390 PF00072 Response regulator receiver domain MNQ97_13395 PF10769 Protein of unknown function (DUF2594) MNQ97_13400 PF06942 GlpM protein MNQ97_13410 PF00672 HAMP domain MNQ97_13410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MNQ97_13410 PF02203 Tar ligand binding domain homologue MNQ97_13415 PF00128 Alpha amylase, catalytic domain MNQ97_13415 PF02806 Alpha amylase, C-terminal all-beta domain MNQ97_13440 PF13185 GAF domain MNQ97_13440 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_13450 PF00324 Amino acid permease MNQ97_13460 PF01161 Phosphatidylethanolamine-binding protein MNQ97_13470 PF03358 NADPH-dependent FMN reductase MNQ97_13475 PF04261 Dyp-type peroxidase family MNQ97_13480 PF13473 Cupredoxin-like domain MNQ97_13480 PF09375 Imelysin MNQ97_13485 PF03239 Iron permease FTR1 family MNQ97_13490 PF00474 Sodium:solute symporter family MNQ97_13495 PF00171 Aldehyde dehydrogenase family MNQ97_13495 PF01619 Proline dehydrogenase MNQ97_13495 PF14850 DNA-binding domain of Proline dehydrogenase MNQ97_13495 PF18327 Proline utilization A proline dehydrogenase N-terminal domain MNQ97_13510 PF00005 ABC transporter MNQ97_13515 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_13520 PF00497 Bacterial extracellular solute-binding proteins, family 3 MNQ97_13525 PF00291 Pyridoxal-phosphate dependent enzyme MNQ97_13530 PF02899 Phage integrase, N-terminal SAM-like domain MNQ97_13535 PF04542 Sigma-70 region 2 MNQ97_13535 PF04539 Sigma-70 region 3 MNQ97_13535 PF04545 Sigma-70, region 4 MNQ97_13540 PF00700 Bacterial flagellin C-terminal helical region MNQ97_13540 PF00669 Bacterial flagellin N-terminal helical region MNQ97_13545 PF07196 Flagellin hook IN motif MNQ97_13545 PF07195 Flagellar hook-associated protein 2 C-terminus MNQ97_13545 PF02465 Flagellar hook-associated protein 2 N-terminus MNQ97_13550 PF02561 Flagellar protein FliS MNQ97_13555 PF05400 Flagellar protein FliT MNQ97_13560 PF12833 Helix-turn-helix domain MNQ97_13565 PF01966 HD domain MNQ97_13570 PF00730 HhH-GPD superfamily base excision DNA repair protein MNQ97_13575 PF02049 Flagellar hook-basal body complex protein FliE MNQ97_13580 PF08345 Flagellar M-ring protein C-terminal MNQ97_13580 PF01514 Secretory protein of YscJ/FliF family MNQ97_13585 PF01706 FliG C-terminal domain MNQ97_13585 PF14841 FliG middle domain MNQ97_13585 PF14842 FliG N-terminal domain MNQ97_13590 PF02108 Flagellar assembly protein FliH MNQ97_13595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MNQ97_13595 PF18269 T3SS EscN ATPase C-terminal domain MNQ97_13600 PF02050 Flagellar FliJ protein MNQ97_13605 PF02120 Flagellar hook-length control protein FliK MNQ97_13610 PF03748 Flagellar basal body-associated protein FliL MNQ97_13615 PF02154 Flagellar motor switch protein FliM MNQ97_13615 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MNQ97_13620 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MNQ97_13620 PF16973 Flagellar motor switch protein FliN N-terminal MNQ97_13625 PF04347 Flagellar biosynthesis protein, FliO MNQ97_13630 PF00813 FliP family MNQ97_13635 PF01313 Bacterial export proteins, family 3 MNQ97_13640 PF01311 Bacterial export proteins, family 1 MNQ97_13645 PF00669 Bacterial flagellin N-terminal helical region MNQ97_13650 PF00460 Flagella basal body rod protein MNQ97_13650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MNQ97_13655 PF10135 Rod binding protein MNQ97_13655 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MNQ97_13660 PF02119 Flagellar P-ring protein MNQ97_13665 PF02107 Flagellar L-ring protein MNQ97_13670 PF00460 Flagella basal body rod protein MNQ97_13670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MNQ97_13675 PF00460 Flagella basal body rod protein MNQ97_13675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MNQ97_13680 PF07559 Flagellar basal body protein FlaE MNQ97_13680 PF00460 Flagella basal body rod protein MNQ97_13680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MNQ97_13685 PF03963 Flagellar hook capping protein - N-terminal region MNQ97_13685 PF13860 FlgD Ig-like domain MNQ97_13685 PF13861 FlgD Tudor-like domain MNQ97_13690 PF00460 Flagella basal body rod protein MNQ97_13690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MNQ97_13695 PF00460 Flagella basal body rod protein MNQ97_13700 PF13144 Chaperone for flagella basal body P-ring formation MNQ97_13700 PF17656 FlgA N-terminal domain MNQ97_13705 PF04316 Anti-sigma-28 factor, FlgM MNQ97_13710 PF05130 FlgN protein MNQ97_13720 PF06366 Flagellar protein FlhE MNQ97_13725 PF00771 FHIPEP family MNQ97_13730 PF01312 FlhB HrpN YscU SpaS Family MNQ97_13735 PF04344 Chemotaxis phosphatase, CheZ MNQ97_13740 PF00072 Response regulator receiver domain MNQ97_13745 PF01339 CheB methylesterase MNQ97_13745 PF00072 Response regulator receiver domain MNQ97_13750 PF01739 CheR methyltransferase, SAM binding domain MNQ97_13750 PF03705 CheR methyltransferase, all-alpha domain MNQ97_13755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MNQ97_13755 PF02203 Tar ligand binding domain homologue MNQ97_13755 PF00672 HAMP domain MNQ97_13760 PF00672 HAMP domain MNQ97_13760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MNQ97_13760 PF02203 Tar ligand binding domain homologue MNQ97_13765 PF01584 CheW-like domain MNQ97_13770 PF01584 CheW-like domain MNQ97_13770 PF09078 CheY binding MNQ97_13770 PF02895 Signal transducing histidine kinase, homodimeric domain MNQ97_13770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_13770 PF01627 Hpt domain MNQ97_13775 PF00691 OmpA family MNQ97_13775 PF13677 Membrane MotB of proton-channel complex MotA/MotB MNQ97_13780 PF01618 MotA/TolQ/ExbB proton channel family MNQ97_13785 PF05280 Flagellar transcriptional activator (FlhC) MNQ97_13790 PF05247 Flagellar transcriptional activator (FlhD) MNQ97_13795 PF00582 Universal stress protein family MNQ97_13800 PF00107 Zinc-binding dehydrogenase MNQ97_13800 PF16884 N-terminal domain of oxidoreductase MNQ97_13805 PF00690 Cation transporter/ATPase, N-terminus MNQ97_13805 PF00689 Cation transporting ATPase, C-terminus MNQ97_13810 PF02308 MgtC family MNQ97_13815 PF02203 Tar ligand binding domain homologue MNQ97_13815 PF00672 HAMP domain MNQ97_13815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MNQ97_13820 PF10781 Dextransucrase DSRB MNQ97_13825 PF00313 'Cold-shock' DNA-binding domain MNQ97_13830 PF00356 Bacterial regulatory proteins, lacI family MNQ97_13835 PF02929 Beta galactosidase small chain MNQ97_13835 PF02837 Glycosyl hydrolases family 2, sugar binding domain MNQ97_13835 PF16353 Domain of unknown function(DUF4981) MNQ97_13835 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MNQ97_13835 PF00703 Glycosyl hydrolases family 2 MNQ97_13840 PF00698 Acyl transferase domain MNQ97_13840 PF14765 Polyketide synthase dehydratase MNQ97_13840 PF00550 Phosphopantetheine attachment site MNQ97_13840 PF08659 KR domain MNQ97_13840 PF00109 Beta-ketoacyl synthase, N-terminal domain MNQ97_13840 PF16197 Ketoacyl-synthetase C-terminal extension MNQ97_13840 PF02801 Beta-ketoacyl synthase, C-terminal domain MNQ97_13840 PF00107 Zinc-binding dehydrogenase MNQ97_13840 PF08240 Alcohol dehydrogenase GroES-like domain MNQ97_13845 PF10777 Inner membrane protein YlaC MNQ97_13850 PF01037 Lrp/AsnC ligand binding domain MNQ97_13860 PF14001 YdfZ protein MNQ97_13865 PF00328 Histidine phosphatase superfamily (branch 2) MNQ97_13870 PF00483 Nucleotidyl transferase MNQ97_13875 PF06178 Oligogalacturonate-specific porin protein (KdgM) MNQ97_13890 PF01055 Glycosyl hydrolases family 31 MNQ97_13900 PF01263 Aldose 1-epimerase MNQ97_13905 PF01116 Fructose-bisphosphate aldolase class-II MNQ97_13910 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MNQ97_13910 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MNQ97_13915 PF00294 pfkB family carbohydrate kinase MNQ97_13920 PF00455 DeoR C terminal sensor domain MNQ97_13920 PF08220 DeoR-like helix-turn-helix domain MNQ97_13935 PF13953 PapC C-terminal domain MNQ97_13935 PF00577 Outer membrane usher protein MNQ97_13935 PF13954 PapC N-terminal domain MNQ97_13940 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_13940 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_13945 PF00419 Fimbrial protein MNQ97_13960 PF06167 Glucose-regulated metallo-peptidase M90 MNQ97_13990 PF13801 Heavy-metal resistance MNQ97_13995 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_13995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_14000 PF00158 Sigma-54 interaction domain MNQ97_14000 PF00072 Response regulator receiver domain MNQ97_14000 PF02954 Bacterial regulatory protein, Fis family MNQ97_14005 PF00356 Bacterial regulatory proteins, lacI family MNQ97_14020 PF00381 PTS HPr component phosphorylation site MNQ97_14020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MNQ97_14025 PF00083 Sugar (and other) transporter MNQ97_14030 PF17837 4'-phosphopantetheinyl transferase N-terminal domain MNQ97_14030 PF01648 4'-phosphopantetheinyl transferase superfamily MNQ97_14035 PF03480 Bacterial extracellular solute-binding protein, family 7 MNQ97_14045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MNQ97_14050 PF00939 Sodium:sulfate symporter transmembrane region MNQ97_14055 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase MNQ97_14060 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase MNQ97_14065 PF04223 Citrate lyase, alpha subunit (CitF) MNQ97_14070 PF03328 HpcH/HpaI aldolase/citrate lyase family MNQ97_14075 PF06857 Malonate decarboxylase delta subunit (MdcD) MNQ97_14080 PF08218 Citrate lyase ligase C-terminal domain MNQ97_14085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_14085 PF00989 PAS fold MNQ97_14085 PF17203 Single cache domain 3 MNQ97_14085 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MNQ97_14090 PF00072 Response regulator receiver domain MNQ97_14090 PF12431 Transcriptional regulator MNQ97_14095 PF00072 Response regulator receiver domain MNQ97_14095 PF00196 Bacterial regulatory proteins, luxR family MNQ97_14100 PF05231 MASE1 MNQ97_14100 PF07730 Histidine kinase MNQ97_14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_14105 PF07690 Major Facilitator Superfamily MNQ97_14115 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_14120 PF00005 ABC transporter MNQ97_14120 PF08402 TOBE domain MNQ97_14130 PF00196 Bacterial regulatory proteins, luxR family MNQ97_14130 PF00072 Response regulator receiver domain MNQ97_14135 PF00989 PAS fold MNQ97_14135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_14135 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_14135 PF01627 Hpt domain MNQ97_14135 PF00497 Bacterial extracellular solute-binding proteins, family 3 MNQ97_14135 PF00072 Response regulator receiver domain MNQ97_14145 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_14145 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_14150 PF00577 Outer membrane usher protein MNQ97_14150 PF13954 PapC N-terminal domain MNQ97_14150 PF13953 PapC C-terminal domain MNQ97_14160 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_14160 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_14205 PF13296 Putative type VI secretion system Rhs element Vgr MNQ97_14205 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) MNQ97_14205 PF04717 Type VI secretion system, phage-baseplate injector MNQ97_14245 PF07007 Lysozyme inhibitor LprI MNQ97_14270 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) MNQ97_14270 PF04717 Type VI secretion system, phage-baseplate injector MNQ97_14270 PF13296 Putative type VI secretion system Rhs element Vgr MNQ97_14275 PF17871 AAA lid domain MNQ97_14275 PF10431 C-terminal, D2-small domain, of ClpB protein MNQ97_14275 PF07724 AAA domain (Cdc48 subfamily) MNQ97_14275 PF00004 ATPase family associated with various cellular activities (AAA) MNQ97_14285 PF00691 OmpA family MNQ97_14285 PF05736 OprF membrane domain MNQ97_14300 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath MNQ97_14310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_14310 PF03466 LysR substrate binding domain MNQ97_14315 PF08240 Alcohol dehydrogenase GroES-like domain MNQ97_14315 PF00107 Zinc-binding dehydrogenase MNQ97_14320 PF00455 DeoR C terminal sensor domain MNQ97_14320 PF08220 DeoR-like helix-turn-helix domain MNQ97_14340 PF01584 CheW-like domain MNQ97_14340 PF00072 Response regulator receiver domain MNQ97_14345 PF01554 MatE MNQ97_14350 PF00764 Arginosuccinate synthase MNQ97_14355 PF03825 Nucleoside H+ symporter MNQ97_14360 PF01048 Phosphorylase superfamily MNQ97_14370 PF03466 LysR substrate binding domain MNQ97_14370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_14375 PF02277 Phosphoribosyltransferase MNQ97_14380 PF00300 Histidine phosphatase superfamily (branch 1) MNQ97_14385 PF02654 Cobalamin-5-phosphate synthase MNQ97_14390 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase MNQ97_14395 PF07685 CobB/CobQ-like glutamine amidotransferase domain MNQ97_14400 PF00005 ABC transporter MNQ97_14405 PF02361 Cobalt transport protein MNQ97_14410 PF02553 Cobalt transport protein component CbiN MNQ97_14415 PF01891 Cobalt uptake substrate-specific transmembrane region MNQ97_14420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MNQ97_14425 PF06180 Cobalt chelatase (CbiK) MNQ97_14430 PF02571 Precorrin-6x reductase CbiJ/CobK MNQ97_14435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MNQ97_14440 PF01890 Cobalamin synthesis G C-terminus MNQ97_14440 PF11761 Cobalamin biosynthesis central region MNQ97_14440 PF11760 Cobalamin synthesis G N-terminal MNQ97_14445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MNQ97_14450 PF05175 Methyltransferase small domain MNQ97_14455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MNQ97_14460 PF01888 CbiD MNQ97_14465 PF02570 Precorrin-8X methylmutase MNQ97_14470 PF03186 CobD/Cbib protein MNQ97_14475 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MNQ97_14475 PF07685 CobB/CobQ-like glutamine amidotransferase domain MNQ97_14480 PF12833 Helix-turn-helix domain MNQ97_14480 PF10114 Sensory domain found in PocR MNQ97_14485 PF00230 Major intrinsic protein MNQ97_14490 PF00936 BMC domain MNQ97_14495 PF00936 BMC domain MNQ97_14500 PF02286 Dehydratase large subunit MNQ97_14505 PF02288 Dehydratase medium subunit MNQ97_14510 PF02287 Dehydratase small subunit MNQ97_14515 PF08841 Diol dehydratase reactivase ATPase-like domain MNQ97_14515 PF18427 DD-reactivating factor swiveling domain MNQ97_14525 PF00936 BMC domain MNQ97_14530 PF00936 BMC domain MNQ97_14535 PF06130 Phosphate propanoyltransferase MNQ97_14545 PF03319 Ethanolamine utilisation protein EutN/carboxysome MNQ97_14550 PF01923 Cobalamin adenosyltransferase MNQ97_14555 PF00171 Aldehyde dehydrogenase family MNQ97_14560 PF00465 Iron-containing alcohol dehydrogenase MNQ97_14565 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MNQ97_14565 PF13237 4Fe-4S dicluster domain MNQ97_14565 PF13375 RnfC Barrel sandwich hybrid domain MNQ97_14565 PF10531 SLBB domain MNQ97_14575 PF00936 BMC domain MNQ97_14580 PF10662 Ethanolamine utilisation - propanediol utilisation MNQ97_14585 PF00871 Acetokinase family MNQ97_14590 PF10414 Sirohaem synthase dimerisation region MNQ97_14590 PF14824 Sirohaem biosynthesis protein central MNQ97_14590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MNQ97_14595 PF00155 Aminotransferase class I and II MNQ97_14600 PF00288 GHMP kinases N terminal domain MNQ97_14605 PF13407 Periplasmic binding protein domain MNQ97_14610 PF00005 ABC transporter MNQ97_14615 PF02653 Branched-chain amino acid transport system / permease component MNQ97_14620 PF02653 Branched-chain amino acid transport system / permease component MNQ97_14625 PF04363 Protein of unknown function (DUF496) MNQ97_14640 PF08411 Exonuclease C-terminal MNQ97_14640 PF00929 Exonuclease MNQ97_14645 PF13520 Amino acid permease MNQ97_14650 PF00465 Iron-containing alcohol dehydrogenase MNQ97_14655 PF00005 ABC transporter MNQ97_14660 PF02653 Branched-chain amino acid transport system / permease component MNQ97_14665 PF01370 NAD dependent epimerase/dehydratase family MNQ97_14675 PF01634 ATP phosphoribosyltransferase MNQ97_14675 PF08029 HisG, C-terminal domain MNQ97_14680 PF00815 Histidinol dehydrogenase MNQ97_14685 PF00155 Aminotransferase class I and II MNQ97_14690 PF00475 Imidazoleglycerol-phosphate dehydratase MNQ97_14695 PF00117 Glutamine amidotransferase class-I MNQ97_14700 PF00977 Histidine biosynthesis protein MNQ97_14705 PF00977 Histidine biosynthesis protein MNQ97_14710 PF01502 Phosphoribosyl-AMP cyclohydrolase MNQ97_14710 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MNQ97_14715 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain MNQ97_14715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MNQ97_14730 PF13419 Haloacid dehalogenase-like hydrolase MNQ97_14740 PF00005 ABC transporter MNQ97_14775 PF00483 Nucleotidyl transferase MNQ97_14780 PF00483 Nucleotidyl transferase MNQ97_14785 PF00571 CBS domain MNQ97_14785 PF03471 Transporter associated domain MNQ97_14785 PF03741 Integral membrane protein TerC family MNQ97_14790 PF03606 C4-dicarboxylate anaerobic carrier MNQ97_14795 PF05170 AsmA family MNQ97_14800 PF00692 dUTPase MNQ97_14805 PF00485 Phosphoribulokinase / Uridine kinase family MNQ97_14810 PF10609 NUBPL iron-transfer P-loop NTPase MNQ97_14815 PF01588 Putative tRNA binding domain MNQ97_14815 PF09334 tRNA synthetases class I (M) MNQ97_14835 PF07690 Major Facilitator Superfamily MNQ97_14840 PF03788 LrgA family MNQ97_14845 PF04172 LrgB-like family MNQ97_14850 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region MNQ97_14850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MNQ97_14860 PF09278 MerR, DNA binding MNQ97_14860 PF00376 MerR family regulatory protein MNQ97_14865 PF03949 Malic enzyme, NAD binding domain MNQ97_14865 PF00390 Malic enzyme, N-terminal domain MNQ97_14870 PF02698 DUF218 domain MNQ97_14875 PF01455 HupF/HypC family MNQ97_14880 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MNQ97_14885 PF00037 4Fe-4S binding domain MNQ97_14885 PF12798 4Fe-4S binding domain MNQ97_14890 PF00361 Proton-conducting membrane transporter MNQ97_14895 PF00146 NADH dehydrogenase MNQ97_14900 PF00361 Proton-conducting membrane transporter MNQ97_14900 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MNQ97_14905 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MNQ97_14910 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MNQ97_14910 PF00361 Proton-conducting membrane transporter MNQ97_14915 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MNQ97_14915 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MNQ97_14915 PF00374 Nickel-dependent hydrogenase MNQ97_14920 PF12838 4Fe-4S dicluster domain MNQ97_14925 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MNQ97_14930 PF07450 Formate hydrogenlyase maturation protein HycH MNQ97_14935 PF01750 Hydrogenase maturation protease MNQ97_14940 PF13247 4Fe-4S dicluster domain MNQ97_14940 PF12800 4Fe-4S binding domain MNQ97_14945 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MNQ97_14945 PF00384 Molybdopterin oxidoreductase MNQ97_14945 PF01568 Molydopterin dinucleotide binding domain MNQ97_14950 PF01590 GAF domain MNQ97_14950 PF00158 Sigma-54 interaction domain MNQ97_14955 PF01226 Formate/nitrite transporter MNQ97_14960 PF02653 Branched-chain amino acid transport system / permease component MNQ97_14965 PF00005 ABC transporter MNQ97_14970 PF13407 Periplasmic binding protein domain MNQ97_14975 PF00356 Bacterial regulatory proteins, lacI family MNQ97_14980 PF04235 Protein of unknown function (DUF418) MNQ97_14985 PF01227 GTP cyclohydrolase I MNQ97_14990 PF06779 Uncharacterised MFS-type transporter YbfB MNQ97_14995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_14995 PF03466 LysR substrate binding domain MNQ97_15000 PF08240 Alcohol dehydrogenase GroES-like domain MNQ97_15000 PF00107 Zinc-binding dehydrogenase MNQ97_15005 PF00756 Putative esterase MNQ97_15025 PF00005 ABC transporter MNQ97_15035 PF00083 Sugar (and other) transporter MNQ97_15045 PF03453 MoeA N-terminal region (domain I and II) MNQ97_15045 PF00994 Probable molybdopterin binding domain MNQ97_15045 PF03454 MoeA C-terminal region (domain IV) MNQ97_15050 PF00899 ThiF family MNQ97_15055 PF00005 ABC transporter MNQ97_15055 PF12848 ABC transporter MNQ97_15075 PF13505 Outer membrane protein beta-barrel domain MNQ97_15085 PF00892 EamA-like transporter family MNQ97_15090 PF13847 Methyltransferase domain MNQ97_15095 PF00210 Ferritin-like domain MNQ97_15100 PF01258 Prokaryotic dksA/traR C4-type zinc finger MNQ97_15105 PF00497 Bacterial extracellular solute-binding proteins, family 3 MNQ97_15110 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_15115 PF00005 ABC transporter MNQ97_15120 PF05971 RNA methyltransferase MNQ97_15125 PF02885 Glycosyl transferase family, helical bundle domain MNQ97_15130 PF00230 Major intrinsic protein MNQ97_15135 PF06733 DEAD_2 MNQ97_15135 PF13307 Helicase C-terminal domain MNQ97_15140 PF00267 Gram-negative porin MNQ97_15150 PF00892 EamA-like transporter family MNQ97_15160 PF03466 LysR substrate binding domain MNQ97_15160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_15175 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_15180 PF00005 ABC transporter MNQ97_15185 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_15190 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MNQ97_15200 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MNQ97_15200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MNQ97_15205 PF00581 Rhodanese-like domain MNQ97_15210 PF00005 ABC transporter MNQ97_15215 PF00005 ABC transporter MNQ97_15215 PF12399 Branched-chain amino acid ATP-binding cassette transporter MNQ97_15220 PF02653 Branched-chain amino acid transport system / permease component MNQ97_15225 PF02653 Branched-chain amino acid transport system / permease component MNQ97_15235 PF07308 Protein of unknown function (DUF1456) MNQ97_15240 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_15245 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_15255 PF00005 ABC transporter MNQ97_15260 PF04226 Transglycosylase associated protein MNQ97_15270 PF01844 HNH endonuclease MNQ97_15275 PF01928 CYTH domain MNQ97_15280 PF01565 FAD binding domain MNQ97_15280 PF09330 D-lactate dehydrogenase, membrane binding MNQ97_15285 PF00768 D-alanyl-D-alanine carboxypeptidase MNQ97_15295 PF01769 Divalent cation transporter MNQ97_15295 PF03448 MgtE intracellular N domain MNQ97_15295 PF00571 CBS domain MNQ97_15300 PF01207 Dihydrouridine synthase (Dus) MNQ97_15305 PF00271 Helicase conserved C-terminal domain MNQ97_15305 PF00270 DEAD/DEAH box helicase MNQ97_15310 PF00440 Bacterial regulatory proteins, tetR family MNQ97_15310 PF09209 Tetracyclin repressor-like, C-terminal domain MNQ97_15315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MNQ97_15320 PF00005 ABC transporter MNQ97_15335 PF01027 Inhibitor of apoptosis-promoting Bax1 MNQ97_15340 PF02391 MoaE protein MNQ97_15345 PF02597 ThiS family MNQ97_15350 PF01967 MoaC family MNQ97_15355 PF06463 Molybdenum Cofactor Synthesis C MNQ97_15355 PF04055 Radical SAM superfamily MNQ97_15360 PF01933 Uncharacterised protein family UPF0052 MNQ97_15365 PF00005 ABC transporter MNQ97_15370 PF01032 FecCD transport family MNQ97_15390 PF09905 DNA-binding protein VF530 MNQ97_15395 PF17757 UvrB interaction domain MNQ97_15395 PF12344 Ultra-violet resistance protein B MNQ97_15395 PF04851 Type III restriction enzyme, res subunit MNQ97_15395 PF00271 Helicase conserved C-terminal domain MNQ97_15395 PF02151 UvrB/uvrC motif MNQ97_15400 PF00005 ABC transporter MNQ97_15410 PF08241 Methyltransferase domain MNQ97_15415 PF00155 Aminotransferase class I and II MNQ97_15420 PF06968 Biotin and Thiamin Synthesis associated domain MNQ97_15420 PF04055 Radical SAM superfamily MNQ97_15425 PF00202 Aminotransferase class-III MNQ97_15430 PF10282 Lactonase, 7-bladed beta-propeller MNQ97_15440 PF00005 ABC transporter MNQ97_15440 PF03459 TOBE domain MNQ97_15445 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_15455 PF10766 Multidrug efflux pump-associated protein AcrZ MNQ97_15460 PF03459 TOBE domain MNQ97_15460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_15465 PF00005 ABC transporter MNQ97_15475 PF16363 GDP-mannose 4,6 dehydratase MNQ97_15480 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain MNQ97_15480 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain MNQ97_15485 PF00288 GHMP kinases N terminal domain MNQ97_15485 PF10509 Galactokinase galactose-binding signature MNQ97_15485 PF08544 GHMP kinases C terminal MNQ97_15490 PF01263 Aldose 1-epimerase MNQ97_15495 PF07769 psiF repeat MNQ97_15500 PF00300 Histidine phosphatase superfamily (branch 1) MNQ97_15505 PF00793 DAHP synthetase I family MNQ97_15510 PF00072 Response regulator receiver domain MNQ97_15510 PF00196 Bacterial regulatory proteins, luxR family MNQ97_15515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_15515 PF01627 Hpt domain MNQ97_15515 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_15515 PF00989 PAS fold MNQ97_15515 PF00497 Bacterial extracellular solute-binding proteins, family 3 MNQ97_15515 PF00072 Response regulator receiver domain MNQ97_15520 PF01545 Cation efflux family MNQ97_15525 PF04973 Nicotinamide mononucleotide transporter MNQ97_15530 PF02445 Quinolinate synthetase A protein MNQ97_15565 PF16331 TolA binding protein trimerisation MNQ97_15565 PF13174 Tetratricopeptide repeat MNQ97_15570 PF00691 OmpA family MNQ97_15575 PF04052 TolB amino-terminal domain MNQ97_15575 PF07676 WD40-like Beta Propeller Repeat MNQ97_15580 PF06519 TolA C-terminal MNQ97_15580 PF06519 TolA C-terminal MNQ97_15585 PF02472 Biopolymer transport protein ExbD/TolR MNQ97_15590 PF01618 MotA/TolQ/ExbB proton channel family MNQ97_15595 PF03061 Thioesterase superfamily MNQ97_15600 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) MNQ97_15605 PF08173 Membrane bound YbgT-like protein MNQ97_15610 PF02322 Cytochrome bd terminal oxidase subunit II MNQ97_15615 PF01654 Cytochrome bd terminal oxidase subunit I MNQ97_15620 PF00149 Calcineurin-like phosphoesterase MNQ97_15620 PF02872 5'-nucleotidase, C-terminal domain MNQ97_15625 PF02629 CoA binding domain MNQ97_15625 PF00549 CoA-ligase MNQ97_15630 PF00549 CoA-ligase MNQ97_15630 PF08442 ATP-grasp domain MNQ97_15635 PF02817 e3 binding domain MNQ97_15635 PF00364 Biotin-requiring enzyme MNQ97_15635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MNQ97_15640 PF16078 2-oxoglutarate dehydrogenase N-terminus MNQ97_15640 PF02779 Transketolase, pyrimidine binding domain MNQ97_15640 PF00676 Dehydrogenase E1 component MNQ97_15640 PF16870 2-oxoglutarate dehydrogenase C-terminal MNQ97_15645 PF13085 2Fe-2S iron-sulfur cluster binding domain MNQ97_15650 PF02910 Fumarate reductase flavoprotein C-term MNQ97_15650 PF00890 FAD binding domain MNQ97_15655 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MNQ97_15660 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MNQ97_15665 PF00285 Citrate synthase, C-terminal domain MNQ97_15670 PF01470 Pyroglutamyl peptidase MNQ97_15685 PF03746 LamB/YcsF family MNQ97_15690 PF02626 Carboxyltransferase domain, subdomain A and B MNQ97_15695 PF02682 Carboxyltransferase domain, subdomain C and D MNQ97_15700 PF01784 NIF3 (NGG1p interacting factor 3) MNQ97_15705 PF02112 cAMP phosphodiesterases class-II MNQ97_15710 PF00875 DNA photolyase MNQ97_15710 PF03441 FAD binding domain of DNA photolyase MNQ97_15715 PF08349 Protein of unknown function (DUF1722) MNQ97_15720 PF10725 Protein of unknown function (DUF2517) MNQ97_15725 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) MNQ97_15730 PF03814 Potassium-transporting ATPase A subunit MNQ97_15740 PF02669 K+-transporting ATPase, c chain MNQ97_15745 PF13493 Domain of unknown function (DUF4118) MNQ97_15745 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_15745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_15745 PF13492 GAF domain MNQ97_15745 PF02702 Osmosensitive K+ channel His kinase sensor domain MNQ97_15750 PF00072 Response regulator receiver domain MNQ97_15750 PF00486 Transcriptional regulatory protein, C terminal MNQ97_15760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MNQ97_15760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MNQ97_15760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MNQ97_15760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MNQ97_15765 PF17206 SeqA protein N-terminal domain MNQ97_15765 PF03925 SeqA protein C-terminal domain MNQ97_15775 PF00355 Rieske [2Fe-2S] domain MNQ97_15780 PF04820 Tryptophan halogenase MNQ97_15785 PF08933 Domain of unknown function (DUF1864) MNQ97_15790 PF04820 Tryptophan halogenase MNQ97_15795 PF12697 Alpha/beta hydrolase family MNQ97_15800 PF01402 Ribbon-helix-helix protein, copG family MNQ97_15805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MNQ97_15805 PF02203 Tar ligand binding domain homologue MNQ97_15805 PF00672 HAMP domain MNQ97_15810 PF00258 Flavodoxin MNQ97_15815 PF01475 Ferric uptake regulator family MNQ97_15820 PF03173 Putative carbohydrate binding domain MNQ97_15820 PF02838 Glycosyl hydrolase family 20, domain 2 MNQ97_15820 PF00728 Glycosyl hydrolase family 20, catalytic domain MNQ97_15820 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain MNQ97_15825 PF13982 YbfN-like lipoprotein MNQ97_15830 PF03573 outer membrane porin, OprD family MNQ97_15835 PF00749 tRNA synthetases class I (E and Q), catalytic domain MNQ97_15835 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MNQ97_15840 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MNQ97_15840 PF00367 phosphotransferase system, EIIB MNQ97_15840 PF02378 Phosphotransferase system, EIIC MNQ97_15845 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MNQ97_15850 PF01979 Amidohydrolase family MNQ97_15855 PF01047 MarR family MNQ97_15855 PF00480 ROK family MNQ97_15860 PF13344 Haloacid dehalogenase-like hydrolase MNQ97_15865 PF00733 Asparagine synthase MNQ97_15865 PF13537 Glutamine amidotransferase domain MNQ97_15900 PF01494 FAD binding domain MNQ97_15905 PF04055 Radical SAM superfamily MNQ97_15905 PF01938 TRAM domain MNQ97_15905 PF00919 Uncharacterized protein family UPF0004 MNQ97_15910 PF02562 PhoH-like protein MNQ97_15915 PF02130 Uncharacterized protein family UPF0054 MNQ97_15920 PF00571 CBS domain MNQ97_15920 PF03471 Transporter associated domain MNQ97_15925 PF00795 Carbon-nitrogen hydrolase MNQ97_15935 PF00497 Bacterial extracellular solute-binding proteins, family 3 MNQ97_15940 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_15945 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_15950 PF00005 ABC transporter MNQ97_15955 PF01156 Inosine-uridine preferring nucleoside hydrolase MNQ97_15960 PF07295 Zinc-ribbon containing domain MNQ97_15965 PF00133 tRNA synthetases class I (I, L, M and V) MNQ97_15965 PF13603 Leucyl-tRNA synthetase, Domain 2 MNQ97_15965 PF08264 Anticodon-binding domain of tRNA MNQ97_15970 PF04390 Lipopolysaccharide-assembly MNQ97_15975 PF14840 Processivity clamp loader gamma complex DNA pol III C-term MNQ97_15975 PF06144 DNA polymerase III, delta subunit MNQ97_15980 PF01467 Cytidylyltransferase-like MNQ97_15990 PF02590 Predicted SPOUT methyltransferase MNQ97_15995 PF03717 Penicillin-binding Protein dimerisation domain MNQ97_15995 PF00905 Penicillin binding protein transpeptidase domain MNQ97_16000 PF01098 Cell cycle protein MNQ97_16005 PF03330 Lytic transglycolase MNQ97_16005 PF05036 Sporulation related domain MNQ97_16010 PF07943 Penicillin-binding protein 5, C-terminal domain MNQ97_16010 PF00768 D-alanyl-D-alanine carboxypeptidase MNQ97_16015 PF04359 Protein of unknown function (DUF493) MNQ97_16020 PF03099 Biotin/lipoate A/B protein ligase family MNQ97_16025 PF04055 Radical SAM superfamily MNQ97_16025 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MNQ97_16030 PF02416 mttA/Hcf106 family MNQ97_16035 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_16035 PF05230 MASE2 domain MNQ97_16040 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MNQ97_16050 PF00313 'Cold-shock' DNA-binding domain MNQ97_16055 PF00313 'Cold-shock' DNA-binding domain MNQ97_16060 PF00196 Bacterial regulatory proteins, luxR family MNQ97_16070 PF00149 Calcineurin-like phosphoesterase MNQ97_16090 PF00664 ABC transporter transmembrane region MNQ97_16090 PF00005 ABC transporter MNQ97_16100 PF08007 Cupin superfamily protein MNQ97_16105 PF02502 Ribose/Galactose Isomerase MNQ97_16110 PF01418 Helix-turn-helix domain, rpiR family MNQ97_16110 PF01380 SIS domain MNQ97_16115 PF13407 Periplasmic binding protein domain MNQ97_16120 PF00005 ABC transporter MNQ97_16125 PF02653 Branched-chain amino acid transport system / permease component MNQ97_16130 PF00834 Ribulose-phosphate 3 epimerase family MNQ97_16135 PF00480 ROK family MNQ97_16140 PF05280 Flagellar transcriptional activator (FlhC) MNQ97_16145 PF05247 Flagellar transcriptional activator (FlhD) MNQ97_16150 PF02447 GntP family permease MNQ97_16180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MNQ97_16185 PF00440 Bacterial regulatory proteins, tetR family MNQ97_16205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_16205 PF03466 LysR substrate binding domain MNQ97_16220 PF13417 Glutathione S-transferase, N-terminal domain MNQ97_16220 PF04399 Glutaredoxin 2, C terminal domain MNQ97_16240 PF00583 Acetyltransferase (GNAT) family MNQ97_16270 PF00849 RNA pseudouridylate synthase MNQ97_16275 PF02321 Outer membrane efflux protein MNQ97_16280 PF00529 HlyD membrane-fusion protein of T1SS MNQ97_16285 PF00664 ABC transporter transmembrane region MNQ97_16285 PF00005 ABC transporter MNQ97_16290 PF02974 Protease inhibitor Inh MNQ97_16295 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) MNQ97_16295 PF08548 Peptidase M10 serralysin C terminal MNQ97_16295 PF00413 Matrixin MNQ97_16300 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) MNQ97_16300 PF00413 Matrixin MNQ97_16300 PF08548 Peptidase M10 serralysin C terminal MNQ97_16335 PF00657 GDSL-like Lipase/Acylhydrolase MNQ97_16345 PF12833 Helix-turn-helix domain MNQ97_16350 PF02056 Family 4 glycosyl hydrolase MNQ97_16350 PF11975 Family 4 glycosyl hydrolase C-terminal domain MNQ97_16360 PF04193 PQ loop repeat MNQ97_16365 PF11230 Protein of unknown function (DUF3029) MNQ97_16370 PF04055 Radical SAM superfamily MNQ97_16485 PF02369 Bacterial Ig-like domain (group 1) MNQ97_16485 PF09134 Invasin, domain 3 MNQ97_16485 PF11924 Inverse autotransporter, beta-domain MNQ97_16495 PF00196 Bacterial regulatory proteins, luxR family MNQ97_16515 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_16515 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_16520 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_16520 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_16535 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_16535 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_16545 PF00072 Response regulator receiver domain MNQ97_16545 PF00196 Bacterial regulatory proteins, luxR family MNQ97_16550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_16550 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_16550 PF01627 Hpt domain MNQ97_16550 PF00072 Response regulator receiver domain MNQ97_16550 PF00497 Bacterial extracellular solute-binding proteins, family 3 MNQ97_16670 PF06530 Phage antitermination protein Q MNQ97_16740 PF00589 Phage integrase family MNQ97_16740 PF14659 Phage integrase, N-terminal SAM-like domain MNQ97_16740 PF13356 Arm DNA-binding domain MNQ97_16750 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MNQ97_16750 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MNQ97_16760 PF01406 tRNA synthetases class I (C) catalytic domain MNQ97_16760 PF09190 DALR domain MNQ97_16765 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MNQ97_16770 PF00149 Calcineurin-like phosphoesterase MNQ97_16775 PF00731 AIR carboxylase MNQ97_16780 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MNQ97_16780 PF02222 ATP-grasp domain MNQ97_16790 PF00005 ABC transporter MNQ97_16795 PF13472 GDSL-like Lipase/Acylhydrolase family MNQ97_16800 PF00106 short chain dehydrogenase MNQ97_16805 PF00085 Thioredoxin MNQ97_16810 PF16200 C-terminal region of band_7 MNQ97_16810 PF01145 SPFH domain / Band 7 family MNQ97_16815 PF01957 NfeD-like C-terminal, partner-binding MNQ97_16820 PF13411 MerR HTH family regulatory protein MNQ97_16825 PF00403 Heavy-metal-associated domain MNQ97_16830 PF01963 TraB family MNQ97_16835 PF04073 Aminoacyl-tRNA editing domain MNQ97_16840 PF00149 Calcineurin-like phosphoesterase MNQ97_16840 PF02872 5'-nucleotidase, C-terminal domain MNQ97_16845 PF07690 Major Facilitator Superfamily MNQ97_16850 PF00999 Sodium/hydrogen exchanger family MNQ97_16850 PF02254 TrkA-N domain MNQ97_16855 PF00294 pfkB family carbohydrate kinase MNQ97_16865 PF16363 GDP-mannose 4,6 dehydratase MNQ97_16870 PF00534 Glycosyl transferases group 1 MNQ97_16870 PF13439 Glycosyltransferase Family 4 MNQ97_16875 PF01370 NAD dependent epimerase/dehydratase family MNQ97_16890 PF16363 GDP-mannose 4,6 dehydratase MNQ97_16900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MNQ97_16900 PF00205 Thiamine pyrophosphate enzyme, central domain MNQ97_16900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MNQ97_16905 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MNQ97_16910 PF16363 GDP-mannose 4,6 dehydratase MNQ97_16915 PF00483 Nucleotidyl transferase MNQ97_16920 PF00970 Oxidoreductase FAD-binding domain MNQ97_16920 PF00175 Oxidoreductase NAD-binding domain MNQ97_16920 PF00111 2Fe-2S iron-sulfur cluster binding domain MNQ97_16925 PF00762 Ferrochelatase MNQ97_16930 PF05191 Adenylate kinase, active site lid MNQ97_16935 PF00183 Hsp90 protein MNQ97_16935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_16940 PF02132 RecR protein MNQ97_16940 PF13662 Toprim domain MNQ97_16945 PF02575 YbaB/EbfC DNA-binding family MNQ97_16950 PF12169 DNA polymerase III subunits gamma and tau domain III MNQ97_16950 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MNQ97_16950 PF12170 DNA polymerase III tau subunit V interacting with alpha MNQ97_16955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MNQ97_16965 PF00156 Phosphoribosyl transferase domain MNQ97_16970 PF04304 Protein of unknown function (DUF454) MNQ97_16980 PF10689 Protein of unknown function (DUF2496) MNQ97_16985 PF00924 Mechanosensitive ion channel MNQ97_16985 PF12794 Mechanosensitive ion channel inner membrane domain 1 MNQ97_16985 PF12795 Mechanosensitive ion channel porin domain MNQ97_16990 PF02635 DsrE/DsrF-like family MNQ97_16995 PF08361 MAATS-type transcriptional repressor, C-terminal region MNQ97_16995 PF00440 Bacterial regulatory proteins, tetR family MNQ97_17000 PF00529 HlyD membrane-fusion protein of T1SS MNQ97_17000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MNQ97_17005 PF00873 AcrB/AcrD/AcrF family MNQ97_17010 PF01197 Ribosomal protein L31 MNQ97_17015 PF00444 Ribosomal protein L36 MNQ97_17020 PF01297 Zinc-uptake complex component A periplasmic MNQ97_17025 PF00950 ABC 3 transport family MNQ97_17030 PF00005 ABC transporter MNQ97_17040 PF10757 Biofilm formation regulator YbaJ MNQ97_17045 PF05321 Haemolysin expression modulating protein MNQ97_17055 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MNQ97_17060 PF09619 Type III secretion system lipoprotein chaperone (YscW) MNQ97_17070 PF00909 Ammonium Transporter Family MNQ97_17075 PF00543 Nitrogen regulatory protein P-II MNQ97_17080 PF00664 ABC transporter transmembrane region MNQ97_17080 PF00005 ABC transporter MNQ97_17085 PF00005 ABC transporter MNQ97_17085 PF00664 ABC transporter transmembrane region MNQ97_17090 PF01037 Lrp/AsnC ligand binding domain MNQ97_17090 PF13404 AsnC-type helix-turn-helix domain MNQ97_17105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MNQ97_17105 PF12793 Sugar transport-related sRNA regulator N-term MNQ97_17110 PF06508 Queuosine biosynthesis protein QueC MNQ97_17125 PF13145 PPIC-type PPIASE domain MNQ97_17130 PF00216 Bacterial DNA-binding protein MNQ97_17135 PF00004 ATPase family associated with various cellular activities (AAA) MNQ97_17135 PF05362 Lon protease (S16) C-terminal proteolytic domain MNQ97_17135 PF02190 ATP-dependent protease La (LON) substrate-binding domain MNQ97_17140 PF07724 AAA domain (Cdc48 subfamily) MNQ97_17140 PF10431 C-terminal, D2-small domain, of ClpB protein MNQ97_17140 PF06689 ClpX C4-type zinc finger MNQ97_17145 PF00574 Clp protease MNQ97_17150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MNQ97_17150 PF05698 Bacterial trigger factor protein (TF) C-terminus MNQ97_17150 PF05697 Bacterial trigger factor protein (TF) MNQ97_17155 PF01722 BolA-like protein MNQ97_17160 PF03923 Uncharacterized lipoprotein MNQ97_17160 PF08139 Prokaryotic membrane lipoprotein lipid attachment site MNQ97_17165 PF07690 Major Facilitator Superfamily MNQ97_17170 PF03502 Nucleoside-specific channel-forming protein, Tsx MNQ97_17175 PF06481 COX Aromatic Rich Motif MNQ97_17175 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MNQ97_17180 PF00115 Cytochrome C and Quinol oxidase polypeptide I MNQ97_17185 PF00510 Cytochrome c oxidase subunit III MNQ97_17190 PF03626 Prokaryotic Cytochrome C oxidase subunit IV MNQ97_17195 PF01040 UbiA prenyltransferase family MNQ97_17200 PF07690 Major Facilitator Superfamily MNQ97_17205 PF04461 Protein of unknown function (DUF520) MNQ97_17210 PF02558 Ketopantoate reductase PanE/ApbA MNQ97_17210 PF08546 Ketopantoate reductase PanE/ApbA C terminal MNQ97_17215 PF01965 DJ-1/PfpI family MNQ97_17220 PF02568 Thiamine biosynthesis protein (ThiI) MNQ97_17220 PF02926 THUMP domain MNQ97_17225 PF02609 Exonuclease VII small subunit MNQ97_17230 PF00348 Polyprenyl synthetase MNQ97_17235 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MNQ97_17235 PF02779 Transketolase, pyrimidine binding domain MNQ97_17235 PF02780 Transketolase, C-terminal domain MNQ97_17240 PF04608 Phosphatidylglycerophosphatase A MNQ97_17245 PF00586 AIR synthase related protein, N-terminal domain MNQ97_17245 PF02769 AIR synthase related protein, C-terminal domain MNQ97_17250 PF01029 NusB family MNQ97_17255 PF00885 6,7-dimethyl-8-ribityllumazine synthase MNQ97_17260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MNQ97_17260 PF01872 RibD C-terminal domain MNQ97_17265 PF03477 ATP cone domain MNQ97_17275 PF02355 Protein export membrane protein MNQ97_17275 PF07549 SecD/SecF GG Motif MNQ97_17280 PF07549 SecD/SecF GG Motif MNQ97_17280 PF13721 SecD export protein N-terminal TM region MNQ97_17280 PF02355 Protein export membrane protein MNQ97_17285 PF02699 Preprotein translocase subunit MNQ97_17290 PF01702 Queuine tRNA-ribosyltransferase MNQ97_17295 PF02547 Queuosine biosynthesis protein MNQ97_17300 PF04336 Acyl carrier protein phosphodiesterase MNQ97_17305 PF10417 C-terminal domain of 1-Cys peroxiredoxin MNQ97_17305 PF00578 AhpC/TSA family MNQ97_17310 PF01848 Hok/gef family MNQ97_17325 PF02903 Alpha amylase, N-terminal ig-like domain MNQ97_17325 PF00128 Alpha amylase, catalytic domain MNQ97_17330 PF00324 Amino acid permease MNQ97_17335 PF05525 Branched-chain amino acid transport protein MNQ97_17340 PF12849 PBP superfamily domain MNQ97_17345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_17345 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_17345 PF00989 PAS fold MNQ97_17345 PF11808 Phosphate regulon sensor protein PhoR MNQ97_17350 PF00072 Response regulator receiver domain MNQ97_17350 PF00486 Transcriptional regulatory protein, C terminal MNQ97_17355 PF00149 Calcineurin-like phosphoesterase MNQ97_17355 PF12320 Type 5 capsule protein repressor C-terminal domain MNQ97_17360 PF13476 AAA domain MNQ97_17365 PF00480 ROK family MNQ97_17370 PF04381 Putative exonuclease, RdgC MNQ97_17375 PF06865 Pyrimidine/purine nucleoside phosphorylase MNQ97_17380 PF01202 Shikimate kinase MNQ97_17395 PF08241 Methyltransferase domain MNQ97_17410 PF10091 Putative glucoamylase MNQ97_17410 PF06165 Glycosyltransferase family 36 MNQ97_17410 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain MNQ97_17415 PF07238 PilZ domain MNQ97_17415 PF07317 Flagellar regulator YcgR MNQ97_17420 PF07662 Na+ dependent nucleoside transporter C-terminus MNQ97_17420 PF01773 Na+ dependent nucleoside transporter N-terminus MNQ97_17425 PF04227 Indigoidine synthase A like protein MNQ97_17430 PF00294 pfkB family carbohydrate kinase MNQ97_17435 PF00171 Aldehyde dehydrogenase family MNQ97_17440 PF00696 Amino acid kinase family MNQ97_17440 PF01472 PUA domain MNQ97_17445 PF07417 Sigma factor-binding transcriptional regulator Crl MNQ97_17450 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) MNQ97_17455 PF00156 Phosphoribosyl transferase domain MNQ97_17460 PF07687 Peptidase dimerisation domain MNQ97_17460 PF01546 Peptidase family M20/M25/M40 MNQ97_17465 PF00817 impB/mucB/samB family MNQ97_17465 PF11798 IMS family HHH motif MNQ97_17465 PF11799 impB/mucB/samB family C-terminal domain MNQ97_17470 PF07478 D-ala D-ala ligase C-terminus MNQ97_17470 PF01820 D-ala D-ala ligase N-terminus MNQ97_17475 PF03009 Glycerophosphoryl diester phosphodiesterase family MNQ97_17480 PF04400 (Na+)-NQR maturation NqrM MNQ97_17485 PF02424 ApbE family MNQ97_17490 PF00970 Oxidoreductase FAD-binding domain MNQ97_17490 PF00111 2Fe-2S iron-sulfur cluster binding domain MNQ97_17490 PF00175 Oxidoreductase NAD-binding domain MNQ97_17495 PF02508 Rnf-Nqr subunit, membrane protein MNQ97_17500 PF02508 Rnf-Nqr subunit, membrane protein MNQ97_17505 PF04205 FMN-binding domain MNQ97_17510 PF03116 NQR2, RnfD, RnfE family MNQ97_17515 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) MNQ97_17515 PF11973 NQRA C-terminal domain MNQ97_17520 PF03734 L,D-transpeptidase catalytic domain MNQ97_17525 PF13230 Glutamine amidotransferases class-II MNQ97_17530 PF13580 SIS domain MNQ97_17535 PF09317 Domain of unknown function (DUF1974) MNQ97_17535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MNQ97_17535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MNQ97_17540 PF18254 HMW1 domain 2 MNQ97_17540 PF18071 HMW1C N-terminal MNQ97_17550 PF08479 POTRA domain, ShlB-type MNQ97_17550 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB MNQ97_17555 PF01636 Phosphotransferase enzyme family MNQ97_17560 PF01008 Initiation factor 2 subunit family MNQ97_17565 PF03079 ARD/ARD' family MNQ97_17575 PF00596 Class II Aldolase and Adducin N-terminal domain MNQ97_17580 PF00155 Aminotransferase class I and II MNQ97_17585 PF00795 Carbon-nitrogen hydrolase MNQ97_17590 PF07687 Peptidase dimerisation domain MNQ97_17590 PF01546 Peptidase family M20/M25/M40 MNQ97_17595 PF00266 Aminotransferase class-V MNQ97_17605 PF07690 Major Facilitator Superfamily MNQ97_17610 PF03591 AzlC protein MNQ97_17615 PF05437 Branched-chain amino acid transport protein (AzlD) MNQ97_17620 PF01047 MarR family MNQ97_17630 PF00529 HlyD membrane-fusion protein of T1SS MNQ97_17630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MNQ97_17635 PF07690 Major Facilitator Superfamily MNQ97_17640 PF00588 SpoU rRNA Methylase family MNQ97_17640 PF08032 RNA 2'-O ribose methyltransferase substrate binding MNQ97_17645 PF00085 Thioredoxin MNQ97_17650 PF03942 DTW domain MNQ97_17655 PF13380 CoA binding domain MNQ97_17655 PF13607 Succinyl-CoA ligase like flavodoxin domain MNQ97_17655 PF00583 Acetyltransferase (GNAT) family MNQ97_17660 PF13091 PLD-like domain MNQ97_17665 PF10043 Predicted periplasmic lipoprotein (DUF2279) MNQ97_17690 PF00004 ATPase family associated with various cellular activities (AAA) MNQ97_17690 PF07724 AAA domain (Cdc48 subfamily) MNQ97_17690 PF02861 Clp amino terminal domain, pathogenicity island component MNQ97_17690 PF10431 C-terminal, D2-small domain, of ClpB protein MNQ97_17690 PF17871 AAA lid domain MNQ97_17695 PF02578 Multi-copper polyphenol oxidoreductase laccase MNQ97_17700 PF01479 S4 domain MNQ97_17700 PF00849 RNA pseudouridylate synthase MNQ97_17705 PF13525 Outer membrane lipoprotein MNQ97_17710 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MNQ97_17715 PF00800 Prephenate dehydratase MNQ97_17715 PF01817 Chorismate mutase type II MNQ97_17720 PF02153 Prephenate dehydrogenase MNQ97_17720 PF01817 Chorismate mutase type II MNQ97_17725 PF00793 DAHP synthetase I family MNQ97_17730 PF00072 Response regulator receiver domain MNQ97_17730 PF04397 LytTr DNA-binding domain MNQ97_17735 PF03605 Anaerobic c4-dicarboxylate membrane transporter MNQ97_17740 PF04338 Protein of unknown function, DUF481 MNQ97_17745 PF01245 Ribosomal protein L19 MNQ97_17750 PF01746 tRNA (Guanine-1)-methyltransferase MNQ97_17755 PF05239 PRC-barrel domain MNQ97_17755 PF01782 RimM N-terminal domain MNQ97_17760 PF00886 Ribosomal protein S16 MNQ97_17765 PF00448 SRP54-type protein, GTPase domain MNQ97_17765 PF02978 Signal peptide binding domain MNQ97_17765 PF02881 SRP54-type protein, helical bundle domain MNQ97_17770 PF01578 Cytochrome C assembly protein MNQ97_17775 PF00571 CBS domain MNQ97_17775 PF03471 Transporter associated domain MNQ97_17775 PF01595 Cyclin M transmembrane N-terminal domain MNQ97_17780 PF02664 S-Ribosylhomocysteinase (LuxS) MNQ97_17785 PF04262 Glutamate-cysteine ligase MNQ97_17790 PF09335 SNARE associated Golgi protein MNQ97_17795 PF13419 Haloacid dehalogenase-like hydrolase MNQ97_17825 PF02599 Global regulator protein family MNQ97_17830 PF02272 DHHA1 domain MNQ97_17830 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MNQ97_17830 PF01411 tRNA synthetases class II (A) MNQ97_17835 PF02631 RecX family MNQ97_17840 PF00154 recA bacterial DNA recombination protein MNQ97_17845 PF02464 Competence-damaged protein MNQ97_17850 PF07690 Major Facilitator Superfamily MNQ97_17865 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MNQ97_17865 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MNQ97_17870 PF02779 Transketolase, pyrimidine binding domain MNQ97_17870 PF02780 Transketolase, C-terminal domain MNQ97_17875 PF00456 Transketolase, thiamine diphosphate binding domain MNQ97_17880 PF02653 Branched-chain amino acid transport system / permease component MNQ97_17885 PF00005 ABC transporter MNQ97_17895 PF13407 Periplasmic binding protein domain MNQ97_17910 PF02613 Nitrate reductase delta subunit MNQ97_17915 PF04976 DMSO reductase anchor subunit (DmsC) MNQ97_17920 PF13247 4Fe-4S dicluster domain MNQ97_17920 PF12800 4Fe-4S binding domain MNQ97_17925 PF01568 Molydopterin dinucleotide binding domain MNQ97_17925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MNQ97_17925 PF00384 Molybdopterin oxidoreductase MNQ97_17930 PF00465 Iron-containing alcohol dehydrogenase MNQ97_17935 PF00596 Class II Aldolase and Adducin N-terminal domain MNQ97_17940 PF07690 Major Facilitator Superfamily MNQ97_17945 PF07882 L-fucose isomerase, second N-terminal domain MNQ97_17945 PF07881 L-fucose isomerase, first N-terminal domain MNQ97_17945 PF02952 L-fucose isomerase, C-terminal domain MNQ97_17950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MNQ97_17950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MNQ97_17955 PF05025 RbsD / FucU transport protein family MNQ97_17960 PF00455 DeoR C terminal sensor domain MNQ97_17960 PF08220 DeoR-like helix-turn-helix domain MNQ97_17965 PF00596 Class II Aldolase and Adducin N-terminal domain MNQ97_17970 PF08220 DeoR-like helix-turn-helix domain MNQ97_17970 PF00455 DeoR C terminal sensor domain MNQ97_17980 PF00005 ABC transporter MNQ97_17985 PF02653 Branched-chain amino acid transport system / permease component MNQ97_17990 PF02653 Branched-chain amino acid transport system / permease component MNQ97_17995 PF01261 Xylose isomerase-like TIM barrel MNQ97_18000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MNQ97_18000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MNQ97_18005 PF05681 Fumarate hydratase (Fumerase) MNQ97_18005 PF05683 Fumarase C-terminus MNQ97_18015 PF13458 Periplasmic binding protein MNQ97_18020 PF02653 Branched-chain amino acid transport system / permease component MNQ97_18025 PF02653 Branched-chain amino acid transport system / permease component MNQ97_18025 PF11862 Domain of unknown function (DUF3382) MNQ97_18030 PF00005 ABC transporter MNQ97_18035 PF00005 ABC transporter MNQ97_18055 PF00795 Carbon-nitrogen hydrolase MNQ97_18060 PF04198 Putative sugar-binding domain MNQ97_18060 PF13936 Helix-turn-helix domain MNQ97_18065 PF03610 PTS system fructose IIA component MNQ97_18070 PF03830 PTS system sorbose subfamily IIB component MNQ97_18075 PF03609 PTS system sorbose-specific iic component MNQ97_18080 PF03613 PTS system mannose/fructose/sorbose family IID component MNQ97_18085 PF00107 Zinc-binding dehydrogenase MNQ97_18085 PF08240 Alcohol dehydrogenase GroES-like domain MNQ97_18100 PF01022 Bacterial regulatory protein, arsR family MNQ97_18105 PF03144 Elongation factor Tu domain 2 MNQ97_18105 PF03764 Elongation factor G, domain IV MNQ97_18105 PF00679 Elongation factor G C-terminus MNQ97_18105 PF00009 Elongation factor Tu GTP binding domain MNQ97_18105 PF14492 Elongation Factor G, domain II MNQ97_18110 PF02705 K+ potassium transporter MNQ97_18115 PF00291 Pyridoxal-phosphate dependent enzyme MNQ97_18120 PF02447 GntP family permease MNQ97_18125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_18125 PF03466 LysR substrate binding domain MNQ97_18130 PF00005 ABC transporter MNQ97_18130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MNQ97_18135 PF00005 ABC transporter MNQ97_18135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MNQ97_18140 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_18140 PF12911 N-terminal TM domain of oligopeptide transport permease C MNQ97_18145 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_18150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MNQ97_18155 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MNQ97_18155 PF13378 Enolase C-terminal domain-like MNQ97_18175 PF02801 Beta-ketoacyl synthase, C-terminal domain MNQ97_18175 PF00109 Beta-ketoacyl synthase, N-terminal domain MNQ97_18180 PF02321 Outer membrane efflux protein MNQ97_18185 PF02687 FtsX-like permease family MNQ97_18185 PF12704 MacB-like periplasmic core domain MNQ97_18185 PF00005 ABC transporter MNQ97_18190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MNQ97_18195 PF00664 ABC transporter transmembrane region MNQ97_18195 PF00005 ABC transporter MNQ97_18195 PF03412 Peptidase C39 family MNQ97_18205 PF01323 DSBA-like thioredoxin domain MNQ97_18205 PF00085 Thioredoxin MNQ97_18225 PF00419 Fimbrial protein MNQ97_18235 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_18235 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_18240 PF00577 Outer membrane usher protein MNQ97_18240 PF13953 PapC C-terminal domain MNQ97_18240 PF13954 PapC N-terminal domain MNQ97_18245 PF00419 Fimbrial protein MNQ97_18250 PF00419 Fimbrial protein MNQ97_18265 PF05188 MutS domain II MNQ97_18265 PF05192 MutS domain III MNQ97_18265 PF05190 MutS family domain IV MNQ97_18265 PF00488 MutS domain V MNQ97_18265 PF01624 MutS domain I MNQ97_18270 PF00140 Sigma-70 factor, region 1.2 MNQ97_18270 PF04542 Sigma-70 region 2 MNQ97_18270 PF04539 Sigma-70 region 3 MNQ97_18270 PF04545 Sigma-70, region 4 MNQ97_18275 PF01476 LysM domain MNQ97_18275 PF01551 Peptidase family M23 MNQ97_18285 PF01975 Survival protein SurE MNQ97_18290 PF01142 tRNA pseudouridine synthase D (TruD) MNQ97_18295 PF02542 YgbB family MNQ97_18300 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MNQ97_18305 PF04977 Septum formation initiator MNQ97_18310 PF00497 Bacterial extracellular solute-binding proteins, family 3 MNQ97_18315 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_18320 PF00005 ABC transporter MNQ97_18325 PF12084 Protein of unknown function (DUF3561) MNQ97_18335 PF00009 Elongation factor Tu GTP binding domain MNQ97_18340 PF01507 Phosphoadenosine phosphosulfate reductase family MNQ97_18345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MNQ97_18345 PF14824 Sirohaem biosynthesis protein central MNQ97_18345 PF10414 Sirohaem synthase dimerisation region MNQ97_18350 PF04389 Peptidase family M28 MNQ97_18365 PF01507 Phosphoadenosine phosphosulfate reductase family MNQ97_18370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MNQ97_18370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MNQ97_18375 PF00258 Flavodoxin MNQ97_18375 PF00175 Oxidoreductase NAD-binding domain MNQ97_18375 PF00667 FAD binding domain MNQ97_18380 PF01242 6-pyruvoyl tetrahydropterin synthase MNQ97_18385 PF04055 Radical SAM superfamily MNQ97_18390 PF00080 Copper/zinc superoxide dismutase (SODC) MNQ97_18395 PF03952 Enolase, N-terminal domain MNQ97_18395 PF00113 Enolase, C-terminal TIM barrel domain MNQ97_18400 PF06418 CTP synthase N-terminus MNQ97_18400 PF00117 Glutamine amidotransferase class-I MNQ97_18405 PF03819 MazG nucleotide pyrophosphohydrolase domain MNQ97_18410 PF13291 ACT domain MNQ97_18410 PF04607 Region found in RelA / SpoT proteins MNQ97_18410 PF02824 TGS domain MNQ97_18415 PF01938 TRAM domain MNQ97_18415 PF05958 tRNA (Uracil-5-)-methyltransferase MNQ97_18420 PF01627 Hpt domain MNQ97_18420 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MNQ97_18420 PF00072 Response regulator receiver domain MNQ97_18420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_18420 PF00672 HAMP domain MNQ97_18420 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_18425 PF00595 PDZ domain MNQ97_18430 PF01966 HD domain MNQ97_18430 PF13286 Phosphohydrolase-associated domain MNQ97_18435 PF01048 Phosphorylase superfamily MNQ97_18440 PF01497 Periplasmic binding protein MNQ97_18445 PF03458 UPF0126 domain MNQ97_18450 PF01521 Iron-sulphur cluster biosynthesis MNQ97_18455 PF00654 Voltage gated chloride channel MNQ97_18460 PF00202 Aminotransferase class-III MNQ97_18470 PF01032 FecCD transport family MNQ97_18475 PF01497 Periplasmic binding protein MNQ97_18480 PF00005 ABC transporter MNQ97_18485 PF00905 Penicillin binding protein transpeptidase domain MNQ97_18485 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal MNQ97_18485 PF00912 Transglycosylase MNQ97_18485 PF14814 Bifunctional transglycosylase second domain MNQ97_18495 PF02834 LigT like Phosphoesterase MNQ97_18500 PF03749 Sugar fermentation stimulation protein RE domain MNQ97_18500 PF17746 SfsA N-terminal OB domain MNQ97_18505 PF01258 Prokaryotic dksA/traR C4-type zinc finger MNQ97_18510 PF00749 tRNA synthetases class I (E and Q), catalytic domain MNQ97_18515 PF01743 Poly A polymerase head domain MNQ97_18515 PF12626 Polymerase A arginine-rich C-terminus MNQ97_18515 PF12627 Probable RNA and SrmB- binding site of polymerase A MNQ97_18520 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MNQ97_18525 PF02548 Ketopantoate hydroxymethyltransferase MNQ97_18530 PF02569 Pantoate-beta-alanine ligase MNQ97_18535 PF12468 Type III secretion system leucine rich repeat protein MNQ97_18535 PF14496 C-terminal novel E3 ligase, LRR-interacting MNQ97_18540 PF02261 Aspartate decarboxylase MNQ97_18545 PF01522 Polysaccharide deacetylase MNQ97_18550 PF01061 ABC-2 type transporter MNQ97_18555 PF00005 ABC transporter MNQ97_18560 PF00484 Carbonic anhydrase MNQ97_18565 PF00156 Phosphoribosyl transferase domain MNQ97_18570 PF00394 Multicopper oxidase MNQ97_18570 PF07731 Multicopper oxidase MNQ97_18570 PF10518 TAT (twin-arginine translocation) pathway signal sequence MNQ97_18570 PF07732 Multicopper oxidase MNQ97_18575 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) MNQ97_18580 PF17284 Spermidine synthase tetramerisation domain MNQ97_18585 PF02675 S-adenosylmethionine decarboxylase MNQ97_18590 PF00892 EamA-like transporter family MNQ97_18595 PF06062 Uncharacterised protein family (UPF0231) MNQ97_18600 PF00330 Aconitase family (aconitate hydratase) MNQ97_18600 PF06434 Aconitate hydratase 2 N-terminus MNQ97_18600 PF11791 Aconitate B N-terminal domain MNQ97_18605 PF07715 TonB-dependent Receptor Plug Domain MNQ97_18605 PF00593 TonB dependent receptor MNQ97_18615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MNQ97_18615 PF07992 Pyridine nucleotide-disulphide oxidoreductase MNQ97_18620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MNQ97_18620 PF00364 Biotin-requiring enzyme MNQ97_18620 PF02817 e3 binding domain MNQ97_18625 PF17831 Pyruvate dehydrogenase E1 component middle domain MNQ97_18625 PF00456 Transketolase, thiamine diphosphate binding domain MNQ97_18630 PF07729 FCD domain MNQ97_18630 PF00392 Bacterial regulatory proteins, gntR family MNQ97_18635 PF00324 Amino acid permease MNQ97_18640 PF17113 Regulatory signalling modulator protein AmpE MNQ97_18645 PF01510 N-acetylmuramoyl-L-alanine amidase MNQ97_18650 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain MNQ97_18650 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain MNQ97_18655 PF07963 Prokaryotic N-terminal methylation motif MNQ97_18660 PF00437 Type II/IV secretion system protein MNQ97_18660 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MNQ97_18665 PF00482 Type II secretion system (T2SS), protein F MNQ97_18670 PF00478 IMP dehydrogenase / GMP reductase domain MNQ97_18675 PF01121 Dephospho-CoA kinase MNQ97_18680 PF07072 Cell division protein MNQ97_18685 PF03884 DNA gyrase inhibitor YacG MNQ97_18690 PF00293 NUDIX domain MNQ97_18695 PF01043 SecA preprotein cross-linking domain MNQ97_18695 PF07517 SecA DEAD-like domain MNQ97_18695 PF07516 SecA Wing and Scaffold domain MNQ97_18695 PF02810 SEC-C motif MNQ97_18700 PF06558 Secretion monitor precursor protein (SecM) MNQ97_18710 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MNQ97_18715 PF12327 FtsZ family, C-terminal domain MNQ97_18715 PF00091 Tubulin/FtsZ family, GTPase domain MNQ97_18720 PF02491 SHS2 domain inserted in FTSA MNQ97_18725 PF03799 Cell division protein FtsQ MNQ97_18725 PF08478 POTRA domain, FtsQ-type MNQ97_18730 PF07478 D-ala D-ala ligase C-terminus MNQ97_18730 PF01820 D-ala D-ala ligase N-terminus MNQ97_18735 PF08245 Mur ligase middle domain MNQ97_18735 PF01225 Mur ligase family, catalytic domain MNQ97_18735 PF02875 Mur ligase family, glutamate ligase domain MNQ97_18740 PF04101 Glycosyltransferase family 28 C-terminal domain MNQ97_18740 PF03033 Glycosyltransferase family 28 N-terminal domain MNQ97_18745 PF01098 Cell cycle protein MNQ97_18750 PF02875 Mur ligase family, glutamate ligase domain MNQ97_18750 PF08245 Mur ligase middle domain MNQ97_18755 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MNQ97_18755 PF00953 Glycosyl transferase family 4 MNQ97_18760 PF01225 Mur ligase family, catalytic domain MNQ97_18760 PF02875 Mur ligase family, glutamate ligase domain MNQ97_18760 PF08245 Mur ligase middle domain MNQ97_18765 PF01225 Mur ligase family, catalytic domain MNQ97_18765 PF02875 Mur ligase family, glutamate ligase domain MNQ97_18765 PF08245 Mur ligase middle domain MNQ97_18770 PF03717 Penicillin-binding Protein dimerisation domain MNQ97_18770 PF00905 Penicillin binding protein transpeptidase domain MNQ97_18775 PF04999 Cell division protein FtsL MNQ97_18780 PF01795 MraW methylase family MNQ97_18785 PF02381 MraZ protein, putative antitoxin-like MNQ97_18790 PF06610 L-alanine exporter MNQ97_18795 PF00356 Bacterial regulatory proteins, lacI family MNQ97_18795 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MNQ97_18800 PF10369 Small subunit of acetolactate synthase MNQ97_18805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MNQ97_18805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MNQ97_18805 PF00205 Thiamine pyrophosphate enzyme, central domain MNQ97_18810 PF00501 AMP-binding enzyme MNQ97_18815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_18815 PF03466 LysR substrate binding domain MNQ97_18820 PF00682 HMGL-like MNQ97_18820 PF08502 LeuA allosteric (dimerisation) domain MNQ97_18825 PF00180 Isocitrate/isopropylmalate dehydrogenase MNQ97_18830 PF00330 Aconitase family (aconitate hydratase) MNQ97_18835 PF00694 Aconitase C-terminal domain MNQ97_18845 PF01212 Beta-eliminating lyase MNQ97_18850 PF03222 Tryptophan/tyrosine permease family MNQ97_18855 PF07690 Major Facilitator Superfamily MNQ97_18860 PF01228 Glycine radical MNQ97_18860 PF02901 Pyruvate formate lyase-like MNQ97_18865 PF04055 Radical SAM superfamily MNQ97_18870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MNQ97_18870 PF12793 Sugar transport-related sRNA regulator N-term MNQ97_18880 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_18885 PF00005 ABC transporter MNQ97_18890 PF09335 SNARE associated Golgi protein MNQ97_18895 PF03104 DNA polymerase family B, exonuclease domain MNQ97_18895 PF00136 DNA polymerase family B MNQ97_18900 PF00271 Helicase conserved C-terminal domain MNQ97_18900 PF12137 RNA polymerase recycling family C-terminal MNQ97_18900 PF00176 SNF2 family N-terminal domain MNQ97_18900 PF18339 RapA N-terminal Tudor like domain 1 MNQ97_18900 PF18337 RapA N-terminal Tudor like domain MNQ97_18905 PF00849 RNA pseudouridylate synthase MNQ97_18910 PF00226 DnaJ domain MNQ97_18910 PF05099 Tellurite resistance protein TerB MNQ97_18915 PF04453 LPS transport system D MNQ97_18915 PF03968 OstA-like protein MNQ97_18920 PF00639 PPIC-type PPIASE domain MNQ97_18920 PF09312 SurA N-terminal domain MNQ97_18925 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MNQ97_18930 PF00398 Ribosomal RNA adenine dimethylase MNQ97_18935 PF04379 ApaG domain MNQ97_18940 PF00149 Calcineurin-like phosphoesterase MNQ97_18945 PF00186 Dihydrofolate reductase MNQ97_18950 PF12821 Threonine/Serine exporter, ThrE MNQ97_18955 PF06738 Putative threonine/serine exporter MNQ97_18960 PF01810 LysE type translocator MNQ97_18965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MNQ97_18965 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MNQ97_18965 PF02142 MGS-like domain MNQ97_18970 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MNQ97_18970 PF00117 Glutamine amidotransferase class-I MNQ97_18975 PF05173 Dihydrodipicolinate reductase, C-terminus MNQ97_18975 PF01113 Dihydrodipicolinate reductase, N-terminus MNQ97_18980 PF02401 LytB protein MNQ97_18985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MNQ97_18990 PF01252 Signal peptidase (SPase) II MNQ97_18995 PF08264 Anticodon-binding domain of tRNA MNQ97_18995 PF06827 Zinc finger found in FPG and IleRS MNQ97_18995 PF00133 tRNA synthetases class I (I, L, M and V) MNQ97_19000 PF06574 FAD synthetase MNQ97_19000 PF01687 Riboflavin kinase MNQ97_19005 PF01649 Ribosomal protein S20 MNQ97_19010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_19010 PF03466 LysR substrate binding domain MNQ97_19015 PF06965 Na+/H+ antiporter 1 MNQ97_19020 PF00226 DnaJ domain MNQ97_19020 PF01556 DnaJ C terminal domain MNQ97_19020 PF00684 DnaJ central domain MNQ97_19025 PF00012 Hsp70 protein MNQ97_19030 PF01184 GPR1/FUN34/yaaH family MNQ97_19040 PF07690 Major Facilitator Superfamily MNQ97_19045 PF00994 Probable molybdopterin binding domain MNQ97_19050 PF00923 Transaldolase/Fructose-6-phosphate aldolase MNQ97_19055 PF03883 Peroxide stress protein YaaA MNQ97_19060 PF00291 Pyridoxal-phosphate dependent enzyme MNQ97_19060 PF14821 Threonine synthase N terminus MNQ97_19065 PF08544 GHMP kinases C terminal MNQ97_19065 PF00288 GHMP kinases N terminal domain MNQ97_19070 PF03447 Homoserine dehydrogenase, NAD binding domain MNQ97_19070 PF00742 Homoserine dehydrogenase MNQ97_19070 PF00696 Amino acid kinase family MNQ97_19070 PF01842 ACT domain MNQ97_19070 PF13840 ACT domain MNQ97_19075 PF08254 Threonine leader peptide MNQ97_19085 PF00072 Response regulator receiver domain MNQ97_19085 PF00486 Transcriptional regulatory protein, C terminal MNQ97_19090 PF05981 CreA protein MNQ97_19095 PF12833 Helix-turn-helix domain MNQ97_19095 PF06445 GyrI-like small molecule binding domain MNQ97_19100 PF00300 Histidine phosphatase superfamily (branch 1) MNQ97_19105 PF01931 Protein of unknown function DUF84 MNQ97_19110 PF01371 Trp repressor protein MNQ97_19115 PF01464 Transglycosylase SLT domain MNQ97_19115 PF14718 Soluble lytic murein transglycosylase L domain MNQ97_19120 PF00689 Cation transporting ATPase, C-terminus MNQ97_19120 PF00690 Cation transporter/ATPase, N-terminus MNQ97_19125 PF13689 YfiR/HmsC-like MNQ97_19130 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_19130 PF17152 Periplasmic sensor domain MNQ97_19135 PF00691 OmpA family MNQ97_19140 PF00005 ABC transporter MNQ97_19140 PF12848 ABC transporter MNQ97_19155 PF05336 L-rhamnose mutarotase MNQ97_19160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_19160 PF03466 LysR substrate binding domain MNQ97_19165 PF00107 Zinc-binding dehydrogenase MNQ97_19165 PF08240 Alcohol dehydrogenase GroES-like domain MNQ97_19170 PF13521 AAA domain MNQ97_19170 PF01381 Helix-turn-helix MNQ97_19175 PF18073 Rubredoxin metal binding domain MNQ97_19180 PF18429 Domain of unknown function (DUF5609) MNQ97_19185 PF10144 Bacterial virulence factor haemolysin MNQ97_19190 PF07804 HipA-like C-terminal domain MNQ97_19195 PF01048 Phosphorylase superfamily MNQ97_19200 PF01676 Metalloenzyme superfamily MNQ97_19205 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain MNQ97_19205 PF00591 Glycosyl transferase family, a/b domain MNQ97_19205 PF02885 Glycosyl transferase family, helical bundle domain MNQ97_19210 PF01791 DeoC/LacD family aldolase MNQ97_19215 PF01773 Na+ dependent nucleoside transporter N-terminus MNQ97_19215 PF07662 Na+ dependent nucleoside transporter C-terminus MNQ97_19215 PF07670 Nucleoside recognition MNQ97_19220 PF01026 TatD related DNase MNQ97_19225 PF01734 Patatin-like phospholipase MNQ97_19230 PF07043 Protein of unknown function (DUF1328) MNQ97_19235 PF04972 BON domain MNQ97_19240 PF16658 Class II release factor RF3, C-terminal domain MNQ97_19240 PF03144 Elongation factor Tu domain 2 MNQ97_19240 PF00009 Elongation factor Tu GTP binding domain MNQ97_19245 PF00583 Acetyltransferase (GNAT) family MNQ97_19250 PF03603 DNA polymerase III psi subunit MNQ97_19255 PF08468 Methyltransferase small domain N-terminal MNQ97_19255 PF05175 Methyltransferase small domain MNQ97_19260 PF00248 Aldo/keto reductase family MNQ97_19265 PF03466 LysR substrate binding domain MNQ97_19265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_19285 PF07256 Protein of unknown function (DUF1435) MNQ97_19290 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_19295 PF00294 pfkB family carbohydrate kinase MNQ97_19300 PF11471 Maltoporin periplasmic N-terminal extension MNQ97_19300 PF02264 LamB porin MNQ97_19305 PF02378 Phosphotransferase system, EIIC MNQ97_19305 PF00367 phosphotransferase system, EIIB MNQ97_19310 PF00251 Glycosyl hydrolases family 32 N-terminal domain MNQ97_19310 PF08244 Glycosyl hydrolases family 32 C terminal MNQ97_19315 PF13407 Periplasmic binding protein domain MNQ97_19315 PF00356 Bacterial regulatory proteins, lacI family MNQ97_19320 PF00989 PAS fold MNQ97_19320 PF02954 Bacterial regulatory protein, Fis family MNQ97_19320 PF00158 Sigma-54 interaction domain MNQ97_19325 PF01095 Pectinesterase MNQ97_19350 PF16861 Carbamoyltransferase C-terminus MNQ97_19350 PF02543 Carbamoyltransferase N-terminus MNQ97_19360 PF03610 PTS system fructose IIA component MNQ97_19360 PF05524 PEP-utilising enzyme, N-terminal MNQ97_19360 PF00381 PTS HPr component phosphorylation site MNQ97_19360 PF00391 PEP-utilising enzyme, mobile domain MNQ97_19365 PF02734 DAK2 domain MNQ97_19370 PF02733 Dak1 domain MNQ97_19375 PF00465 Iron-containing alcohol dehydrogenase MNQ97_19380 PF00873 AcrB/AcrD/AcrF family MNQ97_19385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MNQ97_19395 PF13520 Amino acid permease MNQ97_19405 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MNQ97_19410 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MNQ97_19410 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MNQ97_19415 PF00325 Bacterial regulatory proteins, crp family MNQ97_19415 PF04198 Putative sugar-binding domain MNQ97_19420 PF00005 ABC transporter MNQ97_19425 PF02653 Branched-chain amino acid transport system / permease component MNQ97_19430 PF02653 Branched-chain amino acid transport system / permease component MNQ97_19435 PF13407 Periplasmic binding protein domain MNQ97_19440 PF01791 DeoC/LacD family aldolase MNQ97_19445 PF03992 Antibiotic biosynthesis monooxygenase MNQ97_19450 PF08521 Two-component sensor kinase N-terminal MNQ97_19450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_19450 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_19455 PF00072 Response regulator receiver domain MNQ97_19455 PF00486 Transcriptional regulatory protein, C terminal MNQ97_19470 PF01970 Tripartite tricarboxylate transporter TctA family MNQ97_19475 PF08349 Protein of unknown function (DUF1722) MNQ97_19480 PF10696 Protein of unknown function (DUF2501) MNQ97_19485 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase MNQ97_19500 PF00583 Acetyltransferase (GNAT) family MNQ97_19505 PF17287 POTRA domain MNQ97_19505 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB MNQ97_19505 PF08479 POTRA domain, ShlB-type MNQ97_19510 PF13332 Hemagglutinin repeat MNQ97_19510 PF13018 Extended Signal Peptide of Type V secretion system MNQ97_19510 PF04829 Pre-toxin domain with VENN motif MNQ97_19510 PF05860 haemagglutination activity domain MNQ97_19515 PF18228 CdiI N-terminal domain MNQ97_19540 PF05860 haemagglutination activity domain MNQ97_19540 PF13332 Hemagglutinin repeat MNQ97_19540 PF05594 Haemagluttinin repeat MNQ97_19540 PF04829 Pre-toxin domain with VENN motif MNQ97_19555 PF13610 DDE domain MNQ97_19575 PF01548 Transposase MNQ97_19575 PF02371 Transposase IS116/IS110/IS902 family MNQ97_19605 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A MNQ97_19610 PF06755 CbtA_toxin of type IV toxin-antitoxin system MNQ97_19620 PF04002 RadC-like JAB domain MNQ97_19625 PF03230 Antirestriction protein MNQ97_19630 PF06067 Domain of unknown function (DUF932) MNQ97_19645 PF01926 50S ribosome-binding GTPase MNQ97_19670 PF08479 POTRA domain, ShlB-type MNQ97_19670 PF17287 POTRA domain MNQ97_19670 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB MNQ97_19675 PF13332 Hemagglutinin repeat MNQ97_19675 PF05860 haemagglutination activity domain MNQ97_19675 PF04829 Pre-toxin domain with VENN motif MNQ97_19730 PF12008 Type I restriction and modification enzyme - subunit R C terminal MNQ97_19730 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) MNQ97_19730 PF18766 SWI2/SNF2 ATPase MNQ97_19740 PF12161 HsdM N-terminal domain MNQ97_19740 PF02384 N-6 DNA Methylase MNQ97_19755 PF13356 Arm DNA-binding domain MNQ97_19755 PF00589 Phage integrase family MNQ97_19765 PF03739 Lipopolysaccharide export system permease LptF/LptG MNQ97_19770 PF03739 Lipopolysaccharide export system permease LptF/LptG MNQ97_19775 PF02789 Cytosol aminopeptidase family, N-terminal domain MNQ97_19775 PF00883 Cytosol aminopeptidase family, catalytic domain MNQ97_19780 PF04364 DNA polymerase III chi subunit, HolC MNQ97_19785 PF10458 Valyl tRNA synthetase tRNA binding arm MNQ97_19785 PF00133 tRNA synthetases class I (I, L, M and V) MNQ97_19785 PF08264 Anticodon-binding domain of tRNA MNQ97_19790 PF00583 Acetyltransferase (GNAT) family MNQ97_19795 PF06877 Regulator of ribonuclease activity B MNQ97_19800 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MNQ97_19800 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MNQ97_19805 PF04074 YhcH/YjgK/YiaL MNQ97_19815 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_19820 PF12911 N-terminal TM domain of oligopeptide transport permease C MNQ97_19820 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_19825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MNQ97_19825 PF00005 ABC transporter MNQ97_19830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MNQ97_19830 PF00005 ABC transporter MNQ97_19840 PF02525 Flavodoxin-like fold MNQ97_19845 PF03466 LysR substrate binding domain MNQ97_19845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_19850 PF13597 Anaerobic ribonucleoside-triphosphate reductase MNQ97_19850 PF03477 ATP cone domain MNQ97_19860 PF07702 UTRA domain MNQ97_19860 PF00392 Bacterial regulatory proteins, gntR family MNQ97_19865 PF06754 Phosphonate metabolism protein PhnG MNQ97_19870 PF05845 Bacterial phosphonate metabolism protein (PhnH) MNQ97_19875 PF05861 Bacterial phosphonate metabolism protein (PhnI) MNQ97_19880 PF06007 Phosphonate metabolism protein PhnJ MNQ97_19885 PF00005 ABC transporter MNQ97_19890 PF00005 ABC transporter MNQ97_19895 PF07969 Amidohydrolase family MNQ97_19905 PF12706 Beta-lactamase superfamily domain MNQ97_19910 PF13460 NAD(P)H-binding MNQ97_19930 PF03797 Autotransporter beta-domain MNQ97_19930 PF16168 Adhesin of bacterial autotransporter system, probable stalk MNQ97_19930 PF13018 Extended Signal Peptide of Type V secretion system MNQ97_19930 PF03212 Pertactin MNQ97_19940 PF00005 ABC transporter MNQ97_19940 PF17912 MalK OB fold domain MNQ97_19940 PF03459 TOBE domain MNQ97_19945 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_19950 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_19955 PF13416 Bacterial extracellular solute-binding protein MNQ97_19975 PF01276 Orn/Lys/Arg decarboxylase, major domain MNQ97_19975 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain MNQ97_19975 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain MNQ97_19980 PF13520 Amino acid permease MNQ97_19985 PF01541 GIY-YIG catalytic domain MNQ97_19990 PF13508 Acetyltransferase (GNAT) domain MNQ97_19995 PF02036 SCP-2 sterol transfer family MNQ97_20000 PF01136 Peptidase family U32 MNQ97_20005 PF01136 Peptidase family U32 MNQ97_20010 PF00296 Luciferase-like monooxygenase MNQ97_20015 PF03880 DbpA RNA binding domain MNQ97_20015 PF00270 DEAD/DEAH box helicase MNQ97_20015 PF12343 Cold shock protein DEAD box A MNQ97_20015 PF00271 Helicase conserved C-terminal domain MNQ97_20020 PF07719 Tetratricopeptide repeat MNQ97_20020 PF13181 Tetratricopeptide repeat MNQ97_20025 PF00575 S1 RNA binding domain MNQ97_20025 PF03725 3' exoribonuclease family, domain 2 MNQ97_20025 PF01138 3' exoribonuclease family, domain 1 MNQ97_20025 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MNQ97_20025 PF00013 KH domain MNQ97_20030 PF00312 Ribosomal protein S15 MNQ97_20035 PF09157 Pseudouridine synthase II TruB, C-terminal MNQ97_20035 PF16198 tRNA pseudouridylate synthase B C-terminal domain MNQ97_20035 PF01509 TruB family pseudouridylate synthase (N terminal domain) MNQ97_20040 PF02033 Ribosome-binding factor A MNQ97_20045 PF00009 Elongation factor Tu GTP binding domain MNQ97_20045 PF03144 Elongation factor Tu domain 2 MNQ97_20045 PF11987 Translation-initiation factor 2 MNQ97_20045 PF08364 Bacterial translation initiation factor IF-2 associated region MNQ97_20045 PF04760 Translation initiation factor IF-2, N-terminal region MNQ97_20050 PF13184 NusA-like KH domain MNQ97_20050 PF08529 NusA N-terminal domain MNQ97_20050 PF00575 S1 RNA binding domain MNQ97_20055 PF17384 RimP C-terminal SH3 domain MNQ97_20055 PF02576 RimP N-terminal domain MNQ97_20070 PF03840 Preprotein translocase SecG subunit MNQ97_20075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MNQ97_20075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MNQ97_20075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MNQ97_20075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MNQ97_20080 PF00809 Pterin binding enzyme MNQ97_20085 PF00004 ATPase family associated with various cellular activities (AAA) MNQ97_20085 PF17862 AAA+ lid domain MNQ97_20085 PF06480 FtsH Extracellular MNQ97_20085 PF01434 Peptidase family M41 MNQ97_20090 PF01728 FtsJ-like methyltransferase MNQ97_20095 PF01985 CRS1 / YhbY (CRM) domain MNQ97_20100 PF03449 Transcription elongation factor, N-terminal MNQ97_20100 PF01272 Transcription elongation factor, GreA/GreB, C-term MNQ97_20105 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family MNQ97_20110 PF00486 Transcriptional regulatory protein, C terminal MNQ97_20110 PF00072 Response regulator receiver domain MNQ97_20115 PF00672 HAMP domain MNQ97_20115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_20115 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_20120 PF01018 GTP1/OBG MNQ97_20120 PF01926 50S ribosome-binding GTPase MNQ97_20125 PF00892 EamA-like transporter family MNQ97_20130 PF01016 Ribosomal L27 protein MNQ97_20135 PF00829 Ribosomal prokaryotic L21 protein MNQ97_20140 PF00348 Polyprenyl synthetase MNQ97_20155 PF13693 Winged helix-turn-helix DNA-binding MNQ97_20160 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MNQ97_20160 PF00056 lactate/malate dehydrogenase, NAD binding domain MNQ97_20165 PF01316 Arginine repressor, DNA binding domain MNQ97_20165 PF02863 Arginine repressor, C-terminal domain MNQ97_20180 PF01225 Mur ligase family, catalytic domain MNQ97_20180 PF02875 Mur ligase family, glutamate ligase domain MNQ97_20180 PF08245 Mur ligase middle domain MNQ97_20185 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MNQ97_20190 PF00719 Inorganic pyrophosphatase MNQ97_20195 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like MNQ97_20200 PF04357 TamB, inner membrane protein subunit of TAM complex MNQ97_20205 PF01103 Surface antigen MNQ97_20205 PF07244 Surface antigen variable number repeat MNQ97_20205 PF17243 POTRA domain TamA domain 1 MNQ97_20210 PF01625 Peptide methionine sulfoxide reductase MNQ97_20215 PF03471 Transporter associated domain MNQ97_20215 PF00571 CBS domain MNQ97_20215 PF01595 Cyclin M transmembrane N-terminal domain MNQ97_20220 PF06526 Protein of unknown function (DUF1107) MNQ97_20225 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) MNQ97_20230 PF00459 Inositol monophosphatase family MNQ97_20235 PF02872 5'-nucleotidase, C-terminal domain MNQ97_20235 PF00149 Calcineurin-like phosphoesterase MNQ97_20240 PF01814 Hemerythrin HHE cation binding domain MNQ97_20240 PF04405 Domain of Unknown function (DUF542) MNQ97_20245 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MNQ97_20245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MNQ97_20250 PF04225 Opacity-associated protein A LysM-like domain MNQ97_20250 PF08525 Opacity-associated protein A N-terminal motif MNQ97_20260 PF03948 Ribosomal protein L9, C-terminal domain MNQ97_20260 PF01281 Ribosomal protein L9, N-terminal domain MNQ97_20265 PF01084 Ribosomal protein S18 MNQ97_20270 PF00436 Single-strand binding protein family MNQ97_20275 PF01250 Ribosomal protein S6 MNQ97_20280 PF07338 Protein of unknown function (DUF1471) MNQ97_20285 PF00326 Prolyl oligopeptidase family MNQ97_20290 PF07338 Protein of unknown function (DUF1471) MNQ97_20295 PF02770 Acyl-CoA dehydrogenase, middle domain MNQ97_20295 PF18158 Adaptive response protein AidB N-terminal domain MNQ97_20295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MNQ97_20300 PF00588 SpoU rRNA Methylase family MNQ97_20300 PF08032 RNA 2'-O ribose methyltransferase substrate binding MNQ97_20305 PF17876 Cold shock domain MNQ97_20305 PF08461 Ribonuclease R winged-helix domain MNQ97_20305 PF08206 Ribonuclease B OB domain MNQ97_20305 PF00773 RNB domain MNQ97_20305 PF00575 S1 RNA binding domain MNQ97_20310 PF02082 Transcriptional regulator MNQ97_20315 PF00709 Adenylosuccinate synthetase MNQ97_20320 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) MNQ97_20325 PF01145 SPFH domain / Band 7 family MNQ97_20330 PF12221 Bacterial membrane protein N terminal MNQ97_20330 PF01145 SPFH domain / Band 7 family MNQ97_20335 PF16360 GTP-binding GTPase Middle Region MNQ97_20335 PF13167 GTP-binding GTPase N-terminal MNQ97_20335 PF01926 50S ribosome-binding GTPase MNQ97_20340 PF17209 Hfq protein MNQ97_20350 PF01119 DNA mismatch repair protein, C-terminal domain MNQ97_20350 PF08676 MutL C terminal dimerisation domain MNQ97_20355 PF01520 N-acetylmuramoyl-L-alanine amidase MNQ97_20360 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MNQ97_20365 PF03853 YjeF-related protein N-terminus MNQ97_20365 PF01256 Carbohydrate kinase MNQ97_20370 PF08331 Domain of unknown function (DUF1730) MNQ97_20390 PF00929 Exonuclease MNQ97_20395 PF03193 RsgA GTPase MNQ97_20400 PF02666 Phosphatidylserine decarboxylase MNQ97_20405 PF12794 Mechanosensitive ion channel inner membrane domain 1 MNQ97_20405 PF12795 Mechanosensitive ion channel porin domain MNQ97_20405 PF00924 Mechanosensitive ion channel MNQ97_20410 PF00152 tRNA synthetases class II (D, K and N) MNQ97_20415 PF00890 FAD binding domain MNQ97_20415 PF02910 Fumarate reductase flavoprotein C-term MNQ97_20420 PF13183 4Fe-4S dicluster domain MNQ97_20420 PF13085 2Fe-2S iron-sulfur cluster binding domain MNQ97_20425 PF02300 Fumarate reductase subunit C MNQ97_20430 PF02313 Fumarate reductase subunit D MNQ97_20435 PF08212 Lipocalin-like domain MNQ97_20440 PF00893 Small Multidrug Resistance protein MNQ97_20445 PF08085 Entericidin EcnA/B family MNQ97_20450 PF01132 Elongation factor P (EF-P) OB domain MNQ97_20450 PF08207 Elongation factor P (EF-P) KOW-like domain MNQ97_20450 PF09285 Elongation factor P, C-terminal MNQ97_20455 PF04055 Radical SAM superfamily MNQ97_20460 PF13698 Domain of unknown function (DUF4156) MNQ97_20465 PF00118 TCP-1/cpn60 chaperonin family MNQ97_20470 PF00166 Chaperonin 10 Kd subunit MNQ97_20475 PF04186 FxsA cytoplasmic membrane protein MNQ97_20480 PF10415 Fumarase C C-terminus MNQ97_20480 PF00206 Lyase MNQ97_20485 PF03605 Anaerobic c4-dicarboxylate membrane transporter MNQ97_20490 PF03091 CutA1 divalent ion tolerance protein MNQ97_20495 PF02683 Cytochrome C biogenesis protein transmembrane region MNQ97_20495 PF11412 Disulphide bond corrector protein DsbC MNQ97_20500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MNQ97_20500 PF00384 Molybdopterin oxidoreductase MNQ97_20500 PF01568 Molydopterin dinucleotide binding domain MNQ97_20505 PF13247 4Fe-4S dicluster domain MNQ97_20505 PF12800 4Fe-4S binding domain MNQ97_20510 PF13247 4Fe-4S dicluster domain MNQ97_20510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MNQ97_20510 PF07992 Pyridine nucleotide-disulphide oxidoreductase MNQ97_20515 PF07690 Major Facilitator Superfamily MNQ97_20520 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus MNQ97_20520 PF08666 SAF domain MNQ97_20525 PF13556 PucR C-terminal helix-turn-helix domain MNQ97_20525 PF17853 GGDEF-like domain MNQ97_20525 PF05651 Putative sugar diacid recognition MNQ97_20530 PF02595 Glycerate kinase family MNQ97_20535 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MNQ97_20535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MNQ97_20540 PF03328 HpcH/HpaI aldolase/citrate lyase family MNQ97_20555 PF07075 Protein of unknown function (DUF1343) MNQ97_20565 PF00933 Glycosyl hydrolase family 3 N terminal domain MNQ97_20565 PF01915 Glycosyl hydrolase family 3 C-terminal domain MNQ97_20570 PF01418 Helix-turn-helix domain, rpiR family MNQ97_20570 PF01380 SIS domain MNQ97_20575 PF13580 SIS domain MNQ97_20580 PF00367 phosphotransferase system, EIIB MNQ97_20580 PF02378 Phosphotransferase system, EIIC MNQ97_20590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MNQ97_20590 PF02203 Tar ligand binding domain homologue MNQ97_20590 PF00672 HAMP domain MNQ97_20595 PF02901 Pyruvate formate lyase-like MNQ97_20595 PF01228 Glycine radical MNQ97_20600 PF00871 Acetokinase family MNQ97_20605 PF01490 Transmembrane amino acid transporter protein MNQ97_20610 PF00291 Pyridoxal-phosphate dependent enzyme MNQ97_20615 PF16326 ABC transporter C-terminal domain MNQ97_20615 PF12848 ABC transporter MNQ97_20615 PF00005 ABC transporter MNQ97_20620 PF10636 Hemin uptake protein hemP MNQ97_20625 PF00593 TonB dependent receptor MNQ97_20625 PF07715 TonB-dependent Receptor Plug Domain MNQ97_20630 PF05171 Haemin-degrading HemS.ChuX domain MNQ97_20635 PF01497 Periplasmic binding protein MNQ97_20640 PF01032 FecCD transport family MNQ97_20645 PF00005 ABC transporter MNQ97_20650 PF00392 Bacterial regulatory proteins, gntR family MNQ97_20650 PF00155 Aminotransferase class I and II MNQ97_20660 PF07715 TonB-dependent Receptor Plug Domain MNQ97_20660 PF00593 TonB dependent receptor MNQ97_20665 PF12794 Mechanosensitive ion channel inner membrane domain 1 MNQ97_20665 PF12795 Mechanosensitive ion channel porin domain MNQ97_20665 PF00924 Mechanosensitive ion channel MNQ97_20675 PF01312 FlhB HrpN YscU SpaS Family MNQ97_20680 PF01311 Bacterial export proteins, family 1 MNQ97_20685 PF01313 Bacterial export proteins, family 3 MNQ97_20690 PF00813 FliP family MNQ97_20710 PF18269 T3SS EscN ATPase C-terminal domain MNQ97_20710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MNQ97_20715 PF00771 FHIPEP family MNQ97_20725 PF07201 HrpJ-like domain MNQ97_20740 PF01514 Secretory protein of YscJ/FliF family MNQ97_20760 PF12833 Helix-turn-helix domain MNQ97_20760 PF14525 AraC-binding-like domain MNQ97_20795 PF03433 EspA-like secreted protein MNQ97_20815 PF00263 Bacterial type II and III secretion system protein MNQ97_20815 PF03958 Bacterial type II/III secretion system short domain MNQ97_20830 PF00672 HAMP domain MNQ97_20830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_20830 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_20830 PF00072 Response regulator receiver domain MNQ97_20830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MNQ97_20830 PF01627 Hpt domain MNQ97_20835 PF00196 Bacterial regulatory proteins, luxR family MNQ97_20835 PF00072 Response regulator receiver domain MNQ97_20840 PF00375 Sodium:dicarboxylate symporter family MNQ97_20845 PF16177 Acetyl-coenzyme A synthetase N-terminus MNQ97_20845 PF00501 AMP-binding enzyme MNQ97_20845 PF13193 AMP-binding enzyme C-terminal domain MNQ97_20850 PF04341 Protein of unknown function, DUF485 MNQ97_20855 PF00474 Sodium:solute symporter family MNQ97_20890 PF01808 AICARFT/IMPCHase bienzyme MNQ97_20890 PF02142 MGS-like domain MNQ97_20895 PF02843 Phosphoribosylglycinamide synthetase, C domain MNQ97_20895 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MNQ97_20895 PF02844 Phosphoribosylglycinamide synthetase, N domain MNQ97_20900 PF07356 Protein of unknown function (DUF1481) MNQ97_20905 PF00216 Bacterial DNA-binding protein MNQ97_20910 PF04222 Protein of unknown function (DUF416) MNQ97_20915 PF04493 Endonuclease V MNQ97_20920 PF01208 Uroporphyrinogen decarboxylase (URO-D) MNQ97_20925 PF09297 NADH pyrophosphatase zinc ribbon domain MNQ97_20925 PF00293 NUDIX domain MNQ97_20930 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ MNQ97_20935 PF13667 ThiC-associated domain MNQ97_20935 PF01964 Radical SAM ThiC family MNQ97_20940 PF02581 Thiamine monophosphate synthase MNQ97_20945 PF00899 ThiF family MNQ97_20950 PF02597 ThiS family MNQ97_20955 PF05690 Thiazole biosynthesis protein ThiG MNQ97_20960 PF04055 Radical SAM superfamily MNQ97_20960 PF06968 Biotin and Thiamin Synthesis associated domain MNQ97_20965 PF04998 RNA polymerase Rpb1, domain 5 MNQ97_20965 PF04997 RNA polymerase Rpb1, domain 1 MNQ97_20965 PF00623 RNA polymerase Rpb1, domain 2 MNQ97_20965 PF04983 RNA polymerase Rpb1, domain 3 MNQ97_20965 PF05000 RNA polymerase Rpb1, domain 4 MNQ97_20970 PF04560 RNA polymerase Rpb2, domain 7 MNQ97_20970 PF00562 RNA polymerase Rpb2, domain 6 MNQ97_20970 PF10385 RNA polymerase beta subunit external 1 domain MNQ97_20970 PF04565 RNA polymerase Rpb2, domain 3 MNQ97_20970 PF04561 RNA polymerase Rpb2, domain 2 MNQ97_20970 PF04563 RNA polymerase beta subunit MNQ97_20975 PF16320 Ribosomal protein L7/L12 dimerisation domain MNQ97_20975 PF00542 Ribosomal protein L7/L12 C-terminal domain MNQ97_20980 PF00466 Ribosomal protein L10 MNQ97_20985 PF00687 Ribosomal protein L1p/L10e family MNQ97_20990 PF00298 Ribosomal protein L11, RNA binding domain MNQ97_20990 PF03946 Ribosomal protein L11, N-terminal domain MNQ97_20995 PF02357 Transcription termination factor nusG MNQ97_20995 PF00467 KOW motif MNQ97_21000 PF00584 SecE/Sec61-gamma subunits of protein translocation complex MNQ97_21005 PF03144 Elongation factor Tu domain 2 MNQ97_21005 PF00009 Elongation factor Tu GTP binding domain MNQ97_21005 PF03143 Elongation factor Tu C-terminal domain MNQ97_21030 PF13673 Acetyltransferase (GNAT) domain MNQ97_21035 PF00485 Phosphoribulokinase / Uridine kinase family MNQ97_21040 PF03099 Biotin/lipoate A/B protein ligase family MNQ97_21040 PF02237 Biotin protein ligase C terminal domain MNQ97_21040 PF08279 HTH domain MNQ97_21045 PF01565 FAD binding domain MNQ97_21045 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MNQ97_21070 PF12724 Flavodoxin domain MNQ97_21075 PF02386 Cation transport protein MNQ97_21080 PF09186 Domain of unknown function (DUF1949) MNQ97_21080 PF01205 Uncharacterized protein family UPF0029 MNQ97_21085 PF00557 Metallopeptidase family M24 MNQ97_21090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MNQ97_21090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MNQ97_21090 PF00378 Enoyl-CoA hydratase/isomerase MNQ97_21095 PF02803 Thiolase, C-terminal domain MNQ97_21095 PF00108 Thiolase, N-terminal domain MNQ97_21100 PF00970 Oxidoreductase FAD-binding domain MNQ97_21100 PF00175 Oxidoreductase NAD-binding domain MNQ97_21105 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MNQ97_21110 PF02357 Transcription termination factor nusG MNQ97_21115 PF00490 Delta-aminolevulinic acid dehydratase MNQ97_21120 PF01026 TatD related DNase MNQ97_21125 PF00902 Sec-independent protein translocase protein (TatC) MNQ97_21135 PF02416 mttA/Hcf106 family MNQ97_21140 PF03109 ABC1 family MNQ97_21145 PF02036 SCP-2 sterol transfer family MNQ97_21150 PF01209 ubiE/COQ5 methyltransferase family MNQ97_21155 PF02646 RmuC family MNQ97_21160 PF09335 SNARE associated Golgi protein MNQ97_21165 PF13722 5TM C-terminal transporter carbon starvation CstA MNQ97_21165 PF02554 Carbon starvation protein CstA MNQ97_21175 PF01048 Phosphorylase superfamily MNQ97_21180 PF01738 Dienelactone hydrolase family MNQ97_21185 PF01717 Cobalamin-independent synthase, Catalytic domain MNQ97_21185 PF08267 Cobalamin-independent synthase, N-terminal domain MNQ97_21190 PF03466 LysR substrate binding domain MNQ97_21190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_21195 PF00892 EamA-like transporter family MNQ97_21200 PF03547 Membrane transport protein MNQ97_21205 PF03009 Glycerophosphoryl diester phosphodiesterase family MNQ97_21210 PF17912 MalK OB fold domain MNQ97_21210 PF00005 ABC transporter MNQ97_21215 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_21220 PF00528 Binding-protein-dependent transport system inner membrane component MNQ97_21225 PF13416 Bacterial extracellular solute-binding protein MNQ97_21260 PF00005 ABC transporter MNQ97_21265 PF12399 Branched-chain amino acid ATP-binding cassette transporter MNQ97_21265 PF00005 ABC transporter MNQ97_21270 PF02653 Branched-chain amino acid transport system / permease component MNQ97_21270 PF11862 Domain of unknown function (DUF3382) MNQ97_21275 PF02653 Branched-chain amino acid transport system / permease component MNQ97_21280 PF13458 Periplasmic binding protein MNQ97_21285 PF12568 Acetyltransferase (GNAT) domain, PanZ MNQ97_21290 PF00140 Sigma-70 factor, region 1.2 MNQ97_21290 PF04542 Sigma-70 region 2 MNQ97_21290 PF04545 Sigma-70, region 4 MNQ97_21295 PF02687 FtsX-like permease family MNQ97_21295 PF18075 FtsX extracellular domain MNQ97_21300 PF00005 ABC transporter MNQ97_21305 PF00448 SRP54-type protein, GTPase domain MNQ97_21305 PF02881 SRP54-type protein, helical bundle domain MNQ97_21315 PF06611 Protein of unknown function (DUF1145) MNQ97_21330 PF07947 YhhN family MNQ97_21335 PF00403 Heavy-metal-associated domain MNQ97_21340 PF01206 Sulfurtransferase TusA MNQ97_21345 PF02592 Putative vitamin uptake transporter MNQ97_21350 PF08786 DcrB MNQ97_21355 PF02754 Cysteine-rich domain MNQ97_21355 PF13183 4Fe-4S dicluster domain MNQ97_21360 PF00890 FAD binding domain MNQ97_21365 PF01266 FAD dependent oxidoreductase MNQ97_21365 PF04324 BFD-like [2Fe-2S] binding domain MNQ97_21375 PF07690 Major Facilitator Superfamily MNQ97_21380 PF03009 Glycerophosphoryl diester phosphodiesterase family MNQ97_21390 PF12146 Serine aminopeptidase, S33 MNQ97_21395 PF01810 LysE type translocator MNQ97_21400 PF01810 LysE type translocator MNQ97_21405 PF09382 RQC domain MNQ97_21405 PF00570 HRDC domain MNQ97_21405 PF00271 Helicase conserved C-terminal domain MNQ97_21405 PF00270 DEAD/DEAH box helicase MNQ97_21405 PF16124 RecQ zinc-binding MNQ97_21410 PF02253 Phospholipase A1 MNQ97_21415 PF03061 Thioesterase superfamily MNQ97_21420 PF00892 EamA-like transporter family MNQ97_21425 PF01544 CorA-like Mg2+ transporter protein MNQ97_21435 PF09370 Phosphoenolpyruvate hydrolase-like MNQ97_21450 PF13361 UvrD-like helicase C-terminal domain MNQ97_21450 PF00580 UvrD/REP helicase N-terminal domain MNQ97_21455 PF13419 Haloacid dehalogenase-like hydrolase MNQ97_21460 PF00589 Phage integrase family MNQ97_21460 PF02899 Phage integrase, N-terminal SAM-like domain MNQ97_21465 PF04340 Protein of unknown function, DUF484 MNQ97_21470 PF01678 Diaminopimelate epimerase MNQ97_21475 PF13627 Prokaryotic lipoprotein-attachment site MNQ97_21480 PF01491 Frataxin-like domain MNQ97_21485 PF12633 Adenylate cyclase NT domain MNQ97_21485 PF01295 Adenylate cyclase, class-I MNQ97_21490 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MNQ97_21490 PF03900 Porphobilinogen deaminase, C-terminal domain MNQ97_21495 PF02602 Uroporphyrinogen-III synthase HemD MNQ97_21500 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase MNQ97_21505 PF07219 HemY protein N-terminus MNQ97_21505 PF07719 Tetratricopeptide repeat MNQ97_21530 PF00324 Amino acid permease MNQ97_21535 PF03808 Glycosyl transferase WecB/TagA/CpsF family MNQ97_21540 PF06899 WzyE protein, O-antigen assembly polymerase MNQ97_21545 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 MNQ97_21550 PF01943 Polysaccharide biosynthesis protein MNQ97_21555 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MNQ97_21565 PF00483 Nucleotidyl transferase MNQ97_21570 PF16363 GDP-mannose 4,6 dehydratase MNQ97_21575 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MNQ97_21575 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MNQ97_21575 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MNQ97_21580 PF02350 UDP-N-acetylglucosamine 2-epimerase MNQ97_21585 PF02706 Chain length determinant protein MNQ97_21590 PF00953 Glycosyl transferase family 4 MNQ97_21595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MNQ97_21595 PF07498 Rho termination factor, N-terminal domain MNQ97_21595 PF07497 Rho termination factor, RNA-binding domain MNQ97_21600 PF00085 Thioredoxin MNQ97_21605 PF00270 DEAD/DEAH box helicase MNQ97_21605 PF00271 Helicase conserved C-terminal domain MNQ97_21610 PF02541 Ppx/GppA phosphatase family MNQ97_21615 PF00295 Glycosyl hydrolases family 28 MNQ97_21620 PF13361 UvrD-like helicase C-terminal domain MNQ97_21620 PF00580 UvrD/REP helicase N-terminal domain MNQ97_21635 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_21635 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_21640 PF13953 PapC C-terminal domain MNQ97_21640 PF13954 PapC N-terminal domain MNQ97_21640 PF00577 Outer membrane usher protein MNQ97_21650 PF02753 Pili assembly chaperone PapD, C-terminal domain MNQ97_21650 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MNQ97_21655 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MNQ97_21655 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MNQ97_21660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_21660 PF03466 LysR substrate binding domain MNQ97_21670 PF00291 Pyridoxal-phosphate dependent enzyme MNQ97_21670 PF00585 C-terminal regulatory domain of Threonine dehydratase MNQ97_21675 PF00920 Dehydratase family MNQ97_21680 PF01063 Amino-transferase class IV MNQ97_21690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MNQ97_21690 PF00205 Thiamine pyrophosphate enzyme, central domain MNQ97_21690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MNQ97_21695 PF08046 IlvGEDA operon leader peptide MNQ97_21700 PF01078 Magnesium chelatase, subunit ChlI MNQ97_21700 PF13335 Magnesium chelatase, subunit ChlI C-terminal MNQ97_21705 PF04219 Protein of unknown function, DUF MNQ97_21710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_21710 PF03466 LysR substrate binding domain MNQ97_21715 PF02653 Branched-chain amino acid transport system / permease component MNQ97_21720 PF02653 Branched-chain amino acid transport system / permease component MNQ97_21725 PF00005 ABC transporter MNQ97_21730 PF13407 Periplasmic binding protein domain MNQ97_21770 PF01177 Asp/Glu/Hydantoin racemase MNQ97_21775 PF00593 TonB dependent receptor MNQ97_21775 PF07715 TonB-dependent Receptor Plug Domain MNQ97_21780 PF05958 tRNA (Uracil-5-)-methyltransferase MNQ97_21785 PF07226 Protein of unknown function (DUF1422) MNQ97_21790 PF00440 Bacterial regulatory proteins, tetR family MNQ97_21795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MNQ97_21795 PF07992 Pyridine nucleotide-disulphide oxidoreductase MNQ97_21800 PF03466 LysR substrate binding domain MNQ97_21800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MNQ97_21805 PF08534 Redoxin MNQ97_21805 PF00462 Glutaredoxin MNQ97_21810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MNQ97_21810 PF07992 Pyridine nucleotide-disulphide oxidoreductase MNQ97_21830 PF00529 HlyD membrane-fusion protein of T1SS MNQ97_21835 PF00664 ABC transporter transmembrane region MNQ97_21835 PF00005 ABC transporter MNQ97_21855 PF00593 TonB dependent receptor MNQ97_21855 PF07715 TonB-dependent Receptor Plug Domain MNQ97_21860 PF14698 Argininosuccinate lyase C-terminal MNQ97_21860 PF00206 Lyase MNQ97_21865 PF00696 Amino acid kinase family MNQ97_21870 PF02774 Semialdehyde dehydrogenase, dimerisation domain MNQ97_21870 PF01118 Semialdehyde dehydrogenase, NAD binding domain MNQ97_21875 PF01546 Peptidase family M20/M25/M40 MNQ97_21875 PF07687 Peptidase dimerisation domain MNQ97_21880 PF00311 Phosphoenolpyruvate carboxylase MNQ97_21885 PF02219 Methylenetetrahydrofolate reductase MNQ97_21890 PF00696 Amino acid kinase family MNQ97_21890 PF00742 Homoserine dehydrogenase MNQ97_21890 PF03447 Homoserine dehydrogenase, NAD binding domain MNQ97_21895 PF01053 Cys/Met metabolism PLP-dependent enzyme MNQ97_21900 PF01340 Met Apo-repressor, MetJ MNQ97_21905 PF01197 Ribosomal protein L31 MNQ97_21910 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MNQ97_21910 PF18074 Primosomal protein N C-terminal domain MNQ97_21910 PF17764 3′ DNA-binding domain (3′BD) MNQ97_21910 PF00271 Helicase conserved C-terminal domain MNQ97_21910 PF00270 DEAD/DEAH box helicase MNQ97_21915 PF00356 Bacterial regulatory proteins, lacI family MNQ97_21920 PF05036 Sporulation related domain MNQ97_21925 PF00227 Proteasome subunit MNQ97_21930 PF00004 ATPase family associated with various cellular activities (AAA) MNQ97_21930 PF07724 AAA domain (Cdc48 subfamily) MNQ97_21930 PF10431 C-terminal, D2-small domain, of ClpB protein MNQ97_21935 PF01040 UbiA prenyltransferase family MNQ97_21940 PF03737 Aldolase/RraA MNQ97_21945 PF06005 Cell division protein ZapB MNQ97_21950 PF00230 Major intrinsic protein MNQ97_21955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MNQ97_21955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MNQ97_21960 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded MNQ97_21965 PF07690 Major Facilitator Superfamily MNQ97_21970 PF00970 Oxidoreductase FAD-binding domain MNQ97_21970 PF00175 Oxidoreductase NAD-binding domain MNQ97_21975 PF05656 Protein of unknown function (DUF805) MNQ97_21980 PF07305 Protein of unknown function (DUF1454) MNQ97_21985 PF00121 Triosephosphate isomerase MNQ97_21995 PF00365 Phosphofructokinase MNQ97_22000 PF01545 Cation efflux family MNQ97_22000 PF16916 Dimerisation domain of Zinc Transporter MNQ97_22015 PF05973 Phage derived protein Gp49-like (DUF891) MNQ97_22025 PF07813 LTXXQ motif family protein MNQ97_22030 PF00072 Response regulator receiver domain MNQ97_22030 PF00486 Transcriptional regulatory protein, C terminal MNQ97_22035 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_22035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_22035 PF00672 HAMP domain MNQ97_22035 PF16527 Two-component sensor protein CpxA, periplasmic domain MNQ97_22040 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MNQ97_22040 PF02805 Metal binding domain of Ada MNQ97_22040 PF12833 Helix-turn-helix domain MNQ97_22040 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MNQ97_22045 PF00588 SpoU rRNA Methylase family MNQ97_22050 PF00132 Bacterial transferase hexapeptide (six repeats) MNQ97_22050 PF06426 Serine acetyltransferase, N-terminal MNQ97_22055 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MNQ97_22055 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MNQ97_22060 PF02556 Preprotein translocase subunit SecB MNQ97_22065 PF00462 Glutaredoxin MNQ97_22070 PF00581 Rhodanese-like domain MNQ97_22075 PF06415 BPG-independent PGAM N-terminus (iPGM_N) MNQ97_22075 PF01676 Metalloenzyme superfamily MNQ97_22080 PF01551 Peptidase family M23 MNQ97_22085 PF04748 Divergent polysaccharide deacetylase MNQ97_22090 PF08240 Alcohol dehydrogenase GroES-like domain MNQ97_22090 PF00107 Zinc-binding dehydrogenase MNQ97_22095 PF00155 Aminotransferase class I and II MNQ97_22100 PF01370 NAD dependent epimerase/dehydratase family MNQ97_22105 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MNQ97_22110 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MNQ97_22115 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MNQ97_22120 PF00535 Glycosyl transferase family 2 MNQ97_22125 PF01467 Cytidylyltransferase-like MNQ97_22130 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MNQ97_22130 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MNQ97_22130 PF06827 Zinc finger found in FPG and IleRS MNQ97_22135 PF00471 Ribosomal protein L33 MNQ97_22140 PF00830 Ribosomal L28 family MNQ97_22145 PF04002 RadC-like JAB domain MNQ97_22150 PF02441 Flavoprotein MNQ97_22150 PF04127 DNA / pantothenate metabolism flavoprotein MNQ97_22155 PF00692 dUTPase MNQ97_22160 PF00440 Bacterial regulatory proteins, tetR family MNQ97_22165 PF00156 Phosphoribosyl transferase domain MNQ97_22170 PF01138 3' exoribonuclease family, domain 1 MNQ97_22170 PF03725 3' exoribonuclease family, domain 2 MNQ97_22175 PF03755 YicC-like family, N-terminal region MNQ97_22175 PF08340 Domain of unknown function (DUF1732) MNQ97_22185 PF01381 Helix-turn-helix MNQ97_22200 PF00563 EAL domain MNQ97_22200 PF00990 Diguanylate cyclase, GGDEF domain MNQ97_22200 PF13426 PAS domain MNQ97_22205 PF00378 Enoyl-CoA hydratase/isomerase MNQ97_22210 PF07670 Nucleoside recognition MNQ97_22210 PF07662 Na+ dependent nucleoside transporter C-terminus MNQ97_22210 PF01773 Na+ dependent nucleoside transporter N-terminus MNQ97_22220 PF03458 UPF0126 domain MNQ97_22225 PF03120 NAD-dependent DNA ligase OB-fold domain MNQ97_22225 PF01653 NAD-dependent DNA ligase adenylation domain MNQ97_22230 PF00625 Guanylate kinase MNQ97_22235 PF01192 RNA polymerase Rpb6 MNQ97_22240 PF13291 ACT domain MNQ97_22240 PF04607 Region found in RelA / SpoT proteins MNQ97_22240 PF02824 TGS domain MNQ97_22245 PF12105 SpoU, rRNA methylase, C-terminal MNQ97_22245 PF00588 SpoU rRNA Methylase family MNQ97_22250 PF00270 DEAD/DEAH box helicase MNQ97_22250 PF00271 Helicase conserved C-terminal domain MNQ97_22250 PF17191 RecG wedge domain MNQ97_22255 PF03616 Sodium/glutamate symporter MNQ97_22260 PF00860 Permease family MNQ97_22265 PF05170 AsmA family MNQ97_22280 PF13693 Winged helix-turn-helix DNA-binding MNQ97_22295 PF02954 Bacterial regulatory protein, Fis family MNQ97_22295 PF00072 Response regulator receiver domain MNQ97_22295 PF00158 Sigma-54 interaction domain MNQ97_22300 PF00583 Acetyltransferase (GNAT) family MNQ97_22300 PF09500 Putative thioesterase (yiiD_Cterm) MNQ97_22305 PF02580 D-Tyr-tRNA(Tyr) deacylase MNQ97_22310 PF03631 Virulence factor BrkB MNQ97_22315 PF13419 Haloacid dehalogenase-like hydrolase MNQ97_22320 PF00679 Elongation factor G C-terminus MNQ97_22320 PF00009 Elongation factor Tu GTP binding domain MNQ97_22320 PF03144 Elongation factor Tu domain 2 MNQ97_22325 PF03951 Glutamine synthetase, beta-Grasp domain MNQ97_22325 PF00120 Glutamine synthetase, catalytic domain MNQ97_22330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MNQ97_22330 PF00512 His Kinase A (phospho-acceptor) domain MNQ97_22330 PF00989 PAS fold MNQ97_22335 PF02954 Bacterial regulatory protein, Fis family MNQ97_22335 PF00072 Response regulator receiver domain MNQ97_22335 PF00158 Sigma-54 interaction domain MNQ97_22340 PF06969 HemN C-terminal domain MNQ97_22340 PF04055 Radical SAM superfamily MNQ97_22345 PF04220 Der GTPase activator (YihI) MNQ97_22350 PF01926 50S ribosome-binding GTPase MNQ97_22355 PF01612 3'-5' exonuclease MNQ97_22355 PF00476 DNA polymerase family A MNQ97_22355 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MNQ97_22355 PF01367 5'-3' exonuclease, C-terminal SAM fold MNQ97_22360 PF01323 DSBA-like thioredoxin domain MNQ97_22365 PF01636 Phosphotransferase enzyme family MNQ97_22370 PF06288 Protein of unknown function (DUF1040) MNQ97_22375 PF12804 MobA-like NTP transferase domain MNQ97_22380 PF03205 Molybdopterin guanine dinucleotide synthesis protein B MNQ97_22405 PF07729 FCD domain MNQ97_22405 PF00392 Bacterial regulatory proteins, gntR family MNQ97_22410 PF07690 Major Facilitator Superfamily MNQ97_22415 PF00356 Bacterial regulatory proteins, lacI family MNQ97_22420 PF00294 pfkB family carbohydrate kinase MNQ97_22425 PF13407 Periplasmic binding protein domain MNQ97_22430 PF02653 Branched-chain amino acid transport system / permease component MNQ97_22435 PF00005 ABC transporter MNQ97_22440 PF05025 RbsD / FucU transport protein family MNQ97_22445 PF02705 K+ potassium transporter MNQ97_22450 PF07728 AAA domain (dynein-related subfamily) MNQ97_22450 PF17868 AAA lid domain MNQ97_22450 PF12592 Protein of unknown function (DUF3763) MNQ97_22455 PF05762 VWA domain containing CoxE-like protein MNQ97_22465 PF03590 Aspartate-ammonia ligase MNQ97_22470 PF01037 Lrp/AsnC ligand binding domain MNQ97_22475 PF00258 Flavodoxin