CH53_2921 79160f94265a3ec4f47cac001aa92335 913 ProSitePatterns PS01229 Hypothetical cof family signature 2. 797 819 - T 18-10-2018 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 Gene3D G3DSA:3.40.50.1000 581 849 2.7E-92 T 18-10-2018 IPR023214 HAD superfamily CH53_2921 79160f94265a3ec4f47cac001aa92335 913 SUPERFAMILY SSF81665 365 864 2.35E-10 T 18-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 312 906 4.3E-184 T 18-10-2018 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 SUPERFAMILY SSF55008 177 246 2.49E-17 T 18-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 Gene3D G3DSA:2.70.150.20 391 503 8.7E-33 T 18-10-2018 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 SUPERFAMILY SSF55008 1 68 9.56E-12 T 18-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 SUPERFAMILY SSF55008 70 131 2.75E-11 T 18-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 Gene3D G3DSA:3.40.1110.10 611 729 2.7E-92 T 18-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 SUPERFAMILY SSF56784 598 903 1.32E-60 T 18-10-2018 IPR036412 HAD-like superfamily CH53_2921 79160f94265a3ec4f47cac001aa92335 913 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 602 608 - T 18-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 Pfam PF00403 Heavy-metal-associated domain 186 238 2.6E-12 T 18-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 Pfam PF00403 Heavy-metal-associated domain 7 62 4.5E-9 T 18-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 Pfam PF00403 Heavy-metal-associated domain 73 128 3.6E-7 T 18-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 331 906 1.5E-178 T 18-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 Pfam PF00702 haloacid dehalogenase-like hydrolase 597 811 4.0E-47 T 18-10-2018 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 ProSitePatterns PS01047 Heavy-metal-associated domain. 184 213 - T 18-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 Pfam PF00122 E1-E2 ATPase 399 579 4.2E-50 T 18-10-2018 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 Gene3D G3DSA:3.30.70.100 71 132 7.3E-13 T 18-10-2018 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 Gene3D G3DSA:3.30.70.100 180 243 1.6E-18 T 18-10-2018 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 SUPERFAMILY SSF81653 401 498 2.88E-24 T 18-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 744 754 5.4E-25 T 18-10-2018 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 820 832 5.4E-25 T 18-10-2018 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 797 816 5.4E-25 T 18-10-2018 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 722 733 5.4E-25 T 18-10-2018 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 600 614 5.4E-25 T 18-10-2018 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 448 462 5.4E-25 T 18-10-2018 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 18-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 370 875 7.2E-83 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 769 785 3.0E-8 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 828 853 3.0E-8 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 797 813 3.0E-8 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_2921 79160f94265a3ec4f47cac001aa92335 913 Gene3D G3DSA:3.30.70.100 6 64 1.3E-11 T 18-10-2018 CH53_3371 36f556d224a30c7f1c5d13074834ef1a 300 Pfam PF10114 Sensory domain found in PocR 7 164 2.2E-42 T 18-10-2018 IPR018771 PocR domain CH53_3371 36f556d224a30c7f1c5d13074834ef1a 300 Gene3D G3DSA:1.10.10.60 189 239 2.1E-16 T 18-10-2018 CH53_3371 36f556d224a30c7f1c5d13074834ef1a 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 2.3E-6 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_3371 36f556d224a30c7f1c5d13074834ef1a 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 2.3E-6 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_3371 36f556d224a30c7f1c5d13074834ef1a 300 SMART SM00342 207 290 2.3E-34 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_3371 36f556d224a30c7f1c5d13074834ef1a 300 SUPERFAMILY SSF46689 244 291 1.12E-11 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3371 36f556d224a30c7f1c5d13074834ef1a 300 SUPERFAMILY SSF46689 190 241 4.93E-9 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3371 36f556d224a30c7f1c5d13074834ef1a 300 Gene3D G3DSA:1.10.10.60 240 295 4.0E-17 T 18-10-2018 CH53_3371 36f556d224a30c7f1c5d13074834ef1a 300 Pfam PF12833 Helix-turn-helix domain 214 290 2.2E-19 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_3067 fb0a19542b293602ad05d1c8f507d8a5 222 SUPERFAMILY SSF52374 11 219 5.93E-57 T 18-10-2018 CH53_3067 fb0a19542b293602ad05d1c8f507d8a5 222 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 9 219 31.322 T 18-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CH53_3067 fb0a19542b293602ad05d1c8f507d8a5 222 Pfam PF01467 Cytidylyltransferase-like 13 193 9.7E-35 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CH53_3067 fb0a19542b293602ad05d1c8f507d8a5 222 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 12 74 1.0E-13 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CH53_3067 fb0a19542b293602ad05d1c8f507d8a5 222 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 13 218 9.0E-58 T 18-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CH53_3067 fb0a19542b293602ad05d1c8f507d8a5 222 Gene3D G3DSA:3.40.50.620 8 219 1.0E-64 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 Pfam PF00990 Diguanylate cyclase, GGDEF domain 437 592 2.2E-42 T 18-10-2018 IPR000160 GGDEF domain CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 SUPERFAMILY SSF55781 284 437 4.14E-23 T 18-10-2018 CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 PIRSF PIRSF005925 12 147 1.6E-6 T 18-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 PIRSF PIRSF005925 135 865 1.2E-246 T 18-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 434 594 4.7E-37 T 18-10-2018 IPR000160 GGDEF domain CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 Gene3D G3DSA:3.30.450.20 12 145 5.2E-22 T 18-10-2018 CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 Gene3D G3DSA:3.30.450.40 287 433 1.1E-18 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 SUPERFAMILY SSF55073 442 598 1.65E-44 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 Pfam PF00563 EAL domain 613 847 1.1E-69 T 18-10-2018 IPR001633 EAL domain CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 SMART SM00065 266 434 6.9E-8 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 Pfam PF08447 PAS fold 43 129 1.3E-14 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 SMART SM00052 607 853 1.2E-101 T 18-10-2018 IPR001633 EAL domain CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 SMART SM00267 426 597 4.2E-53 T 18-10-2018 IPR000160 GGDEF domain CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 Pfam PF13185 GAF domain 282 425 4.3E-13 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 Gene3D G3DSA:3.20.20.450 611 862 1.4E-90 T 18-10-2018 IPR035919 EAL domain superfamily CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 SMART SM00086 223 264 16.0 T 18-10-2018 IPR001610 PAC motif CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 SMART SM00086 93 135 0.04 T 18-10-2018 IPR001610 PAC motif CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 SUPERFAMILY SSF55785 30 133 1.1E-24 T 18-10-2018 IPR035965 PAS domain superfamily CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 Pfam PF13426 PAS domain 159 262 3.5E-9 T 18-10-2018 IPR000014 PAS domain CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 Gene3D G3DSA:3.30.450.20 146 286 2.9E-18 T 18-10-2018 CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 26 140 1.4E-18 T 18-10-2018 IPR000014 PAS domain CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 268 4.6E-11 T 18-10-2018 IPR000014 PAS domain CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 SMART SM00091 18 88 5.3E-5 T 18-10-2018 IPR000014 PAS domain CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 SMART SM00091 147 216 0.0033 T 18-10-2018 IPR000014 PAS domain CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 Gene3D G3DSA:3.30.70.270 434 610 8.3E-52 T 18-10-2018 CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 SUPERFAMILY SSF55785 171 262 2.51E-14 T 18-10-2018 IPR035965 PAS domain superfamily CH53_3841 9774eaf00b0de46bb3b1f36527f79836 865 SUPERFAMILY SSF141868 612 861 5.36E-81 T 18-10-2018 IPR035919 EAL domain superfamily CH53_307 ba087ad4b807e7486dbd7301bb19528b 306 Pfam PF03466 LysR substrate binding domain 92 293 2.7E-28 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_307 ba087ad4b807e7486dbd7301bb19528b 306 Gene3D G3DSA:3.40.190.10 164 266 2.0E-42 T 18-10-2018 CH53_307 ba087ad4b807e7486dbd7301bb19528b 306 Gene3D G3DSA:1.10.10.10 7 96 2.7E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_307 ba087ad4b807e7486dbd7301bb19528b 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.4E-16 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_307 ba087ad4b807e7486dbd7301bb19528b 306 Gene3D G3DSA:3.40.190.10 101 291 2.0E-42 T 18-10-2018 CH53_307 ba087ad4b807e7486dbd7301bb19528b 306 SUPERFAMILY SSF53850 94 297 6.33E-28 T 18-10-2018 CH53_307 ba087ad4b807e7486dbd7301bb19528b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.8E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_307 ba087ad4b807e7486dbd7301bb19528b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.8E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_307 ba087ad4b807e7486dbd7301bb19528b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.8E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_307 ba087ad4b807e7486dbd7301bb19528b 306 SUPERFAMILY SSF46785 4 84 6.5E-19 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2285 d3ced3d49dfa9e3dc083731fca47cf45 234 SUPERFAMILY SSF51182 1 232 3.47E-47 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_2285 d3ced3d49dfa9e3dc083731fca47cf45 234 Pfam PF02678 Pirin 5 119 8.8E-22 T 18-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CH53_2285 d3ced3d49dfa9e3dc083731fca47cf45 234 Gene3D G3DSA:2.60.120.10 134 234 3.4E-35 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_2285 d3ced3d49dfa9e3dc083731fca47cf45 234 PIRSF PIRSF006232 1 231 7.3E-33 T 18-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CH53_2285 d3ced3d49dfa9e3dc083731fca47cf45 234 Gene3D G3DSA:2.60.120.10 12 133 2.1E-37 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_120 52754a067e0d58a39233d35487f5c5de 424 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 420 1.3E-165 T 18-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CH53_120 52754a067e0d58a39233d35487f5c5de 424 PIRSF PIRSF000447 1 424 4.0E-162 T 18-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CH53_120 52754a067e0d58a39233d35487f5c5de 424 Gene3D G3DSA:3.40.47.10 271 424 7.8E-49 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_120 52754a067e0d58a39233d35487f5c5de 424 SUPERFAMILY SSF53901 226 422 1.98E-64 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_120 52754a067e0d58a39233d35487f5c5de 424 Gene3D G3DSA:3.40.47.10 1 265 6.4E-84 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_120 52754a067e0d58a39233d35487f5c5de 424 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 265 378 1.3E-35 T 18-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CH53_120 52754a067e0d58a39233d35487f5c5de 424 SUPERFAMILY SSF53901 4 262 1.25E-70 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_120 52754a067e0d58a39233d35487f5c5de 424 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 257 4.0E-57 T 18-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CH53_120 52754a067e0d58a39233d35487f5c5de 424 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 164 180 - T 18-10-2018 IPR018201 Beta-ketoacyl synthase, active site CH53_120 52754a067e0d58a39233d35487f5c5de 424 SMART SM00825 Beta-ketoacyl synthase 6 424 1.1E-13 T 18-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH53_3176 538bc5e7d396e161a3aad52ab6b7c60a 263 Pfam PF03459 TOBE domain 124 188 3.0E-14 T 18-10-2018 IPR005116 Transport-associated OB, type 1 CH53_3176 538bc5e7d396e161a3aad52ab6b7c60a 263 Pfam PF03459 TOBE domain 198 258 3.8E-12 T 18-10-2018 IPR005116 Transport-associated OB, type 1 CH53_3176 538bc5e7d396e161a3aad52ab6b7c60a 263 Gene3D G3DSA:2.40.50.100 108 182 1.4E-22 T 18-10-2018 CH53_3176 538bc5e7d396e161a3aad52ab6b7c60a 263 PIRSF PIRSF005763 1 263 6.8E-94 T 18-10-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 CH53_3176 538bc5e7d396e161a3aad52ab6b7c60a 263 Gene3D G3DSA:2.40.50.100 183 253 3.8E-18 T 18-10-2018 CH53_3176 538bc5e7d396e161a3aad52ab6b7c60a 263 SUPERFAMILY SSF50331 126 259 3.29E-20 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CH53_3176 538bc5e7d396e161a3aad52ab6b7c60a 263 SUPERFAMILY SSF46785 2 103 2.04E-25 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3176 538bc5e7d396e161a3aad52ab6b7c60a 263 Gene3D G3DSA:1.10.10.10 1 107 9.8E-35 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3176 538bc5e7d396e161a3aad52ab6b7c60a 263 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 190 1.5E-24 T 18-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 CH53_3176 538bc5e7d396e161a3aad52ab6b7c60a 263 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 112 1.9E-37 T 18-10-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal CH53_3176 538bc5e7d396e161a3aad52ab6b7c60a 263 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 1.3E-12 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_656 e7c4bfe2e3bb161fb29d2b234a484193 299 Gene3D G3DSA:1.10.10.10 18 78 8.2E-9 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_656 e7c4bfe2e3bb161fb29d2b234a484193 299 Pfam PF14502 Helix-turn-helix domain 25 71 6.8E-23 T 18-10-2018 CH53_656 e7c4bfe2e3bb161fb29d2b234a484193 299 SUPERFAMILY SSF53850 74 299 1.09E-81 T 18-10-2018 CH53_656 e7c4bfe2e3bb161fb29d2b234a484193 299 Gene3D G3DSA:3.40.190.10 167 256 1.3E-66 T 18-10-2018 CH53_656 e7c4bfe2e3bb161fb29d2b234a484193 299 Gene3D G3DSA:3.40.190.10 91 299 1.3E-66 T 18-10-2018 CH53_656 e7c4bfe2e3bb161fb29d2b234a484193 299 Pfam PF14503 YhfZ C-terminal domain 76 299 1.6E-81 T 18-10-2018 IPR032791 Uncharacterised protein YhfZ, C-terminal domain CH53_656 e7c4bfe2e3bb161fb29d2b234a484193 299 SUPERFAMILY SSF46785 18 71 4.73E-7 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1273 2d7eec6ede11781947399297b3886784 667 Pfam PF03880 DbpA RNA binding domain 501 570 1.9E-19 T 18-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CH53_1273 2d7eec6ede11781947399297b3886784 667 SMART SM00490 261 342 2.4E-32 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_1273 2d7eec6ede11781947399297b3886784 667 Gene3D G3DSA:3.40.50.300 2 213 8.8E-78 T 18-10-2018 CH53_1273 2d7eec6ede11781947399297b3886784 667 Pfam PF00271 Helicase conserved C-terminal domain 234 342 7.0E-29 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_1273 2d7eec6ede11781947399297b3886784 667 Pfam PF12343 Cold shock protein DEAD box A 591 667 6.1E-16 T 18-10-2018 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 CH53_1273 2d7eec6ede11781947399297b3886784 667 SMART SM00487 26 224 8.3E-66 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH53_1273 2d7eec6ede11781947399297b3886784 667 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 18-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CH53_1273 2d7eec6ede11781947399297b3886784 667 Pfam PF00270 DEAD/DEAH box helicase 32 196 4.8E-51 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CH53_1273 2d7eec6ede11781947399297b3886784 667 Gene3D G3DSA:3.40.50.300 217 434 7.5E-50 T 18-10-2018 CH53_1273 2d7eec6ede11781947399297b3886784 667 SUPERFAMILY SSF52540 5 210 3.45E-73 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1273 2d7eec6ede11781947399297b3886784 667 Gene3D G3DSA:3.30.70.330 498 571 3.2E-9 T 18-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CH53_1273 2d7eec6ede11781947399297b3886784 667 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 572 46.344 T 18-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 CH53_1273 2d7eec6ede11781947399297b3886784 667 SUPERFAMILY SSF52540 148 356 4.37E-50 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 PRINTS PR01900 YidC translocation/secretion protein signature 487 511 1.5E-29 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 PRINTS PR01900 YidC translocation/secretion protein signature 338 354 1.5E-29 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 PRINTS PR01900 YidC translocation/secretion protein signature 467 482 1.5E-29 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 351 4.1E-118 T 18-10-2018 IPR028053 Membrane insertase YidC, N-terminal CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 Pfam PF14849 YidC periplasmic domain 61 342 1.0E-88 T 18-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 352 532 1.8E-69 T 18-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 Pfam PF02096 60Kd inner membrane protein 353 532 2.8E-60 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 Gene3D G3DSA:2.70.98.90 56 332 8.5E-108 T 18-10-2018 IPR038221 YidC, periplasmic domain superfamily CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 PRINTS PR00701 60kDa inner membrane protein signature 414 437 7.1E-106 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 PRINTS PR00701 60kDa inner membrane protein signature 498 521 7.1E-106 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 PRINTS PR00701 60kDa inner membrane protein signature 250 265 7.1E-106 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 PRINTS PR00701 60kDa inner membrane protein signature 2 23 7.1E-106 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 PRINTS PR00701 60kDa inner membrane protein signature 217 235 7.1E-106 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 PRINTS PR00701 60kDa inner membrane protein signature 323 343 7.1E-106 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 PRINTS PR00701 60kDa inner membrane protein signature 461 483 7.1E-106 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 PRINTS PR00701 60kDa inner membrane protein signature 158 178 7.1E-106 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 PRINTS PR00701 60kDa inner membrane protein signature 66 87 7.1E-106 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CH53_1735 e55344f963d5b6d4c9f86c84e97c1303 546 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 534 26.538 T 18-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 CH53_3225 dea4876c9034711fc96987e4aa6a24f1 352 Pfam PF00487 Fatty acid desaturase 66 296 5.3E-31 T 18-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 4.2E-94 T 18-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 4.2E-94 T 18-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 4.2E-94 T 18-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 4.2E-94 T 18-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 4.2E-94 T 18-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 4.2E-94 T 18-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 4.2E-94 T 18-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 4.2E-94 T 18-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 637 2.8E-131 T 18-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 Pfam PF01578 Cytochrome C assembly protein 89 296 3.0E-54 T 18-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 3.4E-58 T 18-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.4E-58 T 18-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 3.4E-58 T 18-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 3.4E-58 T 18-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 3.4E-58 T 18-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 3.4E-58 T 18-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 3.4E-58 T 18-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_446 5cab4b3a35b60dbbe916e19c2aaafbea 655 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 2.4E-281 T 18-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_690 857ca502d5bf07116cd4b38193f68940 441 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 18-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CH53_690 857ca502d5bf07116cd4b38193f68940 441 Pfam PF00271 Helicase conserved C-terminal domain 236 343 1.3E-25 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_690 857ca502d5bf07116cd4b38193f68940 441 SMART SM00490 262 343 1.2E-26 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_690 857ca502d5bf07116cd4b38193f68940 441 Pfam PF00270 DEAD/DEAH box helicase 28 196 1.0E-46 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CH53_690 857ca502d5bf07116cd4b38193f68940 441 Gene3D G3DSA:3.40.50.300 219 388 9.2E-48 T 18-10-2018 CH53_690 857ca502d5bf07116cd4b38193f68940 441 SMART SM00487 23 225 6.4E-59 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH53_690 857ca502d5bf07116cd4b38193f68940 441 SUPERFAMILY SSF52540 35 354 3.67E-66 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_690 857ca502d5bf07116cd4b38193f68940 441 Gene3D G3DSA:3.40.50.300 1 212 1.0E-71 T 18-10-2018 CH53_690 857ca502d5bf07116cd4b38193f68940 441 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 427 49.306 T 18-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 CH53_3219 0f8249315fc3db820b5ce6384cd80c56 519 Pfam PF02653 Branched-chain amino acid transport system / permease component 227 502 9.6E-50 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_3219 0f8249315fc3db820b5ce6384cd80c56 519 Gene3D G3DSA:1.25.10.10 88 224 9.7E-9 T 18-10-2018 IPR011989 Armadillo-like helical CH53_3219 0f8249315fc3db820b5ce6384cd80c56 519 SUPERFAMILY SSF48371 108 215 3.39E-11 T 18-10-2018 IPR016024 Armadillo-type fold CH53_3219 0f8249315fc3db820b5ce6384cd80c56 519 Pfam PF13646 HEAT repeats 162 215 4.0E-7 T 18-10-2018 CH53_3219 0f8249315fc3db820b5ce6384cd80c56 519 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 225 516 4.7E-130 T 18-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type CH53_4296 1e9a98473106ebdf1144a85dd1017c0d 290 SUPERFAMILY SSF55120 69 229 2.23E-37 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_4296 1e9a98473106ebdf1144a85dd1017c0d 290 SMART SM00363 7 63 2.8E-9 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_4296 1e9a98473106ebdf1144a85dd1017c0d 290 Pfam PF00849 RNA pseudouridylate synthase 69 195 2.9E-14 T 18-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_4296 1e9a98473106ebdf1144a85dd1017c0d 290 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 5.2E-51 T 18-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CH53_4296 1e9a98473106ebdf1144a85dd1017c0d 290 SUPERFAMILY SSF55174 8 62 2.35E-12 T 18-10-2018 CH53_4296 1e9a98473106ebdf1144a85dd1017c0d 290 Pfam PF01479 S4 domain 8 52 1.5E-9 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_4296 1e9a98473106ebdf1144a85dd1017c0d 290 Gene3D G3DSA:3.30.70.1560 134 207 9.2E-55 T 18-10-2018 CH53_4296 1e9a98473106ebdf1144a85dd1017c0d 290 Gene3D G3DSA:3.30.70.580 70 229 9.2E-55 T 18-10-2018 CH53_4296 1e9a98473106ebdf1144a85dd1017c0d 290 Gene3D G3DSA:3.10.290.10 1 62 1.4E-21 T 18-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CH53_4296 1e9a98473106ebdf1144a85dd1017c0d 290 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 18-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CH53_1054 ea38aab638cef59a4bc412eb45d97571 277 Pfam PF05099 Tellurite resistance protein TerB 45 171 2.7E-12 T 18-10-2018 IPR007791 Co-chaperone DjlA, N-terminal CH53_1054 ea38aab638cef59a4bc412eb45d97571 277 PRINTS PR00625 DnaJ domain signature 231 246 3.1E-6 T 18-10-2018 IPR001623 DnaJ domain CH53_1054 ea38aab638cef59a4bc412eb45d97571 277 PRINTS PR00625 DnaJ domain signature 213 231 3.1E-6 T 18-10-2018 IPR001623 DnaJ domain CH53_1054 ea38aab638cef59a4bc412eb45d97571 277 PRINTS PR00625 DnaJ domain signature 255 275 3.1E-6 T 18-10-2018 IPR001623 DnaJ domain CH53_1054 ea38aab638cef59a4bc412eb45d97571 277 SMART SM00271 210 275 2.1E-15 T 18-10-2018 IPR001623 DnaJ domain CH53_1054 ea38aab638cef59a4bc412eb45d97571 277 SUPERFAMILY SSF46565 132 273 1.05E-27 T 18-10-2018 IPR036869 Chaperone J-domain superfamily CH53_1054 ea38aab638cef59a4bc412eb45d97571 277 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 276 39.89 T 18-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 CH53_1054 ea38aab638cef59a4bc412eb45d97571 277 Pfam PF00226 DnaJ domain 214 273 1.2E-9 T 18-10-2018 IPR001623 DnaJ domain CH53_1054 ea38aab638cef59a4bc412eb45d97571 277 Gene3D G3DSA:1.10.287.110 191 275 4.6E-13 T 18-10-2018 IPR036869 Chaperone J-domain superfamily CH53_1054 ea38aab638cef59a4bc412eb45d97571 277 Gene3D G3DSA:1.10.3680.10 38 184 7.8E-21 T 18-10-2018 IPR029024 TerB-like CH53_4123 64145e377e3383a2f8b8f99bb0b16860 676 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 34 676 1.3E-133 T 18-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 CH53_4123 64145e377e3383a2f8b8f99bb0b16860 676 Pfam PF00593 TonB dependent receptor 247 674 1.3E-34 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CH53_4123 64145e377e3383a2f8b8f99bb0b16860 676 SUPERFAMILY SSF56935 35 676 4.19E-85 T 18-10-2018 CH53_4123 64145e377e3383a2f8b8f99bb0b16860 676 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 37 676 2.0E-111 T 18-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 CH53_4123 64145e377e3383a2f8b8f99bb0b16860 676 Gene3D G3DSA:2.170.130.10 33 155 6.3E-33 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CH53_4123 64145e377e3383a2f8b8f99bb0b16860 676 Gene3D G3DSA:2.40.170.20 156 676 2.9E-106 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH53_4123 64145e377e3383a2f8b8f99bb0b16860 676 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 150 1.1E-21 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain CH53_1739 d08537c85c8fb82fdae7fcb17a9542be 338 Pfam PF00005 ABC transporter 21 169 1.9E-35 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1739 d08537c85c8fb82fdae7fcb17a9542be 338 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1739 d08537c85c8fb82fdae7fcb17a9542be 338 Pfam PF09383 NIL domain 266 335 4.6E-17 T 18-10-2018 IPR018449 NIL domain CH53_1739 d08537c85c8fb82fdae7fcb17a9542be 338 SMART SM00382 30 218 8.9E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1739 d08537c85c8fb82fdae7fcb17a9542be 338 SUPERFAMILY SSF55021 252 337 1.26E-19 T 18-10-2018 CH53_1739 d08537c85c8fb82fdae7fcb17a9542be 338 Gene3D G3DSA:3.40.50.300 1 232 4.2E-72 T 18-10-2018 CH53_1739 d08537c85c8fb82fdae7fcb17a9542be 338 Gene3D G3DSA:3.30.70.260 233 337 1.3E-22 T 18-10-2018 CH53_1739 d08537c85c8fb82fdae7fcb17a9542be 338 SMART SM00930 262 337 5.4E-23 T 18-10-2018 IPR018449 NIL domain CH53_1739 d08537c85c8fb82fdae7fcb17a9542be 338 SUPERFAMILY SSF52540 1 240 1.54E-82 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1488 00a18445e8b922661c15e2de04c9db17 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 5.1E-93 T 18-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1488 00a18445e8b922661c15e2de04c9db17 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 18-10-2018 IPR019926 Ribosomal protein L3, conserved site CH53_1488 00a18445e8b922661c15e2de04c9db17 209 Gene3D G3DSA:2.40.50.620 32 94 9.9E-15 T 18-10-2018 CH53_1488 00a18445e8b922661c15e2de04c9db17 209 Pfam PF00297 Ribosomal protein L3 94 182 2.8E-13 T 18-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1488 00a18445e8b922661c15e2de04c9db17 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.13 T 18-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1488 00a18445e8b922661c15e2de04c9db17 209 Gene3D G3DSA:2.40.30.10 128 209 1.3E-18 T 18-10-2018 CH53_1488 00a18445e8b922661c15e2de04c9db17 209 SUPERFAMILY SSF50447 1 208 1.32E-80 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CH53_2661 f9c610d7e6dff771be7c00939369a405 215 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 17 206 9.2E-30 T 18-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 CH53_2661 f9c610d7e6dff771be7c00939369a405 215 Gene3D G3DSA:3.10.610.10 48 158 3.5E-6 T 18-10-2018 CH53_2661 f9c610d7e6dff771be7c00939369a405 215 SUPERFAMILY SSF54523 52 209 1.41E-31 T 18-10-2018 CH53_2661 f9c610d7e6dff771be7c00939369a405 215 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 36 7.5E-5 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site CH53_2661 f9c610d7e6dff771be7c00939369a405 215 Gene3D G3DSA:2.10.70.20 163 211 2.2E-10 T 18-10-2018 CH53_2661 f9c610d7e6dff771be7c00939369a405 215 Pfam PF07963 Prokaryotic N-terminal methylation motif 14 38 1.4E-5 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site CH53_2661 f9c610d7e6dff771be7c00939369a405 215 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site CH53_2661 f9c610d7e6dff771be7c00939369a405 215 Pfam PF11612 Type II secretion system (T2SS), protein J 77 204 5.9E-16 T 18-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 CH53_37 eac0af65e0f5f74b67ebedff54e15bb0 860 SUPERFAMILY SSF53448 261 548 4.05E-27 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_37 eac0af65e0f5f74b67ebedff54e15bb0 860 Gene3D G3DSA:3.90.550.10 257 485 4.3E-13 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_37 eac0af65e0f5f74b67ebedff54e15bb0 860 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 83 762 51.434 T 18-10-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 CH53_37 eac0af65e0f5f74b67ebedff54e15bb0 860 Pfam PF00535 Glycosyl transferase family 2 263 445 3.1E-22 T 18-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 107 203 3.6E-22 T 18-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 Pfam PF04829 Pre-toxin domain with VENN motif 2265 2314 6.8E-21 T 18-10-2018 IPR006914 VENN motif-containing domain CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 Pfam PF05594 Haemagluttinin repeat 756 782 190.0 T 18-10-2018 IPR008619 Filamentous haemagglutinin repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 Pfam PF05594 Haemagluttinin repeat 626 674 0.55 T 18-10-2018 IPR008619 Filamentous haemagglutinin repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 Pfam PF05594 Haemagluttinin repeat 490 572 0.72 T 18-10-2018 IPR008619 Filamentous haemagglutinin repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 Pfam PF05594 Haemagluttinin repeat 255 339 0.073 T 18-10-2018 IPR008619 Filamentous haemagglutinin repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 Pfam PF05594 Haemagluttinin repeat 682 744 8.5E-5 T 18-10-2018 IPR008619 Filamentous haemagglutinin repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 SUPERFAMILY SSF51126 77 358 1.29E-68 T 18-10-2018 IPR011050 Pectin lyase fold/virulence factor CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 SMART SM00912 88 208 1.0E-45 T 18-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 Pfam PF05860 haemagglutination activity domain 74 207 6.7E-33 T 18-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 Pfam PF13332 Haemagluttinin repeat 1752 1923 1.5E-48 T 18-10-2018 IPR025157 Hemagglutinin repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 Pfam PF13332 Haemagluttinin repeat 1522 1599 6.3E-4 T 18-10-2018 IPR025157 Hemagglutinin repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 Pfam PF13332 Haemagluttinin repeat 1459 1507 0.0034 T 18-10-2018 IPR025157 Hemagglutinin repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 Pfam PF13332 Haemagluttinin repeat 1374 1442 0.0089 T 18-10-2018 IPR025157 Hemagglutinin repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 Pfam PF13332 Haemagluttinin repeat 1257 1305 5.7E-4 T 18-10-2018 IPR025157 Hemagglutinin repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 Pfam PF13332 Haemagluttinin repeat 1607 1725 4.8E-7 T 18-10-2018 IPR025157 Hemagglutinin repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 3.4E-6 T 18-10-2018 IPR024973 ESPR domain CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 Pfam PF15542 Bacterial toxin 50 2499 2594 1.0E-19 T 18-10-2018 IPR029100 Bacterial toxin 50 CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 839 868 0.0051 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 317 353 0.56 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 513 543 0.026 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 492 512 2.4 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 687 725 0.0076 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 353 388 5.6E-6 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 664 705 1.5 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 706 744 1.0 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 744 775 0.66 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 648 682 0.26 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_1183 922bda1c07e475585d6c347cb4214f0e 2597 Gene3D G3DSA:2.160.20.10 75 350 1.3E-105 T 18-10-2018 IPR012334 Pectin lyase fold CH53_1364 78bc89938531a4c58bb6112626f250ac 550 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 9.1E-254 T 18-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CH53_1364 78bc89938531a4c58bb6112626f250ac 550 Gene3D G3DSA:1.10.560.10 8 523 5.8E-238 T 18-10-2018 IPR027413 GroEL-like equatorial domain superfamily CH53_1364 78bc89938531a4c58bb6112626f250ac 550 SUPERFAMILY SSF48592 7 523 2.98E-76 T 18-10-2018 IPR027413 GroEL-like equatorial domain superfamily CH53_1364 78bc89938531a4c58bb6112626f250ac 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 525 8.3E-93 T 18-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CH53_1364 78bc89938531a4c58bb6112626f250ac 550 Hamap MF_00600 60 kDa chaperonin [groL]. 2 549 41.456 T 18-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CH53_1364 78bc89938531a4c58bb6112626f250ac 550 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 18-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CH53_1364 78bc89938531a4c58bb6112626f250ac 550 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 18-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CH53_1364 78bc89938531a4c58bb6112626f250ac 550 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 18-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CH53_1364 78bc89938531a4c58bb6112626f250ac 550 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 18-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CH53_1364 78bc89938531a4c58bb6112626f250ac 550 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 18-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CH53_1364 78bc89938531a4c58bb6112626f250ac 550 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 18-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CH53_1364 78bc89938531a4c58bb6112626f250ac 550 SUPERFAMILY SSF52029 185 376 7.67E-82 T 18-10-2018 IPR027409 GroEL-like apical domain superfamily CH53_1364 78bc89938531a4c58bb6112626f250ac 550 Gene3D G3DSA:3.30.260.10 136 410 5.8E-238 T 18-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CH53_1364 78bc89938531a4c58bb6112626f250ac 550 SUPERFAMILY SSF54849 137 203 5.04E-24 T 18-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CH53_1364 78bc89938531a4c58bb6112626f250ac 550 Gene3D G3DSA:3.50.7.10 192 372 5.8E-238 T 18-10-2018 IPR027409 GroEL-like apical domain superfamily CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 Pfam PF00009 Elongation factor Tu GTP binding domain 395 552 4.4E-35 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 SUPERFAMILY SSF46955 3 50 2.75E-13 T 18-10-2018 IPR009061 Putative DNA-binding domain superfamily CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 ProSitePatterns PS01176 Initiation factor 2 signature. 842 864 - T 18-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 Gene3D G3DSA:3.40.50.300 389 562 1.1E-72 T 18-10-2018 CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 306 891 9.6E-292 T 18-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 889 17.6 T 18-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 SUPERFAMILY SSF52540 391 559 4.39E-53 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 Gene3D G3DSA:3.30.56.50 2 50 4.3E-27 T 18-10-2018 CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 Gene3D G3DSA:2.40.30.10 793 890 2.0E-34 T 18-10-2018 CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 Gene3D G3DSA:3.40.50.10050 685 792 1.1E-36 T 18-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 57 94 4.6E-16 T 18-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 6.4E-8 T 18-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 314 364 1.8E-14 T 18-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 Pfam PF11987 Translation-initiation factor 2 676 781 4.9E-36 T 18-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 Pfam PF03144 Elongation factor Tu domain 2 812 879 8.0E-8 T 18-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 Gene3D G3DSA:2.40.30.10 563 681 1.4E-39 T 18-10-2018 CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 SUPERFAMILY SSF50447 792 889 5.3E-35 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 394 550 2.4E-33 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 SUPERFAMILY SSF50447 565 646 6.86E-23 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CH53_1279 fa13033fe2c5fb57275849b1ed5daa9e 892 SUPERFAMILY SSF52156 669 798 1.09E-37 T 18-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CH53_2855 4034d22511754ea651bbd5072df6578f 318 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 150 220 1.5E-5 T 18-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2855 4034d22511754ea651bbd5072df6578f 318 SUPERFAMILY SSF81464 18 116 4.25E-23 T 18-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2855 4034d22511754ea651bbd5072df6578f 318 Gene3D G3DSA:2.60.40.420 113 283 2.4E-59 T 18-10-2018 IPR008972 Cupredoxin CH53_2855 4034d22511754ea651bbd5072df6578f 318 PIRSF PIRSF000292 1 313 9.7E-131 T 18-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 CH53_2855 4034d22511754ea651bbd5072df6578f 318 SUPERFAMILY SSF49503 124 282 1.33E-52 T 18-10-2018 IPR008972 Cupredoxin CH53_2855 4034d22511754ea651bbd5072df6578f 318 Pfam PF06481 COX Aromatic Rich Motif 240 286 3.0E-20 T 18-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 CH53_2855 4034d22511754ea651bbd5072df6578f 318 Gene3D G3DSA:1.10.287.90 27 112 5.2E-32 T 18-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2855 4034d22511754ea651bbd5072df6578f 318 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 240 7.9E-113 T 18-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 CH53_3725 4b3f543a12364cbf117005a4ae24807f 388 Pfam PF07690 Major Facilitator Superfamily 9 340 4.6E-42 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_3725 4b3f543a12364cbf117005a4ae24807f 388 SUPERFAMILY SSF103473 3 377 1.44E-54 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_3725 4b3f543a12364cbf117005a4ae24807f 388 Gene3D G3DSA:1.20.1250.20 3 376 1.2E-48 T 18-10-2018 CH53_1413 40f682159b7d745146596413f2eb0718 682 Pfam PF00771 FHIPEP family 29 663 4.4E-214 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_1413 40f682159b7d745146596413f2eb0718 682 Gene3D G3DSA:3.40.30.60 351 486 5.5E-10 T 18-10-2018 CH53_1413 40f682159b7d745146596413f2eb0718 682 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 16 671 2.8E-267 T 18-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 CH53_1413 40f682159b7d745146596413f2eb0718 682 Gene3D G3DSA:1.10.490.80 577 671 2.4E-25 T 18-10-2018 CH53_1413 40f682159b7d745146596413f2eb0718 682 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 139 162 - T 18-10-2018 IPR025505 FHIPEP conserved site CH53_1413 40f682159b7d745146596413f2eb0718 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 72 91 8.6E-56 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_1413 40f682159b7d745146596413f2eb0718 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 35 48 8.6E-56 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_1413 40f682159b7d745146596413f2eb0718 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 153 171 8.6E-56 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_1413 40f682159b7d745146596413f2eb0718 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 134 150 8.6E-56 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_1413 40f682159b7d745146596413f2eb0718 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 183 200 8.6E-56 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_1413 40f682159b7d745146596413f2eb0718 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 234 248 8.6E-56 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_1413 40f682159b7d745146596413f2eb0718 682 PIRSF PIRSF005419 2 676 8.3E-223 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_1413 40f682159b7d745146596413f2eb0718 682 Gene3D G3DSA:1.10.8.540 487 575 6.1E-31 T 18-10-2018 CH53_1962 068cc2d2a97bc91f5b929d9e65956791 243 SUPERFAMILY SSF49354 23 149 9.94E-41 T 18-10-2018 IPR008962 PapD-like superfamily CH53_1962 068cc2d2a97bc91f5b929d9e65956791 243 PRINTS PR00969 Pili chaperone signature 78 99 1.3E-25 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1962 068cc2d2a97bc91f5b929d9e65956791 243 PRINTS PR00969 Pili chaperone signature 29 38 1.3E-25 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1962 068cc2d2a97bc91f5b929d9e65956791 243 PRINTS PR00969 Pili chaperone signature 131 146 1.3E-25 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1962 068cc2d2a97bc91f5b929d9e65956791 243 PRINTS PR00969 Pili chaperone signature 170 185 1.3E-25 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1962 068cc2d2a97bc91f5b929d9e65956791 243 PRINTS PR00969 Pili chaperone signature 106 123 1.3E-25 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1962 068cc2d2a97bc91f5b929d9e65956791 243 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 149 2.5E-40 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_1962 068cc2d2a97bc91f5b929d9e65956791 243 SUPERFAMILY SSF49584 143 240 2.75E-13 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_1962 068cc2d2a97bc91f5b929d9e65956791 243 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 237 4.0E-14 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_1962 068cc2d2a97bc91f5b929d9e65956791 243 Gene3D G3DSA:2.60.40.10 30 149 1.7E-38 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_1962 068cc2d2a97bc91f5b929d9e65956791 243 Gene3D G3DSA:2.60.40.10 152 243 1.3E-17 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_210 76cb6b17cd14a4e9411a7399aac75e1e 223 Pfam PF01569 PAP2 superfamily 89 210 1.6E-9 T 18-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CH53_210 76cb6b17cd14a4e9411a7399aac75e1e 223 Gene3D G3DSA:1.20.144.10 130 222 1.6E-6 T 18-10-2018 CH53_210 76cb6b17cd14a4e9411a7399aac75e1e 223 SUPERFAMILY SSF48317 5 210 1.83E-11 T 18-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CH53_687 6346a81218b35c426f92c67327713a0d 191 SUPERFAMILY SSF88659 122 183 5.23E-18 T 18-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CH53_687 6346a81218b35c426f92c67327713a0d 191 Pfam PF08281 Sigma-70, region 4 129 180 1.1E-18 T 18-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CH53_687 6346a81218b35c426f92c67327713a0d 191 Pfam PF04542 Sigma-70 region 2 25 91 1.2E-16 T 18-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CH53_687 6346a81218b35c426f92c67327713a0d 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 18-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CH53_687 6346a81218b35c426f92c67327713a0d 191 SUPERFAMILY SSF88946 2 104 5.97E-30 T 18-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CH53_687 6346a81218b35c426f92c67327713a0d 191 Gene3D G3DSA:1.10.1740.10 1 120 1.6E-46 T 18-10-2018 CH53_687 6346a81218b35c426f92c67327713a0d 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 183 2.4E-30 T 18-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CH53_687 6346a81218b35c426f92c67327713a0d 191 Gene3D G3DSA:1.10.10.10 121 191 7.8E-23 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_687 6346a81218b35c426f92c67327713a0d 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 1.0E-99 T 18-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CH53_3355 15110e03aa5e558c21abb2899ca56b3f 371 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 361 6.2E-107 T 18-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CH53_3355 15110e03aa5e558c21abb2899ca56b3f 371 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 154 182 - T 18-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CH53_3355 15110e03aa5e558c21abb2899ca56b3f 371 Gene3D G3DSA:1.20.1090.10 167 371 5.3E-63 T 18-10-2018 CH53_3355 15110e03aa5e558c21abb2899ca56b3f 371 Gene3D G3DSA:3.40.50.1970 1 165 1.9E-44 T 18-10-2018 CH53_3355 15110e03aa5e558c21abb2899ca56b3f 371 SUPERFAMILY SSF56796 2 369 1.2E-106 T 18-10-2018 CH53_2891 c4fc97c097bd47e06ce0449c0df825a5 218 SUPERFAMILY SSF46689 2 79 6.98E-21 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_2891 c4fc97c097bd47e06ce0449c0df825a5 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.5E-10 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_2891 c4fc97c097bd47e06ce0449c0df825a5 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.5E-10 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_2891 c4fc97c097bd47e06ce0449c0df825a5 218 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 18-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CH53_2891 c4fc97c097bd47e06ce0449c0df825a5 218 Gene3D G3DSA:1.10.357.10 1 215 1.7E-81 T 18-10-2018 CH53_2891 c4fc97c097bd47e06ce0449c0df825a5 218 SUPERFAMILY SSF48498 85 203 1.5E-13 T 18-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH53_2891 c4fc97c097bd47e06ce0449c0df825a5 218 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 202 2.9E-54 T 18-10-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 CH53_2891 c4fc97c097bd47e06ce0449c0df825a5 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 4.7E-19 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_3978 b60bf05c6200fab8bdbf2d0d5db31f24 490 SUPERFAMILY SSF53383 116 489 1.92E-84 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_3978 b60bf05c6200fab8bdbf2d0d5db31f24 490 SUPERFAMILY SSF46785 21 91 7.02E-15 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3978 b60bf05c6200fab8bdbf2d0d5db31f24 490 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 81 1.0E-11 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_3978 b60bf05c6200fab8bdbf2d0d5db31f24 490 Gene3D G3DSA:3.40.640.10 128 484 1.2E-111 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_3978 b60bf05c6200fab8bdbf2d0d5db31f24 490 SMART SM00345 22 81 2.6E-10 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_3978 b60bf05c6200fab8bdbf2d0d5db31f24 490 Pfam PF00155 Aminotransferase class I and II 173 429 6.8E-19 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_3978 b60bf05c6200fab8bdbf2d0d5db31f24 490 Gene3D G3DSA:1.10.10.10 18 119 2.5E-16 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 Gene3D G3DSA:1.20.1640.10 516 1026 0.0 T 18-10-2018 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 SUPERFAMILY SSF82693 135 330 2.41E-27 T 18-10-2018 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1048 0.0 T 18-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 Gene3D G3DSA:3.30.70.1320 133 330 0.0 T 18-10-2018 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.3E-115 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.3E-115 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.3E-115 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.3E-115 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.3E-115 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.3E-115 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 2.3E-115 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.3E-115 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.3E-115 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 SUPERFAMILY SSF82693 38 132 4.19E-27 T 18-10-2018 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 SUPERFAMILY SSF82693 566 670 1.62E-32 T 18-10-2018 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 SUPERFAMILY SSF82714 182 272 7.59E-20 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 Gene3D G3DSA:3.30.70.1440 675 865 0.0 T 18-10-2018 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 Gene3D G3DSA:3.30.70.1430 570 674 0.0 T 18-10-2018 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 SUPERFAMILY SSF82866 807 1032 3.66E-45 T 18-10-2018 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 SUPERFAMILY SSF82866 296 497 2.88E-49 T 18-10-2018 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 SUPERFAMILY SSF82714 724 811 2.62E-22 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 Gene3D G3DSA:3.30.70.1430 38 821 0.0 T 18-10-2018 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 Gene3D G3DSA:1.20.1640.10 8 515 0.0 T 18-10-2018 CH53_2889 d9528ec8a572d667945bcd59c054a95c 1050 Gene3D G3DSA:3.30.2090.10 725 813 0.0 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_4333 0de7f6c2af618e3586bccf14eae8210e 369 SUPERFAMILY SSF56349 84 368 4.12E-56 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CH53_4333 0de7f6c2af618e3586bccf14eae8210e 369 SUPERFAMILY SSF54171 11 60 9.81E-12 T 18-10-2018 IPR016177 DNA-binding domain superfamily GO:0003677 CH53_4333 0de7f6c2af618e3586bccf14eae8210e 369 Pfam PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain 1 69 6.0E-17 T 18-10-2018 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 CH53_4333 0de7f6c2af618e3586bccf14eae8210e 369 Gene3D G3DSA:1.10.443.10 187 369 1.8E-39 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CH53_4333 0de7f6c2af618e3586bccf14eae8210e 369 Gene3D G3DSA:1.10.150.130 84 186 1.0E-29 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal CH53_4333 0de7f6c2af618e3586bccf14eae8210e 369 Gene3D G3DSA:3.30.160.60 1 64 7.0E-9 T 18-10-2018 CH53_4333 0de7f6c2af618e3586bccf14eae8210e 369 Pfam PF00589 Phage integrase family 197 363 1.2E-22 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CH53_25 b6a870d97a4f620a10034709bd472000 1027 Pfam PF00384 Molybdopterin oxidoreductase 243 688 8.4E-16 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_25 b6a870d97a4f620a10034709bd472000 1027 Gene3D G3DSA:2.40.40.20 854 1005 6.1E-27 T 18-10-2018 CH53_25 b6a870d97a4f620a10034709bd472000 1027 SMART SM00926 71 153 6.2E-14 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_25 b6a870d97a4f620a10034709bd472000 1027 SUPERFAMILY SSF50692 876 1003 1.33E-29 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CH53_25 b6a870d97a4f620a10034709bd472000 1027 SUPERFAMILY SSF53706 74 896 1.93E-109 T 18-10-2018 CH53_25 b6a870d97a4f620a10034709bd472000 1027 Pfam PF01568 Molydopterin dinucleotide binding domain 898 999 8.7E-17 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CH53_25 b6a870d97a4f620a10034709bd472000 1027 Gene3D G3DSA:3.40.50.740 62 711 1.3E-74 T 18-10-2018 CH53_1584 7fe73135fc95fc206115d83d423263e7 559 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 178 9.9E-48 T 18-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CH53_1584 7fe73135fc95fc206115d83d423263e7 559 Gene3D G3DSA:3.40.50.970 2 187 2.1E-63 T 18-10-2018 CH53_1584 7fe73135fc95fc206115d83d423263e7 559 SUPERFAMILY SSF52518 371 551 3.93E-52 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_1584 7fe73135fc95fc206115d83d423263e7 559 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 430 449 - T 18-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CH53_1584 7fe73135fc95fc206115d83d423263e7 559 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 331 1.1E-28 T 18-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CH53_1584 7fe73135fc95fc206115d83d423263e7 559 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 538 1.0E-38 T 18-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CH53_1584 7fe73135fc95fc206115d83d423263e7 559 SUPERFAMILY SSF52518 13 184 1.72E-45 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_1584 7fe73135fc95fc206115d83d423263e7 559 SUPERFAMILY SSF52467 194 345 9.58E-37 T 18-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH53_1584 7fe73135fc95fc206115d83d423263e7 559 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 13 551 2.0E-260 T 18-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CH53_1584 7fe73135fc95fc206115d83d423263e7 559 Gene3D G3DSA:3.40.50.1220 190 355 2.4E-37 T 18-10-2018 CH53_1584 7fe73135fc95fc206115d83d423263e7 559 Gene3D G3DSA:3.40.50.970 366 559 5.9E-57 T 18-10-2018 CH53_2605 4c738120392f61b1fefa8e3147b7ae98 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 4.1E-51 T 18-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2605 4c738120392f61b1fefa8e3147b7ae98 338 PIRSF PIRSF000149 1 337 6.4E-127 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2605 4c738120392f61b1fefa8e3147b7ae98 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 2.2E-29 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2605 4c738120392f61b1fefa8e3147b7ae98 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 2.2E-29 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2605 4c738120392f61b1fefa8e3147b7ae98 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 2.2E-29 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2605 4c738120392f61b1fefa8e3147b7ae98 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 2.2E-29 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2605 4c738120392f61b1fefa8e3147b7ae98 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 2.2E-29 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2605 4c738120392f61b1fefa8e3147b7ae98 338 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 18-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2605 4c738120392f61b1fefa8e3147b7ae98 338 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 63.793 T 18-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 CH53_2605 4c738120392f61b1fefa8e3147b7ae98 338 SUPERFAMILY SSF55347 155 317 3.57E-54 T 18-10-2018 CH53_2605 4c738120392f61b1fefa8e3147b7ae98 338 Gene3D G3DSA:3.40.50.720 4 328 2.7E-128 T 18-10-2018 CH53_2605 4c738120392f61b1fefa8e3147b7ae98 338 Gene3D G3DSA:3.30.360.10 154 318 2.7E-128 T 18-10-2018 CH53_2605 4c738120392f61b1fefa8e3147b7ae98 338 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 5.4E-183 T 18-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 CH53_2605 4c738120392f61b1fefa8e3147b7ae98 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 8.3E-33 T 18-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2605 4c738120392f61b1fefa8e3147b7ae98 338 SMART SM00846 3 155 1.1E-78 T 18-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2605 4c738120392f61b1fefa8e3147b7ae98 338 SUPERFAMILY SSF51735 1 154 1.14E-52 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1975 58214136c635755a6ad00f16c6053816 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 5.8E-20 T 18-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CH53_1975 58214136c635755a6ad00f16c6053816 420 PIRSF PIRSF000124 4 418 1.4E-74 T 18-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CH53_1975 58214136c635755a6ad00f16c6053816 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 7.4E-119 T 18-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CH53_1975 58214136c635755a6ad00f16c6053816 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 79.263 T 18-10-2018 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335 CH53_1975 58214136c635755a6ad00f16c6053816 420 Gene3D G3DSA:3.40.50.720 205 420 1.0E-59 T 18-10-2018 CH53_1975 58214136c635755a6ad00f16c6053816 420 Gene3D G3DSA:3.40.50.720 2 202 4.4E-64 T 18-10-2018 CH53_1975 58214136c635755a6ad00f16c6053816 420 SUPERFAMILY SSF52413 311 419 3.92E-26 T 18-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 CH53_1975 58214136c635755a6ad00f16c6053816 420 PIRSF PIRSF500136 1 420 4.2E-148 T 18-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CH53_1975 58214136c635755a6ad00f16c6053816 420 SUPERFAMILY SSF48179 206 298 1.62E-27 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_1975 58214136c635755a6ad00f16c6053816 420 SMART SM00984 324 420 9.7E-27 T 18-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CH53_1975 58214136c635755a6ad00f16c6053816 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 3.0E-26 T 18-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CH53_1975 58214136c635755a6ad00f16c6053816 420 SUPERFAMILY SSF51735 5 198 2.88E-45 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1975 58214136c635755a6ad00f16c6053816 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 189 1.8E-58 T 18-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CH53_1880 03f11d5981ac10dc3ff7fd44d66a24b1 458 SUPERFAMILY SSF55874 289 455 1.83E-39 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1880 03f11d5981ac10dc3ff7fd44d66a24b1 458 Gene3D G3DSA:3.30.450.210 27 147 1.0E-10 T 18-10-2018 IPR038515 CpxA, periplasmic domain superfamily CH53_1880 03f11d5981ac10dc3ff7fd44d66a24b1 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 454 2.3E-20 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_1880 03f11d5981ac10dc3ff7fd44d66a24b1 458 Gene3D G3DSA:1.10.287.130 188 302 3.5E-37 T 18-10-2018 CH53_1880 03f11d5981ac10dc3ff7fd44d66a24b1 458 SMART SM00388 238 300 1.7E-14 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_1880 03f11d5981ac10dc3ff7fd44d66a24b1 458 SUPERFAMILY SSF47384 224 299 1.51E-15 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_1880 03f11d5981ac10dc3ff7fd44d66a24b1 458 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 83 153 6.4E-11 T 18-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain CH53_1880 03f11d5981ac10dc3ff7fd44d66a24b1 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 298 1.3E-13 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_1880 03f11d5981ac10dc3ff7fd44d66a24b1 458 SMART SM00387 345 455 2.6E-32 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_1880 03f11d5981ac10dc3ff7fd44d66a24b1 458 Pfam PF00672 HAMP domain 184 233 1.6E-6 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_1880 03f11d5981ac10dc3ff7fd44d66a24b1 458 SMART SM00304 184 237 1.0E-7 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_1880 03f11d5981ac10dc3ff7fd44d66a24b1 458 Gene3D G3DSA:3.30.565.10 304 454 4.1E-41 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1880 03f11d5981ac10dc3ff7fd44d66a24b1 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 6.6E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1880 03f11d5981ac10dc3ff7fd44d66a24b1 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 6.6E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1880 03f11d5981ac10dc3ff7fd44d66a24b1 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 6.6E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2266 3b7afdcdc424f8927e85ab5ef475b5db 171 Pfam PF04386 Stringent starvation protein B 9 171 7.4E-44 T 18-10-2018 IPR007481 Stringent starvation protein B CH53_2266 3b7afdcdc424f8927e85ab5ef475b5db 171 SUPERFAMILY SSF101738 3 112 7.19E-49 T 18-10-2018 IPR036760 SspB-like superfamily CH53_2266 3b7afdcdc424f8927e85ab5ef475b5db 171 PIRSF PIRSF005276 3 171 9.1E-63 T 18-10-2018 IPR007481 Stringent starvation protein B CH53_2266 3b7afdcdc424f8927e85ab5ef475b5db 171 Gene3D G3DSA:2.30.30.220 3 130 7.9E-54 T 18-10-2018 IPR036760 SspB-like superfamily CH53_3433 d2db53baf9d6b9f99c744c7639b902ba 243 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 149 3.0E-41 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_3433 d2db53baf9d6b9f99c744c7639b902ba 243 PRINTS PR00969 Pili chaperone signature 76 97 3.4E-28 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3433 d2db53baf9d6b9f99c744c7639b902ba 243 PRINTS PR00969 Pili chaperone signature 104 121 3.4E-28 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3433 d2db53baf9d6b9f99c744c7639b902ba 243 PRINTS PR00969 Pili chaperone signature 130 145 3.4E-28 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3433 d2db53baf9d6b9f99c744c7639b902ba 243 PRINTS PR00969 Pili chaperone signature 27 36 3.4E-28 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3433 d2db53baf9d6b9f99c744c7639b902ba 243 PRINTS PR00969 Pili chaperone signature 168 183 3.4E-28 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3433 d2db53baf9d6b9f99c744c7639b902ba 243 Gene3D G3DSA:2.60.40.10 151 243 1.4E-15 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_3433 d2db53baf9d6b9f99c744c7639b902ba 243 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 173 236 1.8E-12 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_3433 d2db53baf9d6b9f99c744c7639b902ba 243 SUPERFAMILY SSF49354 22 148 6.28E-39 T 18-10-2018 IPR008962 PapD-like superfamily CH53_3433 d2db53baf9d6b9f99c744c7639b902ba 243 SUPERFAMILY SSF49584 151 240 8.76E-13 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_3433 d2db53baf9d6b9f99c744c7639b902ba 243 Gene3D G3DSA:2.60.40.10 28 149 6.1E-41 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_1466 36b24613b794edc4fbba17e3f435aac6 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.2E-52 T 18-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1466 36b24613b794edc4fbba17e3f435aac6 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 5.1E-33 T 18-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1466 36b24613b794edc4fbba17e3f435aac6 118 PIRSF PIRSF002134 1 118 6.8E-42 T 18-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1466 36b24613b794edc4fbba17e3f435aac6 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 18-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1466 36b24613b794edc4fbba17e3f435aac6 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.349 T 18-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1466 36b24613b794edc4fbba17e3f435aac6 118 SUPERFAMILY SSF46946 2 114 3.68E-46 T 18-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CH53_1466 36b24613b794edc4fbba17e3f435aac6 118 Gene3D G3DSA:1.10.8.50 1 71 8.7E-28 T 18-10-2018 CH53_1466 36b24613b794edc4fbba17e3f435aac6 118 Gene3D G3DSA:4.10.910.10 72 118 2.3E-25 T 18-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_4046 775c172901f6261c6921b4c6d328503b 1178 PIRSF PIRSF000159 1 1178 0.0 T 18-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CH53_4046 775c172901f6261c6921b4c6d328503b 1178 SUPERFAMILY SSF54862 665 837 1.28E-22 T 18-10-2018 CH53_4046 775c172901f6261c6921b4c6d328503b 1178 SUPERFAMILY SSF52518 2 254 7.95E-73 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_4046 775c172901f6261c6921b4c6d328503b 1178 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 350 7.0E-15 T 18-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CH53_4046 775c172901f6261c6921b4c6d328503b 1178 Gene3D G3DSA:4.10.780.10 633 668 4.9E-7 T 18-10-2018 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily CH53_4046 775c172901f6261c6921b4c6d328503b 1178 SUPERFAMILY SSF52922 255 409 8.17E-42 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CH53_4046 775c172901f6261c6921b4c6d328503b 1178 Gene3D G3DSA:3.30.70.20 669 791 3.4E-38 T 18-10-2018 CH53_4046 775c172901f6261c6921b4c6d328503b 1178 Pfam PF10371 Domain of unknown function 627 678 1.3E-23 T 18-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CH53_4046 775c172901f6261c6921b4c6d328503b 1178 SUPERFAMILY SSF52518 794 1165 5.89E-117 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_4046 775c172901f6261c6921b4c6d328503b 1178 Gene3D G3DSA:3.40.50.970 793 1170 2.1E-150 T 18-10-2018 CH53_4046 775c172901f6261c6921b4c6d328503b 1178 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 957 1069 1.8E-8 T 18-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CH53_4046 775c172901f6261c6921b4c6d328503b 1178 SMART SM00890 622 679 2.4E-30 T 18-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CH53_4046 775c172901f6261c6921b4c6d328503b 1178 Gene3D G3DSA:3.40.50.920 255 415 9.0E-55 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CH53_4046 775c172901f6261c6921b4c6d328503b 1178 Gene3D G3DSA:3.40.50.970 1 254 6.5E-106 T 18-10-2018 CH53_4046 775c172901f6261c6921b4c6d328503b 1178 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1168 0.0 T 18-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CH53_4046 775c172901f6261c6921b4c6d328503b 1178 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_4046 775c172901f6261c6921b4c6d328503b 1178 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_4046 775c172901f6261c6921b4c6d328503b 1178 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 3.3E-80 T 18-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CH53_4046 775c172901f6261c6921b4c6d328503b 1178 Pfam PF12838 4Fe-4S dicluster domain 689 757 3.1E-9 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_4046 775c172901f6261c6921b4c6d328503b 1178 Gene3D G3DSA:3.40.920.10 416 624 9.4E-74 T 18-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CH53_4046 775c172901f6261c6921b4c6d328503b 1178 SUPERFAMILY SSF53323 417 668 3.79E-74 T 18-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CH53_4046 775c172901f6261c6921b4c6d328503b 1178 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 608 1.1E-34 T 18-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CH53_823 4047369ee87567a52c1f1879bd7d735a 354 PRINTS PR00142 RecA protein signature 212 240 1.4E-84 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CH53_823 4047369ee87567a52c1f1879bd7d735a 354 PRINTS PR00142 RecA protein signature 299 316 1.4E-84 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CH53_823 4047369ee87567a52c1f1879bd7d735a 354 PRINTS PR00142 RecA protein signature 129 158 1.4E-84 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CH53_823 4047369ee87567a52c1f1879bd7d735a 354 PRINTS PR00142 RecA protein signature 167 196 1.4E-84 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CH53_823 4047369ee87567a52c1f1879bd7d735a 354 PRINTS PR00142 RecA protein signature 245 274 1.4E-84 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CH53_823 4047369ee87567a52c1f1879bd7d735a 354 PRINTS PR00142 RecA protein signature 95 124 1.4E-84 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CH53_823 4047369ee87567a52c1f1879bd7d735a 354 SUPERFAMILY SSF54752 272 327 2.35E-20 T 18-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CH53_823 4047369ee87567a52c1f1879bd7d735a 354 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 3.1E-170 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CH53_823 4047369ee87567a52c1f1879bd7d735a 354 SUPERFAMILY SSF52540 6 269 8.42E-64 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_823 4047369ee87567a52c1f1879bd7d735a 354 SMART SM00382 59 230 1.2E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_823 4047369ee87567a52c1f1879bd7d735a 354 ProSitePatterns PS00321 recA signature. 215 223 - T 18-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CH53_823 4047369ee87567a52c1f1879bd7d735a 354 Pfam PF00154 recA bacterial DNA recombination protein 9 270 4.8E-141 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CH53_823 4047369ee87567a52c1f1879bd7d735a 354 Gene3D G3DSA:3.30.250.10 271 329 1.4E-25 T 18-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CH53_823 4047369ee87567a52c1f1879bd7d735a 354 Hamap MF_00268 Protein RecA [recA]. 7 331 50.713 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CH53_823 4047369ee87567a52c1f1879bd7d735a 354 Gene3D G3DSA:3.40.50.300 28 269 2.4E-81 T 18-10-2018 CH53_3836 b25f51e122d69cbd307d70de27f95f78 239 Pfam PF07840 FadR C-terminal domain 72 234 1.6E-73 T 18-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 CH53_3836 b25f51e122d69cbd307d70de27f95f78 239 SMART SM00345 12 71 5.9E-23 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_3836 b25f51e122d69cbd307d70de27f95f78 239 Gene3D G3DSA:1.20.120.530 80 239 3.6E-45 T 18-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CH53_3836 b25f51e122d69cbd307d70de27f95f78 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_3836 b25f51e122d69cbd307d70de27f95f78 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_3836 b25f51e122d69cbd307d70de27f95f78 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 236 1.4E-122 T 18-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 CH53_3836 b25f51e122d69cbd307d70de27f95f78 239 SUPERFAMILY SSF48008 79 230 2.75E-65 T 18-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CH53_3836 b25f51e122d69cbd307d70de27f95f78 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 162.251 T 18-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 CH53_3836 b25f51e122d69cbd307d70de27f95f78 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.8E-20 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_3836 b25f51e122d69cbd307d70de27f95f78 239 SUPERFAMILY SSF46785 11 87 2.81E-17 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3836 b25f51e122d69cbd307d70de27f95f78 239 Gene3D G3DSA:1.10.10.10 1 79 4.9E-23 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_441 ae891632e4d6504f969cc652961664d1 425 Gene3D G3DSA:2.40.160.60 26 425 3.3E-141 T 18-10-2018 CH53_441 ae891632e4d6504f969cc652961664d1 425 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 425 6.6E-141 T 18-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CH53_441 ae891632e4d6504f969cc652961664d1 425 SUPERFAMILY SSF56935 26 425 9.16E-103 T 18-10-2018 CH53_2933 63d61c5a7ca1837c6f039f0af735efb6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 2.5E-11 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CH53_2933 63d61c5a7ca1837c6f039f0af735efb6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 2.5E-11 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CH53_2933 63d61c5a7ca1837c6f039f0af735efb6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.5E-11 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CH53_2933 63d61c5a7ca1837c6f039f0af735efb6 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 18-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CH53_2933 63d61c5a7ca1837c6f039f0af735efb6 164 PIRSF PIRSF001467 1 164 1.2E-29 T 18-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CH53_2933 63d61c5a7ca1837c6f039f0af735efb6 164 Gene3D G3DSA:2.40.100.10 1 164 3.5E-71 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily CH53_2933 63d61c5a7ca1837c6f039f0af735efb6 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 5.7E-48 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CH53_2933 63d61c5a7ca1837c6f039f0af735efb6 164 SUPERFAMILY SSF50891 1 162 3.07E-59 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily CH53_383 7057d68f2f8fb7af4b0761e2eb8ef5e8 309 Gene3D G3DSA:3.40.190.10 168 261 2.7E-60 T 18-10-2018 CH53_383 7057d68f2f8fb7af4b0761e2eb8ef5e8 309 Gene3D G3DSA:3.40.190.10 103 268 2.7E-60 T 18-10-2018 CH53_383 7057d68f2f8fb7af4b0761e2eb8ef5e8 309 SUPERFAMILY SSF53850 96 285 1.25E-29 T 18-10-2018 CH53_383 7057d68f2f8fb7af4b0761e2eb8ef5e8 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 2.2E-17 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_383 7057d68f2f8fb7af4b0761e2eb8ef5e8 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 3.4E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_383 7057d68f2f8fb7af4b0761e2eb8ef5e8 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 3.4E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_383 7057d68f2f8fb7af4b0761e2eb8ef5e8 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 3.4E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_383 7057d68f2f8fb7af4b0761e2eb8ef5e8 309 Gene3D G3DSA:1.10.10.10 8 92 3.0E-23 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_383 7057d68f2f8fb7af4b0761e2eb8ef5e8 309 Pfam PF03466 LysR substrate binding domain 97 276 1.9E-28 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_383 7057d68f2f8fb7af4b0761e2eb8ef5e8 309 SUPERFAMILY SSF46785 9 89 5.99E-21 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1056 cc882ad6b51f937d3b6f06543afe4c53 434 Gene3D G3DSA:3.10.50.40 283 385 2.2E-86 T 18-10-2018 CH53_1056 cc882ad6b51f937d3b6f06543afe4c53 434 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.214 T 18-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 CH53_1056 cc882ad6b51f937d3b6f06543afe4c53 434 SUPERFAMILY SSF109998 25 200 6.04E-44 T 18-10-2018 IPR027304 Trigger factor/SurA domain superfamily CH53_1056 cc882ad6b51f937d3b6f06543afe4c53 434 SUPERFAMILY SSF54534 173 277 3.6E-28 T 18-10-2018 CH53_1056 cc882ad6b51f937d3b6f06543afe4c53 434 Gene3D G3DSA:3.10.50.40 175 386 2.2E-86 T 18-10-2018 CH53_1056 cc882ad6b51f937d3b6f06543afe4c53 434 Pfam PF09312 SurA N-terminal domain 25 142 1.4E-45 T 18-10-2018 IPR015391 SurA N-terminal CH53_1056 cc882ad6b51f937d3b6f06543afe4c53 434 Pfam PF00639 PPIC-type PPIASE domain 289 381 2.7E-25 T 18-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 CH53_1056 cc882ad6b51f937d3b6f06543afe4c53 434 Pfam PF00639 PPIC-type PPIASE domain 178 272 3.3E-20 T 18-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 CH53_1056 cc882ad6b51f937d3b6f06543afe4c53 434 Gene3D G3DSA:1.10.4030.10 21 148 1.1E-43 T 18-10-2018 CH53_1056 cc882ad6b51f937d3b6f06543afe4c53 434 SUPERFAMILY SSF54534 283 385 8.5E-33 T 18-10-2018 CH53_1065 3615515153dea375fbba57c99e58349d 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.355 T 18-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1065 3615515153dea375fbba57c99e58349d 1077 Gene3D G3DSA:3.40.50.20 1 116 1.3E-50 T 18-10-2018 CH53_1065 3615515153dea375fbba57c99e58349d 1077 Gene3D G3DSA:3.30.470.20 119 403 1.0E-132 T 18-10-2018 CH53_1065 3615515153dea375fbba57c99e58349d 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CH53_1065 3615515153dea375fbba57c99e58349d 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.3E-39 T 18-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1065 3615515153dea375fbba57c99e58349d 1077 SUPERFAMILY SSF52440 1 127 6.47E-50 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CH53_1065 3615515153dea375fbba57c99e58349d 1077 Gene3D G3DSA:1.10.1030.10 404 521 2.6E-38 T 18-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1065 3615515153dea375fbba57c99e58349d 1077 SUPERFAMILY SSF52335 939 1071 1.26E-34 T 18-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CH53_1065 3615515153dea375fbba57c99e58349d 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CH53_1065 3615515153dea375fbba57c99e58349d 1077 Gene3D G3DSA:3.40.50.1380 937 1073 2.2E-35 T 18-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CH53_1065 3615515153dea375fbba57c99e58349d 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.9E-64 T 18-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1065 3615515153dea375fbba57c99e58349d 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.9E-64 T 18-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1065 3615515153dea375fbba57c99e58349d 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.9E-64 T 18-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1065 3615515153dea375fbba57c99e58349d 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.9E-64 T 18-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1065 3615515153dea375fbba57c99e58349d 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.9E-64 T 18-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1065 3615515153dea375fbba57c99e58349d 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.9E-64 T 18-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1065 3615515153dea375fbba57c99e58349d 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.9E-64 T 18-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1065 3615515153dea375fbba57c99e58349d 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 18-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1065 3615515153dea375fbba57c99e58349d 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.162 T 18-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1065 3615515153dea375fbba57c99e58349d 1077 SUPERFAMILY SSF56059 128 401 1.38E-109 T 18-10-2018 CH53_1065 3615515153dea375fbba57c99e58349d 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.4E-76 T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CH53_1065 3615515153dea375fbba57c99e58349d 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 4.3E-37 T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CH53_1065 3615515153dea375fbba57c99e58349d 1077 Pfam PF02142 MGS-like domain 957 1041 4.7E-18 T 18-10-2018 IPR011607 Methylglyoxal synthase-like domain CH53_1065 3615515153dea375fbba57c99e58349d 1077 Gene3D G3DSA:3.40.50.20 524 663 4.1E-64 T 18-10-2018 CH53_1065 3615515153dea375fbba57c99e58349d 1077 SUPERFAMILY SSF56059 674 934 4.42E-104 T 18-10-2018 CH53_1065 3615515153dea375fbba57c99e58349d 1077 Gene3D G3DSA:3.30.470.20 666 936 4.9E-125 T 18-10-2018 CH53_1065 3615515153dea375fbba57c99e58349d 1077 SUPERFAMILY SSF52440 558 676 1.4E-48 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CH53_1065 3615515153dea375fbba57c99e58349d 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CH53_1065 3615515153dea375fbba57c99e58349d 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CH53_1065 3615515153dea375fbba57c99e58349d 1077 SUPERFAMILY SSF48108 396 554 4.97E-53 T 18-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1065 3615515153dea375fbba57c99e58349d 1077 SMART SM00851 956 1042 1.3E-30 T 18-10-2018 IPR011607 Methylglyoxal synthase-like domain CH53_1065 3615515153dea375fbba57c99e58349d 1077 SMART SM01096 424 547 2.4E-74 T 18-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_875 5470e8f938aa68c528517056979bc2f0 443 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 18-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CH53_875 5470e8f938aa68c528517056979bc2f0 443 SUPERFAMILY SSF53686 73 437 7.27E-53 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH53_875 5470e8f938aa68c528517056979bc2f0 443 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 443 272.348 T 18-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 CH53_875 5470e8f938aa68c528517056979bc2f0 443 Gene3D G3DSA:3.40.50.1100 24 438 6.2E-195 T 18-10-2018 CH53_875 5470e8f938aa68c528517056979bc2f0 443 Gene3D G3DSA:3.40.50.1100 116 238 6.2E-195 T 18-10-2018 CH53_875 5470e8f938aa68c528517056979bc2f0 443 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 91 400 4.8E-59 T 18-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CH53_875 5470e8f938aa68c528517056979bc2f0 443 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 10 438 2.9E-224 T 18-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 CH53_208 07b631dd18d6847672ffee000e4566c7 87 PRINTS PR00160 Glutaredoxin signature 66 79 3.4E-12 T 18-10-2018 IPR014025 Glutaredoxin subgroup CH53_208 07b631dd18d6847672ffee000e4566c7 87 PRINTS PR00160 Glutaredoxin signature 52 65 3.4E-12 T 18-10-2018 IPR014025 Glutaredoxin subgroup CH53_208 07b631dd18d6847672ffee000e4566c7 87 PRINTS PR00160 Glutaredoxin signature 3 21 3.4E-12 T 18-10-2018 IPR014025 Glutaredoxin subgroup CH53_208 07b631dd18d6847672ffee000e4566c7 87 SUPERFAMILY SSF52833 4 82 4.01E-21 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_208 07b631dd18d6847672ffee000e4566c7 87 Pfam PF00462 Glutaredoxin 4 69 3.0E-17 T 18-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CH53_208 07b631dd18d6847672ffee000e4566c7 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 86 4.9E-51 T 18-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 CH53_208 07b631dd18d6847672ffee000e4566c7 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 18-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CH53_208 07b631dd18d6847672ffee000e4566c7 87 Gene3D G3DSA:3.40.30.10 3 85 1.4E-25 T 18-10-2018 CH53_3210 093c383e38a4fa32529eb7d98dc8b904 113 Pfam PF01844 HNH endonuclease 27 75 3.0E-10 T 18-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CH53_3210 093c383e38a4fa32529eb7d98dc8b904 113 SMART SM00507 15 70 3.5E-4 T 18-10-2018 IPR003615 HNH nuclease CH53_3507 9cb30068c015b6706e255cdb7fc08b92 270 Hamap MF_01593 Protein MtfA [mtfA]. 1 265 65.109 T 18-10-2018 IPR010384 MtfA family CH53_3507 9cb30068c015b6706e255cdb7fc08b92 270 Pfam PF06167 Glucose-regulated metallo-peptidase M90 11 243 1.5E-64 T 18-10-2018 IPR010384 MtfA family CH53_3507 9cb30068c015b6706e255cdb7fc08b92 270 Gene3D G3DSA:3.40.390.10 140 266 5.6E-41 T 18-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 CH53_3507 9cb30068c015b6706e255cdb7fc08b92 270 SUPERFAMILY SSF55486 33 245 6.88E-41 T 18-10-2018 CH53_3507 9cb30068c015b6706e255cdb7fc08b92 270 Gene3D G3DSA:1.10.472.150 16 139 9.5E-42 T 18-10-2018 CH53_1777 3b6d5508015f6abbeee90aa76f09ee53 206 Pfam PF02527 rRNA small subunit methyltransferase G 23 201 6.2E-62 T 18-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CH53_1777 3b6d5508015f6abbeee90aa76f09ee53 206 SUPERFAMILY SSF53335 5 204 5.93E-40 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_1777 3b6d5508015f6abbeee90aa76f09ee53 206 Gene3D G3DSA:3.40.50.150 1 206 2.0E-70 T 18-10-2018 CH53_1777 3b6d5508015f6abbeee90aa76f09ee53 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 202 28.598 T 18-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CH53_1777 3b6d5508015f6abbeee90aa76f09ee53 206 PIRSF PIRSF003078 1 206 5.2E-62 T 18-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CH53_1777 3b6d5508015f6abbeee90aa76f09ee53 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 204 1.5E-58 T 18-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CH53_3455 fbf10a060c0c2396f5e8872037af1322 325 Gene3D G3DSA:3.40.190.170 28 325 5.3E-112 T 18-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily CH53_3455 fbf10a060c0c2396f5e8872037af1322 325 PIRSF PIRSF006470 5 325 1.4E-96 T 18-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 CH53_3455 fbf10a060c0c2396f5e8872037af1322 325 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 310 7.5E-70 T 18-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 CH53_3455 fbf10a060c0c2396f5e8872037af1322 325 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 34 286 1.3E-62 T 18-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 CH53_1264 de0cba992012ec79769e9c7822886378 147 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 6 143 35.546 T 18-10-2018 IPR011194 Uncharacterised protein family UPF0306 CH53_1264 de0cba992012ec79769e9c7822886378 147 SUPERFAMILY SSF50475 10 139 1.66E-11 T 18-10-2018 CH53_1264 de0cba992012ec79769e9c7822886378 147 Gene3D G3DSA:2.30.110.10 2 142 4.6E-8 T 18-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CH53_1264 de0cba992012ec79769e9c7822886378 147 PIRSF PIRSF009554 3 147 7.8E-63 T 18-10-2018 IPR011194 Uncharacterised protein family UPF0306 CH53_2022 9095e985693c83f68146335f8c8962c4 775 PRINTS PR00941 Cadmium-transporting ATPase signature 255 275 4.2E-8 T 18-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CH53_2022 9095e985693c83f68146335f8c8962c4 775 PRINTS PR00941 Cadmium-transporting ATPase signature 275 291 4.2E-8 T 18-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CH53_2022 9095e985693c83f68146335f8c8962c4 775 PRINTS PR00941 Cadmium-transporting ATPase signature 336 352 4.2E-8 T 18-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CH53_2022 9095e985693c83f68146335f8c8962c4 775 PRINTS PR00941 Cadmium-transporting ATPase signature 96 117 4.2E-8 T 18-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CH53_2022 9095e985693c83f68146335f8c8962c4 775 PRINTS PR00941 Cadmium-transporting ATPase signature 85 94 4.2E-8 T 18-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CH53_2022 9095e985693c83f68146335f8c8962c4 775 SUPERFAMILY SSF81665 223 754 4.71E-17 T 18-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CH53_2022 9095e985693c83f68146335f8c8962c4 775 Gene3D G3DSA:3.30.70.100 80 150 9.4E-17 T 18-10-2018 CH53_2022 9095e985693c83f68146335f8c8962c4 775 SUPERFAMILY SSF55008 81 145 3.14E-14 T 18-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CH53_2022 9095e985693c83f68146335f8c8962c4 775 SUPERFAMILY SSF56784 469 767 2.12E-51 T 18-10-2018 IPR036412 HAD-like superfamily CH53_2022 9095e985693c83f68146335f8c8962c4 775 Pfam PF00122 E1-E2 ATPase 271 450 1.2E-45 T 18-10-2018 CH53_2022 9095e985693c83f68146335f8c8962c4 775 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 243 745 1.2E-78 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_2022 9095e985693c83f68146335f8c8962c4 775 ProSitePatterns PS01229 Hypothetical cof family signature 2. 667 689 - T 18-10-2018 CH53_2022 9095e985693c83f68146335f8c8962c4 775 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 473 479 - T 18-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CH53_2022 9095e985693c83f68146335f8c8962c4 775 SUPERFAMILY SSF81653 273 370 8.37E-21 T 18-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CH53_2022 9095e985693c83f68146335f8c8962c4 775 Pfam PF00403 Heavy-metal-associated domain 86 142 9.7E-11 T 18-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CH53_2022 9095e985693c83f68146335f8c8962c4 775 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 220 524 3.8E-94 T 18-10-2018 CH53_2022 9095e985693c83f68146335f8c8962c4 775 Gene3D G3DSA:2.70.150.20 270 375 1.6E-31 T 18-10-2018 CH53_2022 9095e985693c83f68146335f8c8962c4 775 Gene3D G3DSA:3.40.50.1000 452 718 1.1E-81 T 18-10-2018 IPR023214 HAD superfamily CH53_2022 9095e985693c83f68146335f8c8962c4 775 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 220 769 1.2E-175 T 18-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CH53_2022 9095e985693c83f68146335f8c8962c4 775 ProSitePatterns PS01047 Heavy-metal-associated domain. 87 116 - T 18-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CH53_2022 9095e985693c83f68146335f8c8962c4 775 Pfam PF00702 haloacid dehalogenase-like hydrolase 467 680 2.2E-37 T 18-10-2018 CH53_2022 9095e985693c83f68146335f8c8962c4 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 616 626 6.8E-29 T 18-10-2018 CH53_2022 9095e985693c83f68146335f8c8962c4 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 320 334 6.8E-29 T 18-10-2018 CH53_2022 9095e985693c83f68146335f8c8962c4 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 690 702 6.8E-29 T 18-10-2018 CH53_2022 9095e985693c83f68146335f8c8962c4 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 594 605 6.8E-29 T 18-10-2018 CH53_2022 9095e985693c83f68146335f8c8962c4 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 471 485 6.8E-29 T 18-10-2018 CH53_2022 9095e985693c83f68146335f8c8962c4 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 667 686 6.8E-29 T 18-10-2018 CH53_2022 9095e985693c83f68146335f8c8962c4 775 Gene3D G3DSA:3.40.1110.10 482 601 1.1E-81 T 18-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CH53_591 c32abb42b99d696b31c2dca37d9574f8 728 SUPERFAMILY SSF75011 119 368 9.81E-10 T 18-10-2018 CH53_591 c32abb42b99d696b31c2dca37d9574f8 728 SUPERFAMILY SSF161098 510 711 1.96E-20 T 18-10-2018 IPR035906 MetI-like superfamily CH53_591 c32abb42b99d696b31c2dca37d9574f8 728 SUPERFAMILY SSF161098 417 498 3.6E-6 T 18-10-2018 IPR035906 MetI-like superfamily CH53_591 c32abb42b99d696b31c2dca37d9574f8 728 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 446 718 3.1E-11 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_2052 f8f35d2e05d415075598e2dcdb903e09 758 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 310 1.2E-125 T 18-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CH53_2052 f8f35d2e05d415075598e2dcdb903e09 758 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 756 0.0 T 18-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CH53_2052 f8f35d2e05d415075598e2dcdb903e09 758 SUPERFAMILY SSF51726 394 756 6.28E-119 T 18-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CH53_2052 f8f35d2e05d415075598e2dcdb903e09 758 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 756 37.488 T 18-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CH53_2052 f8f35d2e05d415075598e2dcdb903e09 758 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 429 751 5.4E-160 T 18-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CH53_2052 f8f35d2e05d415075598e2dcdb903e09 758 Gene3D G3DSA:3.20.20.210 387 754 0.0 T 18-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CH53_2052 f8f35d2e05d415075598e2dcdb903e09 758 SUPERFAMILY SSF51726 5 392 5.49E-112 T 18-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CH53_2052 f8f35d2e05d415075598e2dcdb903e09 758 Gene3D G3DSA:3.20.20.210 7 522 0.0 T 18-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CH53_2052 f8f35d2e05d415075598e2dcdb903e09 758 PIRSF PIRSF000382 2 758 0.0 T 18-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CH53_2416 eb8f70a692eefac0f48e537e143690a6 761 Pfam PF01300 Telomere recombination 210 386 3.0E-48 T 18-10-2018 IPR006070 YrdC-like domain GO:0003725 CH53_2416 eb8f70a692eefac0f48e537e143690a6 761 Gene3D G3DSA:3.30.420.350 491 742 8.5E-128 T 18-10-2018 CH53_2416 eb8f70a692eefac0f48e537e143690a6 761 ProSitePatterns PS01016 Glycoprotease family signature. 476 496 - T 18-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 CH53_2416 eb8f70a692eefac0f48e537e143690a6 761 SUPERFAMILY SSF54975 6 89 5.89E-18 T 18-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CH53_2416 eb8f70a692eefac0f48e537e143690a6 761 SUPERFAMILY SSF53067 608 755 1.69E-6 T 18-10-2018 CH53_2416 eb8f70a692eefac0f48e537e143690a6 761 SUPERFAMILY SSF55821 174 391 2.2E-48 T 18-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CH53_2416 eb8f70a692eefac0f48e537e143690a6 761 Pfam PF00708 Acylphosphatase 8 89 2.0E-15 T 18-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CH53_2416 eb8f70a692eefac0f48e537e143690a6 761 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 8 754 2.9E-257 T 18-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 CH53_2416 eb8f70a692eefac0f48e537e143690a6 761 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 18-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CH53_2416 eb8f70a692eefac0f48e537e143690a6 761 Gene3D G3DSA:3.30.110.120 253 373 5.7E-138 T 18-10-2018 CH53_2416 eb8f70a692eefac0f48e537e143690a6 761 PIRSF PIRSF006256 2 761 1.1E-269 T 18-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 CH53_2416 eb8f70a692eefac0f48e537e143690a6 761 Gene3D G3DSA:3.90.870.50 8 364 5.7E-138 T 18-10-2018 CH53_2416 eb8f70a692eefac0f48e537e143690a6 761 Pfam PF07503 HypF finger 157 189 1.2E-16 T 18-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 CH53_2416 eb8f70a692eefac0f48e537e143690a6 761 Pfam PF07503 HypF finger 107 140 9.3E-17 T 18-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 CH53_2416 eb8f70a692eefac0f48e537e143690a6 761 Gene3D G3DSA:3.30.420.360 385 754 8.5E-128 T 18-10-2018 CH53_427 b5a93fa0701e4fdde1d6be58a94f04a4 335 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 178 333 1.8E-45 T 18-10-2018 IPR000160 GGDEF domain CH53_427 b5a93fa0701e4fdde1d6be58a94f04a4 335 Gene3D G3DSA:3.30.70.270 168 334 4.8E-48 T 18-10-2018 CH53_427 b5a93fa0701e4fdde1d6be58a94f04a4 335 SMART SM00091 18 86 4.2E-4 T 18-10-2018 IPR000014 PAS domain CH53_427 b5a93fa0701e4fdde1d6be58a94f04a4 335 SMART SM00267 165 334 1.7E-46 T 18-10-2018 IPR000160 GGDEF domain CH53_427 b5a93fa0701e4fdde1d6be58a94f04a4 335 SUPERFAMILY SSF55073 184 333 2.43E-42 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_427 b5a93fa0701e4fdde1d6be58a94f04a4 335 Pfam PF00990 Diguanylate cyclase, GGDEF domain 180 331 2.4E-41 T 18-10-2018 IPR000160 GGDEF domain CH53_427 b5a93fa0701e4fdde1d6be58a94f04a4 335 Gene3D G3DSA:3.30.450.20 15 131 1.5E-30 T 18-10-2018 CH53_427 b5a93fa0701e4fdde1d6be58a94f04a4 335 Pfam PF08447 PAS fold 41 129 1.1E-24 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 CH53_427 b5a93fa0701e4fdde1d6be58a94f04a4 335 SUPERFAMILY SSF55785 23 138 2.09E-24 T 18-10-2018 IPR035965 PAS domain superfamily CH53_427 b5a93fa0701e4fdde1d6be58a94f04a4 335 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 143 2.2E-12 T 18-10-2018 IPR000014 PAS domain CH53_427 b5a93fa0701e4fdde1d6be58a94f04a4 335 SMART SM00086 93 136 1.9E-7 T 18-10-2018 IPR001610 PAC motif CH53_1928 f7371eba8043a16be271462d472344b0 466 SUPERFAMILY SSF55424 345 463 3.61E-30 T 18-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CH53_1928 f7371eba8043a16be271462d472344b0 466 Gene3D G3DSA:3.30.390.30 345 464 5.6E-32 T 18-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CH53_1928 f7371eba8043a16be271462d472344b0 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.3E-28 T 18-10-2018 CH53_1928 f7371eba8043a16be271462d472344b0 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 2.3E-28 T 18-10-2018 CH53_1928 f7371eba8043a16be271462d472344b0 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.3E-28 T 18-10-2018 CH53_1928 f7371eba8043a16be271462d472344b0 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.3E-28 T 18-10-2018 CH53_1928 f7371eba8043a16be271462d472344b0 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.3E-28 T 18-10-2018 CH53_1928 f7371eba8043a16be271462d472344b0 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 66.564 T 18-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 CH53_1928 f7371eba8043a16be271462d472344b0 466 PIRSF PIRSF000350 1 463 8.0E-72 T 18-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CH53_1928 f7371eba8043a16be271462d472344b0 466 SUPERFAMILY SSF51905 1 322 1.69E-56 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1928 f7371eba8043a16be271462d472344b0 466 Gene3D G3DSA:3.50.50.60 158 276 4.9E-95 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1928 f7371eba8043a16be271462d472344b0 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 326 7.5E-59 T 18-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CH53_1928 f7371eba8043a16be271462d472344b0 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 3.8E-30 T 18-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CH53_1928 f7371eba8043a16be271462d472344b0 466 Gene3D G3DSA:3.50.50.60 7 332 4.9E-95 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1928 f7371eba8043a16be271462d472344b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.3E-52 T 18-10-2018 CH53_1928 f7371eba8043a16be271462d472344b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.3E-52 T 18-10-2018 CH53_1928 f7371eba8043a16be271462d472344b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.3E-52 T 18-10-2018 CH53_1928 f7371eba8043a16be271462d472344b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.3E-52 T 18-10-2018 CH53_1928 f7371eba8043a16be271462d472344b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.3E-52 T 18-10-2018 CH53_1928 f7371eba8043a16be271462d472344b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.3E-52 T 18-10-2018 CH53_1928 f7371eba8043a16be271462d472344b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.3E-52 T 18-10-2018 CH53_1928 f7371eba8043a16be271462d472344b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.3E-52 T 18-10-2018 CH53_1928 f7371eba8043a16be271462d472344b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.3E-52 T 18-10-2018 CH53_3047 69b648180b5d19b06e1112c0123eb522 590 SUPERFAMILY SSF90123 5 324 3.66E-57 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_3047 69b648180b5d19b06e1112c0123eb522 590 SUPERFAMILY SSF52540 335 582 3.35E-91 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3047 69b648180b5d19b06e1112c0123eb522 590 Pfam PF00664 ABC transporter transmembrane region 27 300 2.0E-36 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CH53_3047 69b648180b5d19b06e1112c0123eb522 590 Pfam PF00005 ABC transporter 362 511 3.2E-33 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3047 69b648180b5d19b06e1112c0123eb522 590 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3047 69b648180b5d19b06e1112c0123eb522 590 Gene3D G3DSA:1.20.1560.10 13 335 1.0E-110 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_3047 69b648180b5d19b06e1112c0123eb522 590 Gene3D G3DSA:3.40.50.300 337 590 1.7E-94 T 18-10-2018 CH53_3047 69b648180b5d19b06e1112c0123eb522 590 SMART SM00382 371 563 1.8E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 SUPERFAMILY SSF51230 204 296 3.53E-23 T 18-10-2018 IPR011053 Single hybrid motif CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 Pfam PF02817 e3 binding domain 321 356 5.3E-15 T 18-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 SUPERFAMILY SSF52777 383 624 2.58E-79 T 18-10-2018 CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 SUPERFAMILY SSF51230 1 93 3.93E-23 T 18-10-2018 IPR011053 Single hybrid motif CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 18-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 Gene3D G3DSA:3.30.559.10 377 625 1.2E-99 T 18-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 227 256 - T 18-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 18-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 183 625 8.6E-222 T 18-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 Gene3D G3DSA:2.40.50.100 1 80 2.7E-21 T 18-10-2018 CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 Gene3D G3DSA:2.40.50.100 203 282 6.9E-21 T 18-10-2018 CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 Gene3D G3DSA:2.40.50.100 104 181 7.3E-21 T 18-10-2018 CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 Gene3D G3DSA:4.10.320.10 321 366 4.5E-22 T 18-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 Pfam PF00364 Biotin-requiring enzyme 206 275 8.5E-22 T 18-10-2018 IPR000089 Biotin/lipoyl attachment CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 Pfam PF00364 Biotin-requiring enzyme 106 175 7.6E-22 T 18-10-2018 IPR000089 Biotin/lipoyl attachment CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 Pfam PF00364 Biotin-requiring enzyme 4 73 2.2E-21 T 18-10-2018 IPR000089 Biotin/lipoyl attachment CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 394 624 1.7E-79 T 18-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 SUPERFAMILY SSF51230 104 195 6.94E-23 T 18-10-2018 IPR011053 Single hybrid motif CH53_994 0d27e496783c5d2d1a1fdcd7babf8388 625 SUPERFAMILY SSF47005 315 360 2.75E-13 T 18-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CH53_3245 91c6edb6f1787150c1cd381081889fca 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 2.1E-12 T 18-10-2018 IPR002177 DNA-binding protein Dps CH53_3245 91c6edb6f1787150c1cd381081889fca 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 2.1E-12 T 18-10-2018 IPR002177 DNA-binding protein Dps CH53_3245 91c6edb6f1787150c1cd381081889fca 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 2.1E-12 T 18-10-2018 IPR002177 DNA-binding protein Dps CH53_3245 91c6edb6f1787150c1cd381081889fca 167 Gene3D G3DSA:1.20.1260.10 1 167 5.5E-51 T 18-10-2018 IPR012347 Ferritin-like CH53_3245 91c6edb6f1787150c1cd381081889fca 167 SUPERFAMILY SSF47240 11 167 1.29E-44 T 18-10-2018 IPR009078 Ferritin-like superfamily CH53_3245 91c6edb6f1787150c1cd381081889fca 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 45.126 T 18-10-2018 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 CH53_3245 91c6edb6f1787150c1cd381081889fca 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 18-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CH53_3245 91c6edb6f1787150c1cd381081889fca 167 Pfam PF00210 Ferritin-like domain 31 166 2.3E-21 T 18-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CH53_3245 91c6edb6f1787150c1cd381081889fca 167 PIRSF PIRSF005900 8 167 2.7E-40 T 18-10-2018 IPR002177 DNA-binding protein Dps CH53_3963 7fd72a19ad042906153c11596b6f3fa0 294 PRINTS PR00118 Beta-lactamase class A signature 147 171 1.0E-69 T 18-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CH53_3963 7fd72a19ad042906153c11596b6f3fa0 294 PRINTS PR00118 Beta-lactamase class A signature 226 241 1.0E-69 T 18-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CH53_3963 7fd72a19ad042906153c11596b6f3fa0 294 PRINTS PR00118 Beta-lactamase class A signature 111 136 1.0E-69 T 18-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CH53_3963 7fd72a19ad042906153c11596b6f3fa0 294 PRINTS PR00118 Beta-lactamase class A signature 209 224 1.0E-69 T 18-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CH53_3963 7fd72a19ad042906153c11596b6f3fa0 294 PRINTS PR00118 Beta-lactamase class A signature 69 86 1.0E-69 T 18-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CH53_3963 7fd72a19ad042906153c11596b6f3fa0 294 PRINTS PR00118 Beta-lactamase class A signature 173 198 1.0E-69 T 18-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CH53_3963 7fd72a19ad042906153c11596b6f3fa0 294 PRINTS PR00118 Beta-lactamase class A signature 38 62 1.0E-69 T 18-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CH53_3963 7fd72a19ad042906153c11596b6f3fa0 294 Pfam PF13354 Beta-lactamase enzyme family 60 266 1.6E-39 T 18-10-2018 CH53_3963 7fd72a19ad042906153c11596b6f3fa0 294 SUPERFAMILY SSF56601 34 293 5.12E-79 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CH53_3963 7fd72a19ad042906153c11596b6f3fa0 294 Gene3D G3DSA:3.40.710.10 33 294 1.0E-76 T 18-10-2018 CH53_3963 7fd72a19ad042906153c11596b6f3fa0 294 ProSitePatterns PS00146 Beta-lactamase class-A active site. 71 86 - T 18-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 CH53_2909 e19ad54a4651dfb30e59ef4aa9dd2db7 364 Pfam PF13439 Glycosyltransferase Family 4 15 170 8.4E-15 T 18-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CH53_2909 e19ad54a4651dfb30e59ef4aa9dd2db7 364 Gene3D G3DSA:3.40.50.2000 15 347 1.6E-66 T 18-10-2018 CH53_2909 e19ad54a4651dfb30e59ef4aa9dd2db7 364 Pfam PF00534 Glycosyl transferases group 1 175 331 2.7E-38 T 18-10-2018 IPR001296 Glycosyl transferase, family 1 CH53_2909 e19ad54a4651dfb30e59ef4aa9dd2db7 364 Gene3D G3DSA:3.40.50.2000 170 341 1.6E-66 T 18-10-2018 CH53_2909 e19ad54a4651dfb30e59ef4aa9dd2db7 364 SUPERFAMILY SSF53756 3 355 1.61E-75 T 18-10-2018 CH53_1215 ae533ee3c389c8f6c13b378dac294c76 136 Pfam PF00589 Phage integrase family 2 105 5.6E-11 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CH53_1215 ae533ee3c389c8f6c13b378dac294c76 136 SUPERFAMILY SSF56349 2 112 5.3E-19 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CH53_1215 ae533ee3c389c8f6c13b378dac294c76 136 Gene3D G3DSA:1.10.443.10 1 120 5.8E-10 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CH53_2690 d47184f778df34533fe60b48337d85f3 145 Pfam PF10713 Protein of unknown function (DUF2509) 7 143 6.4E-43 T 18-10-2018 IPR019652 Protein of unknown function DUF2509 CH53_350 7a081722bf2e17b2c460182b3f6eb95a 402 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 18-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site CH53_350 7a081722bf2e17b2c460182b3f6eb95a 402 Pfam PF03222 Tryptophan/tyrosine permease family 3 389 6.0E-135 T 18-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CH53_350 7a081722bf2e17b2c460182b3f6eb95a 402 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 383 2.5E-137 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_350 7a081722bf2e17b2c460182b3f6eb95a 402 Gene3D G3DSA:1.20.1740.10 2 400 5.0E-6 T 18-10-2018 CH53_350 7a081722bf2e17b2c460182b3f6eb95a 402 PRINTS PR00166 Aromatic amino acid permease signature 148 168 1.1E-89 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_350 7a081722bf2e17b2c460182b3f6eb95a 402 PRINTS PR00166 Aromatic amino acid permease signature 37 56 1.1E-89 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_350 7a081722bf2e17b2c460182b3f6eb95a 402 PRINTS PR00166 Aromatic amino acid permease signature 82 102 1.1E-89 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_350 7a081722bf2e17b2c460182b3f6eb95a 402 PRINTS PR00166 Aromatic amino acid permease signature 282 301 1.1E-89 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_350 7a081722bf2e17b2c460182b3f6eb95a 402 PRINTS PR00166 Aromatic amino acid permease signature 10 33 1.1E-89 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_350 7a081722bf2e17b2c460182b3f6eb95a 402 PRINTS PR00166 Aromatic amino acid permease signature 182 204 1.1E-89 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_350 7a081722bf2e17b2c460182b3f6eb95a 402 PRINTS PR00166 Aromatic amino acid permease signature 221 240 1.1E-89 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_350 7a081722bf2e17b2c460182b3f6eb95a 402 PRINTS PR00166 Aromatic amino acid permease signature 316 334 1.1E-89 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_350 7a081722bf2e17b2c460182b3f6eb95a 402 PRINTS PR00166 Aromatic amino acid permease signature 337 356 1.1E-89 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_975 6dfa33b95acd6876704dedfc3ed81556 265 SUPERFAMILY SSF51621 4 264 1.35E-103 T 18-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CH53_975 6dfa33b95acd6876704dedfc3ed81556 265 PIRSF PIRSF000388 1 265 7.5E-99 T 18-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CH53_975 6dfa33b95acd6876704dedfc3ed81556 265 Gene3D G3DSA:3.20.20.60 1 264 9.7E-104 T 18-10-2018 CH53_975 6dfa33b95acd6876704dedfc3ed81556 265 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 264 41.896 T 18-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CH53_975 6dfa33b95acd6876704dedfc3ed81556 265 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 259 2.3E-104 T 18-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CH53_975 6dfa33b95acd6876704dedfc3ed81556 265 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 265 7.7E-118 T 18-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CH53_2993 e16ea9584799e1c41fff77535e476cb2 416 SUPERFAMILY SSF56849 27 239 3.4E-29 T 18-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 CH53_2993 e16ea9584799e1c41fff77535e476cb2 416 Pfam PF03945 delta endotoxin, N-terminal domain 39 206 1.6E-7 T 18-10-2018 IPR005639 Pesticidal crystal protein, N-terminal GO:0009405|GO:0090729 CH53_2993 e16ea9584799e1c41fff77535e476cb2 416 Gene3D G3DSA:1.20.190.10 18 249 1.1E-51 T 18-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 CH53_1621 ea353b5e05518117eb97c8c9e587eda4 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 262 275 - T 18-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CH53_1621 ea353b5e05518117eb97c8c9e587eda4 314 Pfam PF00294 pfkB family carbohydrate kinase 4 308 2.2E-69 T 18-10-2018 IPR011611 Carbohydrate kinase PfkB CH53_1621 ea353b5e05518117eb97c8c9e587eda4 314 Gene3D G3DSA:3.40.1190.20 1 312 6.1E-88 T 18-10-2018 IPR029056 Ribokinase-like CH53_1621 ea353b5e05518117eb97c8c9e587eda4 314 SUPERFAMILY SSF53613 1 308 2.03E-72 T 18-10-2018 IPR029056 Ribokinase-like CH53_3803 ddc3d7a223173a0ebf9dbea7bcc33c6f 493 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 145 157 - T 18-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CH53_3803 ddc3d7a223173a0ebf9dbea7bcc33c6f 493 Gene3D G3DSA:1.20.1250.20 6 483 2.9E-113 T 18-10-2018 CH53_3803 ddc3d7a223173a0ebf9dbea7bcc33c6f 493 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 3 486 46.123 T 18-10-2018 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B CH53_3803 ddc3d7a223173a0ebf9dbea7bcc33c6f 493 Pfam PF00854 POT family 82 441 2.6E-89 T 18-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 CH53_3803 ddc3d7a223173a0ebf9dbea7bcc33c6f 493 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 483 8.4E-184 T 18-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 CH53_3803 ddc3d7a223173a0ebf9dbea7bcc33c6f 493 SUPERFAMILY SSF103473 9 479 8.76E-28 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_4045 57ad759c091a3fd59d34e1d187805420 110 SUPERFAMILY SSF103481 6 105 7.32E-20 T 18-10-2018 CH53_4045 57ad759c091a3fd59d34e1d187805420 110 Gene3D G3DSA:1.10.3730.20 1 110 3.2E-37 T 18-10-2018 CH53_4045 57ad759c091a3fd59d34e1d187805420 110 Pfam PF00893 Small Multidrug Resistance protein 4 94 1.8E-27 T 18-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CH53_3812 c54ef0203efe83e875ae58a3ede5d18c 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 1.5E-85 T 18-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CH53_3812 c54ef0203efe83e875ae58a3ede5d18c 213 SUPERFAMILY SSF51569 4 209 5.86E-70 T 18-10-2018 CH53_3812 c54ef0203efe83e875ae58a3ede5d18c 213 Pfam PF01081 KDPG and KHG aldolase 9 203 7.4E-91 T 18-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CH53_3812 c54ef0203efe83e875ae58a3ede5d18c 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 18-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CH53_3812 c54ef0203efe83e875ae58a3ede5d18c 213 Gene3D G3DSA:3.20.20.70 1 211 1.0E-74 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3812 c54ef0203efe83e875ae58a3ede5d18c 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 18-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CH53_2611 9e81d8b0fc5b2f173cf79b5e332e6d40 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 57.822 T 18-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria CH53_2611 9e81d8b0fc5b2f173cf79b5e332e6d40 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.9E-8 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2611 9e81d8b0fc5b2f173cf79b5e332e6d40 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.9E-8 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2611 9e81d8b0fc5b2f173cf79b5e332e6d40 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.9E-8 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2611 9e81d8b0fc5b2f173cf79b5e332e6d40 297 SUPERFAMILY SSF46785 4 110 5.75E-17 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2611 9e81d8b0fc5b2f173cf79b5e332e6d40 297 Gene3D G3DSA:1.10.10.10 2 83 1.2E-25 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2611 9e81d8b0fc5b2f173cf79b5e332e6d40 297 Gene3D G3DSA:3.40.190.290 89 294 4.2E-63 T 18-10-2018 CH53_2611 9e81d8b0fc5b2f173cf79b5e332e6d40 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 6.5E-19 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2611 9e81d8b0fc5b2f173cf79b5e332e6d40 297 Pfam PF03466 LysR substrate binding domain 93 287 1.6E-12 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_2611 9e81d8b0fc5b2f173cf79b5e332e6d40 297 SUPERFAMILY SSF53850 92 290 3.62E-19 T 18-10-2018 CH53_2611 9e81d8b0fc5b2f173cf79b5e332e6d40 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 6.9E-111 T 18-10-2018 IPR017685 HTH-type transcriptional regulator ArgP CH53_3276 2595e777d6422dfd004727a35f62be83 180 Pfam PF12800 4Fe-4S binding domain 9 22 0.16 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_3276 2595e777d6422dfd004727a35f62be83 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_3276 2595e777d6422dfd004727a35f62be83 180 SUPERFAMILY SSF54862 1 169 4.02E-42 T 18-10-2018 CH53_3276 2595e777d6422dfd004727a35f62be83 180 Pfam PF00037 4Fe-4S binding domain 82 103 3.6E-8 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_3276 2595e777d6422dfd004727a35f62be83 180 Gene3D G3DSA:3.30.70.20 5 166 2.0E-28 T 18-10-2018 CH53_3276 2595e777d6422dfd004727a35f62be83 180 Gene3D G3DSA:3.30.70.20 63 129 2.0E-28 T 18-10-2018 CH53_336 e074bfe4510fb6fd5059e595d5e6608b 897 SUPERFAMILY SSF47226 795 891 8.9E-19 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_336 e074bfe4510fb6fd5059e595d5e6608b 897 Gene3D G3DSA:3.40.50.11620 683 797 5.0E-41 T 18-10-2018 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily CH53_336 e074bfe4510fb6fd5059e595d5e6608b 897 Pfam PF01627 Hpt domain 812 891 2.1E-9 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CH53_336 e074bfe4510fb6fd5059e595d5e6608b 897 Gene3D G3DSA:1.10.287.130 461 512 1.6E-24 T 18-10-2018 CH53_336 e074bfe4510fb6fd5059e595d5e6608b 897 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 9 892 26.351 T 18-10-2018 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 CH53_336 e074bfe4510fb6fd5059e595d5e6608b 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 653 1.7E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_336 e074bfe4510fb6fd5059e595d5e6608b 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 615 1.7E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_336 e074bfe4510fb6fd5059e595d5e6608b 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 672 1.7E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_336 e074bfe4510fb6fd5059e595d5e6608b 897 Gene3D G3DSA:1.20.120.160 798 894 1.8E-9 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_336 e074bfe4510fb6fd5059e595d5e6608b 897 SMART SM00387 562 675 2.8E-10 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_336 e074bfe4510fb6fd5059e595d5e6608b 897 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 672 1.8E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_336 e074bfe4510fb6fd5059e595d5e6608b 897 Pfam PF16359 RcsD-ABL domain 684 784 3.6E-39 T 18-10-2018 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain CH53_336 e074bfe4510fb6fd5059e595d5e6608b 897 Gene3D G3DSA:3.30.565.10 513 671 1.6E-24 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_336 e074bfe4510fb6fd5059e595d5e6608b 897 SUPERFAMILY SSF47384 436 515 1.33E-5 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_336 e074bfe4510fb6fd5059e595d5e6608b 897 SUPERFAMILY SSF55874 504 673 5.76E-20 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1953 816eb88c3c08363658d3338d166da790 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 44.826 T 18-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CH53_1953 816eb88c3c08363658d3338d166da790 616 SUPERFAMILY SSF52016 421 610 2.2E-58 T 18-10-2018 CH53_1953 816eb88c3c08363658d3338d166da790 616 SUPERFAMILY SSF143975 3 420 7.98E-132 T 18-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CH53_1953 816eb88c3c08363658d3338d166da790 616 Gene3D G3DSA:3.50.30.80 421 573 2.6E-54 T 18-10-2018 CH53_1953 816eb88c3c08363658d3338d166da790 616 Pfam PF00920 Dehydratase family 34 607 7.7E-216 T 18-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CH53_1953 816eb88c3c08363658d3338d166da790 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 6.7E-261 T 18-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CH53_1953 816eb88c3c08363658d3338d166da790 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 18-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CH53_1953 816eb88c3c08363658d3338d166da790 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 18-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CH53_3851 2f2d7c1257051718fb4b5a22a8e118d5 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 5.8E-128 T 18-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 CH53_3851 2f2d7c1257051718fb4b5a22a8e118d5 338 SMART SM00870 5 323 5.4E-138 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CH53_3851 2f2d7c1257051718fb4b5a22a8e118d5 338 Gene3D G3DSA:3.40.50.40 209 338 1.3E-48 T 18-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 CH53_3851 2f2d7c1257051718fb4b5a22a8e118d5 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 4.5E-17 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CH53_3851 2f2d7c1257051718fb4b5a22a8e118d5 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 4.5E-17 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CH53_3851 2f2d7c1257051718fb4b5a22a8e118d5 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 4.5E-17 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CH53_3851 2f2d7c1257051718fb4b5a22a8e118d5 338 Pfam PF00710 Asparaginase, N-terminal 6 186 3.6E-63 T 18-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CH53_3851 2f2d7c1257051718fb4b5a22a8e118d5 338 SUPERFAMILY SSF53774 3 335 1.31E-110 T 18-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 CH53_3851 2f2d7c1257051718fb4b5a22a8e118d5 338 PIRSF PIRSF500176 2 332 1.1E-113 T 18-10-2018 CH53_3851 2f2d7c1257051718fb4b5a22a8e118d5 338 PIRSF PIRSF001220 1 334 3.8E-99 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CH53_3851 2f2d7c1257051718fb4b5a22a8e118d5 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 18-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CH53_3851 2f2d7c1257051718fb4b5a22a8e118d5 338 Gene3D G3DSA:3.40.50.1170 1 208 7.6E-91 T 18-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 CH53_3851 2f2d7c1257051718fb4b5a22a8e118d5 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 18-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CH53_1135 c5aa20370b8953c7f6f16932746c485c 319 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 18-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CH53_1135 c5aa20370b8953c7f6f16932746c485c 319 SUPERFAMILY SSF53613 2 307 9.04E-82 T 18-10-2018 IPR029056 Ribokinase-like CH53_1135 c5aa20370b8953c7f6f16932746c485c 319 Gene3D G3DSA:3.40.1190.20 1 316 1.5E-98 T 18-10-2018 IPR029056 Ribokinase-like CH53_1135 c5aa20370b8953c7f6f16932746c485c 319 PRINTS PR00990 Ribokinase signature 23 42 3.5E-5 T 18-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CH53_1135 c5aa20370b8953c7f6f16932746c485c 319 PRINTS PR00990 Ribokinase signature 216 227 3.5E-5 T 18-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CH53_1135 c5aa20370b8953c7f6f16932746c485c 319 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 28 52 - T 18-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CH53_1135 c5aa20370b8953c7f6f16932746c485c 319 Pfam PF00294 pfkB family carbohydrate kinase 3 299 1.7E-71 T 18-10-2018 IPR011611 Carbohydrate kinase PfkB CH53_1394 4a38549ae6018fdf00315dd22a87dac6 577 Pfam PF00005 ABC transporter 317 445 3.0E-17 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1394 4a38549ae6018fdf00315dd22a87dac6 577 ProSitePatterns PS00211 ABC transporters family signature. 417 431 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1394 4a38549ae6018fdf00315dd22a87dac6 577 Gene3D G3DSA:3.40.50.300 257 499 1.1E-42 T 18-10-2018 CH53_1394 4a38549ae6018fdf00315dd22a87dac6 577 Gene3D G3DSA:3.40.50.300 4 236 7.1E-50 T 18-10-2018 CH53_1394 4a38549ae6018fdf00315dd22a87dac6 577 SUPERFAMILY SSF52540 11 201 4.41E-43 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1394 4a38549ae6018fdf00315dd22a87dac6 577 Pfam PF00005 ABC transporter 21 154 4.3E-25 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1394 4a38549ae6018fdf00315dd22a87dac6 577 SUPERFAMILY SSF52540 296 501 4.48E-34 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1394 4a38549ae6018fdf00315dd22a87dac6 577 SMART SM00382 29 199 2.8E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1394 4a38549ae6018fdf00315dd22a87dac6 577 SMART SM00382 322 490 2.0E-7 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2204 0820aa695e1c01c2ed0d329bb2c7dcbe 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 8.1E-174 T 18-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CH53_2204 0820aa695e1c01c2ed0d329bb2c7dcbe 489 Gene3D G3DSA:3.40.1260.20 402 488 6.3E-6 T 18-10-2018 CH53_2204 0820aa695e1c01c2ed0d329bb2c7dcbe 489 Pfam PF00575 S1 RNA binding domain 38 109 3.2E-6 T 18-10-2018 IPR003029 S1 domain GO:0003676 CH53_2204 0820aa695e1c01c2ed0d329bb2c7dcbe 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.1E-100 T 18-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CH53_2204 0820aa695e1c01c2ed0d329bb2c7dcbe 489 SMART SM00316 37 122 2.1E-9 T 18-10-2018 IPR022967 RNA-binding domain, S1 CH53_2204 0820aa695e1c01c2ed0d329bb2c7dcbe 489 Gene3D G3DSA:2.40.50.140 31 127 4.1E-31 T 18-10-2018 CH53_2204 0820aa695e1c01c2ed0d329bb2c7dcbe 489 SUPERFAMILY SSF50249 39 128 6.0E-19 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_1112 88a60aa9ff2202ab3db9531f03d6d6c2 325 SUPERFAMILY SSF56784 111 316 4.47E-48 T 18-10-2018 IPR036412 HAD-like superfamily CH53_1112 88a60aa9ff2202ab3db9531f03d6d6c2 325 Gene3D G3DSA:3.30.70.2020 38 320 5.9E-118 T 18-10-2018 CH53_1112 88a60aa9ff2202ab3db9531f03d6d6c2 325 Gene3D G3DSA:1.10.150.210 121 183 5.9E-118 T 18-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 CH53_1112 88a60aa9ff2202ab3db9531f03d6d6c2 325 Pfam PF12710 haloacid dehalogenase-like hydrolase 147 282 1.0E-15 T 18-10-2018 CH53_1112 88a60aa9ff2202ab3db9531f03d6d6c2 325 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 283 2.2E-23 T 18-10-2018 CH53_1112 88a60aa9ff2202ab3db9531f03d6d6c2 325 Gene3D G3DSA:3.40.50.1000 107 316 5.9E-118 T 18-10-2018 IPR023214 HAD superfamily CH53_1112 88a60aa9ff2202ab3db9531f03d6d6c2 325 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 98 316 7.6E-88 T 18-10-2018 CH53_829 8fc53011a700b6d7b0c8c1bd227cf178 314 SMART SM00861 1 170 6.4E-29 T 18-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CH53_829 8fc53011a700b6d7b0c8c1bd227cf178 314 SUPERFAMILY SSF52518 6 173 1.84E-36 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_829 8fc53011a700b6d7b0c8c1bd227cf178 314 Gene3D G3DSA:3.40.50.920 181 313 3.2E-33 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CH53_829 8fc53011a700b6d7b0c8c1bd227cf178 314 Pfam PF02780 Transketolase, C-terminal domain 181 303 2.0E-28 T 18-10-2018 IPR033248 Transketolase, C-terminal domain CH53_829 8fc53011a700b6d7b0c8c1bd227cf178 314 Gene3D G3DSA:3.40.50.970 3 177 1.0E-42 T 18-10-2018 CH53_829 8fc53011a700b6d7b0c8c1bd227cf178 314 SUPERFAMILY SSF52922 176 311 1.83E-31 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CH53_829 8fc53011a700b6d7b0c8c1bd227cf178 314 Pfam PF02779 Transketolase, pyrimidine binding domain 28 168 1.6E-18 T 18-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CH53_181 9f4e5163e580da571ec007ab8984206e 553 SUPERFAMILY SSF52540 1 335 3.59E-17 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_181 9f4e5163e580da571ec007ab8984206e 553 Pfam PF11398 Protein of unknown function (DUF2813) 1 376 1.2E-160 T 18-10-2018 IPR022602 Protein of unknown function DUF2813 CH53_181 9f4e5163e580da571ec007ab8984206e 553 Gene3D G3DSA:3.40.50.300 1 349 1.9E-13 T 18-10-2018 CH53_3385 ccbf982fe9b1b30286e21d02e38d5628 93 Pfam PF02553 Cobalt transport protein component CbiN 5 69 4.6E-29 T 18-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 CH53_3385 ccbf982fe9b1b30286e21d02e38d5628 93 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 93 43.517 T 18-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 CH53_3385 ccbf982fe9b1b30286e21d02e38d5628 93 TIGRFAM TIGR01165 cbiN: cobalt transport protein 1 85 8.0E-39 T 18-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 CH53_124 418877b80118be75c45ffda66155f2eb 637 Gene3D G3DSA:3.40.50.300 283 550 1.4E-63 T 18-10-2018 CH53_124 418877b80118be75c45ffda66155f2eb 637 SUPERFAMILY SSF52540 310 501 1.83E-44 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_124 418877b80118be75c45ffda66155f2eb 637 Pfam PF16326 ABC transporter C-terminal domain 564 632 9.1E-21 T 18-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CH53_124 418877b80118be75c45ffda66155f2eb 637 Pfam PF12848 ABC transporter 224 298 1.1E-9 T 18-10-2018 IPR032781 ABC-transporter extension domain CH53_124 418877b80118be75c45ffda66155f2eb 637 Pfam PF00005 ABC transporter 19 185 2.6E-23 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_124 418877b80118be75c45ffda66155f2eb 637 Gene3D G3DSA:3.40.50.300 11 279 3.9E-65 T 18-10-2018 CH53_124 418877b80118be75c45ffda66155f2eb 637 SMART SM00382 28 230 1.2E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_124 418877b80118be75c45ffda66155f2eb 637 SMART SM00382 344 514 1.5E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_124 418877b80118be75c45ffda66155f2eb 637 Pfam PF00005 ABC transporter 336 469 2.4E-24 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_124 418877b80118be75c45ffda66155f2eb 637 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_124 418877b80118be75c45ffda66155f2eb 637 Gene3D G3DSA:1.10.287.380 555 637 1.3E-28 T 18-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CH53_124 418877b80118be75c45ffda66155f2eb 637 SUPERFAMILY SSF52540 4 244 2.06E-48 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_124 418877b80118be75c45ffda66155f2eb 637 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 SMART SM01038 763 1036 6.7E-115 T 18-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 Pfam PF02929 Beta galactosidase small chain 767 1033 8.7E-60 T 18-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 387 412 - T 18-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 Gene3D G3DSA:2.60.40.10 213 335 3.9E-22 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 SUPERFAMILY SSF74650 751 1036 4.55E-95 T 18-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 Gene3D G3DSA:2.70.98.10 748 1038 4.6E-91 T 18-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 SUPERFAMILY SSF49303 623 732 1.37E-28 T 18-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 Hamap MF_01687 Beta-galactosidase [lacZ]. 1 1038 17.533 T 18-10-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 Gene3D G3DSA:3.20.20.80 336 624 2.9E-125 T 18-10-2018 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 SUPERFAMILY SSF51445 337 624 4.3E-99 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 377 395 2.5E-37 T 18-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 449 464 2.5E-37 T 18-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 346 360 2.5E-37 T 18-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 533 548 2.5E-37 T 18-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 140 155 2.5E-37 T 18-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 Pfam PF16353 Domain of unknown function(DUF4981) 641 729 1.1E-16 T 18-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 SUPERFAMILY SSF49785 8 212 5.24E-66 T 18-10-2018 IPR008979 Galactose-binding-like domain superfamily CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 Pfam PF00703 Glycosyl hydrolases family 2 214 335 3.8E-12 T 18-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 449 463 - T 18-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 Gene3D G3DSA:2.60.120.260 1 212 1.3E-79 T 18-10-2018 IPR008979 Galactose-binding-like domain superfamily CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 48 212 4.6E-63 T 18-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 Gene3D G3DSA:2.60.40.10 627 735 3.2E-21 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 337 630 7.9E-114 T 18-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 CH53_3523 6673fcd782697c13f0f79e52279d1872 1039 SUPERFAMILY SSF49303 214 335 4.32E-20 T 18-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily CH53_2128 3d4614517dc22efbc26eb5b8439f15cb 469 SUPERFAMILY SSF52172 4 189 8.54E-50 T 18-10-2018 IPR011006 CheY-like superfamily CH53_2128 3d4614517dc22efbc26eb5b8439f15cb 469 SMART SM00382 165 308 2.6E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2128 3d4614517dc22efbc26eb5b8439f15cb 469 SMART SM00448 5 116 3.0E-40 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_2128 3d4614517dc22efbc26eb5b8439f15cb 469 Gene3D G3DSA:3.40.50.300 136 315 2.1E-66 T 18-10-2018 CH53_2128 3d4614517dc22efbc26eb5b8439f15cb 469 Gene3D G3DSA:3.40.50.2300 1 135 2.5E-40 T 18-10-2018 CH53_2128 3d4614517dc22efbc26eb5b8439f15cb 469 Gene3D G3DSA:1.10.10.60 384 461 1.1E-15 T 18-10-2018 CH53_2128 3d4614517dc22efbc26eb5b8439f15cb 469 Pfam PF00158 Sigma-54 interaction domain 146 311 1.0E-71 T 18-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CH53_2128 3d4614517dc22efbc26eb5b8439f15cb 469 Pfam PF02954 Bacterial regulatory protein, Fis family 419 456 5.2E-11 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_2128 3d4614517dc22efbc26eb5b8439f15cb 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 439 1.4E-8 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_2128 3d4614517dc22efbc26eb5b8439f15cb 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 459 1.4E-8 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_2128 3d4614517dc22efbc26eb5b8439f15cb 469 Pfam PF00072 Response regulator receiver domain 7 115 5.1E-30 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_2128 3d4614517dc22efbc26eb5b8439f15cb 469 SUPERFAMILY SSF52540 150 389 5.04E-74 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2128 3d4614517dc22efbc26eb5b8439f15cb 469 Gene3D G3DSA:1.10.8.60 316 383 3.9E-27 T 18-10-2018 CH53_2128 3d4614517dc22efbc26eb5b8439f15cb 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 18-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH53_2128 3d4614517dc22efbc26eb5b8439f15cb 469 SUPERFAMILY SSF46689 358 458 2.11E-15 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_2128 3d4614517dc22efbc26eb5b8439f15cb 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 18-10-2018 IPR025944 Sigma-54 interaction domain, conserved site CH53_4023 3922c272f9e296035e67b0b60246ddf2 250 Gene3D G3DSA:1.10.10.10 165 246 1.3E-25 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4023 3922c272f9e296035e67b0b60246ddf2 250 SUPERFAMILY SSF51206 23 162 2.88E-31 T 18-10-2018 IPR018490 Cyclic nucleotide-binding-like CH53_4023 3922c272f9e296035e67b0b60246ddf2 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.1E-11 T 18-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CH53_4023 3922c272f9e296035e67b0b60246ddf2 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.1E-11 T 18-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CH53_4023 3922c272f9e296035e67b0b60246ddf2 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 4.6E-16 T 18-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CH53_4023 3922c272f9e296035e67b0b60246ddf2 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 18-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CH53_4023 3922c272f9e296035e67b0b60246ddf2 250 SMART SM00419 187 235 4.6E-13 T 18-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CH53_4023 3922c272f9e296035e67b0b60246ddf2 250 SMART SM00100 30 151 9.7E-22 T 18-10-2018 IPR000595 Cyclic nucleotide-binding domain CH53_4023 3922c272f9e296035e67b0b60246ddf2 250 SUPERFAMILY SSF46785 165 244 8.44E-20 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_4023 3922c272f9e296035e67b0b60246ddf2 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 4.0E-15 T 18-10-2018 IPR000595 Cyclic nucleotide-binding domain CH53_4023 3922c272f9e296035e67b0b60246ddf2 250 Gene3D G3DSA:2.60.120.10 43 164 4.1E-48 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_2286 951c5c0bfd8f57a5cf184ec9e8de582f 298 SUPERFAMILY SSF53850 93 288 7.36E-22 T 18-10-2018 CH53_2286 951c5c0bfd8f57a5cf184ec9e8de582f 298 SUPERFAMILY SSF46785 8 91 2.07E-16 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2286 951c5c0bfd8f57a5cf184ec9e8de582f 298 Pfam PF03466 LysR substrate binding domain 120 280 7.1E-18 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_2286 951c5c0bfd8f57a5cf184ec9e8de582f 298 Gene3D G3DSA:1.10.10.10 6 94 6.7E-19 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2286 951c5c0bfd8f57a5cf184ec9e8de582f 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2286 951c5c0bfd8f57a5cf184ec9e8de582f 298 Gene3D G3DSA:3.40.190.290 112 288 2.4E-12 T 18-10-2018 CH53_1085 088c3d8ed43240756d66a733a33292e8 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 307 4.3E-113 T 18-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CH53_1085 088c3d8ed43240756d66a733a33292e8 309 PIRSF PIRSF000676 1 308 2.1E-83 T 18-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CH53_1085 088c3d8ed43240756d66a733a33292e8 309 Pfam PF00288 GHMP kinases N terminal domain 85 150 6.9E-14 T 18-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CH53_1085 088c3d8ed43240756d66a733a33292e8 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 18-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CH53_1085 088c3d8ed43240756d66a733a33292e8 309 Hamap MF_00384 Homoserine kinase [thrB]. 4 308 28.164 T 18-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CH53_1085 088c3d8ed43240756d66a733a33292e8 309 SUPERFAMILY SSF55060 173 288 1.58E-32 T 18-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CH53_1085 088c3d8ed43240756d66a733a33292e8 309 Gene3D G3DSA:3.30.70.890 168 277 8.1E-101 T 18-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CH53_1085 088c3d8ed43240756d66a733a33292e8 309 Gene3D G3DSA:3.30.230.10 4 167 8.1E-101 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH53_1085 088c3d8ed43240756d66a733a33292e8 309 Pfam PF08544 GHMP kinases C terminal 221 280 4.4E-8 T 18-10-2018 IPR013750 GHMP kinase, C-terminal domain CH53_1085 088c3d8ed43240756d66a733a33292e8 309 PRINTS PR00958 Homoserine kinase signature 254 269 2.4E-32 T 18-10-2018 CH53_1085 088c3d8ed43240756d66a733a33292e8 309 PRINTS PR00958 Homoserine kinase signature 97 112 2.4E-32 T 18-10-2018 CH53_1085 088c3d8ed43240756d66a733a33292e8 309 PRINTS PR00958 Homoserine kinase signature 137 150 2.4E-32 T 18-10-2018 CH53_1085 088c3d8ed43240756d66a733a33292e8 309 PRINTS PR00958 Homoserine kinase signature 175 192 2.4E-32 T 18-10-2018 CH53_1085 088c3d8ed43240756d66a733a33292e8 309 PRINTS PR00958 Homoserine kinase signature 9 24 2.4E-32 T 18-10-2018 CH53_1085 088c3d8ed43240756d66a733a33292e8 309 SUPERFAMILY SSF54211 1 161 6.15E-31 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_1081 e6dc33c478491ed5c5d39351c2fad2c7 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 18-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CH53_1081 e6dc33c478491ed5c5d39351c2fad2c7 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 2.4E-28 T 18-10-2018 IPR001453 MoaB/Mog domain CH53_1081 e6dc33c478491ed5c5d39351c2fad2c7 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 146 5.4E-40 T 18-10-2018 IPR001453 MoaB/Mog domain CH53_1081 e6dc33c478491ed5c5d39351c2fad2c7 195 Gene3D G3DSA:3.40.980.10 1 195 1.8E-64 T 18-10-2018 IPR036425 MoaB/Mog-like domain superfamily CH53_1081 e6dc33c478491ed5c5d39351c2fad2c7 195 SUPERFAMILY SSF53218 3 188 1.96E-48 T 18-10-2018 IPR036425 MoaB/Mog-like domain superfamily CH53_1081 e6dc33c478491ed5c5d39351c2fad2c7 195 SMART SM00852 7 153 4.1E-22 T 18-10-2018 IPR001453 MoaB/Mog domain CH53_2243 5b6fe18216c86c663979c81737bb032b 160 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 12 154 1.4E-36 T 18-10-2018 IPR002178 PTS EIIA type-2 domain CH53_2243 5b6fe18216c86c663979c81737bb032b 160 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 8 154 6.8E-60 T 18-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 CH53_2243 5b6fe18216c86c663979c81737bb032b 160 SUPERFAMILY SSF55804 8 154 7.06E-41 T 18-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CH53_2243 5b6fe18216c86c663979c81737bb032b 160 Gene3D G3DSA:3.40.930.10 2 158 1.4E-61 T 18-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CH53_2243 5b6fe18216c86c663979c81737bb032b 160 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 57 73 - T 18-10-2018 IPR002178 PTS EIIA type-2 domain CH53_2263 43f21ceeed55f89608208bc44f5fc628 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 18-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 CH53_2263 43f21ceeed55f89608208bc44f5fc628 142 SUPERFAMILY SSF52161 1 140 3.53E-60 T 18-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 CH53_2263 43f21ceeed55f89608208bc44f5fc628 142 Pfam PF00572 Ribosomal protein L13 15 138 3.1E-56 T 18-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CH53_2263 43f21ceeed55f89608208bc44f5fc628 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.279 T 18-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CH53_2263 43f21ceeed55f89608208bc44f5fc628 142 Gene3D G3DSA:3.90.1180.10 1 142 1.4E-64 T 18-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 CH53_2263 43f21ceeed55f89608208bc44f5fc628 142 PIRSF PIRSF002181 1 142 1.0E-50 T 18-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CH53_2263 43f21ceeed55f89608208bc44f5fc628 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 6.5E-67 T 18-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 Gene3D G3DSA:1.10.1240.10 653 741 1.2E-39 T 18-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 SUPERFAMILY SSF82282 12 404 1.28E-115 T 18-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 942 1212 1.2E-124 T 18-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 Pfam PF02574 Homocysteine S-methyltransferase 22 330 2.9E-79 T 18-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 Gene3D G3DSA:3.20.20.20 345 647 6.1E-129 T 18-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 SMART SM01018 661 744 1.9E-42 T 18-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 Pfam PF00809 Pterin binding enzyme 365 603 8.0E-62 T 18-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 Gene3D G3DSA:3.10.196.10 913 1227 8.0E-150 T 18-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 Pfam PF02607 B12 binding domain 665 737 6.5E-24 T 18-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 SUPERFAMILY SSF52242 748 898 1.44E-46 T 18-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 Gene3D G3DSA:3.40.50.280 748 899 1.2E-56 T 18-10-2018 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 Gene3D G3DSA:1.10.288.10 940 1096 8.0E-150 T 18-10-2018 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 PIRSF PIRSF000381 6 1199 0.0 T 18-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 Gene3D G3DSA:3.20.20.330 6 344 1.1E-123 T 18-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 SUPERFAMILY SSF47644 657 743 1.7E-27 T 18-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 Pfam PF02310 B12 binding domain 752 844 1.4E-18 T 18-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 SUPERFAMILY SSF56507 907 1230 1.83E-133 T 18-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 SUPERFAMILY SSF51717 361 635 3.92E-88 T 18-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_2131 2e479dd63bd229afd794ea484419a3e0 1231 TIGRFAM TIGR02082 metH: methionine synthase 18 1196 0.0 T 18-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_509 3541f780e2e852740dde113aa906117d 409 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 19 377 1.3E-96 T 18-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CH53_509 3541f780e2e852740dde113aa906117d 409 Pfam PF01566 Natural resistance-associated macrophage protein 38 384 2.0E-122 T 18-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CH53_509 3541f780e2e852740dde113aa906117d 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 8.4E-30 T 18-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CH53_509 3541f780e2e852740dde113aa906117d 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 8.4E-30 T 18-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CH53_509 3541f780e2e852740dde113aa906117d 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 8.4E-30 T 18-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CH53_509 3541f780e2e852740dde113aa906117d 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 8.4E-30 T 18-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CH53_509 3541f780e2e852740dde113aa906117d 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 8.4E-30 T 18-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CH53_509 3541f780e2e852740dde113aa906117d 409 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 409 36.944 T 18-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CH53_2621 3c420d10c57e1e82f202bc314ccfcfe1 128 Pfam PF01597 Glycine cleavage H-protein 8 127 7.6E-46 T 18-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate CH53_2621 3c420d10c57e1e82f202bc314ccfcfe1 128 SUPERFAMILY SSF51230 4 127 7.48E-44 T 18-10-2018 IPR011053 Single hybrid motif CH53_2621 3c420d10c57e1e82f202bc314ccfcfe1 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 18-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CH53_2621 3c420d10c57e1e82f202bc314ccfcfe1 128 Gene3D G3DSA:2.40.50.100 2 128 6.2E-50 T 18-10-2018 CH53_2621 3c420d10c57e1e82f202bc314ccfcfe1 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 40.014 T 18-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CH53_2621 3c420d10c57e1e82f202bc314ccfcfe1 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 2.2E-54 T 18-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CH53_668 457a579368923fa1ec75482b6d995f27 1296 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1040 1293 1.3E-105 T 18-10-2018 CH53_668 457a579368923fa1ec75482b6d995f27 1296 Gene3D G3DSA:3.30.1330.10 213 418 1.2E-42 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CH53_668 457a579368923fa1ec75482b6d995f27 1296 SUPERFAMILY SSF56042 823 1034 4.49E-53 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CH53_668 457a579368923fa1ec75482b6d995f27 1296 SUPERFAMILY SSF56042 430 614 4.78E-53 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CH53_668 457a579368923fa1ec75482b6d995f27 1296 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1294 0.0 T 18-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CH53_668 457a579368923fa1ec75482b6d995f27 1296 SUPERFAMILY SSF55326 220 427 5.23E-65 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CH53_668 457a579368923fa1ec75482b6d995f27 1296 Gene3D G3DSA:3.90.650.10 806 981 7.0E-26 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CH53_668 457a579368923fa1ec75482b6d995f27 1296 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1296 21.411 T 18-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CH53_668 457a579368923fa1ec75482b6d995f27 1296 SUPERFAMILY SSF55326 618 815 2.88E-65 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CH53_668 457a579368923fa1ec75482b6d995f27 1296 SMART SM01211 1040 1295 8.0E-159 T 18-10-2018 CH53_668 457a579368923fa1ec75482b6d995f27 1296 Gene3D G3DSA:3.40.50.880 982 1296 1.5E-140 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_668 457a579368923fa1ec75482b6d995f27 1296 SUPERFAMILY SSF82697 1 151 1.05E-49 T 18-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CH53_668 457a579368923fa1ec75482b6d995f27 1296 SUPERFAMILY SSF52317 1036 1294 1.63E-98 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_668 457a579368923fa1ec75482b6d995f27 1296 Gene3D G3DSA:3.90.650.10 419 605 1.7E-58 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CH53_668 457a579368923fa1ec75482b6d995f27 1296 Gene3D G3DSA:3.30.1330.10 614 805 9.7E-24 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CH53_668 457a579368923fa1ec75482b6d995f27 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 965 2.4E-13 T 18-10-2018 IPR010918 PurM-like, C-terminal domain CH53_668 457a579368923fa1ec75482b6d995f27 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 431 587 2.1E-27 T 18-10-2018 IPR010918 PurM-like, C-terminal domain CH53_668 457a579368923fa1ec75482b6d995f27 1296 Gene3D G3DSA:1.10.8.750 152 212 7.2E-28 T 18-10-2018 CH53_668 457a579368923fa1ec75482b6d995f27 1296 SUPERFAMILY SSF109736 154 219 5.49E-21 T 18-10-2018 CH53_1464 f6d97c4f5674721605c1c4c9ef0497c7 206 Gene3D G3DSA:1.10.1050.10 1 102 7.6E-46 T 18-10-2018 CH53_1464 f6d97c4f5674721605c1c4c9ef0497c7 206 Pfam PF01479 S4 domain 97 143 7.2E-18 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1464 f6d97c4f5674721605c1c4c9ef0497c7 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 8.6E-86 T 18-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CH53_1464 f6d97c4f5674721605c1c4c9ef0497c7 206 Gene3D G3DSA:3.10.290.10 103 191 3.5E-36 T 18-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CH53_1464 f6d97c4f5674721605c1c4c9ef0497c7 206 SUPERFAMILY SSF55174 3 206 6.54E-72 T 18-10-2018 CH53_1464 f6d97c4f5674721605c1c4c9ef0497c7 206 SMART SM00363 96 160 8.2E-20 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1464 f6d97c4f5674721605c1c4c9ef0497c7 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 18-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1464 f6d97c4f5674721605c1c4c9ef0497c7 206 SMART SM01390 3 95 6.1E-50 T 18-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CH53_1464 f6d97c4f5674721605c1c4c9ef0497c7 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 6.8E-33 T 18-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CH53_1464 f6d97c4f5674721605c1c4c9ef0497c7 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.196 T 18-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CH53_1083 cb1e09905acc82662ad21ba835e433a4 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.188 T 18-10-2018 IPR005583 Peroxide stress protein YaaA CH53_1083 cb1e09905acc82662ad21ba835e433a4 258 Pfam PF03883 Peroxide stress protein YaaA 1 242 1.1E-91 T 18-10-2018 IPR005583 Peroxide stress protein YaaA CH53_2264 59bae44fd6fb260a4d5ce88164b468cc 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.054 T 18-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid CH53_2264 59bae44fd6fb260a4d5ce88164b468cc 130 Gene3D G3DSA:3.30.230.10 1 130 6.7E-54 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH53_2264 59bae44fd6fb260a4d5ce88164b468cc 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 18-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CH53_2264 59bae44fd6fb260a4d5ce88164b468cc 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 7.4E-46 T 18-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CH53_2264 59bae44fd6fb260a4d5ce88164b468cc 130 SUPERFAMILY SSF54211 5 130 3.3E-49 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 SMART SM00863 170 219 2.6E-19 T 18-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 Pfam PF03129 Anticodon binding domain 541 631 4.4E-21 T 18-10-2018 IPR004154 Anticodon-binding CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 SUPERFAMILY SSF81271 3 61 2.83E-16 T 18-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 SUPERFAMILY SSF55186 63 241 3.53E-64 T 18-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 5.9E-243 T 18-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 Pfam PF02824 TGS domain 4 61 3.4E-11 T 18-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 3.8E-14 T 18-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 529 2.9E-50 T 18-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 9.0E-55 T 18-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 9.0E-55 T 18-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 9.0E-55 T 18-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 9.0E-55 T 18-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 9.0E-55 T 18-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 33.989 T 18-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 Gene3D G3DSA:3.30.54.20 130 187 4.0E-62 T 18-10-2018 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 SUPERFAMILY SSF52954 529 636 1.46E-31 T 18-10-2018 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 SUPERFAMILY SSF55681 243 525 9.95E-97 T 18-10-2018 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 Gene3D G3DSA:3.30.980.10 69 222 4.0E-62 T 18-10-2018 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 Gene3D G3DSA:3.30.930.10 223 531 8.6E-129 T 18-10-2018 CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 Gene3D G3DSA:3.10.20.30 1 64 1.1E-21 T 18-10-2018 IPR012675 Beta-grasp domain superfamily CH53_4147 8730f013c082d69e44cc8331a15e01c5 642 Gene3D G3DSA:3.40.50.800 532 642 5.6E-31 T 18-10-2018 IPR036621 Anticodon-binding domain superfamily CH53_1889 77849df5862dbe5831e7662a52a63b8f 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 18-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_1889 77849df5862dbe5831e7662a52a63b8f 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 60.998 T 18-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_1889 77849df5862dbe5831e7662a52a63b8f 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 3.7E-95 T 18-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_1889 77849df5862dbe5831e7662a52a63b8f 255 Pfam PF00121 Triosephosphate isomerase 5 246 1.8E-92 T 18-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_1889 77849df5862dbe5831e7662a52a63b8f 255 Gene3D G3DSA:3.20.20.70 1 255 1.9E-102 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_1889 77849df5862dbe5831e7662a52a63b8f 255 SUPERFAMILY SSF51351 1 250 2.09E-90 T 18-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2729 4d2d8e36a397034e065773dcd6986b72 165 PIRSF PIRSF002094 1 165 3.0E-63 T 18-10-2018 IPR005632 Chaperone protein Skp GO:0051082 CH53_2729 4d2d8e36a397034e065773dcd6986b72 165 SUPERFAMILY SSF111384 22 164 5.49E-39 T 18-10-2018 CH53_2729 4d2d8e36a397034e065773dcd6986b72 165 Pfam PF03938 Outer membrane protein (OmpH-like) 10 163 4.8E-37 T 18-10-2018 IPR005632 Chaperone protein Skp GO:0051082 CH53_2729 4d2d8e36a397034e065773dcd6986b72 165 Gene3D G3DSA:3.30.910.20 21 165 6.5E-49 T 18-10-2018 IPR024930 Skp domain superfamily CH53_2729 4d2d8e36a397034e065773dcd6986b72 165 SMART SM00935 12 165 1.1E-55 T 18-10-2018 IPR005632 Chaperone protein Skp GO:0051082 CH53_3243 e902d21c3859ad46a9811804b6e3e26e 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 243 2.1E-68 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3243 e902d21c3859ad46a9811804b6e3e26e 247 SMART SM00062 26 245 2.2E-70 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3243 e902d21c3859ad46a9811804b6e3e26e 247 SMART SM00079 26 244 6.1E-8 T 18-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CH53_3243 e902d21c3859ad46a9811804b6e3e26e 247 Gene3D G3DSA:3.40.190.10 35 242 3.4E-84 T 18-10-2018 CH53_3243 e902d21c3859ad46a9811804b6e3e26e 247 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 18-10-2018 IPR018313 Solute-binding protein family 3, conserved site CH53_3243 e902d21c3859ad46a9811804b6e3e26e 247 SUPERFAMILY SSF53850 8 244 9.97E-75 T 18-10-2018 CH53_3243 e902d21c3859ad46a9811804b6e3e26e 247 Gene3D G3DSA:3.40.190.10 110 205 3.4E-84 T 18-10-2018 CH53_2897 35ba1340148619be08d0c4814fabb5fd 187 SUPERFAMILY SSF53271 16 184 4.12E-52 T 18-10-2018 IPR029057 Phosphoribosyltransferase-like CH53_2897 35ba1340148619be08d0c4814fabb5fd 187 Gene3D G3DSA:3.40.50.2020 2 187 1.3E-68 T 18-10-2018 CH53_2897 35ba1340148619be08d0c4814fabb5fd 187 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 15 184 38.61 T 18-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CH53_2897 35ba1340148619be08d0c4814fabb5fd 187 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 15 183 3.2E-71 T 18-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CH53_2897 35ba1340148619be08d0c4814fabb5fd 187 Pfam PF00156 Phosphoribosyl transferase domain 35 164 1.9E-14 T 18-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CH53_732 0d6a53189dfbb657eb4cda9f3952b699 221 Gene3D G3DSA:3.40.50.300 1 214 2.4E-42 T 18-10-2018 CH53_732 0d6a53189dfbb657eb4cda9f3952b699 221 SUPERFAMILY SSF52540 2 194 1.15E-38 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_732 0d6a53189dfbb657eb4cda9f3952b699 221 Pfam PF00005 ABC transporter 18 150 3.6E-16 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_732 0d6a53189dfbb657eb4cda9f3952b699 221 SMART SM00382 26 199 2.4E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_732 0d6a53189dfbb657eb4cda9f3952b699 221 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_879 f6368cbf3f33124065075becca09df75 275 Gene3D G3DSA:3.40.50.300 1 274 5.1E-72 T 18-10-2018 CH53_879 f6368cbf3f33124065075becca09df75 275 SMART SM00382 29 228 3.4E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_879 f6368cbf3f33124065075becca09df75 275 SUPERFAMILY SSF52540 1 237 6.17E-55 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_879 f6368cbf3f33124065075becca09df75 275 Pfam PF00005 ABC transporter 24 179 7.9E-21 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_4037 e223899be3b22343bd5e0b05135c4ddc 1295 Pfam PF00270 DEAD/DEAH box helicase 82 229 2.6E-6 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CH53_4037 e223899be3b22343bd5e0b05135c4ddc 1295 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 617 693 6.2E-18 T 18-10-2018 IPR011709 Domain of unknown function DUF1605 CH53_4037 e223899be3b22343bd5e0b05135c4ddc 1295 SMART SM00382 88 380 4.3E-6 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_4037 e223899be3b22343bd5e0b05135c4ddc 1295 Gene3D G3DSA:3.40.50.300 26 248 8.6E-75 T 18-10-2018 CH53_4037 e223899be3b22343bd5e0b05135c4ddc 1295 Gene3D G3DSA:3.40.50.300 249 417 1.3E-55 T 18-10-2018 CH53_4037 e223899be3b22343bd5e0b05135c4ddc 1295 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 10 1292 0.0 T 18-10-2018 IPR010222 RNA helicase HrpA GO:0004004 CH53_4037 e223899be3b22343bd5e0b05135c4ddc 1295 Pfam PF11898 Domain of unknown function (DUF3418) 708 1291 2.0E-238 T 18-10-2018 IPR024590 RNA helicase HrpA, C-terminal CH53_4037 e223899be3b22343bd5e0b05135c4ddc 1295 SMART SM00490 301 400 2.0E-15 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_4037 e223899be3b22343bd5e0b05135c4ddc 1295 SMART SM00487 71 255 1.4E-26 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH53_4037 e223899be3b22343bd5e0b05135c4ddc 1295 SUPERFAMILY SSF52540 70 596 4.18E-108 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4037 e223899be3b22343bd5e0b05135c4ddc 1295 Pfam PF04408 Helicase associated domain (HA2) 462 552 2.0E-16 T 18-10-2018 IPR007502 Helicase-associated domain GO:0004386 CH53_4037 e223899be3b22343bd5e0b05135c4ddc 1295 SMART SM00847 460 554 2.8E-35 T 18-10-2018 IPR007502 Helicase-associated domain GO:0004386 CH53_4037 e223899be3b22343bd5e0b05135c4ddc 1295 Gene3D G3DSA:1.20.120.1080 445 547 1.1E-17 T 18-10-2018 CH53_4037 e223899be3b22343bd5e0b05135c4ddc 1295 Pfam PF00271 Helicase conserved C-terminal domain 282 399 1.4E-11 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_612 5fc50598ee44fa12063f2d66fa7ab3aa 256 SUPERFAMILY SSF46785 4 62 1.38E-11 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_612 5fc50598ee44fa12063f2d66fa7ab3aa 256 Pfam PF00455 DeoR C terminal sensor domain 74 232 4.1E-51 T 18-10-2018 IPR014036 DeoR C-terminal sensor domain CH53_612 5fc50598ee44fa12063f2d66fa7ab3aa 256 Gene3D G3DSA:1.10.10.10 1 58 6.6E-7 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_612 5fc50598ee44fa12063f2d66fa7ab3aa 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 2.2E-18 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_612 5fc50598ee44fa12063f2d66fa7ab3aa 256 SMART SM00420 6 58 9.2E-19 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_612 5fc50598ee44fa12063f2d66fa7ab3aa 256 SMART SM01134 72 233 1.8E-72 T 18-10-2018 CH53_612 5fc50598ee44fa12063f2d66fa7ab3aa 256 SUPERFAMILY SSF100950 73 233 6.28E-36 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_612 5fc50598ee44fa12063f2d66fa7ab3aa 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 18-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CH53_2850 af557eabaacd089c2431326c3e32eb27 454 Pfam PF07690 Major Facilitator Superfamily 20 350 7.0E-40 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_2850 af557eabaacd089c2431326c3e32eb27 454 Gene3D G3DSA:1.20.1250.20 3 389 2.4E-101 T 18-10-2018 CH53_2850 af557eabaacd089c2431326c3e32eb27 454 SUPERFAMILY SSF103473 1 390 6.02E-62 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_2850 af557eabaacd089c2431326c3e32eb27 454 Gene3D G3DSA:3.30.70.100 390 454 4.0E-28 T 18-10-2018 CH53_1045 925f17d687f8ac60fc0467261b07626c 553 Hamap MF_01449 HTH-type transcriptional regulator SgrR [sgrR]. 1 553 68.237 T 18-10-2018 IPR023767 Transcriptional regulator SgrR CH53_1045 925f17d687f8ac60fc0467261b07626c 553 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 7.1E-44 T 18-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CH53_1045 925f17d687f8ac60fc0467261b07626c 553 Gene3D G3DSA:3.40.190.10 113 321 5.4E-33 T 18-10-2018 CH53_1045 925f17d687f8ac60fc0467261b07626c 553 SUPERFAMILY SSF53850 117 550 9.41E-66 T 18-10-2018 CH53_1045 925f17d687f8ac60fc0467261b07626c 553 SUPERFAMILY SSF46785 4 56 4.24E-6 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1045 925f17d687f8ac60fc0467261b07626c 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 309 2.9E-19 T 18-10-2018 IPR000914 Solute-binding protein family 5 domain CH53_3524 7b34f71db269afcb533377e52f09e534 344 SUPERFAMILY SSF47413 5 63 1.82E-18 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_3524 7b34f71db269afcb533377e52f09e534 344 SUPERFAMILY SSF53822 65 335 7.24E-61 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_3524 7b34f71db269afcb533377e52f09e534 344 Pfam PF13377 Periplasmic binding protein-like domain 174 333 4.9E-38 T 18-10-2018 CH53_3524 7b34f71db269afcb533377e52f09e534 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 18-10-2018 CH53_3524 7b34f71db269afcb533377e52f09e534 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 1.1E-5 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_3524 7b34f71db269afcb533377e52f09e534 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 1.1E-5 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_3524 7b34f71db269afcb533377e52f09e534 344 Gene3D G3DSA:3.40.50.2300 80 324 1.5E-75 T 18-10-2018 CH53_3524 7b34f71db269afcb533377e52f09e534 344 Gene3D G3DSA:1.10.260.40 4 62 5.0E-27 T 18-10-2018 CH53_3524 7b34f71db269afcb533377e52f09e534 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 2.0E-21 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_3524 7b34f71db269afcb533377e52f09e534 344 Gene3D G3DSA:3.40.50.2300 164 327 1.5E-75 T 18-10-2018 CH53_3524 7b34f71db269afcb533377e52f09e534 344 SMART SM00354 5 75 3.4E-33 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_3610 8f381eaa0be1ab933aef6e87e9c2f552 328 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 319 3.1E-34 T 18-10-2018 IPR000160 GGDEF domain CH53_3610 8f381eaa0be1ab933aef6e87e9c2f552 328 SMART SM00065 26 168 3.4E-16 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_3610 8f381eaa0be1ab933aef6e87e9c2f552 328 SMART SM00267 151 327 3.1E-27 T 18-10-2018 IPR000160 GGDEF domain CH53_3610 8f381eaa0be1ab933aef6e87e9c2f552 328 SUPERFAMILY SSF55073 169 316 5.96E-35 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_3610 8f381eaa0be1ab933aef6e87e9c2f552 328 Gene3D G3DSA:3.30.450.40 13 164 1.8E-16 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_3610 8f381eaa0be1ab933aef6e87e9c2f552 328 SUPERFAMILY SSF55781 26 163 1.05E-26 T 18-10-2018 CH53_3610 8f381eaa0be1ab933aef6e87e9c2f552 328 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 318 4.1E-34 T 18-10-2018 IPR000160 GGDEF domain CH53_3610 8f381eaa0be1ab933aef6e87e9c2f552 328 Gene3D G3DSA:3.30.70.270 165 322 7.6E-39 T 18-10-2018 CH53_3610 8f381eaa0be1ab933aef6e87e9c2f552 328 Pfam PF01590 GAF domain 27 158 1.3E-11 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_3339 b137cf368d3a39b2c1ffe2cb64837459 462 Pfam PF13520 Amino acid permease 53 420 2.7E-33 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_3339 b137cf368d3a39b2c1ffe2cb64837459 462 Gene3D G3DSA:1.20.1740.10 21 456 1.4E-64 T 18-10-2018 CH53_3339 b137cf368d3a39b2c1ffe2cb64837459 462 PIRSF PIRSF006060 5 455 3.3E-70 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_989 92703de978f04756d7b6c3402ee46285 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 7.0E-58 T 18-10-2018 IPR008249 Uncharacterised protein family UPF0231 CH53_989 92703de978f04756d7b6c3402ee46285 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 30.253 T 18-10-2018 IPR008249 Uncharacterised protein family UPF0231 CH53_989 92703de978f04756d7b6c3402ee46285 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 3.6E-45 T 18-10-2018 IPR008249 Uncharacterised protein family UPF0231 CH53_989 92703de978f04756d7b6c3402ee46285 120 PIRSF PIRSF006287 1 120 1.2E-50 T 18-10-2018 IPR008249 Uncharacterised protein family UPF0231 CH53_1932 9468a7c5448311b3532938fdb0a12051 367 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 365 8.7E-189 T 18-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CH53_1932 9468a7c5448311b3532938fdb0a12051 367 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 18-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site CH53_1932 9468a7c5448311b3532938fdb0a12051 367 Gene3D G3DSA:3.40.1350.30 45 189 1.1E-144 T 18-10-2018 CH53_1932 9468a7c5448311b3532938fdb0a12051 367 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.779 T 18-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CH53_1932 9468a7c5448311b3532938fdb0a12051 367 Gene3D G3DSA:3.40.50.150 13 362 1.1E-144 T 18-10-2018 CH53_1932 9468a7c5448311b3532938fdb0a12051 367 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 365 1.1E-193 T 18-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CH53_1932 9468a7c5448311b3532938fdb0a12051 367 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 18-10-2018 IPR030390 RNA methyltransferase TrmA, active site CH53_1932 9468a7c5448311b3532938fdb0a12051 367 SUPERFAMILY SSF53335 8 365 1.29E-52 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_438 68502ef57948a8653b2e3fd54bb1ba3e 744 SUPERFAMILY SSF52096 24 317 2.57E-64 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CH53_438 68502ef57948a8653b2e3fd54bb1ba3e 744 Gene3D G3DSA:1.10.1040.50 514 725 7.7E-69 T 18-10-2018 CH53_438 68502ef57948a8653b2e3fd54bb1ba3e 744 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 26 730 0.0 T 18-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CH53_438 68502ef57948a8653b2e3fd54bb1ba3e 744 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 642 726 5.3E-6 T 18-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CH53_438 68502ef57948a8653b2e3fd54bb1ba3e 744 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 511 604 1.0E-24 T 18-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CH53_438 68502ef57948a8653b2e3fd54bb1ba3e 744 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 20 730 54.044 T 18-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CH53_438 68502ef57948a8653b2e3fd54bb1ba3e 744 Gene3D G3DSA:3.90.226.10 22 323 8.1E-94 T 18-10-2018 CH53_438 68502ef57948a8653b2e3fd54bb1ba3e 744 SUPERFAMILY SSF51735 327 508 7.56E-49 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_438 68502ef57948a8653b2e3fd54bb1ba3e 744 SUPERFAMILY SSF48179 641 730 2.72E-25 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_438 68502ef57948a8653b2e3fd54bb1ba3e 744 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 330 508 3.8E-56 T 18-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CH53_438 68502ef57948a8653b2e3fd54bb1ba3e 744 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 222 2.2E-40 T 18-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CH53_438 68502ef57948a8653b2e3fd54bb1ba3e 744 Gene3D G3DSA:3.40.50.720 328 513 2.1E-59 T 18-10-2018 CH53_438 68502ef57948a8653b2e3fd54bb1ba3e 744 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 508 533 - T 18-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CH53_438 68502ef57948a8653b2e3fd54bb1ba3e 744 SUPERFAMILY SSF48179 511 618 2.04E-29 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_3995 d702166faa58d3089e4648adfebf75b2 257 SUPERFAMILY SSF53850 1 254 1.09E-67 T 18-10-2018 CH53_3995 d702166faa58d3089e4648adfebf75b2 257 Gene3D G3DSA:3.40.190.10 111 210 3.3E-79 T 18-10-2018 CH53_3995 d702166faa58d3089e4648adfebf75b2 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 251 5.6E-63 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3995 d702166faa58d3089e4648adfebf75b2 257 SMART SM00062 25 253 1.2E-70 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3995 d702166faa58d3089e4648adfebf75b2 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 18-10-2018 IPR018313 Solute-binding protein family 3, conserved site CH53_3995 d702166faa58d3089e4648adfebf75b2 257 Gene3D G3DSA:3.40.190.10 28 249 3.3E-79 T 18-10-2018 CH53_49 1636d14d4d6de0001630f0c2930cb6dd 390 SUPERFAMILY SSF49373 191 270 3.69E-14 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_49 1636d14d4d6de0001630f0c2930cb6dd 390 Gene3D G3DSA:3.10.100.10 281 390 4.0E-7 T 18-10-2018 IPR016186 C-type lectin-like/link domain superfamily CH53_49 1636d14d4d6de0001630f0c2930cb6dd 390 Gene3D G3DSA:2.60.40.1080 186 279 2.7E-22 T 18-10-2018 CH53_4402 af2c5196adce39de177c88802dfced02 373 Gene3D G3DSA:3.40.50.620 1 212 3.4E-97 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_4402 af2c5196adce39de177c88802dfced02 373 Pfam PF03054 tRNA methyl transferase 7 361 5.4E-143 T 18-10-2018 CH53_4402 af2c5196adce39de177c88802dfced02 373 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 362 40.731 T 18-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CH53_4402 af2c5196adce39de177c88802dfced02 373 Gene3D G3DSA:2.30.30.280 214 282 3.3E-28 T 18-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CH53_4402 af2c5196adce39de177c88802dfced02 373 Gene3D G3DSA:2.40.30.10 283 369 1.2E-33 T 18-10-2018 CH53_4402 af2c5196adce39de177c88802dfced02 373 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 361 1.4E-156 T 18-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CH53_4402 af2c5196adce39de177c88802dfced02 373 SUPERFAMILY SSF52402 5 296 1.48E-56 T 18-10-2018 CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 Gene3D G3DSA:3.90.1150.50 1001 1148 1.1E-47 T 18-10-2018 IPR037235 TRCF-like, C-terminal domain CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 Gene3D G3DSA:3.40.50.300 539 778 3.7E-236 T 18-10-2018 CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 Gene3D G3DSA:3.40.50.11180 24 334 2.2E-126 T 18-10-2018 CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 18-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 SMART SM00982 1005 1105 4.3E-49 T 18-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 SUPERFAMILY SSF143517 992 1144 7.45E-45 T 18-10-2018 IPR037235 TRCF-like, C-terminal domain CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 SMART SM01058 476 573 6.2E-51 T 18-10-2018 IPR003711 CarD-like/TRCF domain CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 SUPERFAMILY SSF52540 351 463 6.37E-28 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 Pfam PF00271 Helicase conserved C-terminal domain 803 906 8.9E-18 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 Gene3D G3DSA:3.40.50.11140 354 450 1.4E-35 T 18-10-2018 CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 SMART SM00487 597 787 6.0E-33 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 Pfam PF03461 TRCF domain 1006 1097 4.9E-28 T 18-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 5.9E-19 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 SUPERFAMILY SSF52540 9 341 3.52E-101 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 Gene3D G3DSA:2.30.30.840 480 538 3.7E-236 T 18-10-2018 CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 3.6E-25 T 18-10-2018 IPR003711 CarD-like/TRCF domain CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 32 1140 27.879 T 18-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 SUPERFAMILY SSF52540 779 987 3.92E-49 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 Gene3D G3DSA:3.40.50.300 475 987 3.7E-236 T 18-10-2018 CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 Gene3D G3DSA:3.30.2060.10 128 213 2.2E-126 T 18-10-2018 CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 SMART SM00490 823 907 6.1E-19 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 SUPERFAMILY SSF141259 468 545 3.27E-24 T 18-10-2018 IPR036101 CarD-like/TRCF domain superfamily CH53_4415 bc46ffe7ca10cc46297e873a9cf79ecd 1148 SUPERFAMILY SSF52540 520 780 6.91E-64 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3128 a95248e8a884d63c4fceafc3757a11ae 485 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 351 370 - T 18-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CH53_3128 a95248e8a884d63c4fceafc3757a11ae 485 PRINTS PR00147 DNA photolyase signature 150 166 2.6E-30 T 18-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CH53_3128 a95248e8a884d63c4fceafc3757a11ae 485 PRINTS PR00147 DNA photolyase signature 390 404 2.6E-30 T 18-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CH53_3128 a95248e8a884d63c4fceafc3757a11ae 485 PRINTS PR00147 DNA photolyase signature 351 369 2.6E-30 T 18-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CH53_3128 a95248e8a884d63c4fceafc3757a11ae 485 PRINTS PR00147 DNA photolyase signature 331 347 2.6E-30 T 18-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CH53_3128 a95248e8a884d63c4fceafc3757a11ae 485 Gene3D G3DSA:1.25.40.80 139 295 1.7E-75 T 18-10-2018 CH53_3128 a95248e8a884d63c4fceafc3757a11ae 485 Pfam PF00875 DNA photolyase 5 180 1.8E-41 T 18-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 CH53_3128 a95248e8a884d63c4fceafc3757a11ae 485 SUPERFAMILY SSF52425 3 204 1.03E-53 T 18-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 CH53_3128 a95248e8a884d63c4fceafc3757a11ae 485 Gene3D G3DSA:1.10.579.10 299 481 2.5E-82 T 18-10-2018 CH53_3128 a95248e8a884d63c4fceafc3757a11ae 485 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 331 343 - T 18-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CH53_3128 a95248e8a884d63c4fceafc3757a11ae 485 Pfam PF03441 FAD binding domain of DNA photolyase 281 475 3.3E-81 T 18-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 CH53_3128 a95248e8a884d63c4fceafc3757a11ae 485 Gene3D G3DSA:3.40.50.620 5 210 1.7E-75 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_3128 a95248e8a884d63c4fceafc3757a11ae 485 SUPERFAMILY SSF48173 201 478 6.67E-107 T 18-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 CH53_429 b7f1beffa5d5e48d733066266f4d9667 690 Pfam PF01266 FAD dependent oxidoreductase 266 649 1.7E-51 T 18-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CH53_429 b7f1beffa5d5e48d733066266f4d9667 690 Gene3D G3DSA:3.40.50.150 9 251 3.6E-107 T 18-10-2018 CH53_429 b7f1beffa5d5e48d733066266f4d9667 690 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 679 5.2E-153 T 18-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 CH53_429 b7f1beffa5d5e48d733066266f4d9667 690 Gene3D G3DSA:3.30.9.10 351 584 1.4E-147 T 18-10-2018 CH53_429 b7f1beffa5d5e48d733066266f4d9667 690 SUPERFAMILY SSF51905 266 679 1.94E-29 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_429 b7f1beffa5d5e48d733066266f4d9667 690 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 119 243 1.4E-47 T 18-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 CH53_429 b7f1beffa5d5e48d733066266f4d9667 690 Gene3D G3DSA:3.50.50.60 267 676 1.4E-147 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_429 b7f1beffa5d5e48d733066266f4d9667 690 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 674 28.019 T 18-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 CH53_483 bdcad9006c70b0ac36a36eee731cbd61 338 Gene3D G3DSA:3.40.190.10 34 308 3.7E-111 T 18-10-2018 CH53_483 bdcad9006c70b0ac36a36eee731cbd61 338 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 126 143 - T 18-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 CH53_483 bdcad9006c70b0ac36a36eee731cbd61 338 Gene3D G3DSA:3.40.190.10 128 313 3.7E-111 T 18-10-2018 CH53_483 bdcad9006c70b0ac36a36eee731cbd61 338 Pfam PF13343 Bacterial extracellular solute-binding protein 81 314 5.9E-26 T 18-10-2018 CH53_483 bdcad9006c70b0ac36a36eee731cbd61 338 SUPERFAMILY SSF53850 33 331 5.61E-75 T 18-10-2018 CH53_483 bdcad9006c70b0ac36a36eee731cbd61 338 PIRSF PIRSF002825 6 338 3.0E-81 T 18-10-2018 IPR026045 Ferric binding protein CH53_3431 96a33944a3bffec31a72174d7636fce7 423 SUPERFAMILY SSF49401 245 420 2.63E-8 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_3431 96a33944a3bffec31a72174d7636fce7 423 Pfam PF00419 Fimbrial protein 240 423 3.4E-37 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_3431 96a33944a3bffec31a72174d7636fce7 423 PIRSF PIRSF029766 1 423 2.0E-167 T 18-10-2018 IPR011228 Uncharacterised conserved protein UCP029766 CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 Gene3D G3DSA:3.30.70.240 389 482 2.5E-126 T 18-10-2018 CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 1.3E-25 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 Pfam PF00679 Elongation factor G C-terminus 397 476 3.3E-21 T 18-10-2018 IPR000640 Elongation factor EFG, domain V-like CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 1.3E-57 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 2.6E-288 T 18-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.6E-15 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.6E-15 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.6E-15 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.6E-15 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.6E-15 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 Gene3D G3DSA:3.30.70.870 306 590 2.5E-126 T 18-10-2018 CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 SUPERFAMILY SSF50447 151 299 7.49E-33 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 Gene3D G3DSA:2.40.30.10 199 299 2.6E-34 T 18-10-2018 CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 18-10-2018 IPR031157 Tr-type G domain, conserved site CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 6.2E-10 T 18-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 SUPERFAMILY SSF54980 398 512 5.76E-26 T 18-10-2018 IPR035647 EF-G domain III/V-like CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 SUPERFAMILY SSF54980 302 387 1.58E-15 T 18-10-2018 IPR035647 EF-G domain III/V-like CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 Gene3D G3DSA:3.40.50.300 1 198 3.8E-69 T 18-10-2018 CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 SUPERFAMILY SSF52540 3 219 9.74E-58 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1810 ab9096e77f00ce34f1d797d927747e27 607 Gene3D G3DSA:2.40.50.250 483 599 2.5E-126 T 18-10-2018 CH53_2803 b6504a83d526f28190b6169773b530c7 367 SUPERFAMILY SSF88697 276 366 4.14E-23 T 18-10-2018 IPR015947 PUA-like superfamily CH53_2803 b6504a83d526f28190b6169773b530c7 367 Pfam PF01472 PUA domain 276 350 1.0E-20 T 18-10-2018 IPR002478 PUA domain GO:0003723 CH53_2803 b6504a83d526f28190b6169773b530c7 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 1.0E-56 T 18-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CH53_2803 b6504a83d526f28190b6169773b530c7 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 1.0E-56 T 18-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CH53_2803 b6504a83d526f28190b6169773b530c7 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 1.0E-56 T 18-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CH53_2803 b6504a83d526f28190b6169773b530c7 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 1.0E-56 T 18-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CH53_2803 b6504a83d526f28190b6169773b530c7 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 1.0E-56 T 18-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CH53_2803 b6504a83d526f28190b6169773b530c7 367 Pfam PF00696 Amino acid kinase family 6 234 2.8E-44 T 18-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CH53_2803 b6504a83d526f28190b6169773b530c7 367 SUPERFAMILY SSF53633 6 256 8.38E-65 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CH53_2803 b6504a83d526f28190b6169773b530c7 367 Gene3D G3DSA:3.40.1160.10 2 258 6.0E-88 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CH53_2803 b6504a83d526f28190b6169773b530c7 367 Gene3D G3DSA:2.30.130.10 266 367 2.1E-28 T 18-10-2018 IPR036974 PUA domain superfamily GO:0003723 CH53_2803 b6504a83d526f28190b6169773b530c7 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 263 35.987 T 18-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CH53_2803 b6504a83d526f28190b6169773b530c7 367 PIRSF PIRSF000729 1 367 3.0E-141 T 18-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CH53_2803 b6504a83d526f28190b6169773b530c7 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 1.5E-151 T 18-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CH53_2803 b6504a83d526f28190b6169773b530c7 367 SMART SM00359 276 359 2.3E-21 T 18-10-2018 IPR002478 PUA domain GO:0003723 CH53_2803 b6504a83d526f28190b6169773b530c7 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 18-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CH53_253 326a3dd438ca9e7d2de79a7a6fd623d4 247 Pfam PF07729 FCD domain 90 216 3.8E-22 T 18-10-2018 IPR011711 GntR, C-terminal CH53_253 326a3dd438ca9e7d2de79a7a6fd623d4 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 3.7E-23 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_253 326a3dd438ca9e7d2de79a7a6fd623d4 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 7.7E-8 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_253 326a3dd438ca9e7d2de79a7a6fd623d4 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 7.7E-8 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_253 326a3dd438ca9e7d2de79a7a6fd623d4 247 SUPERFAMILY SSF48008 88 224 6.02E-26 T 18-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CH53_253 326a3dd438ca9e7d2de79a7a6fd623d4 247 Gene3D G3DSA:1.10.10.10 1 70 1.3E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_253 326a3dd438ca9e7d2de79a7a6fd623d4 247 Gene3D G3DSA:1.20.120.530 89 221 2.4E-22 T 18-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CH53_253 326a3dd438ca9e7d2de79a7a6fd623d4 247 SMART SM00895 90 217 7.9E-22 T 18-10-2018 IPR011711 GntR, C-terminal CH53_253 326a3dd438ca9e7d2de79a7a6fd623d4 247 SMART SM00345 7 66 4.4E-24 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_253 326a3dd438ca9e7d2de79a7a6fd623d4 247 SUPERFAMILY SSF46785 2 70 5.1E-22 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1560 84063d2e7326952c9ef58bacf0d0b9de 792 Pfam PF12836 Helix-hairpin-helix motif 490 554 3.5E-28 T 18-10-2018 CH53_1560 84063d2e7326952c9ef58bacf0d0b9de 792 Gene3D G3DSA:1.10.10.650 1 109 3.6E-39 T 18-10-2018 IPR023319 Tex-like protein, HTH domain superfamily CH53_1560 84063d2e7326952c9ef58bacf0d0b9de 792 Gene3D G3DSA:3.30.420.140 325 450 1.3E-149 T 18-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 CH53_1560 84063d2e7326952c9ef58bacf0d0b9de 792 Gene3D G3DSA:1.10.150.310 498 629 3.9E-50 T 18-10-2018 CH53_1560 84063d2e7326952c9ef58bacf0d0b9de 792 SUPERFAMILY SSF53098 322 468 3.11E-48 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_1560 84063d2e7326952c9ef58bacf0d0b9de 792 SUPERFAMILY SSF50249 637 720 1.12E-24 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_1560 84063d2e7326952c9ef58bacf0d0b9de 792 Pfam PF00575 S1 RNA binding domain 649 719 4.8E-22 T 18-10-2018 IPR003029 S1 domain GO:0003676 CH53_1560 84063d2e7326952c9ef58bacf0d0b9de 792 SUPERFAMILY SSF47781 559 631 2.0E-19 T 18-10-2018 IPR010994 RuvA domain 2-like CH53_1560 84063d2e7326952c9ef58bacf0d0b9de 792 Pfam PF09371 Tex-like protein N-terminal domain 9 193 1.4E-68 T 18-10-2018 IPR018974 Tex-like protein, N-terminal CH53_1560 84063d2e7326952c9ef58bacf0d0b9de 792 Gene3D G3DSA:1.10.3500.10 112 497 1.3E-149 T 18-10-2018 IPR023323 Tex-like domain superfamily CH53_1560 84063d2e7326952c9ef58bacf0d0b9de 792 SUPERFAMILY SSF158832 2 321 1.83E-117 T 18-10-2018 CH53_1560 84063d2e7326952c9ef58bacf0d0b9de 792 SMART SM00316 648 719 1.3E-25 T 18-10-2018 IPR022967 RNA-binding domain, S1 CH53_1560 84063d2e7326952c9ef58bacf0d0b9de 792 Pfam PF16921 Tex protein YqgF-like domain 327 450 2.5E-48 T 18-10-2018 IPR032639 Tex protein, YqgF-like domain CH53_1560 84063d2e7326952c9ef58bacf0d0b9de 792 SUPERFAMILY SSF47781 469 557 1.89E-28 T 18-10-2018 IPR010994 RuvA domain 2-like CH53_1560 84063d2e7326952c9ef58bacf0d0b9de 792 Gene3D G3DSA:2.40.50.140 630 723 1.1E-28 T 18-10-2018 CH53_1560 84063d2e7326952c9ef58bacf0d0b9de 792 SMART SM00732 326 423 1.8E-34 T 18-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CH53_973 6b6d66669fdf12338f28031d50e28d3f 441 Gene3D G3DSA:1.10.3090.10 166 417 6.7E-101 T 18-10-2018 CH53_973 6b6d66669fdf12338f28031d50e28d3f 441 Pfam PF12626 Polymerase A arginine-rich C-terminus 313 432 4.9E-42 T 18-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain CH53_973 6b6d66669fdf12338f28031d50e28d3f 441 SUPERFAMILY SSF81891 166 377 4.71E-50 T 18-10-2018 CH53_973 6b6d66669fdf12338f28031d50e28d3f 441 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 195 255 6.4E-20 T 18-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CH53_973 6b6d66669fdf12338f28031d50e28d3f 441 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 2 431 37.986 T 18-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CH53_973 6b6d66669fdf12338f28031d50e28d3f 441 Pfam PF01743 Poly A polymerase head domain 34 168 5.5E-40 T 18-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CH53_973 6b6d66669fdf12338f28031d50e28d3f 441 SUPERFAMILY SSF81301 5 164 1.53E-40 T 18-10-2018 CH53_973 6b6d66669fdf12338f28031d50e28d3f 441 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 3 432 7.4E-159 T 18-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CH53_973 6b6d66669fdf12338f28031d50e28d3f 441 Gene3D G3DSA:3.30.460.10 1 165 7.1E-66 T 18-10-2018 CH53_1628 471d75ed2c13b321ee8fa73763c7964a 877 Pfam PF00577 Outer membrane usher protein 224 771 3.6E-157 T 18-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 CH53_1628 471d75ed2c13b321ee8fa73763c7964a 877 SUPERFAMILY SSF141729 57 184 1.15E-30 T 18-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 CH53_1628 471d75ed2c13b321ee8fa73763c7964a 877 Pfam PF13953 PapC C-terminal domain 781 846 4.1E-23 T 18-10-2018 IPR025949 PapC-like, C-terminal domain CH53_1628 471d75ed2c13b321ee8fa73763c7964a 877 Gene3D G3DSA:2.60.40.2070 779 872 4.4E-21 T 18-10-2018 CH53_1628 471d75ed2c13b321ee8fa73763c7964a 877 Gene3D G3DSA:2.60.40.3110 291 380 1.8E-36 T 18-10-2018 CH53_1628 471d75ed2c13b321ee8fa73763c7964a 877 Pfam PF13954 PapC N-terminal domain 59 207 9.6E-42 T 18-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 CH53_1628 471d75ed2c13b321ee8fa73763c7964a 877 Gene3D G3DSA:3.10.20.410 57 184 2.7E-34 T 18-10-2018 CH53_1628 471d75ed2c13b321ee8fa73763c7964a 877 Gene3D G3DSA:2.60.40.2610 687 777 8.1E-32 T 18-10-2018 CH53_3 506334cd2781d6524a12f46a55481a44 268 Pfam PF01063 Amino-transferase class IV 24 246 8.8E-50 T 18-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 CH53_3 506334cd2781d6524a12f46a55481a44 268 Gene3D G3DSA:3.20.10.10 121 265 8.6E-49 T 18-10-2018 CH53_3 506334cd2781d6524a12f46a55481a44 268 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 18-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 CH53_3 506334cd2781d6524a12f46a55481a44 268 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 263 1.4E-111 T 18-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 CH53_3 506334cd2781d6524a12f46a55481a44 268 SUPERFAMILY SSF56752 1 256 1.27E-68 T 18-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 CH53_3 506334cd2781d6524a12f46a55481a44 268 Gene3D G3DSA:3.30.470.10 1 108 2.5E-30 T 18-10-2018 CH53_906 269f502708710c3cc8348be62b4185f4 92 Gene3D G3DSA:2.30.110.20 1 91 3.1E-32 T 18-10-2018 IPR036624 Hcp1-like superfamily CH53_906 269f502708710c3cc8348be62b4185f4 92 Pfam PF05638 Type VI secretion system effector, Hcp 11 90 2.2E-17 T 18-10-2018 IPR008514 Type VI secretion system effector, Hcp CH53_906 269f502708710c3cc8348be62b4185f4 92 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 89 1.6E-18 T 18-10-2018 IPR008514 Type VI secretion system effector, Hcp CH53_906 269f502708710c3cc8348be62b4185f4 92 SUPERFAMILY SSF141452 4 90 2.88E-19 T 18-10-2018 IPR036624 Hcp1-like superfamily CH53_2010 7cc55d7e22feae4e7ca99f24b136d9c7 206 PIRSF PIRSF006324 1 206 8.3E-41 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CH53_2010 7cc55d7e22feae4e7ca99f24b136d9c7 206 Pfam PF01810 LysE type translocator 14 205 2.2E-50 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CH53_2010 7cc55d7e22feae4e7ca99f24b136d9c7 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 3.3E-61 T 18-10-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 402 415 - T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 Pfam PF04546 Sigma-70, non-essential region 139 347 4.5E-74 T 18-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 SUPERFAMILY SSF88659 508 610 2.32E-25 T 18-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 Pfam PF04539 Sigma-70 region 3 457 532 3.5E-29 T 18-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 SUPERFAMILY SSF88946 115 445 9.94E-102 T 18-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 Gene3D G3DSA:1.10.601.10 113 447 2.4E-147 T 18-10-2018 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 Gene3D G3DSA:1.10.220.120 1 64 5.3E-31 T 18-10-2018 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 374 610 7.8E-121 T 18-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 Pfam PF04545 Sigma-70, region 4 546 599 1.0E-18 T 18-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 Gene3D G3DSA:1.10.10.10 451 527 5.5E-33 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 571 597 - T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 Pfam PF04542 Sigma-70 region 2 378 447 1.7E-21 T 18-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.7E-12 T 18-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 PRINTS PR00046 Major sigma-70 factor signature 586 597 6.3E-31 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 PRINTS PR00046 Major sigma-70 factor signature 402 415 6.3E-31 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 PRINTS PR00046 Major sigma-70 factor signature 550 562 6.3E-31 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 PRINTS PR00046 Major sigma-70 factor signature 571 586 6.3E-31 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 PRINTS PR00046 Major sigma-70 factor signature 426 434 6.3E-31 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 611 46.724 T 18-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 Gene3D G3DSA:1.10.10.10 528 612 1.8E-37 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 SUPERFAMILY SSF88659 451 524 1.54E-20 T 18-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 374 599 3.5E-38 T 18-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CH53_2324 29be96863aa98a3b3bab6a6fdd40a1c8 612 Pfam PF03979 Sigma-70 factor, region 1.1 4 79 2.0E-30 T 18-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 Gene3D G3DSA:3.30.565.10 276 425 7.9E-37 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 SUPERFAMILY SSF55874 259 422 7.07E-41 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 SUPERFAMILY SSF55785 87 195 7.5E-13 T 18-10-2018 IPR035965 PAS domain superfamily CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 SUPERFAMILY SSF47384 190 268 4.51E-20 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 5.4E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 5.4E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 5.4E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 5.4E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 Pfam PF00989 PAS fold 99 194 1.9E-9 T 18-10-2018 IPR013767 PAS fold GO:0006355 CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 SMART SM00091 98 164 5.8E-8 T 18-10-2018 IPR000014 PAS domain CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 98 211 1.2E-8 T 18-10-2018 IPR000014 PAS domain CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 423 1.5E-22 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 Gene3D G3DSA:3.30.450.20 86 199 2.6E-9 T 18-10-2018 CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 Gene3D G3DSA:1.10.287.130 200 269 3.7E-23 T 18-10-2018 CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 420 1.8E-134 T 18-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 1.8E-28 T 18-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 1.9E-18 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 SMART SM00387 313 425 1.3E-34 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_2822 ac84b9d9ec382648df06f3ce5c2adcb4 438 SMART SM00388 203 269 3.0E-22 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_2336 470af8c83b468315131f8bb692148005 476 SUPERFAMILY SSF53613 12 310 1.53E-57 T 18-10-2018 IPR029056 Ribokinase-like CH53_2336 470af8c83b468315131f8bb692148005 476 Pfam PF01467 Cytidylyltransferase-like 345 469 2.2E-15 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CH53_2336 470af8c83b468315131f8bb692148005 476 Gene3D G3DSA:3.40.50.620 319 475 8.4E-39 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_2336 470af8c83b468315131f8bb692148005 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 472 1.9E-63 T 18-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 CH53_2336 470af8c83b468315131f8bb692148005 476 SUPERFAMILY SSF52374 340 470 3.1E-22 T 18-10-2018 CH53_2336 470af8c83b468315131f8bb692148005 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 18-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CH53_2336 470af8c83b468315131f8bb692148005 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.319 T 18-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 CH53_2336 470af8c83b468315131f8bb692148005 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 1.3E-127 T 18-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 CH53_2336 470af8c83b468315131f8bb692148005 476 Gene3D G3DSA:3.40.1190.20 2 309 2.6E-110 T 18-10-2018 IPR029056 Ribokinase-like CH53_2336 470af8c83b468315131f8bb692148005 476 Pfam PF00294 pfkB family carbohydrate kinase 13 305 8.6E-54 T 18-10-2018 IPR011611 Carbohydrate kinase PfkB CH53_2336 470af8c83b468315131f8bb692148005 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 9.0E-18 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CH53_1576 2c7b2b04403fb861f23dc20c826cb011 815 PIRSF PIRSF000460 2 815 1.2E-232 T 18-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CH53_1576 2c7b2b04403fb861f23dc20c826cb011 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 18-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CH53_1576 2c7b2b04403fb861f23dc20c826cb011 815 SUPERFAMILY SSF53756 12 814 0.0 T 18-10-2018 CH53_1576 2c7b2b04403fb861f23dc20c826cb011 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 18-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CH53_1576 2c7b2b04403fb861f23dc20c826cb011 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 18-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CH53_1576 2c7b2b04403fb861f23dc20c826cb011 815 Gene3D G3DSA:3.40.50.2000 468 795 0.0 T 18-10-2018 CH53_1576 2c7b2b04403fb861f23dc20c826cb011 815 Gene3D G3DSA:3.40.50.2000 27 812 0.0 T 18-10-2018 CH53_1866 a7cf9c902eed378c3d69ae43c40da10d 354 SUPERFAMILY SSF53756 1 344 1.13E-101 T 18-10-2018 CH53_1866 a7cf9c902eed378c3d69ae43c40da10d 354 Gene3D G3DSA:3.40.50.2000 164 346 8.6E-66 T 18-10-2018 CH53_1866 a7cf9c902eed378c3d69ae43c40da10d 354 Gene3D G3DSA:3.40.50.2000 1 151 1.1E-59 T 18-10-2018 CH53_1866 a7cf9c902eed378c3d69ae43c40da10d 354 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 341 2.2E-161 T 18-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 CH53_1866 a7cf9c902eed378c3d69ae43c40da10d 354 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 1.5E-80 T 18-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 CH53_3741 7d967feee35ea3f5639a7f6bd7cc76a4 255 Gene3D G3DSA:3.40.1410.10 103 238 7.8E-35 T 18-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CH53_3741 7d967feee35ea3f5639a7f6bd7cc76a4 255 Pfam PF07702 UTRA domain 105 242 2.4E-35 T 18-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CH53_3741 7d967feee35ea3f5639a7f6bd7cc76a4 255 SUPERFAMILY SSF64288 72 248 7.07E-44 T 18-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CH53_3741 7d967feee35ea3f5639a7f6bd7cc76a4 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 2.2E-9 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_3741 7d967feee35ea3f5639a7f6bd7cc76a4 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 2.2E-9 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_3741 7d967feee35ea3f5639a7f6bd7cc76a4 255 Gene3D G3DSA:1.10.10.10 19 88 2.0E-23 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3741 7d967feee35ea3f5639a7f6bd7cc76a4 255 SUPERFAMILY SSF46785 18 88 2.44E-21 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3741 7d967feee35ea3f5639a7f6bd7cc76a4 255 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 20 249 7.8E-107 T 18-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 CH53_3741 7d967feee35ea3f5639a7f6bd7cc76a4 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 7.6E-20 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_3741 7d967feee35ea3f5639a7f6bd7cc76a4 255 SMART SM00866 105 242 1.4E-33 T 18-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CH53_3741 7d967feee35ea3f5639a7f6bd7cc76a4 255 SMART SM00345 25 84 6.3E-19 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_2498 e0ec1275d7a90a69e2b1b87e0da8dce3 230 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 31 228 3.0E-67 T 18-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 CH53_2498 e0ec1275d7a90a69e2b1b87e0da8dce3 230 SUPERFAMILY SSF51366 8 226 1.58E-60 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CH53_2498 e0ec1275d7a90a69e2b1b87e0da8dce3 230 Gene3D G3DSA:3.20.20.70 1 229 1.2E-91 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2498 e0ec1275d7a90a69e2b1b87e0da8dce3 230 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 7 229 40.554 T 18-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 CH53_1904 68393c4d96a11910a93a463d04561161 732 SUPERFAMILY SSF52540 220 601 7.71E-40 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1904 68393c4d96a11910a93a463d04561161 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 25.495 T 18-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CH53_1904 68393c4d96a11910a93a463d04561161 732 Pfam PF00271 Helicase conserved C-terminal domain 522 589 2.0E-5 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_1904 68393c4d96a11910a93a463d04561161 732 Gene3D G3DSA:3.40.50.300 184 379 1.6E-81 T 18-10-2018 CH53_1904 68393c4d96a11910a93a463d04561161 732 Gene3D G3DSA:1.10.8.630 2 113 1.5E-36 T 18-10-2018 CH53_1904 68393c4d96a11910a93a463d04561161 732 Pfam PF00270 DEAD/DEAH box helicase 219 364 7.9E-14 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CH53_1904 68393c4d96a11910a93a463d04561161 732 SMART SM00490 492 589 1.1E-7 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_1904 68393c4d96a11910a93a463d04561161 732 SMART SM00487 195 391 2.4E-17 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH53_1904 68393c4d96a11910a93a463d04561161 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 3.1E-205 T 18-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CH53_2843 4feefbfd662f1b469adae7ee6bbcc82f 619 Gene3D G3DSA:3.40.50.970 317 487 6.7E-68 T 18-10-2018 CH53_2843 4feefbfd662f1b469adae7ee6bbcc82f 619 SUPERFAMILY SSF52518 9 381 6.06E-77 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_2843 4feefbfd662f1b469adae7ee6bbcc82f 619 Gene3D G3DSA:3.40.50.920 494 619 7.9E-44 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CH53_2843 4feefbfd662f1b469adae7ee6bbcc82f 619 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 18-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CH53_2843 4feefbfd662f1b469adae7ee6bbcc82f 619 SUPERFAMILY SSF52922 490 618 3.66E-31 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CH53_2843 4feefbfd662f1b469adae7ee6bbcc82f 619 Pfam PF02780 Transketolase, C-terminal domain 494 610 3.5E-24 T 18-10-2018 IPR033248 Transketolase, C-terminal domain CH53_2843 4feefbfd662f1b469adae7ee6bbcc82f 619 SMART SM00861 319 483 3.1E-66 T 18-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CH53_2843 4feefbfd662f1b469adae7ee6bbcc82f 619 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 3.5E-117 T 18-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CH53_2843 4feefbfd662f1b469adae7ee6bbcc82f 619 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 0.0 T 18-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CH53_2843 4feefbfd662f1b469adae7ee6bbcc82f 619 SUPERFAMILY SSF52518 316 503 1.63E-59 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_2843 4feefbfd662f1b469adae7ee6bbcc82f 619 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 619 45.882 T 18-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CH53_2843 4feefbfd662f1b469adae7ee6bbcc82f 619 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 2.9E-39 T 18-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CH53_41 4df96fa5c64042bd67dea010ed5b2329 575 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 49.813 T 18-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 CH53_41 4df96fa5c64042bd67dea010ed5b2329 575 Gene3D G3DSA:1.20.1530.20 7 391 2.7E-16 T 18-10-2018 IPR038770 Sodium/solute symporter superfamily CH53_41 4df96fa5c64042bd67dea010ed5b2329 575 Pfam PF03471 Transporter associated domain 493 571 1.3E-14 T 18-10-2018 IPR005170 Transporter-associated domain CH53_41 4df96fa5c64042bd67dea010ed5b2329 575 SUPERFAMILY SSF56176 497 570 4.36E-13 T 18-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CH53_41 4df96fa5c64042bd67dea010ed5b2329 575 SMART SM01091 492 572 7.3E-22 T 18-10-2018 IPR005170 Transporter-associated domain CH53_41 4df96fa5c64042bd67dea010ed5b2329 575 Gene3D G3DSA:3.30.70.1450 408 484 1.1E-11 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_41 4df96fa5c64042bd67dea010ed5b2329 575 SUPERFAMILY SSF116726 420 483 9.55E-11 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_41 4df96fa5c64042bd67dea010ed5b2329 575 Pfam PF02080 TrkA-C domain 425 483 6.0E-12 T 18-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CH53_41 4df96fa5c64042bd67dea010ed5b2329 575 Pfam PF00999 Sodium/hydrogen exchanger family 15 387 4.5E-58 T 18-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CH53_41 4df96fa5c64042bd67dea010ed5b2329 575 Gene3D G3DSA:3.30.465.10 486 570 5.8E-11 T 18-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CH53_1482 e4854c3184f2f6bef7a38facf4b9e29c 232 SUPERFAMILY SSF54814 2 106 1.91E-37 T 18-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CH53_1482 e4854c3184f2f6bef7a38facf4b9e29c 232 Gene3D G3DSA:3.30.1140.32 108 208 3.9E-46 T 18-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1482 e4854c3184f2f6bef7a38facf4b9e29c 232 SMART SM00322 60 125 1.6E-6 T 18-10-2018 IPR004087 K Homology domain GO:0003676 CH53_1482 e4854c3184f2f6bef7a38facf4b9e29c 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.264 T 18-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CH53_1482 e4854c3184f2f6bef7a38facf4b9e29c 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 18-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1482 e4854c3184f2f6bef7a38facf4b9e29c 232 SUPERFAMILY SSF54821 108 206 6.93E-41 T 18-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1482 e4854c3184f2f6bef7a38facf4b9e29c 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.0E-41 T 18-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1482 e4854c3184f2f6bef7a38facf4b9e29c 232 Gene3D G3DSA:3.30.300.20 17 107 1.3E-29 T 18-10-2018 IPR015946 K homology domain-like, alpha/beta CH53_1482 e4854c3184f2f6bef7a38facf4b9e29c 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.3E-100 T 18-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CH53_1482 e4854c3184f2f6bef7a38facf4b9e29c 232 Pfam PF07650 KH domain 38 111 8.9E-19 T 18-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_334 c0d67bf7e67d9e9e7ce75edfeacb8d50 368 Pfam PF00267 Gram-negative porin 27 368 9.8E-142 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_334 c0d67bf7e67d9e9e7ce75edfeacb8d50 368 Gene3D G3DSA:2.40.160.10 22 368 1.9E-152 T 18-10-2018 IPR023614 Porin domain superfamily CH53_334 c0d67bf7e67d9e9e7ce75edfeacb8d50 368 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 320 336 - T 18-10-2018 IPR013793 Porin, Gram-negative type, conserved site CH53_334 c0d67bf7e67d9e9e7ce75edfeacb8d50 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 6.5E-16 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_334 c0d67bf7e67d9e9e7ce75edfeacb8d50 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 233 245 6.5E-16 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_334 c0d67bf7e67d9e9e7ce75edfeacb8d50 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 6.5E-16 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_334 c0d67bf7e67d9e9e7ce75edfeacb8d50 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 151 162 6.5E-16 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_334 c0d67bf7e67d9e9e7ce75edfeacb8d50 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 320 337 6.5E-16 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_334 c0d67bf7e67d9e9e7ce75edfeacb8d50 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 275 294 7.3E-70 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_334 c0d67bf7e67d9e9e7ce75edfeacb8d50 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 7.3E-70 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_334 c0d67bf7e67d9e9e7ce75edfeacb8d50 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 7.3E-70 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_334 c0d67bf7e67d9e9e7ce75edfeacb8d50 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 239 256 7.3E-70 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_334 c0d67bf7e67d9e9e7ce75edfeacb8d50 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 7.3E-70 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_334 c0d67bf7e67d9e9e7ce75edfeacb8d50 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 7.3E-70 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_334 c0d67bf7e67d9e9e7ce75edfeacb8d50 368 SUPERFAMILY SSF56935 22 368 3.4E-82 T 18-10-2018 CH53_246 829ada297953467a018b6d79aa2c190b 292 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 2.8E-155 T 18-10-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 CH53_246 829ada297953467a018b6d79aa2c190b 292 Gene3D G3DSA:3.20.20.70 1 285 3.1E-106 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_246 829ada297953467a018b6d79aa2c190b 292 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 18-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CH53_246 829ada297953467a018b6d79aa2c190b 292 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 84 - T 18-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CH53_246 829ada297953467a018b6d79aa2c190b 292 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 3.5E-109 T 18-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CH53_246 829ada297953467a018b6d79aa2c190b 292 SUPERFAMILY SSF51569 3 283 1.3E-96 T 18-10-2018 CH53_246 829ada297953467a018b6d79aa2c190b 292 PIRSF PIRSF001359 1 284 1.5E-113 T 18-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CH53_246 829ada297953467a018b6d79aa2c190b 292 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 283 1.4E-95 T 18-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CH53_2646 b3727027fdf907610f45bdd4df6a7250 796 SUPERFAMILY SSF74650 2 243 1.26E-46 T 18-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CH53_2646 b3727027fdf907610f45bdd4df6a7250 796 Pfam PF13802 Galactose mutarotase-like 146 213 3.1E-22 T 18-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain CH53_2646 b3727027fdf907610f45bdd4df6a7250 796 Gene3D G3DSA:3.20.20.80 244 627 7.9E-111 T 18-10-2018 CH53_2646 b3727027fdf907610f45bdd4df6a7250 796 SUPERFAMILY SSF51011 597 683 7.91E-18 T 18-10-2018 CH53_2646 b3727027fdf907610f45bdd4df6a7250 796 Pfam PF17137 Domain of unknown function (DUF5110) 705 772 1.9E-7 T 18-10-2018 IPR033403 Domain of unknown function DUF5110 CH53_2646 b3727027fdf907610f45bdd4df6a7250 796 Gene3D G3DSA:2.60.40.1760 10 242 3.5E-35 T 18-10-2018 CH53_2646 b3727027fdf907610f45bdd4df6a7250 796 Gene3D G3DSA:2.60.40.1180 630 684 5.9E-12 T 18-10-2018 IPR013780 Glycosyl hydrolase, all-beta CH53_2646 b3727027fdf907610f45bdd4df6a7250 796 Gene3D G3DSA:2.60.40.1180 685 794 1.4E-10 T 18-10-2018 IPR013780 Glycosyl hydrolase, all-beta CH53_2646 b3727027fdf907610f45bdd4df6a7250 796 SUPERFAMILY SSF51445 247 594 2.56E-65 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_2646 b3727027fdf907610f45bdd4df6a7250 796 Pfam PF01055 Glycosyl hydrolases family 31 238 687 9.6E-114 T 18-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 Gene3D G3DSA:3.30.310.50 370 446 2.2E-24 T 18-10-2018 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 3.8E-46 T 18-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 Gene3D G3DSA:3.40.120.10 257 339 3.9E-64 T 18-10-2018 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 18-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 SUPERFAMILY SSF53738 156 256 2.51E-30 T 18-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 SUPERFAMILY SSF53738 2 181 8.24E-50 T 18-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 SUPERFAMILY SSF53738 258 365 7.06E-31 T 18-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 Gene3D G3DSA:3.40.120.10 175 362 3.9E-64 T 18-10-2018 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 1.3E-194 T 18-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 3.2E-20 T 18-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 SUPERFAMILY SSF55957 357 445 4.71E-21 T 18-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 364 4.9E-32 T 18-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 2.8E-14 T 18-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 47.338 T 18-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.5E-14 T 18-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.5E-14 T 18-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.5E-14 T 18-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_1285 c14fb51f3048444ca5fda527333c8a71 446 Gene3D G3DSA:3.40.120.10 3 154 8.2E-49 T 18-10-2018 CH53_1016 819377d3dfab65c142cf56e2c1be756e 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 18-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_1016 819377d3dfab65c142cf56e2c1be756e 306 Gene3D G3DSA:3.30.470.20 85 301 1.0E-85 T 18-10-2018 CH53_1016 819377d3dfab65c142cf56e2c1be756e 306 SUPERFAMILY SSF56059 97 302 4.5E-60 T 18-10-2018 CH53_1016 819377d3dfab65c142cf56e2c1be756e 306 SUPERFAMILY SSF52440 3 96 2.3E-29 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CH53_1016 819377d3dfab65c142cf56e2c1be756e 306 PIRSF PIRSF039102 1 45 9.2E-9 T 18-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_1016 819377d3dfab65c142cf56e2c1be756e 306 PIRSF PIRSF039102 41 306 9.6E-95 T 18-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_1016 819377d3dfab65c142cf56e2c1be756e 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 302 4.3E-67 T 18-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_1016 819377d3dfab65c142cf56e2c1be756e 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 2.4E-110 T 18-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_1016 819377d3dfab65c142cf56e2c1be756e 306 Gene3D G3DSA:3.40.50.20 1 84 1.4E-32 T 18-10-2018 CH53_1016 819377d3dfab65c142cf56e2c1be756e 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 37.061 T 18-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_1016 819377d3dfab65c142cf56e2c1be756e 306 Gene3D G3DSA:3.30.1490.20 111 183 1.0E-85 T 18-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CH53_1016 819377d3dfab65c142cf56e2c1be756e 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 1.2E-17 T 18-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_1016 819377d3dfab65c142cf56e2c1be756e 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 18-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_3195 f622fb43f4ddc496cb1eb42ff0256789 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 4.4E-24 T 18-10-2018 CH53_3195 f622fb43f4ddc496cb1eb42ff0256789 81 Gene3D G3DSA:3.10.20.30 1 81 6.6E-26 T 18-10-2018 IPR012675 Beta-grasp domain superfamily CH53_3195 f622fb43f4ddc496cb1eb42ff0256789 81 SUPERFAMILY SSF54285 1 81 5.61E-22 T 18-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CH53_3195 f622fb43f4ddc496cb1eb42ff0256789 81 Pfam PF02597 ThiS family 4 81 6.1E-20 T 18-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 CH53_1018 bcb661cf2b7e2c8b5e3e100a76fd7241 356 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 349 9.2E-115 T 18-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_1018 bcb661cf2b7e2c8b5e3e100a76fd7241 356 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 355 35.498 T 18-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_1018 bcb661cf2b7e2c8b5e3e100a76fd7241 356 SUPERFAMILY SSF53756 6 353 2.4E-128 T 18-10-2018 CH53_1018 bcb661cf2b7e2c8b5e3e100a76fd7241 356 Gene3D G3DSA:3.40.50.2000 162 321 2.0E-122 T 18-10-2018 CH53_1018 bcb661cf2b7e2c8b5e3e100a76fd7241 356 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 8.4E-48 T 18-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_1018 bcb661cf2b7e2c8b5e3e100a76fd7241 356 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 328 3.1E-36 T 18-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 CH53_1018 bcb661cf2b7e2c8b5e3e100a76fd7241 356 Gene3D G3DSA:3.40.50.2000 9 161 2.0E-122 T 18-10-2018 CH53_3118 564fe3760028f22579b4b55aaf54fa36 175 Gene3D G3DSA:1.10.1220.10 1 40 3.1E-24 T 18-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CH53_3118 564fe3760028f22579b4b55aaf54fa36 175 PIRSF PIRSF019401 1 65 4.9E-17 T 18-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 CH53_3118 564fe3760028f22579b4b55aaf54fa36 175 PIRSF PIRSF019401 47 175 9.8E-32 T 18-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 CH53_3118 564fe3760028f22579b4b55aaf54fa36 175 SUPERFAMILY SSF47598 1 35 7.45E-14 T 18-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 CH53_3118 564fe3760028f22579b4b55aaf54fa36 175 Pfam PF17206 SeqA protein N-terminal domain 1 36 6.1E-24 T 18-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal CH53_3118 564fe3760028f22579b4b55aaf54fa36 175 SUPERFAMILY SSF82808 60 175 3.92E-48 T 18-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 CH53_3118 564fe3760028f22579b4b55aaf54fa36 175 Gene3D G3DSA:1.20.1380.10 62 175 1.6E-45 T 18-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 CH53_3118 564fe3760028f22579b4b55aaf54fa36 175 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 175 42.29 T 18-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 CH53_3118 564fe3760028f22579b4b55aaf54fa36 175 Pfam PF03925 SeqA protein C-terminal domain 65 173 1.0E-47 T 18-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CH53_625 5343f77a272c4dac596944e6d7a6058d 495 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 383 463 2.6E-25 T 18-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like CH53_625 5343f77a272c4dac596944e6d7a6058d 495 SUPERFAMILY SSF52540 4 168 8.26E-45 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_625 5343f77a272c4dac596944e6d7a6058d 495 SUPERFAMILY SSF52540 207 469 3.58E-58 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_625 5343f77a272c4dac596944e6d7a6058d 495 Pfam PF01926 50S ribosome-binding GTPase 5 119 7.8E-27 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_625 5343f77a272c4dac596944e6d7a6058d 495 Pfam PF01926 50S ribosome-binding GTPase 210 327 1.2E-23 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_625 5343f77a272c4dac596944e6d7a6058d 495 Gene3D G3DSA:3.30.300.20 383 465 1.5E-19 T 18-10-2018 IPR015946 K homology domain-like, alpha/beta CH53_625 5343f77a272c4dac596944e6d7a6058d 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.9E-9 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_625 5343f77a272c4dac596944e6d7a6058d 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 3.9E-9 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_625 5343f77a272c4dac596944e6d7a6058d 495 PIRSF PIRSF006485 1 471 3.6E-177 T 18-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 CH53_625 5343f77a272c4dac596944e6d7a6058d 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 207 371 6.1E-21 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CH53_625 5343f77a272c4dac596944e6d7a6058d 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 153 2.5E-20 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CH53_625 5343f77a272c4dac596944e6d7a6058d 495 Gene3D G3DSA:3.40.50.300 2 160 2.0E-42 T 18-10-2018 CH53_625 5343f77a272c4dac596944e6d7a6058d 495 SMART SM00382 1 176 2.5 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_625 5343f77a272c4dac596944e6d7a6058d 495 SMART SM00382 206 353 0.47 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_625 5343f77a272c4dac596944e6d7a6058d 495 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 463 1.3E-176 T 18-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 CH53_625 5343f77a272c4dac596944e6d7a6058d 495 Hamap MF_00195 GTPase Der [der]. 2 466 38.603 T 18-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 CH53_625 5343f77a272c4dac596944e6d7a6058d 495 Gene3D G3DSA:3.40.50.300 205 379 1.2E-47 T 18-10-2018 CH53_3130 26c55153a56442578e420a29c6b986b1 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 8.3E-70 T 18-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CH53_3130 26c55153a56442578e420a29c6b986b1 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 233 6.8E-56 T 18-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CH53_3130 26c55153a56442578e420a29c6b986b1 247 SUPERFAMILY SSF102705 1 246 1.14E-81 T 18-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CH53_3130 26c55153a56442578e420a29c6b986b1 247 Gene3D G3DSA:3.40.1390.30 14 232 9.6E-86 T 18-10-2018 CH53_3130 26c55153a56442578e420a29c6b986b1 247 Gene3D G3DSA:3.40.1390.30 97 218 9.6E-86 T 18-10-2018 CH53_3393 7c0af73dde2f1a291271e7ad2d557816 297 Pfam PF03466 LysR substrate binding domain 97 294 1.0E-24 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_3393 7c0af73dde2f1a291271e7ad2d557816 297 SUPERFAMILY SSF46785 9 90 3.92E-22 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3393 7c0af73dde2f1a291271e7ad2d557816 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 71 2.6E-20 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3393 7c0af73dde2f1a291271e7ad2d557816 297 SUPERFAMILY SSF53850 99 294 1.07E-23 T 18-10-2018 CH53_3393 7c0af73dde2f1a291271e7ad2d557816 297 Gene3D G3DSA:3.40.190.10 103 293 3.6E-37 T 18-10-2018 CH53_3393 7c0af73dde2f1a291271e7ad2d557816 297 Gene3D G3DSA:3.40.190.10 174 276 3.6E-37 T 18-10-2018 CH53_3393 7c0af73dde2f1a291271e7ad2d557816 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 4.8E-10 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3393 7c0af73dde2f1a291271e7ad2d557816 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 4.8E-10 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3393 7c0af73dde2f1a291271e7ad2d557816 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 4.8E-10 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3393 7c0af73dde2f1a291271e7ad2d557816 297 Gene3D G3DSA:1.10.10.10 6 92 1.6E-26 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 Pfam PF00072 Response regulator receiver domain 705 818 1.9E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 Gene3D G3DSA:1.10.287.130 349 460 8.1E-25 T 18-10-2018 CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 SMART SM00448 703 818 6.6E-33 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 SUPERFAMILY SSF47226 801 913 9.29E-8 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 613 5.7E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 573 5.7E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 559 5.7E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 594 5.7E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 SUPERFAMILY SSF52172 703 824 5.69E-34 T 18-10-2018 IPR011006 CheY-like superfamily CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 SMART SM00387 509 616 1.0E-30 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 510 614 5.3E-27 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 Gene3D G3DSA:3.40.50.2300 699 820 2.1E-34 T 18-10-2018 CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 SMART SM00388 397 462 8.3E-21 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 Gene3D G3DSA:1.20.120.160 842 925 6.3E-5 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 SUPERFAMILY SSF55874 451 614 1.96E-43 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 SUPERFAMILY SSF47384 383 464 1.47E-18 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 Pfam PF01627 Hpt domain 871 925 2.2E-5 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 Gene3D G3DSA:3.30.565.10 461 618 9.6E-41 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1436 ab275035a4d71976eff9ad398c8b0d77 940 Pfam PF00512 His Kinase A (phospho-acceptor) domain 402 462 6.5E-16 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_2998 b8b759627e5e3f3a55296fa6749d1e4f 127 Gene3D G3DSA:1.10.10.10 1 88 3.9E-12 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2998 b8b759627e5e3f3a55296fa6749d1e4f 127 Pfam PF00486 Transcriptional regulatory protein, C terminal 18 79 1.8E-7 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_2998 b8b759627e5e3f3a55296fa6749d1e4f 127 SUPERFAMILY SSF46894 5 85 1.02E-8 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_1353 5138cbad666510b457acca969078ee15 604 SUPERFAMILY SSF46977 444 583 2.22E-45 T 18-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_1353 5138cbad666510b457acca969078ee15 604 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 18-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 CH53_1353 5138cbad666510b457acca969078ee15 604 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.1E-5 T 18-10-2018 CH53_1353 5138cbad666510b457acca969078ee15 604 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 2.1E-5 T 18-10-2018 CH53_1353 5138cbad666510b457acca969078ee15 604 Gene3D G3DSA:3.50.50.60 7 409 3.3E-164 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1353 5138cbad666510b457acca969078ee15 604 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 9.3E-245 T 18-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_1353 5138cbad666510b457acca969078ee15 604 Pfam PF00890 FAD binding domain 7 397 2.2E-114 T 18-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_1353 5138cbad666510b457acca969078ee15 604 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 6.5E-10 T 18-10-2018 CH53_1353 5138cbad666510b457acca969078ee15 604 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.5E-10 T 18-10-2018 CH53_1353 5138cbad666510b457acca969078ee15 604 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 4.2E-38 T 18-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_1353 5138cbad666510b457acca969078ee15 604 Gene3D G3DSA:1.20.58.100 424 538 3.9E-35 T 18-10-2018 CH53_1353 5138cbad666510b457acca969078ee15 604 SUPERFAMILY SSF51905 3 418 5.77E-71 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1353 5138cbad666510b457acca969078ee15 604 PIRSF PIRSF000171 1 561 8.0E-41 T 18-10-2018 CH53_1353 5138cbad666510b457acca969078ee15 604 Gene3D G3DSA:3.90.700.10 237 363 3.3E-164 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_1353 5138cbad666510b457acca969078ee15 604 SUPERFAMILY SSF56425 227 358 2.99E-43 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_1353 5138cbad666510b457acca969078ee15 604 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 18-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_1353 5138cbad666510b457acca969078ee15 604 Gene3D G3DSA:4.10.80.40 543 577 1.7E-19 T 18-10-2018 CH53_3137 52e4c605b7c869753aeb5f4488795b05 428 Gene3D G3DSA:1.10.580.10 57 411 1.6E-152 T 18-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CH53_3137 52e4c605b7c869753aeb5f4488795b05 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 18-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CH53_3137 52e4c605b7c869753aeb5f4488795b05 428 PIRSF PIRSF001369 38 428 7.9E-174 T 18-10-2018 IPR024176 Citrate synthase, bacterial-type CH53_3137 52e4c605b7c869753aeb5f4488795b05 428 Gene3D G3DSA:1.10.230.10 268 377 1.6E-152 T 18-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain CH53_3137 52e4c605b7c869753aeb5f4488795b05 428 SUPERFAMILY SSF48256 4 423 4.58E-167 T 18-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 CH53_3137 52e4c605b7c869753aeb5f4488795b05 428 PRINTS PR00143 Citrate synthase signature 165 178 5.5E-56 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 CH53_3137 52e4c605b7c869753aeb5f4488795b05 428 PRINTS PR00143 Citrate synthase signature 219 234 5.5E-56 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 CH53_3137 52e4c605b7c869753aeb5f4488795b05 428 PRINTS PR00143 Citrate synthase signature 360 376 5.5E-56 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 CH53_3137 52e4c605b7c869753aeb5f4488795b05 428 PRINTS PR00143 Citrate synthase signature 241 269 5.5E-56 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 CH53_3137 52e4c605b7c869753aeb5f4488795b05 428 PRINTS PR00143 Citrate synthase signature 380 394 5.5E-56 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 CH53_3137 52e4c605b7c869753aeb5f4488795b05 428 PRINTS PR00143 Citrate synthase signature 296 316 5.5E-56 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 CH53_3137 52e4c605b7c869753aeb5f4488795b05 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 411 2.8E-134 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 CH53_3137 52e4c605b7c869753aeb5f4488795b05 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 422 4.2E-237 T 18-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 CH53_3137 52e4c605b7c869753aeb5f4488795b05 428 Gene3D G3DSA:2.20.28.60 1 50 1.2E-21 T 18-10-2018 CH53_560 479e75f6a76f901c0fe77266dfe08542 209 SMART SM00421 146 203 7.1E-25 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_560 479e75f6a76f901c0fe77266dfe08542 209 SUPERFAMILY SSF52172 4 136 7.83E-35 T 18-10-2018 IPR011006 CheY-like superfamily CH53_560 479e75f6a76f901c0fe77266dfe08542 209 Pfam PF00072 Response regulator receiver domain 7 118 1.5E-28 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_560 479e75f6a76f901c0fe77266dfe08542 209 SUPERFAMILY SSF46894 129 206 5.1E-22 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_560 479e75f6a76f901c0fe77266dfe08542 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_560 479e75f6a76f901c0fe77266dfe08542 209 Gene3D G3DSA:3.40.50.12740 6 207 1.1E-66 T 18-10-2018 CH53_560 479e75f6a76f901c0fe77266dfe08542 209 SMART SM00448 5 118 3.3E-33 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_560 479e75f6a76f901c0fe77266dfe08542 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 1.3E-22 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_560 479e75f6a76f901c0fe77266dfe08542 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.2E-15 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_560 479e75f6a76f901c0fe77266dfe08542 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.2E-15 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_560 479e75f6a76f901c0fe77266dfe08542 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.2E-15 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2873 8ae8678f932d94dde6dba320335bb796 588 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2873 8ae8678f932d94dde6dba320335bb796 588 Pfam PF00664 ABC transporter transmembrane region 21 291 4.5E-38 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CH53_2873 8ae8678f932d94dde6dba320335bb796 588 SMART SM00382 361 547 9.0E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2873 8ae8678f932d94dde6dba320335bb796 588 SUPERFAMILY SSF90123 7 323 1.7E-71 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_2873 8ae8678f932d94dde6dba320335bb796 588 SUPERFAMILY SSF52540 326 572 2.09E-79 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2873 8ae8678f932d94dde6dba320335bb796 588 Gene3D G3DSA:1.20.1560.10 2 319 1.5E-74 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_2873 8ae8678f932d94dde6dba320335bb796 588 Pfam PF00005 ABC transporter 352 500 2.0E-28 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2873 8ae8678f932d94dde6dba320335bb796 588 Gene3D G3DSA:3.40.50.300 328 586 7.9E-78 T 18-10-2018 CH53_2507 1f2526409bd73680a7545338f8b93171 153 PIRSF PIRSF036409 1 148 2.1E-45 T 18-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CH53_2507 1f2526409bd73680a7545338f8b93171 153 Gene3D G3DSA:3.40.50.300 1 152 1.1E-13 T 18-10-2018 CH53_2507 1f2526409bd73680a7545338f8b93171 153 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 3 143 3.9E-43 T 18-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CH53_2507 1f2526409bd73680a7545338f8b93171 153 SUPERFAMILY SSF52540 3 137 1.92E-14 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2507 1f2526409bd73680a7545338f8b93171 153 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 143 1.2E-26 T 18-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CH53_775 b63f29d59eaf643d924725c48a613b70 183 Pfam PF11659 Protein of unknown function (DUF3261) 44 182 2.5E-38 T 18-10-2018 IPR021675 Protein of unknown function DUF3261 CH53_1716 d5d9c9669b2a17d6c08e458e87368515 232 SMART SM00345 12 71 3.6E-12 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1716 d5d9c9669b2a17d6c08e458e87368515 232 SUPERFAMILY SSF46785 5 75 5.3E-17 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1716 d5d9c9669b2a17d6c08e458e87368515 232 Gene3D G3DSA:1.10.10.10 2 72 4.1E-17 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1716 d5d9c9669b2a17d6c08e458e87368515 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 2.8E-14 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1716 d5d9c9669b2a17d6c08e458e87368515 232 Pfam PF07729 FCD domain 102 221 4.5E-24 T 18-10-2018 IPR011711 GntR, C-terminal CH53_1716 d5d9c9669b2a17d6c08e458e87368515 232 SMART SM00895 100 223 1.6E-16 T 18-10-2018 IPR011711 GntR, C-terminal CH53_1716 d5d9c9669b2a17d6c08e458e87368515 232 Gene3D G3DSA:1.20.120.530 86 231 3.4E-26 T 18-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CH53_1716 d5d9c9669b2a17d6c08e458e87368515 232 SUPERFAMILY SSF48008 101 230 7.32E-24 T 18-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CH53_2841 b2e4225b2831fa843db46285bfe36b52 329 Gene3D G3DSA:3.30.1330.10 2 144 1.2E-45 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CH53_2841 b2e4225b2831fa843db46285bfe36b52 329 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 5.9E-116 T 18-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CH53_2841 b2e4225b2831fa843db46285bfe36b52 329 PIRSF PIRSF005303 1 322 1.6E-89 T 18-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CH53_2841 b2e4225b2831fa843db46285bfe36b52 329 SUPERFAMILY SSF56042 143 305 5.53E-41 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CH53_2841 b2e4225b2831fa843db46285bfe36b52 329 Gene3D G3DSA:3.90.650.10 145 323 9.7E-58 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CH53_2841 b2e4225b2831fa843db46285bfe36b52 329 SUPERFAMILY SSF55326 4 138 1.31E-34 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CH53_2841 b2e4225b2831fa843db46285bfe36b52 329 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 4.8E-22 T 18-10-2018 IPR016188 PurM-like, N-terminal domain CH53_2841 b2e4225b2831fa843db46285bfe36b52 329 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 300 5.4E-10 T 18-10-2018 IPR010918 PurM-like, C-terminal domain CH53_2841 b2e4225b2831fa843db46285bfe36b52 329 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 322 29.396 T 18-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CH53_3962 9dec8fd4b3d52a03d2a5158a44072186 310 SUPERFAMILY SSF56596 5 307 1.18E-119 T 18-10-2018 IPR036384 Replication terminator Tus superfamily GO:0003677|GO:0005737|GO:0006274 CH53_3962 9dec8fd4b3d52a03d2a5158a44072186 310 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 308 6.5E-163 T 18-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CH53_3962 9dec8fd4b3d52a03d2a5158a44072186 310 Gene3D G3DSA:3.30.54.10 174 306 1.9E-118 T 18-10-2018 CH53_3962 9dec8fd4b3d52a03d2a5158a44072186 310 Gene3D G3DSA:3.50.14.10 14 281 1.9E-118 T 18-10-2018 IPR036381 Replication terminator Tus, domain 1 GO:0003677|GO:0005737|GO:0006274 CH53_3962 9dec8fd4b3d52a03d2a5158a44072186 310 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 4.6E-138 T 18-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CH53_3962 9dec8fd4b3d52a03d2a5158a44072186 310 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 44.339 T 18-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CH53_1020 561cc7da45f93b3ae2900e3a04bf9482 438 Gene3D G3DSA:3.40.1190.10 94 299 9.3E-81 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CH53_1020 561cc7da45f93b3ae2900e3a04bf9482 438 SUPERFAMILY SSF51984 3 94 3.92E-24 T 18-10-2018 CH53_1020 561cc7da45f93b3ae2900e3a04bf9482 438 Pfam PF08245 Mur ligase middle domain 110 280 4.3E-27 T 18-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CH53_1020 561cc7da45f93b3ae2900e3a04bf9482 438 SUPERFAMILY SSF53623 95 297 8.11E-57 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CH53_1020 561cc7da45f93b3ae2900e3a04bf9482 438 SUPERFAMILY SSF53244 299 437 1.33E-49 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CH53_1020 561cc7da45f93b3ae2900e3a04bf9482 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 34.537 T 18-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CH53_1020 561cc7da45f93b3ae2900e3a04bf9482 438 Gene3D G3DSA:3.40.50.720 2 93 3.3E-25 T 18-10-2018 CH53_1020 561cc7da45f93b3ae2900e3a04bf9482 438 Gene3D G3DSA:3.90.190.20 300 434 1.2E-44 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CH53_1020 561cc7da45f93b3ae2900e3a04bf9482 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 358 6.0E-8 T 18-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CH53_1020 561cc7da45f93b3ae2900e3a04bf9482 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 2.2E-127 T 18-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CH53_2247 d90507e9dcad3af95389a9118cf59d14 181 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 25 164 1.4E-47 T 18-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CH53_2247 d90507e9dcad3af95389a9118cf59d14 181 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 5 165 25.163 T 18-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CH53_2247 d90507e9dcad3af95389a9118cf59d14 181 Gene3D G3DSA:2.60.450.10 25 162 1.0E-49 T 18-10-2018 CH53_2247 d90507e9dcad3af95389a9118cf59d14 181 Pfam PF03968 OstA-like protein 36 146 5.9E-28 T 18-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal CH53_3895 6f974bd1433214c5e0c796e7909c3a34 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 18-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CH53_3895 6f974bd1433214c5e0c796e7909c3a34 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 48.923 T 18-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CH53_3895 6f974bd1433214c5e0c796e7909c3a34 396 Gene3D G3DSA:3.40.50.1100 9 204 3.9E-181 T 18-10-2018 CH53_3895 6f974bd1433214c5e0c796e7909c3a34 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 388 7.2E-188 T 18-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CH53_3895 6f974bd1433214c5e0c796e7909c3a34 396 Gene3D G3DSA:3.40.50.1100 53 383 3.9E-181 T 18-10-2018 CH53_3895 6f974bd1433214c5e0c796e7909c3a34 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 375 8.5E-49 T 18-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CH53_3895 6f974bd1433214c5e0c796e7909c3a34 396 PIRSF PIRSF001413 1 396 8.5E-169 T 18-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CH53_3895 6f974bd1433214c5e0c796e7909c3a34 396 SUPERFAMILY SSF53686 4 389 9.95E-142 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH53_4201 6184fe1cb3e9f6786860da43585b0a7a 227 Pfam PF01381 Helix-turn-helix 33 73 1.6E-8 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_4201 6184fe1cb3e9f6786860da43585b0a7a 227 SMART SM00530 14 73 3.2E-4 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_4201 6184fe1cb3e9f6786860da43585b0a7a 227 Gene3D G3DSA:2.10.109.10 92 226 2.6E-47 T 18-10-2018 CH53_4201 6184fe1cb3e9f6786860da43585b0a7a 227 SUPERFAMILY SSF51306 97 221 8.55E-28 T 18-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CH53_4201 6184fe1cb3e9f6786860da43585b0a7a 227 Gene3D G3DSA:1.10.260.40 7 78 2.6E-9 T 18-10-2018 CH53_4201 6184fe1cb3e9f6786860da43585b0a7a 227 SUPERFAMILY SSF47413 5 78 1.45E-6 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_4201 6184fe1cb3e9f6786860da43585b0a7a 227 Pfam PF00717 Peptidase S24-like 138 211 1.7E-15 T 18-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CH53_1357 7b558f32aa48bf1c6c2d6a7a2d3e4fb8 182 Pfam PF08212 Lipocalin-like domain 34 173 5.1E-43 T 18-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CH53_1357 7b558f32aa48bf1c6c2d6a7a2d3e4fb8 182 PRINTS PR01171 Bacterial lipocalin signature 33 47 4.7E-42 T 18-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CH53_1357 7b558f32aa48bf1c6c2d6a7a2d3e4fb8 182 PRINTS PR01171 Bacterial lipocalin signature 103 117 4.7E-42 T 18-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CH53_1357 7b558f32aa48bf1c6c2d6a7a2d3e4fb8 182 PRINTS PR01171 Bacterial lipocalin signature 50 66 4.7E-42 T 18-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CH53_1357 7b558f32aa48bf1c6c2d6a7a2d3e4fb8 182 PRINTS PR01171 Bacterial lipocalin signature 162 172 4.7E-42 T 18-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CH53_1357 7b558f32aa48bf1c6c2d6a7a2d3e4fb8 182 PRINTS PR01171 Bacterial lipocalin signature 69 78 4.7E-42 T 18-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CH53_1357 7b558f32aa48bf1c6c2d6a7a2d3e4fb8 182 PRINTS PR01171 Bacterial lipocalin signature 120 128 4.7E-42 T 18-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CH53_1357 7b558f32aa48bf1c6c2d6a7a2d3e4fb8 182 PRINTS PR01171 Bacterial lipocalin signature 135 146 4.7E-42 T 18-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CH53_1357 7b558f32aa48bf1c6c2d6a7a2d3e4fb8 182 PIRSF PIRSF036893 1 181 3.0E-49 T 18-10-2018 IPR022271 Lipocalin, ApoD type CH53_1357 7b558f32aa48bf1c6c2d6a7a2d3e4fb8 182 ProSitePatterns PS00213 Lipocalin signature. 32 45 - T 18-10-2018 IPR022272 Lipocalin family conserved site CH53_1357 7b558f32aa48bf1c6c2d6a7a2d3e4fb8 182 SUPERFAMILY SSF50814 9 176 1.87E-51 T 18-10-2018 IPR012674 Calycin CH53_1357 7b558f32aa48bf1c6c2d6a7a2d3e4fb8 182 Gene3D G3DSA:2.40.128.20 5 176 1.4E-56 T 18-10-2018 IPR012674 Calycin CH53_464 8cfaa3459869afad90671817e9502910 476 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 18-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CH53_464 8cfaa3459869afad90671817e9502910 476 SUPERFAMILY SSF51445 5 473 1.21E-161 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_464 8cfaa3459869afad90671817e9502910 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 3.8E-16 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_464 8cfaa3459869afad90671817e9502910 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 3.8E-16 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_464 8cfaa3459869afad90671817e9502910 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 3.8E-16 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_464 8cfaa3459869afad90671817e9502910 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 412 429 3.8E-16 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_464 8cfaa3459869afad90671817e9502910 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 437 449 3.8E-16 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_464 8cfaa3459869afad90671817e9502910 476 Gene3D G3DSA:3.20.20.80 2 475 6.6E-156 T 18-10-2018 CH53_464 8cfaa3459869afad90671817e9502910 476 Pfam PF00232 Glycosyl hydrolase family 1 4 472 4.6E-134 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_464 8cfaa3459869afad90671817e9502910 476 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 18-10-2018 IPR018120 Glycoside hydrolase family 1, active site CH53_1657 f53e8dfc1472d057112e7e92cd083481 563 Gene3D G3DSA:3.40.1770.10 17 542 4.2E-263 T 18-10-2018 CH53_1657 f53e8dfc1472d057112e7e92cd083481 563 Pfam PF01175 Urocanase Rossmann-like domain 141 349 2.2E-87 T 18-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CH53_1657 f53e8dfc1472d057112e7e92cd083481 563 Pfam PF17391 Urocanase N-terminal domain 12 138 2.1E-62 T 18-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CH53_1657 f53e8dfc1472d057112e7e92cd083481 563 ProSitePatterns PS01233 Urocanase signature. 442 457 - T 18-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CH53_1657 f53e8dfc1472d057112e7e92cd083481 563 Hamap MF_00577 Urocanate hydratase [hutU]. 3 556 50.483 T 18-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CH53_1657 f53e8dfc1472d057112e7e92cd083481 563 PIRSF PIRSF001423 2 561 5.2E-295 T 18-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CH53_1657 f53e8dfc1472d057112e7e92cd083481 563 SUPERFAMILY SSF111326 7 555 4.71E-263 T 18-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CH53_1657 f53e8dfc1472d057112e7e92cd083481 563 Gene3D G3DSA:3.40.50.10730 142 349 4.2E-263 T 18-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CH53_1657 f53e8dfc1472d057112e7e92cd083481 563 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 554 0.0 T 18-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CH53_1657 f53e8dfc1472d057112e7e92cd083481 563 Pfam PF17392 Urocanase C-terminal domain 352 546 1.5E-92 T 18-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CH53_2073 fa3bf46e059a6f16a1cb3d8eb571564c 204 SUPERFAMILY SSF54980 136 203 5.76E-17 T 18-10-2018 IPR035647 EF-G domain III/V-like CH53_2073 fa3bf46e059a6f16a1cb3d8eb571564c 204 SUPERFAMILY SSF54211 2 130 1.52E-42 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_2073 fa3bf46e059a6f16a1cb3d8eb571564c 204 Gene3D G3DSA:3.30.230.30 1 134 3.4E-52 T 18-10-2018 IPR036956 Impact, N-terminal domain superfamily CH53_2073 fa3bf46e059a6f16a1cb3d8eb571564c 204 Gene3D G3DSA:3.30.70.240 135 204 3.4E-30 T 18-10-2018 CH53_2073 fa3bf46e059a6f16a1cb3d8eb571564c 204 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 4.8E-28 T 18-10-2018 IPR001498 Impact, N-terminal CH53_2073 fa3bf46e059a6f16a1cb3d8eb571564c 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 18-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CH53_2073 fa3bf46e059a6f16a1cb3d8eb571564c 204 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 1.3E-13 T 18-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CH53_2073 fa3bf46e059a6f16a1cb3d8eb571564c 204 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 200 2.1E-76 T 18-10-2018 IPR015796 Impact family, bacterial/archaeal CH53_2317 53420139c9c2879f1a288e1a69ea7412 152 Gene3D G3DSA:1.10.10.10 6 152 3.8E-41 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2317 53420139c9c2879f1a288e1a69ea7412 152 SUPERFAMILY SSF46785 11 144 8.91E-37 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2317 53420139c9c2879f1a288e1a69ea7412 152 Pfam PF01638 HxlR-like helix-turn-helix 22 107 4.3E-20 T 18-10-2018 IPR002577 Helix-turn-helix, HxlR type CH53_3430 852f28379b1e6addb9fca36c9dbee9f5 246 SUPERFAMILY SSF49584 137 237 1.7E-15 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_3430 852f28379b1e6addb9fca36c9dbee9f5 246 Gene3D G3DSA:2.60.40.10 148 244 6.5E-19 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_3430 852f28379b1e6addb9fca36c9dbee9f5 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 20 143 7.4E-43 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_3430 852f28379b1e6addb9fca36c9dbee9f5 246 PRINTS PR00969 Pili chaperone signature 21 30 7.4E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3430 852f28379b1e6addb9fca36c9dbee9f5 246 PRINTS PR00969 Pili chaperone signature 164 179 7.4E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3430 852f28379b1e6addb9fca36c9dbee9f5 246 PRINTS PR00969 Pili chaperone signature 98 115 7.4E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3430 852f28379b1e6addb9fca36c9dbee9f5 246 PRINTS PR00969 Pili chaperone signature 70 91 7.4E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3430 852f28379b1e6addb9fca36c9dbee9f5 246 PRINTS PR00969 Pili chaperone signature 125 140 7.4E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3430 852f28379b1e6addb9fca36c9dbee9f5 246 Gene3D G3DSA:2.60.40.10 22 144 1.1E-41 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_3430 852f28379b1e6addb9fca36c9dbee9f5 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 170 235 1.8E-14 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_3430 852f28379b1e6addb9fca36c9dbee9f5 246 SUPERFAMILY SSF49354 16 143 4.19E-40 T 18-10-2018 IPR008962 PapD-like superfamily CH53_3430 852f28379b1e6addb9fca36c9dbee9f5 246 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 97 114 - T 18-10-2018 IPR018046 Pili assembly chaperone, conserved site CH53_2014 8bd34163503a3a0265c1d1e43fa08f08 368 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 41 356 1.2E-71 T 18-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CH53_2014 8bd34163503a3a0265c1d1e43fa08f08 368 Gene3D G3DSA:3.20.20.190 34 362 2.0E-133 T 18-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CH53_2014 8bd34163503a3a0265c1d1e43fa08f08 368 SUPERFAMILY SSF51695 37 361 3.92E-90 T 18-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CH53_1774 fb7786ab362cf67342a12597eb194d21 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 2.1E-8 T 18-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1774 fb7786ab362cf67342a12597eb194d21 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 2.1E-8 T 18-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1774 fb7786ab362cf67342a12597eb194d21 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 2.1E-8 T 18-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1774 fb7786ab362cf67342a12597eb194d21 79 Pfam PF00137 ATP synthase subunit C 11 69 9.9E-10 T 18-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CH53_1774 fb7786ab362cf67342a12597eb194d21 79 SUPERFAMILY SSF81333 3 77 2.75E-18 T 18-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily CH53_1774 fb7786ab362cf67342a12597eb194d21 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 18-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CH53_1774 fb7786ab362cf67342a12597eb194d21 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 18-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1774 fb7786ab362cf67342a12597eb194d21 79 Gene3D G3DSA:1.20.20.10 1 79 2.4E-34 T 18-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1774 fb7786ab362cf67342a12597eb194d21 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 14.452 T 18-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_4389 8569bc8e685ad09e9601052d88a0bf3c 425 SUPERFAMILY SSF53383 1 421 1.01E-135 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_4389 8569bc8e685ad09e9601052d88a0bf3c 425 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 2 420 1.5E-208 T 18-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 CH53_4389 8569bc8e685ad09e9601052d88a0bf3c 425 Gene3D G3DSA:3.40.640.10 1 285 6.1E-107 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_4389 8569bc8e685ad09e9601052d88a0bf3c 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CH53_4389 8569bc8e685ad09e9601052d88a0bf3c 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 2.5E-146 T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CH53_4389 8569bc8e685ad09e9601052d88a0bf3c 425 PIRSF PIRSF001434 1 424 3.7E-134 T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CH53_4389 8569bc8e685ad09e9601052d88a0bf3c 425 Gene3D G3DSA:3.90.1150.10 289 425 2.0E-52 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_3940 bfd19939c2d06d19786918fe2f2739f7 464 Gene3D G3DSA:1.10.287.470 123 208 7.8E-6 T 18-10-2018 CH53_3940 bfd19939c2d06d19786918fe2f2739f7 464 Gene3D G3DSA:2.40.50.100 89 209 7.8E-6 T 18-10-2018 CH53_3940 bfd19939c2d06d19786918fe2f2739f7 464 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 385 408 4.1E-58 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_3940 bfd19939c2d06d19786918fe2f2739f7 464 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 4.1E-58 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_3940 bfd19939c2d06d19786918fe2f2739f7 464 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 328 349 4.1E-58 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_3940 bfd19939c2d06d19786918fe2f2739f7 464 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 361 385 4.1E-58 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_3940 bfd19939c2d06d19786918fe2f2739f7 464 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 4.1E-58 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_3940 bfd19939c2d06d19786918fe2f2739f7 464 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 101 121 4.1E-58 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_3940 bfd19939c2d06d19786918fe2f2739f7 464 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 59 82 4.1E-58 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_3940 bfd19939c2d06d19786918fe2f2739f7 464 Pfam PF13533 Biotin-lipoyl like 93 130 5.6E-8 T 18-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CH53_3940 bfd19939c2d06d19786918fe2f2739f7 464 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 18-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 CH53_3940 bfd19939c2d06d19786918fe2f2739f7 464 Gene3D G3DSA:2.40.30.170 331 446 1.3E-11 T 18-10-2018 CH53_3940 bfd19939c2d06d19786918fe2f2739f7 464 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 50 464 7.2E-118 T 18-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 CH53_3940 bfd19939c2d06d19786918fe2f2739f7 464 Pfam PF13437 HlyD family secretion protein 316 424 6.5E-16 T 18-10-2018 CH53_2335 b85b2e6f57b6246de7974428719a7a82 952 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 276 6.8E-94 T 18-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CH53_2335 b85b2e6f57b6246de7974428719a7a82 952 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 553 804 4.6E-98 T 18-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CH53_2335 b85b2e6f57b6246de7974428719a7a82 952 Gene3D G3DSA:1.20.120.330 812 946 5.1E-46 T 18-10-2018 CH53_2335 b85b2e6f57b6246de7974428719a7a82 952 Gene3D G3DSA:1.20.120.1510 450 561 3.0E-32 T 18-10-2018 CH53_2335 b85b2e6f57b6246de7974428719a7a82 952 SUPERFAMILY SSF81301 525 813 4.69E-89 T 18-10-2018 CH53_2335 b85b2e6f57b6246de7974428719a7a82 952 Gene3D G3DSA:3.30.460.100 562 811 1.5E-98 T 18-10-2018 CH53_2335 b85b2e6f57b6246de7974428719a7a82 952 SUPERFAMILY SSF81593 815 943 3.69E-32 T 18-10-2018 CH53_2335 b85b2e6f57b6246de7974428719a7a82 952 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 27 945 19.658 T 18-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 CH53_2335 b85b2e6f57b6246de7974428719a7a82 952 Pfam PF08335 GlnD PII-uridylyltransferase 825 917 6.2E-10 T 18-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CH53_2335 b85b2e6f57b6246de7974428719a7a82 952 Pfam PF08335 GlnD PII-uridylyltransferase 297 436 3.4E-46 T 18-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CH53_2335 b85b2e6f57b6246de7974428719a7a82 952 Gene3D G3DSA:3.30.460.10 112 284 4.0E-67 T 18-10-2018 CH53_2335 b85b2e6f57b6246de7974428719a7a82 952 SUPERFAMILY SSF81301 11 286 9.81E-91 T 18-10-2018 CH53_2335 b85b2e6f57b6246de7974428719a7a82 952 Gene3D G3DSA:1.10.4050.10 1 109 1.3E-29 T 18-10-2018 CH53_2335 b85b2e6f57b6246de7974428719a7a82 952 Gene3D G3DSA:1.20.120.330 285 440 2.7E-57 T 18-10-2018 CH53_2335 b85b2e6f57b6246de7974428719a7a82 952 SUPERFAMILY SSF81593 287 436 4.47E-44 T 18-10-2018 CH53_490 2d302d6261446fe37f0856ae47c8dbfa 281 Gene3D G3DSA:1.10.1790.10 167 275 5.8E-37 T 18-10-2018 CH53_490 2d302d6261446fe37f0856ae47c8dbfa 281 SMART SM01061 1 59 8.1E-28 T 18-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 CH53_490 2d302d6261446fe37f0856ae47c8dbfa 281 SUPERFAMILY SSF63520 170 273 7.72E-26 T 18-10-2018 IPR036634 PRD domain superfamily GO:0006355 CH53_490 2d302d6261446fe37f0856ae47c8dbfa 281 ProSitePatterns PS00654 PRD domain signature. 97 109 - T 18-10-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 CH53_490 2d302d6261446fe37f0856ae47c8dbfa 281 Gene3D G3DSA:1.10.1790.10 65 165 6.8E-33 T 18-10-2018 CH53_490 2d302d6261446fe37f0856ae47c8dbfa 281 SUPERFAMILY SSF63520 58 165 4.32E-27 T 18-10-2018 IPR036634 PRD domain superfamily GO:0006355 CH53_490 2d302d6261446fe37f0856ae47c8dbfa 281 Pfam PF00874 PRD domain 179 271 1.3E-18 T 18-10-2018 IPR011608 PRD domain GO:0006355 CH53_490 2d302d6261446fe37f0856ae47c8dbfa 281 Pfam PF00874 PRD domain 78 162 4.1E-22 T 18-10-2018 IPR011608 PRD domain GO:0006355 CH53_490 2d302d6261446fe37f0856ae47c8dbfa 281 SUPERFAMILY SSF50151 1 54 8.89E-18 T 18-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 CH53_490 2d302d6261446fe37f0856ae47c8dbfa 281 Gene3D G3DSA:2.30.24.10 1 55 6.1E-24 T 18-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 CH53_490 2d302d6261446fe37f0856ae47c8dbfa 281 Pfam PF03123 CAT RNA binding domain 1 54 7.5E-23 T 18-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 CH53_812 bf139aeca03f37a2e611a5951e3d2f10 171 Gene3D G3DSA:3.30.1360.80 1 171 5.6E-73 T 18-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CH53_812 bf139aeca03f37a2e611a5951e3d2f10 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 1.0E-81 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CH53_812 bf139aeca03f37a2e611a5951e3d2f10 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.671 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CH53_812 bf139aeca03f37a2e611a5951e3d2f10 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 3.1E-62 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CH53_812 bf139aeca03f37a2e611a5951e3d2f10 171 PIRSF PIRSF006160 1 162 2.6E-66 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CH53_812 bf139aeca03f37a2e611a5951e3d2f10 171 SUPERFAMILY SSF63411 4 162 1.47E-67 T 18-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CH53_812 bf139aeca03f37a2e611a5951e3d2f10 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 3.1E-50 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CH53_812 bf139aeca03f37a2e611a5951e3d2f10 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 3.1E-50 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CH53_812 bf139aeca03f37a2e611a5951e3d2f10 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 3.1E-50 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CH53_812 bf139aeca03f37a2e611a5951e3d2f10 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 3.1E-50 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CH53_812 bf139aeca03f37a2e611a5951e3d2f10 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 3.1E-50 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CH53_2065 9faf6162f6ec01e1e18ff4bf283116e6 260 Hamap MF_00901 3'-5' ssDNA/RNA exonuclease TatD [tatD]. 1 260 64.07 T 18-10-2018 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 CH53_2065 9faf6162f6ec01e1e18ff4bf283116e6 260 Pfam PF01026 TatD related DNase 2 257 2.4E-66 T 18-10-2018 IPR001130 TatD family GO:0016788 CH53_2065 9faf6162f6ec01e1e18ff4bf283116e6 260 PIRSF PIRSF005902 1 260 4.3E-73 T 18-10-2018 IPR001130 TatD family GO:0016788 CH53_2065 9faf6162f6ec01e1e18ff4bf283116e6 260 SUPERFAMILY SSF51556 1 259 8.22E-80 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_2065 9faf6162f6ec01e1e18ff4bf283116e6 260 Gene3D G3DSA:3.20.20.140 1 260 6.0E-96 T 18-10-2018 CH53_2065 9faf6162f6ec01e1e18ff4bf283116e6 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 18-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CH53_2065 9faf6162f6ec01e1e18ff4bf283116e6 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 18-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CH53_2528 fc1065db0f3f9222b97cd2134cdf1b28 478 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 356 474 1.4E-22 T 18-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal CH53_2528 fc1065db0f3f9222b97cd2134cdf1b28 478 SUPERFAMILY SSF49899 329 477 1.9E-30 T 18-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CH53_2528 fc1065db0f3f9222b97cd2134cdf1b28 478 Gene3D G3DSA:2.115.10.20 1 345 1.8E-128 T 18-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CH53_2528 fc1065db0f3f9222b97cd2134cdf1b28 478 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 28 328 2.3E-103 T 18-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal CH53_2528 fc1065db0f3f9222b97cd2134cdf1b28 478 SMART SM00640 28 440 5.8E-146 T 18-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 CH53_2528 fc1065db0f3f9222b97cd2134cdf1b28 478 SUPERFAMILY SSF75005 20 329 1.05E-112 T 18-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CH53_2528 fc1065db0f3f9222b97cd2134cdf1b28 478 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 18 451 1.0E-139 T 18-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 CH53_2528 fc1065db0f3f9222b97cd2134cdf1b28 478 Gene3D G3DSA:2.60.120.560 346 476 2.6E-27 T 18-10-2018 CH53_1788 e2550825c53b91b4ced642de5b2186d1 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 2.4E-52 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_2760 03d95001dc989c7d97a29ad14172776a 880 SUPERFAMILY SSF56059 481 690 1.06E-25 T 18-10-2018 CH53_2760 03d95001dc989c7d97a29ad14172776a 880 Gene3D G3DSA:3.40.50.720 2 130 5.8E-30 T 18-10-2018 CH53_2760 03d95001dc989c7d97a29ad14172776a 880 Gene3D G3DSA:3.30.470.20 479 690 1.1E-55 T 18-10-2018 CH53_2760 03d95001dc989c7d97a29ad14172776a 880 SUPERFAMILY SSF52210 125 286 8.77E-37 T 18-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CH53_2760 03d95001dc989c7d97a29ad14172776a 880 Gene3D G3DSA:3.40.50.261 285 455 4.1E-44 T 18-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CH53_2760 03d95001dc989c7d97a29ad14172776a 880 SUPERFAMILY SSF55729 614 866 1.1E-21 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_2760 03d95001dc989c7d97a29ad14172776a 880 Pfam PF00583 Acetyltransferase (GNAT) family 761 863 1.5E-11 T 18-10-2018 IPR000182 GNAT domain CH53_2760 03d95001dc989c7d97a29ad14172776a 880 Pfam PF13549 ATP-grasp domain 472 694 6.4E-73 T 18-10-2018 CH53_2760 03d95001dc989c7d97a29ad14172776a 880 Gene3D G3DSA:3.40.50.261 131 283 2.5E-47 T 18-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CH53_2760 03d95001dc989c7d97a29ad14172776a 880 Gene3D G3DSA:3.40.630.30 717 880 7.3E-41 T 18-10-2018 CH53_2760 03d95001dc989c7d97a29ad14172776a 880 SMART SM00881 9 104 1.8E-23 T 18-10-2018 IPR003781 CoA-binding GO:0048037 CH53_2760 03d95001dc989c7d97a29ad14172776a 880 Pfam PF13380 CoA binding domain 13 129 3.8E-21 T 18-10-2018 IPR003781 CoA-binding GO:0048037 CH53_2760 03d95001dc989c7d97a29ad14172776a 880 SUPERFAMILY SSF51735 2 136 7.38E-32 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2760 03d95001dc989c7d97a29ad14172776a 880 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 7.4E-45 T 18-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CH53_2760 03d95001dc989c7d97a29ad14172776a 880 SUPERFAMILY SSF52210 287 447 1.01E-37 T 18-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CH53_2760 03d95001dc989c7d97a29ad14172776a 880 Gene3D G3DSA:3.30.1490.20 499 576 1.1E-55 T 18-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CH53_470 59cfd0c848acdab6d8f00ce571fd224d 469 Pfam PF03553 Na+/H+ antiporter family 168 467 5.1E-43 T 18-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CH53_45 bf58d65ac1f0818df5b061ed40cb9cf9 214 Pfam PF00765 Autoinducer synthase 8 188 7.5E-83 T 18-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_45 bf58d65ac1f0818df5b061ed40cb9cf9 214 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 48 - T 18-10-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_45 bf58d65ac1f0818df5b061ed40cb9cf9 214 Gene3D G3DSA:3.40.630.30 1 211 8.3E-51 T 18-10-2018 CH53_45 bf58d65ac1f0818df5b061ed40cb9cf9 214 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 3.6E-61 T 18-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_45 bf58d65ac1f0818df5b061ed40cb9cf9 214 PRINTS PR01549 Autoinducer synthesis protein signature 163 180 3.6E-61 T 18-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_45 bf58d65ac1f0818df5b061ed40cb9cf9 214 PRINTS PR01549 Autoinducer synthesis protein signature 62 80 3.6E-61 T 18-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_45 bf58d65ac1f0818df5b061ed40cb9cf9 214 PRINTS PR01549 Autoinducer synthesis protein signature 141 162 3.6E-61 T 18-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_45 bf58d65ac1f0818df5b061ed40cb9cf9 214 PRINTS PR01549 Autoinducer synthesis protein signature 39 61 3.6E-61 T 18-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_45 bf58d65ac1f0818df5b061ed40cb9cf9 214 PRINTS PR01549 Autoinducer synthesis protein signature 119 140 3.6E-61 T 18-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_45 bf58d65ac1f0818df5b061ed40cb9cf9 214 PRINTS PR01549 Autoinducer synthesis protein signature 94 106 3.6E-61 T 18-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_45 bf58d65ac1f0818df5b061ed40cb9cf9 214 SUPERFAMILY SSF55729 1 208 1.27E-39 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_623 59f635ca6e12df284b04f9f60cda1bec 74 Pfam PF07191 zinc-ribbons 4 68 3.0E-27 T 18-10-2018 IPR010807 Protein of unknown function DUF1407 CH53_623 59f635ca6e12df284b04f9f60cda1bec 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 68 8.0E-29 T 18-10-2018 IPR010807 Protein of unknown function DUF1407 CH53_623 59f635ca6e12df284b04f9f60cda1bec 74 Gene3D G3DSA:2.10.290.10 1 71 7.2E-27 T 18-10-2018 IPR029037 YfgJ-like CH53_623 59f635ca6e12df284b04f9f60cda1bec 74 SUPERFAMILY SSF161187 1 70 7.06E-27 T 18-10-2018 CH53_1876 ded265eea5288084bc27d0e5639295c4 339 SUPERFAMILY SSF51735 8 182 3.35E-52 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1876 ded265eea5288084bc27d0e5639295c4 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 162 5.7E-50 T 18-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CH53_1876 ded265eea5288084bc27d0e5639295c4 339 PIRSF PIRSF000114 1 336 2.4E-100 T 18-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CH53_1876 ded265eea5288084bc27d0e5639295c4 339 Gene3D G3DSA:1.10.1040.10 193 338 3.4E-53 T 18-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CH53_1876 ded265eea5288084bc27d0e5639295c4 339 Gene3D G3DSA:3.40.50.720 2 191 7.2E-55 T 18-10-2018 CH53_1876 ded265eea5288084bc27d0e5639295c4 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 1.1E-41 T 18-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CH53_1876 ded265eea5288084bc27d0e5639295c4 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 1.1E-41 T 18-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CH53_1876 ded265eea5288084bc27d0e5639295c4 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 1.1E-41 T 18-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CH53_1876 ded265eea5288084bc27d0e5639295c4 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 1.1E-41 T 18-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CH53_1876 ded265eea5288084bc27d0e5639295c4 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 1.1E-41 T 18-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CH53_1876 ded265eea5288084bc27d0e5639295c4 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 1.1E-41 T 18-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CH53_1876 ded265eea5288084bc27d0e5639295c4 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 5.2E-53 T 18-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CH53_1876 ded265eea5288084bc27d0e5639295c4 339 SUPERFAMILY SSF48179 184 335 4.14E-58 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_1876 ded265eea5288084bc27d0e5639295c4 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.019 T 18-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CH53_1876 ded265eea5288084bc27d0e5639295c4 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 18-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 83.972 T 18-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 6.8E-26 T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 6.8E-26 T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 6.8E-26 T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 6.8E-26 T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 Gene3D G3DSA:3.40.50.1370 6 329 3.2E-140 T 18-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 8.3E-32 T 18-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 8.3E-32 T 18-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 8.3E-32 T 18-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 8.3E-32 T 18-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 8.3E-32 T 18-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 9.3E-55 T 18-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 Gene3D G3DSA:3.40.50.1370 150 319 3.2E-140 T 18-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 1.9E-48 T 18-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 8.4E-136 T 18-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 SUPERFAMILY SSF53671 2 333 5.24E-99 T 18-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CH53_1242 38cb42ed82a0033e43506f9128abeb7a 335 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 810 885 1.6E-32 T 18-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 Gene3D G3DSA:3.20.20.80 336 823 2.4E-167 T 18-10-2018 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 216 335 3.7E-16 T 18-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 Pfam PF03173 Putative carbohydrate binding domain 38 196 7.6E-69 T 18-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 SUPERFAMILY SSF49384 29 199 4.18E-68 T 18-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 SUPERFAMILY SSF51445 338 778 2.44E-139 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 SMART SM01081 36 197 8.5E-100 T 18-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 751 768 5.8E-43 T 18-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 361 382 5.8E-43 T 18-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 505 523 5.8E-43 T 18-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 733 749 5.8E-43 T 18-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 332 349 5.8E-43 T 18-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 298 318 5.8E-43 T 18-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 438 455 5.8E-43 T 18-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 532 545 5.8E-43 T 18-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 338 769 4.4E-111 T 18-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 SUPERFAMILY SSF81296 786 889 2.66E-39 T 18-10-2018 IPR014756 Immunoglobulin E-set CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 SUPERFAMILY SSF55545 206 337 4.45E-28 T 18-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 Gene3D G3DSA:2.60.40.10 824 889 7.3E-28 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 Gene3D G3DSA:2.60.40.290 28 169 1.3E-60 T 18-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 CH53_3102 b3b7bc6b0b2c5fcea9d204426a1e82c7 891 Gene3D G3DSA:3.30.379.10 209 335 4.9E-26 T 18-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 CH53_1067 c67f10c019959cd7256bf466cad649c6 273 SUPERFAMILY SSF55347 131 240 3.49E-37 T 18-10-2018 CH53_1067 c67f10c019959cd7256bf466cad649c6 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 2.6E-42 T 18-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CH53_1067 c67f10c019959cd7256bf466cad649c6 273 SUPERFAMILY SSF51735 4 272 2.55E-50 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1067 c67f10c019959cd7256bf466cad649c6 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 268 9.5E-104 T 18-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CH53_1067 c67f10c019959cd7256bf466cad649c6 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 1.2E-40 T 18-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CH53_1067 c67f10c019959cd7256bf466cad649c6 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 18-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CH53_1067 c67f10c019959cd7256bf466cad649c6 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 34.453 T 18-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CH53_1067 c67f10c019959cd7256bf466cad649c6 273 Gene3D G3DSA:3.30.360.10 131 238 5.7E-102 T 18-10-2018 CH53_1067 c67f10c019959cd7256bf466cad649c6 273 PIRSF PIRSF000161 4 272 1.0E-87 T 18-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CH53_1067 c67f10c019959cd7256bf466cad649c6 273 Gene3D G3DSA:3.40.50.720 7 268 5.7E-102 T 18-10-2018 CH53_2035 dedd7922bdaf5c5c209a8f050fa0e418 428 Pfam PF11862 Domain of unknown function (DUF3382) 5 103 4.5E-25 T 18-10-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CH53_2035 dedd7922bdaf5c5c209a8f050fa0e418 428 Pfam PF02653 Branched-chain amino acid transport system / permease component 113 398 1.3E-56 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_3750 60a71f5d435e64d58e35c4d3247dedec 239 Pfam PF00106 short chain dehydrogenase 3 191 1.8E-20 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3750 60a71f5d435e64d58e35c4d3247dedec 239 SUPERFAMILY SSF51735 3 227 6.22E-26 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3750 60a71f5d435e64d58e35c4d3247dedec 239 Gene3D G3DSA:3.40.50.720 2 227 2.0E-28 T 18-10-2018 CH53_1748 f2ced9d543c0f268f65ae13d293e265e 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 2.9E-26 T 18-10-2018 CH53_1748 f2ced9d543c0f268f65ae13d293e265e 222 Gene3D G3DSA:1.10.150.240 19 86 4.6E-46 T 18-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CH53_1748 f2ced9d543c0f268f65ae13d293e265e 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 183 4.5E-14 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1748 f2ced9d543c0f268f65ae13d293e265e 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 7.1E-5 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1748 f2ced9d543c0f268f65ae13d293e265e 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 7.1E-5 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1748 f2ced9d543c0f268f65ae13d293e265e 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 7.1E-5 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1748 f2ced9d543c0f268f65ae13d293e265e 222 SUPERFAMILY SSF56784 4 212 8.41E-47 T 18-10-2018 IPR036412 HAD-like superfamily CH53_1748 f2ced9d543c0f268f65ae13d293e265e 222 Gene3D G3DSA:3.40.50.1000 7 193 4.6E-46 T 18-10-2018 IPR023214 HAD superfamily CH53_1747 41b05a48a1fbfa4dae937e24568d2efb 251 SUPERFAMILY SSF161098 22 209 1.7E-40 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1747 41b05a48a1fbfa4dae937e24568d2efb 251 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 223 8.4E-20 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_1747 41b05a48a1fbfa4dae937e24568d2efb 251 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 116 6.8E-17 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CH53_1747 41b05a48a1fbfa4dae937e24568d2efb 251 Gene3D G3DSA:1.10.3720.10 22 225 3.7E-45 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1058 c14fef040b8a59b03739f95c61be59bd 272 Gene3D G3DSA:3.40.50.150 1 200 4.6E-67 T 18-10-2018 CH53_1058 c14fef040b8a59b03739f95c61be59bd 272 SMART SM00650 25 198 2.2E-82 T 18-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CH53_1058 c14fef040b8a59b03739f95c61be59bd 272 Gene3D G3DSA:1.10.8.100 201 268 1.7E-27 T 18-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 CH53_1058 c14fef040b8a59b03739f95c61be59bd 272 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 18-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CH53_1058 c14fef040b8a59b03739f95c61be59bd 272 SUPERFAMILY SSF53335 17 265 1.37E-77 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_1058 c14fef040b8a59b03739f95c61be59bd 272 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 1.1E-87 T 18-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CH53_1058 c14fef040b8a59b03739f95c61be59bd 272 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 55.861 T 18-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CH53_1058 c14fef040b8a59b03739f95c61be59bd 272 Pfam PF00398 Ribosomal RNA adenine dimethylase 11 264 3.4E-78 T 18-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CH53_1616 ba448e9b6b7554413db4f8a264f91d21 325 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 40 313 1.8E-122 T 18-10-2018 IPR005274 Inner membrane protein YhjD CH53_1616 ba448e9b6b7554413db4f8a264f91d21 325 Pfam PF03631 Virulence factor BrkB 53 311 3.5E-46 T 18-10-2018 IPR017039 Virulence factor BrkB CH53_1616 ba448e9b6b7554413db4f8a264f91d21 325 PIRSF PIRSF035875 24 318 2.2E-22 T 18-10-2018 IPR017039 Virulence factor BrkB CH53_3775 912438967075ca89bcdc7657e9d6dd9a 245 Pfam PF02811 PHP domain 5 80 7.3E-7 T 18-10-2018 IPR004013 PHP domain GO:0003824 CH53_3775 912438967075ca89bcdc7657e9d6dd9a 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 49.309 T 18-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 CH53_3775 912438967075ca89bcdc7657e9d6dd9a 245 Gene3D G3DSA:3.20.20.140 1 245 3.4E-65 T 18-10-2018 CH53_3775 912438967075ca89bcdc7657e9d6dd9a 245 SUPERFAMILY SSF89550 3 239 9.68E-63 T 18-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CH53_3775 912438967075ca89bcdc7657e9d6dd9a 245 SMART SM00481 4 78 2.3E-15 T 18-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CH53_2273 65efcba72863e14fd59a0eda06b8e064 241 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 10 232 39.699 T 18-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_2273 65efcba72863e14fd59a0eda06b8e064 241 Pfam PF00912 Transglycosylase 59 226 1.5E-50 T 18-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_2273 65efcba72863e14fd59a0eda06b8e064 241 SUPERFAMILY SSF53955 52 231 4.78E-61 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily CH53_2273 65efcba72863e14fd59a0eda06b8e064 241 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 18 230 1.8E-83 T 18-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_2273 65efcba72863e14fd59a0eda06b8e064 241 Gene3D G3DSA:1.10.3810.10 53 239 4.6E-53 T 18-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_2816 0eeb4a6a3930d9e6c46a5d29071ec651 95 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 94 24.214 T 18-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 CH53_2816 0eeb4a6a3930d9e6c46a5d29071ec651 95 SUPERFAMILY SSF51182 1 94 1.98E-30 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_2816 0eeb4a6a3930d9e6c46a5d29071ec651 95 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 3.1E-31 T 18-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 CH53_2816 0eeb4a6a3930d9e6c46a5d29071ec651 95 Gene3D G3DSA:2.60.120.10 1 94 3.8E-31 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_1856 f37eb1be8407dd697ded5c00fef2aa82 404 SUPERFAMILY SSF52507 3 177 4.84E-59 T 18-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CH53_1856 f37eb1be8407dd697ded5c00fef2aa82 404 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 369 9.6E-75 T 18-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CH53_1856 f37eb1be8407dd697ded5c00fef2aa82 404 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 5 395 9.1E-162 T 18-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 CH53_1856 f37eb1be8407dd697ded5c00fef2aa82 404 Pfam PF02441 Flavoprotein 7 175 4.4E-43 T 18-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CH53_1856 f37eb1be8407dd697ded5c00fef2aa82 404 SUPERFAMILY SSF102645 185 400 2.75E-79 T 18-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CH53_1856 f37eb1be8407dd697ded5c00fef2aa82 404 Gene3D G3DSA:3.40.50.10300 187 404 5.6E-87 T 18-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CH53_1856 f37eb1be8407dd697ded5c00fef2aa82 404 Gene3D G3DSA:3.40.50.1950 1 186 5.5E-54 T 18-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CH53_2526 524cea713057c40100a5a64e530d3fe0 497 Gene3D G3DSA:2.115.10.20 24 346 3.1E-41 T 18-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CH53_2526 524cea713057c40100a5a64e530d3fe0 497 Pfam PF16346 Domain of unknown function (DUF4975) 375 480 3.6E-8 T 18-10-2018 IPR032507 Domain of unknown function DUF4975 CH53_2526 524cea713057c40100a5a64e530d3fe0 497 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 51 315 1.7E-24 T 18-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal CH53_2526 524cea713057c40100a5a64e530d3fe0 497 SUPERFAMILY SSF75005 47 316 1.7E-50 T 18-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CH53_2526 524cea713057c40100a5a64e530d3fe0 497 SMART SM00640 50 462 6.3E-8 T 18-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 CH53_721 17cef7cdb087e77e3a8dd7f5158c721a 391 Pfam PF07885 Ion channel 141 218 1.5E-13 T 18-10-2018 IPR013099 Potassium channel domain CH53_721 17cef7cdb087e77e3a8dd7f5158c721a 391 SUPERFAMILY SSF81324 122 262 6.41E-19 T 18-10-2018 CH53_721 17cef7cdb087e77e3a8dd7f5158c721a 391 Gene3D G3DSA:3.40.50.720 238 385 5.5E-25 T 18-10-2018 CH53_721 17cef7cdb087e77e3a8dd7f5158c721a 391 PRINTS PR00169 Potassium channel signature 49 69 5.3E-5 T 18-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CH53_721 17cef7cdb087e77e3a8dd7f5158c721a 391 PRINTS PR00169 Potassium channel signature 195 221 5.3E-5 T 18-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CH53_721 17cef7cdb087e77e3a8dd7f5158c721a 391 PRINTS PR00169 Potassium channel signature 166 188 5.3E-5 T 18-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CH53_721 17cef7cdb087e77e3a8dd7f5158c721a 391 Gene3D G3DSA:1.10.287.70 136 228 2.5E-15 T 18-10-2018 CH53_721 17cef7cdb087e77e3a8dd7f5158c721a 391 Pfam PF02254 TrkA-N domain 243 356 4.6E-15 T 18-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CH53_721 17cef7cdb087e77e3a8dd7f5158c721a 391 SUPERFAMILY SSF51735 239 374 8.37E-19 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1781 d535d5bcfac5c9041aabef12ae2f2ad4 330 Gene3D G3DSA:3.30.930.10 1 330 3.9E-144 T 18-10-2018 CH53_1781 d535d5bcfac5c9041aabef12ae2f2ad4 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 1.1E-184 T 18-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CH53_1781 d535d5bcfac5c9041aabef12ae2f2ad4 330 PIRSF PIRSF001555 1 329 2.2E-155 T 18-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CH53_1781 d535d5bcfac5c9041aabef12ae2f2ad4 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 45.56 T 18-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CH53_1781 d535d5bcfac5c9041aabef12ae2f2ad4 330 SUPERFAMILY SSF55681 5 328 1.49E-97 T 18-10-2018 CH53_1781 d535d5bcfac5c9041aabef12ae2f2ad4 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 9.3E-95 T 18-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CH53_4087 46370993e669b09341c84ac76c81fcbe 674 Pfam PF04632 Fusaric acid resistance protein family 20 661 4.8E-187 T 18-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 CH53_3914 c8fe3cb7bfd855e900c4566e6b14940a 103 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 86 6.3E-20 T 18-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 CH53_3914 c8fe3cb7bfd855e900c4566e6b14940a 103 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 22.001 T 18-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 CH53_2032 a84d55e5eb873a2411c8240e3dcc4917 130 Pfam PF12568 Acetyltransferase (GNAT) domain 2 129 4.8E-53 T 18-10-2018 IPR000182 GNAT domain CH53_2032 a84d55e5eb873a2411c8240e3dcc4917 130 Gene3D G3DSA:3.40.630.30 1 130 1.5E-40 T 18-10-2018 CH53_2032 a84d55e5eb873a2411c8240e3dcc4917 130 SUPERFAMILY SSF55729 9 121 2.13E-10 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_2032 a84d55e5eb873a2411c8240e3dcc4917 130 Hamap MF_02018 PanD regulatory factor [panZ]. 1 130 33.617 T 18-10-2018 IPR032900 PanD regulatory factor PanZ GO:0015940|GO:0031638 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 18-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 TIGRFAM TIGR00016 ackA: acetate kinase 6 392 4.2E-152 T 18-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 SUPERFAMILY SSF53067 153 392 2.31E-83 T 18-10-2018 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 PIRSF PIRSF000722 3 397 2.4E-135 T 18-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 Gene3D G3DSA:3.30.420.40 4 190 1.6E-69 T 18-10-2018 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 Hamap MF_00020 Acetate kinase [ackA]. 1 397 161.686 T 18-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 Hamap MF_01881 Propionate kinase [tdcD]. 1 402 74.949 T 18-10-2018 IPR024917 Propionate kinase KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 18-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 Gene3D G3DSA:3.30.420.40 192 401 6.3E-78 T 18-10-2018 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 PRINTS PR00471 Acetate kinase family signature 7 18 6.4E-45 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 PRINTS PR00471 Acetate kinase family signature 374 386 6.4E-45 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 PRINTS PR00471 Acetate kinase family signature 169 182 6.4E-45 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 PRINTS PR00471 Acetate kinase family signature 318 334 6.4E-45 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 PRINTS PR00471 Acetate kinase family signature 199 220 6.4E-45 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 PRINTS PR00471 Acetate kinase family signature 296 309 6.4E-45 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 SUPERFAMILY SSF53067 6 190 4.19E-62 T 18-10-2018 CH53_1391 fd99309a27b34c545b9bf90f30bed259 406 Pfam PF00871 Acetokinase family 7 386 1.6E-145 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_758 e0a70581deb0a509e25d259f63805a88 393 SUPERFAMILY SSF56436 314 355 1.88E-5 T 18-10-2018 IPR016187 C-type lectin fold CH53_758 e0a70581deb0a509e25d259f63805a88 393 SUPERFAMILY SSF49373 189 267 2.2E-10 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_758 e0a70581deb0a509e25d259f63805a88 393 Gene3D G3DSA:3.10.100.10 280 389 9.7E-8 T 18-10-2018 IPR016186 C-type lectin-like/link domain superfamily CH53_758 e0a70581deb0a509e25d259f63805a88 393 Gene3D G3DSA:2.60.40.1080 185 278 2.8E-19 T 18-10-2018 CH53_900 fa4ba3d039620aca41ac1a33f106f895 248 Gene3D G3DSA:2.60.40.10 149 242 1.9E-22 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_900 fa4ba3d039620aca41ac1a33f106f895 248 PRINTS PR00969 Pili chaperone signature 26 35 1.2E-30 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_900 fa4ba3d039620aca41ac1a33f106f895 248 PRINTS PR00969 Pili chaperone signature 125 140 1.2E-30 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_900 fa4ba3d039620aca41ac1a33f106f895 248 PRINTS PR00969 Pili chaperone signature 72 93 1.2E-30 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_900 fa4ba3d039620aca41ac1a33f106f895 248 PRINTS PR00969 Pili chaperone signature 164 179 1.2E-30 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_900 fa4ba3d039620aca41ac1a33f106f895 248 PRINTS PR00969 Pili chaperone signature 102 119 1.2E-30 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_900 fa4ba3d039620aca41ac1a33f106f895 248 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 169 230 2.6E-16 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_900 fa4ba3d039620aca41ac1a33f106f895 248 SUPERFAMILY SSF49354 21 142 9.68E-36 T 18-10-2018 IPR008962 PapD-like superfamily CH53_900 fa4ba3d039620aca41ac1a33f106f895 248 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 101 118 - T 18-10-2018 IPR018046 Pili assembly chaperone, conserved site CH53_900 fa4ba3d039620aca41ac1a33f106f895 248 Gene3D G3DSA:2.60.40.10 25 143 1.5E-37 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_900 fa4ba3d039620aca41ac1a33f106f895 248 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 26 142 3.3E-35 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_900 fa4ba3d039620aca41ac1a33f106f895 248 SUPERFAMILY SSF49584 153 242 4.71E-24 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_2334 67046f14c25b0d960d9fda8f7562b2e6 435 SMART SM01118 2 202 2.7E-41 T 18-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CH53_2334 67046f14c25b0d960d9fda8f7562b2e6 435 Gene3D G3DSA:2.40.320.10 1 200 3.1E-38 T 18-10-2018 CH53_2334 67046f14c25b0d960d9fda8f7562b2e6 435 SUPERFAMILY SSF55154 1 218 1.23E-55 T 18-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 CH53_2334 67046f14c25b0d960d9fda8f7562b2e6 435 Pfam PF01928 CYTH domain 4 196 1.8E-31 T 18-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CH53_2493 65d1806815d4ace6d3fac4e1a816dbe4 404 PIRSF PIRSF029171 54 403 1.3E-34 T 18-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 CH53_2493 65d1806815d4ace6d3fac4e1a816dbe4 404 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 178 208 - T 18-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 CH53_2493 65d1806815d4ace6d3fac4e1a816dbe4 404 Pfam PF00326 Prolyl oligopeptidase family 139 215 9.9E-6 T 18-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CH53_2493 65d1806815d4ace6d3fac4e1a816dbe4 404 Gene3D G3DSA:3.40.50.1820 71 356 1.7E-48 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2493 65d1806815d4ace6d3fac4e1a816dbe4 404 SUPERFAMILY SSF53474 98 365 6.99E-20 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2493 65d1806815d4ace6d3fac4e1a816dbe4 404 Gene3D G3DSA:1.10.260.160 240 332 1.7E-48 T 18-10-2018 CH53_1720 0684326409f735404c02a5519a1b4a8a 240 SUPERFAMILY SSF46785 3 72 1.8E-17 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1720 0684326409f735404c02a5519a1b4a8a 240 SMART SM00345 6 65 3.4E-15 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1720 0684326409f735404c02a5519a1b4a8a 240 SUPERFAMILY SSF64288 53 232 1.73E-42 T 18-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CH53_1720 0684326409f735404c02a5519a1b4a8a 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 9.7E-8 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1720 0684326409f735404c02a5519a1b4a8a 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 9.7E-8 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1720 0684326409f735404c02a5519a1b4a8a 240 Pfam PF07702 UTRA domain 87 224 2.8E-30 T 18-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CH53_1720 0684326409f735404c02a5519a1b4a8a 240 Gene3D G3DSA:3.40.1410.10 73 229 3.5E-35 T 18-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CH53_1720 0684326409f735404c02a5519a1b4a8a 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 2.0E-16 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1720 0684326409f735404c02a5519a1b4a8a 240 Gene3D G3DSA:1.10.10.10 1 72 4.5E-19 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1720 0684326409f735404c02a5519a1b4a8a 240 SMART SM00866 86 225 2.2E-28 T 18-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 SUPERFAMILY SSF47226 764 909 9.29E-20 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 SMART SM00073 818 910 1.1E-5 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 Gene3D G3DSA:1.20.120.160 806 918 1.1E-26 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 SUPERFAMILY SSF52172 668 789 3.7E-32 T 18-10-2018 IPR011006 CheY-like superfamily CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 517 1.4E-28 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 Gene3D G3DSA:1.20.1480.50 165 254 1.2E-8 T 18-10-2018 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 Pfam PF00072 Response regulator receiver domain 670 781 5.5E-26 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 516 5.9E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 472 5.9E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 458 5.9E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 497 5.9E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 SUPERFAMILY SSF47384 277 357 4.71E-21 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 Gene3D G3DSA:1.10.287.130 255 354 4.9E-28 T 18-10-2018 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 176 1.5E-57 T 18-10-2018 IPR019247 Histidine kinase BarA, N-terminal CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 SUPERFAMILY SSF158472 199 248 1.57E-5 T 18-10-2018 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 Gene3D G3DSA:3.40.50.2300 655 790 1.0E-32 T 18-10-2018 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 SMART SM00448 668 781 4.5E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 Pfam PF00512 His Kinase A (phospho-acceptor) domain 292 355 9.3E-19 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 SUPERFAMILY SSF55874 345 517 6.02E-43 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 SMART SM00304 199 251 2.6E-7 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 Pfam PF01627 Hpt domain 829 908 2.1E-11 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 SUPERFAMILY SSF52172 534 646 4.82E-6 T 18-10-2018 IPR011006 CheY-like superfamily CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 SMART SM00387 403 519 5.8E-35 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 Gene3D G3DSA:3.30.565.10 357 523 4.9E-48 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_954 8f88686c76f89cad9d9af85e6aceff1f 920 SMART SM00388 291 356 8.3E-22 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_3175 0c95ab4cea8c52360d19c311a0e11dd2 491 Pfam PF00005 ABC transporter 24 163 2.0E-18 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3175 0c95ab4cea8c52360d19c311a0e11dd2 491 SUPERFAMILY SSF52540 24 225 6.5E-35 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3175 0c95ab4cea8c52360d19c311a0e11dd2 491 Pfam PF00005 ABC transporter 276 429 3.9E-25 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3175 0c95ab4cea8c52360d19c311a0e11dd2 491 SUPERFAMILY SSF52540 250 483 2.13E-40 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3175 0c95ab4cea8c52360d19c311a0e11dd2 491 Gene3D G3DSA:3.40.50.300 21 238 2.1E-35 T 18-10-2018 CH53_3175 0c95ab4cea8c52360d19c311a0e11dd2 491 SMART SM00382 285 480 3.7E-5 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3175 0c95ab4cea8c52360d19c311a0e11dd2 491 SMART SM00382 28 219 5.6E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3175 0c95ab4cea8c52360d19c311a0e11dd2 491 Gene3D G3DSA:3.40.50.300 244 489 1.6E-47 T 18-10-2018 CH53_4000 97b039f5fa5c7a2cb0b437c9df30ae99 280 Gene3D G3DSA:3.40.190.10 84 270 4.3E-34 T 18-10-2018 CH53_4000 97b039f5fa5c7a2cb0b437c9df30ae99 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 9.4E-8 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_4000 97b039f5fa5c7a2cb0b437c9df30ae99 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 29 9.4E-8 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_4000 97b039f5fa5c7a2cb0b437c9df30ae99 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 8 19 9.4E-8 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_4000 97b039f5fa5c7a2cb0b437c9df30ae99 280 SUPERFAMILY SSF46785 2 75 3.07E-16 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_4000 97b039f5fa5c7a2cb0b437c9df30ae99 280 Gene3D G3DSA:1.10.10.10 1 82 3.5E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4000 97b039f5fa5c7a2cb0b437c9df30ae99 280 Pfam PF03466 LysR substrate binding domain 79 258 4.7E-27 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_4000 97b039f5fa5c7a2cb0b437c9df30ae99 280 SUPERFAMILY SSF53850 78 277 4.89E-26 T 18-10-2018 CH53_4000 97b039f5fa5c7a2cb0b437c9df30ae99 280 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 52 1.5E-14 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_4000 97b039f5fa5c7a2cb0b437c9df30ae99 280 Gene3D G3DSA:3.40.190.10 151 250 4.3E-34 T 18-10-2018 CH53_3170 072291422782636eccab004239c1d0b4 354 Gene3D G3DSA:2.70.98.10 14 352 3.6E-117 T 18-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CH53_3170 072291422782636eccab004239c1d0b4 354 SUPERFAMILY SSF74650 15 351 4.52E-108 T 18-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CH53_3170 072291422782636eccab004239c1d0b4 354 PIRSF PIRSF005096 8 354 2.9E-121 T 18-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CH53_3170 072291422782636eccab004239c1d0b4 354 Pfam PF01263 Aldose 1-epimerase 25 350 5.8E-89 T 18-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CH53_3170 072291422782636eccab004239c1d0b4 354 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 19 351 1.9E-142 T 18-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CH53_3170 072291422782636eccab004239c1d0b4 354 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 178 187 - T 18-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CH53_62 0e9f3ac55702b9fa8e29a7d1bd8162d4 415 PIRSF PIRSF001235 1 411 1.2E-126 T 18-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 CH53_62 0e9f3ac55702b9fa8e29a7d1bd8162d4 415 TIGRFAM TIGR03176 AllC: allantoate amidohydrolase 2 408 5.5E-202 T 18-10-2018 IPR017591 Allantoate amidohydrolase GO:0000256|GO:0009442|GO:0030145|GO:0042803|GO:0047652 KEGG: 00230+3.5.3.9|MetaCyc: PWY-5698 CH53_62 0e9f3ac55702b9fa8e29a7d1bd8162d4 415 SUPERFAMILY SSF55031 211 327 4.54E-23 T 18-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CH53_62 0e9f3ac55702b9fa8e29a7d1bd8162d4 415 Gene3D G3DSA:3.30.70.360 211 325 5.8E-133 T 18-10-2018 CH53_62 0e9f3ac55702b9fa8e29a7d1bd8162d4 415 Pfam PF01546 Peptidase family M20/M25/M40 78 404 1.3E-28 T 18-10-2018 IPR002933 Peptidase M20 GO:0016787 CH53_62 0e9f3ac55702b9fa8e29a7d1bd8162d4 415 Gene3D G3DSA:3.40.630.10 18 399 5.8E-133 T 18-10-2018 CH53_62 0e9f3ac55702b9fa8e29a7d1bd8162d4 415 SUPERFAMILY SSF53187 6 407 4.0E-78 T 18-10-2018 CH53_62 0e9f3ac55702b9fa8e29a7d1bd8162d4 415 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 8 406 2.9E-156 T 18-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 CH53_4010 bf0651e912e0fc8312cfd2865be15f4d 786 Pfam PF15615 TerB-C domain 662 782 7.2E-10 T 18-10-2018 IPR028932 TerB-C domain CH53_4010 bf0651e912e0fc8312cfd2865be15f4d 786 Pfam PF13208 TerB N-terminal domain 119 321 2.5E-52 T 18-10-2018 IPR025266 TerB, N-terminal CH53_4010 bf0651e912e0fc8312cfd2865be15f4d 786 SUPERFAMILY SSF158682 525 648 3.66E-16 T 18-10-2018 IPR029024 TerB-like CH53_3684 57871efdaab01ac53c0e8b50b1fe55d4 1250 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 779 796 - T 18-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CH53_3684 57871efdaab01ac53c0e8b50b1fe55d4 1250 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 1.5E-15 T 18-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 CH53_3684 57871efdaab01ac53c0e8b50b1fe55d4 1250 SUPERFAMILY SSF53706 4 1072 0.0 T 18-10-2018 CH53_3684 57871efdaab01ac53c0e8b50b1fe55d4 1250 Gene3D G3DSA:3.40.50.12440 44 1247 0.0 T 18-10-2018 CH53_3684 57871efdaab01ac53c0e8b50b1fe55d4 1250 Pfam PF00384 Molybdopterin oxidoreductase 108 834 4.5E-178 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3684 57871efdaab01ac53c0e8b50b1fe55d4 1250 SUPERFAMILY SSF50692 1082 1239 4.52E-45 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CH53_3684 57871efdaab01ac53c0e8b50b1fe55d4 1250 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1237 0.0 T 18-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 CH53_3684 57871efdaab01ac53c0e8b50b1fe55d4 1250 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 18-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 CH53_3684 57871efdaab01ac53c0e8b50b1fe55d4 1250 SMART SM00926 43 105 4.1E-8 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3684 57871efdaab01ac53c0e8b50b1fe55d4 1250 Pfam PF01568 Molydopterin dinucleotide binding domain 1090 1204 1.2E-18 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CH53_3684 57871efdaab01ac53c0e8b50b1fe55d4 1250 Gene3D G3DSA:4.10.1200.10 1 28 6.0E-14 T 18-10-2018 CH53_2948 35948606e34001391db0fdc04ee98cea 465 Pfam PF01979 Amidohydrolase family 224 418 4.2E-24 T 18-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CH53_2948 35948606e34001391db0fdc04ee98cea 465 Gene3D G3DSA:2.30.40.10 26 424 2.2E-96 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_2948 35948606e34001391db0fdc04ee98cea 465 SUPERFAMILY SSF51556 72 370 1.28E-47 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_2948 35948606e34001391db0fdc04ee98cea 465 SUPERFAMILY SSF51338 19 443 1.05E-27 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_2948 35948606e34001391db0fdc04ee98cea 465 Gene3D G3DSA:3.20.20.140 74 428 2.2E-96 T 18-10-2018 CH53_1583 17444d91db00182d51fe224531beaf84 261 Gene3D G3DSA:3.30.1330.80 31 247 1.3E-81 T 18-10-2018 CH53_1583 17444d91db00182d51fe224531beaf84 261 PIRSF PIRSF001332 9 261 1.7E-97 T 18-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 CH53_1583 17444d91db00182d51fe224531beaf84 261 Pfam PF03306 Alpha-acetolactate decarboxylase 31 248 7.5E-86 T 18-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 CH53_1583 17444d91db00182d51fe224531beaf84 261 Gene3D G3DSA:3.30.1330.80 106 228 1.3E-81 T 18-10-2018 CH53_1583 17444d91db00182d51fe224531beaf84 261 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 30 259 2.1E-92 T 18-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 CH53_1583 17444d91db00182d51fe224531beaf84 261 SUPERFAMILY SSF117856 30 260 1.15E-85 T 18-10-2018 CH53_847 8a1f2759aff93fe464b32ec63e73f212 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 3.2E-45 T 18-10-2018 IPR001303 Class II aldolase/adducin N-terminal CH53_847 8a1f2759aff93fe464b32ec63e73f212 231 SMART SM01007 7 198 1.1E-64 T 18-10-2018 IPR001303 Class II aldolase/adducin N-terminal CH53_847 8a1f2759aff93fe464b32ec63e73f212 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 1.3E-127 T 18-10-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 CH53_847 8a1f2759aff93fe464b32ec63e73f212 231 SUPERFAMILY SSF53639 1 223 5.1E-69 T 18-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CH53_847 8a1f2759aff93fe464b32ec63e73f212 231 Gene3D G3DSA:3.40.225.10 1 231 8.9E-62 T 18-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CH53_2555 e8492a50f7284f541ee561b89296f7c6 1517 SUPERFAMILY SSF69279 6 192 3.49E-49 T 18-10-2018 CH53_2555 e8492a50f7284f541ee561b89296f7c6 1517 Pfam PF05954 Phage late control gene D protein (GPD) 18 334 3.1E-86 T 18-10-2018 CH53_2555 e8492a50f7284f541ee561b89296f7c6 1517 SUPERFAMILY SSF69255 370 458 9.15E-32 T 18-10-2018 CH53_2555 e8492a50f7284f541ee561b89296f7c6 1517 SUPERFAMILY SSF69279 199 370 3.4E-34 T 18-10-2018 CH53_2555 e8492a50f7284f541ee561b89296f7c6 1517 Gene3D G3DSA:2.30.110.50 5 336 7.4E-90 T 18-10-2018 CH53_2555 e8492a50f7284f541ee561b89296f7c6 1517 Gene3D G3DSA:3.55.50.10 106 196 7.4E-90 T 18-10-2018 CH53_2555 e8492a50f7284f541ee561b89296f7c6 1517 SUPERFAMILY SSF69349 448 660 1.1E-42 T 18-10-2018 CH53_2555 e8492a50f7284f541ee561b89296f7c6 1517 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 12 510 9.8E-118 T 18-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CH53_2555 e8492a50f7284f541ee561b89296f7c6 1517 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 6 527 3.1E-153 T 18-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CH53_2555 e8492a50f7284f541ee561b89296f7c6 1517 Gene3D G3DSA:3.30.1920.30 232 294 7.4E-90 T 18-10-2018 CH53_2555 e8492a50f7284f541ee561b89296f7c6 1517 Gene3D G3DSA:2.40.50.230 361 462 1.2E-41 T 18-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily CH53_3866 e76cb95233e4795e92f98921af6f0e1e 299 SUPERFAMILY SSF52151 1 293 5.76E-59 T 18-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CH53_3866 e76cb95233e4795e92f98921af6f0e1e 299 Pfam PF01734 Patatin-like phospholipase 8 167 9.7E-23 T 18-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CH53_3866 e76cb95233e4795e92f98921af6f0e1e 299 Gene3D G3DSA:3.40.1090.10 105 200 1.4E-14 T 18-10-2018 CH53_3866 e76cb95233e4795e92f98921af6f0e1e 299 Gene3D G3DSA:3.40.1090.10 1 104 1.8E-22 T 18-10-2018 CH53_3346 3f0c39ba6e0fc91e057a014adfc8e245 327 Gene3D G3DSA:3.40.50.2300 130 267 2.1E-90 T 18-10-2018 CH53_3346 3f0c39ba6e0fc91e057a014adfc8e245 327 Pfam PF13407 Periplasmic binding protein domain 37 288 2.4E-51 T 18-10-2018 IPR025997 Periplasmic binding protein CH53_3346 3f0c39ba6e0fc91e057a014adfc8e245 327 Gene3D G3DSA:3.40.50.2300 41 300 2.1E-90 T 18-10-2018 CH53_3346 3f0c39ba6e0fc91e057a014adfc8e245 327 SUPERFAMILY SSF53822 29 325 2.26E-63 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_3233 6522097ebe30351be76add2ee5a56648 304 Pfam PF03466 LysR substrate binding domain 89 294 1.4E-40 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_3233 6522097ebe30351be76add2ee5a56648 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.7E-5 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3233 6522097ebe30351be76add2ee5a56648 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.7E-5 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3233 6522097ebe30351be76add2ee5a56648 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.7E-5 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3233 6522097ebe30351be76add2ee5a56648 304 Gene3D G3DSA:3.40.190.10 164 265 2.5E-59 T 18-10-2018 CH53_3233 6522097ebe30351be76add2ee5a56648 304 SUPERFAMILY SSF53850 89 298 8.14E-42 T 18-10-2018 CH53_3233 6522097ebe30351be76add2ee5a56648 304 Gene3D G3DSA:1.10.10.10 2 90 1.3E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3233 6522097ebe30351be76add2ee5a56648 304 Gene3D G3DSA:3.40.190.10 91 291 2.5E-59 T 18-10-2018 CH53_3233 6522097ebe30351be76add2ee5a56648 304 SUPERFAMILY SSF46785 2 112 1.58E-20 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3233 6522097ebe30351be76add2ee5a56648 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.7E-19 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2904 3045951d0732c9ccbdcd5b37fd363f79 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 3.0E-75 T 18-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CH53_2904 3045951d0732c9ccbdcd5b37fd363f79 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.112 T 18-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CH53_2904 3045951d0732c9ccbdcd5b37fd363f79 214 SUPERFAMILY SSF52540 1 210 7.62E-44 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2904 3045951d0732c9ccbdcd5b37fd363f79 214 PRINTS PR00094 Adenylate kinase signature 81 97 4.3E-35 T 18-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CH53_2904 3045951d0732c9ccbdcd5b37fd363f79 214 PRINTS PR00094 Adenylate kinase signature 4 17 4.3E-35 T 18-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CH53_2904 3045951d0732c9ccbdcd5b37fd363f79 214 PRINTS PR00094 Adenylate kinase signature 173 187 4.3E-35 T 18-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CH53_2904 3045951d0732c9ccbdcd5b37fd363f79 214 PRINTS PR00094 Adenylate kinase signature 32 46 4.3E-35 T 18-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CH53_2904 3045951d0732c9ccbdcd5b37fd363f79 214 PRINTS PR00094 Adenylate kinase signature 156 171 4.3E-35 T 18-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CH53_2904 3045951d0732c9ccbdcd5b37fd363f79 214 Pfam PF00406 Adenylate kinase 5 185 6.6E-60 T 18-10-2018 CH53_2904 3045951d0732c9ccbdcd5b37fd363f79 214 Gene3D G3DSA:3.40.50.300 1 214 2.2E-79 T 18-10-2018 CH53_2904 3045951d0732c9ccbdcd5b37fd363f79 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 18-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CH53_2904 3045951d0732c9ccbdcd5b37fd363f79 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 3.6E-15 T 18-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CH53_3726 c012ef8a24ac15f708f445e53ac73a18 318 Gene3D G3DSA:3.40.190.10 92 292 9.9E-86 T 18-10-2018 CH53_3726 c012ef8a24ac15f708f445e53ac73a18 318 Gene3D G3DSA:3.40.190.10 167 267 9.9E-86 T 18-10-2018 CH53_3726 c012ef8a24ac15f708f445e53ac73a18 318 Pfam PF03466 LysR substrate binding domain 90 289 5.6E-41 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_3726 c012ef8a24ac15f708f445e53ac73a18 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.2E-12 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3726 c012ef8a24ac15f708f445e53ac73a18 318 Gene3D G3DSA:1.10.10.10 1 86 6.2E-17 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3726 c012ef8a24ac15f708f445e53ac73a18 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.0E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3726 c012ef8a24ac15f708f445e53ac73a18 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.0E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3726 c012ef8a24ac15f708f445e53ac73a18 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.0E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3726 c012ef8a24ac15f708f445e53ac73a18 318 SUPERFAMILY SSF53850 91 294 8.7E-41 T 18-10-2018 CH53_3726 c012ef8a24ac15f708f445e53ac73a18 318 SUPERFAMILY SSF46785 18 113 9.92E-14 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2792 3e885a30567e972cb1a6685ce242e1d3 407 Gene3D G3DSA:3.40.50.80 275 393 2.6E-34 T 18-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH53_2792 3e885a30567e972cb1a6685ce242e1d3 407 Pfam PF00970 Oxidoreductase FAD-binding domain 202 266 2.9E-9 T 18-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CH53_2792 3e885a30567e972cb1a6685ce242e1d3 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 5.1E-19 T 18-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CH53_2792 3e885a30567e972cb1a6685ce242e1d3 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 1.3E-235 T 18-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CH53_2792 3e885a30567e972cb1a6685ce242e1d3 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 63.148 T 18-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CH53_2792 3e885a30567e972cb1a6685ce242e1d3 407 Gene3D G3DSA:2.40.30.10 126 264 1.4E-49 T 18-10-2018 CH53_2792 3e885a30567e972cb1a6685ce242e1d3 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 9.9E-5 T 18-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CH53_2792 3e885a30567e972cb1a6685ce242e1d3 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 9.9E-5 T 18-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CH53_2792 3e885a30567e972cb1a6685ce242e1d3 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 9.9E-5 T 18-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CH53_2792 3e885a30567e972cb1a6685ce242e1d3 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 314 325 9.9E-5 T 18-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CH53_2792 3e885a30567e972cb1a6685ce242e1d3 407 Gene3D G3DSA:3.10.20.30 34 125 6.3E-30 T 18-10-2018 IPR012675 Beta-grasp domain superfamily CH53_2792 3e885a30567e972cb1a6685ce242e1d3 407 PIRSF PIRSF000044 1 407 1.5E-218 T 18-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CH53_2792 3e885a30567e972cb1a6685ce242e1d3 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 41 114 1.5E-10 T 18-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CH53_2792 3e885a30567e972cb1a6685ce242e1d3 407 SUPERFAMILY SSF63380 105 272 1.02E-34 T 18-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CH53_2792 3e885a30567e972cb1a6685ce242e1d3 407 SUPERFAMILY SSF52343 255 402 1.83E-38 T 18-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH53_2792 3e885a30567e972cb1a6685ce242e1d3 407 SUPERFAMILY SSF54292 35 124 2.16E-22 T 18-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CH53_3452 f04e8b13e9b1feae9c7af5689bee8bb9 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 485 9.7E-175 T 18-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CH53_3452 f04e8b13e9b1feae9c7af5689bee8bb9 487 PIRSF PIRSF002457 1 487 3.2E-157 T 18-10-2018 IPR030676 Citrate carrier CitT-related CH53_3452 f04e8b13e9b1feae9c7af5689bee8bb9 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 480 1.5E-163 T 18-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CH53_1460 46b3ee6b6b649642ac9128f0e3528a5f 141 Pfam PF13411 MerR HTH family regulatory protein 3 69 1.5E-21 T 18-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CH53_1460 46b3ee6b6b649642ac9128f0e3528a5f 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 8.5E-14 T 18-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CH53_1460 46b3ee6b6b649642ac9128f0e3528a5f 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 8.5E-14 T 18-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CH53_1460 46b3ee6b6b649642ac9128f0e3528a5f 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 8.5E-14 T 18-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CH53_1460 46b3ee6b6b649642ac9128f0e3528a5f 141 SMART SM00422 2 71 6.9E-32 T 18-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CH53_1460 46b3ee6b6b649642ac9128f0e3528a5f 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 18-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CH53_1460 46b3ee6b6b649642ac9128f0e3528a5f 141 Gene3D G3DSA:1.10.1660.10 1 129 8.5E-38 T 18-10-2018 CH53_1460 46b3ee6b6b649642ac9128f0e3528a5f 141 SUPERFAMILY SSF46955 2 121 3.26E-34 T 18-10-2018 IPR009061 Putative DNA-binding domain superfamily CH53_1460 46b3ee6b6b649642ac9128f0e3528a5f 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 4.6E-68 T 18-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 CH53_4233 20f0fb8277bfd575612bf2cfb65a7bde 268 Gene3D G3DSA:1.10.10.10 15 87 4.1E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4233 20f0fb8277bfd575612bf2cfb65a7bde 268 Pfam PF01614 Bacterial transcriptional regulator 136 261 3.2E-40 T 18-10-2018 IPR014757 Transcription regulator IclR, C-terminal CH53_4233 20f0fb8277bfd575612bf2cfb65a7bde 268 Pfam PF09339 IclR helix-turn-helix domain 18 68 1.2E-14 T 18-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CH53_4233 20f0fb8277bfd575612bf2cfb65a7bde 268 Gene3D G3DSA:3.30.450.40 88 267 8.4E-67 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_4233 20f0fb8277bfd575612bf2cfb65a7bde 268 SMART SM00346 16 106 7.0E-41 T 18-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CH53_4233 20f0fb8277bfd575612bf2cfb65a7bde 268 SUPERFAMILY SSF46785 17 90 1.03E-14 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_4233 20f0fb8277bfd575612bf2cfb65a7bde 268 SUPERFAMILY SSF55781 83 265 6.02E-46 T 18-10-2018 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 8.5E-21 T 18-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 Gene3D G3DSA:3.30.950.10 331 470 1.3E-46 T 18-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 2.5E-7 T 18-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 SUPERFAMILY SSF51735 2 113 1.97E-25 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 220 234 - T 18-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 SUPERFAMILY SSF53790 213 456 1.96E-81 T 18-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 SUPERFAMILY SSF75615 114 210 6.54E-28 T 18-10-2018 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 2.9E-78 T 18-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 18-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 52.601 T 18-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 426 3.7E-52 T 18-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 Gene3D G3DSA:3.40.50.720 1 112 1.5E-31 T 18-10-2018 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 Gene3D G3DSA:1.10.8.210 149 208 9.0E-16 T 18-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 Gene3D G3DSA:3.30.160.110 113 148 9.8E-19 T 18-10-2018 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 448 5.4E-94 T 18-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 Gene3D G3DSA:3.40.1010.10 213 330 4.6E-46 T 18-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 PIRSF PIRSF036426 1 465 6.2E-204 T 18-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_939 3b3a3bac4972435fde91c15407e18e3f 472 Pfam PF13241 Putative NAD(P)-binding 6 115 2.2E-28 T 18-10-2018 CH53_2835 01b8bca3223d0a97d594d43decc5a5b8 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 291 5.2E-89 T 18-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CH53_2835 01b8bca3223d0a97d594d43decc5a5b8 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 302 28.61 T 18-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CH53_2835 01b8bca3223d0a97d594d43decc5a5b8 322 Pfam PF02355 Protein export membrane protein 117 300 1.3E-71 T 18-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CH53_2835 01b8bca3223d0a97d594d43decc5a5b8 322 PRINTS PR01755 Bacterial translocase SecF protein signature 159 173 1.8E-33 T 18-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CH53_2835 01b8bca3223d0a97d594d43decc5a5b8 322 PRINTS PR01755 Bacterial translocase SecF protein signature 207 225 1.8E-33 T 18-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CH53_2835 01b8bca3223d0a97d594d43decc5a5b8 322 PRINTS PR01755 Bacterial translocase SecF protein signature 239 254 1.8E-33 T 18-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CH53_2835 01b8bca3223d0a97d594d43decc5a5b8 322 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.8E-33 T 18-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CH53_2835 01b8bca3223d0a97d594d43decc5a5b8 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 127 288 3.4E-56 T 18-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CH53_2835 01b8bca3223d0a97d594d43decc5a5b8 322 Pfam PF07549 SecD/SecF GG Motif 40 66 3.3E-11 T 18-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CH53_2835 01b8bca3223d0a97d594d43decc5a5b8 322 SUPERFAMILY SSF82866 79 302 4.71E-43 T 18-10-2018 CH53_2835 01b8bca3223d0a97d594d43decc5a5b8 322 Gene3D G3DSA:1.20.1640.10 110 313 3.8E-16 T 18-10-2018 CH53_4161 ff750e4ac6af15a241350e876d73d2ae 233 Gene3D G3DSA:3.90.1720.10 112 232 7.1E-14 T 18-10-2018 CH53_4161 ff750e4ac6af15a241350e876d73d2ae 233 SUPERFAMILY SSF102712 2 103 1.2E-22 T 18-10-2018 CH53_4161 ff750e4ac6af15a241350e876d73d2ae 233 SUPERFAMILY SSF54001 112 231 8.34E-18 T 18-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CH53_4161 ff750e4ac6af15a241350e876d73d2ae 233 Pfam PF00877 NlpC/P60 family 116 230 1.5E-22 T 18-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain CH53_4161 ff750e4ac6af15a241350e876d73d2ae 233 Pfam PF14464 Prokaryotic homologs of the JAB domain 5 99 2.0E-16 T 18-10-2018 IPR028090 JAB domain, prokaryotic CH53_4161 ff750e4ac6af15a241350e876d73d2ae 233 Gene3D G3DSA:3.40.140.10 1 111 2.0E-21 T 18-10-2018 CH53_4161 ff750e4ac6af15a241350e876d73d2ae 233 SMART SM00232 1 124 6.1E-21 T 18-10-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 CH53_168 65b981ee641732b11412da596afdd043 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_168 65b981ee641732b11412da596afdd043 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_168 65b981ee641732b11412da596afdd043 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_168 65b981ee641732b11412da596afdd043 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 6.7E-25 T 18-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CH53_168 65b981ee641732b11412da596afdd043 164 SUPERFAMILY SSF46785 12 70 2.81E-19 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_168 65b981ee641732b11412da596afdd043 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.8E-21 T 18-10-2018 CH53_168 65b981ee641732b11412da596afdd043 164 Gene3D G3DSA:1.10.10.10 1 63 1.2E-32 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_168 65b981ee641732b11412da596afdd043 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 18-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CH53_168 65b981ee641732b11412da596afdd043 164 SUPERFAMILY SSF54909 74 157 9.52E-22 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_168 65b981ee641732b11412da596afdd043 164 SMART SM00344 12 121 7.4E-55 T 18-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CH53_168 65b981ee641732b11412da596afdd043 164 Gene3D G3DSA:3.30.70.920 64 159 1.7E-24 T 18-10-2018 CH53_3146 a66e3ed58f530947afd48d3a67f707e1 632 SUPERFAMILY SSF56300 17 323 1.79E-76 T 18-10-2018 CH53_3146 a66e3ed58f530947afd48d3a67f707e1 632 Pfam PF00149 Calcineurin-like phosphoesterase 25 243 3.1E-14 T 18-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CH53_3146 a66e3ed58f530947afd48d3a67f707e1 632 Gene3D G3DSA:3.60.21.10 16 322 3.2E-77 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like CH53_3146 a66e3ed58f530947afd48d3a67f707e1 632 ProSitePatterns PS00786 5'-nucleotidase signature 2. 103 114 - T 18-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_3146 a66e3ed58f530947afd48d3a67f707e1 632 Pfam PF02872 5'-nucleotidase, C-terminal domain 338 488 1.7E-19 T 18-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_3146 a66e3ed58f530947afd48d3a67f707e1 632 SUPERFAMILY SSF55816 332 547 1.19E-23 T 18-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_3146 a66e3ed58f530947afd48d3a67f707e1 632 Gene3D G3DSA:3.90.780.10 327 539 1.4E-28 T 18-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_3146 a66e3ed58f530947afd48d3a67f707e1 632 PRINTS PR01607 Apyrase family signature 199 216 5.8E-11 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_3146 a66e3ed58f530947afd48d3a67f707e1 632 PRINTS PR01607 Apyrase family signature 253 273 5.8E-11 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_3146 a66e3ed58f530947afd48d3a67f707e1 632 PRINTS PR01607 Apyrase family signature 22 40 5.8E-11 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_3146 a66e3ed58f530947afd48d3a67f707e1 632 PRINTS PR01607 Apyrase family signature 226 249 5.8E-11 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_2529 ecb0e0273e24baee088124c5558a1aad 412 Pfam PF01306 LacY proton/sugar symporter 8 400 4.0E-125 T 18-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 CH53_2529 ecb0e0273e24baee088124c5558a1aad 412 SUPERFAMILY SSF103473 1 400 1.11E-40 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_2529 ecb0e0273e24baee088124c5558a1aad 412 PRINTS PR00174 LacY proton/sugar symporter family signature 341 361 3.7E-73 T 18-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 CH53_2529 ecb0e0273e24baee088124c5558a1aad 412 PRINTS PR00174 LacY proton/sugar symporter family signature 279 305 3.7E-73 T 18-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 CH53_2529 ecb0e0273e24baee088124c5558a1aad 412 PRINTS PR00174 LacY proton/sugar symporter family signature 210 238 3.7E-73 T 18-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 CH53_2529 ecb0e0273e24baee088124c5558a1aad 412 PRINTS PR00174 LacY proton/sugar symporter family signature 310 329 3.7E-73 T 18-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 CH53_2529 ecb0e0273e24baee088124c5558a1aad 412 PRINTS PR00174 LacY proton/sugar symporter family signature 255 276 3.7E-73 T 18-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 CH53_2529 ecb0e0273e24baee088124c5558a1aad 412 PRINTS PR00174 LacY proton/sugar symporter family signature 68 97 3.7E-73 T 18-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 CH53_2529 ecb0e0273e24baee088124c5558a1aad 412 PRINTS PR00174 LacY proton/sugar symporter family signature 102 124 3.7E-73 T 18-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 CH53_2529 ecb0e0273e24baee088124c5558a1aad 412 PRINTS PR00174 LacY proton/sugar symporter family signature 144 162 3.7E-73 T 18-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 CH53_2529 ecb0e0273e24baee088124c5558a1aad 412 Gene3D G3DSA:1.20.1250.20 199 398 2.0E-65 T 18-10-2018 CH53_2529 ecb0e0273e24baee088124c5558a1aad 412 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 9 395 6.0E-125 T 18-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 CH53_2529 ecb0e0273e24baee088124c5558a1aad 412 Gene3D G3DSA:1.20.1250.20 5 197 4.7E-35 T 18-10-2018 CH53_2400 0c7cb615633fd00c2d7e794ed7f0814e 526 Gene3D G3DSA:1.10.287.950 216 518 5.5E-93 T 18-10-2018 CH53_2400 0c7cb615633fd00c2d7e794ed7f0814e 526 SMART SM00283 269 516 2.9E-92 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_2400 0c7cb615633fd00c2d7e794ed7f0814e 526 SMART SM00304 216 268 6.5E-4 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_2400 0c7cb615633fd00c2d7e794ed7f0814e 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 4.0E-62 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_2400 0c7cb615633fd00c2d7e794ed7f0814e 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 4.0E-62 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_2400 0c7cb615633fd00c2d7e794ed7f0814e 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 4.0E-62 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_2400 0c7cb615633fd00c2d7e794ed7f0814e 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 4.0E-62 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_2400 0c7cb615633fd00c2d7e794ed7f0814e 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 4.0E-62 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_2400 0c7cb615633fd00c2d7e794ed7f0814e 526 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 484 1.3E-55 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_2400 0c7cb615633fd00c2d7e794ed7f0814e 526 SUPERFAMILY SSF47170 31 151 4.71E-5 T 18-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CH53_2400 0c7cb615633fd00c2d7e794ed7f0814e 526 Pfam PF02203 Tar ligand binding domain homologue 3 169 2.7E-15 T 18-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CH53_2400 0c7cb615633fd00c2d7e794ed7f0814e 526 SUPERFAMILY SSF58104 241 517 1.57E-73 T 18-10-2018 CH53_3151 27ae74ca38336f3c5cdb830ce4095dcc 133 PIRSF PIRSF003230 1 133 8.0E-47 T 18-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CH53_3151 27ae74ca38336f3c5cdb830ce4095dcc 133 Pfam PF03061 Thioesterase superfamily 20 103 6.5E-16 T 18-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CH53_3151 27ae74ca38336f3c5cdb830ce4095dcc 133 SUPERFAMILY SSF54637 4 132 2.05E-38 T 18-10-2018 IPR029069 HotDog domain superfamily CH53_3151 27ae74ca38336f3c5cdb830ce4095dcc 133 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 1.4E-50 T 18-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 CH53_3151 27ae74ca38336f3c5cdb830ce4095dcc 133 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 18-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 CH53_3151 27ae74ca38336f3c5cdb830ce4095dcc 133 Gene3D G3DSA:3.10.129.10 1 133 4.3E-41 T 18-10-2018 CH53_3151 27ae74ca38336f3c5cdb830ce4095dcc 133 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 2.3E-42 T 18-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CH53_794 fd3d1c390a2313160ad8892d75208448 857 Gene3D G3DSA:3.40.50.300 550 764 5.8E-92 T 18-10-2018 CH53_794 fd3d1c390a2313160ad8892d75208448 857 SUPERFAMILY SSF81923 4 156 1.18E-41 T 18-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CH53_794 fd3d1c390a2313160ad8892d75208448 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 1.8E-13 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CH53_794 fd3d1c390a2313160ad8892d75208448 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 18-10-2018 IPR028299 ClpA/B, conserved site 2 CH53_794 fd3d1c390a2313160ad8892d75208448 857 SUPERFAMILY SSF52540 159 545 1.19E-99 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_794 fd3d1c390a2313160ad8892d75208448 857 Gene3D G3DSA:3.40.50.300 348 544 9.0E-70 T 18-10-2018 CH53_794 fd3d1c390a2313160ad8892d75208448 857 Gene3D G3DSA:1.10.8.60 766 857 1.3E-25 T 18-10-2018 CH53_794 fd3d1c390a2313160ad8892d75208448 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 2.7E-57 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CH53_794 fd3d1c390a2313160ad8892d75208448 857 Gene3D G3DSA:3.40.50.300 158 347 2.8E-74 T 18-10-2018 CH53_794 fd3d1c390a2313160ad8892d75208448 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 8.0E-10 T 18-10-2018 IPR004176 Clp, N-terminal CH53_794 fd3d1c390a2313160ad8892d75208448 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 5.1E-15 T 18-10-2018 IPR004176 Clp, N-terminal CH53_794 fd3d1c390a2313160ad8892d75208448 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 18-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CH53_794 fd3d1c390a2313160ad8892d75208448 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_794 fd3d1c390a2313160ad8892d75208448 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_794 fd3d1c390a2313160ad8892d75208448 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_794 fd3d1c390a2313160ad8892d75208448 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_794 fd3d1c390a2313160ad8892d75208448 857 SMART SM01086 766 855 3.5E-36 T 18-10-2018 IPR019489 Clp ATPase, C-terminal CH53_794 fd3d1c390a2313160ad8892d75208448 857 SUPERFAMILY SSF52540 546 851 7.19E-86 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_794 fd3d1c390a2313160ad8892d75208448 857 Gene3D G3DSA:1.10.1780.10 1 148 2.1E-35 T 18-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CH53_794 fd3d1c390a2313160ad8892d75208448 857 SMART SM00382 198 344 1.2E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_794 fd3d1c390a2313160ad8892d75208448 857 SMART SM00382 597 739 4.8E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_794 fd3d1c390a2313160ad8892d75208448 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 18-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 CH53_794 fd3d1c390a2313160ad8892d75208448 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 842 2.0E-25 T 18-10-2018 IPR019489 Clp ATPase, C-terminal CH53_158 07b1b672c8277427d72913ff8e7d8645 345 Pfam PF00710 Asparaginase, N-terminal 25 215 3.2E-61 T 18-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CH53_158 07b1b672c8277427d72913ff8e7d8645 345 Gene3D G3DSA:3.40.50.40 232 345 3.8E-43 T 18-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 CH53_158 07b1b672c8277427d72913ff8e7d8645 345 PIRSF PIRSF500176 22 344 1.1E-80 T 18-10-2018 CH53_158 07b1b672c8277427d72913ff8e7d8645 345 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 18-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CH53_158 07b1b672c8277427d72913ff8e7d8645 345 SUPERFAMILY SSF53774 23 343 3.14E-105 T 18-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 CH53_158 07b1b672c8277427d72913ff8e7d8645 345 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 18-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CH53_158 07b1b672c8277427d72913ff8e7d8645 345 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 8 345 2.8E-153 T 18-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 CH53_158 07b1b672c8277427d72913ff8e7d8645 345 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 9.2E-23 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CH53_158 07b1b672c8277427d72913ff8e7d8645 345 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 9.2E-23 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CH53_158 07b1b672c8277427d72913ff8e7d8645 345 PRINTS PR00139 Asparaginase/glutaminase family signature 279 297 9.2E-23 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CH53_158 07b1b672c8277427d72913ff8e7d8645 345 Gene3D G3DSA:3.40.50.1170 23 231 1.0E-83 T 18-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 CH53_158 07b1b672c8277427d72913ff8e7d8645 345 PIRSF PIRSF001220 21 345 3.1E-93 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CH53_158 07b1b672c8277427d72913ff8e7d8645 345 SMART SM00870 25 339 1.8E-141 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CH53_2450 34932cadf5ba99056a2ee0502508e6a4 188 Gene3D G3DSA:2.60.40.1090 31 187 6.3E-14 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_2450 34932cadf5ba99056a2ee0502508e6a4 188 Pfam PF00419 Fimbrial protein 33 187 3.0E-7 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_2450 34932cadf5ba99056a2ee0502508e6a4 188 SUPERFAMILY SSF49401 31 187 6.39E-17 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_2934 ac52aac1d42e0f1b2c04a4ad94501ee9 461 SMART SM00840 341 402 1.0E-26 T 18-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CH53_2934 ac52aac1d42e0f1b2c04a4ad94501ee9 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 38.968 T 18-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CH53_2934 ac52aac1d42e0f1b2c04a4ad94501ee9 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 1.4E-140 T 18-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CH53_2934 ac52aac1d42e0f1b2c04a4ad94501ee9 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.3E-29 T 18-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CH53_2934 ac52aac1d42e0f1b2c04a4ad94501ee9 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 1.3E-29 T 18-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CH53_2934 ac52aac1d42e0f1b2c04a4ad94501ee9 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 1.3E-29 T 18-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CH53_2934 ac52aac1d42e0f1b2c04a4ad94501ee9 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.3E-29 T 18-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CH53_2934 ac52aac1d42e0f1b2c04a4ad94501ee9 461 SUPERFAMILY SSF52374 1 313 1.82E-100 T 18-10-2018 CH53_2934 ac52aac1d42e0f1b2c04a4ad94501ee9 461 Gene3D G3DSA:3.40.50.620 1 305 1.7E-132 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_2934 ac52aac1d42e0f1b2c04a4ad94501ee9 461 Gene3D G3DSA:1.20.120.640 306 461 1.8E-55 T 18-10-2018 CH53_2934 ac52aac1d42e0f1b2c04a4ad94501ee9 461 Pfam PF09190 DALR domain 341 402 8.0E-24 T 18-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CH53_2934 ac52aac1d42e0f1b2c04a4ad94501ee9 461 SUPERFAMILY SSF47323 316 460 1.31E-42 T 18-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_2934 ac52aac1d42e0f1b2c04a4ad94501ee9 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 5.9E-191 T 18-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CH53_2839 9e220039e13a44f9a12713e1270c5c04 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 32.011 T 18-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CH53_2839 9e220039e13a44f9a12713e1270c5c04 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 6.1E-56 T 18-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CH53_2839 9e220039e13a44f9a12713e1270c5c04 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 2.6E-59 T 18-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CH53_2839 9e220039e13a44f9a12713e1270c5c04 156 SUPERFAMILY SSF52121 3 154 4.84E-60 T 18-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CH53_2839 9e220039e13a44f9a12713e1270c5c04 156 Gene3D G3DSA:3.40.50.960 1 156 1.3E-63 T 18-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CH53_3529 0e4295e879e67912c67e51643731dca2 899 SUPERFAMILY SSF56784 529 682 5.9E-35 T 18-10-2018 IPR036412 HAD-like superfamily CH53_3529 0e4295e879e67912c67e51643731dca2 899 Pfam PF00702 haloacid dehalogenase-like hydrolase 365 653 3.0E-18 T 18-10-2018 CH53_3529 0e4295e879e67912c67e51643731dca2 899 SUPERFAMILY SSF81653 159 269 9.15E-25 T 18-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CH53_3529 0e4295e879e67912c67e51643731dca2 899 Pfam PF00690 Cation transporter/ATPase, N-terminus 24 90 4.8E-17 T 18-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CH53_3529 0e4295e879e67912c67e51643731dca2 899 Gene3D G3DSA:3.40.50.1000 366 378 9.9E-85 T 18-10-2018 IPR023214 HAD superfamily CH53_3529 0e4295e879e67912c67e51643731dca2 899 Gene3D G3DSA:2.70.150.10 40 272 9.9E-85 T 18-10-2018 CH53_3529 0e4295e879e67912c67e51643731dca2 899 SMART SM00831 22 95 1.3E-20 T 18-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CH53_3529 0e4295e879e67912c67e51643731dca2 899 Pfam PF00689 Cation transporting ATPase, C-terminus 722 890 3.3E-16 T 18-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CH53_3529 0e4295e879e67912c67e51643731dca2 899 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 371 377 - T 18-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CH53_3529 0e4295e879e67912c67e51643731dca2 899 Gene3D G3DSA:3.40.50.1000 548 677 9.4E-60 T 18-10-2018 IPR023214 HAD superfamily CH53_3529 0e4295e879e67912c67e51643731dca2 899 SUPERFAMILY SSF81665 24 896 4.45E-103 T 18-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CH53_3529 0e4295e879e67912c67e51643731dca2 899 SUPERFAMILY SSF81660 364 547 7.19E-35 T 18-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CH53_3529 0e4295e879e67912c67e51643731dca2 899 Pfam PF00122 E1-E2 ATPase 142 349 3.1E-40 T 18-10-2018 CH53_3529 0e4295e879e67912c67e51643731dca2 899 Gene3D G3DSA:1.20.1110.10 678 795 9.4E-60 T 18-10-2018 CH53_3529 0e4295e879e67912c67e51643731dca2 899 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 266 407 8.8E-20 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_3529 0e4295e879e67912c67e51643731dca2 899 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 613 728 5.9E-28 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_3529 0e4295e879e67912c67e51643731dca2 899 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 20 898 0.0 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_3529 0e4295e879e67912c67e51643731dca2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 747 760 2.3E-89 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_3529 0e4295e879e67912c67e51643731dca2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 299 318 2.3E-89 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_3529 0e4295e879e67912c67e51643731dca2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 697 712 2.3E-89 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_3529 0e4295e879e67912c67e51643731dca2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 802 823 2.3E-89 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_3529 0e4295e879e67912c67e51643731dca2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 852 873 2.3E-89 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_3529 0e4295e879e67912c67e51643731dca2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 282 298 2.3E-89 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_3529 0e4295e879e67912c67e51643731dca2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 767 783 2.3E-89 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_3529 0e4295e879e67912c67e51643731dca2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 403 416 2.3E-89 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_3529 0e4295e879e67912c67e51643731dca2 899 PRINTS PR01836 Magnesium-transporting ATPase signature 715 726 2.3E-89 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_3529 0e4295e879e67912c67e51643731dca2 899 Gene3D G3DSA:1.20.1110.10 73 365 9.9E-85 T 18-10-2018 CH53_3529 0e4295e879e67912c67e51643731dca2 899 Gene3D G3DSA:3.40.1110.10 433 547 9.4E-60 T 18-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 Gene3D G3DSA:3.40.50.2300 804 932 7.4E-40 T 18-10-2018 CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 SUPERFAMILY SSF52172 686 800 3.28E-38 T 18-10-2018 IPR011006 CheY-like superfamily CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 Gene3D G3DSA:3.30.565.10 514 676 4.6E-43 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 SMART SM00448 810 921 1.0E-38 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 Pfam PF00072 Response regulator receiver domain 812 921 1.0E-30 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 Gene3D G3DSA:1.10.287.130 425 511 1.7E-22 T 18-10-2018 CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 560 669 2.4E-26 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 649 7.4E-16 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 624 7.4E-16 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 668 7.4E-16 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 610 7.4E-16 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 694 783 1.6E-32 T 18-10-2018 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 Gene3D G3DSA:3.40.50.10970 692 803 7.0E-11 T 18-10-2018 IPR038388 RcsC, C-terminal domain superfamily CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 SUPERFAMILY SSF55874 502 673 8.25E-46 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 SMART SM00387 560 671 7.9E-35 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 SMART SM00388 448 513 1.9E-19 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 Pfam PF00512 His Kinase A (phospho-acceptor) domain 448 512 1.7E-15 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 SUPERFAMILY SSF47384 432 514 4.71E-19 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 SUPERFAMILY SSF52172 810 928 3.42E-39 T 18-10-2018 IPR011006 CheY-like superfamily CH53_338 59c350a17862d48d74ce1a8052b7e6ac 932 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 1 926 27.743 T 18-10-2018 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021 CH53_2100 33ce5f8457d109ea889b59853f317ab5 254 Pfam PF00899 ThiF family 9 249 2.2E-61 T 18-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CH53_2100 33ce5f8457d109ea889b59853f317ab5 254 Gene3D G3DSA:3.40.50.720 1 254 1.4E-93 T 18-10-2018 CH53_2100 33ce5f8457d109ea889b59853f317ab5 254 SUPERFAMILY SSF69572 2 252 3.92E-80 T 18-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CH53_4122 f03f1fdbc36b8bdeb28142135f6834b2 348 PIRSF PIRSF001361 1 348 6.3E-156 T 18-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CH53_4122 f03f1fdbc36b8bdeb28142135f6834b2 348 Pfam PF00793 DAHP synthetase I family 41 337 2.9E-101 T 18-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CH53_4122 f03f1fdbc36b8bdeb28142135f6834b2 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 3.8E-168 T 18-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CH53_4122 f03f1fdbc36b8bdeb28142135f6834b2 348 Gene3D G3DSA:3.20.20.70 1 348 2.1E-153 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_4122 f03f1fdbc36b8bdeb28142135f6834b2 348 SUPERFAMILY SSF51569 7 346 2.2E-130 T 18-10-2018 CH53_1485 51fd5793fba485017c2ba15f3a198df8 274 PIRSF PIRSF002158 12 274 2.7E-100 T 18-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1485 51fd5793fba485017c2ba15f3a198df8 274 Gene3D G3DSA:2.40.50.140 1 114 3.3E-51 T 18-10-2018 CH53_1485 51fd5793fba485017c2ba15f3a198df8 274 SMART SM01382 124 251 1.3E-89 T 18-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CH53_1485 51fd5793fba485017c2ba15f3a198df8 274 SUPERFAMILY SSF50249 2 125 1.41E-50 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_1485 51fd5793fba485017c2ba15f3a198df8 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 18-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1485 51fd5793fba485017c2ba15f3a198df8 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.9E-34 T 18-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1485 51fd5793fba485017c2ba15f3a198df8 274 Gene3D G3DSA:2.30.30.30 115 195 1.8E-33 T 18-10-2018 IPR014722 Ribosomal protein L2, domain 2 CH53_1485 51fd5793fba485017c2ba15f3a198df8 274 Gene3D G3DSA:4.10.950.10 196 273 5.2E-37 T 18-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1485 51fd5793fba485017c2ba15f3a198df8 274 SUPERFAMILY SSF50104 127 269 1.14E-59 T 18-10-2018 IPR008991 Translation protein SH3-like domain superfamily CH53_1485 51fd5793fba485017c2ba15f3a198df8 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 4.4E-132 T 18-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CH53_1485 51fd5793fba485017c2ba15f3a198df8 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 1.8E-55 T 18-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CH53_1485 51fd5793fba485017c2ba15f3a198df8 274 SMART SM01383 42 118 3.6E-48 T 18-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1485 51fd5793fba485017c2ba15f3a198df8 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.352 T 18-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CH53_697 986bbdda6d2f58e8aefcf2e60a92e354 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 512 3.3E-19 T 18-10-2018 IPR003395 RecF/RecN/SMC, N-terminal CH53_697 986bbdda6d2f58e8aefcf2e60a92e354 553 PIRSF PIRSF003128 1 553 6.7E-158 T 18-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CH53_697 986bbdda6d2f58e8aefcf2e60a92e354 553 Gene3D G3DSA:3.40.50.300 312 553 4.9E-50 T 18-10-2018 CH53_697 986bbdda6d2f58e8aefcf2e60a92e354 553 Gene3D G3DSA:3.40.50.300 1 229 1.2E-43 T 18-10-2018 CH53_697 986bbdda6d2f58e8aefcf2e60a92e354 553 SUPERFAMILY SSF52540 1 514 3.52E-64 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_697 986bbdda6d2f58e8aefcf2e60a92e354 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 1.3E-166 T 18-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CH53_2840 4c6deec9fc3b54890b9bfed79bf410a4 138 Gene3D G3DSA:1.10.940.10 1 138 9.3E-55 T 18-10-2018 IPR035926 NusB-like superfamily CH53_2840 4c6deec9fc3b54890b9bfed79bf410a4 138 SUPERFAMILY SSF48013 3 136 1.96E-44 T 18-10-2018 IPR035926 NusB-like superfamily CH53_2840 4c6deec9fc3b54890b9bfed79bf410a4 138 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 132 2.3E-47 T 18-10-2018 IPR011605 NusB antitermination factor GO:0006353 CH53_2840 4c6deec9fc3b54890b9bfed79bf410a4 138 Pfam PF01029 NusB family 7 131 3.4E-37 T 18-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CH53_2840 4c6deec9fc3b54890b9bfed79bf410a4 138 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 4 135 24.287 T 18-10-2018 IPR011605 NusB antitermination factor GO:0006353 CH53_1920 d00b73de8df1e01ab3f0677e7d3c7bc1 216 Gene3D G3DSA:3.30.1500.10 1 204 3.3E-55 T 18-10-2018 IPR036912 Haem-binding HasA superfamily CH53_1920 d00b73de8df1e01ab3f0677e7d3c7bc1 216 SUPERFAMILY SSF54621 2 190 1.05E-10 T 18-10-2018 IPR036912 Haem-binding HasA superfamily CH53_1920 d00b73de8df1e01ab3f0677e7d3c7bc1 216 Pfam PF06438 Heme-binding protein A (HasA) 1 215 5.8E-30 T 18-10-2018 IPR010495 Haem-binding HasA CH53_820 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Gene3D G3DSA:3.30.70.1680 1 61 1.3E-31 T 18-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 CH53_820 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 18-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 CH53_820 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 59 17.134 T 18-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CH53_820 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 18-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CH53_820 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 59 1.3E-31 T 18-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CH53_820 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Pfam PF02599 Global regulator protein family 1 52 2.5E-27 T 18-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CH53_3831 68f9ee7334e490dbe78ccf0716dff42e 522 Pfam PF17287 POTRA domain 123 171 1.7E-13 T 18-10-2018 IPR035251 ShlB, POTRA domain CH53_3831 68f9ee7334e490dbe78ccf0716dff42e 522 Gene3D G3DSA:3.10.20.310 31 119 7.6E-8 T 18-10-2018 CH53_3831 68f9ee7334e490dbe78ccf0716dff42e 522 Gene3D G3DSA:2.40.160.50 147 522 4.9E-62 T 18-10-2018 CH53_3831 68f9ee7334e490dbe78ccf0716dff42e 522 Pfam PF08479 POTRA domain, ShlB-type 47 119 2.2E-13 T 18-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type CH53_3831 68f9ee7334e490dbe78ccf0716dff42e 522 PIRSF PIRSF029745 15 522 8.3E-107 T 18-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 CH53_3831 68f9ee7334e490dbe78ccf0716dff42e 522 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 176 484 1.2E-79 T 18-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal CH53_695 31f70454f2ae566d69fb26cb2fdbe2a8 192 Gene3D G3DSA:2.30.22.10 133 189 1.7E-25 T 18-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CH53_695 31f70454f2ae566d69fb26cb2fdbe2a8 192 SUPERFAMILY SSF51064 135 190 3.79E-18 T 18-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CH53_695 31f70454f2ae566d69fb26cb2fdbe2a8 192 PRINTS PR00773 GrpE protein signature 168 187 1.8E-26 T 18-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CH53_695 31f70454f2ae566d69fb26cb2fdbe2a8 192 PRINTS PR00773 GrpE protein signature 86 101 1.8E-26 T 18-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CH53_695 31f70454f2ae566d69fb26cb2fdbe2a8 192 PRINTS PR00773 GrpE protein signature 141 156 1.8E-26 T 18-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CH53_695 31f70454f2ae566d69fb26cb2fdbe2a8 192 PRINTS PR00773 GrpE protein signature 58 74 1.8E-26 T 18-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CH53_695 31f70454f2ae566d69fb26cb2fdbe2a8 192 Gene3D G3DSA:3.90.20.20 30 132 2.7E-34 T 18-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CH53_695 31f70454f2ae566d69fb26cb2fdbe2a8 192 Pfam PF01025 GrpE 20 189 1.0E-47 T 18-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CH53_695 31f70454f2ae566d69fb26cb2fdbe2a8 192 ProSitePatterns PS01071 grpE protein signature. 144 187 - T 18-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CH53_695 31f70454f2ae566d69fb26cb2fdbe2a8 192 SUPERFAMILY SSF58014 43 133 1.83E-26 T 18-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CH53_695 31f70454f2ae566d69fb26cb2fdbe2a8 192 Hamap MF_01151 Protein GrpE [grpE]. 4 189 21.216 T 18-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CH53_4114 d4d5c6f785806119f21777a356a28cff 248 Gene3D G3DSA:3.40.50.300 1 248 1.3E-66 T 18-10-2018 CH53_4114 d4d5c6f785806119f21777a356a28cff 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 2.2E-112 T 18-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 CH53_4114 d4d5c6f785806119f21777a356a28cff 248 SUPERFAMILY SSF52540 2 231 8.87E-44 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4114 d4d5c6f785806119f21777a356a28cff 248 Pfam PF00005 ABC transporter 17 172 4.1E-21 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_4114 d4d5c6f785806119f21777a356a28cff 248 SMART SM00382 26 223 5.8E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_4114 d4d5c6f785806119f21777a356a28cff 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2193 b5d58cec748c6b184cc0a989435ef001 449 Gene3D G3DSA:3.30.1490.20 131 203 7.6E-158 T 18-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CH53_2193 b5d58cec748c6b184cc0a989435ef001 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CH53_2193 b5d58cec748c6b184cc0a989435ef001 449 SUPERFAMILY SSF52440 1 113 3.67E-46 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CH53_2193 b5d58cec748c6b184cc0a989435ef001 449 SUPERFAMILY SSF56059 83 347 2.69E-69 T 18-10-2018 CH53_2193 b5d58cec748c6b184cc0a989435ef001 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.3E-43 T 18-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CH53_2193 b5d58cec748c6b184cc0a989435ef001 449 Gene3D G3DSA:3.40.50.20 1 85 4.4E-34 T 18-10-2018 CH53_2193 b5d58cec748c6b184cc0a989435ef001 449 SUPERFAMILY SSF51246 331 444 1.31E-43 T 18-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CH53_2193 b5d58cec748c6b184cc0a989435ef001 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 5.0E-85 T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CH53_2193 b5d58cec748c6b184cc0a989435ef001 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 4.1E-250 T 18-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CH53_2193 b5d58cec748c6b184cc0a989435ef001 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.3E-38 T 18-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CH53_2193 b5d58cec748c6b184cc0a989435ef001 449 SMART SM00878 336 441 3.2E-65 T 18-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CH53_2193 b5d58cec748c6b184cc0a989435ef001 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CH53_2193 b5d58cec748c6b184cc0a989435ef001 449 Gene3D G3DSA:3.30.470.20 86 433 7.6E-158 T 18-10-2018 CH53_3281 1e732019943aa197a30d210c6f38861c 606 Gene3D G3DSA:1.10.645.20 218 574 2.1E-111 T 18-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3281 1e732019943aa197a30d210c6f38861c 606 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 510 574 1.4E-10 T 18-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3281 1e732019943aa197a30d210c6f38861c 606 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 332 502 1.1E-35 T 18-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3281 1e732019943aa197a30d210c6f38861c 606 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 62 190 6.7E-23 T 18-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3281 1e732019943aa197a30d210c6f38861c 606 Pfam PF00374 Nickel-dependent hydrogenase 255 323 2.7E-13 T 18-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CH53_3281 1e732019943aa197a30d210c6f38861c 606 SUPERFAMILY SSF56762 230 574 1.7E-107 T 18-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3281 1e732019943aa197a30d210c6f38861c 606 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 125 170 7.0E-14 T 18-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3281 1e732019943aa197a30d210c6f38861c 606 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 253 264 - T 18-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3281 1e732019943aa197a30d210c6f38861c 606 SUPERFAMILY SSF143243 36 231 5.1E-45 T 18-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3281 1e732019943aa197a30d210c6f38861c 606 Gene3D G3DSA:3.30.460.80 37 172 3.7E-10 T 18-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_4093 17a6c357f3ec5f2cb5a3639b1e5f7592 129 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 1 128 2.5E-63 T 18-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CH53_4093 17a6c357f3ec5f2cb5a3639b1e5f7592 129 Gene3D G3DSA:3.10.180.10 1 125 6.3E-46 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_4093 17a6c357f3ec5f2cb5a3639b1e5f7592 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 117 2.1E-24 T 18-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CH53_4093 17a6c357f3ec5f2cb5a3639b1e5f7592 129 SUPERFAMILY SSF54593 1 122 1.88E-32 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_2154 a788ea067edd46edd0cc500670f8ada6 343 Gene3D G3DSA:3.20.20.70 19 260 2.2E-73 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2154 a788ea067edd46edd0cc500670f8ada6 343 SUPERFAMILY SSF51395 21 333 4.07E-74 T 18-10-2018 CH53_2154 a788ea067edd46edd0cc500670f8ada6 343 PIRSF PIRSF006621 11 332 3.2E-71 T 18-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CH53_2154 a788ea067edd46edd0cc500670f8ada6 343 Pfam PF01207 Dihydrouridine synthase (Dus) 24 323 2.6E-94 T 18-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CH53_2154 a788ea067edd46edd0cc500670f8ada6 343 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 21 335 4.1E-162 T 18-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CH53_2154 a788ea067edd46edd0cc500670f8ada6 343 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 102 120 - T 18-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CH53_2154 a788ea067edd46edd0cc500670f8ada6 343 Gene3D G3DSA:1.20.120.1460 267 338 7.3E-22 T 18-10-2018 CH53_2154 a788ea067edd46edd0cc500670f8ada6 343 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 12 337 52.886 T 18-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CH53_215 5af7f6c26fb8de90968f20db73b67144 455 Gene3D G3DSA:3.30.1330.90 10 159 4.2E-49 T 18-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 CH53_215 5af7f6c26fb8de90968f20db73b67144 455 Pfam PF03315 Serine dehydratase beta chain 3 155 1.0E-53 T 18-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CH53_215 5af7f6c26fb8de90968f20db73b67144 455 Pfam PF03313 Serine dehydratase alpha chain 184 448 6.4E-94 T 18-10-2018 IPR005130 Serine dehydratase-like, alpha subunit CH53_215 5af7f6c26fb8de90968f20db73b67144 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 7.0E-219 T 18-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CH53_215 5af7f6c26fb8de90968f20db73b67144 455 SUPERFAMILY SSF143548 16 158 1.73E-44 T 18-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 SUPERFAMILY SSF53738 4 177 4.71E-40 T 18-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 Gene3D G3DSA:3.40.120.10 2 146 2.8E-51 T 18-10-2018 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 379 440 1.4E-6 T 18-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 171 190 3.9E-31 T 18-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 239 254 3.9E-31 T 18-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 3.9E-31 T 18-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 210 223 3.9E-31 T 18-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 18-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 Gene3D G3DSA:3.40.120.10 256 372 7.7E-36 T 18-10-2018 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 370 5.1E-24 T 18-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 SUPERFAMILY SSF55957 374 453 5.23E-14 T 18-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 SUPERFAMILY SSF53738 152 262 3.77E-28 T 18-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 Gene3D G3DSA:3.30.310.50 375 457 7.7E-24 T 18-10-2018 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 Gene3D G3DSA:3.40.120.10 173 255 6.0E-30 T 18-10-2018 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 133 2.1E-33 T 18-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 SUPERFAMILY SSF53738 264 367 7.46E-33 T 18-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3308 54cee0bfdaef7352f037549c053b12f9 457 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 259 3.0E-23 T 18-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_4341 7eae41b162bfcabf0943ab7043ffdb33 219 Gene3D G3DSA:3.30.420.10 3 173 2.5E-42 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CH53_4341 7eae41b162bfcabf0943ab7043ffdb33 219 SUPERFAMILY SSF53098 1 196 2.74E-30 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_4341 7eae41b162bfcabf0943ab7043ffdb33 219 Pfam PF00929 Exonuclease 5 148 3.4E-11 T 18-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CH53_4341 7eae41b162bfcabf0943ab7043ffdb33 219 SMART SM00479 2 157 1.1E-30 T 18-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CH53_3166 70639467e391c4b90e74fdd390d3d38c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 8.3E-12 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3166 70639467e391c4b90e74fdd390d3d38c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 8.3E-12 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3166 70639467e391c4b90e74fdd390d3d38c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 8.3E-12 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3166 70639467e391c4b90e74fdd390d3d38c 202 SUPERFAMILY SSF52172 1 127 3.42E-30 T 18-10-2018 IPR011006 CheY-like superfamily CH53_3166 70639467e391c4b90e74fdd390d3d38c 202 SUPERFAMILY SSF46894 132 200 4.08E-17 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_3166 70639467e391c4b90e74fdd390d3d38c 202 SMART SM00421 140 197 1.6E-18 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3166 70639467e391c4b90e74fdd390d3d38c 202 Pfam PF00072 Response regulator receiver domain 5 115 6.1E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3166 70639467e391c4b90e74fdd390d3d38c 202 Gene3D G3DSA:3.40.50.12740 3 200 9.0E-49 T 18-10-2018 CH53_3166 70639467e391c4b90e74fdd390d3d38c 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 196 2.9E-16 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3166 70639467e391c4b90e74fdd390d3d38c 202 SMART SM00448 2 115 2.3E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3166 70639467e391c4b90e74fdd390d3d38c 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_4371 3d281457d58f08cd1ccaf8b1bbf8647a 79 ProDom PD060536 YECJ YPO1738 1 79 3.0E-36 T 18-10-2018 IPR020262 Uncharacterised protein family YecJ CH53_4371 3d281457d58f08cd1ccaf8b1bbf8647a 79 Pfam PF10964 Protein of unknown function (DUF2766) 1 78 1.5E-47 T 18-10-2018 IPR020262 Uncharacterised protein family YecJ CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 SUPERFAMILY SSF52218 63 206 8.58E-43 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 Pfam PF00667 FAD binding domain 232 426 9.3E-28 T 18-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 Gene3D G3DSA:3.40.50.360 57 218 4.3E-46 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 SUPERFAMILY SSF52343 446 601 1.44E-51 T 18-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 Gene3D G3DSA:1.20.990.10 282 386 4.2E-76 T 18-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 Gene3D G3DSA:3.40.50.80 447 601 1.3E-58 T 18-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 601 1.4E-275 T 18-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 PIRSF PIRSF000207 1 601 3.0E-279 T 18-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 Pfam PF00175 Oxidoreductase NAD-binding domain 459 565 1.3E-19 T 18-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 SUPERFAMILY SSF63380 230 448 6.96E-65 T 18-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 601 52.039 T 18-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 PRINTS PR00369 Flavodoxin signature 145 155 2.9E-14 T 18-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 PRINTS PR00369 Flavodoxin signature 65 78 2.9E-14 T 18-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 PRINTS PR00369 Flavodoxin signature 113 124 2.9E-14 T 18-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 PRINTS PR00369 Flavodoxin signature 169 188 2.9E-14 T 18-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 Gene3D G3DSA:2.40.30.10 234 441 4.2E-76 T 18-10-2018 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 496 507 5.7E-28 T 18-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 483 492 5.7E-28 T 18-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 527 543 5.7E-28 T 18-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 421 430 5.7E-28 T 18-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 272 282 5.7E-28 T 18-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 550 558 5.7E-28 T 18-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 458 477 5.7E-28 T 18-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 395 5.7E-28 T 18-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CH53_945 cc35126e99fe42a2d8f5225960db8efd 601 Pfam PF00258 Flavodoxin 67 197 9.7E-32 T 18-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 Gene3D G3DSA:3.30.413.10 631 784 2.5E-30 T 18-10-2018 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 Gene3D G3DSA:1.10.10.1100 422 476 2.8E-12 T 18-10-2018 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 559 621 1.7E-11 T 18-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 4.7E-14 T 18-10-2018 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 4.7E-14 T 18-10-2018 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 4.7E-14 T 18-10-2018 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 4.7E-14 T 18-10-2018 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 PIRSF PIRSF037149 1 834 0.0 T 18-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 756 1.4E-14 T 18-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 Gene3D G3DSA:3.50.50.60 8 283 1.0E-82 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 4.2E-11 T 18-10-2018 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 4.2E-11 T 18-10-2018 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 4.2E-11 T 18-10-2018 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 4.2E-11 T 18-10-2018 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 PRINTS PR00397 Sirohaem Fe-binding site signature 678 696 1.0E-5 T 18-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 PRINTS PR00397 Sirohaem Fe-binding site signature 635 653 1.0E-5 T 18-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 18-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 SUPERFAMILY SSF51905 2 189 1.3E-38 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 SUPERFAMILY SSF55124 501 626 1.96E-31 T 18-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 SUPERFAMILY SSF56014 632 808 5.63E-45 T 18-10-2018 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 470 5.5E-15 T 18-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 678 694 - T 18-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 SUPERFAMILY SSF51905 144 311 4.78E-29 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 285 4.0E-52 T 18-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CH53_1533 bc523e4b81a5b4fbb5b6711871f06af0 848 Gene3D G3DSA:3.50.50.60 110 246 1.0E-82 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2743 763c987af47cb8457e300227444b1c52 182 SMART SM01322 1 176 2.3E-117 T 18-10-2018 IPR009822 YaeQ CH53_2743 763c987af47cb8457e300227444b1c52 182 SUPERFAMILY SSF52980 2 179 7.24E-71 T 18-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CH53_2743 763c987af47cb8457e300227444b1c52 182 Gene3D G3DSA:3.10.640.10 1 181 5.7E-75 T 18-10-2018 IPR038590 YaeQ superfamily CH53_2743 763c987af47cb8457e300227444b1c52 182 Pfam PF07152 YaeQ protein 1 173 5.6E-74 T 18-10-2018 IPR009822 YaeQ CH53_2743 763c987af47cb8457e300227444b1c52 182 PIRSF PIRSF011484 1 180 7.0E-68 T 18-10-2018 IPR009822 YaeQ CH53_669 c396ae8fb7bb0b2ba25be98fbe494f0c 486 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 267 4.9E-32 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_669 c396ae8fb7bb0b2ba25be98fbe494f0c 486 Pfam PF01464 Transglycosylase SLT domain 296 402 6.1E-24 T 18-10-2018 IPR008258 Transglycosylase SLT domain 1 CH53_669 c396ae8fb7bb0b2ba25be98fbe494f0c 486 Gene3D G3DSA:1.10.530.10 286 468 1.2E-33 T 18-10-2018 CH53_669 c396ae8fb7bb0b2ba25be98fbe494f0c 486 SUPERFAMILY SSF53955 290 450 1.63E-35 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily CH53_669 c396ae8fb7bb0b2ba25be98fbe494f0c 486 Gene3D G3DSA:3.40.190.10 38 263 1.5E-64 T 18-10-2018 CH53_669 c396ae8fb7bb0b2ba25be98fbe494f0c 486 Gene3D G3DSA:3.40.190.10 129 224 1.5E-64 T 18-10-2018 CH53_669 c396ae8fb7bb0b2ba25be98fbe494f0c 486 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 309 337 - T 18-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CH53_669 c396ae8fb7bb0b2ba25be98fbe494f0c 486 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 475 49.646 T 18-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 CH53_669 c396ae8fb7bb0b2ba25be98fbe494f0c 486 SMART SM00062 44 268 1.7E-36 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_669 c396ae8fb7bb0b2ba25be98fbe494f0c 486 SUPERFAMILY SSF53850 45 267 3.18E-40 T 18-10-2018 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 5.9E-131 T 18-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 SMART SM00322 230 293 17.0 T 18-10-2018 IPR004087 K Homology domain GO:0003676 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 SMART SM00322 301 358 0.21 T 18-10-2018 IPR004087 K Homology domain GO:0003676 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 Pfam PF08529 NusA N-terminal domain 4 123 4.9E-37 T 18-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 Pfam PF13184 NusA-like KH domain 230 297 8.1E-28 T 18-10-2018 IPR025249 KH domain, NusA-like GO:0003723 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.258 T 18-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 Gene3D G3DSA:2.40.50.140 135 198 1.7E-19 T 18-10-2018 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 SUPERFAMILY SSF54814 279 342 9.16E-15 T 18-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 Gene3D G3DSA:3.30.300.20 278 345 2.0E-23 T 18-10-2018 IPR015946 K homology domain-like, alpha/beta CH53_1280 2a3b9a497265e6289240f09501edfeae 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 441 489 4.2E-18 T 18-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CH53_1280 2a3b9a497265e6289240f09501edfeae 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 3.2E-21 T 18-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CH53_1280 2a3b9a497265e6289240f09501edfeae 495 SUPERFAMILY SSF47794 355 415 1.57E-16 T 18-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 SUPERFAMILY SSF54814 201 278 2.68E-29 T 18-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 Gene3D G3DSA:1.10.150.20 352 421 4.7E-31 T 18-10-2018 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 SUPERFAMILY SSF47794 429 492 1.88E-17 T 18-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 Gene3D G3DSA:1.10.150.20 431 490 2.2E-25 T 18-10-2018 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 Gene3D G3DSA:3.30.1480.10 1 129 3.4E-46 T 18-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 SMART SM00316 133 200 3.6E-8 T 18-10-2018 IPR022967 RNA-binding domain, S1 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 1.7E-9 T 18-10-2018 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 Gene3D G3DSA:3.30.300.20 199 277 5.1E-31 T 18-10-2018 IPR015946 K homology domain-like, alpha/beta CH53_1280 2a3b9a497265e6289240f09501edfeae 495 SUPERFAMILY SSF69705 1 126 1.22E-41 T 18-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 CH53_1280 2a3b9a497265e6289240f09501edfeae 495 SUPERFAMILY SSF50249 133 199 4.57E-17 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_2258 20e1066668385001f0817c4cf0bad927 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 417 5.8E-187 T 18-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_2258 20e1066668385001f0817c4cf0bad927 421 Gene3D G3DSA:3.65.10.10 7 415 1.7E-174 T 18-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CH53_2258 20e1066668385001f0817c4cf0bad927 421 SUPERFAMILY SSF55205 1 420 1.64E-147 T 18-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CH53_2258 20e1066668385001f0817c4cf0bad927 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 44.612 T 18-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_2258 20e1066668385001f0817c4cf0bad927 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 408 3.7E-127 T 18-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CH53_2258 20e1066668385001f0817c4cf0bad927 421 Gene3D G3DSA:3.65.10.10 21 230 1.7E-174 T 18-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CH53_1705 901b33657960bc76c0e417d258cbb4e9 688 Gene3D G3DSA:3.20.20.80 183 415 2.3E-49 T 18-10-2018 CH53_1705 901b33657960bc76c0e417d258cbb4e9 688 SUPERFAMILY SSF51445 181 653 4.56E-76 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_1705 901b33657960bc76c0e417d258cbb4e9 688 Pfam PF00128 Alpha amylase, catalytic domain 228 606 2.8E-39 T 18-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CH53_1705 901b33657960bc76c0e417d258cbb4e9 688 PIRSF PIRSF036917 1 686 0.0 T 18-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 CH53_1705 901b33657960bc76c0e417d258cbb4e9 688 SMART SM00642 195 647 1.2E-80 T 18-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CH53_1705 901b33657960bc76c0e417d258cbb4e9 688 Gene3D G3DSA:3.20.20.80 426 654 1.5E-33 T 18-10-2018 CH53_1756 43b5bc96e61af66087dd86628e65484d 346 SUPERFAMILY SSF53850 29 335 4.73E-95 T 18-10-2018 CH53_1756 43b5bc96e61af66087dd86628e65484d 346 Gene3D G3DSA:3.40.190.10 29 326 3.9E-128 T 18-10-2018 CH53_1756 43b5bc96e61af66087dd86628e65484d 346 Pfam PF12849 PBP superfamily domain 23 307 9.9E-61 T 18-10-2018 IPR024370 PBP domain CH53_1756 43b5bc96e61af66087dd86628e65484d 346 PIRSF PIRSF002756 1 338 1.9E-105 T 18-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CH53_1756 43b5bc96e61af66087dd86628e65484d 346 Gene3D G3DSA:3.40.190.10 103 278 3.9E-128 T 18-10-2018 CH53_1756 43b5bc96e61af66087dd86628e65484d 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 1.7E-127 T 18-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CH53_1855 2fc470a11fc4c3bb54f8612a4116dfdc 152 Pfam PF00692 dUTPase 17 150 9.9E-43 T 18-10-2018 IPR029054 dUTPase-like CH53_1855 2fc470a11fc4c3bb54f8612a4116dfdc 152 Gene3D G3DSA:2.70.40.10 1 151 1.5E-53 T 18-10-2018 IPR036157 dUTPase-like superfamily CH53_1855 2fc470a11fc4c3bb54f8612a4116dfdc 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 151 34.295 T 18-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 CH53_1855 2fc470a11fc4c3bb54f8612a4116dfdc 152 SUPERFAMILY SSF51283 1 151 1.05E-55 T 18-10-2018 IPR036157 dUTPase-like superfamily CH53_1855 2fc470a11fc4c3bb54f8612a4116dfdc 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 151 2.5E-49 T 18-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 CH53_2519 cc48aaeed8ce91caba7ab145013c9b9c 291 Gene3D G3DSA:3.40.50.11240 108 289 2.2E-68 T 18-10-2018 CH53_2519 cc48aaeed8ce91caba7ab145013c9b9c 291 Gene3D G3DSA:1.10.30.40 40 106 2.9E-31 T 18-10-2018 CH53_2519 cc48aaeed8ce91caba7ab145013c9b9c 291 PIRSF PIRSF018982 41 291 3.5E-100 T 18-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CH53_2519 cc48aaeed8ce91caba7ab145013c9b9c 291 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 62 289 4.5E-78 T 18-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CH53_2519 cc48aaeed8ce91caba7ab145013c9b9c 291 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 53 290 39.137 T 18-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CH53_4273 d9f57c34930b98f69492a74aeccfd62e 455 Gene3D G3DSA:1.20.1720.10 17 253 3.9E-44 T 18-10-2018 CH53_4273 d9f57c34930b98f69492a74aeccfd62e 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 7.7E-9 T 18-10-2018 CH53_4273 d9f57c34930b98f69492a74aeccfd62e 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 7.7E-9 T 18-10-2018 CH53_4273 d9f57c34930b98f69492a74aeccfd62e 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 7.7E-9 T 18-10-2018 CH53_4273 d9f57c34930b98f69492a74aeccfd62e 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 7.7E-9 T 18-10-2018 CH53_4273 d9f57c34930b98f69492a74aeccfd62e 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 7.7E-9 T 18-10-2018 CH53_4273 d9f57c34930b98f69492a74aeccfd62e 455 Gene3D G3DSA:1.20.1250.20 259 455 3.4E-20 T 18-10-2018 CH53_4273 d9f57c34930b98f69492a74aeccfd62e 455 Pfam PF07690 Major Facilitator Superfamily 21 412 1.3E-46 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_4273 d9f57c34930b98f69492a74aeccfd62e 455 SUPERFAMILY SSF103473 10 449 4.84E-62 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_1511 9f48fb3ed21ac8700a5e5a3d129b5f38 255 SUPERFAMILY SSF52540 1 213 8.52E-67 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1511 9f48fb3ed21ac8700a5e5a3d129b5f38 255 Gene3D G3DSA:3.40.50.300 1 233 2.9E-62 T 18-10-2018 CH53_1511 9f48fb3ed21ac8700a5e5a3d129b5f38 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1511 9f48fb3ed21ac8700a5e5a3d129b5f38 255 SMART SM00382 26 215 4.7E-18 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1511 9f48fb3ed21ac8700a5e5a3d129b5f38 255 Pfam PF00005 ABC transporter 17 156 1.6E-31 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2833 8d3a57550a378d67f379c7daf3f40e1c 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 2.1E-16 T 18-10-2018 IPR003849 Preprotein translocase YajC CH53_2833 8d3a57550a378d67f379c7daf3f40e1c 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 2.1E-16 T 18-10-2018 IPR003849 Preprotein translocase YajC CH53_2833 8d3a57550a378d67f379c7daf3f40e1c 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 102 8.5E-33 T 18-10-2018 IPR003849 Preprotein translocase YajC CH53_2833 8d3a57550a378d67f379c7daf3f40e1c 110 Pfam PF02699 Preprotein translocase subunit 24 99 3.5E-26 T 18-10-2018 IPR003849 Preprotein translocase YajC CH53_2833 8d3a57550a378d67f379c7daf3f40e1c 110 SMART SM01323 19 102 1.9E-37 T 18-10-2018 IPR003849 Preprotein translocase YajC CH53_1483 f8dac1c557d023b0b5dfdfbd193dce1b 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.807 T 18-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1483 f8dac1c557d023b0b5dfdfbd193dce1b 110 SUPERFAMILY SSF54843 1 109 1.57E-42 T 18-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 CH53_1483 f8dac1c557d023b0b5dfdfbd193dce1b 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.5E-50 T 18-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1483 f8dac1c557d023b0b5dfdfbd193dce1b 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 8.3E-38 T 18-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CH53_1483 f8dac1c557d023b0b5dfdfbd193dce1b 110 Gene3D G3DSA:3.90.470.10 1 110 2.4E-46 T 18-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 CH53_1483 f8dac1c557d023b0b5dfdfbd193dce1b 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 18-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_2956 7eea476ef8431373dfa031c14425eb87 134 SUPERFAMILY SSF54593 2 127 9.49E-21 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_2956 7eea476ef8431373dfa031c14425eb87 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 124 5.1E-10 T 18-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CH53_2956 7eea476ef8431373dfa031c14425eb87 134 Gene3D G3DSA:3.10.180.10 1 128 1.6E-30 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 Pfam PF07516 SecA Wing and Scaffold domain 617 830 2.2E-67 T 18-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 Gene3D G3DSA:3.90.1440.10 229 368 4.8E-175 T 18-10-2018 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 SUPERFAMILY SSF52540 5 415 2.1E-81 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 Pfam PF02810 SEC-C motif 884 901 1.8E-10 T 18-10-2018 IPR004027 SEC-C motif CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 Gene3D G3DSA:3.40.50.300 22 415 4.8E-175 T 18-10-2018 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 SUPERFAMILY SSF52540 416 618 4.68E-56 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 SMART SM00958 228 358 4.9E-84 T 18-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 SMART SM00957 6 402 0.0 T 18-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 Pfam PF01043 SecA preprotein cross-linking domain 232 358 3.9E-39 T 18-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.861 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 ProSitePatterns PS01312 SecA family signature. 500 515 - T 18-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 PRINTS PR00906 SecA protein signature 101 115 2.3E-73 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 PRINTS PR00906 SecA protein signature 63 87 2.3E-73 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 PRINTS PR00906 SecA protein signature 170 190 2.3E-73 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 PRINTS PR00906 SecA protein signature 339 361 2.3E-73 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 PRINTS PR00906 SecA protein signature 376 393 2.3E-73 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 PRINTS PR00906 SecA protein signature 117 127 2.3E-73 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 PRINTS PR00906 SecA protein signature 413 426 2.3E-73 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 Gene3D G3DSA:1.10.3060.10 621 833 2.7E-80 T 18-10-2018 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 Pfam PF07517 SecA DEAD-like domain 7 402 8.6E-131 T 18-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 SUPERFAMILY SSF81767 227 368 1.01E-44 T 18-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 SUPERFAMILY SSF81886 620 892 4.19E-83 T 18-10-2018 IPR036266 SecA, Wing/Scaffold superfamily CH53_1009 a50d7097459b2613ea4c3cff864f9b98 904 Gene3D G3DSA:3.40.50.300 417 620 1.8E-86 T 18-10-2018 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 SUPERFAMILY SSF81665 18 902 1.96E-119 T 18-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 498 516 1.6E-19 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 613 629 1.6E-19 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 641 657 1.6E-19 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 673 698 1.6E-19 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 Gene3D G3DSA:3.40.50.1000 336 686 1.3E-288 T 18-10-2018 IPR023214 HAD superfamily CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 Gene3D G3DSA:1.20.1110.10 69 896 1.3E-288 T 18-10-2018 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 Gene3D G3DSA:3.40.1110.10 349 547 1.3E-288 T 18-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 Pfam PF00702 haloacid dehalogenase-like hydrolase 335 655 2.5E-23 T 18-10-2018 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 SMART SM00831 18 91 4.1E-35 T 18-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 562 572 1.3E-40 T 18-10-2018 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 677 1.3E-40 T 18-10-2018 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 540 551 1.3E-40 T 18-10-2018 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 176 190 1.3E-40 T 18-10-2018 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 660 1.3E-40 T 18-10-2018 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 339 353 1.3E-40 T 18-10-2018 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 SUPERFAMILY SSF56784 337 744 1.02E-61 T 18-10-2018 IPR036412 HAD-like superfamily CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 Pfam PF00689 Cation transporting ATPase, C-terminus 726 897 5.2E-43 T 18-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 Pfam PF00690 Cation transporter/ATPase, N-terminus 19 85 2.0E-21 T 18-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 SUPERFAMILY SSF81653 128 238 1.26E-29 T 18-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 Pfam PF00122 E1-E2 ATPase 126 319 2.2E-53 T 18-10-2018 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 98 204 1.1E-19 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 610 730 5.6E-35 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 231 360 2.1E-23 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 Gene3D G3DSA:2.70.150.10 33 241 1.3E-288 T 18-10-2018 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 SUPERFAMILY SSF81660 346 544 5.56E-45 T 18-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CH53_1095 b09db78d18aa4c4b89e3187e510eb7f4 908 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 341 347 - T 18-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CH53_3180 5e118e83e77540e0ec8dcda8b10280b1 354 Gene3D G3DSA:2.40.50.100 289 350 1.6E-14 T 18-10-2018 CH53_3180 5e118e83e77540e0ec8dcda8b10280b1 354 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 289 349 5.8E-16 T 18-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 CH53_3180 5e118e83e77540e0ec8dcda8b10280b1 354 Gene3D G3DSA:3.40.50.300 7 229 4.5E-54 T 18-10-2018 CH53_3180 5e118e83e77540e0ec8dcda8b10280b1 354 Pfam PF00005 ABC transporter 17 156 1.4E-28 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3180 5e118e83e77540e0ec8dcda8b10280b1 354 SUPERFAMILY SSF50331 235 350 4.68E-23 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CH53_3180 5e118e83e77540e0ec8dcda8b10280b1 354 Pfam PF03459 TOBE domain 290 349 8.7E-17 T 18-10-2018 IPR005116 Transport-associated OB, type 1 CH53_3180 5e118e83e77540e0ec8dcda8b10280b1 354 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3180 5e118e83e77540e0ec8dcda8b10280b1 354 SUPERFAMILY SSF52540 10 221 1.01E-58 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3180 5e118e83e77540e0ec8dcda8b10280b1 354 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 8.3E-151 T 18-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 CH53_3180 5e118e83e77540e0ec8dcda8b10280b1 354 SMART SM00382 23 206 2.1E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1895 c82d0d63ae3be9816c3c460d65ea506c 507 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 368 388 - T 18-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_1895 c82d0d63ae3be9816c3c460d65ea506c 507 PIRSF PIRSF000538 9 507 1.5E-180 T 18-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_1895 c82d0d63ae3be9816c3c460d65ea506c 507 Hamap MF_00186 Glycerol kinase [glpK]. 9 503 60.029 T 18-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CH53_1895 c82d0d63ae3be9816c3c460d65ea506c 507 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 267 456 8.8E-63 T 18-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CH53_1895 c82d0d63ae3be9816c3c460d65ea506c 507 SUPERFAMILY SSF53067 261 503 1.59E-86 T 18-10-2018 CH53_1895 c82d0d63ae3be9816c3c460d65ea506c 507 Gene3D G3DSA:3.30.420.40 260 506 6.3E-96 T 18-10-2018 CH53_1895 c82d0d63ae3be9816c3c460d65ea506c 507 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 11 258 1.8E-92 T 18-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CH53_1895 c82d0d63ae3be9816c3c460d65ea506c 507 SUPERFAMILY SSF53067 10 261 2.71E-96 T 18-10-2018 CH53_1895 c82d0d63ae3be9816c3c460d65ea506c 507 Gene3D G3DSA:3.30.420.40 7 259 1.8E-116 T 18-10-2018 CH53_1895 c82d0d63ae3be9816c3c460d65ea506c 507 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 10 502 6.1E-230 T 18-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CH53_1895 c82d0d63ae3be9816c3c460d65ea506c 507 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 141 153 - T 18-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_3568 f02ee7fbae0530c289a86abe7992f92b 156 Pfam PF03748 Flagellar basal body-associated protein FliL 54 154 2.0E-21 T 18-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CH53_4109 0869f91afc82594772feab3d7d775fba 78 SUPERFAMILY SSF58042 24 73 7.72E-23 T 18-10-2018 CH53_4109 0869f91afc82594772feab3d7d775fba 78 Gene3D G3DSA:1.20.5.190 22 77 2.9E-32 T 18-10-2018 CH53_4109 0869f91afc82594772feab3d7d775fba 78 PIRSF PIRSF002855 1 78 1.0E-28 T 18-10-2018 IPR016367 Murein-lipoprotein CH53_4109 0869f91afc82594772feab3d7d775fba 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 5.4E-25 T 18-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 CH53_3207 16905e2f950835de8a51cc2c4e25a61f 311 SUPERFAMILY SSF56601 4 281 3.17E-61 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CH53_3207 16905e2f950835de8a51cc2c4e25a61f 311 Gene3D G3DSA:3.40.710.10 24 308 8.8E-64 T 18-10-2018 CH53_3207 16905e2f950835de8a51cc2c4e25a61f 311 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 37 265 7.6E-81 T 18-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CH53_3207 16905e2f950835de8a51cc2c4e25a61f 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 9.7E-14 T 18-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CH53_3207 16905e2f950835de8a51cc2c4e25a61f 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 120 137 9.7E-14 T 18-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CH53_3207 16905e2f950835de8a51cc2c4e25a61f 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 147 160 9.7E-14 T 18-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CH53_2228 95d975c4f21bd0df3985518b75cebc16 101 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 81 2.4E-29 T 18-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 CH53_2228 95d975c4f21bd0df3985518b75cebc16 101 Pfam PF01381 Helix-turn-helix 22 65 2.4E-7 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_2228 95d975c4f21bd0df3985518b75cebc16 101 SMART SM00530 12 67 4.1E-4 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_2228 95d975c4f21bd0df3985518b75cebc16 101 SUPERFAMILY SSF47413 8 86 5.16E-23 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_2228 95d975c4f21bd0df3985518b75cebc16 101 Gene3D G3DSA:1.10.260.40 1 82 1.2E-27 T 18-10-2018 CH53_2591 59c522b510c15cda6bb9f6c33a4e150c 140 Gene3D G3DSA:3.30.420.140 2 139 1.2E-46 T 18-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 CH53_2591 59c522b510c15cda6bb9f6c33a4e150c 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 8 136 5.5E-58 T 18-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CH53_2591 59c522b510c15cda6bb9f6c33a4e150c 140 Pfam PF03652 Holliday junction resolvase 5 137 5.1E-43 T 18-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CH53_2591 59c522b510c15cda6bb9f6c33a4e150c 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 26.128 T 18-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CH53_2591 59c522b510c15cda6bb9f6c33a4e150c 140 SUPERFAMILY SSF53098 4 137 8.8E-43 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_2591 59c522b510c15cda6bb9f6c33a4e150c 140 SMART SM00732 4 104 1.2E-42 T 18-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CH53_171 1176ccca357ed757fde0606227bf7235 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 8.3E-202 T 18-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 CH53_171 1176ccca357ed757fde0606227bf7235 588 SMART SM00382 375 560 8.2E-15 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_171 1176ccca357ed757fde0606227bf7235 588 SUPERFAMILY SSF52540 362 582 6.9E-62 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_171 1176ccca357ed757fde0606227bf7235 588 Pfam PF00005 ABC transporter 369 514 4.1E-27 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_171 1176ccca357ed757fde0606227bf7235 588 Gene3D G3DSA:1.20.1560.10 2 334 4.0E-49 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_171 1176ccca357ed757fde0606227bf7235 588 Gene3D G3DSA:3.40.50.300 344 588 1.0E-67 T 18-10-2018 CH53_171 1176ccca357ed757fde0606227bf7235 588 Pfam PF00664 ABC transporter transmembrane region 26 291 3.1E-40 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CH53_171 1176ccca357ed757fde0606227bf7235 588 SUPERFAMILY SSF90123 11 329 9.16E-54 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_171 1176ccca357ed757fde0606227bf7235 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3301 ec18278569b36049a28afbabe4e63f18 370 Gene3D G3DSA:3.40.50.300 95 349 1.4E-80 T 18-10-2018 CH53_3301 ec18278569b36049a28afbabe4e63f18 370 ProSitePatterns PS01215 Mrp family signature. 214 230 - T 18-10-2018 IPR000808 Mrp, conserved site GO:0005524 CH53_3301 ec18278569b36049a28afbabe4e63f18 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 107 350 6.1E-100 T 18-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CH53_3301 ec18278569b36049a28afbabe4e63f18 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 102 351 36.983 T 18-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein CH53_3301 ec18278569b36049a28afbabe4e63f18 370 SUPERFAMILY SSF52540 109 356 5.23E-57 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_439 b049fdeeeaa2f1f4bba381acabbda812 436 PIRSF PIRSF000429 9 436 3.4E-123 T 18-10-2018 IPR002155 Thiolase GO:0016747 CH53_439 b049fdeeeaa2f1f4bba381acabbda812 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 18-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CH53_439 b049fdeeeaa2f1f4bba381acabbda812 436 Pfam PF00108 Thiolase, N-terminal domain 15 287 2.6E-62 T 18-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CH53_439 b049fdeeeaa2f1f4bba381acabbda812 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 70.128 T 18-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CH53_439 b049fdeeeaa2f1f4bba381acabbda812 436 SUPERFAMILY SSF53901 15 295 4.17E-64 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_439 b049fdeeeaa2f1f4bba381acabbda812 436 Gene3D G3DSA:3.40.47.10 8 435 4.8E-115 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_439 b049fdeeeaa2f1f4bba381acabbda812 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 1.2E-36 T 18-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CH53_439 b049fdeeeaa2f1f4bba381acabbda812 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 18-10-2018 IPR020610 Thiolase, active site GO:0016747 CH53_439 b049fdeeeaa2f1f4bba381acabbda812 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 18-10-2018 IPR020613 Thiolase, conserved site GO:0016747 CH53_439 b049fdeeeaa2f1f4bba381acabbda812 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 5.6E-254 T 18-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CH53_439 b049fdeeeaa2f1f4bba381acabbda812 436 SUPERFAMILY SSF53901 297 435 4.41E-32 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_439 b049fdeeeaa2f1f4bba381acabbda812 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 3.1E-132 T 18-10-2018 IPR002155 Thiolase GO:0016747 CH53_3640 dc767d788ad33c28ca9add0205a8c6e1 292 SUPERFAMILY SSF53474 6 264 7.71E-40 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_3640 dc767d788ad33c28ca9add0205a8c6e1 292 Gene3D G3DSA:3.40.50.1820 5 292 8.8E-82 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_3640 dc767d788ad33c28ca9add0205a8c6e1 292 Pfam PF00561 alpha/beta hydrolase fold 8 177 2.4E-14 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_3852 fb14e0b1a122d07d77c1764d1d4032fd 616 Gene3D G3DSA:3.90.226.10 317 539 6.9E-165 T 18-10-2018 CH53_3852 fb14e0b1a122d07d77c1764d1d4032fd 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 326 539 1.8E-51 T 18-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 CH53_3852 fb14e0b1a122d07d77c1764d1d4032fd 616 Gene3D G3DSA:3.90.226.10 95 316 6.9E-165 T 18-10-2018 CH53_3852 fb14e0b1a122d07d77c1764d1d4032fd 616 SUPERFAMILY SSF52096 34 286 1.62E-27 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CH53_3852 fb14e0b1a122d07d77c1764d1d4032fd 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 607 3.4E-225 T 18-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CH53_3852 fb14e0b1a122d07d77c1764d1d4032fd 616 Gene3D G3DSA:3.40.1750.10 187 496 6.9E-165 T 18-10-2018 CH53_3852 fb14e0b1a122d07d77c1764d1d4032fd 616 SUPERFAMILY SSF52096 314 528 9.95E-42 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CH53_3852 fb14e0b1a122d07d77c1764d1d4032fd 616 PIRSF PIRSF001217 8 616 3.7E-218 T 18-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CH53_3852 fb14e0b1a122d07d77c1764d1d4032fd 616 Pfam PF01343 Peptidase family S49 390 541 1.3E-47 T 18-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CH53_3852 fb14e0b1a122d07d77c1764d1d4032fd 616 Pfam PF01343 Peptidase family S49 139 287 3.3E-37 T 18-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CH53_2730 c346b6bf8969c324cbe9d409e30a1605 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.12 T 18-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CH53_2730 c346b6bf8969c324cbe9d409e30a1605 340 Gene3D G3DSA:3.40.1390.10 1 99 2.7E-36 T 18-10-2018 CH53_2730 c346b6bf8969c324cbe9d409e30a1605 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 18-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CH53_2730 c346b6bf8969c324cbe9d409e30a1605 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 18-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CH53_2730 c346b6bf8969c324cbe9d409e30a1605 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 2.9E-123 T 18-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CH53_2730 c346b6bf8969c324cbe9d409e30a1605 340 Gene3D G3DSA:2.160.10.10 100 309 6.7E-66 T 18-10-2018 CH53_2730 c346b6bf8969c324cbe9d409e30a1605 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 3.4E-7 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_2730 c346b6bf8969c324cbe9d409e30a1605 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 1.5E-9 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_2730 c346b6bf8969c324cbe9d409e30a1605 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 6.8E-7 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_2730 c346b6bf8969c324cbe9d409e30a1605 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 2.1E-23 T 18-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 CH53_2730 c346b6bf8969c324cbe9d409e30a1605 340 SUPERFAMILY SSF51161 33 316 7.61E-86 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily CH53_3426 1ab0f415f2ee640127cd5310849c576c 178 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 20 167 6.8E-37 T 18-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN CH53_3426 1ab0f415f2ee640127cd5310849c576c 178 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 12 167 8.7E-27 T 18-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN CH53_3426 1ab0f415f2ee640127cd5310849c576c 178 Gene3D G3DSA:2.60.40.4150 45 178 1.1E-46 T 18-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily CH53_2771 1e56490939ace62452c447a5ce388975 427 SUPERFAMILY SSF53383 10 395 2.39E-89 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_2771 1e56490939ace62452c447a5ce388975 427 Pfam PF00266 Aminotransferase class-V 20 356 3.2E-23 T 18-10-2018 IPR000192 Aminotransferase class V domain CH53_2771 1e56490939ace62452c447a5ce388975 427 Gene3D G3DSA:3.40.640.10 29 290 1.3E-135 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_2771 1e56490939ace62452c447a5ce388975 427 PIRSF PIRSF000524 12 418 6.3E-103 T 18-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 CH53_2771 1e56490939ace62452c447a5ce388975 427 Gene3D G3DSA:3.90.1150.10 18 388 1.3E-135 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_1537 4ddd74b3dacc8a176fce1e2fa7ad6822 347 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 16 344 42.776 T 18-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 CH53_1537 4ddd74b3dacc8a176fce1e2fa7ad6822 347 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 79 98 5.6E-29 T 18-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CH53_1537 4ddd74b3dacc8a176fce1e2fa7ad6822 347 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 155 176 5.6E-29 T 18-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CH53_1537 4ddd74b3dacc8a176fce1e2fa7ad6822 347 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 208 218 5.6E-29 T 18-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CH53_1537 4ddd74b3dacc8a176fce1e2fa7ad6822 347 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 29 45 5.6E-29 T 18-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CH53_1537 4ddd74b3dacc8a176fce1e2fa7ad6822 347 Gene3D G3DSA:3.40.50.620 19 342 7.9E-144 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_1537 4ddd74b3dacc8a176fce1e2fa7ad6822 347 Gene3D G3DSA:1.10.240.10 199 311 7.9E-144 T 18-10-2018 CH53_1537 4ddd74b3dacc8a176fce1e2fa7ad6822 347 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 17 343 1.9E-117 T 18-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CH53_1537 4ddd74b3dacc8a176fce1e2fa7ad6822 347 Pfam PF00579 tRNA synthetases class I (W and Y) 17 298 3.3E-88 T 18-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_1537 4ddd74b3dacc8a176fce1e2fa7ad6822 347 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 25 34 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_1537 4ddd74b3dacc8a176fce1e2fa7ad6822 347 SUPERFAMILY SSF52374 18 343 2.53E-99 T 18-10-2018 CH53_4364 2455053a6906736a69ca40bce64bc56b 69 PIRSF PIRSF002599 1 69 6.4E-26 T 18-10-2018 IPR012156 Cold shock, CspA GO:0003676 CH53_4364 2455053a6906736a69ca40bce64bc56b 69 SUPERFAMILY SSF50249 3 68 2.06E-26 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_4364 2455053a6906736a69ca40bce64bc56b 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.8E-33 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_4364 2455053a6906736a69ca40bce64bc56b 69 Gene3D G3DSA:2.40.50.140 1 69 1.8E-32 T 18-10-2018 CH53_4364 2455053a6906736a69ca40bce64bc56b 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 18-10-2018 IPR019844 Cold-shock conserved site CH53_4364 2455053a6906736a69ca40bce64bc56b 69 SMART SM00357 5 69 8.3E-32 T 18-10-2018 IPR011129 Cold shock domain GO:0003676 CH53_4364 2455053a6906736a69ca40bce64bc56b 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-18 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_4364 2455053a6906736a69ca40bce64bc56b 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-18 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_4364 2455053a6906736a69ca40bce64bc56b 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-18 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_82 e1b7f225f2ac6227a7c91edfa3a4817c 387 SUPERFAMILY SSF51161 256 335 3.53E-12 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily CH53_82 e1b7f225f2ac6227a7c91edfa3a4817c 387 Pfam PF00483 Nucleotidyl transferase 2 246 5.6E-47 T 18-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CH53_82 e1b7f225f2ac6227a7c91edfa3a4817c 387 Gene3D G3DSA:2.160.10.10 263 345 8.2E-12 T 18-10-2018 CH53_82 e1b7f225f2ac6227a7c91edfa3a4817c 387 Gene3D G3DSA:3.90.550.10 1 252 4.8E-65 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_82 e1b7f225f2ac6227a7c91edfa3a4817c 387 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 283 315 3.3E-5 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_82 e1b7f225f2ac6227a7c91edfa3a4817c 387 SUPERFAMILY SSF53448 1 307 1.53E-66 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_1080 aa5a93043ed28d2cf6f0b6dfa17007a3 459 Gene3D G3DSA:1.20.1250.20 31 443 7.9E-58 T 18-10-2018 CH53_1080 aa5a93043ed28d2cf6f0b6dfa17007a3 459 Pfam PF07690 Major Facilitator Superfamily 77 403 6.7E-27 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_1080 aa5a93043ed28d2cf6f0b6dfa17007a3 459 SUPERFAMILY SSF103473 1 436 2.62E-63 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_2874 ea1bb8c83b34fb2b4ac446aa131550f7 592 Gene3D G3DSA:1.20.1560.10 1 327 1.3E-74 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_2874 ea1bb8c83b34fb2b4ac446aa131550f7 592 Pfam PF00005 ABC transporter 357 505 6.3E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2874 ea1bb8c83b34fb2b4ac446aa131550f7 592 SMART SM00382 366 557 2.3E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2874 ea1bb8c83b34fb2b4ac446aa131550f7 592 Pfam PF00664 ABC transporter transmembrane region 26 295 2.4E-41 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CH53_2874 ea1bb8c83b34fb2b4ac446aa131550f7 592 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2874 ea1bb8c83b34fb2b4ac446aa131550f7 592 SUPERFAMILY SSF90123 12 323 9.68E-69 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_2874 ea1bb8c83b34fb2b4ac446aa131550f7 592 SUPERFAMILY SSF52540 337 576 1.24E-78 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2874 ea1bb8c83b34fb2b4ac446aa131550f7 592 Gene3D G3DSA:3.40.50.300 333 586 2.1E-81 T 18-10-2018 CH53_3938 dfc64b557c2c8536feebd5edfdf3861e 585 Gene3D G3DSA:3.40.50.300 23 463 1.9E-183 T 18-10-2018 CH53_3938 dfc64b557c2c8536feebd5edfdf3861e 585 Pfam PF01268 Formate--tetrahydrofolate ligase 23 584 1.6E-227 T 18-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CH53_3938 dfc64b557c2c8536feebd5edfdf3861e 585 SUPERFAMILY SSF52540 20 583 6.11E-207 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3938 dfc64b557c2c8536feebd5edfdf3861e 585 Gene3D G3DSA:3.10.410.10 473 561 2.0E-27 T 18-10-2018 CH53_3938 dfc64b557c2c8536feebd5edfdf3861e 585 Gene3D G3DSA:3.30.1510.10 138 269 1.9E-183 T 18-10-2018 CH53_3938 dfc64b557c2c8536feebd5edfdf3861e 585 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 350 361 - T 18-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CH53_3938 dfc64b557c2c8536feebd5edfdf3861e 585 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 8 585 40.01 T 18-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CH53_2122 b06b93511c58eb8847ebfaaa953817c0 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 257 435 4.8E-90 T 18-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CH53_2122 b06b93511c58eb8847ebfaaa953817c0 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 256 1.3E-115 T 18-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CH53_2122 b06b93511c58eb8847ebfaaa953817c0 435 ProSitePatterns PS00161 Isocitrate lyase signature. 194 199 - T 18-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 CH53_2122 b06b93511c58eb8847ebfaaa953817c0 435 PIRSF PIRSF001362 1 435 6.2E-226 T 18-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CH53_2122 b06b93511c58eb8847ebfaaa953817c0 435 SUPERFAMILY SSF51621 5 435 1.26E-155 T 18-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CH53_2122 b06b93511c58eb8847ebfaaa953817c0 435 Pfam PF00463 Isocitrate lyase family 9 256 1.6E-61 T 18-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CH53_2122 b06b93511c58eb8847ebfaaa953817c0 435 Pfam PF00463 Isocitrate lyase family 258 435 1.5E-48 T 18-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CH53_2122 b06b93511c58eb8847ebfaaa953817c0 435 Gene3D G3DSA:3.20.20.60 1 418 6.6E-188 T 18-10-2018 CH53_1712 5b88dff81e60130a8075b70b9c74ca35 429 Gene3D G3DSA:1.20.1250.20 233 427 5.0E-32 T 18-10-2018 CH53_1712 5b88dff81e60130a8075b70b9c74ca35 429 Pfam PF07690 Major Facilitator Superfamily 20 388 2.7E-58 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_1712 5b88dff81e60130a8075b70b9c74ca35 429 Gene3D G3DSA:1.20.1250.20 7 203 2.4E-49 T 18-10-2018 CH53_1712 5b88dff81e60130a8075b70b9c74ca35 429 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 23 422 1.9E-137 T 18-10-2018 CH53_1712 5b88dff81e60130a8075b70b9c74ca35 429 PIRSF PIRSF002808 3 427 5.9E-34 T 18-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 CH53_1712 5b88dff81e60130a8075b70b9c74ca35 429 SUPERFAMILY SSF103473 8 426 4.19E-84 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_4018 a01dc17c320cf0ec720315f22bf98d4e 325 Gene3D G3DSA:3.40.190.10 155 213 9.1E-34 T 18-10-2018 CH53_4018 a01dc17c320cf0ec720315f22bf98d4e 325 SUPERFAMILY SSF53850 82 319 2.72E-38 T 18-10-2018 CH53_4018 a01dc17c320cf0ec720315f22bf98d4e 325 Pfam PF03466 LysR substrate binding domain 81 213 6.9E-23 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_4018 a01dc17c320cf0ec720315f22bf98d4e 325 Pfam PF03466 LysR substrate binding domain 236 317 6.6E-14 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_4018 a01dc17c320cf0ec720315f22bf98d4e 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 57 3.4E-17 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_4018 a01dc17c320cf0ec720315f22bf98d4e 325 Gene3D G3DSA:3.40.190.10 290 315 1.6E-19 T 18-10-2018 CH53_4018 a01dc17c320cf0ec720315f22bf98d4e 325 Gene3D G3DSA:3.40.190.10 84 154 9.1E-34 T 18-10-2018 CH53_4018 a01dc17c320cf0ec720315f22bf98d4e 325 SUPERFAMILY SSF46785 1 80 2.62E-19 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_4018 a01dc17c320cf0ec720315f22bf98d4e 325 Gene3D G3DSA:3.40.190.10 231 289 1.6E-19 T 18-10-2018 CH53_4018 a01dc17c320cf0ec720315f22bf98d4e 325 Gene3D G3DSA:1.10.10.10 1 83 7.5E-26 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1208 a75df8314b990ce55412ff500579326b 370 Gene3D G3DSA:3.20.20.70 84 350 2.2E-22 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_1208 a75df8314b990ce55412ff500579326b 370 Pfam PF04055 Radical SAM superfamily 96 240 1.7E-9 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_1208 a75df8314b990ce55412ff500579326b 370 SUPERFAMILY SSF102114 95 353 2.22E-25 T 18-10-2018 CH53_1208 a75df8314b990ce55412ff500579326b 370 TIGRFAM TIGR03977 rSAM_pair_HxsC: His-Xaa-Ser system radical SAM maturase HxsC 68 358 2.5E-118 T 18-10-2018 IPR024032 His-Xaa-Ser system radical SAM maturase HxsC CH53_1208 a75df8314b990ce55412ff500579326b 370 Pfam PF13394 4Fe-4S single cluster domain 98 186 6.9E-5 T 18-10-2018 CH53_112 422f8a1aa74a5447c0035088211f0e12 711 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 706 1.0E-289 T 18-10-2018 IPR010020 Integral membrane protein, YccS/YhfK CH53_112 422f8a1aa74a5447c0035088211f0e12 711 Pfam PF12805 FUSC-like inner membrane protein yccS 68 347 6.1E-111 T 18-10-2018 IPR032692 Integral membrane protein YccS, N-terminal CH53_112 422f8a1aa74a5447c0035088211f0e12 711 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 706 0.0 T 18-10-2018 IPR010019 Integral membrane protein, YccS CH53_112 422f8a1aa74a5447c0035088211f0e12 711 Pfam PF13515 Fusaric acid resistance protein-like 407 526 1.2E-23 T 18-10-2018 CH53_3388 44efe8fd50c6e345f72974bca7c1ee0b 512 Pfam PF13500 AAA domain 5 227 2.4E-22 T 18-10-2018 CH53_3388 44efe8fd50c6e345f72974bca7c1ee0b 512 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 499 1.8E-160 T 18-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CH53_3388 44efe8fd50c6e345f72974bca7c1ee0b 512 SUPERFAMILY SSF52317 254 459 2.9E-35 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_3388 44efe8fd50c6e345f72974bca7c1ee0b 512 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 451 2.5E-60 T 18-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CH53_3388 44efe8fd50c6e345f72974bca7c1ee0b 512 Gene3D G3DSA:3.40.50.880 251 404 5.7E-22 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_3388 44efe8fd50c6e345f72974bca7c1ee0b 512 SUPERFAMILY SSF52540 1 228 1.76E-54 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3388 44efe8fd50c6e345f72974bca7c1ee0b 512 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 506 185.314 T 18-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CH53_3388 44efe8fd50c6e345f72974bca7c1ee0b 512 Gene3D G3DSA:3.40.50.300 3 240 1.8E-56 T 18-10-2018 CH53_1736 b826d452b154d272694bc26ea55ec4ce 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.275 T 18-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CH53_1736 b826d452b154d272694bc26ea55ec4ce 454 Pfam PF12631 MnmE helical domain 123 451 2.3E-60 T 18-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 CH53_1736 b826d452b154d272694bc26ea55ec4ce 454 SUPERFAMILY SSF116878 121 454 3.01E-51 T 18-10-2018 CH53_1736 b826d452b154d272694bc26ea55ec4ce 454 SUPERFAMILY SSF52540 72 372 1.35E-44 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1736 b826d452b154d272694bc26ea55ec4ce 454 Gene3D G3DSA:3.40.50.300 217 382 2.2E-103 T 18-10-2018 CH53_1736 b826d452b154d272694bc26ea55ec4ce 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 7.3E-101 T 18-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CH53_1736 b826d452b154d272694bc26ea55ec4ce 454 Pfam PF01926 50S ribosome-binding GTPase 218 307 2.4E-24 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_1736 b826d452b154d272694bc26ea55ec4ce 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 9.1E-35 T 18-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 CH53_1736 b826d452b154d272694bc26ea55ec4ce 454 Gene3D G3DSA:1.20.120.430 122 454 2.2E-103 T 18-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 CH53_1736 b826d452b154d272694bc26ea55ec4ce 454 Gene3D G3DSA:3.30.1360.120 1 121 2.0E-38 T 18-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CH53_1736 b826d452b154d272694bc26ea55ec4ce 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 368 4.2E-22 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CH53_1896 074a8d9200bab3f2f4287ceee1123d1b 282 Pfam PF00230 Major intrinsic protein 6 253 4.0E-72 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_1896 074a8d9200bab3f2f4287ceee1123d1b 282 Gene3D G3DSA:1.20.1080.10 3 261 1.7E-108 T 18-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CH53_1896 074a8d9200bab3f2f4287ceee1123d1b 282 ProSitePatterns PS00221 MIP family signature. 68 76 - T 18-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 CH53_1896 074a8d9200bab3f2f4287ceee1123d1b 282 PRINTS PR00783 Major intrinsic protein family signature 87 106 1.8E-52 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_1896 074a8d9200bab3f2f4287ceee1123d1b 282 PRINTS PR00783 Major intrinsic protein family signature 236 256 1.8E-52 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_1896 074a8d9200bab3f2f4287ceee1123d1b 282 PRINTS PR00783 Major intrinsic protein family signature 50 74 1.8E-52 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_1896 074a8d9200bab3f2f4287ceee1123d1b 282 PRINTS PR00783 Major intrinsic protein family signature 153 171 1.8E-52 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_1896 074a8d9200bab3f2f4287ceee1123d1b 282 PRINTS PR00783 Major intrinsic protein family signature 186 208 1.8E-52 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_1896 074a8d9200bab3f2f4287ceee1123d1b 282 PRINTS PR00783 Major intrinsic protein family signature 11 30 1.8E-52 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_1896 074a8d9200bab3f2f4287ceee1123d1b 282 SUPERFAMILY SSF81338 11 259 3.27E-80 T 18-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CH53_1896 074a8d9200bab3f2f4287ceee1123d1b 282 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 6.2E-73 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_1622 4320a5517508e5cfd9a83ab95ecbdd1a 495 Pfam PF00675 Insulinase (Peptidase family M16) 51 161 6.9E-10 T 18-10-2018 IPR011765 Peptidase M16, N-terminal CH53_1622 4320a5517508e5cfd9a83ab95ecbdd1a 495 Gene3D G3DSA:3.30.830.10 8 256 2.0E-50 T 18-10-2018 CH53_1622 4320a5517508e5cfd9a83ab95ecbdd1a 495 Gene3D G3DSA:3.30.830.10 257 472 3.3E-102 T 18-10-2018 CH53_1622 4320a5517508e5cfd9a83ab95ecbdd1a 495 SUPERFAMILY SSF63411 273 466 2.75E-5 T 18-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CH53_1622 4320a5517508e5cfd9a83ab95ecbdd1a 495 Pfam PF05193 Peptidase M16 inactive domain 201 378 3.5E-16 T 18-10-2018 IPR007863 Peptidase M16, C-terminal CH53_1622 4320a5517508e5cfd9a83ab95ecbdd1a 495 SUPERFAMILY SSF63411 29 240 6.46E-26 T 18-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CH53_3894 998c89d8397b71ecdf3e90ae36efab8c 268 Gene3D G3DSA:3.20.20.70 1 268 1.7E-99 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3894 998c89d8397b71ecdf3e90ae36efab8c 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 1.9E-95 T 18-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CH53_3894 998c89d8397b71ecdf3e90ae36efab8c 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 2.4E-103 T 18-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CH53_3894 998c89d8397b71ecdf3e90ae36efab8c 268 SUPERFAMILY SSF51366 1 266 1.04E-91 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CH53_3894 998c89d8397b71ecdf3e90ae36efab8c 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 18-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CH53_3894 998c89d8397b71ecdf3e90ae36efab8c 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.585 T 18-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CH53_255 63827a794e42962c2504ddc418299130 327 SUPERFAMILY SSF52540 6 190 4.88E-27 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_255 63827a794e42962c2504ddc418299130 327 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 240 320 6.0E-7 T 18-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CH53_255 63827a794e42962c2504ddc418299130 327 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 166 2.3E-39 T 18-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CH53_255 63827a794e42962c2504ddc418299130 327 SMART SM00833 239 322 5.7E-6 T 18-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CH53_255 63827a794e42962c2504ddc418299130 327 Gene3D G3DSA:3.40.50.300 2 195 2.9E-46 T 18-10-2018 CH53_2675 9de9cab1626c3a3d11a7f8551de73a71 71 Gene3D G3DSA:3.40.50.2300 10 62 2.4E-7 T 18-10-2018 CH53_2675 9de9cab1626c3a3d11a7f8551de73a71 71 SUPERFAMILY SSF53822 15 61 4.19E-8 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_4144 299a47da6dfbd872b0e35637bd546d13 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 3.0E-14 T 18-10-2018 CH53_4144 299a47da6dfbd872b0e35637bd546d13 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.068 T 18-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_4144 299a47da6dfbd872b0e35637bd546d13 118 Gene3D G3DSA:1.10.1900.20 56 118 5.1E-29 T 18-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_4144 299a47da6dfbd872b0e35637bd546d13 118 Gene3D G3DSA:1.10.720.90 2 55 5.8E-25 T 18-10-2018 CH53_4144 299a47da6dfbd872b0e35637bd546d13 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 18-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_4144 299a47da6dfbd872b0e35637bd546d13 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 18-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_4144 299a47da6dfbd872b0e35637bd546d13 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 18-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_4144 299a47da6dfbd872b0e35637bd546d13 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 18-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_4144 299a47da6dfbd872b0e35637bd546d13 118 SUPERFAMILY SSF74731 3 116 2.88E-50 T 18-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_4144 299a47da6dfbd872b0e35637bd546d13 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.8E-53 T 18-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_4144 299a47da6dfbd872b0e35637bd546d13 118 Pfam PF00453 Ribosomal protein L20 3 109 3.2E-49 T 18-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1642 5064c8f10d91e2583566b19443dc8c51 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1642 5064c8f10d91e2583566b19443dc8c51 326 SUPERFAMILY SSF52540 3 253 4.98E-65 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1642 5064c8f10d91e2583566b19443dc8c51 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 2.2E-18 T 18-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CH53_1642 5064c8f10d91e2583566b19443dc8c51 326 Gene3D G3DSA:3.40.50.300 1 321 1.6E-93 T 18-10-2018 CH53_1642 5064c8f10d91e2583566b19443dc8c51 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 315 6.9E-26 T 18-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CH53_1642 5064c8f10d91e2583566b19443dc8c51 326 Pfam PF00005 ABC transporter 24 181 6.6E-27 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1642 5064c8f10d91e2583566b19443dc8c51 326 SMART SM00382 32 231 2.9E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1727 a14b92eaa1eab7ac561e088811753fa1 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 4.1E-68 T 18-10-2018 CH53_1727 a14b92eaa1eab7ac561e088811753fa1 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 5.1E-28 T 18-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CH53_1727 a14b92eaa1eab7ac561e088811753fa1 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 18-10-2018 CH53_1727 a14b92eaa1eab7ac561e088811753fa1 269 Gene3D G3DSA:3.40.50.1000 5 265 7.2E-93 T 18-10-2018 IPR023214 HAD superfamily CH53_1727 a14b92eaa1eab7ac561e088811753fa1 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 7.4E-67 T 18-10-2018 IPR000150 Cof family GO:0016787 CH53_1727 a14b92eaa1eab7ac561e088811753fa1 269 SUPERFAMILY SSF56784 1 268 5.69E-77 T 18-10-2018 IPR036412 HAD-like superfamily CH53_1727 a14b92eaa1eab7ac561e088811753fa1 269 Gene3D G3DSA:3.30.1240.10 87 193 7.2E-93 T 18-10-2018 CH53_1952 c84c4e928c6f5135cd28f3af5ec82dd6 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 9 306 1.2E-143 T 18-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 CH53_1952 c84c4e928c6f5135cd28f3af5ec82dd6 308 SUPERFAMILY SSF56752 6 307 1.44E-105 T 18-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 CH53_1952 c84c4e928c6f5135cd28f3af5ec82dd6 308 Gene3D G3DSA:3.20.10.10 137 288 3.9E-111 T 18-10-2018 CH53_1952 c84c4e928c6f5135cd28f3af5ec82dd6 308 Gene3D G3DSA:3.30.470.10 9 126 3.9E-111 T 18-10-2018 CH53_1952 c84c4e928c6f5135cd28f3af5ec82dd6 308 ProSitePatterns PS00770 Aminotransferases class-IV signature. 193 222 - T 18-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 CH53_1952 c84c4e928c6f5135cd28f3af5ec82dd6 308 Pfam PF01063 Amino-transferase class IV 35 267 1.6E-48 T 18-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 CH53_4064 b6d81e85e82538b789d55e5d697522ec 258 Gene3D G3DSA:3.90.210.10 22 251 2.4E-57 T 18-10-2018 CH53_4064 b6d81e85e82538b789d55e5d697522ec 258 PRINTS PR01395 Bordetella pertussis toxin A subunit signature 146 170 7.5E-10 T 18-10-2018 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 CH53_4064 b6d81e85e82538b789d55e5d697522ec 258 PRINTS PR01395 Bordetella pertussis toxin A subunit signature 22 45 7.5E-10 T 18-10-2018 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 CH53_4064 b6d81e85e82538b789d55e5d697522ec 258 PRINTS PR01395 Bordetella pertussis toxin A subunit signature 97 118 7.5E-10 T 18-10-2018 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 CH53_4064 b6d81e85e82538b789d55e5d697522ec 258 Pfam PF02917 Pertussis toxin, subunit 1 24 204 6.1E-19 T 18-10-2018 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 CH53_4064 b6d81e85e82538b789d55e5d697522ec 258 SUPERFAMILY SSF56399 23 249 4.82E-68 T 18-10-2018 CH53_3832 a345fb7b667aeccd80a6ac2face7ec98 753 Pfam PF05860 haemagglutination activity domain 41 161 2.0E-24 T 18-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal CH53_3832 a345fb7b667aeccd80a6ac2face7ec98 753 SMART SM00912 49 171 4.9E-29 T 18-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal CH53_3832 a345fb7b667aeccd80a6ac2face7ec98 753 SUPERFAMILY SSF51126 42 308 7.22E-35 T 18-10-2018 IPR011050 Pectin lyase fold/virulence factor CH53_3832 a345fb7b667aeccd80a6ac2face7ec98 753 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 67 152 9.0E-14 T 18-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal CH53_3832 a345fb7b667aeccd80a6ac2face7ec98 753 Gene3D G3DSA:2.160.20.10 36 330 5.9E-58 T 18-10-2018 IPR012334 Pectin lyase fold CH53_3832 a345fb7b667aeccd80a6ac2face7ec98 753 Pfam PF13332 Haemagluttinin repeat 470 578 4.9E-4 T 18-10-2018 IPR025157 Hemagglutinin repeat CH53_3832 a345fb7b667aeccd80a6ac2face7ec98 753 Pfam PF13332 Haemagluttinin repeat 399 443 0.0044 T 18-10-2018 IPR025157 Hemagglutinin repeat CH53_2275 db567ce605158372533e075a2ddc8155 196 SUPERFAMILY SSF53697 2 191 4.85E-51 T 18-10-2018 CH53_2275 db567ce605158372533e075a2ddc8155 196 Pfam PF13580 SIS domain 9 144 6.7E-33 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_2275 db567ce605158372533e075a2ddc8155 196 Gene3D G3DSA:3.40.50.10490 2 196 4.3E-70 T 18-10-2018 CH53_2275 db567ce605158372533e075a2ddc8155 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 61.413 T 18-10-2018 IPR023070 DnaA initiator-associating protein CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 5.3E-25 T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 5.3E-25 T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 5.3E-25 T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 5.3E-25 T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 1.6E-28 T 18-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 4.6E-46 T 18-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 SUPERFAMILY SSF53671 4 306 3.09E-99 T 18-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 Gene3D G3DSA:3.40.50.1370 8 304 1.0E-122 T 18-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.2E-119 T 18-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 1.2E-35 T 18-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 1.2E-35 T 18-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 1.2E-35 T 18-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 1.2E-35 T 18-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 1.2E-35 T 18-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.2E-35 T 18-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 Gene3D G3DSA:3.40.50.1370 135 292 1.0E-122 T 18-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CH53_2237 483d49164bd2d9e1eb0423a191c91669 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.301 T 18-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_711 f3f3ae0b9720d6693efa97bc028784f0 253 SUPERFAMILY SSF88713 1 252 2.67E-79 T 18-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CH53_711 f3f3ae0b9720d6693efa97bc028784f0 253 Pfam PF04794 YdjC-like protein 5 242 7.7E-64 T 18-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like CH53_711 f3f3ae0b9720d6693efa97bc028784f0 253 Gene3D G3DSA:3.20.20.370 1 253 2.4E-74 T 18-10-2018 CH53_711 f3f3ae0b9720d6693efa97bc028784f0 253 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 250 41.655 T 18-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 CH53_3200 28b37ea0e05fdc905e0e54edc7629645 583 SUPERFAMILY SSF52540 330 551 2.88E-61 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3200 28b37ea0e05fdc905e0e54edc7629645 583 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3200 28b37ea0e05fdc905e0e54edc7629645 583 Pfam PF00005 ABC transporter 348 491 1.1E-27 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3200 28b37ea0e05fdc905e0e54edc7629645 583 SUPERFAMILY SSF52540 7 229 9.87E-54 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3200 28b37ea0e05fdc905e0e54edc7629645 583 SMART SM00382 356 537 1.9E-15 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3200 28b37ea0e05fdc905e0e54edc7629645 583 SMART SM00382 34 268 1.9E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3200 28b37ea0e05fdc905e0e54edc7629645 583 Gene3D G3DSA:3.40.50.300 2 239 3.9E-58 T 18-10-2018 CH53_3200 28b37ea0e05fdc905e0e54edc7629645 583 Gene3D G3DSA:3.40.50.300 321 561 2.9E-64 T 18-10-2018 CH53_3200 28b37ea0e05fdc905e0e54edc7629645 583 Pfam PF00005 ABC transporter 28 167 3.5E-27 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1284 0c496cc56fe2dc06319970271bb02ce6 111 Pfam PF03840 Preprotein translocase SecG subunit 5 72 5.2E-21 T 18-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CH53_1284 0c496cc56fe2dc06319970271bb02ce6 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 4.1E-41 T 18-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CH53_1284 0c496cc56fe2dc06319970271bb02ce6 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 4.1E-41 T 18-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CH53_1284 0c496cc56fe2dc06319970271bb02ce6 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 4.1E-41 T 18-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CH53_1284 0c496cc56fe2dc06319970271bb02ce6 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 4.1E-41 T 18-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CH53_1284 0c496cc56fe2dc06319970271bb02ce6 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 2.3E-25 T 18-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CH53_2314 de4b3965680f5d9b9fe7c6008a949446 297 SUPERFAMILY SSF103481 42 131 9.94E-11 T 18-10-2018 CH53_2314 de4b3965680f5d9b9fe7c6008a949446 297 Pfam PF00892 EamA-like transporter family 7 131 1.5E-12 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_2314 de4b3965680f5d9b9fe7c6008a949446 297 Pfam PF00892 EamA-like transporter family 141 278 2.4E-14 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_2314 de4b3965680f5d9b9fe7c6008a949446 297 SUPERFAMILY SSF103481 203 283 1.96E-10 T 18-10-2018 CH53_659 c640deb999381aa863f33244907df7cc 295 Gene3D G3DSA:3.20.20.140 3 291 2.7E-101 T 18-10-2018 CH53_659 c640deb999381aa863f33244907df7cc 295 SUPERFAMILY SSF51556 5 290 9.83E-93 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_659 c640deb999381aa863f33244907df7cc 295 Pfam PF02126 Phosphotriesterase family 4 290 2.2E-104 T 18-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 CH53_659 c640deb999381aa863f33244907df7cc 295 PIRSF PIRSF016839 1 295 2.9E-121 T 18-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 CH53_3387 3e74ccf462400ce9d5574746aa41a3e5 271 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3387 3e74ccf462400ce9d5574746aa41a3e5 271 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 11 199 3.6E-81 T 18-10-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 CH53_3387 3e74ccf462400ce9d5574746aa41a3e5 271 Pfam PF00005 ABC transporter 17 165 7.3E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3387 3e74ccf462400ce9d5574746aa41a3e5 271 SMART SM00382 26 212 1.6E-7 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3387 3e74ccf462400ce9d5574746aa41a3e5 271 SUPERFAMILY SSF52540 7 218 1.09E-54 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3387 3e74ccf462400ce9d5574746aa41a3e5 271 Gene3D G3DSA:3.40.50.300 2 268 8.5E-66 T 18-10-2018 CH53_3554 39642a8323169bf36755daa43f8ba3a5 428 Pfam PF07559 Flagellar basal body protein FlaE 171 309 4.8E-19 T 18-10-2018 IPR011491 Flagellar hook protein FlgE CH53_3554 39642a8323169bf36755daa43f8ba3a5 428 Pfam PF00460 Flagella basal body rod protein 4 33 3.2E-11 T 18-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CH53_3554 39642a8323169bf36755daa43f8ba3a5 428 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 350 427 1.7E-22 T 18-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH53_3554 39642a8323169bf36755daa43f8ba3a5 428 SUPERFAMILY SSF117143 73 389 1.12E-76 T 18-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CH53_3554 39642a8323169bf36755daa43f8ba3a5 428 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 18-10-2018 IPR019776 Flagellar basal body rod protein, conserved site CH53_3554 39642a8323169bf36755daa43f8ba3a5 428 Gene3D G3DSA:2.60.98.20 146 310 1.0E-33 T 18-10-2018 IPR037058 Flagellar hook protein FlgE superfamily CH53_3554 39642a8323169bf36755daa43f8ba3a5 428 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 410 2.0E-93 T 18-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CH53_891 4e2f09d9e7972fd1b0304bbe905d4272 715 Gene3D G3DSA:1.20.1560.10 162 448 2.8E-25 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_891 4e2f09d9e7972fd1b0304bbe905d4272 715 Gene3D G3DSA:3.90.70.10 16 137 6.5E-24 T 18-10-2018 CH53_891 4e2f09d9e7972fd1b0304bbe905d4272 715 SMART SM00382 509 697 1.2E-17 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_891 4e2f09d9e7972fd1b0304bbe905d4272 715 SUPERFAMILY SSF52540 472 702 3.52E-52 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_891 4e2f09d9e7972fd1b0304bbe905d4272 715 Gene3D G3DSA:3.40.50.300 478 711 1.2E-62 T 18-10-2018 CH53_891 4e2f09d9e7972fd1b0304bbe905d4272 715 ProSitePatterns PS00211 ABC transporters family signature. 621 635 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_891 4e2f09d9e7972fd1b0304bbe905d4272 715 Pfam PF00005 ABC transporter 500 649 1.3E-28 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_891 4e2f09d9e7972fd1b0304bbe905d4272 715 SUPERFAMILY SSF90123 165 444 9.42E-32 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_891 4e2f09d9e7972fd1b0304bbe905d4272 715 Pfam PF00664 ABC transporter transmembrane region 171 430 3.7E-11 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CH53_891 4e2f09d9e7972fd1b0304bbe905d4272 715 Pfam PF03412 Peptidase C39 family 9 133 5.7E-23 T 18-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CH53_2721 258b0f15a865d32146e28fdb17489861 285 SUPERFAMILY SSF46934 4 55 4.01E-18 T 18-10-2018 IPR009060 UBA-like superfamily GO:0005515 CH53_2721 258b0f15a865d32146e28fdb17489861 285 SUPERFAMILY SSF54713 56 141 1.44E-20 T 18-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CH53_2721 258b0f15a865d32146e28fdb17489861 285 Gene3D G3DSA:3.30.479.20 57 143 2.0E-29 T 18-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CH53_2721 258b0f15a865d32146e28fdb17489861 285 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 284 4.1E-115 T 18-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CH53_2721 258b0f15a865d32146e28fdb17489861 285 Hamap MF_00050 Elongation factor Ts [tsf]. 1 282 78.922 T 18-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CH53_2721 258b0f15a865d32146e28fdb17489861 285 SUPERFAMILY SSF54713 144 283 1.05E-52 T 18-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CH53_2721 258b0f15a865d32146e28fdb17489861 285 Gene3D G3DSA:1.10.8.10 1 56 1.7E-25 T 18-10-2018 CH53_2721 258b0f15a865d32146e28fdb17489861 285 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 18-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CH53_2721 258b0f15a865d32146e28fdb17489861 285 Gene3D G3DSA:1.10.286.20 189 228 6.3E-23 T 18-10-2018 CH53_2721 258b0f15a865d32146e28fdb17489861 285 Pfam PF00889 Elongation factor TS 73 265 5.3E-67 T 18-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 CH53_2367 d9b9754aeed72cfd603f927952dc7256 277 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 18-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CH53_2367 d9b9754aeed72cfd603f927952dc7256 277 PRINTS PR00069 Aldo-keto reductase signature 123 140 8.0E-47 T 18-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CH53_2367 d9b9754aeed72cfd603f927952dc7256 277 PRINTS PR00069 Aldo-keto reductase signature 37 61 8.0E-47 T 18-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CH53_2367 d9b9754aeed72cfd603f927952dc7256 277 PRINTS PR00069 Aldo-keto reductase signature 91 109 8.0E-47 T 18-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CH53_2367 d9b9754aeed72cfd603f927952dc7256 277 PRINTS PR00069 Aldo-keto reductase signature 196 220 8.0E-47 T 18-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CH53_2367 d9b9754aeed72cfd603f927952dc7256 277 PRINTS PR00069 Aldo-keto reductase signature 157 186 8.0E-47 T 18-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CH53_2367 d9b9754aeed72cfd603f927952dc7256 277 SUPERFAMILY SSF51430 5 267 4.19E-87 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CH53_2367 d9b9754aeed72cfd603f927952dc7256 277 Gene3D G3DSA:3.20.20.100 1 275 1.7E-117 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CH53_2367 d9b9754aeed72cfd603f927952dc7256 277 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 18-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CH53_2367 d9b9754aeed72cfd603f927952dc7256 277 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 18-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CH53_2367 d9b9754aeed72cfd603f927952dc7256 277 Pfam PF00248 Aldo/keto reductase family 18 192 1.5E-36 T 18-10-2018 IPR023210 NADP-dependent oxidoreductase domain CH53_2367 d9b9754aeed72cfd603f927952dc7256 277 Pfam PF00248 Aldo/keto reductase family 202 260 2.3E-9 T 18-10-2018 IPR023210 NADP-dependent oxidoreductase domain CH53_2367 d9b9754aeed72cfd603f927952dc7256 277 PIRSF PIRSF000097 1 272 4.8E-94 T 18-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CH53_4082 e245ff1ef9972109fdda38b932288f0e 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 41.107 T 18-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 CH53_4082 e245ff1ef9972109fdda38b932288f0e 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 366 1.9E-163 T 18-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 CH53_4082 e245ff1ef9972109fdda38b932288f0e 370 SUPERFAMILY SSF53067 6 341 6.04E-26 T 18-10-2018 CH53_4082 e245ff1ef9972109fdda38b932288f0e 370 Gene3D G3DSA:3.30.420.40 11 362 2.3E-130 T 18-10-2018 CH53_4082 e245ff1ef9972109fdda38b932288f0e 370 Gene3D G3DSA:3.30.420.40 145 327 2.3E-130 T 18-10-2018 CH53_2802 3cd4304e39df1283905edb796ed85a4b 133 Gene3D G3DSA:3.30.310.230 1 133 2.5E-58 T 18-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 CH53_2802 3cd4304e39df1283905edb796ed85a4b 133 Pfam PF07417 Transcriptional regulator Crl 5 122 6.5E-55 T 18-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 CH53_2802 3cd4304e39df1283905edb796ed85a4b 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 3 128 32.592 T 18-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 CH53_2189 f37e5685bd9f061974793fbbaec99a6c 286 Gene3D G3DSA:3.20.20.70 1 213 2.3E-65 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2189 f37e5685bd9f061974793fbbaec99a6c 286 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 1 284 1.3E-120 T 18-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CH53_2189 f37e5685bd9f061974793fbbaec99a6c 286 SUPERFAMILY SSF51395 2 284 8.06E-78 T 18-10-2018 CH53_2189 f37e5685bd9f061974793fbbaec99a6c 286 Gene3D G3DSA:1.10.1200.80 218 286 3.2E-7 T 18-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CH53_2189 f37e5685bd9f061974793fbbaec99a6c 286 Pfam PF01207 Dihydrouridine synthase (Dus) 1 283 3.7E-104 T 18-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CH53_2189 f37e5685bd9f061974793fbbaec99a6c 286 PIRSF PIRSF006621 1 286 6.6E-88 T 18-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CH53_2189 f37e5685bd9f061974793fbbaec99a6c 286 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 59 77 - T 18-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CH53_121 a848045f59d813c1d0c039f2704b15af 186 SUPERFAMILY SSF159594 23 184 7.85E-30 T 18-10-2018 CH53_121 a848045f59d813c1d0c039f2704b15af 186 Gene3D G3DSA:3.40.50.10610 13 157 1.0E-6 T 18-10-2018 CH53_121 a848045f59d813c1d0c039f2704b15af 186 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 25 179 1.1E-40 T 18-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CH53_1711 ebc121775e04f73e765ba644a97a10b4 434 SUPERFAMILY SSF69304 28 430 3.66E-21 T 18-10-2018 CH53_1711 ebc121775e04f73e765ba644a97a10b4 434 Gene3D G3DSA:2.120.10.30 307 433 1.0E-18 T 18-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CH53_1711 ebc121775e04f73e765ba644a97a10b4 434 Pfam PF12566 Protein of unknown function (DUF3748) 74 193 8.1E-56 T 18-10-2018 IPR022223 Protein of unknown function DUF3748 CH53_1481 d252f117c8daca16b432349f8e30f5bd 136 SUPERFAMILY SSF54686 3 133 4.84E-55 T 18-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 CH53_1481 d252f117c8daca16b432349f8e30f5bd 136 Gene3D G3DSA:3.90.1170.10 1 136 1.3E-55 T 18-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 CH53_1481 d252f117c8daca16b432349f8e30f5bd 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 18-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1481 d252f117c8daca16b432349f8e30f5bd 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.821 T 18-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1481 d252f117c8daca16b432349f8e30f5bd 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 9.2E-48 T 18-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CH53_1481 d252f117c8daca16b432349f8e30f5bd 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 4.3E-60 T 18-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1481 d252f117c8daca16b432349f8e30f5bd 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 18-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1481 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 1.0E-40 T 18-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1481 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 1.0E-40 T 18-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1481 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 1.0E-40 T 18-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1481 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 1.0E-40 T 18-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2429 6c0fc83eac87aab04690600f1958c509 317 Gene3D G3DSA:3.40.50.12260 182 287 7.2E-93 T 18-10-2018 CH53_2429 6c0fc83eac87aab04690600f1958c509 317 SUPERFAMILY SSF53807 32 296 9.81E-66 T 18-10-2018 CH53_2429 6c0fc83eac87aab04690600f1958c509 317 Gene3D G3DSA:3.40.50.1980 44 304 7.2E-93 T 18-10-2018 CH53_2429 6c0fc83eac87aab04690600f1958c509 317 Pfam PF01497 Periplasmic binding protein 52 287 5.8E-32 T 18-10-2018 IPR002491 ABC transporter periplasmic binding domain CH53_3868 61528ee0a7f8709b2b8b1d8f7ab38125 448 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 181 2.6E-62 T 18-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CH53_3868 61528ee0a7f8709b2b8b1d8f7ab38125 448 Gene3D G3DSA:3.40.50.720 1 204 7.1E-75 T 18-10-2018 CH53_3868 61528ee0a7f8709b2b8b1d8f7ab38125 448 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 422 1.8E-134 T 18-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CH53_3868 61528ee0a7f8709b2b8b1d8f7ab38125 448 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 298 2.9E-38 T 18-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CH53_3868 61528ee0a7f8709b2b8b1d8f7ab38125 448 SUPERFAMILY SSF52413 311 437 1.7E-39 T 18-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 CH53_3868 61528ee0a7f8709b2b8b1d8f7ab38125 448 SUPERFAMILY SSF48179 206 301 7.48E-33 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_3868 61528ee0a7f8709b2b8b1d8f7ab38125 448 PIRSF PIRSF000124 1 441 1.2E-145 T 18-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CH53_3868 61528ee0a7f8709b2b8b1d8f7ab38125 448 SUPERFAMILY SSF51735 1 197 3.01E-53 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3868 61528ee0a7f8709b2b8b1d8f7ab38125 448 Gene3D G3DSA:3.40.50.720 237 448 4.3E-76 T 18-10-2018 CH53_3868 61528ee0a7f8709b2b8b1d8f7ab38125 448 Gene3D G3DSA:1.20.5.100 205 236 4.8E-19 T 18-10-2018 CH53_3868 61528ee0a7f8709b2b8b1d8f7ab38125 448 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 322 426 2.6E-30 T 18-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CH53_3868 61528ee0a7f8709b2b8b1d8f7ab38125 448 SMART SM00984 322 426 4.3E-52 T 18-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CH53_3868 61528ee0a7f8709b2b8b1d8f7ab38125 448 PIRSF PIRSF500134 1 444 8.3E-184 T 18-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CH53_4252 d399dc8031974be39f1797f3e0c931fe 714 Pfam PF02310 B12 binding domain 586 699 8.3E-17 T 18-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CH53_4252 d399dc8031974be39f1797f3e0c931fe 714 SUPERFAMILY SSF52242 555 713 5.36E-54 T 18-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 CH53_4252 d399dc8031974be39f1797f3e0c931fe 714 Pfam PF01642 Methylmalonyl-CoA mutase 29 539 7.0E-232 T 18-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CH53_4252 d399dc8031974be39f1797f3e0c931fe 714 Gene3D G3DSA:3.20.20.240 27 542 1.8E-236 T 18-10-2018 CH53_4252 d399dc8031974be39f1797f3e0c931fe 714 Gene3D G3DSA:3.40.50.280 569 714 5.4E-48 T 18-10-2018 CH53_4252 d399dc8031974be39f1797f3e0c931fe 714 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 370 395 - T 18-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CH53_4252 d399dc8031974be39f1797f3e0c931fe 714 SUPERFAMILY SSF51703 2 542 3.66E-215 T 18-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CH53_4252 d399dc8031974be39f1797f3e0c931fe 714 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 28 547 1.6E-272 T 18-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CH53_4252 d399dc8031974be39f1797f3e0c931fe 714 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 583 713 6.0E-62 T 18-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CH53_2859 3654fc2dd1ed461ade173c8170c46825 104 Gene3D G3DSA:3.30.300.90 1 89 9.6E-35 T 18-10-2018 CH53_2859 3654fc2dd1ed461ade173c8170c46825 104 Pfam PF01722 BolA-like protein 10 83 4.4E-29 T 18-10-2018 IPR002634 BolA protein CH53_2859 3654fc2dd1ed461ade173c8170c46825 104 PIRSF PIRSF003113 1 99 1.2E-32 T 18-10-2018 IPR002634 BolA protein CH53_2859 3654fc2dd1ed461ade173c8170c46825 104 SUPERFAMILY SSF82657 2 88 1.16E-29 T 18-10-2018 IPR036065 BolA-like superfamily CH53_313 a04e8d32a67068bddff3f689580f402b 414 Pfam PF07476 Methylaspartate ammonia-lyase C-terminus 162 409 1.9E-116 T 18-10-2018 IPR022662 Methylaspartate ammonia-lyase, C-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 CH53_313 a04e8d32a67068bddff3f689580f402b 414 Gene3D G3DSA:3.30.390.10 1 164 1.5E-72 T 18-10-2018 IPR029017 Enolase-like, N-terminal CH53_313 a04e8d32a67068bddff3f689580f402b 414 Gene3D G3DSA:3.20.20.120 165 413 1.7E-107 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CH53_313 a04e8d32a67068bddff3f689580f402b 414 PIRSF PIRSF017107 1 413 1.1E-223 T 18-10-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 CH53_313 a04e8d32a67068bddff3f689580f402b 414 SUPERFAMILY SSF51604 164 411 3.8E-77 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CH53_313 a04e8d32a67068bddff3f689580f402b 414 Pfam PF05034 Methylaspartate ammonia-lyase N-terminus 1 159 1.9E-71 T 18-10-2018 IPR022665 Methylaspartate ammonia-lyase, N-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 CH53_313 a04e8d32a67068bddff3f689580f402b 414 TIGRFAM TIGR01502 B_methylAsp_ase: methylaspartate ammonia-lyase 2 411 4.4E-163 T 18-10-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 CH53_313 a04e8d32a67068bddff3f689580f402b 414 SUPERFAMILY SSF54826 1 159 1.14E-57 T 18-10-2018 CH53_3064 991d84e8ad5579a6f5c440d107041709 631 Gene3D G3DSA:3.40.710.10 249 619 3.2E-95 T 18-10-2018 CH53_3064 991d84e8ad5579a6f5c440d107041709 631 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 607 4.4E-87 T 18-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CH53_3064 991d84e8ad5579a6f5c440d107041709 631 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 3.9E-45 T 18-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CH53_3064 991d84e8ad5579a6f5c440d107041709 631 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 614 52.749 T 18-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_3064 991d84e8ad5579a6f5c440d107041709 631 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 610 4.8E-237 T 18-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_3064 991d84e8ad5579a6f5c440d107041709 631 SUPERFAMILY SSF56519 57 254 1.44E-52 T 18-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 CH53_3064 991d84e8ad5579a6f5c440d107041709 631 Gene3D G3DSA:3.90.1310.10 65 248 7.8E-50 T 18-10-2018 CH53_3064 991d84e8ad5579a6f5c440d107041709 631 Gene3D G3DSA:3.30.1390.30 86 161 7.8E-50 T 18-10-2018 CH53_3064 991d84e8ad5579a6f5c440d107041709 631 SUPERFAMILY SSF56601 255 610 3.59E-92 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CH53_2587 c284e23a6c33245b0c60fd41755d5de0 231 Gene3D G3DSA:3.20.20.10 1 231 6.2E-83 T 18-10-2018 IPR029066 PLP-binding barrel CH53_2587 c284e23a6c33245b0c60fd41755d5de0 231 Pfam PF01168 Alanine racemase, N-terminal domain 7 230 1.1E-27 T 18-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_2587 c284e23a6c33245b0c60fd41755d5de0 231 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 18-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CH53_2587 c284e23a6c33245b0c60fd41755d5de0 231 PIRSF PIRSF004848 1 231 3.0E-75 T 18-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CH53_2587 c284e23a6c33245b0c60fd41755d5de0 231 SUPERFAMILY SSF51419 1 228 2.22E-80 T 18-10-2018 IPR029066 PLP-binding barrel CH53_2587 c284e23a6c33245b0c60fd41755d5de0 231 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 33.122 T 18-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CH53_2587 c284e23a6c33245b0c60fd41755d5de0 231 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 1.3E-89 T 18-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CH53_3030 d21eef8e8a15ba029680cbcd16e3ac14 260 SUPERFAMILY SSF51735 5 221 6.2E-55 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3030 d21eef8e8a15ba029680cbcd16e3ac14 260 Pfam PF00106 short chain dehydrogenase 6 192 4.0E-46 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3030 d21eef8e8a15ba029680cbcd16e3ac14 260 Gene3D G3DSA:3.40.50.720 2 260 2.1E-69 T 18-10-2018 CH53_3030 d21eef8e8a15ba029680cbcd16e3ac14 260 PIRSF PIRSF000126 1 260 1.4E-69 T 18-10-2018 CH53_3030 d21eef8e8a15ba029680cbcd16e3ac14 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 8.3E-22 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3030 d21eef8e8a15ba029680cbcd16e3ac14 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.3E-22 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3030 d21eef8e8a15ba029680cbcd16e3ac14 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 8.3E-22 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3030 d21eef8e8a15ba029680cbcd16e3ac14 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 8.3E-22 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3030 d21eef8e8a15ba029680cbcd16e3ac14 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 8.3E-22 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3030 d21eef8e8a15ba029680cbcd16e3ac14 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.0E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3030 d21eef8e8a15ba029680cbcd16e3ac14 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.0E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3030 d21eef8e8a15ba029680cbcd16e3ac14 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.0E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 Gene3D G3DSA:3.30.450.20 152 266 1.8E-19 T 18-10-2018 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 Pfam PF00072 Response regulator receiver domain 527 638 7.2E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 SUPERFAMILY SSF47226 661 773 8.24E-31 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 PIRSF PIRSF003182 1 778 0.0 T 18-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 SMART SM00091 155 221 4.9E-8 T 18-10-2018 IPR000014 PAS domain CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 SUPERFAMILY SSF55874 336 505 1.18E-39 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 Gene3D G3DSA:1.20.120.160 656 778 1.6E-31 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 SUPERFAMILY SSF52172 525 663 1.15E-30 T 18-10-2018 IPR011006 CheY-like superfamily CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 4.3E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 4.3E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 4.3E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 4.3E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 Pfam PF01627 Hpt domain 686 769 8.5E-14 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 SMART SM00073 675 772 1.0E-16 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 Gene3D G3DSA:3.30.565.10 348 509 1.6E-41 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 SMART SM00387 394 507 1.7E-35 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 Gene3D G3DSA:1.10.287.130 267 345 2.5E-21 T 18-10-2018 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 SUPERFAMILY SSF47384 269 347 9.61E-17 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 6.3E-14 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 SMART SM00448 525 638 3.1E-28 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 Gene3D G3DSA:3.40.50.2300 510 648 7.3E-33 T 18-10-2018 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 Gene3D G3DSA:1.10.287.970 1 89 5.2E-38 T 18-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 SUPERFAMILY SSF55785 143 267 1.92E-21 T 18-10-2018 IPR035965 PAS domain superfamily CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 505 2.7E-29 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 276 1.0E-15 T 18-10-2018 IPR000014 PAS domain CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 Pfam PF00989 PAS fold 157 266 2.6E-17 T 18-10-2018 IPR013767 PAS fold GO:0006355 CH53_2271 1d5933093712a5f2584b4f996ee4a3ed 778 SMART SM00388 282 347 4.8E-18 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_2088 57ea9f203157a241ecc9698ec486e723 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.7E-14 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CH53_2088 57ea9f203157a241ecc9698ec486e723 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.2E-16 T 18-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CH53_2088 57ea9f203157a241ecc9698ec486e723 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 18-10-2018 IPR031157 Tr-type G domain, conserved site CH53_2088 57ea9f203157a241ecc9698ec486e723 394 Gene3D G3DSA:3.40.50.300 1 203 6.2E-71 T 18-10-2018 CH53_2088 57ea9f203157a241ecc9698ec486e723 394 SUPERFAMILY SSF50447 205 301 2.16E-30 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CH53_2088 57ea9f203157a241ecc9698ec486e723 394 Gene3D G3DSA:2.40.30.10 338 393 2.8E-28 T 18-10-2018 CH53_2088 57ea9f203157a241ecc9698ec486e723 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.7E-24 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_2088 57ea9f203157a241ecc9698ec486e723 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.7E-24 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_2088 57ea9f203157a241ecc9698ec486e723 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.7E-24 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_2088 57ea9f203157a241ecc9698ec486e723 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.7E-24 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_2088 57ea9f203157a241ecc9698ec486e723 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.7E-24 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_2088 57ea9f203157a241ecc9698ec486e723 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.12 T 18-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CH53_2088 57ea9f203157a241ecc9698ec486e723 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.9E-33 T 18-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CH53_2088 57ea9f203157a241ecc9698ec486e723 394 SUPERFAMILY SSF52540 6 219 1.39E-60 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2088 57ea9f203157a241ecc9698ec486e723 394 SUPERFAMILY SSF50465 298 393 4.03E-35 T 18-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CH53_2088 57ea9f203157a241ecc9698ec486e723 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 7.1E-59 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_2088 57ea9f203157a241ecc9698ec486e723 394 Gene3D G3DSA:2.40.30.10 206 334 8.7E-52 T 18-10-2018 CH53_2088 57ea9f203157a241ecc9698ec486e723 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 2.4E-236 T 18-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CH53_4025 977bafd0974fbeabf545a05353497e08 463 Gene3D G3DSA:3.40.50.1220 287 463 1.9E-86 T 18-10-2018 CH53_4025 977bafd0974fbeabf545a05353497e08 463 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 461 2.1E-202 T 18-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CH53_4025 977bafd0974fbeabf545a05353497e08 463 SUPERFAMILY SSF52467 290 463 5.72E-77 T 18-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH53_4025 977bafd0974fbeabf545a05353497e08 463 PIRSF PIRSF000204 1 463 5.7E-238 T 18-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 CH53_3691 d349e4912d7623e41e213176077b5f62 543 Gene3D G3DSA:3.30.565.10 385 532 1.3E-27 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3691 d349e4912d7623e41e213176077b5f62 543 Pfam PF17203 Single cache domain 3 43 178 1.0E-21 T 18-10-2018 IPR033463 Single cache domain 3 CH53_3691 d349e4912d7623e41e213176077b5f62 543 SMART SM00387 429 537 1.5E-19 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3691 d349e4912d7623e41e213176077b5f62 543 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 432 535 2.5E-16 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3691 d349e4912d7623e41e213176077b5f62 543 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 334 383 4.6E-11 T 18-10-2018 IPR039506 SpoOB, alpha-helical domain CH53_3691 d349e4912d7623e41e213176077b5f62 543 SUPERFAMILY SSF55890 339 415 1.11E-15 T 18-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 CH53_3691 d349e4912d7623e41e213176077b5f62 543 Pfam PF00989 PAS fold 222 322 8.0E-8 T 18-10-2018 IPR013767 PAS fold GO:0006355 CH53_3691 d349e4912d7623e41e213176077b5f62 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 482 2.6E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3691 d349e4912d7623e41e213176077b5f62 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 2.6E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3691 d349e4912d7623e41e213176077b5f62 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 2.6E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3691 d349e4912d7623e41e213176077b5f62 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 496 2.6E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3691 d349e4912d7623e41e213176077b5f62 543 Gene3D G3DSA:3.30.450.20 207 324 7.7E-24 T 18-10-2018 CH53_3691 d349e4912d7623e41e213176077b5f62 543 SUPERFAMILY SSF55785 220 321 1.71E-6 T 18-10-2018 IPR035965 PAS domain superfamily CH53_3691 d349e4912d7623e41e213176077b5f62 543 SUPERFAMILY SSF55874 407 534 1.44E-26 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3691 d349e4912d7623e41e213176077b5f62 543 SUPERFAMILY SSF103190 45 177 6.67E-38 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CH53_3691 d349e4912d7623e41e213176077b5f62 543 Gene3D G3DSA:3.30.450.20 40 180 2.4E-40 T 18-10-2018 CH53_64 9a5f6da94a207cf9b8c782caddb71b79 381 Pfam PF02595 Glycerate kinase family 3 373 1.9E-143 T 18-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CH53_64 9a5f6da94a207cf9b8c782caddb71b79 381 Gene3D G3DSA:3.40.50.10350 1 362 2.6E-137 T 18-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold CH53_64 9a5f6da94a207cf9b8c782caddb71b79 381 Gene3D G3DSA:3.90.1510.10 42 276 2.6E-137 T 18-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 CH53_64 9a5f6da94a207cf9b8c782caddb71b79 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 5.2E-159 T 18-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CH53_64 9a5f6da94a207cf9b8c782caddb71b79 381 SUPERFAMILY SSF110738 1 375 3.27E-133 T 18-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 CH53_64 9a5f6da94a207cf9b8c782caddb71b79 381 PIRSF PIRSF006078 1 378 3.7E-136 T 18-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CH53_3756 dba4868517f5a30a0617016a1f8ccb03 363 SUPERFAMILY SSF81271 279 359 9.16E-36 T 18-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CH53_3756 dba4868517f5a30a0617016a1f8ccb03 363 Gene3D G3DSA:3.40.50.300 4 278 5.2E-153 T 18-10-2018 CH53_3756 dba4868517f5a30a0617016a1f8ccb03 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.3E-39 T 18-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 CH53_3756 dba4868517f5a30a0617016a1f8ccb03 363 Gene3D G3DSA:1.10.150.300 120 200 5.2E-153 T 18-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 CH53_3756 dba4868517f5a30a0617016a1f8ccb03 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.3E-174 T 18-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CH53_3756 dba4868517f5a30a0617016a1f8ccb03 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 2.0E-21 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_3756 dba4868517f5a30a0617016a1f8ccb03 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_3756 dba4868517f5a30a0617016a1f8ccb03 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_3756 dba4868517f5a30a0617016a1f8ccb03 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_3756 dba4868517f5a30a0617016a1f8ccb03 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_3756 dba4868517f5a30a0617016a1f8ccb03 363 Gene3D G3DSA:3.10.20.30 48 362 5.2E-153 T 18-10-2018 IPR012675 Beta-grasp domain superfamily CH53_3756 dba4868517f5a30a0617016a1f8ccb03 363 SUPERFAMILY SSF52540 3 301 1.4E-84 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3756 dba4868517f5a30a0617016a1f8ccb03 363 PIRSF PIRSF006641 1 363 3.1E-157 T 18-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CH53_3756 dba4868517f5a30a0617016a1f8ccb03 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.541 T 18-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CH53_1683 7ef4a75ad52aa7b253d130264e457adb 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 201 1.3E-40 T 18-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_1683 7ef4a75ad52aa7b253d130264e457adb 206 Gene3D G3DSA:2.40.500.20 94 206 1.2E-50 T 18-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_1683 7ef4a75ad52aa7b253d130264e457adb 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 8.3E-32 T 18-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_1683 7ef4a75ad52aa7b253d130264e457adb 206 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.7E-27 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_1683 7ef4a75ad52aa7b253d130264e457adb 206 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.7E-27 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_1683 7ef4a75ad52aa7b253d130264e457adb 206 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.7E-27 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_1683 7ef4a75ad52aa7b253d130264e457adb 206 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 2.7E-27 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_1683 7ef4a75ad52aa7b253d130264e457adb 206 PRINTS PR01703 Manganese superoxide dismutase signature 166 178 2.7E-27 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_1683 7ef4a75ad52aa7b253d130264e457adb 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 168 175 - T 18-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_1683 7ef4a75ad52aa7b253d130264e457adb 206 SUPERFAMILY SSF46609 1 90 4.84E-36 T 18-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_1683 7ef4a75ad52aa7b253d130264e457adb 206 SUPERFAMILY SSF54719 95 205 3.14E-46 T 18-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_1683 7ef4a75ad52aa7b253d130264e457adb 206 Gene3D G3DSA:1.10.287.990 20 90 1.7E-31 T 18-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_1683 7ef4a75ad52aa7b253d130264e457adb 206 PIRSF PIRSF000349 1 206 1.9E-79 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_3621 a6cfe190a6647fa74bc168211f5e4327 610 Pfam PF02151 UvrB/uvrC motif 205 237 5.0E-9 T 18-10-2018 IPR001943 UVR domain GO:0005515 CH53_3621 a6cfe190a6647fa74bc168211f5e4327 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 542 6.6E-45 T 18-10-2018 IPR001162 UvrC family homology region CH53_3621 a6cfe190a6647fa74bc168211f5e4327 610 Gene3D G3DSA:3.40.1440.10 5 102 2.4E-32 T 18-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CH53_3621 a6cfe190a6647fa74bc168211f5e4327 610 SUPERFAMILY SSF46600 191 243 2.09E-12 T 18-10-2018 IPR036876 UVR domain superfamily CH53_3621 a6cfe190a6647fa74bc168211f5e4327 610 SUPERFAMILY SSF47781 521 609 6.04E-18 T 18-10-2018 IPR010994 RuvA domain 2-like CH53_3621 a6cfe190a6647fa74bc168211f5e4327 610 Gene3D G3DSA:3.30.420.340 377 552 3.8E-46 T 18-10-2018 IPR038476 UvrC homology region 2 superfamily CH53_3621 a6cfe190a6647fa74bc168211f5e4327 610 SMART SM00465 17 98 9.3E-23 T 18-10-2018 IPR000305 GIY-YIG endonuclease CH53_3621 a6cfe190a6647fa74bc168211f5e4327 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 2.9E-6 T 18-10-2018 CH53_3621 a6cfe190a6647fa74bc168211f5e4327 610 SMART SM00278 588 607 11.0 T 18-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CH53_3621 a6cfe190a6647fa74bc168211f5e4327 610 SMART SM00278 556 575 92.0 T 18-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CH53_3621 a6cfe190a6647fa74bc168211f5e4327 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 29.83 T 18-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 CH53_3621 a6cfe190a6647fa74bc168211f5e4327 610 SUPERFAMILY SSF82771 17 100 7.45E-25 T 18-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CH53_3621 a6cfe190a6647fa74bc168211f5e4327 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 6.6E-13 T 18-10-2018 IPR000305 GIY-YIG endonuclease CH53_3621 a6cfe190a6647fa74bc168211f5e4327 610 Gene3D G3DSA:1.10.150.20 555 610 1.5E-23 T 18-10-2018 CH53_3621 a6cfe190a6647fa74bc168211f5e4327 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 8 589 1.4E-228 T 18-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 CH53_1140 5f5305c0486a82e9ca056ef16e990ef0 639 Pfam PF00158 Sigma-54 interaction domain 327 486 6.0E-38 T 18-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CH53_1140 5f5305c0486a82e9ca056ef16e990ef0 639 Gene3D G3DSA:3.30.450.20 209 312 5.2E-21 T 18-10-2018 CH53_1140 5f5305c0486a82e9ca056ef16e990ef0 639 SUPERFAMILY SSF46689 532 626 1.4E-9 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1140 5f5305c0486a82e9ca056ef16e990ef0 639 SUPERFAMILY SSF52540 328 563 7.55E-47 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1140 5f5305c0486a82e9ca056ef16e990ef0 639 Gene3D G3DSA:1.10.8.60 492 566 6.1E-18 T 18-10-2018 CH53_1140 5f5305c0486a82e9ca056ef16e990ef0 639 Gene3D G3DSA:3.40.50.300 313 491 1.0E-45 T 18-10-2018 CH53_1140 5f5305c0486a82e9ca056ef16e990ef0 639 Gene3D G3DSA:1.10.10.60 583 626 2.3E-10 T 18-10-2018 CH53_1140 5f5305c0486a82e9ca056ef16e990ef0 639 Pfam PF00989 PAS fold 200 300 2.2E-11 T 18-10-2018 IPR013767 PAS fold GO:0006355 CH53_1140 5f5305c0486a82e9ca056ef16e990ef0 639 Pfam PF02954 Bacterial regulatory protein, Fis family 584 622 4.3E-9 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_1140 5f5305c0486a82e9ca056ef16e990ef0 639 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 347 360 - T 18-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH53_1140 5f5305c0486a82e9ca056ef16e990ef0 639 Gene3D G3DSA:3.30.450.40 1 186 8.7E-52 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_1140 5f5305c0486a82e9ca056ef16e990ef0 639 SMART SM00091 199 265 7.5E-6 T 18-10-2018 IPR000014 PAS domain CH53_1140 5f5305c0486a82e9ca056ef16e990ef0 639 SUPERFAMILY SSF55785 195 298 1.92E-8 T 18-10-2018 IPR035965 PAS domain superfamily CH53_3960 e5e2d66169423cbbeeafbd3ac38708e8 359 Gene3D G3DSA:1.10.441.10 118 268 7.5E-132 T 18-10-2018 CH53_3960 e5e2d66169423cbbeeafbd3ac38708e8 359 Pfam PF01238 Phosphomannose isomerase type I 1 323 1.6E-90 T 18-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CH53_3960 e5e2d66169423cbbeeafbd3ac38708e8 359 Gene3D G3DSA:2.60.120.10 1 243 7.5E-132 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_3960 e5e2d66169423cbbeeafbd3ac38708e8 359 SUPERFAMILY SSF51182 2 343 4.02E-96 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_3960 e5e2d66169423cbbeeafbd3ac38708e8 359 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 94 102 - T 18-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CH53_3960 e5e2d66169423cbbeeafbd3ac38708e8 359 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 223 248 - T 18-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CH53_3960 e5e2d66169423cbbeeafbd3ac38708e8 359 PIRSF PIRSF001480 1 358 2.6E-101 T 18-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CH53_3960 e5e2d66169423cbbeeafbd3ac38708e8 359 PRINTS PR00714 Phosphomannose isomerase type I signature 49 70 9.5E-61 T 18-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CH53_3960 e5e2d66169423cbbeeafbd3ac38708e8 359 PRINTS PR00714 Phosphomannose isomerase type I signature 242 261 9.5E-61 T 18-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CH53_3960 e5e2d66169423cbbeeafbd3ac38708e8 359 PRINTS PR00714 Phosphomannose isomerase type I signature 94 117 9.5E-61 T 18-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CH53_3960 e5e2d66169423cbbeeafbd3ac38708e8 359 PRINTS PR00714 Phosphomannose isomerase type I signature 204 223 9.5E-61 T 18-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CH53_3960 e5e2d66169423cbbeeafbd3ac38708e8 359 PRINTS PR00714 Phosphomannose isomerase type I signature 223 242 9.5E-61 T 18-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CH53_3960 e5e2d66169423cbbeeafbd3ac38708e8 359 PRINTS PR00714 Phosphomannose isomerase type I signature 188 203 9.5E-61 T 18-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CH53_3960 e5e2d66169423cbbeeafbd3ac38708e8 359 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 1 349 7.9E-108 T 18-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CH53_3960 e5e2d66169423cbbeeafbd3ac38708e8 359 Gene3D G3DSA:2.60.120.10 269 349 7.5E-132 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_344 9d6eef8a8abb5f231d87d4e7b115907d 168 Pfam PF03974 Ecotin 36 158 3.9E-49 T 18-10-2018 IPR005658 Proteinase inhibitor I11, ecotin CH53_344 9d6eef8a8abb5f231d87d4e7b115907d 168 PIRSF PIRSF006865 1 168 1.5E-64 T 18-10-2018 IPR005658 Proteinase inhibitor I11, ecotin CH53_344 9d6eef8a8abb5f231d87d4e7b115907d 168 Hamap MF_00706 Ecotin [eco]. 4 168 39.396 T 18-10-2018 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria CH53_344 9d6eef8a8abb5f231d87d4e7b115907d 168 Gene3D G3DSA:2.60.40.550 22 168 8.4E-61 T 18-10-2018 CH53_344 9d6eef8a8abb5f231d87d4e7b115907d 168 SUPERFAMILY SSF49772 32 166 1.28E-53 T 18-10-2018 IPR036198 Ecotin superfamily CH53_1769 cefef396f3f1b57905a8208cb3385f6a 460 SUPERFAMILY SSF52540 77 348 4.11E-90 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1769 cefef396f3f1b57905a8208cb3385f6a 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 2.8E-21 T 18-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_1769 cefef396f3f1b57905a8208cb3385f6a 460 SUPERFAMILY SSF50615 1 75 4.19E-25 T 18-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_1769 cefef396f3f1b57905a8208cb3385f6a 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 56.772 T 18-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CH53_1769 cefef396f3f1b57905a8208cb3385f6a 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 2.0E-262 T 18-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CH53_1769 cefef396f3f1b57905a8208cb3385f6a 460 SMART SM00382 142 405 1.2E-4 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1769 cefef396f3f1b57905a8208cb3385f6a 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 18-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_1769 cefef396f3f1b57905a8208cb3385f6a 460 Gene3D G3DSA:2.40.10.170 2 75 1.3E-30 T 18-10-2018 CH53_1769 cefef396f3f1b57905a8208cb3385f6a 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 3.8E-63 T 18-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_1769 cefef396f3f1b57905a8208cb3385f6a 460 Gene3D G3DSA:1.10.1140.10 345 460 4.4E-60 T 18-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_1769 cefef396f3f1b57905a8208cb3385f6a 460 SUPERFAMILY SSF47917 345 459 2.09E-55 T 18-10-2018 CH53_1769 cefef396f3f1b57905a8208cb3385f6a 460 Gene3D G3DSA:3.40.50.300 76 344 8.2E-113 T 18-10-2018 CH53_1300 53f9a3e2793b815f01eaf5a9f1d9c7c6 115 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 10 112 0.001 T 18-10-2018 IPR010749 Protein of unknown function DUF1323 CH53_1300 53f9a3e2793b815f01eaf5a9f1d9c7c6 115 SUPERFAMILY SSF46955 3 74 4.3E-23 T 18-10-2018 IPR009061 Putative DNA-binding domain superfamily CH53_1300 53f9a3e2793b815f01eaf5a9f1d9c7c6 115 Gene3D G3DSA:1.10.10.10 2 71 1.7E-26 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1300 53f9a3e2793b815f01eaf5a9f1d9c7c6 115 Pfam PF02316 Mu DNA-binding domain 9 63 1.6E-14 T 18-10-2018 IPR003314 Mu-type HTH domain GO:0003677 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 292 8.9E-24 T 18-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 SUPERFAMILY SSF47831 199 307 2.35E-26 T 18-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 174 728 1.6E-130 T 18-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 Gene3D G3DSA:3.30.450.40 1 161 3.7E-44 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 SUPERFAMILY SSF52009 291 411 1.83E-26 T 18-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 SUPERFAMILY SSF51621 418 713 6.28E-94 T 18-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 Pfam PF01590 GAF domain 16 149 2.3E-15 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 628 643 7.5E-25 T 18-10-2018 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 664 676 7.5E-25 T 18-10-2018 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 611 626 7.5E-25 T 18-10-2018 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 457 476 7.5E-25 T 18-10-2018 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 Gene3D G3DSA:1.10.274.10 188 311 8.6E-57 T 18-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 Gene3D G3DSA:3.20.20.60 398 739 7.5E-100 T 18-10-2018 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 417 705 2.2E-101 T 18-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 611 629 - T 18-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 SUPERFAMILY SSF55781 3 157 2.84E-30 T 18-10-2018 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 Gene3D G3DSA:3.50.30.10 173 397 8.6E-57 T 18-10-2018 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 Pfam PF00391 PEP-utilising enzyme, mobile domain 318 389 6.4E-16 T 18-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 SMART SM00065 15 162 3.1E-27 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_2685 edca1ad9a1f03ea56d7a1e0bef6f35d8 746 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 349 360 - T 18-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CH53_2346 f22a21b8a5b069959e7389ff020fe9ff 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 207 8.6E-21 T 18-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CH53_2346 f22a21b8a5b069959e7389ff020fe9ff 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 1.0E-24 T 18-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 CH53_2346 f22a21b8a5b069959e7389ff020fe9ff 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 40.024 T 18-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 CH53_2346 f22a21b8a5b069959e7389ff020fe9ff 275 SUPERFAMILY SSF56300 16 273 3.52E-60 T 18-10-2018 CH53_2346 f22a21b8a5b069959e7389ff020fe9ff 275 Gene3D G3DSA:3.60.21.10 4 274 8.3E-70 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like CH53_1778 b128061234f3dade1c9e1ea5d2b67bae 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.709 T 18-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CH53_1778 b128061234f3dade1c9e1ea5d2b67bae 629 SMART SM01228 546 617 9.5E-45 T 18-10-2018 CH53_1778 b128061234f3dade1c9e1ea5d2b67bae 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 1.3E-294 T 18-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CH53_1778 b128061234f3dade1c9e1ea5d2b67bae 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 18-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CH53_1778 b128061234f3dade1c9e1ea5d2b67bae 629 Gene3D G3DSA:1.10.10.1800 459 550 2.9E-31 T 18-10-2018 CH53_1778 b128061234f3dade1c9e1ea5d2b67bae 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 18-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CH53_1778 b128061234f3dade1c9e1ea5d2b67bae 629 Pfam PF01134 Glucose inhibited division protein A 8 397 3.4E-169 T 18-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CH53_1778 b128061234f3dade1c9e1ea5d2b67bae 629 SUPERFAMILY SSF51905 6 261 9.88E-50 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1778 b128061234f3dade1c9e1ea5d2b67bae 629 Gene3D G3DSA:1.10.150.570 570 622 4.3E-23 T 18-10-2018 CH53_1778 b128061234f3dade1c9e1ea5d2b67bae 629 Gene3D G3DSA:3.50.50.60 294 458 1.6E-55 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1778 b128061234f3dade1c9e1ea5d2b67bae 629 Gene3D G3DSA:3.50.50.60 2 244 3.2E-91 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1778 b128061234f3dade1c9e1ea5d2b67bae 629 Pfam PF13932 GidA associated domain 403 616 1.7E-76 T 18-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 CH53_1785 0e74879d2cb674b015c2a8c37751414c 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.661 T 18-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup CH53_1785 0e74879d2cb674b015c2a8c37751414c 622 Pfam PF02705 K+ potassium transporter 14 544 3.0E-206 T 18-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CH53_1785 0e74879d2cb674b015c2a8c37751414c 622 TIGRFAM TIGR00794 kup: potassium uptake protein 97 550 8.0E-183 T 18-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CH53_1557 314e6087c65da9223b435ad1bb07e9c6 450 SMART SM00387 332 440 5.3E-29 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_1557 314e6087c65da9223b435ad1bb07e9c6 450 SUPERFAMILY SSF55874 293 441 4.06E-32 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1557 314e6087c65da9223b435ad1bb07e9c6 450 Gene3D G3DSA:1.10.287.130 178 288 7.3E-21 T 18-10-2018 CH53_1557 314e6087c65da9223b435ad1bb07e9c6 450 SUPERFAMILY SSF47384 217 291 8.63E-11 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_1557 314e6087c65da9223b435ad1bb07e9c6 450 Gene3D G3DSA:3.30.565.10 294 445 2.3E-38 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1557 314e6087c65da9223b435ad1bb07e9c6 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 1.2E-9 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_1557 314e6087c65da9223b435ad1bb07e9c6 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 9.6E-13 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1557 314e6087c65da9223b435ad1bb07e9c6 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 9.6E-13 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1557 314e6087c65da9223b435ad1bb07e9c6 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 9.6E-13 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1557 314e6087c65da9223b435ad1bb07e9c6 450 SMART SM00388 233 293 2.8E-11 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_1557 314e6087c65da9223b435ad1bb07e9c6 450 SMART SM00304 180 232 1.4E-5 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_1557 314e6087c65da9223b435ad1bb07e9c6 450 Pfam PF00672 HAMP domain 182 225 1.2E-7 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_1557 314e6087c65da9223b435ad1bb07e9c6 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 439 9.2E-20 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_2962 73501753bbef06fed09c8e669ff8ccad 206 Gene3D G3DSA:1.10.357.10 72 201 2.1E-27 T 18-10-2018 CH53_2962 73501753bbef06fed09c8e669ff8ccad 206 SUPERFAMILY SSF46689 3 73 1.08E-11 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_2962 73501753bbef06fed09c8e669ff8ccad 206 SUPERFAMILY SSF48498 85 197 1.68E-24 T 18-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH53_2962 73501753bbef06fed09c8e669ff8ccad 206 Gene3D G3DSA:1.10.10.60 1 70 1.5E-24 T 18-10-2018 CH53_2962 73501753bbef06fed09c8e669ff8ccad 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 63 8.3E-9 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_4256 3ce4e2dc1cb6ad08739048145e8d9b2a 493 SUPERFAMILY SSF100950 7 219 7.99E-58 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_4256 3ce4e2dc1cb6ad08739048145e8d9b2a 493 Gene3D G3DSA:3.40.1080.10 4 171 1.3E-14 T 18-10-2018 CH53_4256 3ce4e2dc1cb6ad08739048145e8d9b2a 493 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 7 490 6.4E-220 T 18-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 CH53_4256 3ce4e2dc1cb6ad08739048145e8d9b2a 493 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 317 461 4.3E-42 T 18-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CH53_4256 3ce4e2dc1cb6ad08739048145e8d9b2a 493 SUPERFAMILY SSF100950 227 490 5.86E-68 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_4256 3ce4e2dc1cb6ad08739048145e8d9b2a 493 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 8 213 4.9E-58 T 18-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 CH53_4256 3ce4e2dc1cb6ad08739048145e8d9b2a 493 Gene3D G3DSA:3.40.1080.20 334 473 9.6E-37 T 18-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily CH53_919 02984cac6aa143fb2525bfe08f4f0045 446 Gene3D G3DSA:3.40.50.620 155 372 1.7E-28 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_919 02984cac6aa143fb2525bfe08f4f0045 446 SUPERFAMILY SSF52402 157 372 3.98E-7 T 18-10-2018 CH53_919 02984cac6aa143fb2525bfe08f4f0045 446 Pfam PF06508 Queuosine biosynthesis protein QueC 286 359 7.0E-5 T 18-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CH53_3767 5f51d372e3118b1038e49ceb36713f31 269 Pfam PF13371 Tetratricopeptide repeat 187 258 1.4E-25 T 18-10-2018 CH53_3767 5f51d372e3118b1038e49ceb36713f31 269 SUPERFAMILY SSF48452 190 258 1.92E-5 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_3767 5f51d372e3118b1038e49ceb36713f31 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 4.9E-43 T 18-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CH53_1076 f72580f90dc1d795c29e4764472d397d 377 Gene3D G3DSA:2.10.230.10 145 205 7.1E-39 T 18-10-2018 CH53_1076 f72580f90dc1d795c29e4764472d397d 377 Pfam PF00684 DnaJ central domain 145 205 2.9E-15 T 18-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CH53_1076 f72580f90dc1d795c29e4764472d397d 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 18-10-2018 IPR018253 DnaJ domain, conserved site CH53_1076 f72580f90dc1d795c29e4764472d397d 377 SUPERFAMILY SSF49493 113 265 7.33E-23 T 18-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CH53_1076 f72580f90dc1d795c29e4764472d397d 377 SUPERFAMILY SSF49493 257 342 5.23E-22 T 18-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CH53_1076 f72580f90dc1d795c29e4764472d397d 377 SUPERFAMILY SSF46565 1 107 2.88E-36 T 18-10-2018 IPR036869 Chaperone J-domain superfamily CH53_1076 f72580f90dc1d795c29e4764472d397d 377 Gene3D G3DSA:1.10.287.110 1 113 1.3E-37 T 18-10-2018 IPR036869 Chaperone J-domain superfamily CH53_1076 f72580f90dc1d795c29e4764472d397d 377 Gene3D G3DSA:2.60.260.20 115 247 7.1E-39 T 18-10-2018 CH53_1076 f72580f90dc1d795c29e4764472d397d 377 Pfam PF00226 DnaJ domain 5 67 9.4E-27 T 18-10-2018 IPR001623 DnaJ domain CH53_1076 f72580f90dc1d795c29e4764472d397d 377 Pfam PF01556 DnaJ C terminal domain 119 331 3.9E-46 T 18-10-2018 IPR002939 Chaperone DnaJ, C-terminal CH53_1076 f72580f90dc1d795c29e4764472d397d 377 SMART SM00271 4 62 3.8E-28 T 18-10-2018 IPR001623 DnaJ domain CH53_1076 f72580f90dc1d795c29e4764472d397d 377 SUPERFAMILY SSF57938 132 209 1.44E-23 T 18-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CH53_1076 f72580f90dc1d795c29e4764472d397d 377 Gene3D G3DSA:2.60.260.20 252 331 2.8E-29 T 18-10-2018 CH53_1076 f72580f90dc1d795c29e4764472d397d 377 PRINTS PR00625 DnaJ domain signature 7 25 6.9E-32 T 18-10-2018 IPR001623 DnaJ domain CH53_1076 f72580f90dc1d795c29e4764472d397d 377 PRINTS PR00625 DnaJ domain signature 25 40 6.9E-32 T 18-10-2018 IPR001623 DnaJ domain CH53_1076 f72580f90dc1d795c29e4764472d397d 377 PRINTS PR00625 DnaJ domain signature 42 62 6.9E-32 T 18-10-2018 IPR001623 DnaJ domain CH53_1076 f72580f90dc1d795c29e4764472d397d 377 PRINTS PR00625 DnaJ domain signature 62 81 6.9E-32 T 18-10-2018 IPR001623 DnaJ domain CH53_1076 f72580f90dc1d795c29e4764472d397d 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 371 42.424 T 18-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CH53_1076 f72580f90dc1d795c29e4764472d397d 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 3.7E-141 T 18-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CH53_613 2bfb69ed6000d7519dbb4f7df090423d 321 SUPERFAMILY SSF54631 261 318 6.71E-7 T 18-10-2018 CH53_613 2bfb69ed6000d7519dbb4f7df090423d 321 SUPERFAMILY SSF53697 7 256 7.79E-55 T 18-10-2018 CH53_613 2bfb69ed6000d7519dbb4f7df090423d 321 SMART SM00116 208 256 0.088 T 18-10-2018 IPR000644 CBS domain CH53_613 2bfb69ed6000d7519dbb4f7df090423d 321 SMART SM00116 272 320 2.3 T 18-10-2018 IPR000644 CBS domain CH53_613 2bfb69ed6000d7519dbb4f7df090423d 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 43 311 2.2E-113 T 18-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CH53_613 2bfb69ed6000d7519dbb4f7df090423d 321 Pfam PF00571 CBS domain 199 256 1.1E-6 T 18-10-2018 IPR000644 CBS domain CH53_613 2bfb69ed6000d7519dbb4f7df090423d 321 Pfam PF00571 CBS domain 275 315 1.3E-4 T 18-10-2018 IPR000644 CBS domain CH53_613 2bfb69ed6000d7519dbb4f7df090423d 321 PIRSF PIRSF004692 1 321 3.4E-118 T 18-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CH53_613 2bfb69ed6000d7519dbb4f7df090423d 321 Pfam PF01380 SIS domain 38 169 2.5E-31 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_613 2bfb69ed6000d7519dbb4f7df090423d 321 Gene3D G3DSA:3.40.50.10490 3 193 5.6E-59 T 18-10-2018 CH53_613 2bfb69ed6000d7519dbb4f7df090423d 321 Gene3D G3DSA:3.10.580.10 194 318 5.0E-32 T 18-10-2018 CH53_1903 d61169c268c302fabdaa8bd4c2ac5c3b 342 SUPERFAMILY SSF47413 8 67 8.16E-15 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_1903 d61169c268c302fabdaa8bd4c2ac5c3b 342 SUPERFAMILY SSF53822 68 340 3.08E-92 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_1903 d61169c268c302fabdaa8bd4c2ac5c3b 342 Gene3D G3DSA:3.40.50.2300 69 314 5.3E-84 T 18-10-2018 CH53_1903 d61169c268c302fabdaa8bd4c2ac5c3b 342 SMART SM00354 9 79 2.5E-27 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_1903 d61169c268c302fabdaa8bd4c2ac5c3b 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 18-10-2018 CH53_1903 d61169c268c302fabdaa8bd4c2ac5c3b 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 55 1.6E-17 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_1903 d61169c268c302fabdaa8bd4c2ac5c3b 342 Gene3D G3DSA:3.40.50.2300 168 297 5.3E-84 T 18-10-2018 CH53_1903 d61169c268c302fabdaa8bd4c2ac5c3b 342 Gene3D G3DSA:1.10.260.40 1 67 5.7E-24 T 18-10-2018 CH53_1903 d61169c268c302fabdaa8bd4c2ac5c3b 342 Pfam PF13377 Periplasmic binding protein-like domain 176 337 6.3E-43 T 18-10-2018 CH53_1 cf750574eafbe4c0bc4bf117da95ac62 212 Gene3D G3DSA:3.40.50.300 1 209 1.7E-62 T 18-10-2018 CH53_1 cf750574eafbe4c0bc4bf117da95ac62 212 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 18-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CH53_1 cf750574eafbe4c0bc4bf117da95ac62 212 SUPERFAMILY SSF52540 1 206 1.41E-53 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1 cf750574eafbe4c0bc4bf117da95ac62 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 28.106 T 18-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CH53_1 cf750574eafbe4c0bc4bf117da95ac62 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 3.9E-63 T 18-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CH53_1 cf750574eafbe4c0bc4bf117da95ac62 212 Pfam PF02223 Thymidylate kinase 8 198 1.5E-60 T 18-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CH53_678 95d2eba1f2482ee384cabceeefdc62fe 241 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 22.761 T 18-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CH53_678 95d2eba1f2482ee384cabceeefdc62fe 241 Gene3D G3DSA:2.40.50.140 1 78 1.1E-32 T 18-10-2018 CH53_678 95d2eba1f2482ee384cabceeefdc62fe 241 SUPERFAMILY SSF50249 4 75 2.57E-14 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_678 95d2eba1f2482ee384cabceeefdc62fe 241 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 1.9E-37 T 18-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CH53_678 95d2eba1f2482ee384cabceeefdc62fe 241 Gene3D G3DSA:1.20.1440.120 79 236 4.1E-55 T 18-10-2018 CH53_678 95d2eba1f2482ee384cabceeefdc62fe 241 Pfam PF02565 Recombination protein O C terminal 83 226 2.5E-23 T 18-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CH53_678 95d2eba1f2482ee384cabceeefdc62fe 241 Pfam PF11967 Recombination protein O N terminal 4 76 2.0E-22 T 18-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal CH53_678 95d2eba1f2482ee384cabceeefdc62fe 241 SUPERFAMILY SSF57863 86 173 2.3E-9 T 18-10-2018 IPR037278 ARFGAP/RecO-like zinc finger CH53_1043 4343d16e351a7d03cd00b2fb8e1d2fe5 810 SUPERFAMILY SSF51998 7 809 1.71E-222 T 18-10-2018 CH53_1043 4343d16e351a7d03cd00b2fb8e1d2fe5 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 18-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CH53_1043 4343d16e351a7d03cd00b2fb8e1d2fe5 810 Gene3D G3DSA:3.20.70.20 10 810 1.5E-270 T 18-10-2018 CH53_1043 4343d16e351a7d03cd00b2fb8e1d2fe5 810 Pfam PF01228 Glycine radical 688 791 7.6E-29 T 18-10-2018 IPR001150 Glycine radical domain GO:0003824 CH53_1043 4343d16e351a7d03cd00b2fb8e1d2fe5 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 8 810 0.0 T 18-10-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CH53_1043 4343d16e351a7d03cd00b2fb8e1d2fe5 810 Pfam PF02901 Pyruvate formate lyase-like 10 671 1.1E-207 T 18-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CH53_4080 6782d2322b0ffad49df070ea3f8ade46 217 SUPERFAMILY SSF50475 20 217 1.68E-66 T 18-10-2018 CH53_4080 6782d2322b0ffad49df070ea3f8ade46 217 Gene3D G3DSA:2.30.110.10 19 217 2.4E-76 T 18-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CH53_4080 6782d2322b0ffad49df070ea3f8ade46 217 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 121 6.2E-23 T 18-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CH53_4080 6782d2322b0ffad49df070ea3f8ade46 217 PIRSF PIRSF000190 1 217 1.1E-81 T 18-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CH53_4080 6782d2322b0ffad49df070ea3f8ade46 217 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 177 217 1.1E-18 T 18-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CH53_4080 6782d2322b0ffad49df070ea3f8ade46 217 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 187 200 - T 18-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CH53_4080 6782d2322b0ffad49df070ea3f8ade46 217 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 15 217 38.182 T 18-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CH53_4080 6782d2322b0ffad49df070ea3f8ade46 217 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 4 217 3.8E-94 T 18-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CH53_691 e8147e4240ff33a0715510e2c77b6ad4 218 Pfam PF00023 Ankyrin repeat 143 174 0.027 T 18-10-2018 IPR002110 Ankyrin repeat GO:0005515 CH53_691 e8147e4240ff33a0715510e2c77b6ad4 218 SMART SM00248 110 139 510.0 T 18-10-2018 IPR002110 Ankyrin repeat GO:0005515 CH53_691 e8147e4240ff33a0715510e2c77b6ad4 218 SMART SM00248 143 172 0.022 T 18-10-2018 IPR002110 Ankyrin repeat GO:0005515 CH53_691 e8147e4240ff33a0715510e2c77b6ad4 218 SMART SM00248 43 72 260.0 T 18-10-2018 IPR002110 Ankyrin repeat GO:0005515 CH53_691 e8147e4240ff33a0715510e2c77b6ad4 218 SMART SM00248 76 105 73.0 T 18-10-2018 IPR002110 Ankyrin repeat GO:0005515 CH53_691 e8147e4240ff33a0715510e2c77b6ad4 218 SUPERFAMILY SSF48403 15 202 1.19E-34 T 18-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CH53_691 e8147e4240ff33a0715510e2c77b6ad4 218 Pfam PF12796 Ankyrin repeats (3 copies) 49 141 1.2E-7 T 18-10-2018 IPR020683 Ankyrin repeat-containing domain CH53_691 e8147e4240ff33a0715510e2c77b6ad4 218 Gene3D G3DSA:1.25.40.20 14 211 7.3E-30 T 18-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CH53_186 cc1b3db7df76628cade802837eb75258 306 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 11 282 2.2E-43 T 18-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 CH53_186 cc1b3db7df76628cade802837eb75258 306 Pfam PF04072 Leucine carboxyl methyltransferase 16 196 3.6E-32 T 18-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 CH53_186 cc1b3db7df76628cade802837eb75258 306 Gene3D G3DSA:3.40.50.150 3 303 1.1E-47 T 18-10-2018 CH53_186 cc1b3db7df76628cade802837eb75258 306 SUPERFAMILY SSF53335 9 292 5.07E-49 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_3310 82a835b11e6f9429ef0b89d5dead88a0 402 Gene3D G3DSA:3.40.50.300 30 242 1.1E-40 T 18-10-2018 CH53_3310 82a835b11e6f9429ef0b89d5dead88a0 402 SMART SM00382 50 231 2.2E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3310 82a835b11e6f9429ef0b89d5dead88a0 402 Pfam PF00005 ABC transporter 41 173 2.1E-19 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3310 82a835b11e6f9429ef0b89d5dead88a0 402 SUPERFAMILY SSF52540 33 230 3.59E-45 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3310 82a835b11e6f9429ef0b89d5dead88a0 402 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3310 82a835b11e6f9429ef0b89d5dead88a0 402 Gene3D G3DSA:2.70.50.60 243 370 3.3E-10 T 18-10-2018 CH53_3310 82a835b11e6f9429ef0b89d5dead88a0 402 Pfam PF14524 Wzt C-terminal domain 264 393 1.1E-16 T 18-10-2018 IPR029439 Wzt, C-terminal CH53_3220 b90b1965fb4ceeb24e2e7727b026d94d 358 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 42 351 9.3E-130 T 18-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC CH53_3220 b90b1965fb4ceeb24e2e7727b026d94d 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 340 1.4E-40 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_266 b099c34663125f62554e8172ff8f5d0d 235 SUPERFAMILY SSF55174 1 55 2.36E-11 T 18-10-2018 CH53_266 b099c34663125f62554e8172ff8f5d0d 235 Pfam PF01479 S4 domain 1 46 6.0E-8 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_266 b099c34663125f62554e8172ff8f5d0d 235 Gene3D G3DSA:3.30.70.1560 128 209 4.9E-61 T 18-10-2018 CH53_266 b099c34663125f62554e8172ff8f5d0d 235 SMART SM00363 1 69 1.7E-7 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_266 b099c34663125f62554e8172ff8f5d0d 235 Gene3D G3DSA:3.10.290.10 1 62 5.5E-21 T 18-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CH53_266 b099c34663125f62554e8172ff8f5d0d 235 Pfam PF00849 RNA pseudouridylate synthase 62 192 3.3E-19 T 18-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_266 b099c34663125f62554e8172ff8f5d0d 235 SUPERFAMILY SSF55120 61 227 4.0E-48 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_266 b099c34663125f62554e8172ff8f5d0d 235 Gene3D G3DSA:3.30.70.580 63 227 4.9E-61 T 18-10-2018 CH53_266 b099c34663125f62554e8172ff8f5d0d 235 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 18-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CH53_266 b099c34663125f62554e8172ff8f5d0d 235 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 1.2E-58 T 18-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CH53_1111 32ec14010f803faadabc0acc37c316f5 461 SUPERFAMILY SSF54211 259 459 2.35E-42 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_1111 32ec14010f803faadabc0acc37c316f5 461 Gene3D G3DSA:3.30.230.10 307 461 2.2E-21 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH53_1111 32ec14010f803faadabc0acc37c316f5 461 PRINTS PR01874 DNA repair protein radA signature 11 35 6.2E-94 T 18-10-2018 CH53_1111 32ec14010f803faadabc0acc37c316f5 461 PRINTS PR01874 DNA repair protein radA signature 252 278 6.2E-94 T 18-10-2018 CH53_1111 32ec14010f803faadabc0acc37c316f5 461 PRINTS PR01874 DNA repair protein radA signature 87 115 6.2E-94 T 18-10-2018 CH53_1111 32ec14010f803faadabc0acc37c316f5 461 PRINTS PR01874 DNA repair protein radA signature 326 349 6.2E-94 T 18-10-2018 CH53_1111 32ec14010f803faadabc0acc37c316f5 461 PRINTS PR01874 DNA repair protein radA signature 128 145 6.2E-94 T 18-10-2018 CH53_1111 32ec14010f803faadabc0acc37c316f5 461 PRINTS PR01874 DNA repair protein radA signature 178 202 6.2E-94 T 18-10-2018 CH53_1111 32ec14010f803faadabc0acc37c316f5 461 PRINTS PR01874 DNA repair protein radA signature 217 245 6.2E-94 T 18-10-2018 CH53_1111 32ec14010f803faadabc0acc37c316f5 461 Pfam PF13541 Subunit ChlI of Mg-chelatase 349 434 3.7E-9 T 18-10-2018 CH53_1111 32ec14010f803faadabc0acc37c316f5 461 Pfam PF13481 AAA domain 89 226 2.2E-13 T 18-10-2018 CH53_1111 32ec14010f803faadabc0acc37c316f5 461 SUPERFAMILY SSF52540 72 291 3.69E-48 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1111 32ec14010f803faadabc0acc37c316f5 461 SMART SM00382 95 249 8.9E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1111 32ec14010f803faadabc0acc37c316f5 461 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 455 8.4E-231 T 18-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CH53_1111 32ec14010f803faadabc0acc37c316f5 461 Hamap MF_01498 DNA repair protein RadA [radA]. 22 459 42.855 T 18-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CH53_1111 32ec14010f803faadabc0acc37c316f5 461 Gene3D G3DSA:3.40.50.300 71 283 1.8E-38 T 18-10-2018 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 SUPERFAMILY SSF100920 384 535 4.58E-50 T 18-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 Gene3D G3DSA:1.20.1270.10 520 615 1.7E-29 T 18-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 Gene3D G3DSA:3.30.420.40 194 361 1.8E-110 T 18-10-2018 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 18-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 SUPERFAMILY SSF53067 20 196 9.58E-51 T 18-10-2018 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 Gene3D G3DSA:2.60.34.10 389 518 1.7E-50 T 18-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 Gene3D G3DSA:3.30.420.40 23 374 1.8E-110 T 18-10-2018 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 1.1E-269 T 18-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 18-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 Pfam PF00012 Hsp70 protein 22 600 1.7E-195 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 18-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 SUPERFAMILY SSF100934 504 615 1.14E-37 T 18-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 PRINTS PR00301 70kDa heat shock protein signature 70 78 2.6E-54 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.6E-54 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.6E-54 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.6E-54 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 2.6E-54 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.6E-54 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.6E-54 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 2.6E-54 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.376 T 18-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 SUPERFAMILY SSF53067 200 377 5.12E-49 T 18-10-2018 CH53_642 9fa00622cd0a1727febba7e3abf3e2b0 616 Gene3D G3DSA:3.90.640.10 238 311 1.8E-110 T 18-10-2018 CH53_2775 147dd426bfe369f1e75e867206417320 210 SMART SM01007 8 196 2.2E-54 T 18-10-2018 IPR001303 Class II aldolase/adducin N-terminal CH53_2775 147dd426bfe369f1e75e867206417320 210 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 195 6.4E-43 T 18-10-2018 IPR001303 Class II aldolase/adducin N-terminal CH53_2775 147dd426bfe369f1e75e867206417320 210 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 204 122.39 T 18-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 CH53_2775 147dd426bfe369f1e75e867206417320 210 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 11 199 1.3E-73 T 18-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 CH53_2775 147dd426bfe369f1e75e867206417320 210 SUPERFAMILY SSF53639 4 200 6.28E-47 T 18-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CH53_2775 147dd426bfe369f1e75e867206417320 210 Gene3D G3DSA:3.40.225.10 2 199 2.5E-53 T 18-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CH53_1437 33f6f1803a7511b838ddeccc6491681c 210 Gene3D G3DSA:3.40.50.12740 3 208 9.5E-59 T 18-10-2018 CH53_1437 33f6f1803a7511b838ddeccc6491681c 210 Pfam PF00072 Response regulator receiver domain 6 116 2.3E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1437 33f6f1803a7511b838ddeccc6491681c 210 SUPERFAMILY SSF52172 2 132 2.56E-30 T 18-10-2018 IPR011006 CheY-like superfamily CH53_1437 33f6f1803a7511b838ddeccc6491681c 210 SUPERFAMILY SSF46894 143 208 1.22E-19 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_1437 33f6f1803a7511b838ddeccc6491681c 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 3.7E-19 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1437 33f6f1803a7511b838ddeccc6491681c 210 SMART SM00448 3 116 2.5E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1437 33f6f1803a7511b838ddeccc6491681c 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1437 33f6f1803a7511b838ddeccc6491681c 210 SMART SM00421 146 203 1.4E-20 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1437 33f6f1803a7511b838ddeccc6491681c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 3.0E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1437 33f6f1803a7511b838ddeccc6491681c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 3.0E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1437 33f6f1803a7511b838ddeccc6491681c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 3.0E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_462 18ec2ffbcad1bab4d927016aaf8bb504 221 Gene3D G3DSA:1.10.10.10 48 159 3.1E-24 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_462 18ec2ffbcad1bab4d927016aaf8bb504 221 SUPERFAMILY SSF46785 62 190 8.86E-23 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_462 18ec2ffbcad1bab4d927016aaf8bb504 221 Pfam PF03551 Transcriptional regulator PadR-like family 66 135 1.4E-19 T 18-10-2018 IPR005149 Transcription regulator PadR, N-terminal CH53_173 52a79dc7cf122117e5a242f28dbc57df 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 203 8.2E-74 T 18-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CH53_173 52a79dc7cf122117e5a242f28dbc57df 236 SUPERFAMILY SSF55729 3 229 2.01E-93 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_173 52a79dc7cf122117e5a242f28dbc57df 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 39 214 2.3E-76 T 18-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CH53_173 52a79dc7cf122117e5a242f28dbc57df 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 96.885 T 18-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CH53_173 52a79dc7cf122117e5a242f28dbc57df 236 Gene3D G3DSA:3.40.630.70 62 235 1.2E-69 T 18-10-2018 CH53_173 52a79dc7cf122117e5a242f28dbc57df 236 Gene3D G3DSA:2.30.210.20 2 61 3.6E-26 T 18-10-2018 CH53_525 961d2fc28a1e6da1e972298db7b15af7 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 3.5E-28 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_525 961d2fc28a1e6da1e972298db7b15af7 85 Gene3D G3DSA:3.30.1340.10 1 85 4.3E-35 T 18-10-2018 IPR035895 HPr-like superfamily CH53_525 961d2fc28a1e6da1e972298db7b15af7 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.5E-20 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_525 961d2fc28a1e6da1e972298db7b15af7 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.5E-20 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_525 961d2fc28a1e6da1e972298db7b15af7 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.5E-20 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_525 961d2fc28a1e6da1e972298db7b15af7 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 18-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CH53_525 961d2fc28a1e6da1e972298db7b15af7 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 18-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CH53_525 961d2fc28a1e6da1e972298db7b15af7 85 SUPERFAMILY SSF55594 1 82 2.88E-27 T 18-10-2018 IPR035895 HPr-like superfamily CH53_525 961d2fc28a1e6da1e972298db7b15af7 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 9.4E-31 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_2071 81d1f1aeba11c7b6ffb438a6fb996369 729 Gene3D G3DSA:3.40.50.720 314 496 7.9E-65 T 18-10-2018 CH53_2071 81d1f1aeba11c7b6ffb438a6fb996369 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 18-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CH53_2071 81d1f1aeba11c7b6ffb438a6fb996369 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 18-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CH53_2071 81d1f1aeba11c7b6ffb438a6fb996369 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 1.0E-59 T 18-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CH53_2071 81d1f1aeba11c7b6ffb438a6fb996369 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 52.47 T 18-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CH53_2071 81d1f1aeba11c7b6ffb438a6fb996369 729 SUPERFAMILY SSF51735 315 495 6.47E-56 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2071 81d1f1aeba11c7b6ffb438a6fb996369 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 205 2.7E-41 T 18-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CH53_2071 81d1f1aeba11c7b6ffb438a6fb996369 729 SUPERFAMILY SSF52096 2 303 2.93E-71 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CH53_2071 81d1f1aeba11c7b6ffb438a6fb996369 729 SUPERFAMILY SSF48179 621 714 4.0E-23 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_2071 81d1f1aeba11c7b6ffb438a6fb996369 729 Gene3D G3DSA:1.10.1040.50 497 709 1.2E-73 T 18-10-2018 CH53_2071 81d1f1aeba11c7b6ffb438a6fb996369 729 Gene3D G3DSA:3.90.226.10 1 311 3.4E-96 T 18-10-2018 CH53_2071 81d1f1aeba11c7b6ffb438a6fb996369 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 18-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CH53_2071 81d1f1aeba11c7b6ffb438a6fb996369 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 688 1.7E-4 T 18-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CH53_2071 81d1f1aeba11c7b6ffb438a6fb996369 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 3.4E-26 T 18-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CH53_2071 81d1f1aeba11c7b6ffb438a6fb996369 729 SUPERFAMILY SSF48179 495 613 1.02E-29 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_1369 52a70df740403d4859b06119c61ac4d4 107 SUPERFAMILY SSF54913 5 105 2.59E-35 T 18-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CH53_1369 52a70df740403d4859b06119c61ac4d4 107 Hamap MF_01160 Divalent-cation tolerance protein CutA [cutA]. 1 107 36.479 T 18-10-2018 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria GO:0005507|GO:0005737 CH53_1369 52a70df740403d4859b06119c61ac4d4 107 Pfam PF03091 CutA1 divalent ion tolerance protein 7 104 8.7E-34 T 18-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 CH53_1369 52a70df740403d4859b06119c61ac4d4 107 Gene3D G3DSA:3.30.70.120 1 106 7.1E-40 T 18-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CH53_471 68b69892f3dd21c9fb2d033864667646 386 PIRSF PIRSF001434 1 386 7.9E-137 T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CH53_471 68b69892f3dd21c9fb2d033864667646 386 Gene3D G3DSA:3.40.640.10 5 250 3.9E-81 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_471 68b69892f3dd21c9fb2d033864667646 386 Gene3D G3DSA:3.90.1150.10 251 386 1.7E-53 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_471 68b69892f3dd21c9fb2d033864667646 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 382 1.2E-138 T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CH53_471 68b69892f3dd21c9fb2d033864667646 386 SUPERFAMILY SSF53383 24 383 9.25E-108 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_1971 a824dec8b3ba8c868c073fea6540e8d4 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.3E-220 T 18-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CH53_1971 a824dec8b3ba8c868c073fea6540e8d4 419 SMART SM00959 5 47 8.6E-17 T 18-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CH53_1971 a824dec8b3ba8c868c073fea6540e8d4 419 Gene3D G3DSA:2.40.50.140 48 117 2.0E-35 T 18-10-2018 CH53_1971 a824dec8b3ba8c868c073fea6540e8d4 419 SMART SM00357 52 118 2.0E-18 T 18-10-2018 IPR011129 Cold shock domain GO:0003676 CH53_1971 a824dec8b3ba8c868c073fea6540e8d4 419 Gene3D G3DSA:1.10.720.10 1 47 4.6E-24 T 18-10-2018 CH53_1971 a824dec8b3ba8c868c073fea6540e8d4 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.8E-16 T 18-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CH53_1971 a824dec8b3ba8c868c073fea6540e8d4 419 SUPERFAMILY SSF52540 90 371 2.66E-68 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1971 a824dec8b3ba8c868c073fea6540e8d4 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.9E-22 T 18-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_1971 a824dec8b3ba8c868c073fea6540e8d4 419 SMART SM00382 170 355 2.0E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1971 a824dec8b3ba8c868c073fea6540e8d4 419 SUPERFAMILY SSF68912 1 46 6.67E-12 T 18-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily CH53_1971 a824dec8b3ba8c868c073fea6540e8d4 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 249.503 T 18-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CH53_1971 a824dec8b3ba8c868c073fea6540e8d4 419 SUPERFAMILY SSF50249 48 125 5.57E-30 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_1971 a824dec8b3ba8c868c073fea6540e8d4 419 Gene3D G3DSA:3.40.50.300 130 417 7.3E-134 T 18-10-2018 CH53_1971 a824dec8b3ba8c868c073fea6540e8d4 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 3.2E-32 T 18-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 CH53_3838 883127c787dd6c6fca08b8b6cdf63ae1 434 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 52.204 T 18-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 CH53_3838 883127c787dd6c6fca08b8b6cdf63ae1 434 Pfam PF01266 FAD dependent oxidoreductase 2 397 1.0E-73 T 18-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CH53_3838 883127c787dd6c6fca08b8b6cdf63ae1 434 Gene3D G3DSA:3.50.50.60 105 403 1.7E-51 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_3838 883127c787dd6c6fca08b8b6cdf63ae1 434 Gene3D G3DSA:3.50.50.60 1 77 2.0E-12 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_3838 883127c787dd6c6fca08b8b6cdf63ae1 434 SUPERFAMILY SSF51905 1 418 3.24E-54 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_3838 883127c787dd6c6fca08b8b6cdf63ae1 434 SUPERFAMILY SSF54373 269 359 3.4E-17 T 18-10-2018 CH53_3838 883127c787dd6c6fca08b8b6cdf63ae1 434 Gene3D G3DSA:3.30.9.10 134 361 1.7E-51 T 18-10-2018 CH53_1872 ace03c0eaaaf6904bc13766f83fdd5a1 515 Gene3D G3DSA:3.40.1450.10 79 313 1.3E-215 T 18-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_1872 ace03c0eaaaf6904bc13766f83fdd5a1 515 Pfam PF01676 Metalloenzyme superfamily 6 501 7.9E-82 T 18-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CH53_1872 ace03c0eaaaf6904bc13766f83fdd5a1 515 SUPERFAMILY SSF53649 5 511 4.32E-75 T 18-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CH53_1872 ace03c0eaaaf6904bc13766f83fdd5a1 515 SUPERFAMILY SSF64158 79 311 9.68E-86 T 18-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_1872 ace03c0eaaaf6904bc13766f83fdd5a1 515 Gene3D G3DSA:3.40.720.10 7 511 1.3E-215 T 18-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CH53_1872 ace03c0eaaaf6904bc13766f83fdd5a1 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 512 1.9E-239 T 18-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_1872 ace03c0eaaaf6904bc13766f83fdd5a1 515 PIRSF PIRSF001492 1 515 4.6E-205 T 18-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_1872 ace03c0eaaaf6904bc13766f83fdd5a1 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 513 49.939 T 18-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_1872 ace03c0eaaaf6904bc13766f83fdd5a1 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 85 300 7.0E-82 T 18-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_4253 1de178665ac6b4c853732ee1bdc27b1d 331 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 17 321 9.6E-120 T 18-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CH53_4253 1de178665ac6b4c853732ee1bdc27b1d 331 Pfam PF03308 ArgK protein 22 291 5.4E-111 T 18-10-2018 CH53_4253 1de178665ac6b4c853732ee1bdc27b1d 331 Gene3D G3DSA:1.20.5.170 1 50 2.8E-20 T 18-10-2018 CH53_4253 1de178665ac6b4c853732ee1bdc27b1d 331 Gene3D G3DSA:3.40.50.300 51 261 5.3E-80 T 18-10-2018 CH53_4253 1de178665ac6b4c853732ee1bdc27b1d 331 Gene3D G3DSA:1.10.287.130 263 324 2.0E-9 T 18-10-2018 CH53_4253 1de178665ac6b4c853732ee1bdc27b1d 331 SUPERFAMILY SSF52540 6 317 4.65E-87 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4253 1de178665ac6b4c853732ee1bdc27b1d 331 SMART SM00382 53 230 0.0074 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_719 e351b81417a161b215cd5037a0e568c9 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 126 18.48 T 18-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CH53_719 e351b81417a161b215cd5037a0e568c9 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 121 2.2E-20 T 18-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 Pfam PF01297 Zinc-uptake complex component A periplasmic 55 318 1.6E-80 T 18-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 Gene3D G3DSA:3.40.50.1980 209 322 2.3E-42 T 18-10-2018 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 Gene3D G3DSA:3.40.50.1980 51 208 2.9E-55 T 18-10-2018 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 SUPERFAMILY SSF53807 49 321 5.89E-93 T 18-10-2018 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 PRINTS PR00690 Adhesin family signature 83 96 2.9E-46 T 18-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 PRINTS PR00690 Adhesin family signature 52 70 2.9E-46 T 18-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 PRINTS PR00690 Adhesin family signature 207 228 2.9E-46 T 18-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 PRINTS PR00690 Adhesin family signature 260 278 2.9E-46 T 18-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 PRINTS PR00690 Adhesin family signature 286 305 2.9E-46 T 18-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 PRINTS PR00690 Adhesin family signature 96 113 2.9E-46 T 18-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 PRINTS PR00691 Adhesin B signature 278 296 3.4E-38 T 18-10-2018 IPR006129 Adhesin B GO:0007155 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 PRINTS PR00691 Adhesin B signature 52 73 3.4E-38 T 18-10-2018 IPR006129 Adhesin B GO:0007155 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 PRINTS PR00691 Adhesin B signature 96 115 3.4E-38 T 18-10-2018 IPR006129 Adhesin B GO:0007155 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 PRINTS PR00691 Adhesin B signature 77 95 3.4E-38 T 18-10-2018 IPR006129 Adhesin B GO:0007155 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 PRINTS PR00691 Adhesin B signature 207 224 3.4E-38 T 18-10-2018 IPR006129 Adhesin B GO:0007155 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 PRINTS PR00691 Adhesin B signature 233 251 3.4E-38 T 18-10-2018 IPR006129 Adhesin B GO:0007155 CH53_4247 b5a92f875107698d0d3bfa29074962c9 322 PRINTS PR00691 Adhesin B signature 256 273 3.4E-38 T 18-10-2018 IPR006129 Adhesin B GO:0007155 CH53_3765 11864aaa8d8476ad5323e760b15e92c2 276 Gene3D G3DSA:3.40.50.150 87 275 1.2E-59 T 18-10-2018 CH53_3765 11864aaa8d8476ad5323e760b15e92c2 276 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 270 1.5E-87 T 18-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CH53_3765 11864aaa8d8476ad5323e760b15e92c2 276 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 274 44.027 T 18-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CH53_3765 11864aaa8d8476ad5323e760b15e92c2 276 Gene3D G3DSA:1.10.8.10 1 84 1.8E-22 T 18-10-2018 CH53_3765 11864aaa8d8476ad5323e760b15e92c2 276 Pfam PF13847 Methyltransferase domain 111 249 4.7E-21 T 18-10-2018 IPR025714 Methyltransferase domain CH53_3765 11864aaa8d8476ad5323e760b15e92c2 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 179 185 - T 18-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CH53_3765 11864aaa8d8476ad5323e760b15e92c2 276 SUPERFAMILY SSF53335 3 272 2.47E-55 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_3765 11864aaa8d8476ad5323e760b15e92c2 276 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 274 4.9E-86 T 18-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CH53_2270 e4fd00c16eb0cb9e3b98acc0b2f4d9c2 307 SUPERFAMILY SSF102114 13 266 2.88E-45 T 18-10-2018 CH53_2270 e4fd00c16eb0cb9e3b98acc0b2f4d9c2 307 Gene3D G3DSA:3.80.30.20 42 272 1.4E-16 T 18-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CH53_2270 e4fd00c16eb0cb9e3b98acc0b2f4d9c2 307 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 299 3.8E-132 T 18-10-2018 IPR005911 Protein YhcC-like GO:0051536 CH53_2270 e4fd00c16eb0cb9e3b98acc0b2f4d9c2 307 SMART SM00729 23 247 1.2E-42 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CH53_2270 e4fd00c16eb0cb9e3b98acc0b2f4d9c2 307 Pfam PF16199 Radical_SAM C-terminal domain 208 283 9.5E-18 T 18-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 CH53_2270 e4fd00c16eb0cb9e3b98acc0b2f4d9c2 307 Pfam PF04055 Radical SAM superfamily 43 201 4.8E-18 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_982 993ffaff779cc9fef6f3f0287f5f06ba 219 SMART SM00947 30 192 5.3E-66 T 18-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CH53_982 993ffaff779cc9fef6f3f0287f5f06ba 219 Gene3D G3DSA:3.40.1050.10 1 218 1.6E-85 T 18-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CH53_982 993ffaff779cc9fef6f3f0287f5f06ba 219 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 18-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CH53_982 993ffaff779cc9fef6f3f0287f5f06ba 219 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 18-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CH53_982 993ffaff779cc9fef6f3f0287f5f06ba 219 SUPERFAMILY SSF53056 1 212 1.31E-73 T 18-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CH53_982 993ffaff779cc9fef6f3f0287f5f06ba 219 Pfam PF00484 Carbonic anhydrase 38 188 2.3E-50 T 18-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CH53_3445 db664dabac0d2b2778e2cae94dcf6988 528 SUPERFAMILY SSF55890 321 364 1.83E-7 T 18-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 CH53_3445 db664dabac0d2b2778e2cae94dcf6988 528 SUPERFAMILY SSF55874 394 525 1.7E-27 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3445 db664dabac0d2b2778e2cae94dcf6988 528 Gene3D G3DSA:3.30.565.10 369 526 2.8E-25 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3445 db664dabac0d2b2778e2cae94dcf6988 528 SUPERFAMILY SSF103190 35 163 3.45E-31 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CH53_3445 db664dabac0d2b2778e2cae94dcf6988 528 Gene3D G3DSA:3.30.450.20 196 310 1.3E-14 T 18-10-2018 CH53_3445 db664dabac0d2b2778e2cae94dcf6988 528 Gene3D G3DSA:3.30.450.20 30 161 9.6E-38 T 18-10-2018 CH53_3445 db664dabac0d2b2778e2cae94dcf6988 528 Pfam PF17203 Single cache domain 3 46 161 1.3E-16 T 18-10-2018 IPR033463 Single cache domain 3 CH53_3445 db664dabac0d2b2778e2cae94dcf6988 528 SMART SM00387 417 528 9.4E-25 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3445 db664dabac0d2b2778e2cae94dcf6988 528 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 527 1.3E-17 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3445 db664dabac0d2b2778e2cae94dcf6988 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 2.7E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3445 db664dabac0d2b2778e2cae94dcf6988 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 2.7E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3445 db664dabac0d2b2778e2cae94dcf6988 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 2.7E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3445 db664dabac0d2b2778e2cae94dcf6988 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 486 2.7E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3445 db664dabac0d2b2778e2cae94dcf6988 528 SMART SM00091 210 278 2.1E-5 T 18-10-2018 IPR000014 PAS domain CH53_3445 db664dabac0d2b2778e2cae94dcf6988 528 SUPERFAMILY SSF55785 212 302 2.93E-9 T 18-10-2018 IPR035965 PAS domain superfamily CH53_5 6921b6e3b114446f07f2df933b9c9d46 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 3.9E-37 T 18-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CH53_5 6921b6e3b114446f07f2df933b9c9d46 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.7E-16 T 18-10-2018 IPR009081 Phosphopantetheine binding ACP domain CH53_5 6921b6e3b114446f07f2df933b9c9d46 78 Gene3D G3DSA:1.10.1200.10 1 76 5.4E-29 T 18-10-2018 IPR036736 ACP-like superfamily CH53_5 6921b6e3b114446f07f2df933b9c9d46 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.174 T 18-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CH53_5 6921b6e3b114446f07f2df933b9c9d46 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 0.003 T 18-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CH53_5 6921b6e3b114446f07f2df933b9c9d46 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 18-10-2018 IPR006162 Phosphopantetheine attachment site CH53_5 6921b6e3b114446f07f2df933b9c9d46 78 SUPERFAMILY SSF47336 2 76 1.09E-23 T 18-10-2018 IPR036736 ACP-like superfamily CH53_2094 cfd3bc97958d7a2861c2e66d033ff798 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 7.7E-32 T 18-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2094 cfd3bc97958d7a2861c2e66d033ff798 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 49 5.7E-15 T 18-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2094 cfd3bc97958d7a2861c2e66d033ff798 122 SUPERFAMILY SSF48300 4 58 4.32E-15 T 18-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2094 cfd3bc97958d7a2861c2e66d033ff798 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 2.0E-27 T 18-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2094 cfd3bc97958d7a2861c2e66d033ff798 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 4.5E-48 T 18-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2094 cfd3bc97958d7a2861c2e66d033ff798 122 SUPERFAMILY SSF54736 51 122 1.05E-25 T 18-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CH53_2094 cfd3bc97958d7a2861c2e66d033ff798 122 Gene3D G3DSA:3.30.1390.10 52 122 8.2E-33 T 18-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CH53_2094 cfd3bc97958d7a2861c2e66d033ff798 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 122 25.266 T 18-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2094 cfd3bc97958d7a2861c2e66d033ff798 122 Gene3D G3DSA:1.20.5.710 3 51 1.5E-21 T 18-10-2018 CH53_3517 2547bd9f8a4e5939f527953e8c0aa0df 441 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 36 50 - T 18-10-2018 IPR033379 Histidine acid phosphatase active site CH53_3517 2547bd9f8a4e5939f527953e8c0aa0df 441 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 35 174 7.9E-10 T 18-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 CH53_3517 2547bd9f8a4e5939f527953e8c0aa0df 441 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 298 381 5.4E-6 T 18-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 CH53_3517 2547bd9f8a4e5939f527953e8c0aa0df 441 SUPERFAMILY SSF53254 31 438 8.07E-70 T 18-10-2018 IPR029033 Histidine phosphatase superfamily CH53_3517 2547bd9f8a4e5939f527953e8c0aa0df 441 Gene3D G3DSA:3.40.50.1240 162 287 1.1E-165 T 18-10-2018 IPR029033 Histidine phosphatase superfamily CH53_3517 2547bd9f8a4e5939f527953e8c0aa0df 441 Gene3D G3DSA:3.40.50.1240 35 428 1.1E-165 T 18-10-2018 IPR029033 Histidine phosphatase superfamily CH53_3238 be02706f776b20a0a7580315d26081ac 235 ProSitePatterns PS00221 MIP family signature. 60 68 - T 18-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 CH53_3238 be02706f776b20a0a7580315d26081ac 235 PRINTS PR00783 Major intrinsic protein family signature 2 21 1.0E-53 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_3238 be02706f776b20a0a7580315d26081ac 235 PRINTS PR00783 Major intrinsic protein family signature 165 187 1.0E-53 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_3238 be02706f776b20a0a7580315d26081ac 235 PRINTS PR00783 Major intrinsic protein family signature 135 153 1.0E-53 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_3238 be02706f776b20a0a7580315d26081ac 235 PRINTS PR00783 Major intrinsic protein family signature 42 66 1.0E-53 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_3238 be02706f776b20a0a7580315d26081ac 235 PRINTS PR00783 Major intrinsic protein family signature 79 98 1.0E-53 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_3238 be02706f776b20a0a7580315d26081ac 235 PRINTS PR00783 Major intrinsic protein family signature 204 224 1.0E-53 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_3238 be02706f776b20a0a7580315d26081ac 235 SUPERFAMILY SSF81338 1 227 1.13E-66 T 18-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CH53_3238 be02706f776b20a0a7580315d26081ac 235 Pfam PF00230 Major intrinsic protein 2 221 1.4E-47 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_3238 be02706f776b20a0a7580315d26081ac 235 Gene3D G3DSA:1.20.1080.10 1 227 1.8E-80 T 18-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CH53_3238 be02706f776b20a0a7580315d26081ac 235 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 221 1.0E-57 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_3238 be02706f776b20a0a7580315d26081ac 235 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 228 33.108 T 18-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 CH53_2505 11c30bd9263a4cd8d5627c1a24f9b0f7 247 SUPERFAMILY SSF75516 13 163 9.81E-36 T 18-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily CH53_2505 11c30bd9263a4cd8d5627c1a24f9b0f7 247 Gene3D G3DSA:3.30.450.80 3 170 5.2E-50 T 18-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily CH53_2505 11c30bd9263a4cd8d5627c1a24f9b0f7 247 SMART SM00421 179 236 5.9E-19 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2505 11c30bd9263a4cd8d5627c1a24f9b0f7 247 Gene3D G3DSA:1.10.10.10 176 243 1.8E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2505 11c30bd9263a4cd8d5627c1a24f9b0f7 247 Pfam PF03472 Autoinducer binding domain 13 157 6.2E-30 T 18-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CH53_2505 11c30bd9263a4cd8d5627c1a24f9b0f7 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 212 224 8.6E-11 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2505 11c30bd9263a4cd8d5627c1a24f9b0f7 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 212 8.6E-11 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2505 11c30bd9263a4cd8d5627c1a24f9b0f7 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 196 8.6E-11 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2505 11c30bd9263a4cd8d5627c1a24f9b0f7 247 Pfam PF00196 Bacterial regulatory proteins, luxR family 181 235 1.7E-15 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2505 11c30bd9263a4cd8d5627c1a24f9b0f7 247 SUPERFAMILY SSF46894 178 242 1.43E-16 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_2505 11c30bd9263a4cd8d5627c1a24f9b0f7 247 ProSitePatterns PS00622 LuxR-type HTH domain signature. 196 223 - T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3848 ead9a0400df62cbd19a976b5c762d17e 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 9 129 36.735 T 18-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CH53_3848 ead9a0400df62cbd19a976b5c762d17e 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 12 135 2.5E-59 T 18-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CH53_3848 ead9a0400df62cbd19a976b5c762d17e 137 Gene3D G3DSA:2.170.150.20 8 136 2.6E-59 T 18-10-2018 CH53_3848 ead9a0400df62cbd19a976b5c762d17e 137 SUPERFAMILY SSF51316 11 132 2.35E-56 T 18-10-2018 IPR011057 Mss4-like superfamily CH53_3848 ead9a0400df62cbd19a976b5c762d17e 137 Pfam PF01641 SelR domain 12 127 1.8E-52 T 18-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CH53_590 08ccdaf12132d70d783fa3ac79fb9036 560 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 291 552 3.5E-75 T 18-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CH53_590 08ccdaf12132d70d783fa3ac79fb9036 560 Gene3D G3DSA:1.10.3720.10 302 554 2.0E-31 T 18-10-2018 IPR035906 MetI-like superfamily CH53_590 08ccdaf12132d70d783fa3ac79fb9036 560 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 328 555 1.4E-19 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_590 08ccdaf12132d70d783fa3ac79fb9036 560 SUPERFAMILY SSF161098 274 543 1.27E-38 T 18-10-2018 IPR035906 MetI-like superfamily CH53_987 9793c22c6f1a7d8e9099d62f9fb55c94 264 Gene3D G3DSA:3.60.90.10 97 185 6.8E-6 T 18-10-2018 CH53_987 9793c22c6f1a7d8e9099d62f9fb55c94 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 175.836 T 18-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CH53_987 9793c22c6f1a7d8e9099d62f9fb55c94 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 1.2E-147 T 18-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CH53_987 9793c22c6f1a7d8e9099d62f9fb55c94 264 PIRSF PIRSF001356 1 263 3.9E-156 T 18-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CH53_987 9793c22c6f1a7d8e9099d62f9fb55c94 264 SUPERFAMILY SSF56276 43 173 9.02E-23 T 18-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CH53_987 9793c22c6f1a7d8e9099d62f9fb55c94 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 4.4E-29 T 18-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CH53_2667 e8cb24787973db8451aa1572ec348d15 217 SUPERFAMILY SSF46894 3 95 1.22E-17 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_2667 e8cb24787973db8451aa1572ec348d15 217 Pfam PF00486 Transcriptional regulatory protein, C terminal 23 95 9.8E-17 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_2667 e8cb24787973db8451aa1572ec348d15 217 SMART SM00862 22 95 8.4E-14 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_2667 e8cb24787973db8451aa1572ec348d15 217 Gene3D G3DSA:1.10.10.10 1 100 1.7E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2002 67583ee7598481a2d469bf9a25406eaa 407 Pfam PF06792 Uncharacterised protein family (UPF0261) 4 399 2.5E-158 T 18-10-2018 IPR008322 Uncharacterised protein family UPF0261 CH53_2002 67583ee7598481a2d469bf9a25406eaa 407 PIRSF PIRSF033271 1 403 1.1E-198 T 18-10-2018 IPR008322 Uncharacterised protein family UPF0261 CH53_2002 67583ee7598481a2d469bf9a25406eaa 407 Gene3D G3DSA:3.40.50.12030 183 402 3.1E-85 T 18-10-2018 CH53_2002 67583ee7598481a2d469bf9a25406eaa 407 Gene3D G3DSA:3.40.50.12020 2 175 1.4E-57 T 18-10-2018 CH53_2002 67583ee7598481a2d469bf9a25406eaa 407 Hamap MF_00677 UPF0261 protein . 2 402 53.001 T 18-10-2018 IPR008322 Uncharacterised protein family UPF0261 CH53_1749 2fb5105db48436b6fad3bc2695f198a0 245 Gene3D G3DSA:1.10.3720.10 7 241 1.9E-48 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1749 2fb5105db48436b6fad3bc2695f198a0 245 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 85 2.7E-17 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CH53_1749 2fb5105db48436b6fad3bc2695f198a0 245 SUPERFAMILY SSF161098 18 229 3.53E-40 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1749 2fb5105db48436b6fad3bc2695f198a0 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 228 1.0E-14 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_4263 490ae51ce73518a5e8654cafbe73e276 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 275 3.2E-15 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_4263 490ae51ce73518a5e8654cafbe73e276 296 SUPERFAMILY SSF160964 4 42 2.75E-5 T 18-10-2018 CH53_4263 490ae51ce73518a5e8654cafbe73e276 296 SUPERFAMILY SSF161098 50 273 7.46E-58 T 18-10-2018 IPR035906 MetI-like superfamily CH53_4263 490ae51ce73518a5e8654cafbe73e276 296 Gene3D G3DSA:1.10.3720.10 45 284 3.5E-66 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1127 e41dbbe84fd7a8457ccc4338e4ca9678 347 Pfam PF05175 Methyltransferase small domain 167 333 8.4E-58 T 18-10-2018 IPR007848 Methyltransferase small domain GO:0008168 CH53_1127 e41dbbe84fd7a8457ccc4338e4ca9678 347 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 1.0E-57 T 18-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 CH53_1127 e41dbbe84fd7a8457ccc4338e4ca9678 347 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 18-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CH53_1127 e41dbbe84fd7a8457ccc4338e4ca9678 347 Gene3D G3DSA:3.40.50.150 159 342 9.9E-46 T 18-10-2018 CH53_1127 e41dbbe84fd7a8457ccc4338e4ca9678 347 Gene3D G3DSA:3.40.50.150 1 158 9.5E-58 T 18-10-2018 CH53_1127 e41dbbe84fd7a8457ccc4338e4ca9678 347 SUPERFAMILY SSF53335 155 315 2.74E-27 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_1127 e41dbbe84fd7a8457ccc4338e4ca9678 347 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 45.195 T 18-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 CH53_1160 c7012002c4b12801bdf88032fdf197a4 519 Pfam PF00005 ABC transporter 282 432 4.5E-18 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1160 c7012002c4b12801bdf88032fdf197a4 519 SUPERFAMILY SSF52540 8 224 5.75E-56 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1160 c7012002c4b12801bdf88032fdf197a4 519 Gene3D G3DSA:3.40.50.300 278 505 1.6E-40 T 18-10-2018 CH53_1160 c7012002c4b12801bdf88032fdf197a4 519 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1160 c7012002c4b12801bdf88032fdf197a4 519 SMART SM00382 34 237 1.4E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1160 c7012002c4b12801bdf88032fdf197a4 519 SMART SM00382 289 481 4.6E-7 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1160 c7012002c4b12801bdf88032fdf197a4 519 Pfam PF00005 ABC transporter 25 167 6.5E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1160 c7012002c4b12801bdf88032fdf197a4 519 Gene3D G3DSA:3.40.50.300 6 233 1.2E-57 T 18-10-2018 CH53_1160 c7012002c4b12801bdf88032fdf197a4 519 SUPERFAMILY SSF52540 269 483 1.4E-44 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 Gene3D G3DSA:3.30.930.10 2 252 5.7E-123 T 18-10-2018 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 Gene3D G3DSA:2.40.30.130 461 552 1.1E-9 T 18-10-2018 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 Gene3D G3DSA:3.30.54.20 624 677 5.7E-52 T 18-10-2018 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 SUPERFAMILY SSF101353 256 465 1.44E-61 T 18-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 Gene3D G3DSA:3.10.310.40 764 872 1.2E-35 T 18-10-2018 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 SUPERFAMILY SSF50447 456 552 3.53E-18 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 18-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 9.0E-17 T 18-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 SUPERFAMILY SSF55186 552 710 3.79E-53 T 18-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 SMART SM00863 653 696 2.5E-20 T 18-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 Pfam PF02272 DHHA1 domain 733 871 1.1E-29 T 18-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 1.5E-33 T 18-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 1.5E-33 T 18-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.5E-33 T 18-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 1.5E-33 T 18-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 1.5E-33 T 18-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 Pfam PF01411 tRNA synthetases class II (A) 7 554 9.6E-234 T 18-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 Gene3D G3DSA:3.30.980.10 563 697 5.7E-52 T 18-10-2018 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 206.231 T 18-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CH53_821 dfb97320a10c00fd76b6f09943c16cca 875 SUPERFAMILY SSF55681 4 255 4.97E-108 T 18-10-2018 CH53_1323 d452129bc7560849dc2ec452e9ce04b2 150 SUPERFAMILY SSF55658 1 57 4.01E-19 T 18-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CH53_1323 d452129bc7560849dc2ec452e9ce04b2 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 2.9E-58 T 18-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1323 d452129bc7560849dc2ec452e9ce04b2 150 Gene3D G3DSA:3.40.5.10 1 50 5.1E-25 T 18-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1323 d452129bc7560849dc2ec452e9ce04b2 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 5.5E-22 T 18-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1323 d452129bc7560849dc2ec452e9ce04b2 150 Gene3D G3DSA:3.10.430.100 61 149 2.1E-30 T 18-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CH53_1323 d452129bc7560849dc2ec452e9ce04b2 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.162 T 18-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1323 d452129bc7560849dc2ec452e9ce04b2 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 18-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1323 d452129bc7560849dc2ec452e9ce04b2 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 2.5E-24 T 18-10-2018 IPR020069 Ribosomal protein L9, C-terminal CH53_1323 d452129bc7560849dc2ec452e9ce04b2 150 SUPERFAMILY SSF55653 61 149 7.85E-25 T 18-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CH53_2797 84a9dab2ffad628e000188a61a667ead 368 SUPERFAMILY SSF52440 3 139 1.34E-36 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CH53_2797 84a9dab2ffad628e000188a61a667ead 368 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 7.7E-76 T 18-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_2797 84a9dab2ffad628e000188a61a667ead 368 Gene3D G3DSA:3.30.470.20 129 353 4.9E-86 T 18-10-2018 CH53_2797 84a9dab2ffad628e000188a61a667ead 368 Gene3D G3DSA:3.40.50.20 1 128 3.0E-45 T 18-10-2018 CH53_2797 84a9dab2ffad628e000188a61a667ead 368 PIRSF PIRSF039102 1 359 1.4E-131 T 18-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_2797 84a9dab2ffad628e000188a61a667ead 368 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 1.9E-31 T 18-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_2797 84a9dab2ffad628e000188a61a667ead 368 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 42.274 T 18-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_2797 84a9dab2ffad628e000188a61a667ead 368 SUPERFAMILY SSF56059 140 357 3.36E-57 T 18-10-2018 CH53_2797 84a9dab2ffad628e000188a61a667ead 368 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 18-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_2797 84a9dab2ffad628e000188a61a667ead 368 Gene3D G3DSA:3.30.1490.20 155 224 4.9E-86 T 18-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CH53_2797 84a9dab2ffad628e000188a61a667ead 368 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 3.5E-113 T 18-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_2797 84a9dab2ffad628e000188a61a667ead 368 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 18-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_29 ec88cc0c76ddffc555f0c6c83eec23a6 194 Pfam PF00072 Response regulator receiver domain 4 113 4.1E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_29 ec88cc0c76ddffc555f0c6c83eec23a6 194 Gene3D G3DSA:1.10.10.10 128 190 1.3E-17 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_29 ec88cc0c76ddffc555f0c6c83eec23a6 194 SUPERFAMILY SSF52172 6 162 8.97E-29 T 18-10-2018 IPR011006 CheY-like superfamily CH53_29 ec88cc0c76ddffc555f0c6c83eec23a6 194 Gene3D G3DSA:3.40.50.2300 1 127 3.9E-33 T 18-10-2018 CH53_29 ec88cc0c76ddffc555f0c6c83eec23a6 194 SMART SM00421 133 190 7.8E-19 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_29 ec88cc0c76ddffc555f0c6c83eec23a6 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 166 1.1E-9 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_29 ec88cc0c76ddffc555f0c6c83eec23a6 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 178 1.1E-9 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_29 ec88cc0c76ddffc555f0c6c83eec23a6 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 136 150 1.1E-9 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_29 ec88cc0c76ddffc555f0c6c83eec23a6 194 Pfam PF00196 Bacterial regulatory proteins, luxR family 135 189 1.3E-17 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_29 ec88cc0c76ddffc555f0c6c83eec23a6 194 SMART SM00448 2 113 1.9E-20 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_396 35d8afb9b941aa520b1d5f6c12414718 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 2.6E-148 T 18-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CH53_356 d05c3ad39277866c61e2a27c2169d579 268 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 22 258 4.7E-79 T 18-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 CH53_356 d05c3ad39277866c61e2a27c2169d579 268 Gene3D G3DSA:3.40.50.1820 17 260 2.4E-55 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_356 d05c3ad39277866c61e2a27c2169d579 268 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 18 259 33.696 T 18-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 CH53_356 d05c3ad39277866c61e2a27c2169d579 268 SUPERFAMILY SSF53474 20 260 6.08E-40 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_356 d05c3ad39277866c61e2a27c2169d579 268 Pfam PF12697 Alpha/beta hydrolase family 24 252 3.5E-15 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_4027 b515d09c419f89ca36dea2d943739a55 317 Gene3D G3DSA:3.30.1660.10 22 91 6.0E-25 T 18-10-2018 IPR025543 Dodecin-like CH53_4027 b515d09c419f89ca36dea2d943739a55 317 PIRSF PIRSF014774 1 317 4.5E-184 T 18-10-2018 IPR025539 YdgH protein CH53_4027 b515d09c419f89ca36dea2d943739a55 317 SUPERFAMILY SSF159871 108 179 1.44E-17 T 18-10-2018 IPR036275 YdgH-like superfamily CH53_4027 b515d09c419f89ca36dea2d943739a55 317 SUPERFAMILY SSF159871 4 95 1.7E-22 T 18-10-2018 IPR036275 YdgH-like superfamily CH53_4027 b515d09c419f89ca36dea2d943739a55 317 SUPERFAMILY SSF159871 241 317 5.1E-19 T 18-10-2018 IPR036275 YdgH-like superfamily CH53_4027 b515d09c419f89ca36dea2d943739a55 317 Gene3D G3DSA:3.30.1660.10 107 176 2.7E-24 T 18-10-2018 IPR025543 Dodecin-like CH53_4027 b515d09c419f89ca36dea2d943739a55 317 Gene3D G3DSA:3.30.1660.10 245 317 5.3E-30 T 18-10-2018 IPR025543 Dodecin-like CH53_4027 b515d09c419f89ca36dea2d943739a55 317 Pfam PF07338 Protein of unknown function (DUF1471) 120 176 1.5E-19 T 18-10-2018 IPR010854 Domain of unknown function DUF1471 CH53_4027 b515d09c419f89ca36dea2d943739a55 317 Pfam PF07338 Protein of unknown function (DUF1471) 261 317 6.1E-21 T 18-10-2018 IPR010854 Domain of unknown function DUF1471 CH53_4027 b515d09c419f89ca36dea2d943739a55 317 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 3.5E-20 T 18-10-2018 IPR010854 Domain of unknown function DUF1471 CH53_2075 09c5a4348d29aed7295e6d0b0e520cc2 177 SUPERFAMILY SSF52218 1 156 1.14E-33 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_2075 09c5a4348d29aed7295e6d0b0e520cc2 177 Pfam PF12724 Flavodoxin domain 4 151 1.3E-54 T 18-10-2018 IPR026816 Flavodoxin domain CH53_2075 09c5a4348d29aed7295e6d0b0e520cc2 177 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 18-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CH53_2075 09c5a4348d29aed7295e6d0b0e520cc2 177 Gene3D G3DSA:3.40.50.360 3 110 9.0E-13 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_161 3bbc4e5d1f646712df846e06a92de66d 760 SUPERFAMILY SSF51998 4 758 3.36E-288 T 18-10-2018 CH53_161 3bbc4e5d1f646712df846e06a92de66d 760 Gene3D G3DSA:3.20.70.20 2 760 0.0 T 18-10-2018 CH53_161 3bbc4e5d1f646712df846e06a92de66d 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 18-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CH53_161 3bbc4e5d1f646712df846e06a92de66d 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 759 0.0 T 18-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CH53_161 3bbc4e5d1f646712df846e06a92de66d 760 PIRSF PIRSF000379 8 760 0.0 T 18-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CH53_161 3bbc4e5d1f646712df846e06a92de66d 760 Pfam PF02901 Pyruvate formate lyase-like 26 614 3.6E-204 T 18-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CH53_161 3bbc4e5d1f646712df846e06a92de66d 760 Pfam PF01228 Glycine radical 630 741 3.5E-43 T 18-10-2018 IPR001150 Glycine radical domain GO:0003824 CH53_2971 f55e215904241288a396eaecd72186f7 412 SUPERFAMILY SSF53474 138 409 1.37E-60 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2971 f55e215904241288a396eaecd72186f7 412 Pfam PF00561 alpha/beta hydrolase fold 165 396 1.3E-23 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_2971 f55e215904241288a396eaecd72186f7 412 Pfam PF12680 SnoaL-like domain 17 124 7.5E-14 T 18-10-2018 IPR037401 SnoaL-like domain CH53_2971 f55e215904241288a396eaecd72186f7 412 PRINTS PR00111 Alpha/beta hydrolase fold signature 190 205 1.9E-12 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_2971 f55e215904241288a396eaecd72186f7 412 PRINTS PR00111 Alpha/beta hydrolase fold signature 248 261 1.9E-12 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_2971 f55e215904241288a396eaecd72186f7 412 PRINTS PR00111 Alpha/beta hydrolase fold signature 355 369 1.9E-12 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_2971 f55e215904241288a396eaecd72186f7 412 PRINTS PR00111 Alpha/beta hydrolase fold signature 234 247 1.9E-12 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_2971 f55e215904241288a396eaecd72186f7 412 Gene3D G3DSA:3.40.50.1820 145 411 3.8E-56 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2971 f55e215904241288a396eaecd72186f7 412 PRINTS PR00412 Epoxide hydrolase signature 353 369 1.6E-6 T 18-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CH53_2971 f55e215904241288a396eaecd72186f7 412 PRINTS PR00412 Epoxide hydrolase signature 386 408 1.6E-6 T 18-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CH53_2971 f55e215904241288a396eaecd72186f7 412 PRINTS PR00412 Epoxide hydrolase signature 190 205 1.6E-6 T 18-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CH53_2971 f55e215904241288a396eaecd72186f7 412 PRINTS PR00412 Epoxide hydrolase signature 248 261 1.6E-6 T 18-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CH53_2971 f55e215904241288a396eaecd72186f7 412 Gene3D G3DSA:3.10.450.50 11 142 2.9E-27 T 18-10-2018 CH53_2971 f55e215904241288a396eaecd72186f7 412 SUPERFAMILY SSF54427 12 138 2.42E-24 T 18-10-2018 IPR032710 NTF2-like domain superfamily CH53_822 3888220ecc4a56371c3b10f6aa41c1cb 167 Gene3D G3DSA:1.10.10.10 1 70 6.9E-25 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_822 3888220ecc4a56371c3b10f6aa41c1cb 167 Gene3D G3DSA:1.10.10.10 71 115 5.2E-17 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_822 3888220ecc4a56371c3b10f6aa41c1cb 167 Gene3D G3DSA:1.10.10.10 117 167 3.2E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_822 3888220ecc4a56371c3b10f6aa41c1cb 167 Hamap MF_01114 Regulatory protein RecX [recX]. 2 167 14.843 T 18-10-2018 IPR003783 Regulatory protein RecX GO:0006282 CH53_822 3888220ecc4a56371c3b10f6aa41c1cb 167 Pfam PF02631 RecX family 51 163 1.3E-31 T 18-10-2018 IPR003783 Regulatory protein RecX GO:0006282 CH53_3267 6accdb4c438a0029fb4b09a6ca21d2a5 220 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 18-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CH53_3267 6accdb4c438a0029fb4b09a6ca21d2a5 220 Gene3D G3DSA:3.30.1130.10 85 220 5.1E-54 T 18-10-2018 CH53_3267 6accdb4c438a0029fb4b09a6ca21d2a5 220 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 18-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CH53_3267 6accdb4c438a0029fb4b09a6ca21d2a5 220 Gene3D G3DSA:1.10.286.10 1 84 1.6E-39 T 18-10-2018 CH53_3267 6accdb4c438a0029fb4b09a6ca21d2a5 220 Pfam PF01227 GTP cyclohydrolase I 38 216 3.1E-63 T 18-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CH53_3267 6accdb4c438a0029fb4b09a6ca21d2a5 220 SUPERFAMILY SSF55620 5 219 1.41E-74 T 18-10-2018 CH53_3267 6accdb4c438a0029fb4b09a6ca21d2a5 220 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.972 T 18-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CH53_3267 6accdb4c438a0029fb4b09a6ca21d2a5 220 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 218 4.3E-85 T 18-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CH53_2260 0db999c00c02493dfb9104f180077079 457 Gene3D G3DSA:2.30.42.10 267 367 1.9E-28 T 18-10-2018 CH53_2260 0db999c00c02493dfb9104f180077079 457 SUPERFAMILY SSF50494 40 265 2.26E-64 T 18-10-2018 IPR009003 Peptidase S1, PA clan CH53_2260 0db999c00c02493dfb9104f180077079 457 Gene3D G3DSA:2.30.42.10 368 457 9.0E-24 T 18-10-2018 CH53_2260 0db999c00c02493dfb9104f180077079 457 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 379 445 5.2E-11 T 18-10-2018 IPR001478 PDZ domain GO:0005515 CH53_2260 0db999c00c02493dfb9104f180077079 457 SUPERFAMILY SSF50156 227 352 3.55E-23 T 18-10-2018 IPR036034 PDZ superfamily GO:0005515 CH53_2260 0db999c00c02493dfb9104f180077079 457 SMART SM00228 269 351 2.8E-12 T 18-10-2018 IPR001478 PDZ domain GO:0005515 CH53_2260 0db999c00c02493dfb9104f180077079 457 SMART SM00228 371 449 7.0E-13 T 18-10-2018 IPR001478 PDZ domain GO:0005515 CH53_2260 0db999c00c02493dfb9104f180077079 457 PRINTS PR00834 HtrA/DegQ protease family signature 125 145 7.0E-58 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_2260 0db999c00c02493dfb9104f180077079 457 PRINTS PR00834 HtrA/DegQ protease family signature 104 116 7.0E-58 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_2260 0db999c00c02493dfb9104f180077079 457 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 7.0E-58 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_2260 0db999c00c02493dfb9104f180077079 457 PRINTS PR00834 HtrA/DegQ protease family signature 166 190 7.0E-58 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_2260 0db999c00c02493dfb9104f180077079 457 PRINTS PR00834 HtrA/DegQ protease family signature 201 218 7.0E-58 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_2260 0db999c00c02493dfb9104f180077079 457 PRINTS PR00834 HtrA/DegQ protease family signature 309 321 7.0E-58 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_2260 0db999c00c02493dfb9104f180077079 457 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 455 1.0E-158 T 18-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CH53_2260 0db999c00c02493dfb9104f180077079 457 Gene3D G3DSA:2.40.10.120 39 263 7.7E-86 T 18-10-2018 CH53_2260 0db999c00c02493dfb9104f180077079 457 Pfam PF13180 PDZ domain 280 360 1.2E-14 T 18-10-2018 IPR001478 PDZ domain GO:0005515 CH53_2260 0db999c00c02493dfb9104f180077079 457 SUPERFAMILY SSF50156 381 456 4.34E-15 T 18-10-2018 IPR036034 PDZ superfamily GO:0005515 CH53_2260 0db999c00c02493dfb9104f180077079 457 Pfam PF13365 Trypsin-like peptidase domain 94 230 1.0E-32 T 18-10-2018 CH53_3642 613b6fe89926a2caffb34524d06c4b5e 77 Gene3D G3DSA:1.20.58.250 1 76 2.3E-34 T 18-10-2018 IPR036745 DNA polymerase III-theta superfamily GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_3642 613b6fe89926a2caffb34524d06c4b5e 77 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 1 73 3.0E-22 T 18-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_3642 613b6fe89926a2caffb34524d06c4b5e 77 SUPERFAMILY SSF46575 1 73 6.54E-32 T 18-10-2018 CH53_3642 613b6fe89926a2caffb34524d06c4b5e 77 Pfam PF06440 DNA polymerase III, theta subunit 3 71 8.8E-37 T 18-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_4250 e67437803d8ff19ff849f17b58cf9b97 297 SUPERFAMILY SSF81345 5 266 1.96E-45 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_4250 e67437803d8ff19ff849f17b58cf9b97 297 Pfam PF00950 ABC 3 transport family 14 268 2.2E-97 T 18-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CH53_4250 e67437803d8ff19ff849f17b58cf9b97 297 Gene3D G3DSA:1.10.3470.10 41 272 2.4E-9 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 SMART SM00896 701 794 1.1E-44 T 18-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 SUPERFAMILY SSF54991 696 794 5.23E-30 T 18-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 SUPERFAMILY SSF50249 36 195 1.18E-50 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 2.2E-28 T 18-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 SUPERFAMILY SSF55681 467 690 8.45E-56 T 18-10-2018 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 Gene3D G3DSA:3.30.56.10 7 180 2.0E-73 T 18-10-2018 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 SMART SM00873 212 385 3.9E-99 T 18-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 1.9E-288 T 18-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 Gene3D G3DSA:2.40.50.140 39 154 2.0E-73 T 18-10-2018 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 Gene3D G3DSA:3.30.930.10 485 693 3.8E-63 T 18-10-2018 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 SMART SM00874 403 471 7.8E-30 T 18-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 Pfam PF01588 Putative tRNA binding domain 45 145 6.2E-27 T 18-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 SUPERFAMILY SSF56037 195 393 3.4E-78 T 18-10-2018 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 Gene3D G3DSA:3.50.40.10 198 395 2.9E-83 T 18-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 SUPERFAMILY SSF46955 404 475 3.85E-20 T 18-10-2018 IPR009061 Putative DNA-binding domain superfamily CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 48.146 T 18-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 Pfam PF03483 B3/4 domain 212 385 1.5E-71 T 18-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 4.5E-20 T 18-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 Gene3D G3DSA:3.30.70.380 702 795 1.0E-31 T 18-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 CH53_4142 aa9bf82a8f52c17e331be904e72478c6 795 Gene3D G3DSA:3.30.56.10 401 475 5.3E-28 T 18-10-2018 CH53_3905 0eb4c79ea82271436041443b46544681 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CH53_3905 0eb4c79ea82271436041443b46544681 253 SUPERFAMILY SSF51735 10 247 5.72E-62 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3905 0eb4c79ea82271436041443b46544681 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 6.5E-23 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3905 0eb4c79ea82271436041443b46544681 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 6.5E-23 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3905 0eb4c79ea82271436041443b46544681 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 6.5E-23 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3905 0eb4c79ea82271436041443b46544681 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 6.5E-23 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3905 0eb4c79ea82271436041443b46544681 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 6.5E-23 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3905 0eb4c79ea82271436041443b46544681 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 6.5E-23 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3905 0eb4c79ea82271436041443b46544681 253 Pfam PF00106 short chain dehydrogenase 14 210 7.4E-50 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3905 0eb4c79ea82271436041443b46544681 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 199 8.1E-4 T 18-10-2018 CH53_3905 0eb4c79ea82271436041443b46544681 253 Gene3D G3DSA:3.40.50.720 1 250 5.0E-73 T 18-10-2018 CH53_722 21f69bc1c8c06e76d621f8a9a0892275 114 Pfam PF06411 HdeA/HdeB family 11 99 5.7E-24 T 18-10-2018 IPR010486 HNS-dependent expression A/B CH53_722 21f69bc1c8c06e76d621f8a9a0892275 114 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 37 107 4.0E-34 T 18-10-2018 CH53_722 21f69bc1c8c06e76d621f8a9a0892275 114 Gene3D G3DSA:1.10.890.10 33 109 4.1E-35 T 18-10-2018 IPR038303 HNS-dependent expression A/B superfamily CH53_722 21f69bc1c8c06e76d621f8a9a0892275 114 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 1 106 28.523 T 18-10-2018 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 CH53_722 21f69bc1c8c06e76d621f8a9a0892275 114 SUPERFAMILY SSF47752 38 99 2.75E-5 T 18-10-2018 IPR036831 HNS-dependent expression A superfamily GO:0030288|GO:0071468 CH53_2720 86efd5e4260ffce7e0c35447aac28dc5 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.684 T 18-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2720 86efd5e4260ffce7e0c35447aac28dc5 241 Gene3D G3DSA:3.40.50.10490 8 219 1.4E-93 T 18-10-2018 CH53_2720 86efd5e4260ffce7e0c35447aac28dc5 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 18-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CH53_2720 86efd5e4260ffce7e0c35447aac28dc5 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 1.4E-108 T 18-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2720 86efd5e4260ffce7e0c35447aac28dc5 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.2E-37 T 18-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2720 86efd5e4260ffce7e0c35447aac28dc5 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.2E-37 T 18-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2720 86efd5e4260ffce7e0c35447aac28dc5 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.2E-37 T 18-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2720 86efd5e4260ffce7e0c35447aac28dc5 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.2E-37 T 18-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2720 86efd5e4260ffce7e0c35447aac28dc5 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.2E-37 T 18-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2720 86efd5e4260ffce7e0c35447aac28dc5 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.2E-37 T 18-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2720 86efd5e4260ffce7e0c35447aac28dc5 241 Pfam PF00318 Ribosomal protein S2 9 224 8.7E-94 T 18-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2720 86efd5e4260ffce7e0c35447aac28dc5 241 Gene3D G3DSA:1.10.287.610 103 150 1.4E-93 T 18-10-2018 CH53_2720 86efd5e4260ffce7e0c35447aac28dc5 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 18-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CH53_2720 86efd5e4260ffce7e0c35447aac28dc5 241 SUPERFAMILY SSF52313 6 236 1.31E-96 T 18-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CH53_2815 ec1b458b5d16fb951f2d3d65f564d528 174 Pfam PF01202 Shikimate kinase 11 167 1.0E-46 T 18-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CH53_2815 ec1b458b5d16fb951f2d3d65f564d528 174 SUPERFAMILY SSF52540 3 168 5.87E-28 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2815 ec1b458b5d16fb951f2d3d65f564d528 174 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 25.582 T 18-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CH53_2815 ec1b458b5d16fb951f2d3d65f564d528 174 PRINTS PR01100 Shikimate kinase family signature 95 112 2.0E-21 T 18-10-2018 CH53_2815 ec1b458b5d16fb951f2d3d65f564d528 174 PRINTS PR01100 Shikimate kinase family signature 5 20 2.0E-21 T 18-10-2018 CH53_2815 ec1b458b5d16fb951f2d3d65f564d528 174 PRINTS PR01100 Shikimate kinase family signature 57 65 2.0E-21 T 18-10-2018 CH53_2815 ec1b458b5d16fb951f2d3d65f564d528 174 PRINTS PR01100 Shikimate kinase family signature 74 83 2.0E-21 T 18-10-2018 CH53_2815 ec1b458b5d16fb951f2d3d65f564d528 174 PRINTS PR01100 Shikimate kinase family signature 29 42 2.0E-21 T 18-10-2018 CH53_2815 ec1b458b5d16fb951f2d3d65f564d528 174 Hamap MF_01269 Shikimate kinase 2 [aroL]. 1 173 44.119 T 18-10-2018 IPR027544 Shikimate kinase 2 GO:0004765|GO:0009073 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CH53_2815 ec1b458b5d16fb951f2d3d65f564d528 174 Gene3D G3DSA:3.40.50.300 1 169 3.7E-52 T 18-10-2018 CH53_2815 ec1b458b5d16fb951f2d3d65f564d528 174 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 18-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CH53_1348 5454955e5363eb85d027117b9b967a2e 181 Pfam PF00929 Exonuclease 9 170 1.0E-34 T 18-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CH53_1348 5454955e5363eb85d027117b9b967a2e 181 SMART SM00479 7 180 4.0E-21 T 18-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CH53_1348 5454955e5363eb85d027117b9b967a2e 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.986 T 18-10-2018 IPR022894 Oligoribonuclease GO:0000175 CH53_1348 5454955e5363eb85d027117b9b967a2e 181 Gene3D G3DSA:3.30.420.10 1 181 4.8E-71 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CH53_1348 5454955e5363eb85d027117b9b967a2e 181 SUPERFAMILY SSF53098 4 179 4.0E-48 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_1107 b8830d81f6879fc6931041d43c8d54a1 104 Pfam PF05336 L-rhamnose mutarotase 3 103 1.5E-28 T 18-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 CH53_1107 b8830d81f6879fc6931041d43c8d54a1 104 Gene3D G3DSA:3.30.70.100 1 97 2.9E-39 T 18-10-2018 CH53_1107 b8830d81f6879fc6931041d43c8d54a1 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 103 2.8E-57 T 18-10-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 CH53_1107 b8830d81f6879fc6931041d43c8d54a1 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 32.56 T 18-10-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 CH53_1107 b8830d81f6879fc6931041d43c8d54a1 104 SUPERFAMILY SSF54909 1 103 2.25E-38 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 SUPERFAMILY SSF82866 293 504 4.84E-39 T 18-10-2018 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 Gene3D G3DSA:3.30.2090.10 182 273 1.9E-265 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1042 0.0 T 18-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 Gene3D G3DSA:3.30.70.1320 135 327 1.9E-265 T 18-10-2018 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 SUPERFAMILY SSF82693 45 126 1.07E-19 T 18-10-2018 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 Gene3D G3DSA:1.20.1640.10 514 1032 1.9E-265 T 18-10-2018 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 9.1E-26 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 9.1E-26 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 9.1E-26 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 9.1E-26 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 9.1E-26 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 9.1E-26 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 Gene3D G3DSA:3.30.70.1430 42 818 1.9E-265 T 18-10-2018 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 Gene3D G3DSA:3.30.70.1440 671 868 1.9E-265 T 18-10-2018 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 Pfam PF00873 AcrB/AcrD/AcrF family 5 1036 6.2E-238 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 SUPERFAMILY SSF82693 137 327 1.41E-21 T 18-10-2018 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 SUPERFAMILY SSF82714 185 268 1.18E-18 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 SUPERFAMILY SSF82866 804 1038 5.1E-48 T 18-10-2018 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 Gene3D G3DSA:1.20.1640.10 15 513 1.9E-265 T 18-10-2018 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 SUPERFAMILY SSF82714 722 806 4.71E-17 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 Gene3D G3DSA:3.30.70.1430 568 670 1.9E-265 T 18-10-2018 CH53_2390 15cc9dadba25da84f01a3268fae380a7 1043 Gene3D G3DSA:3.30.2090.10 722 810 1.9E-265 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_1656 b853af332323df559ac058b27a509bc9 507 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 136 152 - T 18-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 CH53_1656 b853af332323df559ac058b27a509bc9 507 Gene3D G3DSA:1.10.275.10 1 194 1.1E-68 T 18-10-2018 IPR024083 Fumarase/histidase, N-terminal CH53_1656 b853af332323df559ac058b27a509bc9 507 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 1 501 43.704 T 18-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CH53_1656 b853af332323df559ac058b27a509bc9 507 Pfam PF00221 Aromatic amino acid lyase 8 467 4.8E-184 T 18-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 CH53_1656 b853af332323df559ac058b27a509bc9 507 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 2 501 2.9E-220 T 18-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CH53_1656 b853af332323df559ac058b27a509bc9 507 Gene3D G3DSA:1.20.200.10 195 506 3.0E-125 T 18-10-2018 CH53_1656 b853af332323df559ac058b27a509bc9 507 SUPERFAMILY SSF48557 2 505 1.57E-190 T 18-10-2018 IPR008948 L-Aspartase-like GO:0003824 CH53_768 d3117c6d15f24e69f61599d16568d494 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 48 251 6.4E-8 T 18-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase CH53_768 d3117c6d15f24e69f61599d16568d494 260 SUPERFAMILY SSF56219 43 258 1.31E-25 T 18-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CH53_768 d3117c6d15f24e69f61599d16568d494 260 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 259 50.402 T 18-10-2018 IPR022958 Uncharacterised protein family UPF0294 CH53_768 d3117c6d15f24e69f61599d16568d494 260 Gene3D G3DSA:3.60.10.10 42 260 3.6E-19 T 18-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CH53_42 8f6e0fb9d9f0253b4c8c57e85f3ed6a0 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 67 2.0E-18 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_42 8f6e0fb9d9f0253b4c8c57e85f3ed6a0 296 SUPERFAMILY SSF46785 7 115 1.4E-21 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_42 8f6e0fb9d9f0253b4c8c57e85f3ed6a0 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.4E-8 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_42 8f6e0fb9d9f0253b4c8c57e85f3ed6a0 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.4E-8 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_42 8f6e0fb9d9f0253b4c8c57e85f3ed6a0 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.4E-8 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_42 8f6e0fb9d9f0253b4c8c57e85f3ed6a0 296 Pfam PF03466 LysR substrate binding domain 93 290 2.7E-24 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_42 8f6e0fb9d9f0253b4c8c57e85f3ed6a0 296 SUPERFAMILY SSF53850 95 294 5.97E-28 T 18-10-2018 CH53_42 8f6e0fb9d9f0253b4c8c57e85f3ed6a0 296 Gene3D G3DSA:1.10.10.10 7 95 4.1E-19 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_42 8f6e0fb9d9f0253b4c8c57e85f3ed6a0 296 Gene3D G3DSA:3.40.190.290 96 290 2.1E-28 T 18-10-2018 CH53_3028 ab8967a44717e18e2693633953906151 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 1.1E-13 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_3028 ab8967a44717e18e2693633953906151 186 SUPERFAMILY SSF46689 3 70 2.46E-15 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3028 ab8967a44717e18e2693633953906151 186 Gene3D G3DSA:1.10.357.10 52 178 4.3E-29 T 18-10-2018 CH53_3028 ab8967a44717e18e2693633953906151 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 9.4E-9 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_3028 ab8967a44717e18e2693633953906151 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 9.4E-9 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_3028 ab8967a44717e18e2693633953906151 186 Gene3D G3DSA:1.10.10.60 5 51 5.4E-20 T 18-10-2018 CH53_3028 ab8967a44717e18e2693633953906151 186 SUPERFAMILY SSF48498 79 178 1.96E-21 T 18-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH53_2513 c6d898efc7e7868d9e86341742f0f1b6 475 SUPERFAMILY SSF53720 42 466 1.57E-60 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CH53_2513 c6d898efc7e7868d9e86341742f0f1b6 475 Gene3D G3DSA:3.40.309.10 249 435 1.3E-114 T 18-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CH53_2513 c6d898efc7e7868d9e86341742f0f1b6 475 Pfam PF00171 Aldehyde dehydrogenase family 42 298 4.5E-25 T 18-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CH53_2513 c6d898efc7e7868d9e86341742f0f1b6 475 Gene3D G3DSA:3.40.605.10 45 447 1.3E-114 T 18-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CH53_2513 c6d898efc7e7868d9e86341742f0f1b6 475 PIRSF PIRSF036410 1 475 2.3E-206 T 18-10-2018 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related CH53_1303 b92101d1b62f82cdfbf005a9147a77f0 156 SUPERFAMILY SSF55252 82 151 2.88E-18 T 18-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 CH53_1303 b92101d1b62f82cdfbf005a9147a77f0 156 SUPERFAMILY SSF46785 3 77 8.98E-21 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1303 b92101d1b62f82cdfbf005a9147a77f0 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 1.0E-20 T 18-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CH53_1303 b92101d1b62f82cdfbf005a9147a77f0 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 2.5E-23 T 18-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CH53_1303 b92101d1b62f82cdfbf005a9147a77f0 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 2.5E-23 T 18-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CH53_1303 b92101d1b62f82cdfbf005a9147a77f0 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 2.5E-23 T 18-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CH53_1303 b92101d1b62f82cdfbf005a9147a77f0 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 2.5E-23 T 18-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CH53_1303 b92101d1b62f82cdfbf005a9147a77f0 156 Gene3D G3DSA:3.30.1360.40 79 156 2.3E-29 T 18-10-2018 CH53_1303 b92101d1b62f82cdfbf005a9147a77f0 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 58.611 T 18-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CH53_1303 b92101d1b62f82cdfbf005a9147a77f0 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 11 151 2.9E-45 T 18-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CH53_1303 b92101d1b62f82cdfbf005a9147a77f0 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 9.0E-30 T 18-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CH53_1303 b92101d1b62f82cdfbf005a9147a77f0 156 Gene3D G3DSA:1.10.10.10 1 78 1.1E-34 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1303 b92101d1b62f82cdfbf005a9147a77f0 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 6.4E-25 T 18-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 CH53_184 e923051fc4c0b088f9e07a1e79afdb1b 340 Gene3D G3DSA:2.40.30.10 14 108 2.4E-18 T 18-10-2018 CH53_184 e923051fc4c0b088f9e07a1e79afdb1b 340 Pfam PF00970 Oxidoreductase FAD-binding domain 42 110 4.2E-8 T 18-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CH53_184 e923051fc4c0b088f9e07a1e79afdb1b 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 212 220 3.2E-7 T 18-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CH53_184 e923051fc4c0b088f9e07a1e79afdb1b 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 121 140 3.2E-7 T 18-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CH53_184 e923051fc4c0b088f9e07a1e79afdb1b 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 43 55 3.2E-7 T 18-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CH53_184 e923051fc4c0b088f9e07a1e79afdb1b 340 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 291 299 - T 18-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CH53_184 e923051fc4c0b088f9e07a1e79afdb1b 340 SUPERFAMILY SSF54292 234 338 1.57E-23 T 18-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CH53_184 e923051fc4c0b088f9e07a1e79afdb1b 340 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 267 332 9.4E-13 T 18-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CH53_184 e923051fc4c0b088f9e07a1e79afdb1b 340 SUPERFAMILY SSF52343 115 244 1.14E-30 T 18-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH53_184 e923051fc4c0b088f9e07a1e79afdb1b 340 Pfam PF00175 Oxidoreductase NAD-binding domain 122 225 7.1E-15 T 18-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CH53_184 e923051fc4c0b088f9e07a1e79afdb1b 340 Gene3D G3DSA:3.40.50.80 112 252 1.9E-26 T 18-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH53_184 e923051fc4c0b088f9e07a1e79afdb1b 340 Gene3D G3DSA:3.10.20.30 256 340 5.3E-21 T 18-10-2018 IPR012675 Beta-grasp domain superfamily CH53_184 e923051fc4c0b088f9e07a1e79afdb1b 340 SUPERFAMILY SSF63380 17 111 4.6E-21 T 18-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CH53_2139 fa284408a6ac84190270d32dd9997ac8 548 Gene3D G3DSA:3.40.50.10490 11 510 4.0E-239 T 18-10-2018 CH53_2139 fa284408a6ac84190270d32dd9997ac8 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 18-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2139 fa284408a6ac84190270d32dd9997ac8 548 SUPERFAMILY SSF53697 5 547 1.64E-224 T 18-10-2018 CH53_2139 fa284408a6ac84190270d32dd9997ac8 548 Gene3D G3DSA:1.10.1390.10 511 548 1.7E-20 T 18-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2139 fa284408a6ac84190270d32dd9997ac8 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.54 T 18-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2139 fa284408a6ac84190270d32dd9997ac8 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 3.4E-55 T 18-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2139 fa284408a6ac84190270d32dd9997ac8 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 3.4E-55 T 18-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2139 fa284408a6ac84190270d32dd9997ac8 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 3.4E-55 T 18-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2139 fa284408a6ac84190270d32dd9997ac8 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 3.4E-55 T 18-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2139 fa284408a6ac84190270d32dd9997ac8 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 3.4E-55 T 18-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2139 fa284408a6ac84190270d32dd9997ac8 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 3.4E-55 T 18-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2139 fa284408a6ac84190270d32dd9997ac8 548 Gene3D G3DSA:3.40.50.10490 98 291 4.0E-239 T 18-10-2018 CH53_2139 fa284408a6ac84190270d32dd9997ac8 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 18-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2139 fa284408a6ac84190270d32dd9997ac8 548 Pfam PF00342 Phosphoglucose isomerase 52 541 6.7E-256 T 18-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_3322 4e892d3fe1d9fcca76c9d67618c697ba 371 Pfam PF00534 Glycosyl transferases group 1 187 347 3.3E-32 T 18-10-2018 IPR001296 Glycosyl transferase, family 1 CH53_3322 4e892d3fe1d9fcca76c9d67618c697ba 371 Gene3D G3DSA:3.40.50.2000 181 353 5.4E-36 T 18-10-2018 CH53_3322 4e892d3fe1d9fcca76c9d67618c697ba 371 SUPERFAMILY SSF53756 9 370 3.06E-70 T 18-10-2018 CH53_3322 4e892d3fe1d9fcca76c9d67618c697ba 371 Pfam PF13439 Glycosyltransferase Family 4 16 173 1.5E-16 T 18-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CH53_3322 4e892d3fe1d9fcca76c9d67618c697ba 371 Gene3D G3DSA:3.40.50.2000 1 180 3.0E-26 T 18-10-2018 CH53_4143 faee87c3ca95ccb076724a9bf9f23c74 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 3.5E-25 T 18-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CH53_4143 faee87c3ca95ccb076724a9bf9f23c74 327 SUPERFAMILY SSF46589 14 99 8.37E-22 T 18-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CH53_4143 faee87c3ca95ccb076724a9bf9f23c74 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.492 T 18-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CH53_4143 faee87c3ca95ccb076724a9bf9f23c74 327 SUPERFAMILY SSF55681 92 327 5.18E-80 T 18-10-2018 CH53_4143 faee87c3ca95ccb076724a9bf9f23c74 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 1.3E-105 T 18-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CH53_4143 faee87c3ca95ccb076724a9bf9f23c74 327 Gene3D G3DSA:3.30.930.10 8 327 2.1E-123 T 18-10-2018 CH53_4143 faee87c3ca95ccb076724a9bf9f23c74 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 1.5E-116 T 18-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CH53_2656 8437ed18831d0faa90cd03efe8feeee1 658 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 539 572 - T 18-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 CH53_2656 8437ed18831d0faa90cd03efe8feeee1 658 Gene3D G3DSA:3.30.1370.120 207 275 1.1E-15 T 18-10-2018 IPR038591 NolW-like superfamily CH53_2656 8437ed18831d0faa90cd03efe8feeee1 658 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 47 603 1.1E-148 T 18-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 CH53_2656 8437ed18831d0faa90cd03efe8feeee1 658 Gene3D G3DSA:3.30.1370.120 37 203 7.9E-52 T 18-10-2018 IPR038591 NolW-like superfamily CH53_2656 8437ed18831d0faa90cd03efe8feeee1 658 Pfam PF03958 Bacterial type II/III secretion system short domain 283 360 9.4E-13 T 18-10-2018 IPR005644 NolW-like CH53_2656 8437ed18831d0faa90cd03efe8feeee1 658 Pfam PF03958 Bacterial type II/III secretion system short domain 144 203 1.2E-10 T 18-10-2018 IPR005644 NolW-like CH53_2656 8437ed18831d0faa90cd03efe8feeee1 658 Pfam PF03958 Bacterial type II/III secretion system short domain 211 277 6.2E-11 T 18-10-2018 IPR005644 NolW-like CH53_2656 8437ed18831d0faa90cd03efe8feeee1 658 Gene3D G3DSA:3.30.1370.120 276 361 1.1E-14 T 18-10-2018 IPR038591 NolW-like superfamily CH53_2656 8437ed18831d0faa90cd03efe8feeee1 658 PRINTS PR00811 Bacterial general secretion pathway protein D signature 581 595 1.4E-35 T 18-10-2018 IPR001775 GspD/PilQ family CH53_2656 8437ed18831d0faa90cd03efe8feeee1 658 PRINTS PR00811 Bacterial general secretion pathway protein D signature 360 370 1.4E-35 T 18-10-2018 IPR001775 GspD/PilQ family CH53_2656 8437ed18831d0faa90cd03efe8feeee1 658 PRINTS PR00811 Bacterial general secretion pathway protein D signature 460 470 1.4E-35 T 18-10-2018 IPR001775 GspD/PilQ family CH53_2656 8437ed18831d0faa90cd03efe8feeee1 658 PRINTS PR00811 Bacterial general secretion pathway protein D signature 425 449 1.4E-35 T 18-10-2018 IPR001775 GspD/PilQ family CH53_2656 8437ed18831d0faa90cd03efe8feeee1 658 PRINTS PR00811 Bacterial general secretion pathway protein D signature 558 576 1.4E-35 T 18-10-2018 IPR001775 GspD/PilQ family CH53_2656 8437ed18831d0faa90cd03efe8feeee1 658 Pfam PF00263 Bacterial type II and III secretion system protein 429 594 1.2E-49 T 18-10-2018 IPR004846 Type II/III secretion system GO:0009306 CH53_156 32828ad30bb6faaaa28254ea1a8d05a4 428 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 18-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CH53_156 32828ad30bb6faaaa28254ea1a8d05a4 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 427 35.205 T 18-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CH53_156 32828ad30bb6faaaa28254ea1a8d05a4 428 PIRSF PIRSF000505 2 428 5.2E-153 T 18-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CH53_156 32828ad30bb6faaaa28254ea1a8d05a4 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 425 1.1E-141 T 18-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CH53_156 32828ad30bb6faaaa28254ea1a8d05a4 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 18-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CH53_156 32828ad30bb6faaaa28254ea1a8d05a4 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 421 2.2E-150 T 18-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CH53_156 32828ad30bb6faaaa28254ea1a8d05a4 428 Gene3D G3DSA:3.65.10.10 242 421 5.3E-157 T 18-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CH53_156 32828ad30bb6faaaa28254ea1a8d05a4 428 SUPERFAMILY SSF55205 4 424 4.39E-143 T 18-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CH53_156 32828ad30bb6faaaa28254ea1a8d05a4 428 Gene3D G3DSA:3.65.10.10 21 224 5.3E-157 T 18-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CH53_434 8c587d3be40aee7848f89984c03fafc6 361 Pfam PF01264 Chorismate synthase 10 345 6.4E-144 T 18-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CH53_434 8c587d3be40aee7848f89984c03fafc6 361 SUPERFAMILY SSF103263 4 351 2.09E-149 T 18-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CH53_434 8c587d3be40aee7848f89984c03fafc6 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 37.936 T 18-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CH53_434 8c587d3be40aee7848f89984c03fafc6 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 18-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CH53_434 8c587d3be40aee7848f89984c03fafc6 361 Gene3D G3DSA:3.60.150.10 1 360 1.9E-159 T 18-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CH53_434 8c587d3be40aee7848f89984c03fafc6 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 18-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CH53_434 8c587d3be40aee7848f89984c03fafc6 361 PIRSF PIRSF001456 3 358 2.2E-142 T 18-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CH53_434 8c587d3be40aee7848f89984c03fafc6 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.5E-140 T 18-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CH53_434 8c587d3be40aee7848f89984c03fafc6 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 18-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CH53_76 3c480827b97fcba3afb3109b55e8b09e 728 SUPERFAMILY SSF49785 19 183 5.1E-34 T 18-10-2018 IPR008979 Galactose-binding-like domain superfamily CH53_76 3c480827b97fcba3afb3109b55e8b09e 728 Gene3D G3DSA:2.60.120.260 18 185 3.5E-30 T 18-10-2018 IPR008979 Galactose-binding-like domain superfamily CH53_76 3c480827b97fcba3afb3109b55e8b09e 728 Pfam PF00703 Glycosyl hydrolases family 2 206 304 9.4E-8 T 18-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CH53_76 3c480827b97fcba3afb3109b55e8b09e 728 SUPERFAMILY SSF49303 190 304 5.76E-18 T 18-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily CH53_76 3c480827b97fcba3afb3109b55e8b09e 728 Gene3D G3DSA:2.60.40.10 190 304 2.5E-14 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_76 3c480827b97fcba3afb3109b55e8b09e 728 Gene3D G3DSA:3.20.20.80 305 622 3.7E-65 T 18-10-2018 CH53_76 3c480827b97fcba3afb3109b55e8b09e 728 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 47 133 4.0E-8 T 18-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CH53_76 3c480827b97fcba3afb3109b55e8b09e 728 SUPERFAMILY SSF51445 302 624 2.96E-74 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_76 3c480827b97fcba3afb3109b55e8b09e 728 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 312 510 5.9E-10 T 18-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 CH53_2917 7432d3449e095e10b21ec600df35418c 404 Gene3D G3DSA:1.20.1250.20 216 404 2.3E-20 T 18-10-2018 CH53_2917 7432d3449e095e10b21ec600df35418c 404 Pfam PF07690 Major Facilitator Superfamily 30 354 2.8E-34 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_2917 7432d3449e095e10b21ec600df35418c 404 SUPERFAMILY SSF103473 14 399 1.57E-56 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_2917 7432d3449e095e10b21ec600df35418c 404 Gene3D G3DSA:1.20.1250.20 14 204 1.2E-21 T 18-10-2018 CH53_540 76e9ee02d3e669e4431f8d47df98decb 293 Gene3D G3DSA:3.40.50.1100 35 140 1.3E-112 T 18-10-2018 CH53_540 76e9ee02d3e669e4431f8d47df98decb 293 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 281 3.3E-66 T 18-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CH53_540 76e9ee02d3e669e4431f8d47df98decb 293 SUPERFAMILY SSF53686 4 289 3.4E-92 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH53_540 76e9ee02d3e669e4431f8d47df98decb 293 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 18-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CH53_540 76e9ee02d3e669e4431f8d47df98decb 293 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 7.4E-149 T 18-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CH53_540 76e9ee02d3e669e4431f8d47df98decb 293 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 3.8E-123 T 18-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CH53_540 76e9ee02d3e669e4431f8d47df98decb 293 Gene3D G3DSA:3.40.50.1100 8 288 1.3E-112 T 18-10-2018 CH53_2436 f0a514ec1d2c4641786ed1dc2c62ce47 315 SUPERFAMILY SSF55729 116 306 9.39E-55 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_2436 f0a514ec1d2c4641786ed1dc2c62ce47 315 Pfam PF13523 Acetyltransferase (GNAT) domain 150 294 7.1E-50 T 18-10-2018 CH53_2436 f0a514ec1d2c4641786ed1dc2c62ce47 315 SMART SM01006 146 193 1.7E-14 T 18-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain CH53_2436 f0a514ec1d2c4641786ed1dc2c62ce47 315 Gene3D G3DSA:3.40.630.30 105 308 7.8E-60 T 18-10-2018 CH53_7 b60e93ec433665a8f2428bde46e095ab 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 2.6E-44 T 18-10-2018 IPR020801 Polyketide synthase, acyl transferase domain CH53_7 b60e93ec433665a8f2428bde46e095ab 309 PIRSF PIRSF000446 1 309 3.4E-137 T 18-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CH53_7 b60e93ec433665a8f2428bde46e095ab 309 Gene3D G3DSA:3.30.70.250 125 197 1.2E-107 T 18-10-2018 CH53_7 b60e93ec433665a8f2428bde46e095ab 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 4.0E-128 T 18-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CH53_7 b60e93ec433665a8f2428bde46e095ab 309 SUPERFAMILY SSF52151 4 307 2.07E-80 T 18-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CH53_7 b60e93ec433665a8f2428bde46e095ab 309 Pfam PF00698 Acyl transferase domain 7 291 6.2E-37 T 18-10-2018 IPR014043 Acyl transferase CH53_7 b60e93ec433665a8f2428bde46e095ab 309 SUPERFAMILY SSF55048 128 197 2.22E-17 T 18-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CH53_7 b60e93ec433665a8f2428bde46e095ab 309 Gene3D G3DSA:3.40.366.10 6 286 1.2E-107 T 18-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 CH53_1802 e1c371a729670e60bbc4607d45bd6e4e 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 18-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CH53_1802 e1c371a729670e60bbc4607d45bd6e4e 207 Pfam PF01323 DSBA-like thioredoxin domain 40 187 6.6E-29 T 18-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CH53_1802 e1c371a729670e60bbc4607d45bd6e4e 207 Gene3D G3DSA:3.40.30.10 18 207 1.3E-53 T 18-10-2018 CH53_1802 e1c371a729670e60bbc4607d45bd6e4e 207 SUPERFAMILY SSF52833 20 204 4.44E-47 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_1802 e1c371a729670e60bbc4607d45bd6e4e 207 PIRSF PIRSF001488 1 207 2.2E-90 T 18-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CH53_211 fded3492514bc5d3a549e575a309b9a2 201 SUPERFAMILY SSF48317 1 175 1.01E-35 T 18-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CH53_211 fded3492514bc5d3a549e575a309b9a2 201 SMART SM00014 59 168 1.7E-22 T 18-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CH53_211 fded3492514bc5d3a549e575a309b9a2 201 Pfam PF01569 PAP2 superfamily 64 168 2.1E-13 T 18-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CH53_211 fded3492514bc5d3a549e575a309b9a2 201 Gene3D G3DSA:1.20.144.10 93 184 7.7E-17 T 18-10-2018 CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 Pfam PF00072 Response regulator receiver domain 6 115 2.2E-31 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 Gene3D G3DSA:1.10.10.60 380 470 7.9E-29 T 18-10-2018 CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 Pfam PF00158 Sigma-54 interaction domain 141 307 4.8E-70 T 18-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 SUPERFAMILY SSF52172 6 186 6.26E-47 T 18-10-2018 IPR011006 CheY-like superfamily CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 SMART SM00382 161 312 4.3E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 467 8.9E-244 T 18-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 SUPERFAMILY SSF46689 381 470 1.43E-24 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 18-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 Gene3D G3DSA:1.10.8.60 312 378 1.7E-18 T 18-10-2018 CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 Pfam PF02954 Bacterial regulatory protein, Fis family 428 467 1.7E-15 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 SMART SM00448 4 115 3.1E-37 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 18-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 8.0E-11 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 470 8.0E-11 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 Gene3D G3DSA:3.40.50.2300 1 124 7.5E-46 T 18-10-2018 CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 SUPERFAMILY SSF52540 140 384 6.73E-73 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1807 cfbc6f57c172e216b9815ab037a57003 470 Gene3D G3DSA:3.40.50.300 129 311 4.0E-66 T 18-10-2018 CH53_958 c2a21ccef3fa7489a7e62b4006ecdee3 285 Gene3D G3DSA:3.40.50.1980 153 277 1.5E-33 T 18-10-2018 CH53_958 c2a21ccef3fa7489a7e62b4006ecdee3 285 SUPERFAMILY SSF53807 33 274 8.63E-57 T 18-10-2018 CH53_958 c2a21ccef3fa7489a7e62b4006ecdee3 285 Pfam PF01497 Periplasmic binding protein 36 235 2.5E-25 T 18-10-2018 IPR002491 ABC transporter periplasmic binding domain CH53_958 c2a21ccef3fa7489a7e62b4006ecdee3 285 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 11 278 50.882 T 18-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 CH53_958 c2a21ccef3fa7489a7e62b4006ecdee3 285 Gene3D G3DSA:3.40.50.1980 32 151 1.9E-37 T 18-10-2018 CH53_271 f13be3339df746ec0ee0a8995201aaaa 597 PIRSF PIRSF004950 6 597 1.1E-239 T 18-10-2018 IPR012159 Inner membrane protein YejM CH53_271 f13be3339df746ec0ee0a8995201aaaa 597 Gene3D G3DSA:3.40.720.10 249 523 1.3E-37 T 18-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CH53_271 f13be3339df746ec0ee0a8995201aaaa 597 Pfam PF11893 Domain of unknown function (DUF3413) 6 252 4.8E-107 T 18-10-2018 IPR024588 Inner membrane protein YejM, N-terminal CH53_271 f13be3339df746ec0ee0a8995201aaaa 597 SUPERFAMILY SSF53649 256 581 3.05E-48 T 18-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CH53_271 f13be3339df746ec0ee0a8995201aaaa 597 Pfam PF00884 Sulfatase 260 511 1.0E-23 T 18-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CH53_890 5c8ab575280e03c3f1b4683c68e4b9b5 391 Gene3D G3DSA:1.10.287.470 99 190 1.6E-83 T 18-10-2018 CH53_890 5c8ab575280e03c3f1b4683c68e4b9b5 391 Gene3D G3DSA:2.40.50.100 65 227 1.6E-83 T 18-10-2018 CH53_890 5c8ab575280e03c3f1b4683c68e4b9b5 391 Gene3D G3DSA:2.40.30.170 54 319 1.6E-83 T 18-10-2018 CH53_890 5c8ab575280e03c3f1b4683c68e4b9b5 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 383 1.1E-43 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CH53_890 5c8ab575280e03c3f1b4683c68e4b9b5 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 269 1.5E-14 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH53_890 5c8ab575280e03c3f1b4683c68e4b9b5 391 SUPERFAMILY SSF111369 57 243 1.29E-22 T 18-10-2018 CH53_890 5c8ab575280e03c3f1b4683c68e4b9b5 391 Gene3D G3DSA:2.40.420.20 49 379 1.6E-83 T 18-10-2018 CH53_528 f3881c86076ddd22a0702de3f6154310 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 4.6E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_528 f3881c86076ddd22a0702de3f6154310 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 407 4.6E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_528 f3881c86076ddd22a0702de3f6154310 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 4.6E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_528 f3881c86076ddd22a0702de3f6154310 455 Gene3D G3DSA:1.10.287.130 180 296 9.6E-30 T 18-10-2018 CH53_528 f3881c86076ddd22a0702de3f6154310 455 SMART SM00388 232 295 1.3E-11 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_528 f3881c86076ddd22a0702de3f6154310 455 Pfam PF00672 HAMP domain 177 227 1.1E-11 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_528 f3881c86076ddd22a0702de3f6154310 455 Gene3D G3DSA:3.30.565.10 300 451 1.3E-33 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_528 f3881c86076ddd22a0702de3f6154310 455 SUPERFAMILY SSF158472 177 229 2.35E-8 T 18-10-2018 CH53_528 f3881c86076ddd22a0702de3f6154310 455 SUPERFAMILY SSF47384 216 296 3.14E-15 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_528 f3881c86076ddd22a0702de3f6154310 455 SMART SM00387 342 452 2.3E-28 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_528 f3881c86076ddd22a0702de3f6154310 455 SUPERFAMILY SSF55874 285 450 7.2E-37 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_528 f3881c86076ddd22a0702de3f6154310 455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 294 7.0E-11 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_528 f3881c86076ddd22a0702de3f6154310 455 SMART SM00304 176 231 1.7E-12 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_528 f3881c86076ddd22a0702de3f6154310 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 449 6.9E-17 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_341 6a98672ff46d8a32ca2a56bc20ffdf73 761 Gene3D G3DSA:1.10.1650.20 341 394 1.4E-156 T 18-10-2018 CH53_341 6a98672ff46d8a32ca2a56bc20ffdf73 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.5E-38 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_341 6a98672ff46d8a32ca2a56bc20ffdf73 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.5E-38 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_341 6a98672ff46d8a32ca2a56bc20ffdf73 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.5E-38 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_341 6a98672ff46d8a32ca2a56bc20ffdf73 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.5E-38 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_341 6a98672ff46d8a32ca2a56bc20ffdf73 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.5E-38 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_341 6a98672ff46d8a32ca2a56bc20ffdf73 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.5E-38 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_341 6a98672ff46d8a32ca2a56bc20ffdf73 761 SUPERFAMILY SSF48168 10 221 2.09E-73 T 18-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_341 6a98672ff46d8a32ca2a56bc20ffdf73 761 Pfam PF03477 ATP cone domain 6 92 1.1E-15 T 18-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CH53_341 6a98672ff46d8a32ca2a56bc20ffdf73 761 SUPERFAMILY SSF51998 222 741 2.04E-168 T 18-10-2018 CH53_341 6a98672ff46d8a32ca2a56bc20ffdf73 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 2.1E-117 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_341 6a98672ff46d8a32ca2a56bc20ffdf73 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_341 6a98672ff46d8a32ca2a56bc20ffdf73 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 3.7E-179 T 18-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_341 6a98672ff46d8a32ca2a56bc20ffdf73 761 Gene3D G3DSA:3.20.70.20 209 732 1.4E-156 T 18-10-2018 CH53_341 6a98672ff46d8a32ca2a56bc20ffdf73 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 1.0E-11 T 18-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_936 abc8f9c9a8b5b4ebf8f7507c9a39b758 216 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 41 212 37.783 T 18-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CH53_936 abc8f9c9a8b5b4ebf8f7507c9a39b758 216 SUPERFAMILY SSF52540 40 207 7.3E-36 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_936 abc8f9c9a8b5b4ebf8f7507c9a39b758 216 Pfam PF01583 Adenylylsulphate kinase 42 192 1.3E-71 T 18-10-2018 CH53_936 abc8f9c9a8b5b4ebf8f7507c9a39b758 216 Gene3D G3DSA:3.40.50.300 20 216 2.1E-77 T 18-10-2018 CH53_936 abc8f9c9a8b5b4ebf8f7507c9a39b758 216 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 25 208 1.5E-84 T 18-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CH53_654 552eb850ea19e451aacb2efdab7ba45c 417 PIRSF PIRSF000412 1 417 5.7E-168 T 18-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CH53_654 552eb850ea19e451aacb2efdab7ba45c 417 Gene3D G3DSA:3.40.640.10 37 289 7.1E-183 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_654 552eb850ea19e451aacb2efdab7ba45c 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.328 T 18-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CH53_654 552eb850ea19e451aacb2efdab7ba45c 417 SUPERFAMILY SSF53383 6 416 2.2E-179 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_654 552eb850ea19e451aacb2efdab7ba45c 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 18-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CH53_654 552eb850ea19e451aacb2efdab7ba45c 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 1.1E-184 T 18-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CH53_654 552eb850ea19e451aacb2efdab7ba45c 417 Gene3D G3DSA:3.90.1150.10 10 395 7.1E-183 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_365 14f83b8eb538f8a0905b4fb573e6d6c2 254 SUPERFAMILY SSF51735 8 252 1.18E-79 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_365 14f83b8eb538f8a0905b4fb573e6d6c2 254 Gene3D G3DSA:3.40.50.720 1 253 2.1E-78 T 18-10-2018 CH53_365 14f83b8eb538f8a0905b4fb573e6d6c2 254 Pfam PF00106 short chain dehydrogenase 11 203 1.2E-62 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_365 14f83b8eb538f8a0905b4fb573e6d6c2 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.9E-40 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_365 14f83b8eb538f8a0905b4fb573e6d6c2 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.9E-40 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_365 14f83b8eb538f8a0905b4fb573e6d6c2 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.9E-40 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_365 14f83b8eb538f8a0905b4fb573e6d6c2 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.9E-40 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_365 14f83b8eb538f8a0905b4fb573e6d6c2 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.9E-40 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_365 14f83b8eb538f8a0905b4fb573e6d6c2 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.9E-40 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_365 14f83b8eb538f8a0905b4fb573e6d6c2 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.9E-13 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_365 14f83b8eb538f8a0905b4fb573e6d6c2 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 8.9E-13 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_365 14f83b8eb538f8a0905b4fb573e6d6c2 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.9E-13 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_365 14f83b8eb538f8a0905b4fb573e6d6c2 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CH53_3742 77db633de5416cb691cbefb9545af91a 456 Gene3D G3DSA:2.30.40.10 9 433 8.1E-181 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_3742 77db633de5416cb691cbefb9545af91a 456 Gene3D G3DSA:3.20.20.140 52 445 8.1E-181 T 18-10-2018 CH53_3742 77db633de5416cb691cbefb9545af91a 456 SUPERFAMILY SSF51556 50 364 4.22E-68 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_3742 77db633de5416cb691cbefb9545af91a 456 SUPERFAMILY SSF51338 380 433 3.53E-5 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_3742 77db633de5416cb691cbefb9545af91a 456 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 453 2.6E-218 T 18-10-2018 IPR010252 Formiminoglutamate deiminase CH53_3742 77db633de5416cb691cbefb9545af91a 456 Pfam PF01979 Amidohydrolase family 48 429 6.4E-29 T 18-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CH53_1913 d779fa7b6da8afd88b13d151f6955d7e 340 Gene3D G3DSA:3.40.50.720 6 330 1.5E-128 T 18-10-2018 CH53_1913 d779fa7b6da8afd88b13d151f6955d7e 340 Gene3D G3DSA:3.30.360.10 153 312 1.5E-128 T 18-10-2018 CH53_1913 d779fa7b6da8afd88b13d151f6955d7e 340 SMART SM00859 3 146 3.7E-54 T 18-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CH53_1913 d779fa7b6da8afd88b13d151f6955d7e 340 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 18-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CH53_1913 d779fa7b6da8afd88b13d151f6955d7e 340 SUPERFAMILY SSF51735 2 183 7.65E-47 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1913 d779fa7b6da8afd88b13d151f6955d7e 340 SUPERFAMILY SSF55347 154 308 4.91E-50 T 18-10-2018 CH53_1913 d779fa7b6da8afd88b13d151f6955d7e 340 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 40.036 T 18-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CH53_1913 d779fa7b6da8afd88b13d151f6955d7e 340 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 1.1E-13 T 18-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CH53_1913 d779fa7b6da8afd88b13d151f6955d7e 340 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 5.2E-128 T 18-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CH53_1913 d779fa7b6da8afd88b13d151f6955d7e 340 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 1.9E-34 T 18-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CH53_2328 c9b974abdad8f155be07b0b7df51260e 337 Gene3D G3DSA:3.30.420.40 129 293 2.0E-133 T 18-10-2018 CH53_2328 c9b974abdad8f155be07b0b7df51260e 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 2.5E-127 T 18-10-2018 IPR017861 Kae1/TsaD family CH53_2328 c9b974abdad8f155be07b0b7df51260e 337 SUPERFAMILY SSF53067 1 309 6.64E-44 T 18-10-2018 CH53_2328 c9b974abdad8f155be07b0b7df51260e 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 18-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 CH53_2328 c9b974abdad8f155be07b0b7df51260e 337 Pfam PF00814 Glycoprotease family 24 307 1.3E-103 T 18-10-2018 IPR000905 Gcp-like domain CH53_2328 c9b974abdad8f155be07b0b7df51260e 337 Gene3D G3DSA:3.30.420.40 3 315 2.0E-133 T 18-10-2018 CH53_2328 c9b974abdad8f155be07b0b7df51260e 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.3E-52 T 18-10-2018 IPR017861 Kae1/TsaD family CH53_2328 c9b974abdad8f155be07b0b7df51260e 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.3E-52 T 18-10-2018 IPR017861 Kae1/TsaD family CH53_2328 c9b974abdad8f155be07b0b7df51260e 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.3E-52 T 18-10-2018 IPR017861 Kae1/TsaD family CH53_2328 c9b974abdad8f155be07b0b7df51260e 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.3E-52 T 18-10-2018 IPR017861 Kae1/TsaD family CH53_2328 c9b974abdad8f155be07b0b7df51260e 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.3E-52 T 18-10-2018 IPR017861 Kae1/TsaD family CH53_2328 c9b974abdad8f155be07b0b7df51260e 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.3E-52 T 18-10-2018 IPR017861 Kae1/TsaD family CH53_2328 c9b974abdad8f155be07b0b7df51260e 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 4.7E-136 T 18-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 CH53_2328 c9b974abdad8f155be07b0b7df51260e 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.649 T 18-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 CH53_3152 042c7301e45e9e0da2ff6f28ea94a807 228 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 4 224 43.381 T 18-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 CH53_3152 042c7301e45e9e0da2ff6f28ea94a807 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 207 4.7E-42 T 18-10-2018 IPR002898 MotA/TolQ/ExbB proton channel CH53_3152 042c7301e45e9e0da2ff6f28ea94a807 228 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 9.4E-94 T 18-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 CH53_1540 3ce34a3ee6a7cb8c3ebd7ad9399218fc 270 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 9.8E-74 T 18-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CH53_1540 3ce34a3ee6a7cb8c3ebd7ad9399218fc 270 Gene3D G3DSA:3.40.50.150 7 239 5.3E-84 T 18-10-2018 CH53_1540 3ce34a3ee6a7cb8c3ebd7ad9399218fc 270 PIRSF PIRSF000398 1 270 1.3E-64 T 18-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CH53_1540 3ce34a3ee6a7cb8c3ebd7ad9399218fc 270 SUPERFAMILY SSF53335 5 268 5.98E-73 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_1540 3ce34a3ee6a7cb8c3ebd7ad9399218fc 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 9.8E-19 T 18-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CH53_1540 3ce34a3ee6a7cb8c3ebd7ad9399218fc 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 9.8E-19 T 18-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CH53_1540 3ce34a3ee6a7cb8c3ebd7ad9399218fc 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 9.8E-19 T 18-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CH53_1540 3ce34a3ee6a7cb8c3ebd7ad9399218fc 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 9.8E-19 T 18-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CH53_1540 3ce34a3ee6a7cb8c3ebd7ad9399218fc 270 Gene3D G3DSA:1.10.1020.10 57 156 5.3E-84 T 18-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 CH53_1540 3ce34a3ee6a7cb8c3ebd7ad9399218fc 270 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 18-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CH53_1540 3ce34a3ee6a7cb8c3ebd7ad9399218fc 270 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 6.4E-94 T 18-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CH53_1406 474eb76e6f9f730b1249246eb0d804e0 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 5.4E-37 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CH53_1406 474eb76e6f9f730b1249246eb0d804e0 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 225 242 5.4E-37 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CH53_1406 474eb76e6f9f730b1249246eb0d804e0 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 205 223 5.4E-37 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CH53_1406 474eb76e6f9f730b1249246eb0d804e0 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 269 284 5.4E-37 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CH53_1406 474eb76e6f9f730b1249246eb0d804e0 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 299 320 5.4E-37 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CH53_1406 474eb76e6f9f730b1249246eb0d804e0 357 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 342 3.5E-102 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CH53_1406 474eb76e6f9f730b1249246eb0d804e0 357 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 6 344 3.8E-115 T 18-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 CH53_1406 474eb76e6f9f730b1249246eb0d804e0 357 SUPERFAMILY SSF160544 241 347 8.5E-32 T 18-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CH53_1406 474eb76e6f9f730b1249246eb0d804e0 357 Gene3D G3DSA:3.40.1690.10 214 353 5.7E-49 T 18-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CH53_1128 ae9be331d43e25a4faaa2b2888261d8e 330 Gene3D G3DSA:3.20.20.100 1 328 3.7E-120 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CH53_1128 ae9be331d43e25a4faaa2b2888261d8e 330 Pfam PF00248 Aldo/keto reductase family 16 308 1.5E-78 T 18-10-2018 IPR023210 NADP-dependent oxidoreductase domain CH53_1128 ae9be331d43e25a4faaa2b2888261d8e 330 SUPERFAMILY SSF51430 1 311 3.8E-104 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 Gene3D G3DSA:1.10.287.130 692 781 5.0E-22 T 18-10-2018 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 SUPERFAMILY SSF47384 700 784 3.92E-19 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 65 229 1.1E-13 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 SUPERFAMILY SSF53850 64 267 1.2E-22 T 18-10-2018 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 PRINTS PR00344 Bacterial sensor protein C-terminal signature 889 899 2.0E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 PRINTS PR00344 Bacterial sensor protein C-terminal signature 928 941 2.0E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 PRINTS PR00344 Bacterial sensor protein C-terminal signature 904 922 2.0E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 PRINTS PR00344 Bacterial sensor protein C-terminal signature 871 885 2.0E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 SMART SM00388 717 783 6.1E-20 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 SUPERFAMILY SSF55874 773 940 4.71E-38 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 Gene3D G3DSA:3.40.190.10 56 276 7.2E-43 T 18-10-2018 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 SMART SM00448 965 1076 3.9E-32 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 Gene3D G3DSA:3.40.190.10 300 524 2.6E-61 T 18-10-2018 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 310 525 4.4E-31 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 Gene3D G3DSA:3.40.190.10 150 244 7.2E-43 T 18-10-2018 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 Pfam PF01627 Hpt domain 1111 1191 2.8E-7 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 Gene3D G3DSA:1.20.120.160 1090 1201 2.6E-14 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 SUPERFAMILY SSF55785 568 695 4.0E-6 T 18-10-2018 IPR035965 PAS domain superfamily CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 831 942 5.5E-27 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 Gene3D G3DSA:3.30.565.10 782 946 1.3E-42 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 Pfam PF00512 His Kinase A (phospho-acceptor) domain 717 783 5.7E-17 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 SMART SM00387 830 944 1.3E-30 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 Gene3D G3DSA:3.40.50.2300 962 1089 1.5E-34 T 18-10-2018 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 SMART SM00062 309 528 1.2E-34 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 SMART SM00062 63 307 1.7E-4 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 SUPERFAMILY SSF52172 963 1086 7.12E-35 T 18-10-2018 IPR011006 CheY-like superfamily CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 SUPERFAMILY SSF53850 310 527 2.63E-37 T 18-10-2018 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 SUPERFAMILY SSF47226 1059 1189 3.4E-16 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 Pfam PF00072 Response regulator receiver domain 967 1076 1.1E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_2563 77ecd4b7c12e7d6908eeb0e6f2ba6bfe 1204 Gene3D G3DSA:3.40.190.10 395 487 2.6E-61 T 18-10-2018 CH53_1730 05f302e779be14cb42fc25a2e328124b 366 Gene3D G3DSA:3.10.150.10 248 366 2.4E-41 T 18-10-2018 CH53_1730 05f302e779be14cb42fc25a2e328124b 366 SUPERFAMILY SSF55979 245 366 5.8E-37 T 18-10-2018 CH53_1730 05f302e779be14cb42fc25a2e328124b 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 1.8E-38 T 18-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 CH53_1730 05f302e779be14cb42fc25a2e328124b 366 SUPERFAMILY SSF55979 125 244 3.62E-31 T 18-10-2018 CH53_1730 05f302e779be14cb42fc25a2e328124b 366 SMART SM00480 17 362 5.0E-167 T 18-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CH53_1730 05f302e779be14cb42fc25a2e328124b 366 SUPERFAMILY SSF55979 1 121 1.38E-25 T 18-10-2018 CH53_1730 05f302e779be14cb42fc25a2e328124b 366 Gene3D G3DSA:3.10.150.10 1 123 6.1E-42 T 18-10-2018 CH53_1730 05f302e779be14cb42fc25a2e328124b 366 PIRSF PIRSF000804 1 366 2.1E-115 T 18-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CH53_1730 05f302e779be14cb42fc25a2e328124b 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 3.1E-40 T 18-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 CH53_1730 05f302e779be14cb42fc25a2e328124b 366 Gene3D G3DSA:3.10.150.10 124 247 4.0E-40 T 18-10-2018 CH53_1730 05f302e779be14cb42fc25a2e328124b 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.1E-111 T 18-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CH53_1730 05f302e779be14cb42fc25a2e328124b 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.3E-43 T 18-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 CH53_1550 2015d82e5900efa0c693bdfe79988a93 181 Pfam PF00293 NUDIX domain 46 132 1.8E-13 T 18-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CH53_1550 2015d82e5900efa0c693bdfe79988a93 181 SUPERFAMILY SSF55811 3 180 4.6E-37 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CH53_1550 2015d82e5900efa0c693bdfe79988a93 181 Gene3D G3DSA:3.90.79.10 7 181 2.1E-44 T 18-10-2018 CH53_1550 2015d82e5900efa0c693bdfe79988a93 181 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 18-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CH53_1023 322a2fbfa064ac6b886f942356c0d4ea 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 424 2.8E-25 T 18-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CH53_1023 322a2fbfa064ac6b886f942356c0d4ea 495 Gene3D G3DSA:3.90.190.20 342 494 1.5E-55 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CH53_1023 322a2fbfa064ac6b886f942356c0d4ea 495 SUPERFAMILY SSF53244 339 491 1.3E-50 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CH53_1023 322a2fbfa064ac6b886f942356c0d4ea 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 34.446 T 18-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CH53_1023 322a2fbfa064ac6b886f942356c0d4ea 495 SUPERFAMILY SSF53623 105 338 9.03E-77 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CH53_1023 322a2fbfa064ac6b886f942356c0d4ea 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 2.0E-13 T 18-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CH53_1023 322a2fbfa064ac6b886f942356c0d4ea 495 Gene3D G3DSA:3.40.1190.10 105 341 1.4E-88 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CH53_1023 322a2fbfa064ac6b886f942356c0d4ea 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 491 2.9E-165 T 18-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CH53_1023 322a2fbfa064ac6b886f942356c0d4ea 495 SUPERFAMILY SSF63418 5 103 1.83E-24 T 18-10-2018 IPR035911 MurE/MurF, N-terminal CH53_1023 322a2fbfa064ac6b886f942356c0d4ea 495 Gene3D G3DSA:3.40.1390.10 2 104 1.5E-33 T 18-10-2018 CH53_1023 322a2fbfa064ac6b886f942356c0d4ea 495 Pfam PF08245 Mur ligase middle domain 114 317 1.2E-50 T 18-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CH53_1901 138663a50f9ff65d04600e97507829ab 176 PIRSF PIRSF039093 1 175 4.9E-89 T 18-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CH53_1901 138663a50f9ff65d04600e97507829ab 176 Gene3D G3DSA:3.60.20.10 1 173 1.2E-67 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CH53_1901 138663a50f9ff65d04600e97507829ab 176 SUPERFAMILY SSF56235 2 172 3.05E-58 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CH53_1901 138663a50f9ff65d04600e97507829ab 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.909 T 18-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CH53_1901 138663a50f9ff65d04600e97507829ab 176 Pfam PF00227 Proteasome subunit 2 165 1.1E-22 T 18-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 CH53_1901 138663a50f9ff65d04600e97507829ab 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 6.3E-87 T 18-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 Gene3D G3DSA:3.30.70.1320 144 335 5.1E-296 T 18-10-2018 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1039 34.921 T 18-10-2018 IPR022831 Multidrug resistance protein MdtB CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 SUPERFAMILY SSF82693 146 333 6.28E-21 T 18-10-2018 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 SUPERFAMILY SSF82866 299 498 2.88E-46 T 18-10-2018 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 SUPERFAMILY SSF82693 565 662 3.14E-15 T 18-10-2018 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 SUPERFAMILY SSF82866 799 1025 3.66E-47 T 18-10-2018 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 Gene3D G3DSA:3.30.2090.10 715 803 5.1E-296 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 Gene3D G3DSA:1.20.1640.10 513 1019 5.1E-296 T 18-10-2018 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 SUPERFAMILY SSF82693 49 142 8.63E-23 T 18-10-2018 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 Gene3D G3DSA:3.30.70.1430 49 811 5.1E-296 T 18-10-2018 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 1.3E-81 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.3E-81 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.3E-81 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.3E-81 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 1.3E-81 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.3E-81 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.3E-81 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 1.3E-81 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.3E-81 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 Gene3D G3DSA:3.30.2090.10 188 278 5.1E-296 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 Gene3D G3DSA:3.30.70.1430 567 662 5.1E-296 T 18-10-2018 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 SUPERFAMILY SSF82714 192 275 1.14E-16 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 Gene3D G3DSA:1.20.1640.10 19 512 5.1E-296 T 18-10-2018 CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 SUPERFAMILY SSF82714 719 802 1.57E-15 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_600 78b2e86e5c34fff3e227643be080c9ec 1052 Gene3D G3DSA:3.30.70.1440 663 861 5.1E-296 T 18-10-2018 CH53_2647 6c984d92e75929b1b568ba6ffe1d4545 435 Pfam PF07690 Major Facilitator Superfamily 29 326 3.2E-45 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_2647 6c984d92e75929b1b568ba6ffe1d4545 435 Gene3D G3DSA:1.20.1250.20 14 209 6.4E-45 T 18-10-2018 CH53_2647 6c984d92e75929b1b568ba6ffe1d4545 435 Gene3D G3DSA:1.20.1250.20 232 433 2.6E-27 T 18-10-2018 CH53_2647 6c984d92e75929b1b568ba6ffe1d4545 435 SUPERFAMILY SSF103473 14 431 2.35E-79 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_1877 5c9ab5a8bb5604f6d6cd9567816892bb 273 SMART SM00971 9 113 4.5E-60 T 18-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CH53_1877 5c9ab5a8bb5604f6d6cd9567816892bb 273 Gene3D G3DSA:2.160.10.10 143 273 1.7E-37 T 18-10-2018 CH53_1877 5c9ab5a8bb5604f6d6cd9567816892bb 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 1.5E-37 T 18-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CH53_1877 5c9ab5a8bb5604f6d6cd9567816892bb 273 PIRSF PIRSF000441 75 264 5.3E-59 T 18-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CH53_1877 5c9ab5a8bb5604f6d6cd9567816892bb 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 6.2E-10 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_1877 5c9ab5a8bb5604f6d6cd9567816892bb 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 18-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CH53_1877 5c9ab5a8bb5604f6d6cd9567816892bb 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 83 242 2.0E-73 T 18-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CH53_1877 5c9ab5a8bb5604f6d6cd9567816892bb 273 Gene3D G3DSA:1.10.3130.10 1 142 4.5E-52 T 18-10-2018 CH53_1877 5c9ab5a8bb5604f6d6cd9567816892bb 273 SUPERFAMILY SSF51161 9 260 1.94E-65 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily CH53_216 53e2311bdfbc3ec967a7d8f616c6127d 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 152 165 1.4E-17 T 18-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CH53_216 53e2311bdfbc3ec967a7d8f616c6127d 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 1.4E-17 T 18-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CH53_216 53e2311bdfbc3ec967a7d8f616c6127d 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 125 142 1.4E-17 T 18-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CH53_216 53e2311bdfbc3ec967a7d8f616c6127d 401 SUPERFAMILY SSF56601 9 286 5.03E-82 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CH53_216 53e2311bdfbc3ec967a7d8f616c6127d 401 Gene3D G3DSA:2.60.410.10 286 377 4.5E-25 T 18-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_216 53e2311bdfbc3ec967a7d8f616c6127d 401 SMART SM00936 286 377 1.9E-28 T 18-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_216 53e2311bdfbc3ec967a7d8f616c6127d 401 Gene3D G3DSA:3.40.710.10 26 285 1.0E-90 T 18-10-2018 CH53_216 53e2311bdfbc3ec967a7d8f616c6127d 401 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 286 377 3.3E-20 T 18-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_216 53e2311bdfbc3ec967a7d8f616c6127d 401 SUPERFAMILY SSF69189 286 379 1.61E-23 T 18-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_216 53e2311bdfbc3ec967a7d8f616c6127d 401 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 35 266 1.2E-97 T 18-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CH53_1967 6be8ab07745e9791d47f019dd36a6765 608 Pfam PF00295 Glycosyl hydrolases family 28 323 549 8.8E-24 T 18-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 CH53_1967 6be8ab07745e9791d47f019dd36a6765 608 SUPERFAMILY SSF49265 32 153 1.33E-11 T 18-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 CH53_1967 6be8ab07745e9791d47f019dd36a6765 608 SMART SM00060 35 140 1.7E-7 T 18-10-2018 IPR003961 Fibronectin type III GO:0005515 CH53_1967 6be8ab07745e9791d47f019dd36a6765 608 Gene3D G3DSA:2.60.40.10 36 151 4.4E-36 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_1967 6be8ab07745e9791d47f019dd36a6765 608 SUPERFAMILY SSF51126 143 596 2.19E-73 T 18-10-2018 IPR011050 Pectin lyase fold/virulence factor CH53_1967 6be8ab07745e9791d47f019dd36a6765 608 Gene3D G3DSA:2.160.20.10 152 608 2.4E-145 T 18-10-2018 IPR012334 Pectin lyase fold CH53_1967 6be8ab07745e9791d47f019dd36a6765 608 Pfam PF12708 Pectate lyase superfamily protein 156 196 1.8E-6 T 18-10-2018 IPR024535 Pectate lyase superfamily protein CH53_1967 6be8ab07745e9791d47f019dd36a6765 608 Pfam PF00041 Fibronectin type III domain 36 137 1.3E-7 T 18-10-2018 IPR003961 Fibronectin type III GO:0005515 CH53_1572 2427402d821342f08cf5e1fe5ea67881 278 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 275 48.862 T 18-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 CH53_1572 2427402d821342f08cf5e1fe5ea67881 278 Pfam PF01694 Rhomboid family 132 271 3.9E-28 T 18-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CH53_1572 2427402d821342f08cf5e1fe5ea67881 278 Gene3D G3DSA:1.20.1540.10 92 271 4.4E-59 T 18-10-2018 IPR035952 Rhomboid-like superfamily CH53_1572 2427402d821342f08cf5e1fe5ea67881 278 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 271 2.4E-121 T 18-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 CH53_1572 2427402d821342f08cf5e1fe5ea67881 278 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 84 7.6E-29 T 18-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 CH53_1572 2427402d821342f08cf5e1fe5ea67881 278 Gene3D G3DSA:3.30.70.2350 1 68 7.1E-23 T 18-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily CH53_1572 2427402d821342f08cf5e1fe5ea67881 278 SUPERFAMILY SSF144091 94 270 6.8E-43 T 18-10-2018 CH53_4074 75d20ff913a231a807ec7448205efa68 118 SUPERFAMILY SSF54593 8 117 5.37E-26 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_4074 75d20ff913a231a807ec7448205efa68 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 112 9.0E-10 T 18-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CH53_4074 75d20ff913a231a807ec7448205efa68 118 Gene3D G3DSA:3.10.180.10 3 118 2.0E-21 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_3924 84352fb68379f948ffdc8c85c14bc9c7 221 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 18-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CH53_3924 84352fb68379f948ffdc8c85c14bc9c7 221 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 1.8E-80 T 18-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CH53_3924 84352fb68379f948ffdc8c85c14bc9c7 221 SUPERFAMILY SSF51569 1 215 4.71E-63 T 18-10-2018 CH53_3924 84352fb68379f948ffdc8c85c14bc9c7 221 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 206 1.7E-42 T 18-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CH53_3924 84352fb68379f948ffdc8c85c14bc9c7 221 Gene3D G3DSA:3.20.20.70 1 219 1.0E-76 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3924 84352fb68379f948ffdc8c85c14bc9c7 221 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 18-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CH53_3601 6dce7eb005dce96704ec3398f33eefbd 375 Pfam PF13473 Cupredoxin-like domain 13 116 6.0E-24 T 18-10-2018 IPR028096 EfeO-type cupredoxin-like domain CH53_3601 6dce7eb005dce96704ec3398f33eefbd 375 SUPERFAMILY SSF49503 15 116 1.89E-5 T 18-10-2018 IPR008972 Cupredoxin CH53_3601 6dce7eb005dce96704ec3398f33eefbd 375 Gene3D G3DSA:1.20.1420.20 128 375 8.9E-100 T 18-10-2018 IPR038352 Imelysin-like domain superfamily CH53_3601 6dce7eb005dce96704ec3398f33eefbd 375 Pfam PF09375 Imelysin 136 368 2.7E-44 T 18-10-2018 IPR018976 Imelysin-like domain CH53_2300 67bc0700ab93f8b76d218ce7a5788e0a 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 458 5.2E-69 T 18-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CH53_2300 67bc0700ab93f8b76d218ce7a5788e0a 483 Gene3D G3DSA:1.10.1040.10 272 483 6.6E-61 T 18-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CH53_2300 67bc0700ab93f8b76d218ce7a5788e0a 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 4.4E-28 T 18-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CH53_2300 67bc0700ab93f8b76d218ce7a5788e0a 483 Gene3D G3DSA:3.40.50.720 3 266 7.2E-49 T 18-10-2018 CH53_2300 67bc0700ab93f8b76d218ce7a5788e0a 483 SUPERFAMILY SSF48179 273 482 7.14E-50 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_2300 67bc0700ab93f8b76d218ce7a5788e0a 483 SUPERFAMILY SSF51735 2 262 5.9E-66 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_628 c479a28b5c7e754fd1c81fd726c22548 424 Gene3D G3DSA:3.40.50.800 327 422 8.7E-25 T 18-10-2018 IPR036621 Anticodon-binding domain superfamily CH53_628 c479a28b5c7e754fd1c81fd726c22548 424 SUPERFAMILY SSF55681 5 320 1.03E-105 T 18-10-2018 CH53_628 c479a28b5c7e754fd1c81fd726c22548 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.371 T 18-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CH53_628 c479a28b5c7e754fd1c81fd726c22548 424 Pfam PF03129 Anticodon binding domain 330 418 9.2E-10 T 18-10-2018 IPR004154 Anticodon-binding CH53_628 c479a28b5c7e754fd1c81fd726c22548 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 2.6E-45 T 18-10-2018 CH53_628 c479a28b5c7e754fd1c81fd726c22548 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 2.3E-155 T 18-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CH53_628 c479a28b5c7e754fd1c81fd726c22548 424 PIRSF PIRSF001549 2 421 1.2E-125 T 18-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CH53_628 c479a28b5c7e754fd1c81fd726c22548 424 Gene3D G3DSA:3.30.930.10 2 322 2.7E-118 T 18-10-2018 CH53_628 c479a28b5c7e754fd1c81fd726c22548 424 SUPERFAMILY SSF52954 327 419 3.11E-23 T 18-10-2018 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 Gene3D G3DSA:3.30.2090.10 179 271 1.2E-247 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 Gene3D G3DSA:3.30.2090.10 709 799 1.2E-247 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 SUPERFAMILY SSF82693 559 626 3.61E-7 T 18-10-2018 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 Gene3D G3DSA:3.30.70.1430 559 657 1.2E-247 T 18-10-2018 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 Gene3D G3DSA:3.30.70.1320 136 328 1.2E-247 T 18-10-2018 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 Pfam PF00873 AcrB/AcrD/AcrF family 6 1012 3.3E-160 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 SUPERFAMILY SSF82866 795 1014 3.66E-45 T 18-10-2018 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 Gene3D G3DSA:3.30.70.1430 40 807 1.2E-247 T 18-10-2018 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 Gene3D G3DSA:3.30.70.1440 658 859 1.2E-247 T 18-10-2018 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 5.6E-19 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 5.6E-19 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 5.6E-19 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.6E-19 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 5.6E-19 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 SUPERFAMILY SSF82693 136 326 2.62E-22 T 18-10-2018 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 Gene3D G3DSA:1.20.1640.10 13 507 1.2E-247 T 18-10-2018 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 SUPERFAMILY SSF82866 294 489 5.1E-37 T 18-10-2018 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 SUPERFAMILY SSF82714 184 268 4.97E-12 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 SUPERFAMILY SSF82714 722 792 9.42E-8 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 SUPERFAMILY SSF82693 40 135 3.79E-19 T 18-10-2018 CH53_1152 ec603cb34bf4ce4ff5c07ef6ca081305 1028 Gene3D G3DSA:1.20.1640.10 508 1010 1.2E-247 T 18-10-2018 CH53_3677 aee32349aa6f29124dbcca2a2b96d111 386 Pfam PF00155 Aminotransferase class I and II 55 376 3.6E-31 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_3677 aee32349aa6f29124dbcca2a2b96d111 386 Gene3D G3DSA:3.40.640.10 63 276 3.9E-106 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_3677 aee32349aa6f29124dbcca2a2b96d111 386 Gene3D G3DSA:3.90.1150.10 22 380 3.9E-106 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_3677 aee32349aa6f29124dbcca2a2b96d111 386 SUPERFAMILY SSF53383 6 385 4.03E-84 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_2502 bd7305a143613fad73011eb0fe887666 540 Pfam PF00367 phosphotransferase system, EIIB 455 483 3.4E-12 T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_2502 bd7305a143613fad73011eb0fe887666 540 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 409 510 2.1E-25 T 18-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CH53_2502 bd7305a143613fad73011eb0fe887666 540 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 2 524 5.5E-271 T 18-10-2018 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 CH53_2502 bd7305a143613fad73011eb0fe887666 540 Pfam PF02378 Phosphotransferase system, EIIC 10 346 2.9E-73 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_2502 bd7305a143613fad73011eb0fe887666 540 Gene3D G3DSA:3.30.1360.60 445 527 9.4E-25 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_2502 bd7305a143613fad73011eb0fe887666 540 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 463 480 - T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_2502 bd7305a143613fad73011eb0fe887666 540 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 60 358 3.5E-89 T 18-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CH53_2502 bd7305a143613fad73011eb0fe887666 540 SUPERFAMILY SSF55604 451 524 6.41E-20 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_1465 a9ea688fdcce9ae56c0fdb81b15346ce 129 SUPERFAMILY SSF53137 15 129 7.19E-48 T 18-10-2018 CH53_1465 a9ea688fdcce9ae56c0fdb81b15346ce 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.544 T 18-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CH53_1465 a9ea688fdcce9ae56c0fdb81b15346ce 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.7E-55 T 18-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1465 a9ea688fdcce9ae56c0fdb81b15346ce 129 Pfam PF00411 Ribosomal protein S11 19 128 1.9E-54 T 18-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CH53_1465 a9ea688fdcce9ae56c0fdb81b15346ce 129 PIRSF PIRSF002131 1 129 1.6E-52 T 18-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CH53_1465 a9ea688fdcce9ae56c0fdb81b15346ce 129 Gene3D G3DSA:3.30.420.80 1 129 2.8E-58 T 18-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 CH53_1465 a9ea688fdcce9ae56c0fdb81b15346ce 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 18-10-2018 IPR018102 Ribosomal S11, conserved site CH53_98 84c8944471aa19a21b36f5fd9cabc2fd 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 3.1E-6 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_98 84c8944471aa19a21b36f5fd9cabc2fd 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 3.1E-6 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_98 84c8944471aa19a21b36f5fd9cabc2fd 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 3.1E-6 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_98 84c8944471aa19a21b36f5fd9cabc2fd 197 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 193 4.8E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_98 84c8944471aa19a21b36f5fd9cabc2fd 197 SMART SM00421 139 196 1.1E-11 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_98 84c8944471aa19a21b36f5fd9cabc2fd 197 SUPERFAMILY SSF46894 134 195 1.97E-13 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_98 84c8944471aa19a21b36f5fd9cabc2fd 197 Gene3D G3DSA:1.10.10.10 107 197 1.2E-13 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1593 64963ba64b12269bc187ad02ad427181 337 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 125 5.9E-27 T 18-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CH53_1593 64963ba64b12269bc187ad02ad427181 337 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 1 336 50.604 T 18-10-2018 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 CH53_1593 64963ba64b12269bc187ad02ad427181 337 Gene3D G3DSA:3.30.360.10 144 266 2.1E-107 T 18-10-2018 CH53_1593 64963ba64b12269bc187ad02ad427181 337 SUPERFAMILY SSF55347 133 292 3.27E-17 T 18-10-2018 CH53_1593 64963ba64b12269bc187ad02ad427181 337 Gene3D G3DSA:3.40.50.720 4 318 2.1E-107 T 18-10-2018 CH53_1593 64963ba64b12269bc187ad02ad427181 337 SUPERFAMILY SSF51735 3 154 2.39E-41 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1593 64963ba64b12269bc187ad02ad427181 337 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 239 2.9E-10 T 18-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 CH53_1751 178f1f51f9236d65a966ab05ea68d162 222 Pfam PF04519 Polymer-forming cytoskeletal 87 183 2.7E-18 T 18-10-2018 IPR007607 Bactofilin A/B CH53_170 2ccc049c833476fa0d4f161d88c42089 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.7E-41 T 18-10-2018 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 4.7E-41 T 18-10-2018 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.7E-41 T 18-10-2018 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 4.7E-41 T 18-10-2018 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 4.7E-41 T 18-10-2018 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 SUPERFAMILY SSF51905 1 314 1.21E-54 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_170 2ccc049c833476fa0d4f161d88c42089 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 1.3E-49 T 18-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 18-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.3E-75 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 2.3E-75 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.3E-75 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.3E-75 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 2.3E-75 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.3E-75 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.3E-75 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 2.3E-75 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.3E-75 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 4.0E-125 T 18-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 CH53_170 2ccc049c833476fa0d4f161d88c42089 320 Gene3D G3DSA:3.50.50.60 9 312 6.0E-128 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_170 2ccc049c833476fa0d4f161d88c42089 320 Gene3D G3DSA:3.50.50.60 118 244 6.0E-128 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2091 a7e6ee4430666233f47549f31c9e01e1 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 18-10-2018 CH53_2091 a7e6ee4430666233f47549f31c9e01e1 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.8E-65 T 18-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2091 a7e6ee4430666233f47549f31c9e01e1 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.8E-30 T 18-10-2018 IPR020784 Ribosomal protein L11, N-terminal CH53_2091 a7e6ee4430666233f47549f31c9e01e1 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.1E-24 T 18-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CH53_2091 a7e6ee4430666233f47549f31c9e01e1 142 SUPERFAMILY SSF54747 3 73 2.49E-30 T 18-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CH53_2091 a7e6ee4430666233f47549f31c9e01e1 142 SMART SM00649 9 141 5.8E-85 T 18-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CH53_2091 a7e6ee4430666233f47549f31c9e01e1 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 18-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_2091 a7e6ee4430666233f47549f31c9e01e1 142 Gene3D G3DSA:3.30.1550.10 2 72 2.1E-35 T 18-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CH53_2091 a7e6ee4430666233f47549f31c9e01e1 142 Gene3D G3DSA:1.10.10.250 73 141 1.8E-27 T 18-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CH53_2091 a7e6ee4430666233f47549f31c9e01e1 142 SUPERFAMILY SSF46906 68 141 2.49E-26 T 18-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CH53_2091 a7e6ee4430666233f47549f31c9e01e1 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.869 T 18-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CH53_828 48d6488861fe683a0ca9eaf7cc778fea 495 Gene3D G3DSA:3.30.420.40 2 253 4.1E-77 T 18-10-2018 CH53_828 48d6488861fe683a0ca9eaf7cc778fea 495 SUPERFAMILY SSF53067 6 254 5.7E-75 T 18-10-2018 CH53_828 48d6488861fe683a0ca9eaf7cc778fea 495 SUPERFAMILY SSF53067 257 490 4.75E-60 T 18-10-2018 CH53_828 48d6488861fe683a0ca9eaf7cc778fea 495 Gene3D G3DSA:3.30.420.40 257 493 8.1E-68 T 18-10-2018 CH53_828 48d6488861fe683a0ca9eaf7cc778fea 495 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 446 5.9E-46 T 18-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CH53_828 48d6488861fe683a0ca9eaf7cc778fea 495 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 5.6E-62 T 18-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CH53_828 48d6488861fe683a0ca9eaf7cc778fea 495 PIRSF PIRSF000538 3 493 9.9E-130 T 18-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_308 fdbddf320939177557e7bf7373839225 260 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 215 1.4E-43 T 18-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CH53_308 fdbddf320939177557e7bf7373839225 260 SUPERFAMILY SSF53790 2 238 1.05E-71 T 18-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CH53_308 fdbddf320939177557e7bf7373839225 260 Gene3D G3DSA:3.30.950.10 120 254 1.6E-41 T 18-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CH53_308 fdbddf320939177557e7bf7373839225 260 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 18-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_308 fdbddf320939177557e7bf7373839225 260 Gene3D G3DSA:3.40.1010.10 2 119 3.3E-41 T 18-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CH53_308 fdbddf320939177557e7bf7373839225 260 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 239 4.4E-91 T 18-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_308 fdbddf320939177557e7bf7373839225 260 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 18-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_1294 5001621518a5925ba57033a6981a8f73 391 Pfam PF01018 GTP1/OBG 4 156 1.6E-57 T 18-10-2018 IPR006169 GTP1/OBG domain CH53_1294 5001621518a5925ba57033a6981a8f73 391 SUPERFAMILY SSF52540 151 338 1.05E-47 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1294 5001621518a5925ba57033a6981a8f73 391 Gene3D G3DSA:2.70.210.12 1 158 1.8E-61 T 18-10-2018 IPR036726 GTP1/OBG domain superfamily CH53_1294 5001621518a5925ba57033a6981a8f73 391 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 18-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 CH53_1294 5001621518a5925ba57033a6981a8f73 391 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.005 T 18-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CH53_1294 5001621518a5925ba57033a6981a8f73 391 Gene3D G3DSA:3.40.50.300 159 339 6.4E-53 T 18-10-2018 CH53_1294 5001621518a5925ba57033a6981a8f73 391 PIRSF PIRSF002401 1 378 2.2E-140 T 18-10-2018 IPR035101 GTP-binding protein, Obg-type CH53_1294 5001621518a5925ba57033a6981a8f73 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.0E-34 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_1294 5001621518a5925ba57033a6981a8f73 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.0E-34 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_1294 5001621518a5925ba57033a6981a8f73 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.0E-34 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_1294 5001621518a5925ba57033a6981a8f73 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.0E-34 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_1294 5001621518a5925ba57033a6981a8f73 391 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 5.2E-146 T 18-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CH53_1294 5001621518a5925ba57033a6981a8f73 391 SUPERFAMILY SSF82051 2 157 2.75E-56 T 18-10-2018 IPR036726 GTP1/OBG domain superfamily CH53_1294 5001621518a5925ba57033a6981a8f73 391 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.2E-23 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_3405 338be47489672c1f9f08189f73c20f6c 336 Gene3D G3DSA:3.90.180.10 21 326 4.2E-98 T 18-10-2018 CH53_3405 338be47489672c1f9f08189f73c20f6c 336 SMART SM00829 10 334 1.5E-15 T 18-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CH53_3405 338be47489672c1f9f08189f73c20f6c 336 Pfam PF00107 Zinc-binding dehydrogenase 171 299 1.5E-28 T 18-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CH53_3405 338be47489672c1f9f08189f73c20f6c 336 Gene3D G3DSA:3.40.50.720 142 284 4.2E-98 T 18-10-2018 CH53_3405 338be47489672c1f9f08189f73c20f6c 336 SUPERFAMILY SSF50129 1 165 6.85E-37 T 18-10-2018 IPR011032 GroES-like superfamily CH53_3405 338be47489672c1f9f08189f73c20f6c 336 SUPERFAMILY SSF51735 136 311 1.49E-42 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3405 338be47489672c1f9f08189f73c20f6c 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 128 2.2E-12 T 18-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CH53_2053 5dc634292febc5dfbdcdea6c78e74e0c 284 Pfam PF01738 Dienelactone hydrolase family 50 272 2.0E-73 T 18-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 CH53_2053 5dc634292febc5dfbdcdea6c78e74e0c 284 Gene3D G3DSA:3.40.50.1820 34 272 2.6E-76 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2053 5dc634292febc5dfbdcdea6c78e74e0c 284 SUPERFAMILY SSF53474 39 272 1.18E-50 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_175 f932906930b1dc613070d1bcba95833d 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 732 9.4E-24 T 18-10-2018 IPR019489 Clp ATPase, C-terminal CH53_175 f932906930b1dc613070d1bcba95833d 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 18-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CH53_175 f932906930b1dc613070d1bcba95833d 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.8E-14 T 18-10-2018 IPR004176 Clp, N-terminal CH53_175 f932906930b1dc613070d1bcba95833d 758 SUPERFAMILY SSF52540 436 747 4.53E-78 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_175 f932906930b1dc613070d1bcba95833d 758 SUPERFAMILY SSF81923 1 141 3.92E-58 T 18-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CH53_175 f932906930b1dc613070d1bcba95833d 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 732 0.0 T 18-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 CH53_175 f932906930b1dc613070d1bcba95833d 758 SMART SM00382 205 351 1.2E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_175 f932906930b1dc613070d1bcba95833d 758 SMART SM00382 486 653 2.0E-7 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_175 f932906930b1dc613070d1bcba95833d 758 Gene3D G3DSA:1.10.1780.10 1 143 7.4E-45 T 18-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CH53_175 f932906930b1dc613070d1bcba95833d 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 18-10-2018 IPR028299 ClpA/B, conserved site 2 CH53_175 f932906930b1dc613070d1bcba95833d 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 1.2E-36 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_175 f932906930b1dc613070d1bcba95833d 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 1.2E-36 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_175 f932906930b1dc613070d1bcba95833d 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 1.2E-36 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_175 f932906930b1dc613070d1bcba95833d 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 1.2E-36 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_175 f932906930b1dc613070d1bcba95833d 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 646 1.1E-48 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CH53_175 f932906930b1dc613070d1bcba95833d 758 Gene3D G3DSA:3.40.50.300 157 349 1.2E-63 T 18-10-2018 CH53_175 f932906930b1dc613070d1bcba95833d 758 Gene3D G3DSA:1.10.8.60 351 437 2.4E-35 T 18-10-2018 CH53_175 f932906930b1dc613070d1bcba95833d 758 SUPERFAMILY SSF52540 168 425 1.26E-68 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_175 f932906930b1dc613070d1bcba95833d 758 Gene3D G3DSA:3.40.50.300 438 651 3.5E-79 T 18-10-2018 CH53_175 f932906930b1dc613070d1bcba95833d 758 Gene3D G3DSA:1.10.8.60 652 757 2.8E-35 T 18-10-2018 CH53_175 f932906930b1dc613070d1bcba95833d 758 SMART SM01086 652 743 8.0E-34 T 18-10-2018 IPR019489 Clp ATPase, C-terminal CH53_175 f932906930b1dc613070d1bcba95833d 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 341 1.1E-12 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CH53_3743 1136cc8727c8226481834b8dbb4d8c61 190 Pfam PF05962 HutD 13 167 6.4E-53 T 18-10-2018 IPR010282 Uncharacterised protein family HutD/Ves CH53_3743 1136cc8727c8226481834b8dbb4d8c61 190 Gene3D G3DSA:2.60.120.10 16 116 1.2E-36 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_3743 1136cc8727c8226481834b8dbb4d8c61 190 SUPERFAMILY SSF51182 1 188 8.63E-56 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_3743 1136cc8727c8226481834b8dbb4d8c61 190 Gene3D G3DSA:2.60.120.10 117 178 1.2E-36 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_1315 4416bea4a40d52d329ba70620fec7032 70 Gene3D G3DSA:3.30.1910.10 1 64 7.6E-27 T 18-10-2018 CH53_1315 4416bea4a40d52d329ba70620fec7032 70 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 3.0E-30 T 18-10-2018 IPR009491 Protein of unknown function DUF1107 CH53_1315 4416bea4a40d52d329ba70620fec7032 70 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 9.4E-30 T 18-10-2018 IPR009491 Protein of unknown function DUF1107 CH53_633 c9e22ae536f65b04f6da98119b17b175 142 SUPERFAMILY SSF54919 1 139 9.3E-58 T 18-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CH53_633 c9e22ae536f65b04f6da98119b17b175 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.969 T 18-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CH53_633 c9e22ae536f65b04f6da98119b17b175 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.9E-55 T 18-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CH53_633 c9e22ae536f65b04f6da98119b17b175 142 Gene3D G3DSA:3.30.70.141 1 141 5.0E-58 T 18-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CH53_633 c9e22ae536f65b04f6da98119b17b175 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.1E-39 T 18-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CH53_633 c9e22ae536f65b04f6da98119b17b175 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.1E-39 T 18-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CH53_633 c9e22ae536f65b04f6da98119b17b175 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.1E-39 T 18-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CH53_633 c9e22ae536f65b04f6da98119b17b175 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.1E-39 T 18-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CH53_633 c9e22ae536f65b04f6da98119b17b175 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.1E-39 T 18-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CH53_633 c9e22ae536f65b04f6da98119b17b175 142 SMART SM00562 3 140 5.1E-83 T 18-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CH53_633 c9e22ae536f65b04f6da98119b17b175 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 18-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_2863 9e298a55664d30f991e0607e02850b19 784 SUPERFAMILY SSF52540 313 586 5.21E-51 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2863 9e298a55664d30f991e0607e02850b19 784 Gene3D G3DSA:3.40.50.300 314 490 7.1E-61 T 18-10-2018 CH53_2863 9e298a55664d30f991e0607e02850b19 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.077 T 18-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CH53_2863 9e298a55664d30f991e0607e02850b19 784 SUPERFAMILY SSF54211 595 771 3.07E-58 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_2863 9e298a55664d30f991e0607e02850b19 784 Gene3D G3DSA:1.10.8.60 491 584 5.1E-33 T 18-10-2018 CH53_2863 9e298a55664d30f991e0607e02850b19 784 Gene3D G3DSA:1.20.58.1480 120 245 2.5E-47 T 18-10-2018 CH53_2863 9e298a55664d30f991e0607e02850b19 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 2.2E-44 T 18-10-2018 IPR003111 Lon, substrate-binding domain CH53_2863 9e298a55664d30f991e0607e02850b19 784 SMART SM00464 10 202 7.1E-84 T 18-10-2018 IPR003111 Lon, substrate-binding domain CH53_2863 9e298a55664d30f991e0607e02850b19 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.6E-17 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CH53_2863 9e298a55664d30f991e0607e02850b19 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 18-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CH53_2863 9e298a55664d30f991e0607e02850b19 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 1.7E-95 T 18-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CH53_2863 9e298a55664d30f991e0607e02850b19 784 PIRSF PIRSF001174 1 775 0.0 T 18-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CH53_2863 9e298a55664d30f991e0607e02850b19 784 Gene3D G3DSA:3.30.230.10 585 772 3.7E-86 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH53_2863 9e298a55664d30f991e0607e02850b19 784 SMART SM00382 348 492 2.8E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2863 9e298a55664d30f991e0607e02850b19 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 18-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CH53_2863 9e298a55664d30f991e0607e02850b19 784 Gene3D G3DSA:2.30.130.40 1 118 4.2E-38 T 18-10-2018 CH53_2863 9e298a55664d30f991e0607e02850b19 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 3.1E-56 T 18-10-2018 CH53_2863 9e298a55664d30f991e0607e02850b19 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 3.1E-56 T 18-10-2018 CH53_2863 9e298a55664d30f991e0607e02850b19 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 3.1E-56 T 18-10-2018 CH53_2863 9e298a55664d30f991e0607e02850b19 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 3.1E-56 T 18-10-2018 CH53_2863 9e298a55664d30f991e0607e02850b19 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 3.1E-56 T 18-10-2018 CH53_2863 9e298a55664d30f991e0607e02850b19 784 SUPERFAMILY SSF88697 10 201 1.22E-52 T 18-10-2018 IPR015947 PUA-like superfamily CH53_739 10c8a40e80a3031a70f56826d54eb6e1 148 Pfam PF00581 Rhodanese-like domain 38 122 6.4E-10 T 18-10-2018 IPR001763 Rhodanese-like domain CH53_739 10c8a40e80a3031a70f56826d54eb6e1 148 ProSitePatterns PS00380 Rhodanese signature 1. 55 66 - T 18-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 CH53_739 10c8a40e80a3031a70f56826d54eb6e1 148 SUPERFAMILY SSF52821 16 130 3.67E-23 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily CH53_739 10c8a40e80a3031a70f56826d54eb6e1 148 Gene3D G3DSA:3.40.250.10 12 129 1.7E-25 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily CH53_739 10c8a40e80a3031a70f56826d54eb6e1 148 SMART SM00450 30 127 3.4E-9 T 18-10-2018 IPR001763 Rhodanese-like domain CH53_409 2e44a3eb067c21b1efe1164005382b76 422 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 52 75 - T 18-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CH53_409 2e44a3eb067c21b1efe1164005382b76 422 Gene3D G3DSA:3.40.1190.10 1 293 4.2E-98 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CH53_409 2e44a3eb067c21b1efe1164005382b76 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 419 3.0E-103 T 18-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CH53_409 2e44a3eb067c21b1efe1164005382b76 422 SUPERFAMILY SSF53623 13 290 1.28E-85 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CH53_409 2e44a3eb067c21b1efe1164005382b76 422 PIRSF PIRSF001563 6 422 8.0E-111 T 18-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CH53_409 2e44a3eb067c21b1efe1164005382b76 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 18-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CH53_409 2e44a3eb067c21b1efe1164005382b76 422 Gene3D G3DSA:3.90.190.20 294 421 5.5E-37 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CH53_409 2e44a3eb067c21b1efe1164005382b76 422 Pfam PF08245 Mur ligase middle domain 54 197 5.4E-9 T 18-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CH53_409 2e44a3eb067c21b1efe1164005382b76 422 SUPERFAMILY SSF53244 292 420 2.49E-33 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CH53_409 2e44a3eb067c21b1efe1164005382b76 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 293 343 7.0E-7 T 18-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CH53_315 8175282057b091ae13decf31514fc8d8 105 Pfam PF14330 Domain of unknown function (DUF4387) 6 102 9.6E-39 T 18-10-2018 IPR025496 Protein of unknown function DUF4387 CH53_3002 93c06b63f0dbfe52a8829906ee424779 483 SMART SM00235 64 246 5.1E-12 T 18-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 CH53_3002 93c06b63f0dbfe52a8829906ee424779 483 Gene3D G3DSA:3.40.390.10 36 266 8.5E-172 T 18-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 CH53_3002 93c06b63f0dbfe52a8829906ee424779 483 SUPERFAMILY SSF55486 20 260 6.15E-55 T 18-10-2018 CH53_3002 93c06b63f0dbfe52a8829906ee424779 483 Gene3D G3DSA:2.150.10.10 267 474 8.5E-172 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CH53_3002 93c06b63f0dbfe52a8829906ee424779 483 PIRSF PIRSF001205 2 483 6.4E-192 T 18-10-2018 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 CH53_3002 93c06b63f0dbfe52a8829906ee424779 483 SUPERFAMILY SSF51120 263 481 1.83E-42 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CH53_3002 93c06b63f0dbfe52a8829906ee424779 483 Pfam PF08548 Peptidase M10 serralysin C terminal 262 483 1.4E-81 T 18-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 CH53_3002 93c06b63f0dbfe52a8829906ee424779 483 PRINTS PR00313 NodO calcium binding signature 344 355 8.4E-13 T 18-10-2018 CH53_3002 93c06b63f0dbfe52a8829906ee424779 483 PRINTS PR00313 NodO calcium binding signature 383 392 8.4E-13 T 18-10-2018 CH53_3002 93c06b63f0dbfe52a8829906ee424779 483 PRINTS PR00313 NodO calcium binding signature 365 373 8.4E-13 T 18-10-2018 CH53_3002 93c06b63f0dbfe52a8829906ee424779 483 PRINTS PR00313 NodO calcium binding signature 374 382 8.4E-13 T 18-10-2018 CH53_3002 93c06b63f0dbfe52a8829906ee424779 483 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 370 388 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site CH53_3002 93c06b63f0dbfe52a8829906ee424779 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 364 381 6.5E-4 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CH53_3002 93c06b63f0dbfe52a8829906ee424779 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 346 361 0.38 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CH53_3002 93c06b63f0dbfe52a8829906ee424779 483 Pfam PF00413 Matrixin 101 204 3.1E-7 T 18-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 CH53_2620 9900c722bca086f3c9b58506aa4aac5c 365 Gene3D G3DSA:4.10.1250.10 232 275 4.7E-26 T 18-10-2018 CH53_2620 9900c722bca086f3c9b58506aa4aac5c 365 Gene3D G3DSA:3.30.70.1400 51 138 1.4E-87 T 18-10-2018 CH53_2620 9900c722bca086f3c9b58506aa4aac5c 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 43.499 T 18-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CH53_2620 9900c722bca086f3c9b58506aa4aac5c 365 Gene3D G3DSA:3.30.1360.120 6 231 1.4E-87 T 18-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CH53_2620 9900c722bca086f3c9b58506aa4aac5c 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 358 3.3E-152 T 18-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CH53_2620 9900c722bca086f3c9b58506aa4aac5c 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 8.2E-82 T 18-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain CH53_2620 9900c722bca086f3c9b58506aa4aac5c 365 Gene3D G3DSA:2.40.30.110 277 365 1.3E-32 T 18-10-2018 CH53_2620 9900c722bca086f3c9b58506aa4aac5c 365 SUPERFAMILY SSF101790 272 360 1.24E-24 T 18-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CH53_2620 9900c722bca086f3c9b58506aa4aac5c 365 SUPERFAMILY SSF103025 3 277 1.27E-90 T 18-10-2018 CH53_2620 9900c722bca086f3c9b58506aa4aac5c 365 PIRSF PIRSF006487 1 362 1.9E-79 T 18-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CH53_2620 9900c722bca086f3c9b58506aa4aac5c 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 353 1.2E-17 T 18-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 SUPERFAMILY SSF51604 143 427 1.7E-126 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 Gene3D G3DSA:3.30.390.10 3 127 1.9E-54 T 18-10-2018 IPR029017 Enolase-like, N-terminal CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 ProSitePatterns PS00164 Enolase signature. 339 352 - T 18-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 4.9E-205 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 SMART SM01192 143 430 8.0E-212 T 18-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 PIRSF PIRSF001400 1 429 1.1E-190 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 SUPERFAMILY SSF54826 3 138 5.89E-56 T 18-10-2018 CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 2.6E-139 T 18-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 Pfam PF03952 Enolase, N-terminal domain 4 134 4.5E-58 T 18-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 SMART SM01193 4 134 1.5E-92 T 18-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 Hamap MF_00318 Enolase [eno]. 2 416 44.003 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 PRINTS PR00148 Enolase signature 107 123 1.2E-44 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 PRINTS PR00148 Enolase signature 37 51 1.2E-44 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 PRINTS PR00148 Enolase signature 165 178 1.2E-44 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 PRINTS PR00148 Enolase signature 368 385 1.2E-44 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 PRINTS PR00148 Enolase signature 316 327 1.2E-44 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 PRINTS PR00148 Enolase signature 339 353 1.2E-44 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CH53_949 f163fb2d368aba8b8e5f4894586492f2 431 Gene3D G3DSA:3.20.20.120 128 431 2.5E-136 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CH53_469 fb9252842b922f3166a1372e2ea37c13 184 SUPERFAMILY SSF81342 5 180 1.73E-37 T 18-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CH53_469 fb9252842b922f3166a1372e2ea37c13 184 Pfam PF01292 Prokaryotic cytochrome b561 10 180 3.6E-25 T 18-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CH53_4373 833693453e14ed4c640a94456e444f02 128 Gene3D G3DSA:1.10.10.60 1 60 7.2E-19 T 18-10-2018 CH53_4373 833693453e14ed4c640a94456e444f02 128 SUPERFAMILY SSF46689 60 110 4.93E-14 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_4373 833693453e14ed4c640a94456e444f02 128 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 61 103 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CH53_4373 833693453e14ed4c640a94456e444f02 128 Pfam PF12833 Helix-turn-helix domain 30 108 4.2E-23 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_4373 833693453e14ed4c640a94456e444f02 128 Gene3D G3DSA:1.10.10.60 61 119 8.4E-17 T 18-10-2018 CH53_4373 833693453e14ed4c640a94456e444f02 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 1.4E-7 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_4373 833693453e14ed4c640a94456e444f02 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 1.4E-7 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_4373 833693453e14ed4c640a94456e444f02 128 SMART SM00342 24 107 2.2E-26 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_4373 833693453e14ed4c640a94456e444f02 128 SUPERFAMILY SSF46689 11 58 2.06E-7 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1324 3f4b75464bdfc56f443a4f9c474a954f 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 18-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1324 3f4b75464bdfc56f443a4f9c474a954f 75 Gene3D G3DSA:4.10.640.10 20 75 1.9E-28 T 18-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1324 3f4b75464bdfc56f443a4f9c474a954f 75 Pfam PF01084 Ribosomal protein S18 19 68 4.8E-24 T 18-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1324 3f4b75464bdfc56f443a4f9c474a954f 75 SUPERFAMILY SSF46911 3 74 1.07E-28 T 18-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1324 3f4b75464bdfc56f443a4f9c474a954f 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 1.0E-22 T 18-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1324 3f4b75464bdfc56f443a4f9c474a954f 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 2.3E-36 T 18-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1324 3f4b75464bdfc56f443a4f9c474a954f 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.759 T 18-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1324 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-17 T 18-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1324 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-17 T 18-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1324 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-17 T 18-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1324 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-17 T 18-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2735 478798ce75202c6e57b11effb8022590 1160 SUPERFAMILY SSF89550 6 263 7.65E-18 T 18-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CH53_2735 478798ce75202c6e57b11effb8022590 1160 Pfam PF01336 OB-fold nucleic acid binding domain 1000 1071 1.4E-7 T 18-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CH53_2735 478798ce75202c6e57b11effb8022590 1160 Pfam PF02811 PHP domain 8 171 3.9E-45 T 18-10-2018 IPR004013 PHP domain GO:0003824 CH53_2735 478798ce75202c6e57b11effb8022590 1160 SMART SM00481 7 74 1.4E-29 T 18-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CH53_2735 478798ce75202c6e57b11effb8022590 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 3.5E-25 T 18-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_2735 478798ce75202c6e57b11effb8022590 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 18-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_2735 478798ce75202c6e57b11effb8022590 1160 Gene3D G3DSA:2.40.50.140 982 1074 2.0E-5 T 18-10-2018 CH53_2735 478798ce75202c6e57b11effb8022590 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 734 6.9E-176 T 18-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_2735 478798ce75202c6e57b11effb8022590 1160 Gene3D G3DSA:3.20.20.140 1 270 2.8E-94 T 18-10-2018 CH53_2735 478798ce75202c6e57b11effb8022590 1160 Gene3D G3DSA:1.10.10.1600 433 510 2.3E-34 T 18-10-2018 CH53_565 1aa7e30703a79458c157d35610215cc1 375 Gene3D G3DSA:3.40.630.10 8 360 1.8E-125 T 18-10-2018 CH53_565 1aa7e30703a79458c157d35610215cc1 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 18-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CH53_565 1aa7e30703a79458c157d35610215cc1 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 5.4E-43 T 18-10-2018 IPR002933 Peptidase M20 GO:0016787 CH53_565 1aa7e30703a79458c157d35610215cc1 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 1.4E-176 T 18-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CH53_565 1aa7e30703a79458c157d35610215cc1 375 Pfam PF07687 Peptidase dimerisation domain 175 282 7.6E-25 T 18-10-2018 IPR011650 Peptidase M20, dimerisation domain CH53_565 1aa7e30703a79458c157d35610215cc1 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.435 T 18-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CH53_565 1aa7e30703a79458c157d35610215cc1 375 SUPERFAMILY SSF53187 5 373 2.88E-64 T 18-10-2018 CH53_565 1aa7e30703a79458c157d35610215cc1 375 Gene3D G3DSA:3.30.70.360 179 292 1.8E-125 T 18-10-2018 CH53_565 1aa7e30703a79458c157d35610215cc1 375 SUPERFAMILY SSF55031 179 286 4.93E-28 T 18-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CH53_3203 033807ad2fa885b5c70f0f69b716170d 451 SUPERFAMILY SSF52540 75 361 2.8E-73 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3203 033807ad2fa885b5c70f0f69b716170d 451 Pfam PF00271 Helicase conserved C-terminal domain 235 339 3.5E-26 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_3203 033807ad2fa885b5c70f0f69b716170d 451 SMART SM00490 259 340 2.3E-32 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_3203 033807ad2fa885b5c70f0f69b716170d 451 Pfam PF00270 DEAD/DEAH box helicase 25 195 2.0E-49 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CH53_3203 033807ad2fa885b5c70f0f69b716170d 451 Gene3D G3DSA:3.40.50.300 215 394 2.6E-49 T 18-10-2018 CH53_3203 033807ad2fa885b5c70f0f69b716170d 451 SMART SM00487 20 223 6.8E-58 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH53_3203 033807ad2fa885b5c70f0f69b716170d 451 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 18-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CH53_3203 033807ad2fa885b5c70f0f69b716170d 451 Gene3D G3DSA:3.40.50.300 1 211 1.4E-75 T 18-10-2018 CH53_3203 033807ad2fa885b5c70f0f69b716170d 451 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 450 51.209 T 18-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 CH53_2604 cd8b456159346a898b0811025034927c 664 SUPERFAMILY SSF52922 533 664 3.01E-44 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CH53_2604 cd8b456159346a898b0811025034927c 664 SUPERFAMILY SSF52518 333 526 8.99E-70 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_2604 cd8b456159346a898b0811025034927c 664 Pfam PF02780 Transketolase, C-terminal domain 545 655 8.3E-19 T 18-10-2018 IPR033248 Transketolase, C-terminal domain CH53_2604 cd8b456159346a898b0811025034927c 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 1.3E-170 T 18-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CH53_2604 cd8b456159346a898b0811025034927c 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 1.1E-46 T 18-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CH53_2604 cd8b456159346a898b0811025034927c 664 Gene3D G3DSA:3.40.50.920 538 664 1.4E-43 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CH53_2604 cd8b456159346a898b0811025034927c 664 SMART SM00861 355 525 2.9E-68 T 18-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CH53_2604 cd8b456159346a898b0811025034927c 664 Gene3D G3DSA:3.40.50.970 327 537 2.5E-86 T 18-10-2018 CH53_2604 cd8b456159346a898b0811025034927c 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 18-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CH53_2604 cd8b456159346a898b0811025034927c 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 18-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CH53_2604 cd8b456159346a898b0811025034927c 664 Gene3D G3DSA:3.40.50.970 1 326 1.6E-135 T 18-10-2018 CH53_2604 cd8b456159346a898b0811025034927c 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 18-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CH53_2604 cd8b456159346a898b0811025034927c 664 SUPERFAMILY SSF52518 5 321 1.04E-120 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_3511 07f0d6e0849b5ccad4bbe94bc077205e 247 SUPERFAMILY SSF49354 20 148 4.97E-43 T 18-10-2018 IPR008962 PapD-like superfamily CH53_3511 07f0d6e0849b5ccad4bbe94bc077205e 247 Gene3D G3DSA:2.60.40.10 152 247 2.2E-18 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_3511 07f0d6e0849b5ccad4bbe94bc077205e 247 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 170 239 2.3E-14 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_3511 07f0d6e0849b5ccad4bbe94bc077205e 247 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 148 2.4E-45 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_3511 07f0d6e0849b5ccad4bbe94bc077205e 247 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 101 118 - T 18-10-2018 IPR018046 Pili assembly chaperone, conserved site CH53_3511 07f0d6e0849b5ccad4bbe94bc077205e 247 PRINTS PR00969 Pili chaperone signature 102 119 9.7E-34 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3511 07f0d6e0849b5ccad4bbe94bc077205e 247 PRINTS PR00969 Pili chaperone signature 74 95 9.7E-34 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3511 07f0d6e0849b5ccad4bbe94bc077205e 247 PRINTS PR00969 Pili chaperone signature 130 145 9.7E-34 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3511 07f0d6e0849b5ccad4bbe94bc077205e 247 PRINTS PR00969 Pili chaperone signature 25 34 9.7E-34 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3511 07f0d6e0849b5ccad4bbe94bc077205e 247 PRINTS PR00969 Pili chaperone signature 165 180 9.7E-34 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3511 07f0d6e0849b5ccad4bbe94bc077205e 247 Gene3D G3DSA:2.60.40.10 26 149 8.7E-44 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_3511 07f0d6e0849b5ccad4bbe94bc077205e 247 SUPERFAMILY SSF49584 142 243 1.24E-16 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_418 768ebcc48f96534153a97f4aaeacd99f 483 Pfam PF00155 Aminotransferase class I and II 146 473 3.0E-28 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_418 768ebcc48f96534153a97f4aaeacd99f 483 Gene3D G3DSA:3.40.640.10 153 371 2.0E-115 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_418 768ebcc48f96534153a97f4aaeacd99f 483 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 9.3E-7 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_418 768ebcc48f96534153a97f4aaeacd99f 483 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 9.3E-7 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_418 768ebcc48f96534153a97f4aaeacd99f 483 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 1.6E-18 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_418 768ebcc48f96534153a97f4aaeacd99f 483 SUPERFAMILY SSF46785 6 80 1.7E-22 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_418 768ebcc48f96534153a97f4aaeacd99f 483 Gene3D G3DSA:1.10.10.10 4 77 5.5E-24 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_418 768ebcc48f96534153a97f4aaeacd99f 483 Gene3D G3DSA:3.90.1150.10 116 478 2.0E-115 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_418 768ebcc48f96534153a97f4aaeacd99f 483 SMART SM00345 17 76 2.2E-19 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_418 768ebcc48f96534153a97f4aaeacd99f 483 SUPERFAMILY SSF53383 95 480 3.38E-97 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_2566 88a168f3a076bf8d8dda57338df8d380 352 Gene3D G3DSA:3.40.50.1820 254 351 1.3E-5 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2566 88a168f3a076bf8d8dda57338df8d380 352 SUPERFAMILY SSF53474 39 332 1.08E-26 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2566 88a168f3a076bf8d8dda57338df8d380 352 Gene3D G3DSA:3.40.50.1820 14 234 3.1E-50 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2566 88a168f3a076bf8d8dda57338df8d380 352 PIRSF PIRSF029171 1 351 1.6E-101 T 18-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 CH53_2566 88a168f3a076bf8d8dda57338df8d380 352 Pfam PF03583 Secretory lipase 84 251 3.1E-15 T 18-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 CH53_4015 e61ae94f2e8cf78b304623e1b981d465 309 Hamap MF_01987 Ribokinase [rbsK]. 1 301 25.168 T 18-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CH53_4015 e61ae94f2e8cf78b304623e1b981d465 309 SUPERFAMILY SSF53613 1 302 1.71E-81 T 18-10-2018 IPR029056 Ribokinase-like CH53_4015 e61ae94f2e8cf78b304623e1b981d465 309 Pfam PF00294 pfkB family carbohydrate kinase 2 294 1.6E-60 T 18-10-2018 IPR011611 Carbohydrate kinase PfkB CH53_4015 e61ae94f2e8cf78b304623e1b981d465 309 Gene3D G3DSA:3.40.1190.20 1 306 1.1E-97 T 18-10-2018 IPR029056 Ribokinase-like CH53_4015 e61ae94f2e8cf78b304623e1b981d465 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 3 295 3.2E-109 T 18-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CH53_4015 e61ae94f2e8cf78b304623e1b981d465 309 PRINTS PR00990 Ribokinase signature 32 51 2.7E-28 T 18-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CH53_4015 e61ae94f2e8cf78b304623e1b981d465 309 PRINTS PR00990 Ribokinase signature 217 228 2.7E-28 T 18-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CH53_4015 e61ae94f2e8cf78b304623e1b981d465 309 PRINTS PR00990 Ribokinase signature 104 117 2.7E-28 T 18-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CH53_4015 e61ae94f2e8cf78b304623e1b981d465 309 PRINTS PR00990 Ribokinase signature 5 26 2.7E-28 T 18-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CH53_4015 e61ae94f2e8cf78b304623e1b981d465 309 PRINTS PR00990 Ribokinase signature 173 188 2.7E-28 T 18-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CH53_1361 ab858f4ca2a67f83fdaabff09711df27 188 Gene3D G3DSA:2.40.50.140 130 188 3.6E-28 T 18-10-2018 CH53_1361 ab858f4ca2a67f83fdaabff09711df27 188 SMART SM01185 69 123 1.9E-24 T 18-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CH53_1361 ab858f4ca2a67f83fdaabff09711df27 188 SUPERFAMILY SSF50249 130 187 1.23E-18 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_1361 ab858f4ca2a67f83fdaabff09711df27 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 50.187 T 18-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CH53_1361 ab858f4ca2a67f83fdaabff09711df27 188 SUPERFAMILY SSF50104 6 63 1.02E-17 T 18-10-2018 IPR008991 Translation protein SH3-like domain superfamily CH53_1361 ab858f4ca2a67f83fdaabff09711df27 188 PIRSF PIRSF005901 2 188 1.8E-66 T 18-10-2018 IPR020599 Translation elongation factor P/YeiP CH53_1361 ab858f4ca2a67f83fdaabff09711df27 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 18-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site CH53_1361 ab858f4ca2a67f83fdaabff09711df27 188 Gene3D G3DSA:2.40.50.140 66 129 1.5E-29 T 18-10-2018 CH53_1361 ab858f4ca2a67f83fdaabff09711df27 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 2.1E-76 T 18-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CH53_1361 ab858f4ca2a67f83fdaabff09711df27 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 3.9E-24 T 18-10-2018 IPR013185 Translation elongation factor, KOW-like CH53_1361 ab858f4ca2a67f83fdaabff09711df27 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 5.6E-22 T 18-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CH53_1361 ab858f4ca2a67f83fdaabff09711df27 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 6.2E-26 T 18-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CH53_1361 ab858f4ca2a67f83fdaabff09711df27 188 SUPERFAMILY SSF50249 67 128 3.98E-18 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_1361 ab858f4ca2a67f83fdaabff09711df27 188 Gene3D G3DSA:2.30.30.30 1 65 1.2E-27 T 18-10-2018 IPR014722 Ribosomal protein L2, domain 2 CH53_1361 ab858f4ca2a67f83fdaabff09711df27 188 SMART SM00841 131 186 9.3E-33 T 18-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CH53_515 9b7acf1a5e7bbd0f87d33de20b1c8c97 471 SUPERFAMILY SSF48163 299 461 4.84E-45 T 18-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CH53_515 9b7acf1a5e7bbd0f87d33de20b1c8c97 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_515 9b7acf1a5e7bbd0f87d33de20b1c8c97 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 4.9E-27 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CH53_515 9b7acf1a5e7bbd0f87d33de20b1c8c97 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 4.9E-27 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CH53_515 9b7acf1a5e7bbd0f87d33de20b1c8c97 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 4.9E-27 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CH53_515 9b7acf1a5e7bbd0f87d33de20b1c8c97 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 4.9E-27 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CH53_515 9b7acf1a5e7bbd0f87d33de20b1c8c97 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 4.9E-27 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CH53_515 9b7acf1a5e7bbd0f87d33de20b1c8c97 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 462 2.9E-202 T 18-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CH53_515 9b7acf1a5e7bbd0f87d33de20b1c8c97 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 9.2E-117 T 18-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 CH53_515 9b7acf1a5e7bbd0f87d33de20b1c8c97 471 SUPERFAMILY SSF52374 3 298 4.02E-113 T 18-10-2018 CH53_515 9b7acf1a5e7bbd0f87d33de20b1c8c97 471 Gene3D G3DSA:1.10.10.350 367 470 1.2E-24 T 18-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CH53_515 9b7acf1a5e7bbd0f87d33de20b1c8c97 471 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 32.954 T 18-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CH53_515 9b7acf1a5e7bbd0f87d33de20b1c8c97 471 Gene3D G3DSA:3.40.50.620 1 313 3.7E-135 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_2445 fdbb515d8c62a7eaae51ff147e45abee 508 SUPERFAMILY SSF56954 7 497 4.05E-74 T 18-10-2018 CH53_2445 fdbb515d8c62a7eaae51ff147e45abee 508 Gene3D G3DSA:1.20.1600.10 66 502 6.9E-72 T 18-10-2018 CH53_2445 fdbb515d8c62a7eaae51ff147e45abee 508 Pfam PF02321 Outer membrane efflux protein 307 495 4.8E-21 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CH53_2445 fdbb515d8c62a7eaae51ff147e45abee 508 Pfam PF02321 Outer membrane efflux protein 87 280 1.0E-26 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CH53_2445 fdbb515d8c62a7eaae51ff147e45abee 508 PIRSF PIRSF001892 15 504 4.6E-165 T 18-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 323 335 - T 18-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 SMART SM00382 618 769 1.7E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 SMART SM00382 227 368 2.7E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 862 0.0 T 18-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 232 363 2.7E-10 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 Gene3D G3DSA:3.40.50.300 178 371 7.8E-61 T 18-10-2018 CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 SUPERFAMILY SSF52540 567 862 1.32E-64 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 652 670 - T 18-10-2018 IPR028299 ClpA/B, conserved site 2 CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 SMART SM01086 790 881 4.6E-13 T 18-10-2018 IPR019489 Clp ATPase, C-terminal CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 790 863 7.3E-15 T 18-10-2018 IPR019489 Clp ATPase, C-terminal CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 Gene3D G3DSA:1.10.8.60 790 886 1.1E-13 T 18-10-2018 CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 Pfam PF07724 AAA domain (Cdc48 subfamily) 618 784 4.2E-38 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 SUPERFAMILY SSF52540 189 527 1.9E-71 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 Gene3D G3DSA:1.10.1780.10 1 160 4.5E-38 T 18-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 SUPERFAMILY SSF81923 15 124 1.26E-16 T 18-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 Gene3D G3DSA:3.40.50.300 571 788 2.4E-64 T 18-10-2018 CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 729 743 1.1E-32 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 696 714 1.1E-32 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 622 640 1.1E-32 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 667 685 1.1E-32 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_2543 45d7253fc21891f05c9be0e20c771ea2 890 Gene3D G3DSA:3.40.50.300 373 565 2.6E-48 T 18-10-2018 CH53_3854 05d14b4d8756b51febc7178d103a6a08 348 Gene3D G3DSA:3.90.650.10 164 347 3.7E-53 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CH53_3854 05d14b4d8756b51febc7178d103a6a08 348 PIRSF PIRSF036407 1 347 5.0E-119 T 18-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CH53_3854 05d14b4d8756b51febc7178d103a6a08 348 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 45.511 T 18-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CH53_3854 05d14b4d8756b51febc7178d103a6a08 348 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 2.3E-137 T 18-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CH53_3854 05d14b4d8756b51febc7178d103a6a08 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 337 5.3E-29 T 18-10-2018 IPR010918 PurM-like, C-terminal domain CH53_3854 05d14b4d8756b51febc7178d103a6a08 348 Gene3D G3DSA:3.30.1330.10 2 162 6.2E-48 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CH53_3854 05d14b4d8756b51febc7178d103a6a08 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 1.8E-18 T 18-10-2018 IPR016188 PurM-like, N-terminal domain CH53_3854 05d14b4d8756b51febc7178d103a6a08 348 SUPERFAMILY SSF56042 164 335 4.78E-50 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CH53_3854 05d14b4d8756b51febc7178d103a6a08 348 SUPERFAMILY SSF55326 7 160 5.83E-41 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CH53_863 163ba729704b470d1732c3afa97fb959 388 SUPERFAMILY SSF53822 6 368 6.73E-80 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_863 163ba729704b470d1732c3afa97fb959 388 Gene3D G3DSA:3.40.50.2300 122 357 3.4E-119 T 18-10-2018 CH53_863 163ba729704b470d1732c3afa97fb959 388 Gene3D G3DSA:3.40.50.2300 9 338 3.4E-119 T 18-10-2018 CH53_863 163ba729704b470d1732c3afa97fb959 388 Pfam PF13433 Periplasmic binding protein domain 8 369 2.3E-127 T 18-10-2018 CH53_863 163ba729704b470d1732c3afa97fb959 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 3.1E-8 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CH53_863 163ba729704b470d1732c3afa97fb959 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 315 330 3.1E-8 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CH53_863 163ba729704b470d1732c3afa97fb959 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 66 3.1E-8 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CH53_863 163ba729704b470d1732c3afa97fb959 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 237 255 3.1E-8 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CH53_3949 1abf1845bd5463fa28c0a0ac77b5e9f6 349 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 238 1.0E-12 T 18-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 CH53_3949 1abf1845bd5463fa28c0a0ac77b5e9f6 349 SUPERFAMILY SSF51735 3 196 2.32E-50 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3949 1abf1845bd5463fa28c0a0ac77b5e9f6 349 Gene3D G3DSA:3.40.50.720 5 316 7.7E-137 T 18-10-2018 CH53_3949 1abf1845bd5463fa28c0a0ac77b5e9f6 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 4.4E-24 T 18-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CH53_3949 1abf1845bd5463fa28c0a0ac77b5e9f6 349 Gene3D G3DSA:3.30.360.10 127 330 7.7E-137 T 18-10-2018 CH53_842 94ae62b2f2982b096337e6ee815f3d98 439 Pfam PF07690 Major Facilitator Superfamily 36 394 3.6E-20 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_842 94ae62b2f2982b096337e6ee815f3d98 439 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 27 433 7.6E-183 T 18-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 CH53_842 94ae62b2f2982b096337e6ee815f3d98 439 Gene3D G3DSA:1.20.1250.20 246 436 4.0E-54 T 18-10-2018 CH53_842 94ae62b2f2982b096337e6ee815f3d98 439 Gene3D G3DSA:1.20.1250.20 25 245 9.4E-69 T 18-10-2018 CH53_842 94ae62b2f2982b096337e6ee815f3d98 439 SUPERFAMILY SSF103473 21 431 2.75E-41 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_3248 2ee243143533b5c259d74e9375dd589a 175 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 163 174 2.4E-35 T 18-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CH53_3248 2ee243143533b5c259d74e9375dd589a 175 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 87 110 2.4E-35 T 18-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CH53_3248 2ee243143533b5c259d74e9375dd589a 175 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 46 58 2.4E-35 T 18-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CH53_3248 2ee243143533b5c259d74e9375dd589a 175 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 136 157 2.4E-35 T 18-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CH53_3248 2ee243143533b5c259d74e9375dd589a 175 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 47 55 - T 18-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CH53_3248 2ee243143533b5c259d74e9375dd589a 175 Pfam PF13505 Outer membrane protein beta-barrel domain 9 175 1.3E-22 T 18-10-2018 IPR027385 Outer membrane protein beta-barrel CH53_3248 2ee243143533b5c259d74e9375dd589a 175 Gene3D G3DSA:2.40.160.20 25 175 8.3E-48 T 18-10-2018 CH53_3248 2ee243143533b5c259d74e9375dd589a 175 SUPERFAMILY SSF56925 28 175 6.54E-30 T 18-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CH53_715 b509f73793f571ed15d62a15cf9479b2 453 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 439 5.3E-156 T 18-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CH53_715 b509f73793f571ed15d62a15cf9479b2 453 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 439 5.3E-156 T 18-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CH53_715 b509f73793f571ed15d62a15cf9479b2 453 PIRSF PIRSF006351 1 447 2.0E-126 T 18-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CH53_715 b509f73793f571ed15d62a15cf9479b2 453 Pfam PF02378 Phosphotransferase system, EIIC 30 363 1.5E-44 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_1241 5e6960cdef402103f7d7bfdf3377855d 143 Pfam PF06877 Regulator of ribonuclease activity B 12 113 1.7E-34 T 18-10-2018 IPR009671 Regulator of ribonuclease activity B domain CH53_1241 5e6960cdef402103f7d7bfdf3377855d 143 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 30.873 T 18-10-2018 IPR016716 Regulator of ribonuclease activity B CH53_1241 5e6960cdef402103f7d7bfdf3377855d 143 SUPERFAMILY SSF89946 3 123 7.32E-42 T 18-10-2018 IPR036701 RraB-like superfamily CH53_1241 5e6960cdef402103f7d7bfdf3377855d 143 PIRSF PIRSF018193 1 143 1.4E-67 T 18-10-2018 IPR016716 Regulator of ribonuclease activity B CH53_1241 5e6960cdef402103f7d7bfdf3377855d 143 Gene3D G3DSA:3.30.70.970 1 125 3.3E-49 T 18-10-2018 IPR036701 RraB-like superfamily CH53_1233 10b29c9b14e559a07a70a80e3bbe781f 416 Pfam PF13356 Arm DNA-binding domain 3 87 2.5E-19 T 18-10-2018 IPR025166 Integrase, DNA-binding domain CH53_1233 10b29c9b14e559a07a70a80e3bbe781f 416 Pfam PF00589 Phage integrase family 205 383 1.5E-20 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CH53_1233 10b29c9b14e559a07a70a80e3bbe781f 416 Gene3D G3DSA:3.30.160.390 1 88 1.6E-33 T 18-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CH53_1233 10b29c9b14e559a07a70a80e3bbe781f 416 Gene3D G3DSA:1.10.443.10 208 391 9.3E-15 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CH53_1233 10b29c9b14e559a07a70a80e3bbe781f 416 SUPERFAMILY SSF56349 96 384 2.03E-49 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CH53_1233 10b29c9b14e559a07a70a80e3bbe781f 416 Gene3D G3DSA:1.10.150.130 89 202 9.2E-26 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 Pfam PF03764 Elongation factor G, domain IV 486 607 9.9E-49 T 18-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 Pfam PF03144 Elongation factor Tu domain 2 331 398 9.7E-17 T 18-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 18-10-2018 IPR031157 Tr-type G domain, conserved site CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 SUPERFAMILY SSF54980 612 697 2.27E-29 T 18-10-2018 IPR035647 EF-G domain III/V-like CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 Gene3D G3DSA:2.40.30.10 300 412 1.1E-43 T 18-10-2018 CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 Gene3D G3DSA:3.30.70.240 613 683 3.1E-89 T 18-10-2018 CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 SUPERFAMILY SSF52540 6 287 1.76E-105 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 Gene3D G3DSA:3.30.70.870 413 487 1.3E-32 T 18-10-2018 CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 Gene3D G3DSA:3.40.50.300 1 299 5.4E-116 T 18-10-2018 CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 Gene3D G3DSA:3.30.230.10 491 695 3.1E-89 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 Pfam PF14492 Elongation Factor G, domain II 411 485 9.8E-34 T 18-10-2018 CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 SMART SM00889 487 607 6.9E-76 T 18-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 SMART SM00838 609 696 2.3E-58 T 18-10-2018 IPR000640 Elongation factor EFG, domain V-like CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 701 0.0 T 18-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 SUPERFAMILY SSF54980 409 487 1.73E-25 T 18-10-2018 IPR035647 EF-G domain III/V-like CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 Pfam PF00679 Elongation factor G C-terminus 609 694 2.0E-31 T 18-10-2018 IPR000640 Elongation factor EFG, domain V-like CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.1E-31 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 SUPERFAMILY SSF50447 271 411 7.73E-35 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 SUPERFAMILY SSF54211 486 608 1.29E-42 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 113.372 T 18-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CH53_1493 42a66b258f778ff8ea3d7a4daf07b478 702 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 3.3E-67 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1661 93536f036b3ee07038d14228e7798ddc 397 Gene3D G3DSA:3.40.50.2300 102 283 7.4E-87 T 18-10-2018 CH53_1661 93536f036b3ee07038d14228e7798ddc 397 SUPERFAMILY SSF46689 289 337 9.54E-6 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1661 93536f036b3ee07038d14228e7798ddc 397 SUPERFAMILY SSF46689 343 392 2.8E-11 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1661 93536f036b3ee07038d14228e7798ddc 397 SMART SM00342 306 389 2.4E-27 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_1661 93536f036b3ee07038d14228e7798ddc 397 Gene3D G3DSA:3.40.50.2300 8 274 7.4E-87 T 18-10-2018 CH53_1661 93536f036b3ee07038d14228e7798ddc 397 Gene3D G3DSA:1.10.10.60 286 395 3.7E-28 T 18-10-2018 CH53_1661 93536f036b3ee07038d14228e7798ddc 397 Pfam PF12833 Helix-turn-helix domain 314 389 1.2E-16 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_1661 93536f036b3ee07038d14228e7798ddc 397 SUPERFAMILY SSF53822 10 304 1.69E-41 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_1661 93536f036b3ee07038d14228e7798ddc 397 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 343 385 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CH53_1661 93536f036b3ee07038d14228e7798ddc 397 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 358 373 5.7E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_1661 93536f036b3ee07038d14228e7798ddc 397 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 373 389 5.7E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_1661 93536f036b3ee07038d14228e7798ddc 397 Pfam PF13377 Periplasmic binding protein-like domain 113 282 5.5E-34 T 18-10-2018 CH53_153 fdab52d4823337e9469703cc0369349e 94 Gene3D G3DSA:4.10.520.10 40 94 1.3E-32 T 18-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CH53_153 fdab52d4823337e9469703cc0369349e 94 Gene3D G3DSA:4.10.520.10 2 39 1.8E-16 T 18-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CH53_153 fdab52d4823337e9469703cc0369349e 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_153 fdab52d4823337e9469703cc0369349e 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_153 fdab52d4823337e9469703cc0369349e 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_153 fdab52d4823337e9469703cc0369349e 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 18-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CH53_153 fdab52d4823337e9469703cc0369349e 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 4.7E-51 T 18-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CH53_153 fdab52d4823337e9469703cc0369349e 94 SMART SM00411 1 91 7.0E-41 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_153 fdab52d4823337e9469703cc0369349e 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.197 T 18-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CH53_153 fdab52d4823337e9469703cc0369349e 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 4.7E-29 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_153 fdab52d4823337e9469703cc0369349e 94 SUPERFAMILY SSF47729 1 91 2.94E-29 T 18-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CH53_2765 4f4fef1a10e7ac3e258bd630b8158c19 391 Gene3D G3DSA:2.40.50.100 61 95 4.0E-12 T 18-10-2018 CH53_2765 4f4fef1a10e7ac3e258bd630b8158c19 391 Pfam PF00529 HlyD membrane-fusion protein of T1SS 37 348 8.0E-15 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CH53_2765 4f4fef1a10e7ac3e258bd630b8158c19 391 Gene3D G3DSA:2.40.30.170 233 355 3.3E-36 T 18-10-2018 CH53_2765 4f4fef1a10e7ac3e258bd630b8158c19 391 SUPERFAMILY SSF111369 60 114 2.48E-5 T 18-10-2018 CH53_2765 4f4fef1a10e7ac3e258bd630b8158c19 391 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 21 346 4.4E-136 T 18-10-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 CH53_2765 4f4fef1a10e7ac3e258bd630b8158c19 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 290 4.2E-11 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH53_2765 4f4fef1a10e7ac3e258bd630b8158c19 391 Gene3D G3DSA:1.10.287.470 96 187 4.0E-12 T 18-10-2018 CH53_2765 4f4fef1a10e7ac3e258bd630b8158c19 391 SUPERFAMILY SSF111369 165 273 2.75E-9 T 18-10-2018 CH53_2047 2d8eac0cbd8b66904d94dc0d54c39d6f 357 Gene3D G3DSA:2.40.50.940 223 348 7.0E-26 T 18-10-2018 CH53_2047 2d8eac0cbd8b66904d94dc0d54c39d6f 357 SUPERFAMILY SSF52540 4 242 4.58E-86 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2047 2d8eac0cbd8b66904d94dc0d54c39d6f 357 SMART SM00382 29 212 4.5E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2047 2d8eac0cbd8b66904d94dc0d54c39d6f 357 Pfam PF08402 TOBE domain 278 347 2.9E-5 T 18-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 CH53_2047 2d8eac0cbd8b66904d94dc0d54c39d6f 357 Gene3D G3DSA:2.40.50.140 285 339 7.0E-26 T 18-10-2018 CH53_2047 2d8eac0cbd8b66904d94dc0d54c39d6f 357 SUPERFAMILY SSF50331 237 355 1.12E-26 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CH53_2047 2d8eac0cbd8b66904d94dc0d54c39d6f 357 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2047 2d8eac0cbd8b66904d94dc0d54c39d6f 357 Pfam PF00005 ABC transporter 21 162 3.5E-31 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2047 2d8eac0cbd8b66904d94dc0d54c39d6f 357 Gene3D G3DSA:3.40.50.300 3 222 3.6E-64 T 18-10-2018 CH53_2427 ec669778c5ff35ba62486918022853dc 409 Pfam PF01546 Peptidase family M20/M25/M40 143 400 8.3E-11 T 18-10-2018 IPR002933 Peptidase M20 GO:0016787 CH53_2427 ec669778c5ff35ba62486918022853dc 409 Gene3D G3DSA:3.30.70.360 212 322 8.6E-134 T 18-10-2018 CH53_2427 ec669778c5ff35ba62486918022853dc 409 SUPERFAMILY SSF55031 212 322 9.94E-34 T 18-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CH53_2427 ec669778c5ff35ba62486918022853dc 409 SUPERFAMILY SSF53187 7 407 4.19E-71 T 18-10-2018 CH53_2427 ec669778c5ff35ba62486918022853dc 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 142 179 - T 18-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CH53_2427 ec669778c5ff35ba62486918022853dc 409 Gene3D G3DSA:3.40.630.10 9 401 8.6E-134 T 18-10-2018 CH53_2427 ec669778c5ff35ba62486918022853dc 409 Pfam PF07687 Peptidase dimerisation domain 210 309 8.9E-10 T 18-10-2018 IPR011650 Peptidase M20, dimerisation domain CH53_2427 ec669778c5ff35ba62486918022853dc 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 7 399 7.9E-100 T 18-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CH53_2427 ec669778c5ff35ba62486918022853dc 409 PIRSF PIRSF037215 4 409 2.0E-152 T 18-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CH53_1274 84689167338fba8d6bc1d6e6835bb3ab 294 Gene3D G3DSA:1.25.40.10 20 294 1.3E-116 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1274 84689167338fba8d6bc1d6e6835bb3ab 294 SUPERFAMILY SSF48452 27 283 3.8E-74 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1274 84689167338fba8d6bc1d6e6835bb3ab 294 SMART SM00028 96 129 2.0E-4 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_1274 84689167338fba8d6bc1d6e6835bb3ab 294 SMART SM00028 62 95 0.0033 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_1274 84689167338fba8d6bc1d6e6835bb3ab 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.033 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_1274 84689167338fba8d6bc1d6e6835bb3ab 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.3E-5 T 18-10-2018 IPR013105 Tetratricopeptide repeat 2 CH53_1274 84689167338fba8d6bc1d6e6835bb3ab 294 PIRSF PIRSF004654 1 292 1.9E-116 T 18-10-2018 IPR023605 Lipoprotein NlpI CH53_3404 3830cd587f6e83acfb853abbcae4a13a 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.7E-7 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_3404 3830cd587f6e83acfb853abbcae4a13a 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.7E-7 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_3404 3830cd587f6e83acfb853abbcae4a13a 253 SMART SM00420 6 58 6.1E-15 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_3404 3830cd587f6e83acfb853abbcae4a13a 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 4.1E-15 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_3404 3830cd587f6e83acfb853abbcae4a13a 253 Pfam PF00455 DeoR C terminal sensor domain 74 232 8.0E-41 T 18-10-2018 IPR014036 DeoR C-terminal sensor domain CH53_3404 3830cd587f6e83acfb853abbcae4a13a 253 SUPERFAMILY SSF100950 74 233 1.26E-26 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_3404 3830cd587f6e83acfb853abbcae4a13a 253 SUPERFAMILY SSF46785 5 62 1.82E-11 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3404 3830cd587f6e83acfb853abbcae4a13a 253 SMART SM01134 72 233 1.3E-56 T 18-10-2018 CH53_3404 3830cd587f6e83acfb853abbcae4a13a 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 18-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CH53_3404 3830cd587f6e83acfb853abbcae4a13a 253 Gene3D G3DSA:1.10.10.10 1 56 6.2E-6 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2879 a6b37aac64264eaa068c2c1411880ae8 129 Gene3D G3DSA:1.10.10.10 29 129 1.8E-35 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2879 a6b37aac64264eaa068c2c1411880ae8 129 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 32 110 8.5E-25 T 18-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CH53_2879 a6b37aac64264eaa068c2c1411880ae8 129 SUPERFAMILY SSF46767 30 112 2.22E-25 T 18-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 CH53_2879 a6b37aac64264eaa068c2c1411880ae8 129 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 31 108 9.5E-15 T 18-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CH53_1495 3fda9daf32cf0360a89b79e758bae6a6 124 Gene3D G3DSA:2.40.50.140 1 124 1.2E-63 T 18-10-2018 CH53_1495 3fda9daf32cf0360a89b79e758bae6a6 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.507 T 18-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1495 3fda9daf32cf0360a89b79e758bae6a6 124 SUPERFAMILY SSF50249 3 123 2.23E-52 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_1495 3fda9daf32cf0360a89b79e758bae6a6 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 7.5E-43 T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1495 3fda9daf32cf0360a89b79e758bae6a6 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1495 3fda9daf32cf0360a89b79e758bae6a6 124 PIRSF PIRSF002133 1 124 1.9E-54 T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1495 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.1E-60 T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1495 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.1E-60 T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1495 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.1E-60 T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1495 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.1E-60 T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1495 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.1E-60 T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1495 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.1E-60 T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1495 3fda9daf32cf0360a89b79e758bae6a6 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 9.8E-71 T 18-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_4379 9ecbfec581f522b7ad14ffff72f8f387 467 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 51 156 1.5E-19 T 18-10-2018 IPR000014 PAS domain CH53_4379 9ecbfec581f522b7ad14ffff72f8f387 467 SUPERFAMILY SSF55073 304 462 1.41E-43 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_4379 9ecbfec581f522b7ad14ffff72f8f387 467 Gene3D G3DSA:3.30.450.20 35 169 2.0E-27 T 18-10-2018 CH53_4379 9ecbfec581f522b7ad14ffff72f8f387 467 Gene3D G3DSA:3.30.450.20 170 285 1.0E-14 T 18-10-2018 CH53_4379 9ecbfec581f522b7ad14ffff72f8f387 467 SMART SM00086 247 288 270.0 T 18-10-2018 IPR001610 PAC motif CH53_4379 9ecbfec581f522b7ad14ffff72f8f387 467 SMART SM00086 112 154 2.8E-6 T 18-10-2018 IPR001610 PAC motif CH53_4379 9ecbfec581f522b7ad14ffff72f8f387 467 Pfam PF00990 Diguanylate cyclase, GGDEF domain 300 460 1.2E-46 T 18-10-2018 IPR000160 GGDEF domain CH53_4379 9ecbfec581f522b7ad14ffff72f8f387 467 Gene3D G3DSA:3.30.70.270 286 464 4.6E-54 T 18-10-2018 CH53_4379 9ecbfec581f522b7ad14ffff72f8f387 467 SUPERFAMILY SSF55785 53 163 1.54E-21 T 18-10-2018 IPR035965 PAS domain superfamily CH53_4379 9ecbfec581f522b7ad14ffff72f8f387 467 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 296 463 1.6E-49 T 18-10-2018 IPR000160 GGDEF domain CH53_4379 9ecbfec581f522b7ad14ffff72f8f387 467 Pfam PF13426 PAS domain 52 153 1.1E-12 T 18-10-2018 IPR000014 PAS domain CH53_4379 9ecbfec581f522b7ad14ffff72f8f387 467 SMART SM00267 288 464 6.5E-60 T 18-10-2018 IPR000160 GGDEF domain CH53_4379 9ecbfec581f522b7ad14ffff72f8f387 467 SMART SM00091 40 107 1.6E-6 T 18-10-2018 IPR000014 PAS domain CH53_4379 9ecbfec581f522b7ad14ffff72f8f387 467 SMART SM00091 166 241 6.9 T 18-10-2018 IPR000014 PAS domain CH53_4379 9ecbfec581f522b7ad14ffff72f8f387 467 Pfam PF08447 PAS fold 194 278 9.0E-7 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 CH53_4379 9ecbfec581f522b7ad14ffff72f8f387 467 SUPERFAMILY SSF55785 151 286 1.02E-12 T 18-10-2018 IPR035965 PAS domain superfamily CH53_2701 4c1303ecc999efedebaf3f31737ad038 390 Gene3D G3DSA:2.40.240.50 125 264 1.1E-154 T 18-10-2018 CH53_2701 4c1303ecc999efedebaf3f31737ad038 390 PIRSF PIRSF019422 1 367 6.6E-88 T 18-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A CH53_2701 4c1303ecc999efedebaf3f31737ad038 390 Gene3D G3DSA:2.40.40.10 54 355 1.1E-154 T 18-10-2018 IPR036908 RlpA-like domain superfamily CH53_2701 4c1303ecc999efedebaf3f31737ad038 390 SUPERFAMILY SSF50685 25 355 4.53E-110 T 18-10-2018 IPR036908 RlpA-like domain superfamily CH53_2701 4c1303ecc999efedebaf3f31737ad038 390 SMART SM00925 125 259 3.0E-73 T 18-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CH53_2701 4c1303ecc999efedebaf3f31737ad038 390 Pfam PF06725 3D domain 279 356 4.4E-25 T 18-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 CH53_2701 4c1303ecc999efedebaf3f31737ad038 390 Pfam PF03562 MltA specific insert domain 102 259 9.8E-42 T 18-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CH53_1979 1e19fc53c9fbf317a3eea64570ef7bcd 376 Gene3D G3DSA:3.90.1150.10 250 376 8.7E-25 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_1979 1e19fc53c9fbf317a3eea64570ef7bcd 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 1.8E-212 T 18-10-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 CH53_1979 1e19fc53c9fbf317a3eea64570ef7bcd 376 Gene3D G3DSA:3.40.640.10 1 249 2.4E-83 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_1979 1e19fc53c9fbf317a3eea64570ef7bcd 376 PIRSF PIRSF000390 1 376 5.7E-118 T 18-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CH53_1979 1e19fc53c9fbf317a3eea64570ef7bcd 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 371 1.0E-84 T 18-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CH53_1979 1e19fc53c9fbf317a3eea64570ef7bcd 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 79.741 T 18-10-2018 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 CH53_1979 1e19fc53c9fbf317a3eea64570ef7bcd 376 SUPERFAMILY SSF53383 2 375 2.31E-101 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_2907 ffd54c55d81cc8baa0a64ddfc4870a34 318 SUPERFAMILY SSF53448 7 219 2.17E-40 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_2907 ffd54c55d81cc8baa0a64ddfc4870a34 318 Pfam PF00535 Glycosyl transferase family 2 8 105 2.1E-24 T 18-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CH53_2907 ffd54c55d81cc8baa0a64ddfc4870a34 318 Gene3D G3DSA:3.90.550.10 5 198 5.9E-38 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_126 fa599000e4c7e70331ed3514b4da6f77 369 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 322 330 - T 18-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CH53_126 fa599000e4c7e70331ed3514b4da6f77 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 297 361 4.4E-12 T 18-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CH53_126 fa599000e4c7e70331ed3514b4da6f77 369 Gene3D G3DSA:3.10.20.30 278 368 6.0E-17 T 18-10-2018 IPR012675 Beta-grasp domain superfamily CH53_126 fa599000e4c7e70331ed3514b4da6f77 369 Pfam PF03476 MOSC N-terminal beta barrel domain 2 116 4.4E-29 T 18-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 CH53_126 fa599000e4c7e70331ed3514b4da6f77 369 SUPERFAMILY SSF141673 4 132 9.29E-29 T 18-10-2018 CH53_126 fa599000e4c7e70331ed3514b4da6f77 369 SUPERFAMILY SSF54292 286 366 5.24E-20 T 18-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CH53_126 fa599000e4c7e70331ed3514b4da6f77 369 SUPERFAMILY SSF50800 4 263 1.36E-15 T 18-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily CH53_126 fa599000e4c7e70331ed3514b4da6f77 369 Pfam PF03473 MOSC domain 139 261 7.7E-28 T 18-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CH53_92 fd5a11292c1a00945ee3664d411f40b0 173 SUPERFAMILY SSF49401 29 173 3.28E-22 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_92 fd5a11292c1a00945ee3664d411f40b0 173 Gene3D G3DSA:2.60.40.1090 22 173 3.0E-24 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_92 fd5a11292c1a00945ee3664d411f40b0 173 Pfam PF00419 Fimbrial protein 23 173 4.3E-9 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_2156 0b33134267ab2d076f33a3e51f02df42 327 Gene3D G3DSA:3.40.50.720 124 269 4.5E-117 T 18-10-2018 CH53_2156 0b33134267ab2d076f33a3e51f02df42 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 9.3E-10 T 18-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CH53_2156 0b33134267ab2d076f33a3e51f02df42 327 SUPERFAMILY SSF51735 112 275 3.51E-47 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2156 0b33134267ab2d076f33a3e51f02df42 327 SMART SM00829 11 325 1.1E-26 T 18-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CH53_2156 0b33134267ab2d076f33a3e51f02df42 327 Gene3D G3DSA:3.90.180.10 11 321 4.5E-117 T 18-10-2018 CH53_2156 0b33134267ab2d076f33a3e51f02df42 327 SUPERFAMILY SSF50129 2 145 2.04E-33 T 18-10-2018 IPR011032 GroES-like superfamily CH53_2156 0b33134267ab2d076f33a3e51f02df42 327 Pfam PF00107 Zinc-binding dehydrogenase 152 257 5.8E-27 T 18-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CH53_2082 11c58f5883a13fbb3251c74fedf33e19 316 SUPERFAMILY SSF52540 10 315 2.72E-76 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2082 11c58f5883a13fbb3251c74fedf33e19 316 Gene3D G3DSA:3.40.50.300 9 316 1.4E-94 T 18-10-2018 CH53_2082 11c58f5883a13fbb3251c74fedf33e19 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 1.0E-168 T 18-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CH53_2082 11c58f5883a13fbb3251c74fedf33e19 316 PIRSF PIRSF000545 1 316 1.5E-147 T 18-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CH53_2082 11c58f5883a13fbb3251c74fedf33e19 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 244 2.1E-15 T 18-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 CH53_2082 11c58f5883a13fbb3251c74fedf33e19 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 188.485 T 18-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CH53_1664 ee4fc3e0779bc92c7515f018b954e587 331 Gene3D G3DSA:3.40.50.2300 29 305 2.3E-123 T 18-10-2018 CH53_1664 ee4fc3e0779bc92c7515f018b954e587 331 Gene3D G3DSA:3.40.50.2300 129 317 2.3E-123 T 18-10-2018 CH53_1664 ee4fc3e0779bc92c7515f018b954e587 331 Pfam PF13407 Periplasmic binding protein domain 38 286 8.8E-61 T 18-10-2018 IPR025997 Periplasmic binding protein CH53_1664 ee4fc3e0779bc92c7515f018b954e587 331 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 329 1.2E-163 T 18-10-2018 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 CH53_1664 ee4fc3e0779bc92c7515f018b954e587 331 SUPERFAMILY SSF53822 24 317 3.62E-71 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_129 453c7093b9ea9c904e2fcbde61d97263 871 SUPERFAMILY SSF63737 1 193 4.18E-49 T 18-10-2018 CH53_129 453c7093b9ea9c904e2fcbde61d97263 871 SUPERFAMILY SSF55486 204 450 1.1E-73 T 18-10-2018 CH53_129 453c7093b9ea9c904e2fcbde61d97263 871 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 18-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 CH53_129 453c7093b9ea9c904e2fcbde61d97263 871 Gene3D G3DSA:1.25.50.10 546 870 3.6E-125 T 18-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily CH53_129 453c7093b9ea9c904e2fcbde61d97263 871 Pfam PF01433 Peptidase family M1 domain 208 439 9.6E-59 T 18-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CH53_129 453c7093b9ea9c904e2fcbde61d97263 871 Gene3D G3DSA:1.10.390.10 280 443 5.3E-65 T 18-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily CH53_129 453c7093b9ea9c904e2fcbde61d97263 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 7.2E-9 T 18-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CH53_129 453c7093b9ea9c904e2fcbde61d97263 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 7.2E-9 T 18-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CH53_129 453c7093b9ea9c904e2fcbde61d97263 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 7.2E-9 T 18-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CH53_129 453c7093b9ea9c904e2fcbde61d97263 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 7.2E-9 T 18-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CH53_129 453c7093b9ea9c904e2fcbde61d97263 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 7.2E-9 T 18-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CH53_129 453c7093b9ea9c904e2fcbde61d97263 871 Gene3D G3DSA:1.10.1740.60 195 279 2.0E-40 T 18-10-2018 CH53_129 453c7093b9ea9c904e2fcbde61d97263 871 Gene3D G3DSA:2.60.40.1730 15 194 1.2E-71 T 18-10-2018 CH53_129 453c7093b9ea9c904e2fcbde61d97263 871 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 548 870 3.2E-121 T 18-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CH53_129 453c7093b9ea9c904e2fcbde61d97263 871 Gene3D G3DSA:2.60.40.1840 444 545 1.3E-36 T 18-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily CH53_129 453c7093b9ea9c904e2fcbde61d97263 871 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 444 544 5.9E-34 T 18-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CH53_2070 2c32e0f2b18f997553bfde22096f56c4 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 18-10-2018 IPR020610 Thiolase, active site GO:0016747 CH53_2070 2c32e0f2b18f997553bfde22096f56c4 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 5.8E-225 T 18-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CH53_2070 2c32e0f2b18f997553bfde22096f56c4 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 9.7E-82 T 18-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CH53_2070 2c32e0f2b18f997553bfde22096f56c4 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 18-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CH53_2070 2c32e0f2b18f997553bfde22096f56c4 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 18-10-2018 IPR020613 Thiolase, conserved site GO:0016747 CH53_2070 2c32e0f2b18f997553bfde22096f56c4 387 Gene3D G3DSA:3.40.47.10 4 267 3.6E-152 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_2070 2c32e0f2b18f997553bfde22096f56c4 387 SUPERFAMILY SSF53901 1 258 2.88E-78 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_2070 2c32e0f2b18f997553bfde22096f56c4 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.32 T 18-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CH53_2070 2c32e0f2b18f997553bfde22096f56c4 387 Pfam PF02803 Thiolase, C-terminal domain 261 386 1.2E-49 T 18-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CH53_2070 2c32e0f2b18f997553bfde22096f56c4 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 2.3E-141 T 18-10-2018 IPR002155 Thiolase GO:0016747 CH53_2070 2c32e0f2b18f997553bfde22096f56c4 387 Gene3D G3DSA:3.40.47.10 134 381 3.6E-152 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_2070 2c32e0f2b18f997553bfde22096f56c4 387 PIRSF PIRSF000429 1 387 7.1E-131 T 18-10-2018 IPR002155 Thiolase GO:0016747 CH53_2070 2c32e0f2b18f997553bfde22096f56c4 387 SUPERFAMILY SSF53901 262 386 7.36E-45 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_1858 183ada4498d340bd390c602cce3ab8ad 78 Pfam PF00830 Ribosomal L28 family 3 62 1.8E-25 T 18-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1858 183ada4498d340bd390c602cce3ab8ad 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.265 T 18-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1858 183ada4498d340bd390c602cce3ab8ad 78 Gene3D G3DSA:2.30.170.40 2 78 6.4E-33 T 18-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1858 183ada4498d340bd390c602cce3ab8ad 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 9.0E-29 T 18-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1858 183ada4498d340bd390c602cce3ab8ad 78 SUPERFAMILY SSF143800 1 77 6.47E-30 T 18-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2235 1b21da3ad7a11be48075a530aaeb593f 128 Gene3D G3DSA:3.30.1330.40 1 128 3.0E-47 T 18-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CH53_2235 1b21da3ad7a11be48075a530aaeb593f 128 Pfam PF01042 Endoribonuclease L-PSP 8 126 3.8E-43 T 18-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CH53_2235 1b21da3ad7a11be48075a530aaeb593f 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 18-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 CH53_2235 1b21da3ad7a11be48075a530aaeb593f 128 SUPERFAMILY SSF55298 4 127 8.64E-43 T 18-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CH53_2235 1b21da3ad7a11be48075a530aaeb593f 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 1.3E-52 T 18-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 CH53_4391 664eae6227cc9e43adad53b8f9d2a360 422 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 351 1.8E-15 T 18-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CH53_4391 664eae6227cc9e43adad53b8f9d2a360 422 Pfam PF13438 Domain of unknown function (DUF4113) 371 417 2.0E-17 T 18-10-2018 IPR025188 Domain of unknown function DUF4113 CH53_4391 664eae6227cc9e43adad53b8f9d2a360 422 SUPERFAMILY SSF56672 1 236 7.21E-66 T 18-10-2018 CH53_4391 664eae6227cc9e43adad53b8f9d2a360 422 Gene3D G3DSA:1.10.150.20 172 228 9.1E-9 T 18-10-2018 CH53_4391 664eae6227cc9e43adad53b8f9d2a360 422 SUPERFAMILY SSF100879 248 337 2.54E-5 T 18-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CH53_4391 664eae6227cc9e43adad53b8f9d2a360 422 Gene3D G3DSA:2.30.40.20 10 73 1.9E-41 T 18-10-2018 CH53_4391 664eae6227cc9e43adad53b8f9d2a360 422 Gene3D G3DSA:3.30.1490.100 245 354 5.5E-6 T 18-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CH53_4391 664eae6227cc9e43adad53b8f9d2a360 422 Gene3D G3DSA:3.30.70.270 4 154 1.9E-41 T 18-10-2018 CH53_4391 664eae6227cc9e43adad53b8f9d2a360 422 Pfam PF00817 impB/mucB/samB family 5 150 2.1E-33 T 18-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 Gene3D G3DSA:3.30.70.1450 140 232 1.5E-22 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 SUPERFAMILY SSF51735 232 376 2.6E-33 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 SUPERFAMILY SSF116726 391 440 7.85E-8 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 SUPERFAMILY SSF51735 1 152 1.35E-36 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 Gene3D G3DSA:3.40.50.720 2 139 7.4E-50 T 18-10-2018 CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 SUPERFAMILY SSF116726 148 226 2.75E-10 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 Pfam PF02254 TrkA-N domain 3 124 9.1E-30 T 18-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 Pfam PF02254 TrkA-N domain 235 350 3.6E-25 T 18-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 Gene3D G3DSA:3.40.50.720 233 366 1.5E-36 T 18-10-2018 CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 Gene3D G3DSA:3.30.70.1450 367 458 2.4E-29 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 Pfam PF02080 TrkA-C domain 391 451 1.6E-10 T 18-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 Pfam PF02080 TrkA-C domain 156 225 6.1E-12 T 18-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.2E-35 T 18-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.2E-35 T 18-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.2E-35 T 18-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.2E-35 T 18-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CH53_1457 6d59845b0ec2c1b2d1905795620273cb 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.2E-35 T 18-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CH53_4421 dac63d288671d0c2835abb2ee1ee721e 192 Gene3D G3DSA:3.40.50.10610 56 192 5.9E-53 T 18-10-2018 CH53_4421 dac63d288671d0c2835abb2ee1ee721e 192 Pfam PF13036 Peptidoglycan-synthase activator LpoB 52 189 6.4E-35 T 18-10-2018 IPR014094 Penicillin-binding protein activator LpoB CH53_4421 dac63d288671d0c2835abb2ee1ee721e 192 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 2 191 4.0E-56 T 18-10-2018 IPR014094 Penicillin-binding protein activator LpoB CH53_4421 dac63d288671d0c2835abb2ee1ee721e 192 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 1 191 35.496 T 18-10-2018 IPR014094 Penicillin-binding protein activator LpoB CH53_2866 f97effb90eb2f91e40b8cea9e2aa66af 147 Pfam PF12836 Helix-hairpin-helix motif 83 145 1.8E-21 T 18-10-2018 CH53_2866 f97effb90eb2f91e40b8cea9e2aa66af 147 Gene3D G3DSA:1.10.150.280 78 146 1.4E-19 T 18-10-2018 CH53_2866 f97effb90eb2f91e40b8cea9e2aa66af 147 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 83 145 3.8E-25 T 18-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CH53_2866 f97effb90eb2f91e40b8cea9e2aa66af 147 SUPERFAMILY SSF47781 63 141 3.78E-25 T 18-10-2018 IPR010994 RuvA domain 2-like CH53_1456 91302c22cd5159a5070395d80b8055c6 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 3.6E-31 T 18-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CH53_1456 91302c22cd5159a5070395d80b8055c6 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 3.6E-31 T 18-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CH53_1456 91302c22cd5159a5070395d80b8055c6 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 3.6E-31 T 18-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CH53_1456 91302c22cd5159a5070395d80b8055c6 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 3.6E-31 T 18-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CH53_1456 91302c22cd5159a5070395d80b8055c6 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 3.6E-31 T 18-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CH53_1456 91302c22cd5159a5070395d80b8055c6 429 SUPERFAMILY SSF53335 141 428 8.74E-80 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_1456 91302c22cd5159a5070395d80b8055c6 429 SUPERFAMILY SSF48013 6 149 6.54E-36 T 18-10-2018 IPR035926 NusB-like superfamily CH53_1456 91302c22cd5159a5070395d80b8055c6 429 Gene3D G3DSA:1.10.940.10 1 145 6.1E-48 T 18-10-2018 IPR035926 NusB-like superfamily CH53_1456 91302c22cd5159a5070395d80b8055c6 429 Gene3D G3DSA:1.10.287.730 146 172 5.9E-16 T 18-10-2018 CH53_1456 91302c22cd5159a5070395d80b8055c6 429 Gene3D G3DSA:3.40.50.150 231 429 1.2E-72 T 18-10-2018 CH53_1456 91302c22cd5159a5070395d80b8055c6 429 Pfam PF01029 NusB family 6 127 3.6E-24 T 18-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CH53_1456 91302c22cd5159a5070395d80b8055c6 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 18-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 CH53_1456 91302c22cd5159a5070395d80b8055c6 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 426 1.3E-75 T 18-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 CH53_1456 91302c22cd5159a5070395d80b8055c6 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 429 6.0E-174 T 18-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 CH53_1456 91302c22cd5159a5070395d80b8055c6 429 Gene3D G3DSA:3.30.70.1170 173 230 3.3E-25 T 18-10-2018 CH53_1456 91302c22cd5159a5070395d80b8055c6 429 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 70.187 T 18-10-2018 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 CH53_1349 80cc1b08a57b518261d340872c8cae39 350 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 39 340 37.206 T 18-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CH53_1349 80cc1b08a57b518261d340872c8cae39 350 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 72 334 2.6E-92 T 18-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CH53_1349 80cc1b08a57b518261d340872c8cae39 350 Gene3D G3DSA:2.40.50.140 34 101 1.9E-26 T 18-10-2018 CH53_1349 80cc1b08a57b518261d340872c8cae39 350 Gene3D G3DSA:1.10.40.50 276 349 5.2E-28 T 18-10-2018 CH53_1349 80cc1b08a57b518261d340872c8cae39 350 SUPERFAMILY SSF52540 113 340 3.56E-57 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1349 80cc1b08a57b518261d340872c8cae39 350 Pfam PF03193 RsgA GTPase 99 276 1.3E-54 T 18-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 CH53_1349 80cc1b08a57b518261d340872c8cae39 350 Gene3D G3DSA:3.40.50.300 102 275 1.7E-47 T 18-10-2018 CH53_2200 848518961cfbdb5db3798bf3ff69c37b 347 SUPERFAMILY SSF53067 153 340 4.08E-50 T 18-10-2018 CH53_2200 848518961cfbdb5db3798bf3ff69c37b 347 Pfam PF06723 MreB/Mbl protein 11 338 9.8E-150 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CH53_2200 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CH53_2200 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CH53_2200 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CH53_2200 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CH53_2200 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CH53_2200 848518961cfbdb5db3798bf3ff69c37b 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 18-10-2018 CH53_2200 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 158 321 6.2E-130 T 18-10-2018 CH53_2200 848518961cfbdb5db3798bf3ff69c37b 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.1E-170 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CH53_2200 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 14 331 6.2E-130 T 18-10-2018 CH53_2200 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.90.640.10 190 263 6.2E-130 T 18-10-2018 CH53_1673 74430b3b306d70ce844c17886730c782 308 Gene3D G3DSA:3.40.50.880 1 213 3.2E-47 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_1673 74430b3b306d70ce844c17886730c782 308 Gene3D G3DSA:1.10.10.60 214 303 4.4E-15 T 18-10-2018 CH53_1673 74430b3b306d70ce844c17886730c782 308 Pfam PF01965 DJ-1/PfpI family 4 173 9.5E-12 T 18-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CH53_1673 74430b3b306d70ce844c17886730c782 308 SUPERFAMILY SSF52317 3 195 2.69E-33 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_1673 74430b3b306d70ce844c17886730c782 308 Pfam PF12833 Helix-turn-helix domain 236 299 3.0E-11 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_1673 74430b3b306d70ce844c17886730c782 308 SMART SM00342 230 305 3.5E-6 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_1673 74430b3b306d70ce844c17886730c782 308 SUPERFAMILY SSF46689 213 263 2.45E-7 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_2412 1004f0206cbbba4fa96fb44abc304139 352 SUPERFAMILY SSF52540 138 348 1.21E-34 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2412 1004f0206cbbba4fa96fb44abc304139 352 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 140 351 3.4E-92 T 18-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 CH53_2412 1004f0206cbbba4fa96fb44abc304139 352 PIRSF PIRSF005624 132 352 4.1E-98 T 18-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 CH53_2412 1004f0206cbbba4fa96fb44abc304139 352 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 168 329 2.8E-36 T 18-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CH53_2412 1004f0206cbbba4fa96fb44abc304139 352 Gene3D G3DSA:3.40.50.300 148 352 2.8E-63 T 18-10-2018 CH53_1613 9f8429115a7f25ef48d8867303846743 450 SUPERFAMILY SSF51905 1 365 1.55E-60 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1613 9f8429115a7f25ef48d8867303846743 450 PIRSF PIRSF000350 1 447 3.9E-86 T 18-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CH53_1613 9f8429115a7f25ef48d8867303846743 450 SUPERFAMILY SSF55424 336 450 6.87E-35 T 18-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CH53_1613 9f8429115a7f25ef48d8867303846743 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 318 8.4E-70 T 18-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CH53_1613 9f8429115a7f25ef48d8867303846743 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 2.8E-219 T 18-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 CH53_1613 9f8429115a7f25ef48d8867303846743 450 Gene3D G3DSA:3.50.50.60 144 261 3.1E-125 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1613 9f8429115a7f25ef48d8867303846743 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 6.6E-34 T 18-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CH53_1613 9f8429115a7f25ef48d8867303846743 450 Gene3D G3DSA:3.50.50.60 5 318 3.1E-125 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1613 9f8429115a7f25ef48d8867303846743 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 18-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CH53_1613 9f8429115a7f25ef48d8867303846743 450 Gene3D G3DSA:3.30.390.30 338 450 7.4E-48 T 18-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CH53_1613 9f8429115a7f25ef48d8867303846743 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.5E-29 T 18-10-2018 CH53_1613 9f8429115a7f25ef48d8867303846743 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.5E-29 T 18-10-2018 CH53_1613 9f8429115a7f25ef48d8867303846743 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.5E-29 T 18-10-2018 CH53_1613 9f8429115a7f25ef48d8867303846743 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.5E-29 T 18-10-2018 CH53_1613 9f8429115a7f25ef48d8867303846743 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.5E-29 T 18-10-2018 CH53_1613 9f8429115a7f25ef48d8867303846743 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 6.9E-67 T 18-10-2018 CH53_1613 9f8429115a7f25ef48d8867303846743 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 6.9E-67 T 18-10-2018 CH53_1613 9f8429115a7f25ef48d8867303846743 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 6.9E-67 T 18-10-2018 CH53_1613 9f8429115a7f25ef48d8867303846743 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 6.9E-67 T 18-10-2018 CH53_1613 9f8429115a7f25ef48d8867303846743 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 6.9E-67 T 18-10-2018 CH53_1613 9f8429115a7f25ef48d8867303846743 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 6.9E-67 T 18-10-2018 CH53_1613 9f8429115a7f25ef48d8867303846743 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 6.9E-67 T 18-10-2018 CH53_1613 9f8429115a7f25ef48d8867303846743 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 6.9E-67 T 18-10-2018 CH53_1613 9f8429115a7f25ef48d8867303846743 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 6.9E-67 T 18-10-2018 CH53_489 8ef6efb69708ed7c01e155713ff04583 629 Pfam PF02378 Phosphotransferase system, EIIC 109 392 1.3E-29 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_489 8ef6efb69708ed7c01e155713ff04583 629 SUPERFAMILY SSF55604 6 81 3.79E-21 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_489 8ef6efb69708ed7c01e155713ff04583 629 Gene3D G3DSA:2.70.70.10 473 629 1.5E-54 T 18-10-2018 IPR011055 Duplicated hybrid motif CH53_489 8ef6efb69708ed7c01e155713ff04583 629 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 545 557 - T 18-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CH53_489 8ef6efb69708ed7c01e155713ff04583 629 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_489 8ef6efb69708ed7c01e155713ff04583 629 Gene3D G3DSA:3.30.1360.60 1 77 1.4E-26 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_489 8ef6efb69708ed7c01e155713ff04583 629 SUPERFAMILY SSF51261 481 626 2.44E-52 T 18-10-2018 IPR011055 Duplicated hybrid motif CH53_489 8ef6efb69708ed7c01e155713ff04583 629 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 482 606 5.5E-49 T 18-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CH53_489 8ef6efb69708ed7c01e155713ff04583 629 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 627 2.3E-222 T 18-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 CH53_489 8ef6efb69708ed7c01e155713ff04583 629 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 483 603 2.9E-45 T 18-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CH53_489 8ef6efb69708ed7c01e155713ff04583 629 Pfam PF00367 phosphotransferase system, EIIB 9 41 6.8E-14 T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_2249 6985a86698060025cd3e6bcc636022dd 187 PIRSF PIRSF006118 12 187 8.6E-72 T 18-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CH53_2249 6985a86698060025cd3e6bcc636022dd 187 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 25 177 7.9E-69 T 18-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CH53_2249 6985a86698060025cd3e6bcc636022dd 187 Pfam PF08282 haloacid dehalogenase-like hydrolase 95 161 1.5E-9 T 18-10-2018 CH53_2249 6985a86698060025cd3e6bcc636022dd 187 Gene3D G3DSA:3.40.50.1000 2 187 2.7E-58 T 18-10-2018 IPR023214 HAD superfamily CH53_2249 6985a86698060025cd3e6bcc636022dd 187 SUPERFAMILY SSF56784 21 179 1.76E-41 T 18-10-2018 IPR036412 HAD-like superfamily CH53_1570 49c69c8c4ea9667f27efd62a9b52592e 903 SUPERFAMILY SSF48452 442 806 2.83E-157 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1570 49c69c8c4ea9667f27efd62a9b52592e 903 Gene3D G3DSA:1.25.40.10 440 811 3.3E-95 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1570 49c69c8c4ea9667f27efd62a9b52592e 903 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1570 49c69c8c4ea9667f27efd62a9b52592e 903 SUPERFAMILY SSF52540 8 226 2.71E-6 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1570 49c69c8c4ea9667f27efd62a9b52592e 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.2E-10 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1570 49c69c8c4ea9667f27efd62a9b52592e 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.2E-10 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1570 49c69c8c4ea9667f27efd62a9b52592e 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.2E-10 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1570 49c69c8c4ea9667f27efd62a9b52592e 903 SUPERFAMILY SSF46894 829 895 3.74E-17 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_1570 49c69c8c4ea9667f27efd62a9b52592e 903 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 891 1.2E-19 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1570 49c69c8c4ea9667f27efd62a9b52592e 903 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 36.919 T 18-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT CH53_1570 49c69c8c4ea9667f27efd62a9b52592e 903 SMART SM00421 836 893 1.5E-20 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1570 49c69c8c4ea9667f27efd62a9b52592e 903 Gene3D G3DSA:1.10.10.10 828 900 1.3E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2711 b3adb4755f8614e366771a648c3c009a 281 Pfam PF14489 QueF-like protein 195 269 2.1E-27 T 18-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CH53_2711 b3adb4755f8614e366771a648c3c009a 281 TIGRFAM TIGR03138 QueF: queuine synthase 10 281 7.6E-126 T 18-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CH53_2711 b3adb4755f8614e366771a648c3c009a 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 164.271 T 18-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CH53_2711 b3adb4755f8614e366771a648c3c009a 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 5.5E-48 T 18-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CH53_2711 b3adb4755f8614e366771a648c3c009a 281 PIRSF PIRSF004750 6 281 5.0E-125 T 18-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CH53_2711 b3adb4755f8614e366771a648c3c009a 281 Gene3D G3DSA:3.30.1130.10 21 139 8.7E-44 T 18-10-2018 CH53_2711 b3adb4755f8614e366771a648c3c009a 281 Gene3D G3DSA:3.30.1130.10 145 281 6.7E-60 T 18-10-2018 CH53_2711 b3adb4755f8614e366771a648c3c009a 281 SUPERFAMILY SSF55620 185 266 2.0E-9 T 18-10-2018 CH53_1741 096706f5d6935945afbd7643ef2c6aeb 634 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 445 599 5.6E-52 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_1741 096706f5d6935945afbd7643ef2c6aeb 634 SMART SM00283 386 633 2.3E-80 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_1741 096706f5d6935945afbd7643ef2c6aeb 634 Gene3D G3DSA:1.10.287.950 331 634 5.3E-84 T 18-10-2018 CH53_1741 096706f5d6935945afbd7643ef2c6aeb 634 SUPERFAMILY SSF58104 353 634 2.22E-72 T 18-10-2018 CH53_1741 096706f5d6935945afbd7643ef2c6aeb 634 SMART SM00304 331 385 3.7E-6 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_1741 096706f5d6935945afbd7643ef2c6aeb 634 Pfam PF02743 Cache domain 45 292 1.7E-24 T 18-10-2018 IPR033479 Double Cache domain 1 CH53_1741 096706f5d6935945afbd7643ef2c6aeb 634 Gene3D G3DSA:3.30.450.20 35 204 7.3E-19 T 18-10-2018 CH53_3342 ef0411fdd1cb9c343ac6fc379ce73480 105 PIRSF PIRSF028773 1 105 8.0E-49 T 18-10-2018 IPR007458 Protein of unknown function DUF496 CH53_3342 ef0411fdd1cb9c343ac6fc379ce73480 105 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 9 103 25.111 T 18-10-2018 IPR007458 Protein of unknown function DUF496 CH53_3342 ef0411fdd1cb9c343ac6fc379ce73480 105 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 12 99 5.0E-40 T 18-10-2018 IPR007458 Protein of unknown function DUF496 CH53_3342 ef0411fdd1cb9c343ac6fc379ce73480 105 Pfam PF04363 Protein of unknown function (DUF496) 9 100 7.7E-45 T 18-10-2018 IPR007458 Protein of unknown function DUF496 CH53_2303 d7fe1a5aeee4a91d407dac500af770c2 418 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 36.417 T 18-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 CH53_2303 d7fe1a5aeee4a91d407dac500af770c2 418 Gene3D G3DSA:1.10.3860.10 11 404 2.9E-70 T 18-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CH53_2303 d7fe1a5aeee4a91d407dac500af770c2 418 Pfam PF00375 Sodium:dicarboxylate symporter family 17 396 1.6E-63 T 18-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CH53_2303 d7fe1a5aeee4a91d407dac500af770c2 418 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 2.3E-13 T 18-10-2018 CH53_2303 d7fe1a5aeee4a91d407dac500af770c2 418 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 2.3E-13 T 18-10-2018 CH53_2303 d7fe1a5aeee4a91d407dac500af770c2 418 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 2.3E-13 T 18-10-2018 CH53_2303 d7fe1a5aeee4a91d407dac500af770c2 418 PRINTS PR00173 Glutamate-aspartate symporter signature 351 371 2.3E-13 T 18-10-2018 CH53_2303 d7fe1a5aeee4a91d407dac500af770c2 418 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 2.3E-13 T 18-10-2018 CH53_2303 d7fe1a5aeee4a91d407dac500af770c2 418 SUPERFAMILY SSF118215 17 399 1.1E-94 T 18-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CH53_244 94adbad389ec6a5195f66ada5eaee8a2 377 PIRSF PIRSF038994 1 376 2.1E-111 T 18-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CH53_244 94adbad389ec6a5195f66ada5eaee8a2 377 Gene3D G3DSA:3.20.20.140 50 346 2.3E-116 T 18-10-2018 CH53_244 94adbad389ec6a5195f66ada5eaee8a2 377 SUPERFAMILY SSF51338 2 375 6.48E-8 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_244 94adbad389ec6a5195f66ada5eaee8a2 377 Pfam PF01979 Amidohydrolase family 47 366 1.1E-15 T 18-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CH53_244 94adbad389ec6a5195f66ada5eaee8a2 377 SUPERFAMILY SSF51556 51 346 1.67E-92 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_244 94adbad389ec6a5195f66ada5eaee8a2 377 Gene3D G3DSA:2.30.40.10 10 373 2.3E-116 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_244 94adbad389ec6a5195f66ada5eaee8a2 377 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 2 370 2.9E-83 T 18-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CH53_769 908a457c58e1a7152bbadbee2ad0c229 393 Pfam PF07690 Major Facilitator Superfamily 9 234 1.8E-34 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_769 908a457c58e1a7152bbadbee2ad0c229 393 Gene3D G3DSA:1.20.1250.20 196 389 8.4E-25 T 18-10-2018 CH53_769 908a457c58e1a7152bbadbee2ad0c229 393 PRINTS PR01035 Tetracycline resistance protein signature 40 59 7.1E-7 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CH53_769 908a457c58e1a7152bbadbee2ad0c229 393 PRINTS PR01035 Tetracycline resistance protein signature 10 26 7.1E-7 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CH53_769 908a457c58e1a7152bbadbee2ad0c229 393 PRINTS PR01035 Tetracycline resistance protein signature 363 382 7.1E-7 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CH53_769 908a457c58e1a7152bbadbee2ad0c229 393 PRINTS PR01035 Tetracycline resistance protein signature 158 178 7.1E-7 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CH53_769 908a457c58e1a7152bbadbee2ad0c229 393 PRINTS PR01035 Tetracycline resistance protein signature 98 119 7.1E-7 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CH53_769 908a457c58e1a7152bbadbee2ad0c229 393 Gene3D G3DSA:1.20.1250.20 2 195 8.7E-28 T 18-10-2018 CH53_769 908a457c58e1a7152bbadbee2ad0c229 393 SUPERFAMILY SSF103473 3 385 4.19E-65 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_4120 d214525a3f973aea86c202f1224a308a 794 Gene3D G3DSA:3.30.470.20 199 360 1.5E-61 T 18-10-2018 CH53_4120 d214525a3f973aea86c202f1224a308a 794 SUPERFAMILY SSF56059 10 387 5.53E-107 T 18-10-2018 CH53_4120 d214525a3f973aea86c202f1224a308a 794 Gene3D G3DSA:3.30.1490.20 9 198 5.6E-71 T 18-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CH53_4120 d214525a3f973aea86c202f1224a308a 794 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 791 0.0 T 18-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 CH53_4120 d214525a3f973aea86c202f1224a308a 794 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 697 715 - T 18-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CH53_4120 d214525a3f973aea86c202f1224a308a 794 Gene3D G3DSA:3.50.30.10 373 480 3.4E-41 T 18-10-2018 CH53_4120 d214525a3f973aea86c202f1224a308a 794 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 417 428 - T 18-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CH53_4120 d214525a3f973aea86c202f1224a308a 794 SUPERFAMILY SSF52009 351 469 3.01E-35 T 18-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 CH53_4120 d214525a3f973aea86c202f1224a308a 794 PIRSF PIRSF000854 7 794 0.0 T 18-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 CH53_4120 d214525a3f973aea86c202f1224a308a 794 SUPERFAMILY SSF51621 468 792 1.94E-95 T 18-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CH53_4120 d214525a3f973aea86c202f1224a308a 794 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 485 790 9.4E-59 T 18-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CH53_4120 d214525a3f973aea86c202f1224a308a 794 Pfam PF00391 PEP-utilising enzyme, mobile domain 387 458 1.2E-26 T 18-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CH53_4120 d214525a3f973aea86c202f1224a308a 794 Gene3D G3DSA:3.20.20.60 481 793 1.2E-98 T 18-10-2018 CH53_4120 d214525a3f973aea86c202f1224a308a 794 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 348 3.3E-120 T 18-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CH53_1771 3726b946e4fd97c39a811c4cea484fd5 513 SUPERFAMILY SSF52540 96 381 3.47E-96 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1771 3726b946e4fd97c39a811c4cea484fd5 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.222 T 18-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1771 3726b946e4fd97c39a811c4cea484fd5 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 4.0E-45 T 18-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1771 3726b946e4fd97c39a811c4cea484fd5 513 Gene3D G3DSA:3.40.50.300 94 382 2.1E-133 T 18-10-2018 CH53_1771 3726b946e4fd97c39a811c4cea484fd5 513 SUPERFAMILY SSF47917 383 511 1.83E-45 T 18-10-2018 CH53_1771 3726b946e4fd97c39a811c4cea484fd5 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 3.3E-261 T 18-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1771 3726b946e4fd97c39a811c4cea484fd5 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 18-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_1771 3726b946e4fd97c39a811c4cea484fd5 513 Gene3D G3DSA:2.40.30.20 1 93 8.2E-30 T 18-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_1771 3726b946e4fd97c39a811c4cea484fd5 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 18-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_1771 3726b946e4fd97c39a811c4cea484fd5 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 5.1E-74 T 18-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_1771 3726b946e4fd97c39a811c4cea484fd5 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 2.5E-13 T 18-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_1771 3726b946e4fd97c39a811c4cea484fd5 513 Gene3D G3DSA:1.20.150.20 383 513 3.1E-50 T 18-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1734 98aa5b4faeb937b2ed72bd05ebf034b8 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 22 68 1.0E-21 T 18-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CH53_1734 98aa5b4faeb937b2ed72bd05ebf034b8 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 82 2.3E-32 T 18-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CH53_1734 98aa5b4faeb937b2ed72bd05ebf034b8 85 Pfam PF01809 Haemolytic domain 10 75 8.7E-30 T 18-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CH53_1734 98aa5b4faeb937b2ed72bd05ebf034b8 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.648 T 18-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CH53_1734 98aa5b4faeb937b2ed72bd05ebf034b8 85 SMART SM01234 8 75 4.0E-44 T 18-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CH53_4332 c2a10ec954ee3247ad84594c03b9ba87 89 Gene3D G3DSA:1.10.1660.20 3 88 1.8E-24 T 18-10-2018 IPR038137 Excisionase-like superfamily CH53_4332 c2a10ec954ee3247ad84594c03b9ba87 89 Pfam PF07825 Excisionase-like protein 5 87 4.9E-17 T 18-10-2018 IPR012884 Excisionase-like GO:0003677|GO:0006310 CH53_4332 c2a10ec954ee3247ad84594c03b9ba87 89 SUPERFAMILY SSF46955 4 85 4.39E-23 T 18-10-2018 IPR009061 Putative DNA-binding domain superfamily CH53_1680 e6f3c1fc663d2c469a18221b02bbd00d 803 SUPERFAMILY SSF50692 617 803 2.69E-44 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CH53_1680 e6f3c1fc663d2c469a18221b02bbd00d 803 Gene3D G3DSA:3.40.228.10 516 627 4.7E-28 T 18-10-2018 CH53_1680 e6f3c1fc663d2c469a18221b02bbd00d 803 SUPERFAMILY SSF53706 1 638 1.96E-234 T 18-10-2018 CH53_1680 e6f3c1fc663d2c469a18221b02bbd00d 803 Gene3D G3DSA:2.40.40.20 628 803 8.3E-75 T 18-10-2018 CH53_1680 e6f3c1fc663d2c469a18221b02bbd00d 803 Pfam PF01568 Molydopterin dinucleotide binding domain 681 796 2.6E-17 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CH53_1680 e6f3c1fc663d2c469a18221b02bbd00d 803 Pfam PF00384 Molybdopterin oxidoreductase 2 380 8.2E-24 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_1680 e6f3c1fc663d2c469a18221b02bbd00d 803 Gene3D G3DSA:3.40.50.740 291 472 1.9E-58 T 18-10-2018 CH53_1680 e6f3c1fc663d2c469a18221b02bbd00d 803 Gene3D G3DSA:3.40.228.10 1 271 3.1E-72 T 18-10-2018 CH53_1680 e6f3c1fc663d2c469a18221b02bbd00d 803 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 715 742 - T 18-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CH53_1680 e6f3c1fc663d2c469a18221b02bbd00d 803 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 802 0.0 T 18-10-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 CH53_1878 dce7191d9a9f44b63a41f3816fea4969 165 PIRSF PIRSF029256 1 159 6.6E-71 T 18-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 CH53_1878 dce7191d9a9f44b63a41f3816fea4969 165 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 34.174 T 18-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 CH53_1878 dce7191d9a9f44b63a41f3816fea4969 165 Pfam PF00588 SpoU rRNA Methylase family 2 147 3.0E-32 T 18-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CH53_1878 dce7191d9a9f44b63a41f3816fea4969 165 SUPERFAMILY SSF75217 1 157 2.75E-42 T 18-10-2018 IPR029028 Alpha/beta knot methyltransferases CH53_1878 dce7191d9a9f44b63a41f3816fea4969 165 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 157 4.2E-70 T 18-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 CH53_1878 dce7191d9a9f44b63a41f3816fea4969 165 Gene3D G3DSA:3.40.1280.10 1 162 8.9E-76 T 18-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH53_1592 f0cace82aa3ca421f9312770e35b2e5d 298 SUPERFAMILY SSF51658 7 294 4.45E-59 T 18-10-2018 IPR036237 Xylose isomerase-like superfamily CH53_1592 f0cace82aa3ca421f9312770e35b2e5d 298 Pfam PF01261 Xylose isomerase-like TIM barrel 36 250 3.7E-26 T 18-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CH53_1592 f0cace82aa3ca421f9312770e35b2e5d 298 Hamap MF_01672 Inosose dehydratase [iolE]. 1 298 55.648 T 18-10-2018 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 CH53_1592 f0cace82aa3ca421f9312770e35b2e5d 298 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 6 295 1.1E-120 T 18-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 CH53_1592 f0cace82aa3ca421f9312770e35b2e5d 298 Gene3D G3DSA:3.20.20.150 1 296 8.7E-82 T 18-10-2018 CH53_249 1eec30019c6e57c5a39e997d14f897a8 414 Pfam PF03222 Tryptophan/tyrosine permease family 11 402 4.6E-144 T 18-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CH53_249 1eec30019c6e57c5a39e997d14f897a8 414 Gene3D G3DSA:1.20.1740.10 11 414 6.3E-7 T 18-10-2018 CH53_249 1eec30019c6e57c5a39e997d14f897a8 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 16 395 5.6E-147 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_249 1eec30019c6e57c5a39e997d14f897a8 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 1.9E-98 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_249 1eec30019c6e57c5a39e997d14f897a8 414 PRINTS PR00166 Aromatic amino acid permease signature 19 42 1.9E-98 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_249 1eec30019c6e57c5a39e997d14f897a8 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 1.9E-98 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_249 1eec30019c6e57c5a39e997d14f897a8 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 1.9E-98 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_249 1eec30019c6e57c5a39e997d14f897a8 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 1.9E-98 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_249 1eec30019c6e57c5a39e997d14f897a8 414 PRINTS PR00166 Aromatic amino acid permease signature 91 111 1.9E-98 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_249 1eec30019c6e57c5a39e997d14f897a8 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 1.9E-98 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_249 1eec30019c6e57c5a39e997d14f897a8 414 PRINTS PR00166 Aromatic amino acid permease signature 46 65 1.9E-98 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_249 1eec30019c6e57c5a39e997d14f897a8 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 1.9E-98 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_1354 0acee9ed1ba0cd1ea5bf4874e0a28364 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_1354 0acee9ed1ba0cd1ea5bf4874e0a28364 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 8.1E-12 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_1354 0acee9ed1ba0cd1ea5bf4874e0a28364 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 18-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CH53_1354 0acee9ed1ba0cd1ea5bf4874e0a28364 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 1.9E-31 T 18-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_1354 0acee9ed1ba0cd1ea5bf4874e0a28364 244 SUPERFAMILY SSF46548 107 229 1.38E-31 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CH53_1354 0acee9ed1ba0cd1ea5bf4874e0a28364 244 Gene3D G3DSA:3.10.20.30 3 106 1.2E-34 T 18-10-2018 IPR012675 Beta-grasp domain superfamily CH53_1354 0acee9ed1ba0cd1ea5bf4874e0a28364 244 Gene3D G3DSA:1.10.1060.10 107 244 6.3E-52 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CH53_1354 0acee9ed1ba0cd1ea5bf4874e0a28364 244 SUPERFAMILY SSF54292 4 106 2.02E-29 T 18-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CH53_1354 0acee9ed1ba0cd1ea5bf4874e0a28364 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 6.6E-98 T 18-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_165 187c915f0da764506797081808dc9304 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 2.0E-64 T 18-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal CH53_165 187c915f0da764506797081808dc9304 447 Gene3D G3DSA:3.40.50.300 1 164 2.5E-47 T 18-10-2018 CH53_165 187c915f0da764506797081808dc9304 447 Pfam PF16193 AAA C-terminal domain 188 267 9.0E-22 T 18-10-2018 IPR032423 AAA C-terminal domain CH53_165 187c915f0da764506797081808dc9304 447 SUPERFAMILY SSF52540 6 234 1.56E-42 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_165 187c915f0da764506797081808dc9304 447 Gene3D G3DSA:1.10.3710.10 346 447 8.9E-38 T 18-10-2018 CH53_165 187c915f0da764506797081808dc9304 447 Gene3D G3DSA:1.10.8.60 165 240 2.7E-28 T 18-10-2018 CH53_165 187c915f0da764506797081808dc9304 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 3.8E-15 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CH53_165 187c915f0da764506797081808dc9304 447 SMART SM00382 49 165 4.6E-17 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_165 187c915f0da764506797081808dc9304 447 Gene3D G3DSA:1.20.272.10 241 345 1.6E-43 T 18-10-2018 CH53_165 187c915f0da764506797081808dc9304 447 SUPERFAMILY SSF48019 252 434 2.44E-70 T 18-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CH53_4345 78a9be52df2ea13a0e524f0b3711c80a 106 Gene3D G3DSA:1.10.10.710 21 82 1.7E-11 T 18-10-2018 IPR038627 YebG-like superfamily CH53_4345 78a9be52df2ea13a0e524f0b3711c80a 106 Pfam PF07130 YebG protein 1 74 5.7E-34 T 18-10-2018 IPR009813 Uncharacterised protein family YebG CH53_2279 741c68f9bbc8407022fc512186e85565 299 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.03 T 18-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CH53_2279 741c68f9bbc8407022fc512186e85565 299 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 3.3E-26 T 18-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CH53_2279 741c68f9bbc8407022fc512186e85565 299 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 6.7E-110 T 18-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CH53_2279 741c68f9bbc8407022fc512186e85565 299 PIRSF PIRSF005917 2 288 6.8E-106 T 18-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CH53_2279 741c68f9bbc8407022fc512186e85565 299 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 18-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 CH53_2279 741c68f9bbc8407022fc512186e85565 299 SUPERFAMILY SSF53790 13 232 1.13E-82 T 18-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CH53_2279 741c68f9bbc8407022fc512186e85565 299 Gene3D G3DSA:3.30.950.10 121 241 1.2E-41 T 18-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CH53_2279 741c68f9bbc8407022fc512186e85565 299 Gene3D G3DSA:3.40.1010.10 2 120 1.9E-46 T 18-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CH53_4035 fa5f575796bd0cb2c1c694fda1c12d99 107 Gene3D G3DSA:1.10.260.40 22 99 1.7E-15 T 18-10-2018 CH53_4035 fa5f575796bd0cb2c1c694fda1c12d99 107 Pfam PF01381 Helix-turn-helix 42 93 5.4E-13 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_4035 fa5f575796bd0cb2c1c694fda1c12d99 107 SMART SM00530 41 96 3.2E-11 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_4035 fa5f575796bd0cb2c1c694fda1c12d99 107 SUPERFAMILY SSF47413 30 101 1.42E-13 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_2410 12f220f9154fc438d60fb68385798a3b 148 Gene3D G3DSA:3.30.1460.40 1 122 7.2E-43 T 18-10-2018 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily CH53_2410 12f220f9154fc438d60fb68385798a3b 148 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 2 140 1.3E-53 T 18-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE CH53_2410 12f220f9154fc438d60fb68385798a3b 148 Pfam PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE 2 141 2.1E-44 T 18-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE CH53_2410 12f220f9154fc438d60fb68385798a3b 148 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 2 140 9.0E-41 T 18-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE CH53_3587 b699cf140e65bdd2857c4eb430d2760e 120 Hamap MF_01180 Flagellar protein FliT [fliT]. 1 120 26.056 T 18-10-2018 IPR008622 Flagellar protein FliT CH53_3587 b699cf140e65bdd2857c4eb430d2760e 120 Gene3D G3DSA:1.20.58.380 2 110 3.0E-34 T 18-10-2018 CH53_3587 b699cf140e65bdd2857c4eb430d2760e 120 Pfam PF05400 Flagellar protein FliT 21 106 3.7E-20 T 18-10-2018 IPR008622 Flagellar protein FliT CH53_2912 968e240caa03f4d6e220339548c22030 634 SUPERFAMILY SSF51735 142 268 1.65E-14 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2912 968e240caa03f4d6e220339548c22030 634 Pfam PF02719 Polysaccharide biosynthesis protein 281 573 1.5E-127 T 18-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CH53_2912 968e240caa03f4d6e220339548c22030 634 Gene3D G3DSA:3.40.50.720 141 262 5.7E-31 T 18-10-2018 CH53_2912 968e240caa03f4d6e220339548c22030 634 Pfam PF13727 CoA-binding domain 67 236 2.3E-12 T 18-10-2018 CH53_2912 968e240caa03f4d6e220339548c22030 634 Gene3D G3DSA:3.40.50.720 276 607 8.1E-114 T 18-10-2018 CH53_2912 968e240caa03f4d6e220339548c22030 634 SUPERFAMILY SSF51735 279 578 5.43E-53 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3144 2e5ae78fed0615724b5d378150e220b0 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.316 T 18-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CH53_3144 2e5ae78fed0615724b5d378150e220b0 388 Pfam PF08442 ATP-grasp domain 2 203 2.4E-83 T 18-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CH53_3144 2e5ae78fed0615724b5d378150e220b0 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 384 1.3E-181 T 18-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CH53_3144 2e5ae78fed0615724b5d378150e220b0 388 SUPERFAMILY SSF56059 1 238 6.89E-81 T 18-10-2018 CH53_3144 2e5ae78fed0615724b5d378150e220b0 388 SUPERFAMILY SSF52210 240 385 1.83E-52 T 18-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CH53_3144 2e5ae78fed0615724b5d378150e220b0 388 PIRSF PIRSF001554 1 388 2.5E-155 T 18-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CH53_3144 2e5ae78fed0615724b5d378150e220b0 388 Pfam PF00549 CoA-ligase 262 382 1.6E-24 T 18-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CH53_3144 2e5ae78fed0615724b5d378150e220b0 388 Gene3D G3DSA:3.30.1490.20 21 104 2.5E-97 T 18-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CH53_3144 2e5ae78fed0615724b5d378150e220b0 388 Gene3D G3DSA:3.40.50.261 240 387 2.5E-55 T 18-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CH53_3144 2e5ae78fed0615724b5d378150e220b0 388 Gene3D G3DSA:3.30.470.20 1 234 2.5E-97 T 18-10-2018 CH53_3144 2e5ae78fed0615724b5d378150e220b0 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 18-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CH53_3796 e2bf9bdcb3e65a933e02d078e71c7b22 598 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 1.1E-17 T 18-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CH53_3796 e2bf9bdcb3e65a933e02d078e71c7b22 598 Pfam PF02938 GAD domain 307 406 7.0E-30 T 18-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 CH53_3796 e2bf9bdcb3e65a933e02d078e71c7b22 598 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 8.5E-108 T 18-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3796 e2bf9bdcb3e65a933e02d078e71c7b22 598 Gene3D G3DSA:3.30.930.10 118 578 4.5E-199 T 18-10-2018 CH53_3796 e2bf9bdcb3e65a933e02d078e71c7b22 598 Gene3D G3DSA:3.30.1360.30 271 420 4.5E-199 T 18-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CH53_3796 e2bf9bdcb3e65a933e02d078e71c7b22 598 SUPERFAMILY SSF55681 108 583 4.44E-104 T 18-10-2018 CH53_3796 e2bf9bdcb3e65a933e02d078e71c7b22 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.3E-26 T 18-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3796 e2bf9bdcb3e65a933e02d078e71c7b22 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.3E-26 T 18-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3796 e2bf9bdcb3e65a933e02d078e71c7b22 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.3E-26 T 18-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3796 e2bf9bdcb3e65a933e02d078e71c7b22 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.3E-26 T 18-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3796 e2bf9bdcb3e65a933e02d078e71c7b22 598 SUPERFAMILY SSF50249 1 105 3.81E-34 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_3796 e2bf9bdcb3e65a933e02d078e71c7b22 598 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 8.4E-274 T 18-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CH53_3796 e2bf9bdcb3e65a933e02d078e71c7b22 598 Gene3D G3DSA:2.40.50.140 1 106 1.7E-35 T 18-10-2018 CH53_3796 e2bf9bdcb3e65a933e02d078e71c7b22 598 SUPERFAMILY SSF55261 288 419 6.54E-46 T 18-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CH53_3796 e2bf9bdcb3e65a933e02d078e71c7b22 598 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.629 T 18-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CH53_1277 ed4eb120ad0ba8f8faa8db204c754be7 317 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 248 3.3E-23 T 18-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 CH53_1277 ed4eb120ad0ba8f8faa8db204c754be7 317 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 9.0E-58 T 18-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CH53_1277 ed4eb120ad0ba8f8faa8db204c754be7 317 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 8.0E-21 T 18-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_1277 ed4eb120ad0ba8f8faa8db204c754be7 317 Gene3D G3DSA:3.30.2350.10 1 249 1.6E-93 T 18-10-2018 CH53_1277 ed4eb120ad0ba8f8faa8db204c754be7 317 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 3.4E-90 T 18-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_1277 ed4eb120ad0ba8f8faa8db204c754be7 317 SUPERFAMILY SSF55120 10 248 2.88E-82 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_1277 ed4eb120ad0ba8f8faa8db204c754be7 317 Gene3D G3DSA:2.30.130.10 250 314 6.8E-28 T 18-10-2018 IPR036974 PUA domain superfamily GO:0003723 CH53_1277 ed4eb120ad0ba8f8faa8db204c754be7 317 SUPERFAMILY SSF88697 251 310 2.39E-14 T 18-10-2018 IPR015947 PUA-like superfamily CH53_1277 ed4eb120ad0ba8f8faa8db204c754be7 317 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.906 T 18-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_2016 8db0a20ea005cc223c5a74f5d5b1584a 551 Gene3D G3DSA:1.10.10.1100 421 493 1.8E-17 T 18-10-2018 CH53_2016 8db0a20ea005cc223c5a74f5d5b1584a 551 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 15 32 - T 18-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_2016 8db0a20ea005cc223c5a74f5d5b1584a 551 SUPERFAMILY SSF51905 10 323 1.02E-45 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2016 8db0a20ea005cc223c5a74f5d5b1584a 551 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 353 363 - T 18-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_2016 8db0a20ea005cc223c5a74f5d5b1584a 551 Gene3D G3DSA:3.50.50.60 11 367 3.6E-80 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2016 8db0a20ea005cc223c5a74f5d5b1584a 551 Pfam PF01266 FAD dependent oxidoreductase 11 360 4.8E-56 T 18-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CH53_2016 8db0a20ea005cc223c5a74f5d5b1584a 551 Gene3D G3DSA:3.30.9.10 87 319 3.6E-80 T 18-10-2018 CH53_2016 8db0a20ea005cc223c5a74f5d5b1584a 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 23 33 7.3E-22 T 18-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_2016 8db0a20ea005cc223c5a74f5d5b1584a 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 348 360 7.3E-22 T 18-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_2016 8db0a20ea005cc223c5a74f5d5b1584a 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 10 22 7.3E-22 T 18-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_2016 8db0a20ea005cc223c5a74f5d5b1584a 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 312 318 7.3E-22 T 18-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_2016 8db0a20ea005cc223c5a74f5d5b1584a 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 39 51 7.3E-22 T 18-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_2016 8db0a20ea005cc223c5a74f5d5b1584a 551 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 11 539 1.8E-268 T 18-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CH53_2016 8db0a20ea005cc223c5a74f5d5b1584a 551 Pfam PF04324 BFD-like [2Fe-2S] binding domain 433 484 6.7E-10 T 18-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CH53_23 168c6b33d22534d945723e017078302c 355 Gene3D G3DSA:3.30.70.100 13 118 2.0E-14 T 18-10-2018 CH53_23 168c6b33d22534d945723e017078302c 355 SUPERFAMILY SSF52821 124 268 5.76E-31 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily CH53_23 168c6b33d22534d945723e017078302c 355 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 38.714 T 18-10-2018 IPR020936 Uncharacterised protein family UPF0176 CH53_23 168c6b33d22534d945723e017078302c 355 SMART SM00450 136 237 9.3E-27 T 18-10-2018 IPR001763 Rhodanese-like domain CH53_23 168c6b33d22534d945723e017078302c 355 Pfam PF12368 Rhodanase C-terminal 246 308 2.7E-19 T 18-10-2018 IPR022111 Rhodanase, C-terminal CH53_23 168c6b33d22534d945723e017078302c 355 Gene3D G3DSA:3.40.250.10 125 271 1.1E-43 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily CH53_23 168c6b33d22534d945723e017078302c 355 Pfam PF00581 Rhodanese-like domain 138 233 2.3E-15 T 18-10-2018 IPR001763 Rhodanese-like domain CH53_962 ba4053825d1ada4d88178b0372f16c6f 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CH53_962 ba4053825d1ada4d88178b0372f16c6f 426 SUPERFAMILY SSF53383 2 425 8.58E-136 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_962 ba4053825d1ada4d88178b0372f16c6f 426 Gene3D G3DSA:3.90.1150.10 7 419 3.2E-179 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_962 ba4053825d1ada4d88178b0372f16c6f 426 Gene3D G3DSA:3.40.640.10 69 317 3.2E-179 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_962 ba4053825d1ada4d88178b0372f16c6f 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 7.9E-201 T 18-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CH53_962 ba4053825d1ada4d88178b0372f16c6f 426 Pfam PF00202 Aminotransferase class-III 32 396 1.4E-78 T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CH53_962 ba4053825d1ada4d88178b0372f16c6f 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 106.185 T 18-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CH53_3816 c683ac9e8e191c568d81278d6c7d91ff 634 SMART SM00491 474 603 2.4E-54 T 18-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CH53_3816 c683ac9e8e191c568d81278d6c7d91ff 634 SUPERFAMILY SSF52540 13 232 1.12E-23 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3816 c683ac9e8e191c568d81278d6c7d91ff 634 SUPERFAMILY SSF52540 40 597 2.6E-9 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3816 c683ac9e8e191c568d81278d6c7d91ff 634 Gene3D G3DSA:3.40.50.300 440 632 6.5E-36 T 18-10-2018 CH53_3816 c683ac9e8e191c568d81278d6c7d91ff 634 SMART SM00487 16 342 0.0038 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH53_3816 c683ac9e8e191c568d81278d6c7d91ff 634 Pfam PF06733 DEAD_2 181 247 6.7E-5 T 18-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 CH53_3816 c683ac9e8e191c568d81278d6c7d91ff 634 Pfam PF13307 Helicase C-terminal domain 459 616 3.4E-34 T 18-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CH53_3816 c683ac9e8e191c568d81278d6c7d91ff 634 Gene3D G3DSA:3.40.50.300 18 283 6.2E-46 T 18-10-2018 CH53_3432 1e10ac3bbba01f0aa1ebb7da622d852a 870 Gene3D G3DSA:2.60.40.2070 775 870 1.8E-14 T 18-10-2018 CH53_3432 1e10ac3bbba01f0aa1ebb7da622d852a 870 Gene3D G3DSA:2.60.40.3110 262 351 2.2E-36 T 18-10-2018 CH53_3432 1e10ac3bbba01f0aa1ebb7da622d852a 870 Pfam PF13954 PapC N-terminal domain 34 173 1.3E-33 T 18-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 CH53_3432 1e10ac3bbba01f0aa1ebb7da622d852a 870 Gene3D G3DSA:2.60.40.2610 683 773 3.0E-27 T 18-10-2018 CH53_3432 1e10ac3bbba01f0aa1ebb7da622d852a 870 Pfam PF00577 Outer membrane usher protein 192 768 7.8E-138 T 18-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 CH53_3432 1e10ac3bbba01f0aa1ebb7da622d852a 870 Gene3D G3DSA:3.10.20.410 31 151 4.1E-25 T 18-10-2018 CH53_3432 1e10ac3bbba01f0aa1ebb7da622d852a 870 Pfam PF13953 PapC C-terminal domain 777 849 5.5E-17 T 18-10-2018 IPR025949 PapC-like, C-terminal domain CH53_3432 1e10ac3bbba01f0aa1ebb7da622d852a 870 SUPERFAMILY SSF141729 31 151 1.96E-27 T 18-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 CH53_81 38e7402b4fc877122fab1df50df51818 143 Gene3D G3DSA:3.30.565.10 1 143 1.0E-13 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_81 38e7402b4fc877122fab1df50df51818 143 Pfam PF13581 Histidine kinase-like ATPase domain 12 136 2.4E-16 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_81 38e7402b4fc877122fab1df50df51818 143 SUPERFAMILY SSF55874 25 122 3.3E-8 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3446 bcc532185af78e2965f6c09402eeaa32 357 SUPERFAMILY SSF52374 143 333 2.0E-25 T 18-10-2018 CH53_3446 bcc532185af78e2965f6c09402eeaa32 357 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 145 200 1.6E-9 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CH53_3446 bcc532185af78e2965f6c09402eeaa32 357 PIRSF PIRSF005751 1 349 2.6E-136 T 18-10-2018 IPR005216 Citrate lyase ligase GO:0008771 CH53_3446 bcc532185af78e2965f6c09402eeaa32 357 SUPERFAMILY SSF55729 36 115 8.83E-9 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_3446 bcc532185af78e2965f6c09402eeaa32 357 Pfam PF08218 Citrate lyase ligase C-terminal domain 145 331 9.9E-79 T 18-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CH53_3446 bcc532185af78e2965f6c09402eeaa32 357 SMART SM00764 145 331 1.1E-125 T 18-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CH53_3446 bcc532185af78e2965f6c09402eeaa32 357 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 111 335 2.0E-95 T 18-10-2018 CH53_3446 bcc532185af78e2965f6c09402eeaa32 357 Gene3D G3DSA:3.40.630.30 4 121 2.3E-7 T 18-10-2018 CH53_3446 bcc532185af78e2965f6c09402eeaa32 357 Gene3D G3DSA:3.40.50.620 141 350 1.4E-16 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_3446 bcc532185af78e2965f6c09402eeaa32 357 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 9 337 1.9E-155 T 18-10-2018 IPR005216 Citrate lyase ligase GO:0008771 CH53_543 32a1e94d97eaa41867fb81760db81309 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 6 269 2.0E-111 T 18-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CH53_543 32a1e94d97eaa41867fb81760db81309 277 Gene3D G3DSA:1.10.3720.10 14 272 1.2E-69 T 18-10-2018 IPR035906 MetI-like superfamily CH53_543 32a1e94d97eaa41867fb81760db81309 277 SUPERFAMILY SSF161098 17 265 4.32E-57 T 18-10-2018 IPR035906 MetI-like superfamily CH53_543 32a1e94d97eaa41867fb81760db81309 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 271 2.4E-115 T 18-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 CH53_543 32a1e94d97eaa41867fb81760db81309 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 1.8E-29 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_3656 3b4fc4ace41513ef08f5d631bf4a52cf 259 SUPERFAMILY SSF51735 8 255 8.59E-58 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3656 3b4fc4ace41513ef08f5d631bf4a52cf 259 Gene3D G3DSA:3.40.50.720 4 259 7.1E-65 T 18-10-2018 CH53_3656 3b4fc4ace41513ef08f5d631bf4a52cf 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 254 1.1E-39 T 18-10-2018 CH53_3656 3b4fc4ace41513ef08f5d631bf4a52cf 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.9E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3656 3b4fc4ace41513ef08f5d631bf4a52cf 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 3.9E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3656 3b4fc4ace41513ef08f5d631bf4a52cf 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 3.9E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3656 3b4fc4ace41513ef08f5d631bf4a52cf 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CH53_3656 3b4fc4ace41513ef08f5d631bf4a52cf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.2E-31 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3656 3b4fc4ace41513ef08f5d631bf4a52cf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.2E-31 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3656 3b4fc4ace41513ef08f5d631bf4a52cf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.2E-31 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3656 3b4fc4ace41513ef08f5d631bf4a52cf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.2E-31 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3656 3b4fc4ace41513ef08f5d631bf4a52cf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.2E-31 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3656 3b4fc4ace41513ef08f5d631bf4a52cf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.2E-31 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2136 2e2f349d8749d8bf9aad16fff026c4e2 556 Pfam PF17287 POTRA domain 155 205 3.3E-14 T 18-10-2018 IPR035251 ShlB, POTRA domain CH53_2136 2e2f349d8749d8bf9aad16fff026c4e2 556 Gene3D G3DSA:3.10.20.310 81 156 1.2E-7 T 18-10-2018 CH53_2136 2e2f349d8749d8bf9aad16fff026c4e2 556 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 210 518 2.6E-96 T 18-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal CH53_2136 2e2f349d8749d8bf9aad16fff026c4e2 556 Gene3D G3DSA:2.40.160.50 182 556 1.2E-76 T 18-10-2018 CH53_2136 2e2f349d8749d8bf9aad16fff026c4e2 556 PIRSF PIRSF029745 1 556 1.6E-128 T 18-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 CH53_2136 2e2f349d8749d8bf9aad16fff026c4e2 556 Pfam PF08479 POTRA domain, ShlB-type 80 153 2.4E-18 T 18-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type CH53_3386 ac62d63f1494af85d6cec6fff27f3ed9 225 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 16 215 5.1E-50 T 18-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 CH53_3386 ac62d63f1494af85d6cec6fff27f3ed9 225 Pfam PF02361 Cobalt transport protein 14 221 3.4E-44 T 18-10-2018 IPR003339 ABC/ECF transporter, transmembrane component CH53_130 c6437222b8bf45088ed27fe0b2e25def 401 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 395 8.7E-166 T 18-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CH53_130 c6437222b8bf45088ed27fe0b2e25def 401 SUPERFAMILY SSF51690 120 392 2.35E-86 T 18-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CH53_130 c6437222b8bf45088ed27fe0b2e25def 401 Gene3D G3DSA:3.20.140.10 1 401 6.5E-170 T 18-10-2018 CH53_130 c6437222b8bf45088ed27fe0b2e25def 401 PIRSF PIRSF000484 1 380 4.5E-60 T 18-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CH53_130 c6437222b8bf45088ed27fe0b2e25def 401 SUPERFAMILY SSF54675 4 136 9.71E-43 T 18-10-2018 CH53_130 c6437222b8bf45088ed27fe0b2e25def 401 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 394 1.8E-80 T 18-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CH53_130 c6437222b8bf45088ed27fe0b2e25def 401 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 396 48.65 T 18-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CH53_2634 83830aa117766d8c0d14f326d7b2e0d6 299 Gene3D G3DSA:1.10.443.10 111 293 2.2E-79 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CH53_2634 83830aa117766d8c0d14f326d7b2e0d6 299 SUPERFAMILY SSF47823 5 101 1.24E-36 T 18-10-2018 CH53_2634 83830aa117766d8c0d14f326d7b2e0d6 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 299 59.222 T 18-10-2018 IPR023009 Tyrosine recombinase XerC/XerD CH53_2634 83830aa117766d8c0d14f326d7b2e0d6 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 4.2E-24 T 18-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CH53_2634 83830aa117766d8c0d14f326d7b2e0d6 299 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 10 299 5.1E-120 T 18-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CH53_2634 83830aa117766d8c0d14f326d7b2e0d6 299 Pfam PF00589 Phage integrase family 114 285 5.5E-56 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CH53_2634 83830aa117766d8c0d14f326d7b2e0d6 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 299 64.572 T 18-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CH53_2634 83830aa117766d8c0d14f326d7b2e0d6 299 SUPERFAMILY SSF56349 107 297 1.41E-58 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CH53_2634 83830aa117766d8c0d14f326d7b2e0d6 299 Gene3D G3DSA:1.10.150.130 5 100 1.6E-21 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal CH53_1968 3219e7d2d3cd2a21a1f7da2b2c82a7f3 497 Gene3D G3DSA:3.30.420.150 112 289 2.1E-87 T 18-10-2018 CH53_1968 3219e7d2d3cd2a21a1f7da2b2c82a7f3 497 Gene3D G3DSA:1.10.3210.10 305 497 1.2E-48 T 18-10-2018 CH53_1968 3219e7d2d3cd2a21a1f7da2b2c82a7f3 497 PIRSF PIRSF001267 1 496 3.6E-180 T 18-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CH53_1968 3219e7d2d3cd2a21a1f7da2b2c82a7f3 497 SUPERFAMILY SSF53067 7 128 3.56E-38 T 18-10-2018 CH53_1968 3219e7d2d3cd2a21a1f7da2b2c82a7f3 497 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 8 300 2.6E-93 T 18-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 CH53_1968 3219e7d2d3cd2a21a1f7da2b2c82a7f3 497 Pfam PF02541 Ppx/GppA phosphatase family 21 301 7.9E-96 T 18-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CH53_1968 3219e7d2d3cd2a21a1f7da2b2c82a7f3 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 494 53.92 T 18-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 CH53_1968 3219e7d2d3cd2a21a1f7da2b2c82a7f3 497 SUPERFAMILY SSF53067 132 300 8.42E-42 T 18-10-2018 CH53_1968 3219e7d2d3cd2a21a1f7da2b2c82a7f3 497 SUPERFAMILY SSF109604 307 494 4.39E-45 T 18-10-2018 CH53_1968 3219e7d2d3cd2a21a1f7da2b2c82a7f3 497 Gene3D G3DSA:3.30.420.40 9 297 2.1E-87 T 18-10-2018 CH53_3823 05a1103de51fea5da667394904dce828 228 SUPERFAMILY SSF63848 122 227 5.89E-31 T 18-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 CH53_3823 05a1103de51fea5da667394904dce828 228 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 124 224 1.9E-30 T 18-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CH53_3823 05a1103de51fea5da667394904dce828 228 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 228 28.68 T 18-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CH53_3823 05a1103de51fea5da667394904dce828 228 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 3.3E-34 T 18-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 CH53_3823 05a1103de51fea5da667394904dce828 228 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 227 2.4E-72 T 18-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CH53_3823 05a1103de51fea5da667394904dce828 228 Gene3D G3DSA:3.30.750.120 1 114 2.5E-41 T 18-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily CH53_3823 05a1103de51fea5da667394904dce828 228 Gene3D G3DSA:2.160.20.70 119 228 5.5E-29 T 18-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 CH53_232 b93a7f7c300c8594b55f19e81b0b37ce 561 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 109 190 3.8E-18 T 18-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CH53_232 b93a7f7c300c8594b55f19e81b0b37ce 561 Pfam PF02378 Phosphotransferase system, EIIC 232 495 1.2E-15 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_232 b93a7f7c300c8594b55f19e81b0b37ce 561 SUPERFAMILY SSF52794 4 88 2.88E-10 T 18-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CH53_232 b93a7f7c300c8594b55f19e81b0b37ce 561 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 217 551 1.6E-142 T 18-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CH53_232 b93a7f7c300c8594b55f19e81b0b37ce 561 Gene3D G3DSA:3.40.50.2300 97 207 1.3E-37 T 18-10-2018 CH53_232 b93a7f7c300c8594b55f19e81b0b37ce 561 SUPERFAMILY SSF52794 106 206 2.62E-34 T 18-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CH53_232 b93a7f7c300c8594b55f19e81b0b37ce 561 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 108 191 2.8E-39 T 18-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 CH53_2020 ff8f497dc42646c3913e4fc35f599ff3 226 Hamap MF_02088 Probable queuosine precursor transporter. 7 213 15.185 T 18-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 CH53_2020 ff8f497dc42646c3913e4fc35f599ff3 226 Pfam PF02592 Putative vitamin uptake transporter 43 199 4.2E-33 T 18-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 CH53_2020 ff8f497dc42646c3913e4fc35f599ff3 226 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 9.0E-61 T 18-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 CH53_1317 89d68624e563d51f791ec48d93fdd95d 246 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 1 246 41.12 T 18-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 CH53_1317 89d68624e563d51f791ec48d93fdd95d 246 Pfam PF00459 Inositol monophosphatase family 3 232 3.6E-47 T 18-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CH53_1317 89d68624e563d51f791ec48d93fdd95d 246 Gene3D G3DSA:3.30.540.10 1 146 5.7E-44 T 18-10-2018 CH53_1317 89d68624e563d51f791ec48d93fdd95d 246 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 204 218 - T 18-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CH53_1317 89d68624e563d51f791ec48d93fdd95d 246 SUPERFAMILY SSF56655 1 242 1.44E-73 T 18-10-2018 CH53_1317 89d68624e563d51f791ec48d93fdd95d 246 Gene3D G3DSA:3.40.190.80 147 245 2.0E-32 T 18-10-2018 CH53_1317 89d68624e563d51f791ec48d93fdd95d 246 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 244 8.4E-104 T 18-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 CH53_1317 89d68624e563d51f791ec48d93fdd95d 246 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 18-10-2018 IPR020583 Inositol monophosphatase, metal-binding site CH53_2820 c48a2399677e980d0fe599ec1fde5d16 412 Gene3D G3DSA:3.30.160.720 283 345 8.0E-25 T 18-10-2018 CH53_2820 c48a2399677e980d0fe599ec1fde5d16 412 Pfam PF00149 Calcineurin-like phosphoesterase 1 97 2.6E-13 T 18-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CH53_2820 c48a2399677e980d0fe599ec1fde5d16 412 SUPERFAMILY SSF56300 1 340 1.99E-57 T 18-10-2018 CH53_2820 c48a2399677e980d0fe599ec1fde5d16 412 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 259 8.7E-77 T 18-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 CH53_2820 c48a2399677e980d0fe599ec1fde5d16 412 Gene3D G3DSA:3.60.21.10 1 281 1.1E-87 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like CH53_2820 c48a2399677e980d0fe599ec1fde5d16 412 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 282 378 1.4E-23 T 18-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CH53_4099 a8bc01ccda7ba073d0e34b699b225a77 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 18-10-2018 CH53_4099 a8bc01ccda7ba073d0e34b699b225a77 341 Gene3D G3DSA:3.40.50.2300 162 324 9.6E-101 T 18-10-2018 CH53_4099 a8bc01ccda7ba073d0e34b699b225a77 341 Gene3D G3DSA:3.40.50.2300 69 323 9.6E-101 T 18-10-2018 CH53_4099 a8bc01ccda7ba073d0e34b699b225a77 341 SUPERFAMILY SSF47413 1 59 2.25E-16 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_4099 a8bc01ccda7ba073d0e34b699b225a77 341 Gene3D G3DSA:1.10.260.40 3 59 4.2E-25 T 18-10-2018 CH53_4099 a8bc01ccda7ba073d0e34b699b225a77 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 63.329 T 18-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 CH53_4099 a8bc01ccda7ba073d0e34b699b225a77 341 SUPERFAMILY SSF53822 60 340 8.05E-95 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_4099 a8bc01ccda7ba073d0e34b699b225a77 341 SMART SM00354 1 71 2.0E-36 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_4099 a8bc01ccda7ba073d0e34b699b225a77 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.6E-6 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_4099 a8bc01ccda7ba073d0e34b699b225a77 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.6E-6 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_4099 a8bc01ccda7ba073d0e34b699b225a77 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.8E-18 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_4099 a8bc01ccda7ba073d0e34b699b225a77 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 3.9E-41 T 18-10-2018 CH53_145 99c2d648fb70ca57d765e57cee4aafd4 60 Gene3D G3DSA:2.20.25.10 8 60 1.4E-23 T 18-10-2018 CH53_145 99c2d648fb70ca57d765e57cee4aafd4 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.097 T 18-10-2018 IPR038053 Uncharacterised protein family UPF0434 CH53_145 99c2d648fb70ca57d765e57cee4aafd4 60 Pfam PF03966 Trm112p-like protein 2 41 1.6E-9 T 18-10-2018 IPR005651 Trm112-like CH53_145 99c2d648fb70ca57d765e57cee4aafd4 60 SUPERFAMILY SSF158997 1 54 4.97E-20 T 18-10-2018 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Pfam PF00512 His Kinase A (phospho-acceptor) domain 769 834 4.2E-18 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SMART SM00086 578 620 1.0E-7 T 18-10-2018 IPR001610 PAC motif CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SMART SM00086 708 749 0.057 T 18-10-2018 IPR001610 PAC motif CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SMART SM00086 450 492 1.4E-8 T 18-10-2018 IPR001610 PAC motif CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SUPERFAMILY SSF55874 823 995 2.23E-41 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Pfam PF03924 CHASE domain 92 268 8.4E-43 T 18-10-2018 IPR006189 CHASE domain CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Pfam PF00072 Response regulator receiver domain 1174 1286 7.0E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Pfam PF00072 Response regulator receiver domain 1025 1143 2.4E-16 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SUPERFAMILY SSF47226 1269 1411 2.36E-15 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SUPERFAMILY SSF55785 515 617 2.79E-27 T 18-10-2018 IPR035965 PAS domain superfamily CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Gene3D G3DSA:1.20.120.160 1317 1425 2.8E-15 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SUPERFAMILY SSF47384 756 836 1.57E-20 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Pfam PF13426 PAS domain 517 619 2.1E-14 T 18-10-2018 IPR000014 PAS domain CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Pfam PF13426 PAS domain 388 491 2.0E-15 T 18-10-2018 IPR000014 PAS domain CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Gene3D G3DSA:3.30.565.10 836 998 1.3E-46 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SMART SM00091 504 576 1.3E-4 T 18-10-2018 IPR000014 PAS domain CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SMART SM00091 632 702 6.1 T 18-10-2018 IPR000014 PAS domain CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SMART SM00091 377 444 1.0E-4 T 18-10-2018 IPR000014 PAS domain CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SUPERFAMILY SSF55785 385 492 3.32E-24 T 18-10-2018 IPR035965 PAS domain superfamily CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SMART SM01079 89 281 7.5E-50 T 18-10-2018 IPR006189 CHASE domain CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 981 994 4.5E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 922 936 4.5E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 957 975 4.5E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 940 950 4.5E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Gene3D G3DSA:3.40.50.2300 1014 1160 4.1E-26 T 18-10-2018 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Gene3D G3DSA:1.10.287.130 755 835 2.6E-25 T 18-10-2018 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Pfam PF08447 PAS fold 656 743 9.8E-12 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SUPERFAMILY SSF55785 639 752 9.25E-15 T 18-10-2018 IPR035965 PAS domain superfamily CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SUPERFAMILY SSF52172 1169 1292 1.71E-38 T 18-10-2018 IPR011006 CheY-like superfamily CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SUPERFAMILY SSF52172 1021 1153 1.99E-25 T 18-10-2018 IPR011006 CheY-like superfamily CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Gene3D G3DSA:3.30.450.350 93 296 3.8E-26 T 18-10-2018 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SMART SM00388 769 834 7.9E-22 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Gene3D G3DSA:3.30.450.20 372 514 3.5E-35 T 18-10-2018 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Gene3D G3DSA:3.30.450.20 515 642 2.4E-32 T 18-10-2018 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SMART SM00448 1171 1286 8.3E-39 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SMART SM00448 1023 1144 3.4E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 SMART SM00387 881 999 1.8E-31 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Gene3D G3DSA:3.30.450.20 643 754 7.4E-18 T 18-10-2018 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Gene3D G3DSA:3.40.50.2300 1161 1296 9.3E-42 T 18-10-2018 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Pfam PF01627 Hpt domain 1339 1413 5.2E-7 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 881 995 1.3E-25 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 518 627 3.4E-17 T 18-10-2018 IPR000014 PAS domain CH53_75 b68903df2f0d28dcc08f3e6d83576c3c 1521 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 375 499 8.9E-19 T 18-10-2018 IPR000014 PAS domain CH53_1068 e8115f0f8920d9916eabc9ac35d05b96 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 36.773 T 18-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CH53_1068 e8115f0f8920d9916eabc9ac35d05b96 317 Gene3D G3DSA:3.40.1010.20 98 197 9.4E-112 T 18-10-2018 CH53_1068 e8115f0f8920d9916eabc9ac35d05b96 317 Pfam PF02401 LytB protein 3 283 8.9E-93 T 18-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CH53_1068 e8115f0f8920d9916eabc9ac35d05b96 317 Gene3D G3DSA:3.40.50.11270 12 97 9.4E-112 T 18-10-2018 CH53_1068 e8115f0f8920d9916eabc9ac35d05b96 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 3.7E-99 T 18-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CH53_1068 e8115f0f8920d9916eabc9ac35d05b96 317 Gene3D G3DSA:3.40.1010.20 6 283 9.4E-112 T 18-10-2018 CH53_1287 7a7460b56dbf9c049c407ca74cad54ec 646 SUPERFAMILY SSF52540 142 391 1.45E-73 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1287 7a7460b56dbf9c049c407ca74cad54ec 646 SUPERFAMILY SSF140990 402 601 9.29E-73 T 18-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CH53_1287 7a7460b56dbf9c049c407ca74cad54ec 646 Gene3D G3DSA:3.40.50.300 141 320 1.4E-70 T 18-10-2018 CH53_1287 7a7460b56dbf9c049c407ca74cad54ec 646 SMART SM00382 184 323 1.9E-26 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1287 7a7460b56dbf9c049c407ca74cad54ec 646 Gene3D G3DSA:1.20.58.760 397 600 1.3E-69 T 18-10-2018 CH53_1287 7a7460b56dbf9c049c407ca74cad54ec 646 Gene3D G3DSA:2.40.50.920 24 100 1.1E-37 T 18-10-2018 CH53_1287 7a7460b56dbf9c049c407ca74cad54ec 646 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 1.2E-247 T 18-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CH53_1287 7a7460b56dbf9c049c407ca74cad54ec 646 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 607 37.409 T 18-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CH53_1287 7a7460b56dbf9c049c407ca74cad54ec 646 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 6.5E-46 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CH53_1287 7a7460b56dbf9c049c407ca74cad54ec 646 Pfam PF06480 FtsH Extracellular 5 93 3.6E-14 T 18-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 CH53_1287 7a7460b56dbf9c049c407ca74cad54ec 646 Pfam PF01434 Peptidase family M41 382 591 3.5E-82 T 18-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CH53_1287 7a7460b56dbf9c049c407ca74cad54ec 646 Gene3D G3DSA:1.10.8.60 322 396 3.5E-29 T 18-10-2018 CH53_1287 7a7460b56dbf9c049c407ca74cad54ec 646 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 18-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CH53_3362 db94c0bd5f8f85753209dcdd3d4401ee 91 SUPERFAMILY SSF143414 3 89 1.44E-32 T 18-10-2018 IPR037233 CcmK-like superfamily CH53_3362 db94c0bd5f8f85753209dcdd3d4401ee 91 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 47 1.0E-16 T 18-10-2018 CH53_3362 db94c0bd5f8f85753209dcdd3d4401ee 91 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 18-10-2018 IPR020808 Bacterial microcompartments protein, conserved site CH53_3362 db94c0bd5f8f85753209dcdd3d4401ee 91 SMART SM00877 3 79 4.6E-38 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_3362 db94c0bd5f8f85753209dcdd3d4401ee 91 Pfam PF00936 BMC domain 4 79 2.7E-29 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_3362 db94c0bd5f8f85753209dcdd3d4401ee 91 Gene3D G3DSA:3.30.70.1710 1 91 4.3E-41 T 18-10-2018 CH53_937 d91d1b6f285506437c71a2aaf29b5eb2 499 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 107 122 - T 18-10-2018 IPR031157 Tr-type G domain, conserved site CH53_937 d91d1b6f285506437c71a2aaf29b5eb2 499 Gene3D G3DSA:2.40.30.10 356 458 1.1E-28 T 18-10-2018 CH53_937 d91d1b6f285506437c71a2aaf29b5eb2 499 SUPERFAMILY SSF50447 266 352 5.74E-23 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CH53_937 d91d1b6f285506437c71a2aaf29b5eb2 499 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 58 239 1.5E-16 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CH53_937 d91d1b6f285506437c71a2aaf29b5eb2 499 Pfam PF00009 Elongation factor Tu GTP binding domain 50 255 1.3E-44 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_937 d91d1b6f285506437c71a2aaf29b5eb2 499 SUPERFAMILY SSF52540 45 259 1.2E-58 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_937 d91d1b6f285506437c71a2aaf29b5eb2 499 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 43 499 53.345 T 18-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CH53_937 d91d1b6f285506437c71a2aaf29b5eb2 499 PRINTS PR00315 GTP-binding elongation factor signature 150 161 1.0E-13 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_937 d91d1b6f285506437c71a2aaf29b5eb2 499 PRINTS PR00315 GTP-binding elongation factor signature 114 122 1.0E-13 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_937 d91d1b6f285506437c71a2aaf29b5eb2 499 PRINTS PR00315 GTP-binding elongation factor signature 187 196 1.0E-13 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_937 d91d1b6f285506437c71a2aaf29b5eb2 499 PRINTS PR00315 GTP-binding elongation factor signature 53 66 1.0E-13 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_937 d91d1b6f285506437c71a2aaf29b5eb2 499 PRINTS PR00315 GTP-binding elongation factor signature 134 144 1.0E-13 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_937 d91d1b6f285506437c71a2aaf29b5eb2 499 SUPERFAMILY SSF50465 359 459 8.15E-29 T 18-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CH53_937 d91d1b6f285506437c71a2aaf29b5eb2 499 Gene3D G3DSA:2.40.30.10 266 353 6.9E-25 T 18-10-2018 CH53_937 d91d1b6f285506437c71a2aaf29b5eb2 499 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 52 458 8.7E-205 T 18-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CH53_937 d91d1b6f285506437c71a2aaf29b5eb2 499 Gene3D G3DSA:3.40.50.300 30 264 1.5E-72 T 18-10-2018 CH53_1005 9c2c02a3ac7d1bc94f2c5939bef4250c 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 192 27.271 T 18-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CH53_1005 9c2c02a3ac7d1bc94f2c5939bef4250c 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 189 3.1E-60 T 18-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CH53_1005 9c2c02a3ac7d1bc94f2c5939bef4250c 206 SUPERFAMILY SSF52540 1 192 8.04E-43 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1005 9c2c02a3ac7d1bc94f2c5939bef4250c 206 Gene3D G3DSA:3.40.50.300 1 205 3.0E-66 T 18-10-2018 CH53_1005 9c2c02a3ac7d1bc94f2c5939bef4250c 206 Pfam PF01121 Dephospho-CoA kinase 3 177 1.5E-69 T 18-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CH53_1014 fe46aa74b1be92432285782c6bf33bd4 418 SMART SM00842 10 196 1.3E-96 T 18-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 CH53_1014 fe46aa74b1be92432285782c6bf33bd4 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.1E-161 T 18-10-2018 IPR020823 Cell division protein FtsA CH53_1014 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.90.640.10 235 300 1.9E-115 T 18-10-2018 CH53_1014 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 197 359 1.9E-115 T 18-10-2018 CH53_1014 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.1490.110 87 169 1.9E-115 T 18-10-2018 CH53_1014 fe46aa74b1be92432285782c6bf33bd4 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 3.5E-30 T 18-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 CH53_1014 fe46aa74b1be92432285782c6bf33bd4 418 SUPERFAMILY SSF53067 198 384 2.13E-47 T 18-10-2018 CH53_1014 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 13 379 1.9E-115 T 18-10-2018 CH53_1014 fe46aa74b1be92432285782c6bf33bd4 418 SUPERFAMILY SSF53067 8 221 7.12E-62 T 18-10-2018 CH53_1014 fe46aa74b1be92432285782c6bf33bd4 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.689 T 18-10-2018 IPR020823 Cell division protein FtsA CH53_1014 fe46aa74b1be92432285782c6bf33bd4 418 Pfam PF14450 Cell division protein FtsA 207 381 1.2E-24 T 18-10-2018 CH53_1014 fe46aa74b1be92432285782c6bf33bd4 418 PIRSF PIRSF003101 1 418 1.2E-153 T 18-10-2018 IPR020823 Cell division protein FtsA CH53_154 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 445 528 1.8E-20 T 18-10-2018 CH53_154 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 255 371 8.24E-30 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_154 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 6 97 3.1E-17 T 18-10-2018 CH53_154 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 98 181 4.6E-7 T 18-10-2018 CH53_154 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 358 444 1.6E-22 T 18-10-2018 CH53_154 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 269 357 1.2E-29 T 18-10-2018 CH53_154 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 1 112 4.91E-19 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_154 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 189 275 7.46E-27 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_154 4570ae43d49be061c1037362266f69ae 557 PIRSF PIRSF002111 1 534 2.5E-217 T 18-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CH53_154 4570ae43d49be061c1037362266f69ae 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.3E-236 T 18-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CH53_154 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 363 444 4.77E-20 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_154 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 275 347 6.5E-26 T 18-10-2018 IPR022967 RNA-binding domain, S1 CH53_154 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 19 87 5.0E-5 T 18-10-2018 IPR022967 RNA-binding domain, S1 CH53_154 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 362 434 1.8E-20 T 18-10-2018 IPR022967 RNA-binding domain, S1 CH53_154 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 103 171 8.1E-9 T 18-10-2018 IPR022967 RNA-binding domain, S1 CH53_154 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 449 520 2.0E-21 T 18-10-2018 IPR022967 RNA-binding domain, S1 CH53_154 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 190 260 2.8E-28 T 18-10-2018 IPR022967 RNA-binding domain, S1 CH53_154 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 20 78 6.7E-7 T 18-10-2018 IPR003029 S1 domain GO:0003676 CH53_154 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 279 347 2.8E-19 T 18-10-2018 IPR003029 S1 domain GO:0003676 CH53_154 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 18-10-2018 IPR003029 S1 domain GO:0003676 CH53_154 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 449 520 4.3E-16 T 18-10-2018 IPR003029 S1 domain GO:0003676 CH53_154 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 103 171 6.9E-10 T 18-10-2018 IPR003029 S1 domain GO:0003676 CH53_154 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 361 434 3.3E-21 T 18-10-2018 IPR003029 S1 domain GO:0003676 CH53_154 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 104 185 4.25E-14 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_154 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 429 535 4.62E-22 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_154 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 6.7E-99 T 18-10-2018 CH53_154 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 6.7E-99 T 18-10-2018 CH53_154 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 6.7E-99 T 18-10-2018 CH53_154 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 6.7E-99 T 18-10-2018 CH53_154 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 6.7E-99 T 18-10-2018 CH53_154 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 6.7E-99 T 18-10-2018 CH53_154 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 6.7E-99 T 18-10-2018 CH53_154 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 6.7E-99 T 18-10-2018 CH53_154 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 6.7E-99 T 18-10-2018 CH53_154 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 187 268 1.1E-27 T 18-10-2018 CH53_524 f6d2ac693c972480e73b7e1442d705d6 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 3.0E-143 T 18-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CH53_524 f6d2ac693c972480e73b7e1442d705d6 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 8.2E-136 T 18-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CH53_524 f6d2ac693c972480e73b7e1442d705d6 322 Gene3D G3DSA:3.40.50.1100 12 306 2.8E-125 T 18-10-2018 CH53_524 f6d2ac693c972480e73b7e1442d705d6 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 18-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CH53_524 f6d2ac693c972480e73b7e1442d705d6 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 4.6E-69 T 18-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CH53_524 f6d2ac693c972480e73b7e1442d705d6 322 SUPERFAMILY SSF53686 3 316 7.46E-98 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH53_524 f6d2ac693c972480e73b7e1442d705d6 322 Gene3D G3DSA:3.40.50.1100 43 145 2.8E-125 T 18-10-2018 CH53_1944 9f630e4ed7670293043e6100ee635d5a 496 Pfam PF00005 ABC transporter 272 425 2.9E-21 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1944 9f630e4ed7670293043e6100ee635d5a 496 Pfam PF00005 ABC transporter 20 169 5.0E-28 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1944 9f630e4ed7670293043e6100ee635d5a 496 Gene3D G3DSA:3.40.50.300 260 494 4.1E-47 T 18-10-2018 CH53_1944 9f630e4ed7670293043e6100ee635d5a 496 SUPERFAMILY SSF52540 3 227 1.28E-58 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1944 9f630e4ed7670293043e6100ee635d5a 496 Gene3D G3DSA:3.40.50.300 1 237 7.2E-57 T 18-10-2018 CH53_1944 9f630e4ed7670293043e6100ee635d5a 496 SMART SM00382 280 474 0.0015 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1944 9f630e4ed7670293043e6100ee635d5a 496 SMART SM00382 29 217 2.6E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1944 9f630e4ed7670293043e6100ee635d5a 496 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1944 9f630e4ed7670293043e6100ee635d5a 496 SUPERFAMILY SSF52540 263 484 2.48E-48 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3545 77356be66ae76ed3daf8035eb0c8ff57 692 Gene3D G3DSA:1.10.8.540 505 593 1.7E-29 T 18-10-2018 CH53_3545 77356be66ae76ed3daf8035eb0c8ff57 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 689 2.2E-278 T 18-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 CH53_3545 77356be66ae76ed3daf8035eb0c8ff57 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 18-10-2018 IPR025505 FHIPEP conserved site CH53_3545 77356be66ae76ed3daf8035eb0c8ff57 692 Gene3D G3DSA:1.10.490.80 596 689 1.2E-7 T 18-10-2018 CH53_3545 77356be66ae76ed3daf8035eb0c8ff57 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 1.5E-56 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_3545 77356be66ae76ed3daf8035eb0c8ff57 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 1.5E-56 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_3545 77356be66ae76ed3daf8035eb0c8ff57 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 1.5E-56 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_3545 77356be66ae76ed3daf8035eb0c8ff57 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 1.5E-56 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_3545 77356be66ae76ed3daf8035eb0c8ff57 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 1.5E-56 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_3545 77356be66ae76ed3daf8035eb0c8ff57 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 1.5E-56 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_3545 77356be66ae76ed3daf8035eb0c8ff57 692 Gene3D G3DSA:3.40.30.60 361 504 2.0E-51 T 18-10-2018 CH53_3545 77356be66ae76ed3daf8035eb0c8ff57 692 PIRSF PIRSF005419 15 692 9.1E-240 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_3545 77356be66ae76ed3daf8035eb0c8ff57 692 Pfam PF00771 FHIPEP family 31 681 1.2E-266 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_10 7f3eaee928b008b8c80fd81346c2a94d 55 Pfam PF01783 Ribosomal L32p protein family 2 54 1.1E-19 T 18-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_10 7f3eaee928b008b8c80fd81346c2a94d 55 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.225 T 18-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_10 7f3eaee928b008b8c80fd81346c2a94d 55 SUPERFAMILY SSF57829 2 54 1.04E-18 T 18-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CH53_10 7f3eaee928b008b8c80fd81346c2a94d 55 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 3.5E-20 T 18-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1698 9ae0cad40d3ae1cb9f3e68726f8384a4 155 Pfam PF13673 Acetyltransferase (GNAT) domain 61 132 2.2E-12 T 18-10-2018 IPR000182 GNAT domain CH53_1698 9ae0cad40d3ae1cb9f3e68726f8384a4 155 Gene3D G3DSA:3.40.630.30 1 147 2.6E-31 T 18-10-2018 CH53_1698 9ae0cad40d3ae1cb9f3e68726f8384a4 155 SUPERFAMILY SSF55729 1 147 5.58E-23 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_3099 95603f4e7b8ff808176b9b4aa188e227 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 549 53.572 T 18-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 CH53_3099 95603f4e7b8ff808176b9b4aa188e227 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CH53_3099 95603f4e7b8ff808176b9b4aa188e227 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CH53_3099 95603f4e7b8ff808176b9b4aa188e227 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CH53_3099 95603f4e7b8ff808176b9b4aa188e227 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CH53_3099 95603f4e7b8ff808176b9b4aa188e227 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3099 95603f4e7b8ff808176b9b4aa188e227 555 Gene3D G3DSA:2.40.240.10 348 462 1.7E-46 T 18-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CH53_3099 95603f4e7b8ff808176b9b4aa188e227 555 Gene3D G3DSA:1.10.1160.10 261 339 8.1E-35 T 18-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 CH53_3099 95603f4e7b8ff808176b9b4aa188e227 555 Gene3D G3DSA:3.90.800.10 101 209 8.1E-107 T 18-10-2018 CH53_3099 95603f4e7b8ff808176b9b4aa188e227 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 3.8E-126 T 18-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 CH53_3099 95603f4e7b8ff808176b9b4aa188e227 555 Gene3D G3DSA:3.40.50.620 30 247 8.1E-107 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_3099 95603f4e7b8ff808176b9b4aa188e227 555 SUPERFAMILY SSF50715 340 547 9.42E-79 T 18-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CH53_3099 95603f4e7b8ff808176b9b4aa188e227 555 Gene3D G3DSA:2.40.240.10 463 547 3.6E-33 T 18-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CH53_3099 95603f4e7b8ff808176b9b4aa188e227 555 SUPERFAMILY SSF52374 11 337 1.27E-100 T 18-10-2018 CH53_3099 95603f4e7b8ff808176b9b4aa188e227 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 550 3.7E-301 T 18-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CH53_3099 95603f4e7b8ff808176b9b4aa188e227 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 528 1.7E-61 T 18-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 371 439 1.0E-32 T 18-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 SMART SM00382 159 361 6.3E-7 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 SMART SM00760 370 439 6.1E-45 T 18-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 Pfam PF11638 DnaA N-terminal domain 4 64 2.7E-20 T 18-10-2018 IPR024633 DnaA N-terminal domain CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 SUPERFAMILY SSF52540 127 338 7.92E-45 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 Gene3D G3DSA:1.10.8.60 293 363 1.1E-23 T 18-10-2018 CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 SUPERFAMILY SSF48295 358 461 3.4E-38 T 18-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 ProSitePatterns PS01008 DnaA protein signature. 420 439 - T 18-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 461 34.443 T 18-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 Pfam PF00308 Bacterial dnaA protein 128 344 5.7E-99 T 18-10-2018 IPR013317 Chromosomal replication initiator protein DnaA CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 Gene3D G3DSA:3.40.50.300 114 291 3.2E-51 T 18-10-2018 CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 Gene3D G3DSA:1.10.1750.10 369 462 7.2E-40 T 18-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 258 285 1.2E-54 T 18-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 192 206 1.2E-54 T 18-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 420 439 1.2E-54 T 18-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 224 238 1.2E-54 T 18-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 160 180 1.2E-54 T 18-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 Gene3D G3DSA:3.30.300.180 2 108 2.6E-40 T 18-10-2018 IPR038454 DnaA, N-terminal domain superfamily CH53_1731 0c6ca1ca2b17e4b9db68dd563c7014e5 462 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 460 4.0E-186 T 18-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CH53_3411 3b1d6311d9d74708f8ad6be4799c27e6 575 Pfam PF00691 OmpA family 445 540 2.9E-15 T 18-10-2018 IPR006665 OmpA-like domain CH53_3411 3b1d6311d9d74708f8ad6be4799c27e6 575 SUPERFAMILY SSF103088 416 545 2.62E-31 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_3411 3b1d6311d9d74708f8ad6be4799c27e6 575 Gene3D G3DSA:3.30.1330.60 427 554 3.5E-31 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_3411 3b1d6311d9d74708f8ad6be4799c27e6 575 PRINTS PR01021 OMPA domain signature 490 506 3.0E-5 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CH53_3411 3b1d6311d9d74708f8ad6be4799c27e6 575 PRINTS PR01021 OMPA domain signature 475 490 3.0E-5 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CH53_3542 740d5331adecea7c1390a5b69c782b61 129 Gene3D G3DSA:3.40.50.2300 2 129 1.0E-38 T 18-10-2018 CH53_3542 740d5331adecea7c1390a5b69c782b61 129 Pfam PF00072 Response regulator receiver domain 9 120 4.5E-32 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3542 740d5331adecea7c1390a5b69c782b61 129 SUPERFAMILY SSF52172 5 125 1.14E-36 T 18-10-2018 IPR011006 CheY-like superfamily CH53_3542 740d5331adecea7c1390a5b69c782b61 129 SMART SM00448 6 120 5.2E-35 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_2504 67cadea62c514b16f32d2bbf8db76243 216 Gene3D G3DSA:3.40.630.30 1 211 2.7E-54 T 18-10-2018 CH53_2504 67cadea62c514b16f32d2bbf8db76243 216 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 48 - T 18-10-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_2504 67cadea62c514b16f32d2bbf8db76243 216 Pfam PF00765 Autoinducer synthase 13 187 2.1E-67 T 18-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_2504 67cadea62c514b16f32d2bbf8db76243 216 SUPERFAMILY SSF55729 1 210 9.8E-46 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_2504 67cadea62c514b16f32d2bbf8db76243 216 PRINTS PR01549 Autoinducer synthesis protein signature 141 162 7.1E-62 T 18-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_2504 67cadea62c514b16f32d2bbf8db76243 216 PRINTS PR01549 Autoinducer synthesis protein signature 62 80 7.1E-62 T 18-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_2504 67cadea62c514b16f32d2bbf8db76243 216 PRINTS PR01549 Autoinducer synthesis protein signature 39 61 7.1E-62 T 18-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_2504 67cadea62c514b16f32d2bbf8db76243 216 PRINTS PR01549 Autoinducer synthesis protein signature 94 106 7.1E-62 T 18-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_2504 67cadea62c514b16f32d2bbf8db76243 216 PRINTS PR01549 Autoinducer synthesis protein signature 163 180 7.1E-62 T 18-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_2504 67cadea62c514b16f32d2bbf8db76243 216 PRINTS PR01549 Autoinducer synthesis protein signature 119 140 7.1E-62 T 18-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_2504 67cadea62c514b16f32d2bbf8db76243 216 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 7.1E-62 T 18-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CH53_1126 d21637df892bfdd6a1991a3679bee8dc 145 SUPERFAMILY SSF102220 27 135 1.05E-34 T 18-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1126 d21637df892bfdd6a1991a3679bee8dc 145 Gene3D G3DSA:3.40.50.10220 33 137 2.3E-37 T 18-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1126 d21637df892bfdd6a1991a3679bee8dc 145 Pfam PF03603 DNA polymerase III psi subunit 3 127 5.9E-47 T 18-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1126 d21637df892bfdd6a1991a3679bee8dc 145 PIRSF PIRSF029225 2 131 2.1E-51 T 18-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1126 d21637df892bfdd6a1991a3679bee8dc 145 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 3.0E-40 T 18-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_3927 82c86ca41a75f5e585415178b5a7cd36 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 643 3.5E-220 T 18-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CH53_3927 82c86ca41a75f5e585415178b5a7cd36 644 Pfam PF08206 Ribonuclease B OB domain 24 80 5.9E-19 T 18-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain CH53_3927 82c86ca41a75f5e585415178b5a7cd36 644 SUPERFAMILY SSF50249 560 642 1.24E-20 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_3927 82c86ca41a75f5e585415178b5a7cd36 644 SUPERFAMILY SSF50249 8 80 1.64E-15 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_3927 82c86ca41a75f5e585415178b5a7cd36 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 44.877 T 18-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 CH53_3927 82c86ca41a75f5e585415178b5a7cd36 644 SMART SM00357 23 79 1.5E-12 T 18-10-2018 IPR011129 Cold shock domain GO:0003676 CH53_3927 82c86ca41a75f5e585415178b5a7cd36 644 Pfam PF00773 RNB domain 189 516 4.7E-86 T 18-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CH53_3927 82c86ca41a75f5e585415178b5a7cd36 644 Gene3D G3DSA:2.40.50.140 558 644 6.6E-35 T 18-10-2018 CH53_3927 82c86ca41a75f5e585415178b5a7cd36 644 SUPERFAMILY SSF50249 174 556 6.28E-116 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_3927 82c86ca41a75f5e585415178b5a7cd36 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 18-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 CH53_3927 82c86ca41a75f5e585415178b5a7cd36 644 Pfam PF00575 S1 RNA binding domain 560 638 3.5E-10 T 18-10-2018 IPR003029 S1 domain GO:0003676 CH53_3927 82c86ca41a75f5e585415178b5a7cd36 644 SMART SM00955 189 517 2.8E-123 T 18-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CH53_3927 82c86ca41a75f5e585415178b5a7cd36 644 SUPERFAMILY SSF50249 83 171 2.23E-30 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_3927 82c86ca41a75f5e585415178b5a7cd36 644 Gene3D G3DSA:2.40.50.140 1 82 1.7E-30 T 18-10-2018 CH53_3927 82c86ca41a75f5e585415178b5a7cd36 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 18-10-2018 IPR022966 Ribonuclease II/R, conserved site CH53_3927 82c86ca41a75f5e585415178b5a7cd36 644 Gene3D G3DSA:2.40.50.640 83 155 1.5E-29 T 18-10-2018 CH53_1138 b2027cfc12adcc5ff9cbbc22914c087d 469 SMART SM00640 31 432 8.5E-134 T 18-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 CH53_1138 b2027cfc12adcc5ff9cbbc22914c087d 469 Gene3D G3DSA:2.60.120.560 379 463 1.2E-8 T 18-10-2018 CH53_1138 b2027cfc12adcc5ff9cbbc22914c087d 469 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 414 455 1.2E-8 T 18-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal CH53_1138 b2027cfc12adcc5ff9cbbc22914c087d 469 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 17 442 2.0E-157 T 18-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 CH53_1138 b2027cfc12adcc5ff9cbbc22914c087d 469 SUPERFAMILY SSF49899 338 465 7.68E-18 T 18-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CH53_1138 b2027cfc12adcc5ff9cbbc22914c087d 469 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 31 336 5.1E-101 T 18-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal CH53_1138 b2027cfc12adcc5ff9cbbc22914c087d 469 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 31 44 - T 18-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 CH53_1138 b2027cfc12adcc5ff9cbbc22914c087d 469 Gene3D G3DSA:2.115.10.20 5 352 9.6E-111 T 18-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CH53_1138 b2027cfc12adcc5ff9cbbc22914c087d 469 SUPERFAMILY SSF75005 22 336 4.24E-106 T 18-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CH53_736 6b216f5b063b6740ddd9f8d7c147c1b2 525 Gene3D G3DSA:3.10.105.10 250 496 4.6E-180 T 18-10-2018 CH53_736 6b216f5b063b6740ddd9f8d7c147c1b2 525 Gene3D G3DSA:3.40.190.10 42 508 4.6E-180 T 18-10-2018 CH53_736 6b216f5b063b6740ddd9f8d7c147c1b2 525 SUPERFAMILY SSF53850 29 505 1.01E-96 T 18-10-2018 CH53_736 6b216f5b063b6740ddd9f8d7c147c1b2 525 PIRSF PIRSF002741 30 515 2.7E-74 T 18-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CH53_736 6b216f5b063b6740ddd9f8d7c147c1b2 525 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 427 2.3E-81 T 18-10-2018 IPR000914 Solute-binding protein family 5 domain CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Gene3D G3DSA:2.40.160.160 184 428 3.5E-112 T 18-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SUPERFAMILY SSF49373 935 1028 6.87E-22 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SUPERFAMILY SSF49373 531 624 1.67E-21 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SUPERFAMILY SSF49373 1846 1938 1.02E-21 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SUPERFAMILY SSF49373 1339 1432 6.08E-22 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SUPERFAMILY SSF49373 632 725 6.87E-22 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SUPERFAMILY SSF49373 1543 1636 9.22E-22 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SUPERFAMILY SSF49373 1947 2027 1.1E-10 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SUPERFAMILY SSF49373 1745 1838 6.87E-22 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 PRINTS PR01369 Intimin signature 273 288 5.0E-10 T 18-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 PRINTS PR01369 Intimin signature 301 320 5.0E-10 T 18-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 PRINTS PR01369 Intimin signature 369 388 5.0E-10 T 18-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SUPERFAMILY SSF49373 733 826 9.22E-22 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Gene3D G3DSA:2.60.40.1080 1945 2035 7.7E-18 T 18-10-2018 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SUPERFAMILY SSF49373 1137 1230 6.87E-22 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SMART SM00634 534 621 1.7E-7 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SMART SM00634 736 823 5.9E-9 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SMART SM00634 1241 1328 2.4E-8 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SMART SM00634 1443 1530 2.4E-8 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SMART SM00634 635 722 2.4E-8 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SMART SM00634 837 924 2.4E-8 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SMART SM00634 1140 1227 2.4E-8 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SMART SM00634 938 1025 2.4E-8 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SMART SM00634 1647 1734 2.4E-8 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SMART SM00634 1546 1633 5.9E-9 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SMART SM00634 1748 1835 2.4E-8 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SMART SM00634 1849 1936 5.9E-9 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SMART SM00634 1342 1430 3.6E-7 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SMART SM00634 1039 1126 1.2E-7 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Pfam PF11924 Inverse autotransporter, beta-domain 155 421 3.4E-115 T 18-10-2018 IPR024519 Inverse autotransporter, beta-domain CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SUPERFAMILY SSF49373 1644 1737 6.87E-22 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SUPERFAMILY SSF49373 1238 1331 6.87E-22 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SUPERFAMILY SSF49373 1036 1129 1.9E-21 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SUPERFAMILY SSF49373 834 927 6.87E-22 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Pfam PF09134 Invasin, domain 3 1442 1534 9.5E-22 T 18-10-2018 IPR015217 Invasin, domain 3 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Pfam PF09134 Invasin, domain 3 836 929 2.4E-22 T 18-10-2018 IPR015217 Invasin, domain 3 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Pfam PF09134 Invasin, domain 3 634 727 2.4E-22 T 18-10-2018 IPR015217 Invasin, domain 3 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Pfam PF09134 Invasin, domain 3 937 1030 2.4E-22 T 18-10-2018 IPR015217 Invasin, domain 3 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Pfam PF09134 Invasin, domain 3 1038 1131 9.6E-22 T 18-10-2018 IPR015217 Invasin, domain 3 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Pfam PF09134 Invasin, domain 3 1240 1333 2.4E-22 T 18-10-2018 IPR015217 Invasin, domain 3 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Pfam PF09134 Invasin, domain 3 1848 1942 5.3E-22 T 18-10-2018 IPR015217 Invasin, domain 3 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Pfam PF09134 Invasin, domain 3 1646 1739 2.4E-22 T 18-10-2018 IPR015217 Invasin, domain 3 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Pfam PF09134 Invasin, domain 3 1747 1840 2.4E-22 T 18-10-2018 IPR015217 Invasin, domain 3 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Pfam PF09134 Invasin, domain 3 735 828 6.9E-22 T 18-10-2018 IPR015217 Invasin, domain 3 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Pfam PF09134 Invasin, domain 3 532 625 1.7E-18 T 18-10-2018 IPR015217 Invasin, domain 3 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Pfam PF09134 Invasin, domain 3 1139 1232 2.4E-22 T 18-10-2018 IPR015217 Invasin, domain 3 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Pfam PF09134 Invasin, domain 3 1545 1638 6.9E-22 T 18-10-2018 IPR015217 Invasin, domain 3 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Pfam PF09134 Invasin, domain 3 1341 1434 3.1E-22 T 18-10-2018 IPR015217 Invasin, domain 3 CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 SUPERFAMILY SSF49373 1440 1529 1.53E-21 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Gene3D G3DSA:2.60.40.10 1542 1637 4.6E-24 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Gene3D G3DSA:2.60.40.10 1338 1433 5.1E-24 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Gene3D G3DSA:2.60.40.10 1643 1738 7.4E-24 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Gene3D G3DSA:2.60.40.10 1035 1130 3.4E-23 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Gene3D G3DSA:2.60.40.10 1237 1332 7.4E-24 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Gene3D G3DSA:2.60.40.10 1136 1231 7.4E-24 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Gene3D G3DSA:2.60.40.10 934 1029 7.4E-24 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Gene3D G3DSA:2.60.40.10 529 624 4.0E-21 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Gene3D G3DSA:2.60.40.10 833 928 7.4E-24 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Gene3D G3DSA:2.60.40.10 631 726 7.4E-24 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Gene3D G3DSA:2.60.40.10 732 827 4.6E-24 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Gene3D G3DSA:2.60.40.10 1845 1940 4.8E-24 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Gene3D G3DSA:2.60.40.10 1439 1534 5.0E-23 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2322 cd0d0f1ec685dced51385e0f7806e093 2146 Gene3D G3DSA:2.60.40.10 1744 1839 7.4E-24 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_3258 86b6e45b111cd176fd7a80da52eea58f 436 Gene3D G3DSA:3.20.20.70 73 435 2.0E-78 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3258 86b6e45b111cd176fd7a80da52eea58f 436 Pfam PF04055 Radical SAM superfamily 80 245 2.1E-9 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_3258 86b6e45b111cd176fd7a80da52eea58f 436 SUPERFAMILY SSF102114 75 400 1.02E-33 T 18-10-2018 CH53_3258 86b6e45b111cd176fd7a80da52eea58f 436 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 328 418 1.8E-11 T 18-10-2018 IPR023885 4Fe4S-binding SPASM domain CH53_2670 82ff0898b9e2ef75b7c5e4b7afab87cb 557 Pfam PF02203 Tar ligand binding domain homologue 27 194 4.2E-33 T 18-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CH53_2670 82ff0898b9e2ef75b7c5e4b7afab87cb 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 351 506 5.4E-41 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_2670 82ff0898b9e2ef75b7c5e4b7afab87cb 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 82 97 2.7E-50 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_2670 82ff0898b9e2ef75b7c5e4b7afab87cb 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 466 495 2.7E-50 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_2670 82ff0898b9e2ef75b7c5e4b7afab87cb 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 2.7E-50 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_2670 82ff0898b9e2ef75b7c5e4b7afab87cb 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 416 2.7E-50 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_2670 82ff0898b9e2ef75b7c5e4b7afab87cb 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 27 52 2.7E-50 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_2670 82ff0898b9e2ef75b7c5e4b7afab87cb 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 211 231 2.7E-50 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_2670 82ff0898b9e2ef75b7c5e4b7afab87cb 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 312 341 2.7E-50 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_2670 82ff0898b9e2ef75b7c5e4b7afab87cb 557 SMART SM00283 291 538 7.1E-62 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_2670 82ff0898b9e2ef75b7c5e4b7afab87cb 557 SUPERFAMILY SSF58104 266 539 1.1E-55 T 18-10-2018 CH53_2670 82ff0898b9e2ef75b7c5e4b7afab87cb 557 SMART SM00304 236 290 1.8E-6 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_2670 82ff0898b9e2ef75b7c5e4b7afab87cb 557 Gene3D G3DSA:1.20.120.30 44 210 8.1E-41 T 18-10-2018 CH53_2670 82ff0898b9e2ef75b7c5e4b7afab87cb 557 SMART SM00319 66 200 9.2E-4 T 18-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CH53_2670 82ff0898b9e2ef75b7c5e4b7afab87cb 557 Gene3D G3DSA:1.10.287.950 236 539 1.4E-72 T 18-10-2018 CH53_2670 82ff0898b9e2ef75b7c5e4b7afab87cb 557 SUPERFAMILY SSF47170 47 196 6.54E-40 T 18-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CH53_2405 6d4da6205e048a4d6a3b15c6ccf8a06f 371 SUPERFAMILY SSF56770 40 297 8.41E-85 T 18-10-2018 CH53_2405 6d4da6205e048a4d6a3b15c6ccf8a06f 371 Gene3D G3DSA:3.40.50.700 38 216 5.8E-69 T 18-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily CH53_2405 6d4da6205e048a4d6a3b15c6ccf8a06f 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 150 174 1.5E-67 T 18-10-2018 CH53_2405 6d4da6205e048a4d6a3b15c6ccf8a06f 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 61 85 1.5E-67 T 18-10-2018 CH53_2405 6d4da6205e048a4d6a3b15c6ccf8a06f 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 107 130 1.5E-67 T 18-10-2018 CH53_2405 6d4da6205e048a4d6a3b15c6ccf8a06f 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 223 241 1.5E-67 T 18-10-2018 CH53_2405 6d4da6205e048a4d6a3b15c6ccf8a06f 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 38 60 1.5E-67 T 18-10-2018 CH53_2405 6d4da6205e048a4d6a3b15c6ccf8a06f 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 247 273 1.5E-67 T 18-10-2018 CH53_2405 6d4da6205e048a4d6a3b15c6ccf8a06f 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 205 222 1.5E-67 T 18-10-2018 CH53_2405 6d4da6205e048a4d6a3b15c6ccf8a06f 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 179 202 1.5E-67 T 18-10-2018 CH53_2405 6d4da6205e048a4d6a3b15c6ccf8a06f 371 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 53 198 1.4E-33 T 18-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_2405 6d4da6205e048a4d6a3b15c6ccf8a06f 371 PIRSF PIRSF000310 1 362 9.6E-135 T 18-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CH53_2405 6d4da6205e048a4d6a3b15c6ccf8a06f 371 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 218 299 1.1E-26 T 18-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CH53_2405 6d4da6205e048a4d6a3b15c6ccf8a06f 371 Gene3D G3DSA:4.10.480.10 218 309 7.6E-31 T 18-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily CH53_2405 6d4da6205e048a4d6a3b15c6ccf8a06f 371 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 4 359 7.5E-173 T 18-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CH53_2405 6d4da6205e048a4d6a3b15c6ccf8a06f 371 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 31 3.8E-6 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CH53_3593 ff7bf9abe774f0237fd6cee2c4fcfc28 330 Gene3D G3DSA:3.40.50.1100 19 324 6.1E-123 T 18-10-2018 CH53_3593 ff7bf9abe774f0237fd6cee2c4fcfc28 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 318 1.2E-52 T 18-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CH53_3593 ff7bf9abe774f0237fd6cee2c4fcfc28 330 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 2 330 63.845 T 18-10-2018 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 CH53_3593 ff7bf9abe774f0237fd6cee2c4fcfc28 330 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 13 330 1.4E-127 T 18-10-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 CH53_3593 ff7bf9abe774f0237fd6cee2c4fcfc28 330 SUPERFAMILY SSF53686 8 329 4.06E-87 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH53_3593 ff7bf9abe774f0237fd6cee2c4fcfc28 330 PIRSF PIRSF006278 1 330 1.4E-96 T 18-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CH53_3593 ff7bf9abe774f0237fd6cee2c4fcfc28 330 Gene3D G3DSA:3.40.50.1100 51 159 6.1E-123 T 18-10-2018 CH53_4111 f2521ce24276d7e66fbcc9c08e0466ae 140 Gene3D G3DSA:3.90.1010.10 1 138 2.0E-51 T 18-10-2018 CH53_4111 f2521ce24276d7e66fbcc9c08e0466ae 140 SUPERFAMILY SSF82649 4 135 1.94E-45 T 18-10-2018 CH53_4111 f2521ce24276d7e66fbcc9c08e0466ae 140 Pfam PF02657 Fe-S metabolism associated domain 12 132 2.6E-43 T 18-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like CH53_4111 f2521ce24276d7e66fbcc9c08e0466ae 140 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 42.898 T 18-10-2018 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 CH53_2973 99e539b6a18dee031c9225c0a24e68df 121 Gene3D G3DSA:2.40.160.20 1 121 2.9E-22 T 18-10-2018 CH53_2973 99e539b6a18dee031c9225c0a24e68df 121 SUPERFAMILY SSF56925 2 121 2.33E-18 T 18-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CH53_2973 99e539b6a18dee031c9225c0a24e68df 121 Pfam PF13505 Outer membrane protein beta-barrel domain 2 121 3.8E-8 T 18-10-2018 IPR027385 Outer membrane protein beta-barrel CH53_1708 dce5e1d08d6d51f95545a17cb6e7542b 157 SUPERFAMILY SSF49764 30 134 1.29E-19 T 18-10-2018 IPR008978 HSP20-like chaperone CH53_1708 dce5e1d08d6d51f95545a17cb6e7542b 157 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 147 47.356 T 18-10-2018 IPR022848 Small heat shock protein IbpB CH53_1708 dce5e1d08d6d51f95545a17cb6e7542b 157 Gene3D G3DSA:2.60.40.790 32 135 3.9E-21 T 18-10-2018 IPR008978 HSP20-like chaperone CH53_1708 dce5e1d08d6d51f95545a17cb6e7542b 157 Pfam PF00011 Hsp20/alpha crystallin family 39 134 2.4E-16 T 18-10-2018 IPR002068 Alpha crystallin/Hsp20 domain CH53_3044 78aa497dbb283c95d1d23d7ab8fd8434 85 Hamap MF_00827 UPF0386 protein YjhX [yjhX]. 1 85 28.786 T 18-10-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair CH53_3044 78aa497dbb283c95d1d23d7ab8fd8434 85 Pfam PF09857 Putative toxin of bacterial toxin-antitoxin pair 1 85 8.5E-41 T 18-10-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair CH53_3464 438b9d41c427de77e2cdae0b05836ecd 479 SMART SM00387 359 466 4.1E-34 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3464 438b9d41c427de77e2cdae0b05836ecd 479 SUPERFAMILY SSF55874 307 464 5.89E-41 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3464 438b9d41c427de77e2cdae0b05836ecd 479 Gene3D G3DSA:1.10.287.130 237 315 2.6E-18 T 18-10-2018 CH53_3464 438b9d41c427de77e2cdae0b05836ecd 479 SUPERFAMILY SSF47384 244 314 8.04E-14 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_3464 438b9d41c427de77e2cdae0b05836ecd 479 SUPERFAMILY SSF103190 37 139 3.92E-13 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CH53_3464 438b9d41c427de77e2cdae0b05836ecd 479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 464 1.5E-23 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3464 438b9d41c427de77e2cdae0b05836ecd 479 SMART SM00388 251 317 2.3E-15 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_3464 438b9d41c427de77e2cdae0b05836ecd 479 Gene3D G3DSA:3.30.565.10 317 472 9.3E-46 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3464 438b9d41c427de77e2cdae0b05836ecd 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 9.9E-19 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3464 438b9d41c427de77e2cdae0b05836ecd 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 463 9.9E-19 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3464 438b9d41c427de77e2cdae0b05836ecd 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 9.9E-19 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3464 438b9d41c427de77e2cdae0b05836ecd 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 444 9.9E-19 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3464 438b9d41c427de77e2cdae0b05836ecd 479 Pfam PF00512 His Kinase A (phospho-acceptor) domain 252 313 1.6E-13 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_6 37f434b537eabe1908b497cd21213a2a 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 7.5E-6 T 18-10-2018 CH53_6 37f434b537eabe1908b497cd21213a2a 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 4.1E-99 T 18-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CH53_6 37f434b537eabe1908b497cd21213a2a 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 7.5E-65 T 18-10-2018 CH53_6 37f434b537eabe1908b497cd21213a2a 244 Gene3D G3DSA:3.40.50.720 1 244 3.5E-84 T 18-10-2018 CH53_6 37f434b537eabe1908b497cd21213a2a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 7.9E-50 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_6 37f434b537eabe1908b497cd21213a2a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 7.9E-50 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_6 37f434b537eabe1908b497cd21213a2a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 7.9E-50 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_6 37f434b537eabe1908b497cd21213a2a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 7.9E-50 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_6 37f434b537eabe1908b497cd21213a2a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.9E-50 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_6 37f434b537eabe1908b497cd21213a2a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 7.9E-50 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_6 37f434b537eabe1908b497cd21213a2a 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CH53_6 37f434b537eabe1908b497cd21213a2a 244 SUPERFAMILY SSF51735 4 243 4.65E-85 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_6 37f434b537eabe1908b497cd21213a2a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.2E-15 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_6 37f434b537eabe1908b497cd21213a2a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.2E-15 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_6 37f434b537eabe1908b497cd21213a2a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.2E-15 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_1405 dd845d09fdf5a8efb2a1cb6bd8fc0d4c 809 Gene3D G3DSA:3.30.70.100 712 800 5.0E-8 T 18-10-2018 CH53_1405 dd845d09fdf5a8efb2a1cb6bd8fc0d4c 809 Gene3D G3DSA:2.30.30.60 655 703 7.7E-13 T 18-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily CH53_1405 dd845d09fdf5a8efb2a1cb6bd8fc0d4c 809 SUPERFAMILY SSF82861 554 638 5.1E-12 T 18-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CH53_1405 dd845d09fdf5a8efb2a1cb6bd8fc0d4c 809 Pfam PF00924 Mechanosensitive ion channel 598 795 5.9E-41 T 18-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CH53_1405 dd845d09fdf5a8efb2a1cb6bd8fc0d4c 809 SUPERFAMILY SSF50182 640 704 2.88E-15 T 18-10-2018 IPR010920 LSM domain superfamily CH53_1405 dd845d09fdf5a8efb2a1cb6bd8fc0d4c 809 SUPERFAMILY SSF82689 713 798 3.14E-11 T 18-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CH53_1405 dd845d09fdf5a8efb2a1cb6bd8fc0d4c 809 Pfam PF12607 Protein of unknown function (DUF3772) 149 208 3.2E-17 T 18-10-2018 IPR022249 Domain of unknown function DUF3772 CH53_3874 861fca9ebb85f0730d3661696ae49701 544 Gene3D G3DSA:3.40.190.10 43 525 3.8E-190 T 18-10-2018 CH53_3874 861fca9ebb85f0730d3661696ae49701 544 SUPERFAMILY SSF53850 38 526 4.71E-136 T 18-10-2018 CH53_3874 861fca9ebb85f0730d3661696ae49701 544 Gene3D G3DSA:3.10.105.10 298 513 3.8E-190 T 18-10-2018 CH53_3874 861fca9ebb85f0730d3661696ae49701 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 464 1.7E-82 T 18-10-2018 IPR000914 Solute-binding protein family 5 domain CH53_3874 861fca9ebb85f0730d3661696ae49701 544 Gene3D G3DSA:3.90.76.10 72 195 3.8E-190 T 18-10-2018 CH53_3874 861fca9ebb85f0730d3661696ae49701 544 PIRSF PIRSF002741 6 543 8.6E-104 T 18-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 SMART SM00322 552 617 3.3E-12 T 18-10-2018 IPR004087 K Homology domain GO:0003676 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 SMART SM00316 620 690 6.1E-27 T 18-10-2018 IPR022967 RNA-binding domain, S1 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 Pfam PF00575 S1 RNA binding domain 619 690 3.3E-22 T 18-10-2018 IPR003029 S1 domain GO:0003676 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 9.2E-26 T 18-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 3.7E-15 T 18-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 1.7E-5 T 18-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 9.0E-22 T 18-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 2.2E-18 T 18-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.486 T 18-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 SUPERFAMILY SSF54791 554 622 1.71E-17 T 18-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 SUPERFAMILY SSF54211 291 488 5.06E-47 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 Gene3D G3DSA:3.30.230.70 236 549 2.3E-114 T 18-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 Gene3D G3DSA:3.30.1370.10 550 621 5.7E-19 T 18-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 Gene3D G3DSA:2.40.50.140 622 693 8.6E-29 T 18-10-2018 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 SUPERFAMILY SSF50249 608 692 2.23E-22 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 SUPERFAMILY SSF54211 5 144 8.1E-49 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 SUPERFAMILY SSF55666 145 234 9.26E-31 T 18-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 SUPERFAMILY SSF55666 450 548 5.19E-28 T 18-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 18-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 PIRSF PIRSF005499 2 705 7.8E-302 T 18-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 Gene3D G3DSA:3.30.230.70 4 235 4.5E-79 T 18-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CH53_1275 ece158e9a4395ed9f6eee58a8dd405d6 706 Pfam PF00013 KH domain 556 614 5.6E-9 T 18-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 CH53_3942 de0a818880f456eb61db21783670fc8d 381 Pfam PF13175 AAA ATPase domain 1 46 1.6E-8 T 18-10-2018 CH53_3942 de0a818880f456eb61db21783670fc8d 381 PIRSF PIRSF029347 1 381 1.6E-140 T 18-10-2018 IPR014555 RecF-like CH53_3942 de0a818880f456eb61db21783670fc8d 381 Gene3D G3DSA:3.40.50.300 1 76 3.1E-10 T 18-10-2018 CH53_3942 de0a818880f456eb61db21783670fc8d 381 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 249 345 2.6E-15 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CH53_3942 de0a818880f456eb61db21783670fc8d 381 SUPERFAMILY SSF52540 1 362 2.38E-26 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3942 de0a818880f456eb61db21783670fc8d 381 Gene3D G3DSA:3.40.50.300 225 369 5.8E-10 T 18-10-2018 CH53_3681 ed5e3c43ce7d956e947c400bd6ba6235 216 SUPERFAMILY SSF52172 7 136 5.55E-33 T 18-10-2018 IPR011006 CheY-like superfamily CH53_3681 ed5e3c43ce7d956e947c400bd6ba6235 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3681 ed5e3c43ce7d956e947c400bd6ba6235 216 SUPERFAMILY SSF46894 147 215 9.18E-20 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_3681 ed5e3c43ce7d956e947c400bd6ba6235 216 Pfam PF00072 Response regulator receiver domain 9 118 2.9E-28 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3681 ed5e3c43ce7d956e947c400bd6ba6235 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.8E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3681 ed5e3c43ce7d956e947c400bd6ba6235 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.8E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3681 ed5e3c43ce7d956e947c400bd6ba6235 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.8E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3681 ed5e3c43ce7d956e947c400bd6ba6235 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 4.9E-22 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3681 ed5e3c43ce7d956e947c400bd6ba6235 216 SMART SM00448 7 120 8.4E-33 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3681 ed5e3c43ce7d956e947c400bd6ba6235 216 SMART SM00421 153 210 4.9E-23 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3681 ed5e3c43ce7d956e947c400bd6ba6235 216 Gene3D G3DSA:3.40.50.12740 8 216 3.9E-61 T 18-10-2018 CH53_2120 b5affb4665c064b30f79ca4f08053ccb 309 SUPERFAMILY SSF52317 17 297 2.49E-100 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_2120 b5affb4665c064b30f79ca4f08053ccb 309 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 40.815 T 18-10-2018 IPR033752 MetA family CH53_2120 b5affb4665c064b30f79ca4f08053ccb 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.8E-131 T 18-10-2018 IPR033752 MetA family CH53_2120 b5affb4665c064b30f79ca4f08053ccb 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 7.6E-157 T 18-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 CH53_2120 b5affb4665c064b30f79ca4f08053ccb 309 Gene3D G3DSA:3.40.50.880 1 301 1.4E-119 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_2120 b5affb4665c064b30f79ca4f08053ccb 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-143 T 18-10-2018 CH53_2120 b5affb4665c064b30f79ca4f08053ccb 309 PIRSF PIRSF000450 1 308 1.3E-145 T 18-10-2018 IPR033752 MetA family CH53_3899 bd6925492bda8e50cd65855f5ab50315 520 Pfam PF00425 chorismate binding enzyme 242 502 1.6E-83 T 18-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CH53_3899 bd6925492bda8e50cd65855f5ab50315 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 1.3E-24 T 18-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CH53_3899 bd6925492bda8e50cd65855f5ab50315 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 1.3E-24 T 18-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CH53_3899 bd6925492bda8e50cd65855f5ab50315 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 1.3E-24 T 18-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CH53_3899 bd6925492bda8e50cd65855f5ab50315 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 1.3E-24 T 18-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CH53_3899 bd6925492bda8e50cd65855f5ab50315 520 PIRSF PIRSF001373 1 520 9.1E-250 T 18-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CH53_3899 bd6925492bda8e50cd65855f5ab50315 520 Gene3D G3DSA:3.60.120.10 1 520 3.7E-197 T 18-10-2018 IPR005801 ADC synthase GO:0009058 CH53_3899 bd6925492bda8e50cd65855f5ab50315 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 7.6E-243 T 18-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CH53_3899 bd6925492bda8e50cd65855f5ab50315 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 192 7.2E-16 T 18-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CH53_3899 bd6925492bda8e50cd65855f5ab50315 520 SUPERFAMILY SSF56322 8 515 5.63E-164 T 18-10-2018 IPR005801 ADC synthase GO:0009058 CH53_2799 afbebbf1cee5762961add95c56310ec0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 2.9E-98 T 18-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CH53_2799 afbebbf1cee5762961add95c56310ec0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 2.9E-98 T 18-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CH53_2799 afbebbf1cee5762961add95c56310ec0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 2.9E-98 T 18-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CH53_2799 afbebbf1cee5762961add95c56310ec0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 2.9E-98 T 18-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CH53_2799 afbebbf1cee5762961add95c56310ec0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 2.9E-98 T 18-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CH53_2799 afbebbf1cee5762961add95c56310ec0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 2.9E-98 T 18-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CH53_2799 afbebbf1cee5762961add95c56310ec0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 2.9E-98 T 18-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CH53_2799 afbebbf1cee5762961add95c56310ec0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 2.9E-98 T 18-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CH53_2799 afbebbf1cee5762961add95c56310ec0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 2.9E-98 T 18-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CH53_2799 afbebbf1cee5762961add95c56310ec0 486 Gene3D G3DSA:3.40.630.10 1 229 4.8E-64 T 18-10-2018 CH53_2799 afbebbf1cee5762961add95c56310ec0 486 Pfam PF01546 Peptidase family M20/M25/M40 72 480 1.7E-19 T 18-10-2018 IPR002933 Peptidase M20 GO:0016787 CH53_2799 afbebbf1cee5762961add95c56310ec0 486 PIRSF PIRSF016599 1 485 8.7E-210 T 18-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CH53_2799 afbebbf1cee5762961add95c56310ec0 486 SUPERFAMILY SSF53187 10 482 1.07E-65 T 18-10-2018 CH53_2799 afbebbf1cee5762961add95c56310ec0 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 1.3E-180 T 18-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CH53_2799 afbebbf1cee5762961add95c56310ec0 486 Gene3D G3DSA:3.40.630.10 369 486 7.8E-24 T 18-10-2018 CH53_2799 afbebbf1cee5762961add95c56310ec0 486 Pfam PF07687 Peptidase dimerisation domain 207 292 2.1E-4 T 18-10-2018 IPR011650 Peptidase M20, dimerisation domain CH53_109 b20e8f7a724ee31903ec48ce32cfd695 152 Gene3D G3DSA:3.40.50.1380 1 152 1.1E-67 T 18-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CH53_109 b20e8f7a724ee31903ec48ce32cfd695 152 SMART SM00851 25 118 9.7E-27 T 18-10-2018 IPR011607 Methylglyoxal synthase-like domain CH53_109 b20e8f7a724ee31903ec48ce32cfd695 152 PIRSF PIRSF006614 8 151 2.5E-66 T 18-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CH53_109 b20e8f7a724ee31903ec48ce32cfd695 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.506 T 18-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CH53_109 b20e8f7a724ee31903ec48ce32cfd695 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 6.1E-66 T 18-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CH53_109 b20e8f7a724ee31903ec48ce32cfd695 152 SUPERFAMILY SSF52335 7 151 9.04E-57 T 18-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CH53_109 b20e8f7a724ee31903ec48ce32cfd695 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 72 - T 18-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CH53_109 b20e8f7a724ee31903ec48ce32cfd695 152 Pfam PF02142 MGS-like domain 26 118 5.1E-19 T 18-10-2018 IPR011607 Methylglyoxal synthase-like domain CH53_972 a7444b42f800597a47e529804192bf41 297 Gene3D G3DSA:3.40.50.620 75 212 6.2E-109 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_972 a7444b42f800597a47e529804192bf41 297 Gene3D G3DSA:3.40.50.620 1 278 6.2E-109 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_972 a7444b42f800597a47e529804192bf41 297 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 229 3.3E-43 T 18-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 CH53_972 a7444b42f800597a47e529804192bf41 297 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 1 258 4.4E-110 T 18-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 CH53_972 a7444b42f800597a47e529804192bf41 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 188 1.2E-12 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CH53_972 a7444b42f800597a47e529804192bf41 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 45 1.2E-12 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CH53_972 a7444b42f800597a47e529804192bf41 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 164 174 1.2E-12 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CH53_972 a7444b42f800597a47e529804192bf41 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 3 15 1.2E-12 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CH53_972 a7444b42f800597a47e529804192bf41 297 SUPERFAMILY SSF52374 1 278 5.63E-83 T 18-10-2018 CH53_972 a7444b42f800597a47e529804192bf41 297 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 1 284 38.676 T 18-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 CH53_1313 3f19160ee8caf3f3813b5405ed8b0cb2 212 SUPERFAMILY SSF55068 6 208 2.62E-80 T 18-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CH53_1313 3f19160ee8caf3f3813b5405ed8b0cb2 212 Gene3D G3DSA:3.30.1060.10 5 212 3.3E-85 T 18-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CH53_1313 3f19160ee8caf3f3813b5405ed8b0cb2 212 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 5.4E-64 T 18-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CH53_1313 3f19160ee8caf3f3813b5405ed8b0cb2 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 199 1.8E-64 T 18-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CH53_1313 3f19160ee8caf3f3813b5405ed8b0cb2 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 37.426 T 18-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CH53_3275 7cc43484af9a821264b98389f5f462c7 715 PIRSF PIRSF000144 543 691 1.0 T 18-10-2018 CH53_3275 7cc43484af9a821264b98389f5f462c7 715 PIRSF PIRSF000144 53 439 2.1E-54 T 18-10-2018 CH53_3275 7cc43484af9a821264b98389f5f462c7 715 SUPERFAMILY SSF53706 4 561 2.36E-196 T 18-10-2018 CH53_3275 7cc43484af9a821264b98389f5f462c7 715 SMART SM00926 1 54 3.2E-15 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3275 7cc43484af9a821264b98389f5f462c7 715 Gene3D G3DSA:2.20.25.90 1 55 8.3E-17 T 18-10-2018 CH53_3275 7cc43484af9a821264b98389f5f462c7 715 Gene3D G3DSA:3.40.228.10 142 340 2.8E-176 T 18-10-2018 CH53_3275 7cc43484af9a821264b98389f5f462c7 715 Pfam PF00384 Molybdopterin oxidoreductase 61 485 3.3E-96 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3275 7cc43484af9a821264b98389f5f462c7 715 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 6 683 3.1E-278 T 18-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 CH53_3275 7cc43484af9a821264b98389f5f462c7 715 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 23 - T 18-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 CH53_3275 7cc43484af9a821264b98389f5f462c7 715 Pfam PF01568 Molydopterin dinucleotide binding domain 574 681 9.1E-28 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CH53_3275 7cc43484af9a821264b98389f5f462c7 715 Gene3D G3DSA:3.40.50.740 66 530 2.8E-176 T 18-10-2018 CH53_3275 7cc43484af9a821264b98389f5f462c7 715 Gene3D G3DSA:2.40.40.20 571 687 5.4E-41 T 18-10-2018 CH53_3275 7cc43484af9a821264b98389f5f462c7 715 SUPERFAMILY SSF50692 564 701 8.82E-42 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CH53_3275 7cc43484af9a821264b98389f5f462c7 715 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 2 53 2.5E-13 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_1044 01f0aae4854674b0d20205a18443d6bb 299 Gene3D G3DSA:3.30.70.20 47 99 5.8E-5 T 18-10-2018 CH53_1044 01f0aae4854674b0d20205a18443d6bb 299 Pfam PF13353 4Fe-4S single cluster domain 12 153 1.1E-11 T 18-10-2018 CH53_1044 01f0aae4854674b0d20205a18443d6bb 299 Gene3D G3DSA:3.20.20.70 1 46 1.1E-14 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_1044 01f0aae4854674b0d20205a18443d6bb 299 Gene3D G3DSA:3.80.30.10 121 299 2.0E-54 T 18-10-2018 CH53_1044 01f0aae4854674b0d20205a18443d6bb 299 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 2 291 2.4E-105 T 18-10-2018 CH53_1044 01f0aae4854674b0d20205a18443d6bb 299 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 18-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CH53_1044 01f0aae4854674b0d20205a18443d6bb 299 SUPERFAMILY SSF102114 125 262 1.57E-18 T 18-10-2018 CH53_1044 01f0aae4854674b0d20205a18443d6bb 299 SUPERFAMILY SSF54862 4 144 1.85E-7 T 18-10-2018 CH53_1044 01f0aae4854674b0d20205a18443d6bb 299 PIRSF PIRSF000371 1 297 4.8E-94 T 18-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CH53_1044 01f0aae4854674b0d20205a18443d6bb 299 Pfam PF04055 Radical SAM superfamily 19 228 3.2E-23 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_1237 212f6d0f26c8de8d6aba78ea8b8e1c4a 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 18-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CH53_1237 212f6d0f26c8de8d6aba78ea8b8e1c4a 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 2.0E-33 T 18-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CH53_1237 212f6d0f26c8de8d6aba78ea8b8e1c4a 503 SUPERFAMILY SSF52949 1 184 8.24E-52 T 18-10-2018 CH53_1237 212f6d0f26c8de8d6aba78ea8b8e1c4a 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.246 T 18-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CH53_1237 212f6d0f26c8de8d6aba78ea8b8e1c4a 503 Gene3D G3DSA:3.40.220.10 1 159 3.3E-59 T 18-10-2018 CH53_1237 212f6d0f26c8de8d6aba78ea8b8e1c4a 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 1.2E-122 T 18-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CH53_1237 212f6d0f26c8de8d6aba78ea8b8e1c4a 503 SUPERFAMILY SSF53187 180 496 1.1E-124 T 18-10-2018 CH53_1237 212f6d0f26c8de8d6aba78ea8b8e1c4a 503 Gene3D G3DSA:3.40.630.10 181 498 1.2E-141 T 18-10-2018 CH53_1237 212f6d0f26c8de8d6aba78ea8b8e1c4a 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 3.3E-54 T 18-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CH53_1237 212f6d0f26c8de8d6aba78ea8b8e1c4a 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 3.3E-54 T 18-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CH53_1237 212f6d0f26c8de8d6aba78ea8b8e1c4a 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 3.3E-54 T 18-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CH53_1237 212f6d0f26c8de8d6aba78ea8b8e1c4a 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 3.3E-54 T 18-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CH53_1237 212f6d0f26c8de8d6aba78ea8b8e1c4a 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 3.3E-54 T 18-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CH53_867 52eb342ea6c0f603b2765e7d85fe77c5 140 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 113 6.7E-36 T 18-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 CH53_867 52eb342ea6c0f603b2765e7d85fe77c5 140 Pfam PF03610 PTS system fructose IIA component 4 113 3.3E-15 T 18-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CH53_867 52eb342ea6c0f603b2765e7d85fe77c5 140 SUPERFAMILY SSF53062 1 129 3.79E-30 T 18-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CH53_867 52eb342ea6c0f603b2765e7d85fe77c5 140 Gene3D G3DSA:3.40.50.510 1 139 6.4E-31 T 18-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CH53_2338 ea51c4b4c722f2c04988fa0903edd395 98 Pfam PF04380 Membrane fusogenic activity 1 78 3.4E-28 T 18-10-2018 IPR007475 Membrane fusogenic activity CH53_765 d89ed7dcbd831c182ea549141675b998 239 Gene3D G3DSA:3.40.50.150 51 194 1.8E-12 T 18-10-2018 CH53_765 d89ed7dcbd831c182ea549141675b998 239 Pfam PF08241 Methyltransferase domain 77 125 7.7E-9 T 18-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CH53_765 d89ed7dcbd831c182ea549141675b998 239 SUPERFAMILY SSF53335 78 185 6.81E-15 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_2178 c6fedb89fcf6ddb3cddaf19a81fa3f2a 498 Pfam PF00005 ABC transporter 274 428 4.2E-22 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2178 c6fedb89fcf6ddb3cddaf19a81fa3f2a 498 Gene3D G3DSA:3.40.50.300 253 497 7.8E-43 T 18-10-2018 CH53_2178 c6fedb89fcf6ddb3cddaf19a81fa3f2a 498 Pfam PF00005 ABC transporter 23 174 3.2E-29 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2178 c6fedb89fcf6ddb3cddaf19a81fa3f2a 498 SUPERFAMILY SSF52540 7 234 3.03E-56 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2178 c6fedb89fcf6ddb3cddaf19a81fa3f2a 498 SUPERFAMILY SSF52540 271 489 2.3E-42 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2178 c6fedb89fcf6ddb3cddaf19a81fa3f2a 498 SMART SM00382 282 477 0.0062 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2178 c6fedb89fcf6ddb3cddaf19a81fa3f2a 498 SMART SM00382 32 222 4.2E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2178 c6fedb89fcf6ddb3cddaf19a81fa3f2a 498 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2178 c6fedb89fcf6ddb3cddaf19a81fa3f2a 498 Gene3D G3DSA:3.40.50.300 2 239 1.0E-57 T 18-10-2018 CH53_3453 19788aa035f0dc6927cc997cc3ec6ad2 430 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 2.3E-130 T 18-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 CH53_3453 19788aa035f0dc6927cc997cc3ec6ad2 430 PIRSF PIRSF006066 1 428 7.1E-176 T 18-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 CH53_3453 19788aa035f0dc6927cc997cc3ec6ad2 430 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 417 1.9E-112 T 18-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CH53_1798 cb09bd2387ec900947175c0dc90b3b59 175 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 4.2E-43 T 18-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CH53_1798 cb09bd2387ec900947175c0dc90b3b59 175 Gene3D G3DSA:2.20.25.120 52 84 9.2E-58 T 18-10-2018 CH53_1798 cb09bd2387ec900947175c0dc90b3b59 175 SUPERFAMILY SSF52540 6 168 2.95E-23 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1798 cb09bd2387ec900947175c0dc90b3b59 175 Gene3D G3DSA:3.40.50.300 9 164 9.2E-58 T 18-10-2018 CH53_1798 cb09bd2387ec900947175c0dc90b3b59 175 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 3.6E-47 T 18-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CH53_3943 6544a0650a0c7201447ca55112b170cf 500 Pfam PF02610 L-arabinose isomerase 5 359 1.2E-177 T 18-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 CH53_3943 6544a0650a0c7201447ca55112b170cf 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 304 5.0E-178 T 18-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 CH53_3943 6544a0650a0c7201447ca55112b170cf 500 PIRSF PIRSF001478 1 500 5.5E-259 T 18-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 CH53_3943 6544a0650a0c7201447ca55112b170cf 500 SUPERFAMILY SSF50443 329 498 6.54E-72 T 18-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal CH53_3943 6544a0650a0c7201447ca55112b170cf 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 1.4E-46 T 18-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 CH53_3943 6544a0650a0c7201447ca55112b170cf 500 SUPERFAMILY SSF53743 1 326 3.14E-123 T 18-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 CH53_3943 6544a0650a0c7201447ca55112b170cf 500 Gene3D G3DSA:3.40.50.10940 1 175 9.8E-89 T 18-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 CH53_3943 6544a0650a0c7201447ca55112b170cf 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 477 64.591 T 18-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 CH53_1961 eef3172ce0280841c1de80290a8cc81f 885 Gene3D G3DSA:2.60.40.2610 710 800 1.1E-29 T 18-10-2018 CH53_1961 eef3172ce0280841c1de80290a8cc81f 885 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 336 346 - T 18-10-2018 IPR018030 Fimbrial membrane usher, conserved site CH53_1961 eef3172ce0280841c1de80290a8cc81f 885 Gene3D G3DSA:2.60.40.3110 294 383 2.8E-35 T 18-10-2018 CH53_1961 eef3172ce0280841c1de80290a8cc81f 885 Pfam PF13953 PapC C-terminal domain 804 867 2.3E-18 T 18-10-2018 IPR025949 PapC-like, C-terminal domain CH53_1961 eef3172ce0280841c1de80290a8cc81f 885 Gene3D G3DSA:3.10.20.410 40 181 2.2E-21 T 18-10-2018 CH53_1961 eef3172ce0280841c1de80290a8cc81f 885 Pfam PF00577 Outer membrane usher protein 223 795 2.2E-148 T 18-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 CH53_1961 eef3172ce0280841c1de80290a8cc81f 885 SUPERFAMILY SSF141729 64 192 1.18E-22 T 18-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 CH53_1961 eef3172ce0280841c1de80290a8cc81f 885 Gene3D G3DSA:2.60.40.2070 802 885 5.8E-18 T 18-10-2018 CH53_1961 eef3172ce0280841c1de80290a8cc81f 885 Pfam PF13954 PapC N-terminal domain 42 203 9.7E-35 T 18-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 CH53_1230 068c5f8b27d2f5fc65c1b110d43f159f 437 Pfam PF12358 Protein of unknown function (DUF3644) 128 194 5.8E-12 T 18-10-2018 IPR022104 Protein of unknown function DUF3644 CH53_468 5e05edb03d1eb633a61524a425a4af87 192 Hamap MF_00780 Protein YceI [yceI]. 2 192 44.58 T 18-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI CH53_468 5e05edb03d1eb633a61524a425a4af87 192 SUPERFAMILY SSF101874 23 191 2.09E-56 T 18-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CH53_468 5e05edb03d1eb633a61524a425a4af87 192 SMART SM00867 25 189 1.0E-71 T 18-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CH53_468 5e05edb03d1eb633a61524a425a4af87 192 Gene3D G3DSA:2.40.128.110 24 192 1.2E-55 T 18-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CH53_468 5e05edb03d1eb633a61524a425a4af87 192 Pfam PF04264 YceI-like domain 26 187 8.0E-41 T 18-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CH53_1326 8ea403e8e63244574966c0fad6ce1149 91 Gene3D G3DSA:3.30.1660.10 20 91 8.4E-23 T 18-10-2018 IPR025543 Dodecin-like CH53_1326 8ea403e8e63244574966c0fad6ce1149 91 SUPERFAMILY SSF159871 1 91 3.01E-24 T 18-10-2018 IPR036275 YdgH-like superfamily CH53_1326 8ea403e8e63244574966c0fad6ce1149 91 Pfam PF07338 Protein of unknown function (DUF1471) 37 91 4.3E-19 T 18-10-2018 IPR010854 Domain of unknown function DUF1471 CH53_3718 b359f93ba395acd717658e655d49ddb8 444 SUPERFAMILY SSF53448 67 345 5.12E-65 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_3718 b359f93ba395acd717658e655d49ddb8 444 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 30 438 6.2E-194 T 18-10-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 CH53_3718 b359f93ba395acd717658e655d49ddb8 444 Gene3D G3DSA:3.90.550.10 68 286 1.1E-44 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_3718 b359f93ba395acd717658e655d49ddb8 444 Pfam PF00535 Glycosyl transferase family 2 78 245 9.5E-36 T 18-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CH53_3727 85013f977e35deaa2e7cc35a8def4a3b 593 SUPERFAMILY SSF55874 464 585 2.26E-15 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3727 85013f977e35deaa2e7cc35a8def4a3b 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 500 585 6.5E-6 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3727 85013f977e35deaa2e7cc35a8def4a3b 593 PIRSF PIRSF003167 1 593 5.6E-194 T 18-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 CH53_3727 85013f977e35deaa2e7cc35a8def4a3b 593 Pfam PF07730 Histidine kinase 392 455 2.9E-17 T 18-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CH53_3727 85013f977e35deaa2e7cc35a8def4a3b 593 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 126 7.2E-7 T 18-10-2018 IPR029095 NarX-like, N-terminal CH53_3727 85013f977e35deaa2e7cc35a8def4a3b 593 Pfam PF00672 HAMP domain 173 221 1.6E-10 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_3727 85013f977e35deaa2e7cc35a8def4a3b 593 SMART SM00387 496 589 1.4E-5 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3727 85013f977e35deaa2e7cc35a8def4a3b 593 SMART SM00304 173 226 2.5E-12 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_3727 85013f977e35deaa2e7cc35a8def4a3b 593 Gene3D G3DSA:1.20.120.960 39 145 2.8E-38 T 18-10-2018 CH53_3727 85013f977e35deaa2e7cc35a8def4a3b 593 SUPERFAMILY SSF158472 173 221 5.75E-8 T 18-10-2018 CH53_3727 85013f977e35deaa2e7cc35a8def4a3b 593 Gene3D G3DSA:3.30.565.10 456 590 2.5E-25 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3727 85013f977e35deaa2e7cc35a8def4a3b 593 Gene3D G3DSA:1.10.287.130 171 276 3.3E-7 T 18-10-2018 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 18-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 SUPERFAMILY SSF51621 252 549 4.19E-110 T 18-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 6.6E-259 T 18-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 PIRSF PIRSF000732 1 574 2.6E-218 T 18-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 18-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 541 3.6E-125 T 18-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 SUPERFAMILY SSF52009 125 245 1.44E-36 T 18-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 Gene3D G3DSA:3.50.30.10 4 233 1.7E-83 T 18-10-2018 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 SUPERFAMILY SSF47831 23 143 1.18E-34 T 18-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 4.5E-31 T 18-10-2018 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 4.5E-31 T 18-10-2018 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 4.5E-31 T 18-10-2018 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 4.5E-31 T 18-10-2018 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 Gene3D G3DSA:1.10.274.10 21 146 1.7E-83 T 18-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.0E-30 T 18-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.1E-22 T 18-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CH53_526 d19a480d5a8e9d63df8cd5df85cb9502 575 Gene3D G3DSA:3.20.20.60 234 575 3.5E-127 T 18-10-2018 CH53_2430 4c086050fe74490aae2329fae5f636dd 319 SUPERFAMILY SSF81345 5 313 2.48E-67 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_2430 4c086050fe74490aae2329fae5f636dd 319 Gene3D G3DSA:1.10.3470.10 2 318 1.3E-64 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_2430 4c086050fe74490aae2329fae5f636dd 319 Pfam PF01032 FecCD transport family 13 313 1.3E-64 T 18-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CH53_2931 733a9a22736f5b666867a0bcd1576a02 179 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 15 168 32.719 T 18-10-2018 IPR033747 Class I PurE CH53_2931 733a9a22736f5b666867a0bcd1576a02 179 Gene3D G3DSA:3.40.50.7700 1 173 9.6E-78 T 18-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 CH53_2931 733a9a22736f5b666867a0bcd1576a02 179 Pfam PF00731 AIR carboxylase 14 162 2.0E-63 T 18-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CH53_2931 733a9a22736f5b666867a0bcd1576a02 179 SMART SM01001 13 164 1.3E-100 T 18-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CH53_2931 733a9a22736f5b666867a0bcd1576a02 179 SUPERFAMILY SSF52255 14 170 8.24E-66 T 18-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 CH53_2931 733a9a22736f5b666867a0bcd1576a02 179 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 15 168 2.1E-65 T 18-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CH53_2931 733a9a22736f5b666867a0bcd1576a02 179 PIRSF PIRSF001338 10 173 7.5E-67 T 18-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 CH53_3417 898ab4bdbda2008e7027c2877bcb60f8 840 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 620 766 2.1E-52 T 18-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal CH53_3417 898ab4bdbda2008e7027c2877bcb60f8 840 Pfam PF05954 Phage late control gene D protein (GPD) 41 362 2.4E-64 T 18-10-2018 CH53_3417 898ab4bdbda2008e7027c2877bcb60f8 840 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 34 524 2.1E-103 T 18-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CH53_3417 898ab4bdbda2008e7027c2877bcb60f8 840 SUPERFAMILY SSF69279 207 391 1.62E-44 T 18-10-2018 CH53_3417 898ab4bdbda2008e7027c2877bcb60f8 840 Gene3D G3DSA:2.30.110.50 37 340 1.1E-55 T 18-10-2018 CH53_3417 898ab4bdbda2008e7027c2877bcb60f8 840 Gene3D G3DSA:2.40.50.230 396 479 3.4E-31 T 18-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily CH53_3417 898ab4bdbda2008e7027c2877bcb60f8 840 Gene3D G3DSA:3.30.1920.30 243 316 1.1E-55 T 18-10-2018 CH53_3417 898ab4bdbda2008e7027c2877bcb60f8 840 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 498 601 2.2E-36 T 18-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain CH53_3417 898ab4bdbda2008e7027c2877bcb60f8 840 SUPERFAMILY SSF69349 470 688 1.65E-5 T 18-10-2018 CH53_3417 898ab4bdbda2008e7027c2877bcb60f8 840 SUPERFAMILY SSF69279 22 205 1.59E-49 T 18-10-2018 CH53_3417 898ab4bdbda2008e7027c2877bcb60f8 840 Gene3D G3DSA:3.55.50.10 114 210 1.1E-55 T 18-10-2018 CH53_3417 898ab4bdbda2008e7027c2877bcb60f8 840 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 24 526 2.0E-78 T 18-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CH53_3417 898ab4bdbda2008e7027c2877bcb60f8 840 SUPERFAMILY SSF69255 390 480 2.88E-23 T 18-10-2018 CH53_1650 c2c7060c156fca0eaa0c0abaebb68851 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 4.4E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1650 c2c7060c156fca0eaa0c0abaebb68851 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 4.4E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1650 c2c7060c156fca0eaa0c0abaebb68851 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 4.4E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1650 c2c7060c156fca0eaa0c0abaebb68851 196 SMART SM00448 3 113 2.7E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1650 c2c7060c156fca0eaa0c0abaebb68851 196 Pfam PF00072 Response regulator receiver domain 6 114 1.9E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1650 c2c7060c156fca0eaa0c0abaebb68851 196 SUPERFAMILY SSF46894 123 194 1.87E-20 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_1650 c2c7060c156fca0eaa0c0abaebb68851 196 Gene3D G3DSA:3.40.50.12740 4 195 4.3E-51 T 18-10-2018 CH53_1650 c2c7060c156fca0eaa0c0abaebb68851 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 190 5.7E-20 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1650 c2c7060c156fca0eaa0c0abaebb68851 196 SUPERFAMILY SSF52172 2 129 3.42E-24 T 18-10-2018 IPR011006 CheY-like superfamily CH53_1650 c2c7060c156fca0eaa0c0abaebb68851 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1650 c2c7060c156fca0eaa0c0abaebb68851 196 SMART SM00421 136 193 2.6E-22 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_981 ea4ae3a5b96b8eabbb4c9841259669ed 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_981 ea4ae3a5b96b8eabbb4c9841259669ed 308 Pfam PF00005 ABC transporter 21 165 1.3E-31 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_981 ea4ae3a5b96b8eabbb4c9841259669ed 308 SUPERFAMILY SSF52540 3 233 1.6E-63 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_981 ea4ae3a5b96b8eabbb4c9841259669ed 308 Gene3D G3DSA:3.40.50.300 1 234 7.4E-66 T 18-10-2018 CH53_981 ea4ae3a5b96b8eabbb4c9841259669ed 308 SMART SM00382 30 213 1.4E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2332 c2df184598b235d22b906f1477080a9d 412 Pfam PF01966 HD domain 229 327 1.2E-13 T 18-10-2018 IPR006674 HD domain CH53_2332 c2df184598b235d22b906f1477080a9d 412 SUPERFAMILY SSF81301 1 119 8.07E-30 T 18-10-2018 CH53_2332 c2df184598b235d22b906f1477080a9d 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 211 1.8E-14 T 18-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CH53_2332 c2df184598b235d22b906f1477080a9d 412 Pfam PF01743 Poly A polymerase head domain 3 122 7.8E-17 T 18-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CH53_2332 c2df184598b235d22b906f1477080a9d 412 Gene3D G3DSA:3.30.460.10 1 121 2.9E-26 T 18-10-2018 CH53_2332 c2df184598b235d22b906f1477080a9d 412 SMART SM00471 224 359 3.7E-4 T 18-10-2018 IPR003607 HD/PDEase domain CH53_2332 c2df184598b235d22b906f1477080a9d 412 SUPERFAMILY SSF81891 121 402 6.02E-55 T 18-10-2018 CH53_2332 c2df184598b235d22b906f1477080a9d 412 Gene3D G3DSA:1.10.3090.10 122 411 2.0E-43 T 18-10-2018 CH53_2332 c2df184598b235d22b906f1477080a9d 412 PIRSF PIRSF000813 1 408 5.8E-201 T 18-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CH53_2332 c2df184598b235d22b906f1477080a9d 412 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.14 T 18-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CH53_2332 c2df184598b235d22b906f1477080a9d 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 46.283 T 18-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CH53_191 e2aee107e9da789f7f64b0f1a12d9ad5 242 SMART SM00382 27 218 1.4E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_191 e2aee107e9da789f7f64b0f1a12d9ad5 242 Pfam PF00005 ABC transporter 20 170 2.8E-35 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_191 e2aee107e9da789f7f64b0f1a12d9ad5 242 Gene3D G3DSA:3.40.50.300 1 241 1.6E-69 T 18-10-2018 CH53_191 e2aee107e9da789f7f64b0f1a12d9ad5 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_191 e2aee107e9da789f7f64b0f1a12d9ad5 242 PIRSF PIRSF039085 1 242 1.9E-83 T 18-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CH53_191 e2aee107e9da789f7f64b0f1a12d9ad5 242 SUPERFAMILY SSF52540 3 234 7.61E-69 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2706 d00b2fb5e1abad6516bf2eed9b1f694b 305 Gene3D G3DSA:3.40.190.10 163 262 7.4E-60 T 18-10-2018 CH53_2706 d00b2fb5e1abad6516bf2eed9b1f694b 305 Gene3D G3DSA:1.10.10.10 7 94 2.4E-24 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2706 d00b2fb5e1abad6516bf2eed9b1f694b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.2E-9 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2706 d00b2fb5e1abad6516bf2eed9b1f694b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.2E-9 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2706 d00b2fb5e1abad6516bf2eed9b1f694b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.2E-9 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2706 d00b2fb5e1abad6516bf2eed9b1f694b 305 SUPERFAMILY SSF53850 93 296 1.07E-39 T 18-10-2018 CH53_2706 d00b2fb5e1abad6516bf2eed9b1f694b 305 Pfam PF03466 LysR substrate binding domain 91 292 6.0E-39 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_2706 d00b2fb5e1abad6516bf2eed9b1f694b 305 SUPERFAMILY SSF46785 3 87 5.94E-24 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2706 d00b2fb5e1abad6516bf2eed9b1f694b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.3E-21 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2706 d00b2fb5e1abad6516bf2eed9b1f694b 305 Gene3D G3DSA:3.40.190.10 103 288 7.4E-60 T 18-10-2018 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 SMART SM00493 3 138 1.0E-33 T 18-10-2018 IPR006171 TOPRIM domain CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 18-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 SMART SM00436 139 227 3.4E-48 T 18-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 SUPERFAMILY SSF56712 3 615 3.66E-202 T 18-10-2018 IPR023405 DNA topoisomerase, type IA, core domain CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 Gene3D G3DSA:2.70.20.10 219 479 2.9E-164 T 18-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 SUPERFAMILY SSF57783 709 749 2.72E-7 T 18-10-2018 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 Gene3D G3DSA:3.30.65.10 751 813 5.5E-32 T 18-10-2018 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 Gene3D G3DSA:3.30.65.10 706 750 5.9E-6 T 18-10-2018 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 Pfam PF08272 Topoisomerase I zinc-ribbon-like 764 799 2.9E-12 T 18-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 Pfam PF08272 Topoisomerase I zinc-ribbon-like 830 869 1.4E-22 T 18-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 738 54.868 T 18-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 SUPERFAMILY SSF57783 751 813 3.57E-19 T 18-10-2018 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 SUPERFAMILY SSF57783 815 870 8.5E-23 T 18-10-2018 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 SMART SM00437 278 533 2.0E-119 T 18-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 Gene3D G3DSA:1.10.460.10 171 577 2.9E-164 T 18-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 7.6E-6 T 18-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 715 750 1.1E-11 T 18-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 Gene3D G3DSA:1.10.290.10 286 410 2.9E-164 T 18-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 Pfam PF01131 DNA topoisomerase 163 571 2.8E-127 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 Pfam PF01751 Toprim domain 5 148 7.9E-33 T 18-10-2018 IPR006171 TOPRIM domain CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 Gene3D G3DSA:2.20.25.10 814 871 1.6E-31 T 18-10-2018 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 6.1E-37 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 6.1E-37 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 6.1E-37 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 6.1E-37 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 6.1E-37 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 Gene3D G3DSA:3.40.50.140 1 169 1.9E-67 T 18-10-2018 CH53_3908 9160f0c78c5933fdc27b059783ac1f6d 871 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 641 4.7E-256 T 18-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CH53_69 842a0827cf5a62201e2b89b21a677c44 259 Gene3D G3DSA:3.20.20.150 1 259 6.4E-78 T 18-10-2018 CH53_69 842a0827cf5a62201e2b89b21a677c44 259 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 255 1.1E-115 T 18-10-2018 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 CH53_69 842a0827cf5a62201e2b89b21a677c44 259 SUPERFAMILY SSF51658 1 257 1.44E-82 T 18-10-2018 IPR036237 Xylose isomerase-like superfamily CH53_69 842a0827cf5a62201e2b89b21a677c44 259 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 2.2E-31 T 18-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CH53_69 842a0827cf5a62201e2b89b21a677c44 259 PIRSF PIRSF006241 1 259 5.8E-97 T 18-10-2018 IPR026040 Hydroxypyruvate isomerase-like CH53_3407 1df2e29b1ec68eaad0683d38f52f1a27 166 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 158 4.1E-57 T 18-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CH53_3407 1df2e29b1ec68eaad0683d38f52f1a27 166 PIRSF PIRSF028301 1 165 8.1E-56 T 18-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CH53_3407 1df2e29b1ec68eaad0683d38f52f1a27 166 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 159 7.3E-54 T 18-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CH53_195 3232e7c75bb44f0aeabaf70a1a33d73b 262 SUPERFAMILY SSF55781 71 258 1.44E-43 T 18-10-2018 CH53_195 3232e7c75bb44f0aeabaf70a1a33d73b 262 SUPERFAMILY SSF46785 16 86 1.66E-14 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_195 3232e7c75bb44f0aeabaf70a1a33d73b 262 Pfam PF01614 Bacterial transcriptional regulator 134 255 1.6E-23 T 18-10-2018 IPR014757 Transcription regulator IclR, C-terminal CH53_195 3232e7c75bb44f0aeabaf70a1a33d73b 262 Gene3D G3DSA:3.30.450.40 87 261 2.6E-53 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_195 3232e7c75bb44f0aeabaf70a1a33d73b 262 Gene3D G3DSA:1.10.10.10 9 86 1.5E-27 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_195 3232e7c75bb44f0aeabaf70a1a33d73b 262 Pfam PF09339 IclR helix-turn-helix domain 16 63 5.6E-14 T 18-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CH53_195 3232e7c75bb44f0aeabaf70a1a33d73b 262 SMART SM00346 14 103 9.7E-16 T 18-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CH53_2806 ecdfa5904202588a05845e7f0decb0e3 306 SUPERFAMILY SSF110581 4 302 8.5E-116 T 18-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 CH53_2806 ecdfa5904202588a05845e7f0decb0e3 306 Gene3D G3DSA:3.40.1790.10 1 306 2.1E-137 T 18-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 CH53_2806 ecdfa5904202588a05845e7f0decb0e3 306 Pfam PF04227 Indigoidine synthase A like protein 11 300 5.0E-131 T 18-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 CH53_2806 ecdfa5904202588a05845e7f0decb0e3 306 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 10 304 42.931 T 18-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 CH53_536 a2d34fe2fa33c0374dc8d6f67ce187bb 392 SUPERFAMILY SSF53756 47 321 1.18E-5 T 18-10-2018 CH53_536 a2d34fe2fa33c0374dc8d6f67ce187bb 392 Pfam PF05159 Capsule polysaccharide biosynthesis protein 62 368 1.1E-86 T 18-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 CH53_4009 0ff765bc8a17ec69ab91ea5d6a3cb80b 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 57 195 5.3E-8 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_4009 0ff765bc8a17ec69ab91ea5d6a3cb80b 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 5.2E-14 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_4009 0ff765bc8a17ec69ab91ea5d6a3cb80b 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 3.5E-20 T 18-10-2018 CH53_4009 0ff765bc8a17ec69ab91ea5d6a3cb80b 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.2E-5 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_4009 0ff765bc8a17ec69ab91ea5d6a3cb80b 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 1.2E-5 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_4009 0ff765bc8a17ec69ab91ea5d6a3cb80b 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.2E-5 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_4009 0ff765bc8a17ec69ab91ea5d6a3cb80b 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.2E-5 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_4009 0ff765bc8a17ec69ab91ea5d6a3cb80b 224 Gene3D G3DSA:3.40.50.1000 5 218 6.6E-62 T 18-10-2018 IPR023214 HAD superfamily CH53_4009 0ff765bc8a17ec69ab91ea5d6a3cb80b 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 221 1.3E-75 T 18-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 CH53_4009 0ff765bc8a17ec69ab91ea5d6a3cb80b 224 SUPERFAMILY SSF56784 2 222 3.16E-47 T 18-10-2018 IPR036412 HAD-like superfamily CH53_4009 0ff765bc8a17ec69ab91ea5d6a3cb80b 224 Gene3D G3DSA:1.10.150.240 16 95 6.6E-62 T 18-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CH53_4070 eb15a7bd2164ae9b961f60096a23a9b2 271 SUPERFAMILY SSF52540 5 249 5.43E-59 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4070 eb15a7bd2164ae9b961f60096a23a9b2 271 SMART SM00382 39 228 1.4E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_4070 eb15a7bd2164ae9b961f60096a23a9b2 271 Pfam PF00005 ABC transporter 31 178 1.8E-32 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_4070 eb15a7bd2164ae9b961f60096a23a9b2 271 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_4070 eb15a7bd2164ae9b961f60096a23a9b2 271 Gene3D G3DSA:3.40.50.300 3 266 2.3E-73 T 18-10-2018 CH53_3460 e8dd18d6b7613809f4c8537d84cefd8f 454 Pfam PF13347 MFS/sugar transport protein 21 432 2.8E-74 T 18-10-2018 CH53_3460 e8dd18d6b7613809f4c8537d84cefd8f 454 SUPERFAMILY SSF103473 15 430 2.53E-25 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_3460 e8dd18d6b7613809f4c8537d84cefd8f 454 Gene3D G3DSA:1.20.1250.20 228 436 2.0E-10 T 18-10-2018 CH53_3460 e8dd18d6b7613809f4c8537d84cefd8f 454 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 20 445 5.7E-107 T 18-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CH53_3460 e8dd18d6b7613809f4c8537d84cefd8f 454 Gene3D G3DSA:1.20.1250.20 13 213 9.9E-11 T 18-10-2018 CH53_3724 2b4ee7870e6c8496b65ddda1ef823894 278 Gene3D G3DSA:2.40.30.10 2 136 3.0E-33 T 18-10-2018 CH53_3724 2b4ee7870e6c8496b65ddda1ef823894 278 Gene3D G3DSA:3.40.50.80 139 277 3.0E-35 T 18-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH53_3724 2b4ee7870e6c8496b65ddda1ef823894 278 SUPERFAMILY SSF63380 9 141 1.17E-14 T 18-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CH53_3724 2b4ee7870e6c8496b65ddda1ef823894 278 Pfam PF04954 Siderophore-interacting protein 146 259 5.1E-32 T 18-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain CH53_3724 2b4ee7870e6c8496b65ddda1ef823894 278 Pfam PF08021 Siderophore-interacting FAD-binding domain 21 136 5.5E-36 T 18-10-2018 IPR013113 FAD-binding 9, siderophore-interacting CH53_140 594d4bd6637b7eddd8d5b0a6354be463 440 Pfam PF17193 MukF C-terminal domain 283 440 4.0E-78 T 18-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain CH53_140 594d4bd6637b7eddd8d5b0a6354be463 440 PIRSF PIRSF018282 1 440 8.1E-247 T 18-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 CH53_140 594d4bd6637b7eddd8d5b0a6354be463 440 Gene3D G3DSA:1.10.10.10 24 118 1.6E-53 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_140 594d4bd6637b7eddd8d5b0a6354be463 440 Pfam PF17192 MukF middle domain 121 281 5.1E-85 T 18-10-2018 IPR033440 Chromosome partition protein MukF, middle domain CH53_140 594d4bd6637b7eddd8d5b0a6354be463 440 Pfam PF03882 MukF winged-helix domain 3 117 1.7E-58 T 18-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain CH53_140 594d4bd6637b7eddd8d5b0a6354be463 440 SUPERFAMILY SSF140570 119 281 1.96E-76 T 18-10-2018 IPR036141 MukF, middle domain superfamily CH53_140 594d4bd6637b7eddd8d5b0a6354be463 440 Gene3D G3DSA:1.10.225.40 353 440 1.5E-41 T 18-10-2018 IPR038198 MukF, C-terminal domain superfamily CH53_140 594d4bd6637b7eddd8d5b0a6354be463 440 SUPERFAMILY SSF46785 8 118 2.0E-50 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_140 594d4bd6637b7eddd8d5b0a6354be463 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 55.309 T 18-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 CH53_140 594d4bd6637b7eddd8d5b0a6354be463 440 Gene3D G3DSA:1.20.58.590 119 311 3.9E-87 T 18-10-2018 IPR036141 MukF, middle domain superfamily CH53_1093 fd52d7b748e4a68804cbe0ad5491f1b4 132 PIRSF PIRSF003196 5 132 7.5E-40 T 18-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 CH53_1093 fd52d7b748e4a68804cbe0ad5491f1b4 132 Gene3D G3DSA:1.10.1270.10 32 131 1.1E-35 T 18-10-2018 IPR038116 TrpR-like superfamily CH53_1093 fd52d7b748e4a68804cbe0ad5491f1b4 132 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 33 124 6.0E-37 T 18-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 CH53_1093 fd52d7b748e4a68804cbe0ad5491f1b4 132 Hamap MF_00475 Trp operon repressor [trpR]. 38 131 23.296 T 18-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 CH53_1093 fd52d7b748e4a68804cbe0ad5491f1b4 132 Pfam PF01371 Trp repressor protein 40 126 3.8E-28 T 18-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 CH53_1093 fd52d7b748e4a68804cbe0ad5491f1b4 132 TIGRFAM TIGR01321 TrpR: trp operon repressor 38 127 1.7E-33 T 18-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 CH53_1093 fd52d7b748e4a68804cbe0ad5491f1b4 132 SUPERFAMILY SSF48295 31 127 1.15E-27 T 18-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CH53_3194 3b09fbda7d1401ef42ca5373c9a76cbc 159 SUPERFAMILY SSF55040 11 155 5.36E-61 T 18-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CH53_3194 3b09fbda7d1401ef42ca5373c9a76cbc 159 Gene3D G3DSA:3.30.70.640 1 159 2.3E-70 T 18-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CH53_3194 3b09fbda7d1401ef42ca5373c9a76cbc 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.154 T 18-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CH53_3194 3b09fbda7d1401ef42ca5373c9a76cbc 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.6E-71 T 18-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CH53_3194 3b09fbda7d1401ef42ca5373c9a76cbc 159 Pfam PF01967 MoaC family 15 150 1.8E-54 T 18-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CH53_649 1f10b431a90d432de435087ff9153f8e 267 Gene3D G3DSA:3.30.540.10 1 140 2.1E-52 T 18-10-2018 CH53_649 1f10b431a90d432de435087ff9153f8e 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 18-10-2018 IPR020583 Inositol monophosphatase, metal-binding site CH53_649 1f10b431a90d432de435087ff9153f8e 267 Gene3D G3DSA:3.40.190.80 142 267 9.3E-41 T 18-10-2018 CH53_649 1f10b431a90d432de435087ff9153f8e 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 8.1E-38 T 18-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CH53_649 1f10b431a90d432de435087ff9153f8e 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 8.1E-38 T 18-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CH53_649 1f10b431a90d432de435087ff9153f8e 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 8.1E-38 T 18-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CH53_649 1f10b431a90d432de435087ff9153f8e 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 8.1E-38 T 18-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CH53_649 1f10b431a90d432de435087ff9153f8e 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 18-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CH53_649 1f10b431a90d432de435087ff9153f8e 267 SUPERFAMILY SSF56655 1 259 8.25E-86 T 18-10-2018 CH53_649 1f10b431a90d432de435087ff9153f8e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.7E-59 T 18-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CH53_649 1f10b431a90d432de435087ff9153f8e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.7E-59 T 18-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CH53_649 1f10b431a90d432de435087ff9153f8e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.7E-59 T 18-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CH53_649 1f10b431a90d432de435087ff9153f8e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.7E-59 T 18-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CH53_649 1f10b431a90d432de435087ff9153f8e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.7E-59 T 18-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CH53_649 1f10b431a90d432de435087ff9153f8e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.7E-59 T 18-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CH53_649 1f10b431a90d432de435087ff9153f8e 267 Pfam PF00459 Inositol monophosphatase family 2 258 1.8E-70 T 18-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CH53_2066 cb263890d743d23ddfe0bdb3159f762c 340 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 1.5E-139 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CH53_2066 cb263890d743d23ddfe0bdb3159f762c 340 SUPERFAMILY SSF51569 7 335 1.13E-143 T 18-10-2018 CH53_2066 cb263890d743d23ddfe0bdb3159f762c 340 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 18-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CH53_2066 cb263890d743d23ddfe0bdb3159f762c 340 PIRSF PIRSF001415 2 336 1.6E-152 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CH53_2066 cb263890d743d23ddfe0bdb3159f762c 340 Gene3D G3DSA:3.20.20.70 3 337 4.4E-146 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2066 cb263890d743d23ddfe0bdb3159f762c 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 3.6E-56 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CH53_2066 cb263890d743d23ddfe0bdb3159f762c 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 3.6E-56 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CH53_2066 cb263890d743d23ddfe0bdb3159f762c 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 3.6E-56 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CH53_2066 cb263890d743d23ddfe0bdb3159f762c 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 3.6E-56 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CH53_2066 cb263890d743d23ddfe0bdb3159f762c 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 3.6E-56 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CH53_2066 cb263890d743d23ddfe0bdb3159f762c 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 3.6E-56 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CH53_2066 cb263890d743d23ddfe0bdb3159f762c 340 SMART SM01004 9 333 4.2E-240 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 318 4.2E-138 T 18-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 Gene3D G3DSA:3.30.470.30 70 253 2.9E-102 T 18-10-2018 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 Pfam PF14520 Helix-hairpin-helix domain 446 502 1.9E-6 T 18-10-2018 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 6.9E-37 T 18-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 664 7.9E-272 T 18-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 SUPERFAMILY SSF50249 318 400 4.11E-30 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 SMART SM00292 594 669 8.6E-13 T 18-10-2018 IPR001357 BRCT domain CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 PIRSF PIRSF001604 1 670 1.4E-259 T 18-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 Gene3D G3DSA:2.20.70.80 391 431 5.5E-22 T 18-10-2018 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 667 1.5E-12 T 18-10-2018 IPR001357 BRCT domain CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 SMART SM00532 3 448 3.2E-288 T 18-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 Pfam PF12826 Helix-hairpin-helix motif 510 573 9.5E-23 T 18-10-2018 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 Gene3D G3DSA:1.10.150.20 506 580 6.0E-28 T 18-10-2018 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 SUPERFAMILY SSF47781 403 578 9.64E-61 T 18-10-2018 IPR010994 RuvA domain 2-like CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 18-10-2018 IPR018239 NAD-dependent DNA ligase, active site CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 2.7E-11 T 18-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 SUPERFAMILY SSF52113 595 668 7.66E-19 T 18-10-2018 IPR036420 BRCT domain superfamily CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 Gene3D G3DSA:3.40.50.10190 581 669 7.2E-27 T 18-10-2018 IPR036420 BRCT domain superfamily CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 Gene3D G3DSA:3.30.1490.70 78 315 2.9E-102 T 18-10-2018 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 Gene3D G3DSA:2.40.50.140 317 390 6.5E-35 T 18-10-2018 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 SMART SM00278 480 499 0.79 T 18-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 SMART SM00278 544 563 42.0 T 18-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 SMART SM00278 512 531 200.0 T 18-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 SMART SM00278 446 465 17.0 T 18-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 Gene3D G3DSA:1.10.150.20 432 505 2.3E-30 T 18-10-2018 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 18-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 SUPERFAMILY SSF56091 2 315 2.72E-123 T 18-10-2018 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 Hamap MF_01588 DNA ligase [ligA]. 2 668 54.571 T 18-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CH53_521 a473b8a12acbddf65975fddfb0ca7dc5 670 Gene3D G3DSA:1.10.287.610 1 69 1.8E-30 T 18-10-2018 CH53_3055 5202717f2e323a1f5d28f2b631b2b683 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 18.724 T 18-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CH53_3055 5202717f2e323a1f5d28f2b631b2b683 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 116 5.0E-24 T 18-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CH53_3055 5202717f2e323a1f5d28f2b631b2b683 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 120 1.7E-36 T 18-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CH53_2644 a17fd1743f464656f9746edfb7f425de 156 SUPERFAMILY SSF46785 6 92 1.81E-17 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2644 a17fd1743f464656f9746edfb7f425de 156 Gene3D G3DSA:1.10.10.10 8 57 2.0E-23 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2644 a17fd1743f464656f9746edfb7f425de 156 Gene3D G3DSA:3.30.70.920 59 143 1.7E-22 T 18-10-2018 CH53_2644 a17fd1743f464656f9746edfb7f425de 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.1E-13 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_2644 a17fd1743f464656f9746edfb7f425de 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.1E-13 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_2644 a17fd1743f464656f9746edfb7f425de 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.1E-13 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_2644 a17fd1743f464656f9746edfb7f425de 156 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 2.0E-18 T 18-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CH53_2644 a17fd1743f464656f9746edfb7f425de 156 SUPERFAMILY SSF54909 66 154 1.88E-16 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_2644 a17fd1743f464656f9746edfb7f425de 156 SMART SM00344 9 115 6.1E-33 T 18-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CH53_2644 a17fd1743f464656f9746edfb7f425de 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 53 2.1E-17 T 18-10-2018 CH53_1994 13e6b30b47f64b4314a7dba31bb65cb2 106 SMART SM01219 1 106 2.1E-56 T 18-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CH53_1994 13e6b30b47f64b4314a7dba31bb65cb2 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 18-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CH53_1994 13e6b30b47f64b4314a7dba31bb65cb2 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 6.6E-43 T 18-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CH53_1994 13e6b30b47f64b4314a7dba31bb65cb2 106 SUPERFAMILY SSF55387 1 105 3.66E-39 T 18-10-2018 CH53_1994 13e6b30b47f64b4314a7dba31bb65cb2 106 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 105 29.274 T 18-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CH53_1994 13e6b30b47f64b4314a7dba31bb65cb2 106 Pfam PF01491 Frataxin-like domain 1 103 3.5E-29 T 18-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CH53_1994 13e6b30b47f64b4314a7dba31bb65cb2 106 Gene3D G3DSA:3.30.920.10 1 106 1.4E-41 T 18-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CH53_1912 8bb0165301563155c4b9afdf5a097612 386 SUPERFAMILY SSF53187 4 384 5.71E-58 T 18-10-2018 CH53_1912 8bb0165301563155c4b9afdf5a097612 386 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 78 87 - T 18-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CH53_1912 8bb0165301563155c4b9afdf5a097612 386 Gene3D G3DSA:3.30.70.360 184 299 7.6E-81 T 18-10-2018 CH53_1912 8bb0165301563155c4b9afdf5a097612 386 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 113 150 - T 18-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CH53_1912 8bb0165301563155c4b9afdf5a097612 386 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 385 65.729 T 18-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 CH53_1912 8bb0165301563155c4b9afdf5a097612 386 Gene3D G3DSA:3.40.630.10 22 367 7.6E-81 T 18-10-2018 CH53_1912 8bb0165301563155c4b9afdf5a097612 386 SUPERFAMILY SSF55031 184 298 6.43E-22 T 18-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CH53_1912 8bb0165301563155c4b9afdf5a097612 386 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 380 3.8E-155 T 18-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 CH53_1912 8bb0165301563155c4b9afdf5a097612 386 Pfam PF07687 Peptidase dimerisation domain 181 289 1.2E-25 T 18-10-2018 IPR011650 Peptidase M20, dimerisation domain CH53_1912 8bb0165301563155c4b9afdf5a097612 386 Pfam PF01546 Peptidase family M20/M25/M40 79 380 2.3E-34 T 18-10-2018 IPR002933 Peptidase M20 GO:0016787 CH53_3325 5796a15086ab2299b672af841fd14d33 468 Gene3D G3DSA:1.20.5.320 436 468 7.9E-22 T 18-10-2018 CH53_3325 5796a15086ab2299b672af841fd14d33 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 18-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CH53_3325 5796a15086ab2299b672af841fd14d33 468 PIRSF PIRSF000109 1 468 8.4E-240 T 18-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CH53_3325 5796a15086ab2299b672af841fd14d33 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 8.5E-52 T 18-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 CH53_3325 5796a15086ab2299b672af841fd14d33 468 SMART SM01350 179 468 4.7E-221 T 18-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CH53_3325 5796a15086ab2299b672af841fd14d33 468 Gene3D G3DSA:3.40.50.720 1 180 5.3E-57 T 18-10-2018 CH53_3325 5796a15086ab2299b672af841fd14d33 468 SUPERFAMILY SSF48179 177 467 1.15E-130 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_3325 5796a15086ab2299b672af841fd14d33 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 1.5E-89 T 18-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CH53_3325 5796a15086ab2299b672af841fd14d33 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 18-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CH53_3325 5796a15086ab2299b672af841fd14d33 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.5E-89 T 18-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CH53_3325 5796a15086ab2299b672af841fd14d33 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 18-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CH53_3325 5796a15086ab2299b672af841fd14d33 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.5E-89 T 18-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CH53_3325 5796a15086ab2299b672af841fd14d33 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 18-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CH53_3325 5796a15086ab2299b672af841fd14d33 468 SUPERFAMILY SSF51735 4 172 3.26E-51 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3325 5796a15086ab2299b672af841fd14d33 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 7.5E-227 T 18-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CH53_3325 5796a15086ab2299b672af841fd14d33 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 467 1.2E-132 T 18-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CH53_3325 5796a15086ab2299b672af841fd14d33 468 Gene3D G3DSA:1.10.1040.10 181 435 3.3E-110 T 18-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 SUPERFAMILY SSF47384 564 642 1.8E-17 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 SUPERFAMILY SSF53850 289 513 2.4E-28 T 18-10-2018 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 Gene3D G3DSA:1.10.287.130 549 639 4.1E-20 T 18-10-2018 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 268 3.1E-10 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 Gene3D G3DSA:3.40.50.2300 823 951 2.8E-23 T 18-10-2018 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 SUPERFAMILY SSF47226 926 1053 7.21E-10 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 SUPERFAMILY SSF55874 630 800 7.07E-40 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 SMART SM00448 827 943 5.1E-17 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 SMART SM00062 297 514 3.1E-8 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 SMART SM00062 54 272 0.0065 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 689 800 1.4E-26 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 Gene3D G3DSA:3.40.190.10 382 473 1.1E-39 T 18-10-2018 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 Gene3D G3DSA:3.40.190.10 138 231 6.3E-31 T 18-10-2018 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 Pfam PF00072 Response regulator receiver domain 829 940 4.7E-17 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 Gene3D G3DSA:3.40.190.10 287 510 1.1E-39 T 18-10-2018 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 Pfam PF00512 His Kinase A (phospho-acceptor) domain 578 641 6.3E-15 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 SMART SM00388 578 641 6.9E-17 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 SMART SM00387 688 804 1.9E-33 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 301 511 4.1E-21 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 Gene3D G3DSA:3.30.565.10 640 808 1.6E-42 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 Gene3D G3DSA:3.40.190.10 52 268 6.3E-31 T 18-10-2018 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 SUPERFAMILY SSF53850 54 268 1.24E-18 T 18-10-2018 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 PRINTS PR00344 Bacterial sensor protein C-terminal signature 788 801 1.6E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 PRINTS PR00344 Bacterial sensor protein C-terminal signature 764 782 1.6E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 PRINTS PR00344 Bacterial sensor protein C-terminal signature 747 757 1.6E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 PRINTS PR00344 Bacterial sensor protein C-terminal signature 729 743 1.6E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3165 531b9333e4cfa0f3adb0118683862410 1064 SUPERFAMILY SSF52172 825 944 5.27E-24 T 18-10-2018 IPR011006 CheY-like superfamily CH53_2642 3e1f1c303379bbd6016b1c9bf7b54153 171 Gene3D G3DSA:1.20.120.450 1 171 2.1E-63 T 18-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes CH53_2642 3e1f1c303379bbd6016b1c9bf7b54153 171 PIRSF PIRSF031551 1 170 3.2E-57 T 18-10-2018 IPR012550 Protein of unknown function DUF1706 CH53_2642 3e1f1c303379bbd6016b1c9bf7b54153 171 Pfam PF08020 Protein of unknown function (DUF1706) 1 165 2.3E-53 T 18-10-2018 IPR012550 Protein of unknown function DUF1706 CH53_2968 1d4ebc1214894907f6637525868c0274 455 Pfam PF07690 Major Facilitator Superfamily 16 406 1.2E-52 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_2968 1d4ebc1214894907f6637525868c0274 455 Gene3D G3DSA:1.20.1720.10 11 258 4.2E-47 T 18-10-2018 CH53_2968 1d4ebc1214894907f6637525868c0274 455 Gene3D G3DSA:1.20.1250.20 259 454 1.3E-17 T 18-10-2018 CH53_2968 1d4ebc1214894907f6637525868c0274 455 SUPERFAMILY SSF103473 4 453 2.22E-70 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_2968 1d4ebc1214894907f6637525868c0274 455 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 12 412 4.9E-69 T 18-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CH53_2225 7a51ba16f24a4b662340c55d6f536d35 370 SUPERFAMILY SSF53383 7 366 1.07E-35 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_2225 7a51ba16f24a4b662340c55d6f536d35 370 Gene3D G3DSA:3.40.640.10 23 277 2.4E-51 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_2225 7a51ba16f24a4b662340c55d6f536d35 370 Pfam PF03841 L-seryl-tRNA selenium transferase 14 270 6.0E-13 T 18-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CH53_2225 7a51ba16f24a4b662340c55d6f536d35 370 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 4 366 9.5E-180 T 18-10-2018 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 CH53_1487 ad5bfbd7ce807949d0221ae7e1716ac9 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 1.7E-74 T 18-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1487 ad5bfbd7ce807949d0221ae7e1716ac9 201 SUPERFAMILY SSF52166 9 200 5.49E-73 T 18-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 CH53_1487 ad5bfbd7ce807949d0221ae7e1716ac9 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 4.1E-64 T 18-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CH53_1487 ad5bfbd7ce807949d0221ae7e1716ac9 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 34.027 T 18-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1487 ad5bfbd7ce807949d0221ae7e1716ac9 201 Gene3D G3DSA:3.40.1370.10 1 201 9.2E-69 T 18-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 CH53_1908 86fcf371fd65e8903cbaadf3deda8a2a 811 ProSitePatterns PS00324 Aspartokinase signature. 15 23 - T 18-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CH53_1908 86fcf371fd65e8903cbaadf3deda8a2a 811 Gene3D G3DSA:3.30.70.260 376 389 3.7E-5 T 18-10-2018 CH53_1908 86fcf371fd65e8903cbaadf3deda8a2a 811 Gene3D G3DSA:1.20.120.1320 52 146 1.2E-72 T 18-10-2018 CH53_1908 86fcf371fd65e8903cbaadf3deda8a2a 811 PIRSF PIRSF000727 13 811 7.1E-290 T 18-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CH53_1908 86fcf371fd65e8903cbaadf3deda8a2a 811 Pfam PF00742 Homoserine dehydrogenase 609 804 3.2E-43 T 18-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CH53_1908 86fcf371fd65e8903cbaadf3deda8a2a 811 Gene3D G3DSA:3.40.50.720 461 807 2.2E-104 T 18-10-2018 CH53_1908 86fcf371fd65e8903cbaadf3deda8a2a 811 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 655 677 - T 18-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CH53_1908 86fcf371fd65e8903cbaadf3deda8a2a 811 SUPERFAMILY SSF53633 13 300 1.23E-56 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CH53_1908 86fcf371fd65e8903cbaadf3deda8a2a 811 SUPERFAMILY SSF55347 609 792 1.05E-46 T 18-10-2018 CH53_1908 86fcf371fd65e8903cbaadf3deda8a2a 811 Gene3D G3DSA:3.30.360.10 620 790 2.2E-104 T 18-10-2018 CH53_1908 86fcf371fd65e8903cbaadf3deda8a2a 811 SUPERFAMILY SSF51735 458 631 1.86E-31 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1908 86fcf371fd65e8903cbaadf3deda8a2a 811 Gene3D G3DSA:3.40.1160.10 16 299 1.2E-72 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CH53_1908 86fcf371fd65e8903cbaadf3deda8a2a 811 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 466 601 4.0E-22 T 18-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CH53_1908 86fcf371fd65e8903cbaadf3deda8a2a 811 Gene3D G3DSA:3.30.70.260 390 453 3.7E-5 T 18-10-2018 CH53_1908 86fcf371fd65e8903cbaadf3deda8a2a 811 Pfam PF00696 Amino acid kinase family 13 285 7.1E-41 T 18-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CH53_250 4a4589e610df977a53eea871e49aa97e 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 2.2E-97 T 18-10-2018 IPR011897 Translation elongation factor P-like, YeiP CH53_250 4a4589e610df977a53eea871e49aa97e 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 42.834 T 18-10-2018 IPR011897 Translation elongation factor P-like, YeiP CH53_250 4a4589e610df977a53eea871e49aa97e 190 Gene3D G3DSA:2.30.30.30 1 65 2.9E-14 T 18-10-2018 IPR014722 Ribosomal protein L2, domain 2 CH53_250 4a4589e610df977a53eea871e49aa97e 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 1.7E-17 T 18-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CH53_250 4a4589e610df977a53eea871e49aa97e 190 SMART SM00841 133 188 1.2E-23 T 18-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CH53_250 4a4589e610df977a53eea871e49aa97e 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 1.2E-13 T 18-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CH53_250 4a4589e610df977a53eea871e49aa97e 190 SUPERFAMILY SSF50249 132 189 3.2E-14 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_250 4a4589e610df977a53eea871e49aa97e 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 18-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site CH53_250 4a4589e610df977a53eea871e49aa97e 190 SUPERFAMILY SSF50104 1 64 4.63E-10 T 18-10-2018 IPR008991 Translation protein SH3-like domain superfamily CH53_250 4a4589e610df977a53eea871e49aa97e 190 SUPERFAMILY SSF50249 67 130 4.71E-11 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_250 4a4589e610df977a53eea871e49aa97e 190 SMART SM01185 69 125 7.3E-14 T 18-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CH53_250 4a4589e610df977a53eea871e49aa97e 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 61 1.0E-15 T 18-10-2018 IPR013185 Translation elongation factor, KOW-like CH53_250 4a4589e610df977a53eea871e49aa97e 190 PIRSF PIRSF005901 1 190 1.8E-59 T 18-10-2018 IPR020599 Translation elongation factor P/YeiP CH53_250 4a4589e610df977a53eea871e49aa97e 190 Gene3D G3DSA:2.40.50.140 132 189 2.3E-19 T 18-10-2018 CH53_250 4a4589e610df977a53eea871e49aa97e 190 Gene3D G3DSA:2.40.50.140 66 130 2.2E-15 T 18-10-2018 CH53_2287 3459ecbf2527fccf945286c368ee1405 332 Gene3D G3DSA:3.40.30.130 21 317 5.7E-137 T 18-10-2018 CH53_2287 3459ecbf2527fccf945286c368ee1405 332 PIRSF PIRSF015753 5 324 2.2E-132 T 18-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 CH53_2287 3459ecbf2527fccf945286c368ee1405 332 SUPERFAMILY SSF52833 42 162 3.28E-14 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_2287 3459ecbf2527fccf945286c368ee1405 332 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 1.6E-23 T 18-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CH53_2287 3459ecbf2527fccf945286c368ee1405 332 SUPERFAMILY SSF47616 176 325 9.19E-33 T 18-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CH53_2287 3459ecbf2527fccf945286c368ee1405 332 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 256 2.9E-11 T 18-10-2018 CH53_2287 3459ecbf2527fccf945286c368ee1405 332 Gene3D G3DSA:1.20.1050.10 174 284 5.7E-137 T 18-10-2018 CH53_2212 612d23c2902de3596f1574bd4a89dede 474 Gene3D G3DSA:3.40.309.10 249 438 2.2E-181 T 18-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CH53_2212 612d23c2902de3596f1574bd4a89dede 474 Pfam PF00171 Aldehyde dehydrogenase family 12 468 4.9E-171 T 18-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CH53_2212 612d23c2902de3596f1574bd4a89dede 474 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 18-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CH53_2212 612d23c2902de3596f1574bd4a89dede 474 SUPERFAMILY SSF53720 2 472 4.06E-169 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CH53_2212 612d23c2902de3596f1574bd4a89dede 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 18-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CH53_2212 612d23c2902de3596f1574bd4a89dede 474 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 21 467 1.7E-205 T 18-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CH53_2212 612d23c2902de3596f1574bd4a89dede 474 Gene3D G3DSA:3.40.605.10 16 463 2.2E-181 T 18-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CH53_2827 661a899135b89c293a2337426cc73338 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.2E-15 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2827 661a899135b89c293a2337426cc73338 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 3.2E-15 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2827 661a899135b89c293a2337426cc73338 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 3.2E-15 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2827 661a899135b89c293a2337426cc73338 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 3.2E-15 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2827 661a899135b89c293a2337426cc73338 226 Gene3D G3DSA:3.40.50.720 2 226 3.0E-54 T 18-10-2018 CH53_2827 661a899135b89c293a2337426cc73338 226 Pfam PF00106 short chain dehydrogenase 8 187 3.5E-29 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2827 661a899135b89c293a2337426cc73338 226 SUPERFAMILY SSF51735 7 226 2.1E-63 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_125 75d3107af73af3cee071d465e51e136a 706 SUPERFAMILY SSF53335 396 701 2.53E-67 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_125 75d3107af73af3cee071d465e51e136a 706 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 18-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CH53_125 75d3107af73af3cee071d465e51e136a 706 Gene3D G3DSA:3.40.50.150 484 702 6.6E-74 T 18-10-2018 CH53_125 75d3107af73af3cee071d465e51e136a 706 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 18-10-2018 IPR000241 Putative RNA methylase domain CH53_125 75d3107af73af3cee071d465e51e136a 706 PIRSF PIRSF037618 1 703 6.6E-296 T 18-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 CH53_125 75d3107af73af3cee071d465e51e136a 706 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 702 32.254 T 18-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 CH53_125 75d3107af73af3cee071d465e51e136a 706 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 3.4E-62 T 18-10-2018 IPR000241 Putative RNA methylase domain CH53_125 75d3107af73af3cee071d465e51e136a 706 SMART SM00981 56 154 4.0E-19 T 18-10-2018 IPR004114 THUMP domain GO:0003723 CH53_125 75d3107af73af3cee071d465e51e136a 706 Gene3D G3DSA:3.40.50.150 169 372 6.6E-146 T 18-10-2018 CH53_125 75d3107af73af3cee071d465e51e136a 706 Gene3D G3DSA:3.30.750.80 392 483 5.3E-36 T 18-10-2018 CH53_125 75d3107af73af3cee071d465e51e136a 706 Pfam PF02926 THUMP domain 23 152 8.7E-16 T 18-10-2018 IPR004114 THUMP domain GO:0003723 CH53_125 75d3107af73af3cee071d465e51e136a 706 Gene3D G3DSA:3.30.2130.30 5 255 6.6E-146 T 18-10-2018 CH53_125 75d3107af73af3cee071d465e51e136a 706 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 438 663 1.3E-19 T 18-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CH53_125 75d3107af73af3cee071d465e51e136a 706 SUPERFAMILY SSF53335 146 373 6.64E-40 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_1049 de5795c9e90dcce1d14de9a232bd5016 255 Pfam PF09335 SNARE associated Golgi protein 36 159 2.3E-21 T 18-10-2018 IPR032816 SNARE associated Golgi protein CH53_238 b56cca7d4029e4664a1a956134dc3601 269 Pfam PF00455 DeoR C terminal sensor domain 89 247 3.1E-56 T 18-10-2018 IPR014036 DeoR C-terminal sensor domain CH53_238 b56cca7d4029e4664a1a956134dc3601 269 SMART SM00420 18 70 6.9E-21 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_238 b56cca7d4029e4664a1a956134dc3601 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 18 52 - T 18-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CH53_238 b56cca7d4029e4664a1a956134dc3601 269 SUPERFAMILY SSF46785 16 70 4.62E-13 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_238 b56cca7d4029e4664a1a956134dc3601 269 Gene3D G3DSA:1.10.10.10 3 67 2.1E-9 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_238 b56cca7d4029e4664a1a956134dc3601 269 SMART SM01134 87 248 2.5E-72 T 18-10-2018 CH53_238 b56cca7d4029e4664a1a956134dc3601 269 Pfam PF08220 DeoR-like helix-turn-helix domain 18 72 1.8E-19 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_238 b56cca7d4029e4664a1a956134dc3601 269 SUPERFAMILY SSF100950 89 250 4.88E-34 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_3034 0cfa69e59e4b1017e1462544886047ca 127 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 101 1.7E-37 T 18-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CH53_3034 0cfa69e59e4b1017e1462544886047ca 127 SUPERFAMILY SSF63592 1 98 1.12E-34 T 18-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily CH53_3034 0cfa69e59e4b1017e1462544886047ca 127 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 98 3.0E-35 T 18-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CH53_3034 0cfa69e59e4b1017e1462544886047ca 127 Gene3D G3DSA:1.10.4000.10 1 116 7.5E-41 T 18-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily CH53_3034 0cfa69e59e4b1017e1462544886047ca 127 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 27.07 T 18-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CH53_849 8605f2188e7db6964148a28e9c9cd876 269 SMART SM01134 90 250 8.1E-63 T 18-10-2018 CH53_849 8605f2188e7db6964148a28e9c9cd876 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.7E-6 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_849 8605f2188e7db6964148a28e9c9cd876 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.7E-6 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_849 8605f2188e7db6964148a28e9c9cd876 269 SMART SM00420 6 58 5.7E-13 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_849 8605f2188e7db6964148a28e9c9cd876 269 SUPERFAMILY SSF46785 5 59 2.0E-7 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_849 8605f2188e7db6964148a28e9c9cd876 269 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 7.3E-14 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_849 8605f2188e7db6964148a28e9c9cd876 269 SUPERFAMILY SSF100950 93 249 3.56E-29 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_849 8605f2188e7db6964148a28e9c9cd876 269 Pfam PF00455 DeoR C terminal sensor domain 92 248 4.8E-50 T 18-10-2018 IPR014036 DeoR C-terminal sensor domain CH53_849 8605f2188e7db6964148a28e9c9cd876 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 18-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CH53_1290 be910ab101c2a0f2c418bf91411b6d79 158 SUPERFAMILY SSF54534 81 157 1.83E-24 T 18-10-2018 CH53_1290 be910ab101c2a0f2c418bf91411b6d79 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 18-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CH53_1290 be910ab101c2a0f2c418bf91411b6d79 158 Gene3D G3DSA:1.10.287.180 1 75 6.0E-33 T 18-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CH53_1290 be910ab101c2a0f2c418bf91411b6d79 158 SUPERFAMILY SSF46557 2 76 3.92E-29 T 18-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CH53_1290 be910ab101c2a0f2c418bf91411b6d79 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 18-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CH53_1290 be910ab101c2a0f2c418bf91411b6d79 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 1.6E-31 T 18-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CH53_1290 be910ab101c2a0f2c418bf91411b6d79 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.175 T 18-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CH53_1290 be910ab101c2a0f2c418bf91411b6d79 158 PIRSF PIRSF006092 1 158 1.2E-54 T 18-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CH53_1290 be910ab101c2a0f2c418bf91411b6d79 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 2.1E-28 T 18-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CH53_1290 be910ab101c2a0f2c418bf91411b6d79 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 3.8E-59 T 18-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CH53_1290 be910ab101c2a0f2c418bf91411b6d79 158 Gene3D G3DSA:3.10.50.30 76 158 1.3E-32 T 18-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 CH53_679 3304fce0ea5e1646173b418876590c1b 284 Hamap MF_00367 GTPase Era [era]. 1 279 31.057 T 18-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_679 3304fce0ea5e1646173b418876590c1b 284 SUPERFAMILY SSF52540 1 187 1.68E-36 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_679 3304fce0ea5e1646173b418876590c1b 284 Gene3D G3DSA:3.40.50.300 1 166 7.3E-44 T 18-10-2018 CH53_679 3304fce0ea5e1646173b418876590c1b 284 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 152 3.6E-35 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CH53_679 3304fce0ea5e1646173b418876590c1b 284 Gene3D G3DSA:3.30.300.20 168 284 1.1E-43 T 18-10-2018 IPR015946 K homology domain-like, alpha/beta CH53_679 3304fce0ea5e1646173b418876590c1b 284 Pfam PF07650 KH domain 191 267 2.0E-19 T 18-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_679 3304fce0ea5e1646173b418876590c1b 284 TIGRFAM TIGR00436 era: GTP-binding protein Era 1 262 1.5E-109 T 18-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_679 3304fce0ea5e1646173b418876590c1b 284 Pfam PF01926 50S ribosome-binding GTPase 1 107 2.6E-16 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_679 3304fce0ea5e1646173b418876590c1b 284 SUPERFAMILY SSF54814 164 279 1.24E-42 T 18-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CH53_3221 0c33312caf99efb3bf580d1bfe10d9ab 278 SUPERFAMILY SSF52540 36 276 3.66E-56 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3221 0c33312caf99efb3bf580d1bfe10d9ab 278 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 255 277 6.3E-9 T 18-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CH53_3221 0c33312caf99efb3bf580d1bfe10d9ab 278 Pfam PF00005 ABC transporter 53 207 2.7E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3221 0c33312caf99efb3bf580d1bfe10d9ab 278 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 37 278 3.4E-112 T 18-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD CH53_3221 0c33312caf99efb3bf580d1bfe10d9ab 278 Gene3D G3DSA:3.40.50.300 22 276 7.8E-56 T 18-10-2018 CH53_2151 e176c7fcb04fe06d6f9053cbcf1d5ffd 202 Gene3D G3DSA:1.10.10.10 1 70 3.2E-29 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2151 e176c7fcb04fe06d6f9053cbcf1d5ffd 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 1.0E-83 T 18-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CH53_2151 e176c7fcb04fe06d6f9053cbcf1d5ffd 202 Pfam PF01726 LexA DNA binding domain 1 65 2.5E-29 T 18-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CH53_2151 e176c7fcb04fe06d6f9053cbcf1d5ffd 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.428 T 18-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CH53_2151 e176c7fcb04fe06d6f9053cbcf1d5ffd 202 SUPERFAMILY SSF51306 76 198 2.96E-38 T 18-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CH53_2151 e176c7fcb04fe06d6f9053cbcf1d5ffd 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 7.4E-14 T 18-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CH53_2151 e176c7fcb04fe06d6f9053cbcf1d5ffd 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 7.4E-14 T 18-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CH53_2151 e176c7fcb04fe06d6f9053cbcf1d5ffd 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 7.4E-14 T 18-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CH53_2151 e176c7fcb04fe06d6f9053cbcf1d5ffd 202 Pfam PF00717 Peptidase S24-like 114 179 5.7E-15 T 18-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CH53_2151 e176c7fcb04fe06d6f9053cbcf1d5ffd 202 Gene3D G3DSA:2.10.109.10 80 202 7.7E-47 T 18-10-2018 CH53_2151 e176c7fcb04fe06d6f9053cbcf1d5ffd 202 SUPERFAMILY SSF46785 3 69 6.67E-20 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1682 419f23cd4e62d581f3152f1a362f935c 275 SUPERFAMILY SSF53927 24 273 1.23E-79 T 18-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CH53_1682 419f23cd4e62d581f3152f1a362f935c 275 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 35 275 1.7E-89 T 18-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CH53_1682 419f23cd4e62d581f3152f1a362f935c 275 Pfam PF02634 FdhD/NarQ family 38 273 2.3E-72 T 18-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CH53_1682 419f23cd4e62d581f3152f1a362f935c 275 Gene3D G3DSA:3.40.140.10 127 275 1.3E-45 T 18-10-2018 CH53_1682 419f23cd4e62d581f3152f1a362f935c 275 Gene3D G3DSA:3.10.20.10 40 125 2.5E-10 T 18-10-2018 CH53_1682 419f23cd4e62d581f3152f1a362f935c 275 PIRSF PIRSF015626 8 275 3.6E-78 T 18-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CH53_1682 419f23cd4e62d581f3152f1a362f935c 275 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 13 274 32.792 T 18-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CH53_2894 e7bf8edefb7d4e2d20b359c76e9a299b 1133 SUPERFAMILY SSF82689 993 1093 5.23E-26 T 18-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CH53_2894 e7bf8edefb7d4e2d20b359c76e9a299b 1133 Gene3D G3DSA:3.30.70.100 994 1087 1.3E-19 T 18-10-2018 CH53_2894 e7bf8edefb7d4e2d20b359c76e9a299b 1133 Pfam PF00924 Mechanosensitive ion channel 883 1082 1.7E-57 T 18-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CH53_2894 e7bf8edefb7d4e2d20b359c76e9a299b 1133 Pfam PF12795 Mechanosensitive ion channel porin domain 46 284 1.1E-60 T 18-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain CH53_2894 e7bf8edefb7d4e2d20b359c76e9a299b 1133 SUPERFAMILY SSF50182 926 991 3.6E-16 T 18-10-2018 IPR010920 LSM domain superfamily CH53_2894 e7bf8edefb7d4e2d20b359c76e9a299b 1133 SUPERFAMILY SSF82861 841 924 1.96E-8 T 18-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CH53_2894 e7bf8edefb7d4e2d20b359c76e9a299b 1133 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 504 822 7.3E-101 T 18-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CH53_2894 e7bf8edefb7d4e2d20b359c76e9a299b 1133 Gene3D G3DSA:2.30.30.60 941 990 1.8E-12 T 18-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily CH53_267 5499020114dd6638aea3ca65f415d4b4 585 SMART SM00490 263 345 5.5E-9 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_267 5499020114dd6638aea3ca65f415d4b4 585 SUPERFAMILY SSF52540 50 358 3.14E-37 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_267 5499020114dd6638aea3ca65f415d4b4 585 Gene3D G3DSA:3.40.50.300 186 376 5.5E-34 T 18-10-2018 CH53_267 5499020114dd6638aea3ca65f415d4b4 585 Gene3D G3DSA:3.40.50.300 1 169 6.4E-30 T 18-10-2018 CH53_267 5499020114dd6638aea3ca65f415d4b4 585 Pfam PF00271 Helicase conserved C-terminal domain 243 343 2.3E-12 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_267 5499020114dd6638aea3ca65f415d4b4 585 SUPERFAMILY SSF57829 424 467 1.83E-7 T 18-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CH53_267 5499020114dd6638aea3ca65f415d4b4 585 SMART SM00487 1 185 6.1E-18 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH53_267 5499020114dd6638aea3ca65f415d4b4 585 Pfam PF04851 Type III restriction enzyme, res subunit 3 155 4.4E-25 T 18-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CH53_3786 5755c38b5340c5fecb37cc2dc8a6f38a 307 SUPERFAMILY SSF51735 3 136 9.11E-43 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3786 5755c38b5340c5fecb37cc2dc8a6f38a 307 Gene3D G3DSA:3.40.50.720 1 120 2.6E-32 T 18-10-2018 CH53_3786 5755c38b5340c5fecb37cc2dc8a6f38a 307 Gene3D G3DSA:3.30.360.10 121 307 6.7E-58 T 18-10-2018 CH53_3786 5755c38b5340c5fecb37cc2dc8a6f38a 307 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 2.7E-26 T 18-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CH53_3786 5755c38b5340c5fecb37cc2dc8a6f38a 307 SUPERFAMILY SSF55347 123 264 3.71E-45 T 18-10-2018 CH53_3184 7af75378fea3a6cd1b2199923b0cd1ce 350 Pfam PF04055 Radical SAM superfamily 50 202 9.7E-17 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_3184 7af75378fea3a6cd1b2199923b0cd1ce 350 SMART SM00729 43 255 2.1E-40 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CH53_3184 7af75378fea3a6cd1b2199923b0cd1ce 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 2.7E-20 T 18-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CH53_3184 7af75378fea3a6cd1b2199923b0cd1ce 350 SUPERFAMILY SSF102114 6 313 4.05E-94 T 18-10-2018 CH53_3184 7af75378fea3a6cd1b2199923b0cd1ce 350 SMART SM00876 220 312 2.5E-49 T 18-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CH53_3184 7af75378fea3a6cd1b2199923b0cd1ce 350 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 2.6E-125 T 18-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CH53_3184 7af75378fea3a6cd1b2199923b0cd1ce 350 PIRSF PIRSF001619 1 319 1.1E-138 T 18-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CH53_3184 7af75378fea3a6cd1b2199923b0cd1ce 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.306 T 18-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CH53_3184 7af75378fea3a6cd1b2199923b0cd1ce 350 Gene3D G3DSA:3.20.20.70 5 315 2.1E-135 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_4376 22266d7a4219e6190d6294dd1e1f8ea3 139 SUPERFAMILY SSF55729 31 137 6.75E-22 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_4376 22266d7a4219e6190d6294dd1e1f8ea3 139 Gene3D G3DSA:3.40.630.30 35 137 6.4E-22 T 18-10-2018 CH53_4376 22266d7a4219e6190d6294dd1e1f8ea3 139 Pfam PF00583 Acetyltransferase (GNAT) family 42 115 9.1E-12 T 18-10-2018 IPR000182 GNAT domain CH53_1865 6de5eadaa52ec8bd6214538f1752b877 321 Gene3D G3DSA:3.40.50.2000 164 320 4.0E-55 T 18-10-2018 CH53_1865 6de5eadaa52ec8bd6214538f1752b877 321 Gene3D G3DSA:3.40.50.2000 1 163 6.2E-63 T 18-10-2018 CH53_1865 6de5eadaa52ec8bd6214538f1752b877 321 SUPERFAMILY SSF53756 1 320 9.63E-77 T 18-10-2018 CH53_1865 6de5eadaa52ec8bd6214538f1752b877 321 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 319 7.5E-126 T 18-10-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 CH53_1865 6de5eadaa52ec8bd6214538f1752b877 321 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 312 4.7E-69 T 18-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 CH53_1310 4ee1dbee7d030d6681f8ac84ad48b117 118 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 1.0E-21 T 18-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like CH53_1310 4ee1dbee7d030d6681f8ac84ad48b117 118 SUPERFAMILY SSF110857 1 115 8.5E-34 T 18-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily CH53_1310 4ee1dbee7d030d6681f8ac84ad48b117 118 Gene3D G3DSA:3.10.490.10 1 117 4.5E-40 T 18-10-2018 CH53_3253 5d0f42bb1f780e7df735fcb9775cbb5f 251 Gene3D G3DSA:3.40.50.720 5 251 9.7E-86 T 18-10-2018 CH53_3253 5d0f42bb1f780e7df735fcb9775cbb5f 251 SUPERFAMILY SSF69572 4 249 5.1E-83 T 18-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CH53_3253 5d0f42bb1f780e7df735fcb9775cbb5f 251 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 10 248 1.5E-120 T 18-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 CH53_3253 5d0f42bb1f780e7df735fcb9775cbb5f 251 Pfam PF00899 ThiF family 13 245 9.5E-61 T 18-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CH53_4022 ab7a5ad8d400612fabb1f86ba30e1eaf 172 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 9 83 4.4E-10 T 18-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CH53_4022 ab7a5ad8d400612fabb1f86ba30e1eaf 172 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 21 167 40.803 T 18-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 CH53_4022 ab7a5ad8d400612fabb1f86ba30e1eaf 172 SUPERFAMILY SSF53155 7 92 1.14E-5 T 18-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CH53_4022 ab7a5ad8d400612fabb1f86ba30e1eaf 172 SUPERFAMILY SSF46767 86 169 5.49E-34 T 18-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 CH53_4022 ab7a5ad8d400612fabb1f86ba30e1eaf 172 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 18-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CH53_4022 ab7a5ad8d400612fabb1f86ba30e1eaf 172 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 3.0E-34 T 18-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CH53_4022 ab7a5ad8d400612fabb1f86ba30e1eaf 172 Gene3D G3DSA:1.10.10.10 86 169 8.1E-37 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4022 ab7a5ad8d400612fabb1f86ba30e1eaf 172 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 7.9E-38 T 18-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CH53_59 dd71cb50085c8cb365e18e5b8ead4cab 421 Gene3D G3DSA:3.90.1700.10 250 418 4.6E-70 T 18-10-2018 CH53_59 dd71cb50085c8cb365e18e5b8ead4cab 421 Gene3D G3DSA:3.90.1710.10 108 243 8.3E-76 T 18-10-2018 CH53_59 dd71cb50085c8cb365e18e5b8ead4cab 421 Pfam PF06545 Protein of unknown function (DUF1116) 87 302 8.6E-98 T 18-10-2018 IPR009499 Protein of unknown function DUF1116 CH53_59 dd71cb50085c8cb365e18e5b8ead4cab 421 Gene3D G3DSA:1.10.10.660 42 107 8.3E-76 T 18-10-2018 IPR024033 Uncharacterised domain superfamily, YlbE CH53_3584 fd38a51396af61bc1435668276add521 201 Gene3D G3DSA:1.10.340.30 35 146 3.4E-64 T 18-10-2018 CH53_3584 fd38a51396af61bc1435668276add521 201 Gene3D G3DSA:1.10.1670.40 7 195 3.4E-64 T 18-10-2018 CH53_3584 fd38a51396af61bc1435668276add521 201 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 44 181 1.1E-12 T 18-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CH53_3584 fd38a51396af61bc1435668276add521 201 SUPERFAMILY SSF48150 35 198 4.01E-34 T 18-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CH53_3584 fd38a51396af61bc1435668276add521 201 SMART SM00478 49 201 3.2E-5 T 18-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CH53_753 c9e3d4b0dd9520cdb668ad5854d1d537 693 Gene3D G3DSA:1.10.1650.20 273 324 4.7E-28 T 18-10-2018 CH53_753 c9e3d4b0dd9520cdb668ad5854d1d537 693 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 1 693 0.0 T 18-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CH53_753 c9e3d4b0dd9520cdb668ad5854d1d537 693 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 78 150 1.5E-11 T 18-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_753 c9e3d4b0dd9520cdb668ad5854d1d537 693 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 545 567 - T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_753 c9e3d4b0dd9520cdb668ad5854d1d537 693 Pfam PF08343 Ribonucleotide reductase N-terminal 1 76 1.9E-29 T 18-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CH53_753 c9e3d4b0dd9520cdb668ad5854d1d537 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 230 249 3.5E-33 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_753 c9e3d4b0dd9520cdb668ad5854d1d537 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 472 495 3.5E-33 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_753 c9e3d4b0dd9520cdb668ad5854d1d537 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 556 583 3.5E-33 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_753 c9e3d4b0dd9520cdb668ad5854d1d537 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 405 428 3.5E-33 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_753 c9e3d4b0dd9520cdb668ad5854d1d537 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 361 372 3.5E-33 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_753 c9e3d4b0dd9520cdb668ad5854d1d537 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 444 466 3.5E-33 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_753 c9e3d4b0dd9520cdb668ad5854d1d537 693 SUPERFAMILY SSF48168 1 153 1.15E-59 T 18-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_753 c9e3d4b0dd9520cdb668ad5854d1d537 693 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 82 675 1.2E-159 T 18-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_753 c9e3d4b0dd9520cdb668ad5854d1d537 693 SUPERFAMILY SSF51998 154 677 6.41E-187 T 18-10-2018 CH53_753 c9e3d4b0dd9520cdb668ad5854d1d537 693 Pfam PF02867 Ribonucleotide reductase, barrel domain 155 672 2.5E-142 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_204 2d5a1a5dc557e97e563c5587e5264c2b 377 SUPERFAMILY SSF52540 19 257 2.53E-88 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_204 2d5a1a5dc557e97e563c5587e5264c2b 377 Gene3D G3DSA:2.40.50.940 239 301 1.0E-10 T 18-10-2018 CH53_204 2d5a1a5dc557e97e563c5587e5264c2b 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 6.2E-147 T 18-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 CH53_204 2d5a1a5dc557e97e563c5587e5264c2b 377 Gene3D G3DSA:2.40.50.140 302 356 1.0E-10 T 18-10-2018 CH53_204 2d5a1a5dc557e97e563c5587e5264c2b 377 Gene3D G3DSA:3.40.50.300 19 238 2.2E-70 T 18-10-2018 CH53_204 2d5a1a5dc557e97e563c5587e5264c2b 377 Pfam PF00005 ABC transporter 36 177 1.0E-38 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_204 2d5a1a5dc557e97e563c5587e5264c2b 377 Pfam PF08402 TOBE domain 295 375 2.8E-20 T 18-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 CH53_204 2d5a1a5dc557e97e563c5587e5264c2b 377 SUPERFAMILY SSF50331 252 375 3.03E-17 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CH53_204 2d5a1a5dc557e97e563c5587e5264c2b 377 SMART SM00382 44 227 1.7E-18 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_204 2d5a1a5dc557e97e563c5587e5264c2b 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3971 641784a86740d590f0f8b69113e78175 121 Pfam PF06932 Protein of unknown function (DUF1283) 39 121 4.8E-40 T 18-10-2018 IPR009700 Protein of unknown function DUF1283 CH53_3971 641784a86740d590f0f8b69113e78175 121 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 27 121 3.0E-42 T 18-10-2018 IPR009700 Protein of unknown function DUF1283 CH53_3971 641784a86740d590f0f8b69113e78175 121 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 1 121 29.723 T 18-10-2018 IPR009700 Protein of unknown function DUF1283 CH53_1506 ce16982840393da42b5e0d8451e90be6 638 Pfam PF00005 ABC transporter 17 178 4.9E-23 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1506 ce16982840393da42b5e0d8451e90be6 638 SMART SM00382 26 223 3.6E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1506 ce16982840393da42b5e0d8451e90be6 638 SMART SM00382 337 506 3.8E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1506 ce16982840393da42b5e0d8451e90be6 638 Pfam PF00005 ABC transporter 328 459 4.7E-26 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1506 ce16982840393da42b5e0d8451e90be6 638 Gene3D G3DSA:3.40.50.300 276 545 1.7E-58 T 18-10-2018 CH53_1506 ce16982840393da42b5e0d8451e90be6 638 SUPERFAMILY SSF52540 294 518 6.93E-48 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1506 ce16982840393da42b5e0d8451e90be6 638 Pfam PF12848 ABC transporter 217 297 9.8E-29 T 18-10-2018 IPR032781 ABC-transporter extension domain CH53_1506 ce16982840393da42b5e0d8451e90be6 638 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1506 ce16982840393da42b5e0d8451e90be6 638 Gene3D G3DSA:3.40.50.300 6 274 5.0E-60 T 18-10-2018 CH53_1506 ce16982840393da42b5e0d8451e90be6 638 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1506 ce16982840393da42b5e0d8451e90be6 638 SUPERFAMILY SSF52540 2 257 1.56E-46 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1857 092566c932e53e117adc21093337c54b 222 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 171 176 - T 18-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CH53_1857 092566c932e53e117adc21093337c54b 222 Gene3D G3DSA:3.40.140.10 98 222 3.0E-44 T 18-10-2018 CH53_1857 092566c932e53e117adc21093337c54b 222 TIGRFAM TIGR00608 radc: DNA repair protein RadC 10 222 5.4E-84 T 18-10-2018 IPR001405 Uncharacterised protein family UPF0758 CH53_1857 092566c932e53e117adc21093337c54b 222 Pfam PF04002 RadC-like JAB domain 102 220 5.3E-44 T 18-10-2018 IPR025657 RadC-like JAB domain CH53_1857 092566c932e53e117adc21093337c54b 222 Hamap MF_00018 UPF0758 protein YicR [yicR]. 2 222 53.164 T 18-10-2018 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily CH53_1857 092566c932e53e117adc21093337c54b 222 SUPERFAMILY SSF47781 16 85 6.23E-11 T 18-10-2018 IPR010994 RuvA domain 2-like CH53_2864 5e129d5d118afacc5682f63d456df80a 90 Gene3D G3DSA:4.10.520.10 1 90 3.2E-36 T 18-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CH53_2864 5e129d5d118afacc5682f63d456df80a 90 SUPERFAMILY SSF47729 1 90 9.57E-32 T 18-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CH53_2864 5e129d5d118afacc5682f63d456df80a 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 18-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CH53_2864 5e129d5d118afacc5682f63d456df80a 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.2E-19 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_2864 5e129d5d118afacc5682f63d456df80a 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.2E-19 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_2864 5e129d5d118afacc5682f63d456df80a 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.2E-19 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_2864 5e129d5d118afacc5682f63d456df80a 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.2E-32 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_2864 5e129d5d118afacc5682f63d456df80a 90 SMART SM00411 1 90 4.1E-43 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_141 e3cada328a22fede79c444d7c317f8fe 261 Pfam PF13847 Methyltransferase domain 46 147 9.2E-18 T 18-10-2018 IPR025714 Methyltransferase domain CH53_141 e3cada328a22fede79c444d7c317f8fe 261 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 255 41.886 T 18-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 CH53_141 e3cada328a22fede79c444d7c317f8fe 261 SUPERFAMILY SSF53335 4 255 4.14E-38 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_141 e3cada328a22fede79c444d7c317f8fe 261 Gene3D G3DSA:3.40.50.150 8 261 5.0E-71 T 18-10-2018 CH53_262 23e3c26ff46569e9e1a0103c69bf1e0f 533 SMART SM00382 312 502 4.2E-16 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_262 23e3c26ff46569e9e1a0103c69bf1e0f 533 SMART SM00382 35 235 7.6E-15 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_262 23e3c26ff46569e9e1a0103c69bf1e0f 533 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_262 23e3c26ff46569e9e1a0103c69bf1e0f 533 Pfam PF00005 ABC transporter 27 185 1.5E-27 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_262 23e3c26ff46569e9e1a0103c69bf1e0f 533 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 266 4.0E-5 T 18-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CH53_262 23e3c26ff46569e9e1a0103c69bf1e0f 533 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 527 0.12 T 18-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CH53_262 23e3c26ff46569e9e1a0103c69bf1e0f 533 SUPERFAMILY SSF52540 6 257 2.02E-63 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_262 23e3c26ff46569e9e1a0103c69bf1e0f 533 Pfam PF00005 ABC transporter 303 454 4.4E-31 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_262 23e3c26ff46569e9e1a0103c69bf1e0f 533 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_262 23e3c26ff46569e9e1a0103c69bf1e0f 533 Gene3D G3DSA:3.40.50.300 4 268 2.3E-80 T 18-10-2018 CH53_262 23e3c26ff46569e9e1a0103c69bf1e0f 533 Gene3D G3DSA:3.40.50.300 274 533 2.5E-81 T 18-10-2018 CH53_262 23e3c26ff46569e9e1a0103c69bf1e0f 533 SUPERFAMILY SSF52540 276 524 5.11E-65 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3807 54bef4e1a4fdc12831b26925a4608ba1 438 Pfam PF01551 Peptidase family M23 311 405 7.7E-34 T 18-10-2018 IPR016047 Peptidase M23 CH53_3807 54bef4e1a4fdc12831b26925a4608ba1 438 SUPERFAMILY SSF51261 163 406 1.1E-68 T 18-10-2018 IPR011055 Duplicated hybrid motif CH53_3807 54bef4e1a4fdc12831b26925a4608ba1 438 Gene3D G3DSA:3.10.450.350 84 173 4.8E-12 T 18-10-2018 CH53_3807 54bef4e1a4fdc12831b26925a4608ba1 438 SMART SM00257 96 141 8.3E-5 T 18-10-2018 IPR018392 LysM domain CH53_3807 54bef4e1a4fdc12831b26925a4608ba1 438 Pfam PF04225 Opacity-associated protein A LysM-like domain 95 158 2.3E-6 T 18-10-2018 IPR007340 Opacity-associated protein A CH53_3807 54bef4e1a4fdc12831b26925a4608ba1 438 Gene3D G3DSA:3.10.450.350 178 280 9.9E-31 T 18-10-2018 CH53_3807 54bef4e1a4fdc12831b26925a4608ba1 438 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 5.9E-8 T 18-10-2018 IPR013731 Opacity-associated protein A, N-terminal CH53_3807 54bef4e1a4fdc12831b26925a4608ba1 438 Gene3D G3DSA:2.70.70.10 282 411 1.0E-48 T 18-10-2018 IPR011055 Duplicated hybrid motif CH53_2831 abf1a3ac9ba5ceefc52747fe3de49a4f 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 46.976 T 18-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CH53_2831 abf1a3ac9ba5ceefc52747fe3de49a4f 356 Gene3D G3DSA:3.40.1780.10 14 343 5.0E-116 T 18-10-2018 CH53_2831 abf1a3ac9ba5ceefc52747fe3de49a4f 356 Gene3D G3DSA:2.40.10.240 64 163 5.0E-116 T 18-10-2018 CH53_2831 abf1a3ac9ba5ceefc52747fe3de49a4f 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 343 1.9E-159 T 18-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CH53_2831 abf1a3ac9ba5ceefc52747fe3de49a4f 356 Pfam PF02547 Queuosine biosynthesis protein 4 343 3.6E-131 T 18-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CH53_2831 abf1a3ac9ba5ceefc52747fe3de49a4f 356 SUPERFAMILY SSF111337 1 343 6.67E-137 T 18-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CH53_1585 16328698c7c1bfc0373e6d05cf690565 367 SUPERFAMILY SSF51735 1 147 5.26E-54 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1585 16328698c7c1bfc0373e6d05cf690565 367 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 7.3E-23 T 18-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CH53_1585 16328698c7c1bfc0373e6d05cf690565 367 SUPERFAMILY SSF55347 134 354 4.58E-79 T 18-10-2018 CH53_1585 16328698c7c1bfc0373e6d05cf690565 367 PIRSF PIRSF000148 1 367 6.1E-68 T 18-10-2018 CH53_1585 16328698c7c1bfc0373e6d05cf690565 367 SMART SM00859 3 122 1.2E-22 T 18-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CH53_1585 16328698c7c1bfc0373e6d05cf690565 367 Gene3D G3DSA:3.30.360.10 135 350 7.5E-151 T 18-10-2018 CH53_1585 16328698c7c1bfc0373e6d05cf690565 367 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 9.3E-213 T 18-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CH53_1585 16328698c7c1bfc0373e6d05cf690565 367 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 33.846 T 18-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CH53_1585 16328698c7c1bfc0373e6d05cf690565 367 Gene3D G3DSA:3.40.50.720 4 356 7.5E-151 T 18-10-2018 CH53_1585 16328698c7c1bfc0373e6d05cf690565 367 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 353 1.4E-57 T 18-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CH53_1585 16328698c7c1bfc0373e6d05cf690565 367 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 18-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CH53_3345 f6d7ee32b6785d80428d8d4daafeac36 493 Pfam PF00005 ABC transporter 20 169 6.2E-29 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3345 f6d7ee32b6785d80428d8d4daafeac36 493 SUPERFAMILY SSF52540 3 229 2.19E-54 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3345 f6d7ee32b6785d80428d8d4daafeac36 493 SMART SM00382 277 481 4.1E-4 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3345 f6d7ee32b6785d80428d8d4daafeac36 493 SMART SM00382 29 217 3.1E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3345 f6d7ee32b6785d80428d8d4daafeac36 493 Gene3D G3DSA:3.40.50.300 1 236 6.9E-56 T 18-10-2018 CH53_3345 f6d7ee32b6785d80428d8d4daafeac36 493 SUPERFAMILY SSF52540 268 477 2.17E-44 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3345 f6d7ee32b6785d80428d8d4daafeac36 493 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3345 f6d7ee32b6785d80428d8d4daafeac36 493 Pfam PF00005 ABC transporter 269 423 2.9E-23 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3345 f6d7ee32b6785d80428d8d4daafeac36 493 Gene3D G3DSA:3.40.50.300 252 489 1.4E-43 T 18-10-2018 CH53_3368 dd9566bd10d49778ef28a954888eea41 270 SMART SM00877 79 161 2.3E-12 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_3368 dd9566bd10d49778ef28a954888eea41 270 SMART SM00877 185 262 1.1E-14 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_3368 dd9566bd10d49778ef28a954888eea41 270 SUPERFAMILY SSF143414 186 260 1.44E-11 T 18-10-2018 IPR037233 CcmK-like superfamily CH53_3368 dd9566bd10d49778ef28a954888eea41 270 SUPERFAMILY SSF143414 79 158 4.45E-10 T 18-10-2018 IPR037233 CcmK-like superfamily CH53_3368 dd9566bd10d49778ef28a954888eea41 270 Pfam PF00936 BMC domain 186 256 4.3E-14 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_3368 dd9566bd10d49778ef28a954888eea41 270 Pfam PF00936 BMC domain 80 154 2.7E-13 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_3368 dd9566bd10d49778ef28a954888eea41 270 PIRSF PIRSF012290 38 270 1.7E-106 T 18-10-2018 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0031469 CH53_3368 dd9566bd10d49778ef28a954888eea41 270 Gene3D G3DSA:3.30.70.1810 60 152 5.8E-44 T 18-10-2018 CH53_3368 dd9566bd10d49778ef28a954888eea41 270 TIGRFAM TIGR04501 microcomp_PduB: microcompartment protein PduB 46 270 3.4E-121 T 18-10-2018 IPR030984 Microcompartment protein PduB GO:0005198 CH53_3368 dd9566bd10d49778ef28a954888eea41 270 Gene3D G3DSA:3.30.70.1810 153 244 5.8E-44 T 18-10-2018 CH53_827 db3a34d07be7d7b527c12f094e4062d1 476 Pfam PF02952 L-fucose isomerase, C-terminal domain 343 471 1.3E-38 T 18-10-2018 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 CH53_827 db3a34d07be7d7b527c12f094e4062d1 476 SUPERFAMILY SSF53743 6 325 5.89E-65 T 18-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 CH53_3731 aebfb6382b358a1392d1382bfacdb8f9 439 Gene3D G3DSA:3.90.1150.10 56 425 1.1E-102 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_3731 aebfb6382b358a1392d1382bfacdb8f9 439 Gene3D G3DSA:1.10.10.10 1 55 7.1E-5 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3731 aebfb6382b358a1392d1382bfacdb8f9 439 Gene3D G3DSA:3.40.640.10 101 319 1.1E-102 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_3731 aebfb6382b358a1392d1382bfacdb8f9 439 SUPERFAMILY SSF53383 20 428 1.35E-94 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_3731 aebfb6382b358a1392d1382bfacdb8f9 439 Pfam PF00155 Aminotransferase class I and II 106 417 3.6E-30 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_2630 9550cd919dd6a56c2a135a7ba6ef2bb5 231 SMART SM00448 3 114 8.2E-37 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_2630 9550cd919dd6a56c2a135a7ba6ef2bb5 231 SUPERFAMILY SSF52172 2 123 1.57E-36 T 18-10-2018 IPR011006 CheY-like superfamily CH53_2630 9550cd919dd6a56c2a135a7ba6ef2bb5 231 Pfam PF00072 Response regulator receiver domain 5 114 1.7E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_2630 9550cd919dd6a56c2a135a7ba6ef2bb5 231 SMART SM00862 152 228 1.3E-20 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_2630 9550cd919dd6a56c2a135a7ba6ef2bb5 231 Gene3D G3DSA:3.40.50.2300 1 131 3.0E-32 T 18-10-2018 CH53_2630 9550cd919dd6a56c2a135a7ba6ef2bb5 231 Gene3D G3DSA:1.10.10.10 132 231 3.5E-27 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2630 9550cd919dd6a56c2a135a7ba6ef2bb5 231 SUPERFAMILY SSF46894 131 228 8.02E-26 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_2630 9550cd919dd6a56c2a135a7ba6ef2bb5 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 1.8E-21 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_1789 c5c7d4feba6fcda402010aa2eb50ce2d 295 Gene3D G3DSA:3.40.50.2300 127 262 1.0E-98 T 18-10-2018 CH53_1789 c5c7d4feba6fcda402010aa2eb50ce2d 295 Gene3D G3DSA:3.40.50.2300 31 281 1.0E-98 T 18-10-2018 CH53_1789 c5c7d4feba6fcda402010aa2eb50ce2d 295 Pfam PF13407 Periplasmic binding protein domain 29 281 2.9E-60 T 18-10-2018 IPR025997 Periplasmic binding protein CH53_1789 c5c7d4feba6fcda402010aa2eb50ce2d 295 SUPERFAMILY SSF53822 26 295 1.44E-87 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_4418 5f44567065d73f50de878e59ed8df3b4 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 50.938 T 18-10-2018 IPR022987 Uncharacterised protein family UPF0227 CH53_4418 5f44567065d73f50de878e59ed8df3b4 180 Gene3D G3DSA:3.40.50.1820 1 179 8.0E-19 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_4418 5f44567065d73f50de878e59ed8df3b4 180 SUPERFAMILY SSF53474 1 176 4.15E-6 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_4418 5f44567065d73f50de878e59ed8df3b4 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 2.5E-69 T 18-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 Gene3D G3DSA:3.40.50.720 269 565 4.8E-108 T 18-10-2018 CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 SUPERFAMILY SSF51735 271 562 1.7E-93 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 Gene3D G3DSA:3.40.50.10380 18 268 2.9E-115 T 18-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 PRINTS PR00072 Malic enzyme signature 87 111 1.2E-71 T 18-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 PRINTS PR00072 Malic enzyme signature 242 260 1.2E-71 T 18-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 PRINTS PR00072 Malic enzyme signature 408 424 1.2E-71 T 18-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 PRINTS PR00072 Malic enzyme signature 147 176 1.2E-71 T 18-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 PRINTS PR00072 Malic enzyme signature 183 205 1.2E-71 T 18-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 PRINTS PR00072 Malic enzyme signature 267 283 1.2E-71 T 18-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 PRINTS PR00072 Malic enzyme signature 298 314 1.2E-71 T 18-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 18-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.268 T 18-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 SMART SM01274 81 261 4.4E-109 T 18-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 SMART SM00919 271 531 3.2E-131 T 18-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 PIRSF PIRSF000106 3 563 2.1E-227 T 18-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 5.4E-79 T 18-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 SUPERFAMILY SSF53223 6 270 6.12E-111 T 18-10-2018 CH53_3292 8a2b17a3b01695da906d0b704a2db8eb 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 8.4E-102 T 18-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CH53_2719 6bf122c771a660a6ff2c8299a11106e8 263 SUPERFAMILY SSF55920 3 255 2.62E-89 T 18-10-2018 IPR036005 Creatinase/aminopeptidase-like CH53_2719 6bf122c771a660a6ff2c8299a11106e8 263 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 18-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CH53_2719 6bf122c771a660a6ff2c8299a11106e8 263 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 43.048 T 18-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CH53_2719 6bf122c771a660a6ff2c8299a11106e8 263 Pfam PF00557 Metallopeptidase family M24 13 242 2.4E-51 T 18-10-2018 IPR000994 Peptidase M24 CH53_2719 6bf122c771a660a6ff2c8299a11106e8 263 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 4.3E-108 T 18-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CH53_2719 6bf122c771a660a6ff2c8299a11106e8 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 1.5E-22 T 18-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CH53_2719 6bf122c771a660a6ff2c8299a11106e8 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 1.5E-22 T 18-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CH53_2719 6bf122c771a660a6ff2c8299a11106e8 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 1.5E-22 T 18-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CH53_2719 6bf122c771a660a6ff2c8299a11106e8 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 1.5E-22 T 18-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CH53_2719 6bf122c771a660a6ff2c8299a11106e8 263 Gene3D G3DSA:3.90.230.10 2 263 2.1E-116 T 18-10-2018 CH53_788 642331386bfc478d3fce300d2d65fc95 357 Gene3D G3DSA:1.20.58.1390 102 315 9.7E-112 T 18-10-2018 CH53_788 642331386bfc478d3fce300d2d65fc95 357 SUPERFAMILY SSF53335 100 341 9.85E-38 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_788 642331386bfc478d3fce300d2d65fc95 357 Gene3D G3DSA:1.10.10.10 1 99 1.1E-31 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_788 642331386bfc478d3fce300d2d65fc95 357 PIRSF PIRSF005739 3 351 6.0E-7 T 18-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 CH53_788 642331386bfc478d3fce300d2d65fc95 357 Gene3D G3DSA:3.40.50.150 167 350 9.7E-112 T 18-10-2018 CH53_788 642331386bfc478d3fce300d2d65fc95 357 Pfam PF00891 O-methyltransferase 182 335 2.8E-14 T 18-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 CH53_1946 235d65f6df2b3ac1965d4807b6841da0 293 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 284 51.691 T 18-10-2018 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 CH53_1946 235d65f6df2b3ac1965d4807b6841da0 293 Gene3D G3DSA:1.10.10.10 1 84 2.5E-24 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1946 235d65f6df2b3ac1965d4807b6841da0 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.3E-20 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1946 235d65f6df2b3ac1965d4807b6841da0 293 Pfam PF03466 LysR substrate binding domain 88 280 3.2E-19 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_1946 235d65f6df2b3ac1965d4807b6841da0 293 Gene3D G3DSA:3.40.190.10 90 271 7.8E-14 T 18-10-2018 CH53_1946 235d65f6df2b3ac1965d4807b6841da0 293 Gene3D G3DSA:3.40.190.10 162 260 7.8E-14 T 18-10-2018 CH53_1946 235d65f6df2b3ac1965d4807b6841da0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-9 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1946 235d65f6df2b3ac1965d4807b6841da0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-9 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1946 235d65f6df2b3ac1965d4807b6841da0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-9 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1946 235d65f6df2b3ac1965d4807b6841da0 293 SUPERFAMILY SSF53850 90 287 3.98E-19 T 18-10-2018 CH53_1946 235d65f6df2b3ac1965d4807b6841da0 293 SUPERFAMILY SSF46785 2 82 5.45E-22 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3687 cb0cc2989f674d41829ec4cbd45fd1cd 225 SUPERFAMILY SSF103501 1 224 5.75E-72 T 18-10-2018 IPR036197 NarG-like superfamily CH53_3687 cb0cc2989f674d41829ec4cbd45fd1cd 225 Pfam PF02665 Nitrate reductase gamma subunit 5 224 7.6E-81 T 18-10-2018 IPR023234 NarG-like domain CH53_3687 cb0cc2989f674d41829ec4cbd45fd1cd 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 1.9E-112 T 18-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 CH53_3687 cb0cc2989f674d41829ec4cbd45fd1cd 225 Gene3D G3DSA:1.20.950.20 1 216 6.2E-84 T 18-10-2018 CH53_740 6f4fd7490bdf9680e1782ee404e199e8 331 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 279 321 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CH53_740 6f4fd7490bdf9680e1782ee404e199e8 331 SUPERFAMILY SSF46689 227 276 6.57E-6 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_740 6f4fd7490bdf9680e1782ee404e199e8 331 Gene3D G3DSA:3.40.50.880 19 226 7.3E-56 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_740 6f4fd7490bdf9680e1782ee404e199e8 331 SUPERFAMILY SSF46689 279 329 2.55E-12 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_740 6f4fd7490bdf9680e1782ee404e199e8 331 SMART SM00342 242 325 1.3E-28 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_740 6f4fd7490bdf9680e1782ee404e199e8 331 Gene3D G3DSA:1.10.10.60 227 330 4.9E-26 T 18-10-2018 CH53_740 6f4fd7490bdf9680e1782ee404e199e8 331 Pfam PF01965 DJ-1/PfpI family 54 186 2.5E-19 T 18-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CH53_740 6f4fd7490bdf9680e1782ee404e199e8 331 SUPERFAMILY SSF52317 20 208 1.08E-46 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_740 6f4fd7490bdf9680e1782ee404e199e8 331 Pfam PF12833 Helix-turn-helix domain 248 327 4.1E-21 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_3567 0edabdf1389fb6b416f8363ad3a1be49 334 SUPERFAMILY SSF101801 249 322 1.83E-12 T 18-10-2018 IPR036429 SpoA-like superfamily CH53_3567 0edabdf1389fb6b416f8363ad3a1be49 334 SUPERFAMILY SSF103039 48 230 3.14E-20 T 18-10-2018 IPR028976 CheC-like superfamily CH53_3567 0edabdf1389fb6b416f8363ad3a1be49 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 252 320 1.4E-15 T 18-10-2018 IPR001543 Surface presentation of antigen (SpoA) CH53_3567 0edabdf1389fb6b416f8363ad3a1be49 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 1.4E-30 T 18-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CH53_3567 0edabdf1389fb6b416f8363ad3a1be49 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 1.4E-30 T 18-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CH53_3567 0edabdf1389fb6b416f8363ad3a1be49 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 1.4E-30 T 18-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CH53_3567 0edabdf1389fb6b416f8363ad3a1be49 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 1.4E-30 T 18-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CH53_3567 0edabdf1389fb6b416f8363ad3a1be49 334 Pfam PF02154 Flagellar motor switch protein FliM 37 230 6.3E-76 T 18-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CH53_3567 0edabdf1389fb6b416f8363ad3a1be49 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 320 4.8E-111 T 18-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CH53_3567 0edabdf1389fb6b416f8363ad3a1be49 334 Gene3D G3DSA:3.40.1550.10 43 232 2.4E-56 T 18-10-2018 IPR028976 CheC-like superfamily CH53_3567 0edabdf1389fb6b416f8363ad3a1be49 334 PIRSF PIRSF002888 2 330 1.2E-96 T 18-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CH53_2171 fbcf7243e35fecce013c6fa953a4fdda 241 SUPERFAMILY SSF52540 1 235 8.24E-82 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2171 fbcf7243e35fecce013c6fa953a4fdda 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2171 fbcf7243e35fecce013c6fa953a4fdda 241 PIRSF PIRSF039085 1 241 6.7E-108 T 18-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CH53_2171 fbcf7243e35fecce013c6fa953a4fdda 241 SMART SM00382 26 213 3.0E-17 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2171 fbcf7243e35fecce013c6fa953a4fdda 241 Pfam PF00005 ABC transporter 17 165 1.1E-37 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2171 fbcf7243e35fecce013c6fa953a4fdda 241 Gene3D G3DSA:3.40.50.300 1 241 2.6E-79 T 18-10-2018 CH53_4234 b7ceecd2b4669c2836af594117ce9c67 508 SMART SM00382 35 225 4.9E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_4234 b7ceecd2b4669c2836af594117ce9c67 508 SMART SM00382 284 479 0.74 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_4234 b7ceecd2b4669c2836af594117ce9c67 508 SUPERFAMILY SSF52540 277 488 4.05E-38 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4234 b7ceecd2b4669c2836af594117ce9c67 508 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_4234 b7ceecd2b4669c2836af594117ce9c67 508 Gene3D G3DSA:3.40.50.300 275 504 3.1E-36 T 18-10-2018 CH53_4234 b7ceecd2b4669c2836af594117ce9c67 508 Pfam PF00005 ABC transporter 27 177 6.1E-31 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_4234 b7ceecd2b4669c2836af594117ce9c67 508 SUPERFAMILY SSF52540 9 234 3.55E-57 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4234 b7ceecd2b4669c2836af594117ce9c67 508 Gene3D G3DSA:3.40.50.300 1 255 5.6E-61 T 18-10-2018 CH53_4234 b7ceecd2b4669c2836af594117ce9c67 508 Pfam PF00005 ABC transporter 277 431 3.9E-15 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_166 8b72142852dfa74fbb3a1a591346a808 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 32 191 8.2E-59 T 18-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CH53_166 8b72142852dfa74fbb3a1a591346a808 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 10 201 31.575 T 18-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CH53_166 8b72142852dfa74fbb3a1a591346a808 203 Gene3D G3DSA:2.50.20.10 20 202 1.2E-53 T 18-10-2018 CH53_166 8b72142852dfa74fbb3a1a591346a808 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 203 1.2E-97 T 18-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CH53_166 8b72142852dfa74fbb3a1a591346a808 203 SUPERFAMILY SSF89392 24 202 3.49E-56 T 18-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CH53_2612 ada0e288fc8b57fe7994898e70c1af55 220 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.894 T 18-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CH53_2612 ada0e288fc8b57fe7994898e70c1af55 220 Gene3D G3DSA:3.40.50.1360 7 207 3.7E-74 T 18-10-2018 CH53_2612 ada0e288fc8b57fe7994898e70c1af55 220 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 2.7E-57 T 18-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CH53_2612 ada0e288fc8b57fe7994898e70c1af55 220 SUPERFAMILY SSF100950 1 146 3.81E-47 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_2612 ada0e288fc8b57fe7994898e70c1af55 220 Gene3D G3DSA:3.30.70.260 125 196 3.7E-74 T 18-10-2018 CH53_2612 ada0e288fc8b57fe7994898e70c1af55 220 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 1.1E-68 T 18-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CH53_2612 ada0e288fc8b57fe7994898e70c1af55 220 SUPERFAMILY SSF75445 127 198 2.35E-23 T 18-10-2018 CH53_1766 f34b709e40daf90502b7e34b6849af76 609 Gene3D G3DSA:3.40.50.10490 249 608 1.9E-153 T 18-10-2018 CH53_1766 f34b709e40daf90502b7e34b6849af76 609 Gene3D G3DSA:3.40.50.10490 447 594 1.9E-153 T 18-10-2018 CH53_1766 f34b709e40daf90502b7e34b6849af76 609 SUPERFAMILY SSF56235 2 233 1.8E-74 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CH53_1766 f34b709e40daf90502b7e34b6849af76 609 SUPERFAMILY SSF53697 245 609 8.62E-113 T 18-10-2018 CH53_1766 f34b709e40daf90502b7e34b6849af76 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.2E-263 T 18-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CH53_1766 f34b709e40daf90502b7e34b6849af76 609 Pfam PF01380 SIS domain 462 591 3.1E-28 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_1766 f34b709e40daf90502b7e34b6849af76 609 Pfam PF01380 SIS domain 289 417 1.0E-33 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_1766 f34b709e40daf90502b7e34b6849af76 609 Gene3D G3DSA:3.60.20.10 2 241 1.9E-82 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CH53_1766 f34b709e40daf90502b7e34b6849af76 609 Pfam PF13522 Glutamine amidotransferase domain 62 184 1.0E-20 T 18-10-2018 CH53_1766 f34b709e40daf90502b7e34b6849af76 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 41.045 T 18-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 SMART SM00267 387 565 1.5E-61 T 18-10-2018 IPR000160 GGDEF domain CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 SUPERFAMILY SSF55785 251 377 1.31E-23 T 18-10-2018 IPR035965 PAS domain superfamily CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 Pfam PF08448 PAS fold 152 254 1.1E-9 T 18-10-2018 IPR013656 PAS fold-4 CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 Gene3D G3DSA:3.30.450.20 269 377 1.1E-23 T 18-10-2018 CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 133 9.6E-14 T 18-10-2018 IPR000014 PAS domain CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 262 387 7.8E-16 T 18-10-2018 IPR000014 PAS domain CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 261 1.6E-8 T 18-10-2018 IPR000014 PAS domain CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 394 564 1.8E-49 T 18-10-2018 IPR000160 GGDEF domain CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 Pfam PF13426 PAS domain 31 132 1.2E-9 T 18-10-2018 IPR000014 PAS domain CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 Pfam PF08447 PAS fold 289 374 1.7E-15 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 Gene3D G3DSA:3.30.450.20 142 268 2.8E-18 T 18-10-2018 CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 Pfam PF00990 Diguanylate cyclase, GGDEF domain 398 561 5.0E-47 T 18-10-2018 IPR000160 GGDEF domain CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 SUPERFAMILY SSF55785 16 131 8.24E-19 T 18-10-2018 IPR035965 PAS domain superfamily CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 SMART SM00091 266 332 2.4E-6 T 18-10-2018 IPR000014 PAS domain CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 SMART SM00091 20 86 8.1E-7 T 18-10-2018 IPR000014 PAS domain CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 SMART SM00091 144 210 4.6 T 18-10-2018 IPR000014 PAS domain CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 SMART SM00086 93 135 5.5E-4 T 18-10-2018 IPR001610 PAC motif CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 SMART SM00086 338 380 0.015 T 18-10-2018 IPR001610 PAC motif CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 Gene3D G3DSA:3.30.450.20 20 132 1.3E-17 T 18-10-2018 CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 SUPERFAMILY SSF55785 149 256 6.7E-10 T 18-10-2018 IPR035965 PAS domain superfamily CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 SUPERFAMILY SSF55073 403 563 3.69E-45 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_4282 95f3d69301fc1ba5ec0a9eed61313501 569 Gene3D G3DSA:3.30.70.270 384 566 3.9E-57 T 18-10-2018 CH53_2546 474f13f37980efa7c8c09bb5c47698b6 888 Gene3D G3DSA:3.10.20.410 59 186 2.5E-27 T 18-10-2018 CH53_2546 474f13f37980efa7c8c09bb5c47698b6 888 Pfam PF13954 PapC N-terminal domain 61 208 2.4E-37 T 18-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 CH53_2546 474f13f37980efa7c8c09bb5c47698b6 888 Gene3D G3DSA:2.60.40.3110 299 388 2.9E-31 T 18-10-2018 CH53_2546 474f13f37980efa7c8c09bb5c47698b6 888 Gene3D G3DSA:2.60.40.2070 803 885 3.6E-5 T 18-10-2018 CH53_2546 474f13f37980efa7c8c09bb5c47698b6 888 Gene3D G3DSA:2.60.40.2610 707 798 1.5E-25 T 18-10-2018 CH53_2546 474f13f37980efa7c8c09bb5c47698b6 888 Pfam PF00577 Outer membrane usher protein 232 790 3.6E-144 T 18-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 CH53_2546 474f13f37980efa7c8c09bb5c47698b6 888 SUPERFAMILY SSF141729 60 186 3.53E-28 T 18-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 CH53_2546 474f13f37980efa7c8c09bb5c47698b6 888 Pfam PF13953 PapC C-terminal domain 805 862 1.7E-6 T 18-10-2018 IPR025949 PapC-like, C-terminal domain CH53_595 583209c471f6f34b7fa62b857946d508 491 Gene3D G3DSA:1.10.357.20 317 491 1.7E-47 T 18-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain CH53_595 583209c471f6f34b7fa62b857946d508 491 SUPERFAMILY SSF161093 319 490 5.89E-48 T 18-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 CH53_595 583209c471f6f34b7fa62b857946d508 491 Gene3D G3DSA:1.25.60.10 49 173 9.7E-16 T 18-10-2018 IPR038076 MgtE, N-terminal domain superfamily CH53_595 583209c471f6f34b7fa62b857946d508 491 Pfam PF00571 CBS domain 244 296 1.2E-4 T 18-10-2018 IPR000644 CBS domain CH53_595 583209c471f6f34b7fa62b857946d508 491 Pfam PF01769 Divalent cation transporter 362 483 5.3E-24 T 18-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CH53_595 583209c471f6f34b7fa62b857946d508 491 SUPERFAMILY SSF158791 55 173 5.1E-23 T 18-10-2018 CH53_595 583209c471f6f34b7fa62b857946d508 491 Gene3D G3DSA:3.10.580.10 175 301 3.7E-40 T 18-10-2018 CH53_595 583209c471f6f34b7fa62b857946d508 491 SMART SM00924 75 178 8.0E-32 T 18-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CH53_595 583209c471f6f34b7fa62b857946d508 491 SUPERFAMILY SSF54631 177 316 9.73E-25 T 18-10-2018 CH53_595 583209c471f6f34b7fa62b857946d508 491 Pfam PF03448 MgtE intracellular N domain 75 175 1.0E-22 T 18-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CH53_595 583209c471f6f34b7fa62b857946d508 491 TIGRFAM TIGR00400 mgtE: magnesium transporter 64 491 4.2E-76 T 18-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CH53_3316 13e12f98e7870b00b25a70ff9b3e2697 208 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 75 186 5.9E-15 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_3316 13e12f98e7870b00b25a70ff9b3e2697 208 Gene3D G3DSA:1.10.150.240 15 88 2.5E-45 T 18-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CH53_3316 13e12f98e7870b00b25a70ff9b3e2697 208 SUPERFAMILY SSF56784 1 189 2.07E-43 T 18-10-2018 IPR036412 HAD-like superfamily CH53_3316 13e12f98e7870b00b25a70ff9b3e2697 208 Gene3D G3DSA:3.40.50.1000 3 192 2.5E-45 T 18-10-2018 IPR023214 HAD superfamily CH53_3316 13e12f98e7870b00b25a70ff9b3e2697 208 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 186 1.2E-33 T 18-10-2018 CH53_527 144f019b1e3757c94cd8a029bfe8a634 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.9E-50 T 18-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CH53_527 144f019b1e3757c94cd8a029bfe8a634 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 18-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CH53_527 144f019b1e3757c94cd8a029bfe8a634 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 2.8E-49 T 18-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CH53_527 144f019b1e3757c94cd8a029bfe8a634 169 Gene3D G3DSA:2.70.70.10 9 169 3.3E-63 T 18-10-2018 IPR011055 Duplicated hybrid motif CH53_527 144f019b1e3757c94cd8a029bfe8a634 169 SUPERFAMILY SSF51261 12 167 5.23E-56 T 18-10-2018 IPR011055 Duplicated hybrid motif CH53_681 df0434a83023bae87b07ebc29430f3ab 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 151 163 2.7E-26 T 18-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CH53_681 df0434a83023bae87b07ebc29430f3ab 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 272 291 2.7E-26 T 18-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CH53_681 df0434a83023bae87b07ebc29430f3ab 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 87 103 2.7E-26 T 18-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CH53_681 df0434a83023bae87b07ebc29430f3ab 332 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 72 167 6.6E-25 T 18-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CH53_681 df0434a83023bae87b07ebc29430f3ab 332 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 268 312 4.6E-17 T 18-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CH53_681 df0434a83023bae87b07ebc29430f3ab 332 SUPERFAMILY SSF51306 85 331 2.04E-78 T 18-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CH53_681 df0434a83023bae87b07ebc29430f3ab 332 Pfam PF00717 Peptidase S24-like 93 165 8.0E-20 T 18-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CH53_681 df0434a83023bae87b07ebc29430f3ab 332 Gene3D G3DSA:2.10.109.10 87 312 4.0E-74 T 18-10-2018 CH53_681 df0434a83023bae87b07ebc29430f3ab 332 ProSitePatterns PS00501 Signal peptidases I serine active site. 96 103 - T 18-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 CH53_681 df0434a83023bae87b07ebc29430f3ab 332 ProSitePatterns PS00760 Signal peptidases I lysine active site. 153 165 - T 18-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CH53_681 df0434a83023bae87b07ebc29430f3ab 332 Pfam PF10502 Signal peptidase, peptidase S26 270 310 3.3E-6 T 18-10-2018 IPR019533 Peptidase S26 CH53_681 df0434a83023bae87b07ebc29430f3ab 332 Gene3D G3DSA:2.170.230.10 162 271 4.0E-74 T 18-10-2018 CH53_681 df0434a83023bae87b07ebc29430f3ab 332 ProSitePatterns PS00761 Signal peptidases I signature 3. 277 290 - T 18-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CH53_2712 e33b398543a30eef8b4edb8a3e62675d 183 Gene3D G3DSA:3.40.1580.20 1 181 3.5E-66 T 18-10-2018 IPR038228 Syd superfamily CH53_2712 e33b398543a30eef8b4edb8a3e62675d 183 Pfam PF07348 Syd protein (SUKH-2) 7 179 1.9E-69 T 18-10-2018 IPR009948 Syd GO:0009898 CH53_2712 e33b398543a30eef8b4edb8a3e62675d 183 Hamap MF_01104 Protein Syd [syd]. 3 181 35.992 T 18-10-2018 IPR009948 Syd GO:0009898 CH53_2766 ccd184e6dc3324e874acb0886d342ec9 170 SMART SM00347 46 148 2.1E-31 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CH53_2766 ccd184e6dc3324e874acb0886d342ec9 170 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 18-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CH53_2766 ccd184e6dc3324e874acb0886d342ec9 170 Pfam PF01047 MarR family 53 112 2.6E-16 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CH53_2766 ccd184e6dc3324e874acb0886d342ec9 170 Gene3D G3DSA:1.10.10.10 10 164 6.0E-30 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2766 ccd184e6dc3324e874acb0886d342ec9 170 SUPERFAMILY SSF46785 21 165 2.87E-29 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2766 ccd184e6dc3324e874acb0886d342ec9 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 1.9E-22 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CH53_2766 ccd184e6dc3324e874acb0886d342ec9 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 1.9E-22 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CH53_2766 ccd184e6dc3324e874acb0886d342ec9 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 1.9E-22 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CH53_2766 ccd184e6dc3324e874acb0886d342ec9 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 1.9E-22 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CH53_2520 16c2f89d1137c9422e597f244a31e548 219 Pfam PF00936 BMC domain 36 105 1.4E-12 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_2520 16c2f89d1137c9422e597f244a31e548 219 Pfam PF00936 BMC domain 162 208 2.9E-6 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_2520 16c2f89d1137c9422e597f244a31e548 219 PIRSF PIRSF012290 1 219 4.3E-75 T 18-10-2018 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0031469 CH53_2520 16c2f89d1137c9422e597f244a31e548 219 SUPERFAMILY SSF143414 159 211 1.02E-5 T 18-10-2018 IPR037233 CcmK-like superfamily CH53_2520 16c2f89d1137c9422e597f244a31e548 219 SMART SM00877 35 110 1.5E-5 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_2520 16c2f89d1137c9422e597f244a31e548 219 SMART SM00877 146 219 5.5E-6 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_2520 16c2f89d1137c9422e597f244a31e548 219 Gene3D G3DSA:3.30.70.1810 8 108 3.7E-39 T 18-10-2018 CH53_2520 16c2f89d1137c9422e597f244a31e548 219 Gene3D G3DSA:3.30.70.1810 109 219 1.5E-51 T 18-10-2018 CH53_2520 16c2f89d1137c9422e597f244a31e548 219 SUPERFAMILY SSF143414 35 109 4.84E-6 T 18-10-2018 IPR037233 CcmK-like superfamily CH53_2520 16c2f89d1137c9422e597f244a31e548 219 TIGRFAM TIGR04502 microcomp_EutL: microcompartment protein EutL 6 217 4.2E-95 T 18-10-2018 IPR030983 Ethanolamine utilization protein EutL GO:0005198 CH53_2121 5a1d38185692289c8ac48cc04c6aa894 532 Gene3D G3DSA:3.20.20.360 2 410 5.1E-192 T 18-10-2018 CH53_2121 5a1d38185692289c8ac48cc04c6aa894 532 PIRSF PIRSF001363 1 532 1.0E-247 T 18-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CH53_2121 5a1d38185692289c8ac48cc04c6aa894 532 Pfam PF01274 Malate synthase 12 531 2.0E-206 T 18-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CH53_2121 5a1d38185692289c8ac48cc04c6aa894 532 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 23 531 7.8E-250 T 18-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CH53_2121 5a1d38185692289c8ac48cc04c6aa894 532 SUPERFAMILY SSF51645 9 531 1.7E-187 T 18-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CH53_2121 5a1d38185692289c8ac48cc04c6aa894 532 Gene3D G3DSA:1.20.1220.12 411 532 2.6E-49 T 18-10-2018 CH53_435 8a1be116671d80afdb39715fb3aaa805 310 SUPERFAMILY SSF53335 15 294 3.47E-49 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_435 8a1be116671d80afdb39715fb3aaa805 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 299 1.5E-98 T 18-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CH53_435 8a1be116671d80afdb39715fb3aaa805 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 18-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CH53_435 8a1be116671d80afdb39715fb3aaa805 310 Gene3D G3DSA:3.40.50.150 109 273 2.2E-44 T 18-10-2018 CH53_435 8a1be116671d80afdb39715fb3aaa805 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.018 T 18-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CH53_435 8a1be116671d80afdb39715fb3aaa805 310 Pfam PF05175 Methyltransferase small domain 132 215 8.9E-16 T 18-10-2018 IPR007848 Methyltransferase small domain GO:0008168 CH53_435 8a1be116671d80afdb39715fb3aaa805 310 PIRSF PIRSF037167 2 307 4.9E-148 T 18-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CH53_435 8a1be116671d80afdb39715fb3aaa805 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 8.8E-137 T 18-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CH53_4100 df9568fa8c4e8cf16e104796e4e4bec0 316 SUPERFAMILY SSF46785 7 88 1.24E-19 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_4100 df9568fa8c4e8cf16e104796e4e4bec0 316 SUPERFAMILY SSF53850 89 292 7.29E-31 T 18-10-2018 CH53_4100 df9568fa8c4e8cf16e104796e4e4bec0 316 Gene3D G3DSA:1.10.10.10 4 89 3.6E-23 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4100 df9568fa8c4e8cf16e104796e4e4bec0 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.5E-19 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_4100 df9568fa8c4e8cf16e104796e4e4bec0 316 Gene3D G3DSA:3.40.190.290 93 270 1.1E-13 T 18-10-2018 CH53_4100 df9568fa8c4e8cf16e104796e4e4bec0 316 Pfam PF03466 LysR substrate binding domain 88 291 2.8E-27 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_3462 054574310c682f3dfeb0a6a5986d59f8 339 Gene3D G3DSA:1.10.260.40 1 52 1.8E-17 T 18-10-2018 CH53_3462 054574310c682f3dfeb0a6a5986d59f8 339 Gene3D G3DSA:3.40.50.2300 165 294 8.4E-56 T 18-10-2018 CH53_3462 054574310c682f3dfeb0a6a5986d59f8 339 SMART SM00354 6 75 1.7E-7 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_3462 054574310c682f3dfeb0a6a5986d59f8 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 4.6E-13 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_3462 054574310c682f3dfeb0a6a5986d59f8 339 SUPERFAMILY SSF53822 66 334 1.0E-62 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_3462 054574310c682f3dfeb0a6a5986d59f8 339 Gene3D G3DSA:3.40.50.2300 66 310 8.4E-56 T 18-10-2018 CH53_3462 054574310c682f3dfeb0a6a5986d59f8 339 SUPERFAMILY SSF47413 7 61 3.75E-12 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_3462 054574310c682f3dfeb0a6a5986d59f8 339 Pfam PF13377 Periplasmic binding protein-like domain 174 334 2.9E-32 T 18-10-2018 CH53_1814 914a7d86398a5fd6ad6afe1ff6af5ca5 307 SUPERFAMILY SSF55729 2 145 1.16E-27 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_1814 914a7d86398a5fd6ad6afe1ff6af5ca5 307 Gene3D G3DSA:3.10.129.10 147 299 2.4E-45 T 18-10-2018 CH53_1814 914a7d86398a5fd6ad6afe1ff6af5ca5 307 SUPERFAMILY SSF54637 155 297 4.32E-43 T 18-10-2018 IPR029069 HotDog domain superfamily CH53_1814 914a7d86398a5fd6ad6afe1ff6af5ca5 307 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 165 298 1.8E-49 T 18-10-2018 IPR012660 Thioesterase, putative CH53_1814 914a7d86398a5fd6ad6afe1ff6af5ca5 307 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 297 5.0E-50 T 18-10-2018 IPR012660 Thioesterase, putative CH53_1814 914a7d86398a5fd6ad6afe1ff6af5ca5 307 Gene3D G3DSA:3.40.630.30 2 145 9.9E-26 T 18-10-2018 CH53_1814 914a7d86398a5fd6ad6afe1ff6af5ca5 307 Pfam PF00583 Acetyltransferase (GNAT) family 21 122 1.7E-13 T 18-10-2018 IPR000182 GNAT domain CH53_3361 2005a7369d9ba072d184424b4cacece3 190 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 66 2.0E-11 T 18-10-2018 CH53_3361 2005a7369d9ba072d184424b4cacece3 190 Pfam PF00936 BMC domain 4 80 1.7E-19 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_3361 2005a7369d9ba072d184424b4cacece3 190 Gene3D G3DSA:3.30.70.1710 1 99 1.7E-23 T 18-10-2018 CH53_3361 2005a7369d9ba072d184424b4cacece3 190 SUPERFAMILY SSF143414 4 90 3.4E-21 T 18-10-2018 IPR037233 CcmK-like superfamily CH53_3361 2005a7369d9ba072d184424b4cacece3 190 SMART SM00877 3 80 3.7E-23 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_3961 e0cfc4c2b5658214fa67ae3fead9f3e7 464 Gene3D G3DSA:1.20.200.10 139 407 6.9E-120 T 18-10-2018 CH53_3961 e0cfc4c2b5658214fa67ae3fead9f3e7 464 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 2.6E-33 T 18-10-2018 IPR000362 Fumarate lyase family CH53_3961 e0cfc4c2b5658214fa67ae3fead9f3e7 464 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 2.6E-33 T 18-10-2018 IPR000362 Fumarate lyase family CH53_3961 e0cfc4c2b5658214fa67ae3fead9f3e7 464 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 2.6E-33 T 18-10-2018 IPR000362 Fumarate lyase family CH53_3961 e0cfc4c2b5658214fa67ae3fead9f3e7 464 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 2.6E-33 T 18-10-2018 IPR000362 Fumarate lyase family CH53_3961 e0cfc4c2b5658214fa67ae3fead9f3e7 464 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 18-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CH53_3961 e0cfc4c2b5658214fa67ae3fead9f3e7 464 SUPERFAMILY SSF48557 4 462 3.3E-158 T 18-10-2018 IPR008948 L-Aspartase-like GO:0003824 CH53_3961 e0cfc4c2b5658214fa67ae3fead9f3e7 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 91.381 T 18-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CH53_3961 e0cfc4c2b5658214fa67ae3fead9f3e7 464 Gene3D G3DSA:1.10.40.30 408 464 3.0E-32 T 18-10-2018 CH53_3961 e0cfc4c2b5658214fa67ae3fead9f3e7 464 Gene3D G3DSA:1.10.275.10 5 138 1.1E-55 T 18-10-2018 IPR024083 Fumarase/histidase, N-terminal CH53_3961 e0cfc4c2b5658214fa67ae3fead9f3e7 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 1.7E-242 T 18-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CH53_3961 e0cfc4c2b5658214fa67ae3fead9f3e7 464 Pfam PF10415 Fumarase C C-terminus 408 461 4.3E-27 T 18-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CH53_3961 e0cfc4c2b5658214fa67ae3fead9f3e7 464 Pfam PF00206 Lyase 12 342 5.4E-116 T 18-10-2018 IPR022761 Fumarate lyase, N-terminal CH53_3293 c97265d08f5579ff4644e582b5be62ad 297 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 18-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CH53_3293 c97265d08f5579ff4644e582b5be62ad 297 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 3.6E-42 T 18-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CH53_3293 c97265d08f5579ff4644e582b5be62ad 297 Gene3D G3DSA:3.40.140.10 29 179 2.3E-42 T 18-10-2018 CH53_3293 c97265d08f5579ff4644e582b5be62ad 297 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 67 140 1.8E-11 T 18-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CH53_3293 c97265d08f5579ff4644e582b5be62ad 297 Gene3D G3DSA:3.40.140.10 181 295 2.1E-25 T 18-10-2018 CH53_3293 c97265d08f5579ff4644e582b5be62ad 297 SUPERFAMILY SSF53927 154 292 1.67E-38 T 18-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CH53_3293 c97265d08f5579ff4644e582b5be62ad 297 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.256 T 18-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CH53_3293 c97265d08f5579ff4644e582b5be62ad 297 SUPERFAMILY SSF53927 1 149 1.17E-41 T 18-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CH53_3293 c97265d08f5579ff4644e582b5be62ad 297 PIRSF PIRSF006334 14 296 4.3E-104 T 18-10-2018 CH53_3406 c446075314f3a16165d75dec4b1f770d 298 SUPERFAMILY SSF46785 3 80 1.13E-18 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3406 c446075314f3a16165d75dec4b1f770d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 60 9.5E-18 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3406 c446075314f3a16165d75dec4b1f770d 298 Pfam PF03466 LysR substrate binding domain 87 289 1.6E-40 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_3406 c446075314f3a16165d75dec4b1f770d 298 SUPERFAMILY SSF53850 86 294 9.95E-42 T 18-10-2018 CH53_3406 c446075314f3a16165d75dec4b1f770d 298 Gene3D G3DSA:3.40.190.290 89 290 2.4E-59 T 18-10-2018 CH53_3406 c446075314f3a16165d75dec4b1f770d 298 Gene3D G3DSA:1.10.10.10 1 86 6.3E-26 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2758 96462584c0a97ed55ccb0efbc3e59c7b 113 PIRSF PIRSF034456 7 113 1.0E-55 T 18-10-2018 IPR017028 Uncharacterised conserved protein UCP034456 CH53_2758 96462584c0a97ed55ccb0efbc3e59c7b 113 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 31 109 7.8E-7 T 18-10-2018 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein CH53_1129 1d607605770bf255ef1aaea842231f8d 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.6E-5 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1129 1d607605770bf255ef1aaea842231f8d 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.6E-5 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1129 1d607605770bf255ef1aaea842231f8d 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.6E-5 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1129 1d607605770bf255ef1aaea842231f8d 308 Pfam PF03466 LysR substrate binding domain 89 293 1.5E-37 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_1129 1d607605770bf255ef1aaea842231f8d 308 Gene3D G3DSA:1.10.10.10 3 88 7.6E-27 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1129 1d607605770bf255ef1aaea842231f8d 308 SUPERFAMILY SSF46785 4 85 2.06E-21 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1129 1d607605770bf255ef1aaea842231f8d 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.7E-19 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1129 1d607605770bf255ef1aaea842231f8d 308 SUPERFAMILY SSF53850 89 298 1.81E-40 T 18-10-2018 CH53_1129 1d607605770bf255ef1aaea842231f8d 308 Gene3D G3DSA:3.40.190.290 91 294 4.8E-54 T 18-10-2018 CH53_2434 965104cd8ae7c33ceba50dc2a50afc77 454 SUPERFAMILY SSF51905 168 332 7.03E-10 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2434 965104cd8ae7c33ceba50dc2a50afc77 454 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 3 333 4.8E-111 T 18-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase CH53_2434 965104cd8ae7c33ceba50dc2a50afc77 454 SUPERFAMILY SSF51905 1 223 3.05E-18 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2434 965104cd8ae7c33ceba50dc2a50afc77 454 Gene3D G3DSA:3.50.50.60 1 421 1.3E-114 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 SUPERFAMILY SSF49373 889 967 1.41E-19 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 Pfam PF09134 Invasin, domain 3 449 567 9.3E-15 T 18-10-2018 IPR015217 Invasin, domain 3 CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 SUPERFAMILY SSF49373 680 769 1.63E-19 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 SUPERFAMILY SSF49373 447 563 9.16E-11 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 SUPERFAMILY SSF49373 766 858 2.55E-11 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 Gene3D G3DSA:2.40.160.160 102 346 2.6E-101 T 18-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 Pfam PF02369 Bacterial Ig-like domain (group 1) 681 763 2.0E-15 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 Pfam PF02369 Bacterial Ig-like domain (group 1) 577 661 7.0E-12 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 Gene3D G3DSA:2.60.40.10 446 567 1.0E-16 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 SMART SM00634 679 765 2.6E-16 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 SMART SM00634 771 866 2.0E-4 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 SMART SM00634 575 662 1.1E-8 T 18-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 SUPERFAMILY SSF49373 578 668 2.94E-18 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 Gene3D G3DSA:2.60.40.10 673 767 1.5E-21 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 Gene3D G3DSA:2.60.40.10 568 666 1.9E-18 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 Gene3D G3DSA:2.60.40.10 770 872 5.4E-11 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 Gene3D G3DSA:2.60.40.1080 883 967 1.1E-17 T 18-10-2018 CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 PRINTS PR01369 Intimin signature 66 81 1.5E-12 T 18-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 PRINTS PR01369 Intimin signature 219 238 1.5E-12 T 18-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 PRINTS PR01369 Intimin signature 287 306 1.5E-12 T 18-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 PRINTS PR01369 Intimin signature 191 206 1.5E-12 T 18-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 PRINTS PR01369 Intimin signature 374 386 1.5E-12 T 18-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CH53_1204 54c2941cba82ef0397f5451be9ae604b 1063 Pfam PF11924 Inverse autotransporter, beta-domain 65 339 7.3E-102 T 18-10-2018 IPR024519 Inverse autotransporter, beta-domain CH53_3955 5e718260af69c2df76bd1ef59f07fbfa 395 Pfam PF00155 Aminotransferase class I and II 30 381 1.3E-53 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_3955 5e718260af69c2df76bd1ef59f07fbfa 395 SUPERFAMILY SSF53383 1 384 1.01E-86 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_3955 5e718260af69c2df76bd1ef59f07fbfa 395 Gene3D G3DSA:3.90.1150.10 32 379 9.2E-125 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_3955 5e718260af69c2df76bd1ef59f07fbfa 395 Gene3D G3DSA:3.40.640.10 42 284 9.2E-125 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_3955 5e718260af69c2df76bd1ef59f07fbfa 395 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 384 1.1E-110 T 18-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 CH53_1470 58c42f57a3daae6651d63045c445eb25 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 2.5E-26 T 18-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1470 58c42f57a3daae6651d63045c445eb25 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 18-10-2018 IPR018038 Ribosomal protein L30, conserved site CH53_1470 58c42f57a3daae6651d63045c445eb25 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 8.8E-20 T 18-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CH53_1470 58c42f57a3daae6651d63045c445eb25 59 PIRSF PIRSF002211 1 59 3.5E-28 T 18-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1470 58c42f57a3daae6651d63045c445eb25 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.06 T 18-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1470 58c42f57a3daae6651d63045c445eb25 59 Gene3D G3DSA:3.30.1390.20 1 59 7.9E-27 T 18-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CH53_1470 58c42f57a3daae6651d63045c445eb25 59 SUPERFAMILY SSF55129 3 59 1.7E-21 T 18-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CH53_2860 c087ff4fdf606a2029a0bb0aae894255 434 Gene3D G3DSA:1.10.3120.10 116 417 4.3E-111 T 18-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 CH53_2860 c087ff4fdf606a2029a0bb0aae894255 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 4.3E-40 T 18-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CH53_2860 c087ff4fdf606a2029a0bb0aae894255 434 SUPERFAMILY SSF109998 248 429 1.31E-47 T 18-10-2018 IPR027304 Trigger factor/SurA domain superfamily CH53_2860 c087ff4fdf606a2029a0bb0aae894255 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.887 T 18-10-2018 IPR005215 Trigger factor GO:0015031 CH53_2860 c087ff4fdf606a2029a0bb0aae894255 434 TIGRFAM TIGR00115 tig: trigger factor 13 412 1.4E-143 T 18-10-2018 IPR005215 Trigger factor GO:0015031 CH53_2860 c087ff4fdf606a2029a0bb0aae894255 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 236 3.1E-14 T 18-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CH53_2860 c087ff4fdf606a2029a0bb0aae894255 434 PIRSF PIRSF003095 1 434 1.1E-129 T 18-10-2018 IPR005215 Trigger factor GO:0015031 CH53_2860 c087ff4fdf606a2029a0bb0aae894255 434 Gene3D G3DSA:3.10.50.40 150 246 4.3E-111 T 18-10-2018 CH53_2860 c087ff4fdf606a2029a0bb0aae894255 434 SUPERFAMILY SSF102735 1 131 3.01E-41 T 18-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 CH53_2860 c087ff4fdf606a2029a0bb0aae894255 434 Gene3D G3DSA:3.30.70.1050 1 115 3.4E-43 T 18-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 CH53_2860 c087ff4fdf606a2029a0bb0aae894255 434 SUPERFAMILY SSF54534 96 240 1.96E-37 T 18-10-2018 CH53_2860 c087ff4fdf606a2029a0bb0aae894255 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 6.8E-44 T 18-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CH53_2305 866108549c1853782abc07d92e2198a7 331 SUPERFAMILY SSF51735 2 152 2.86E-44 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2305 866108549c1853782abc07d92e2198a7 331 SUPERFAMILY SSF55347 126 292 2.78E-24 T 18-10-2018 CH53_2305 866108549c1853782abc07d92e2198a7 331 Gene3D G3DSA:3.40.50.720 1 134 6.6E-36 T 18-10-2018 CH53_2305 866108549c1853782abc07d92e2198a7 331 Gene3D G3DSA:3.30.360.10 135 325 9.3E-51 T 18-10-2018 CH53_2305 866108549c1853782abc07d92e2198a7 331 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 2.2E-25 T 18-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CH53_1620 f53140d9157d488a765319d8e0619516 66 SUPERFAMILY SSF55331 2 64 9.02E-23 T 18-10-2018 IPR014347 Tautomerase/MIF superfamily CH53_1620 f53140d9157d488a765319d8e0619516 66 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 64 1.3E-28 T 18-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 CH53_1620 f53140d9157d488a765319d8e0619516 66 Gene3D G3DSA:3.30.429.10 2 65 7.4E-27 T 18-10-2018 IPR014347 Tautomerase/MIF superfamily CH53_1620 f53140d9157d488a765319d8e0619516 66 Pfam PF01361 Tautomerase enzyme 2 61 2.9E-24 T 18-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CH53_117 56d972b586b7ab3f9355bd52332935a7 527 SUPERFAMILY SSF54211 291 482 1.33E-34 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_117 56d972b586b7ab3f9355bd52332935a7 527 Gene3D G3DSA:3.40.50.300 59 179 3.6E-13 T 18-10-2018 CH53_117 56d972b586b7ab3f9355bd52332935a7 527 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 377 452 3.5E-10 T 18-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CH53_117 56d972b586b7ab3f9355bd52332935a7 527 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 374 393 3.3E-11 T 18-10-2018 CH53_117 56d972b586b7ab3f9355bd52332935a7 527 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 434 452 3.3E-11 T 18-10-2018 CH53_117 56d972b586b7ab3f9355bd52332935a7 527 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 291 307 3.3E-11 T 18-10-2018 CH53_117 56d972b586b7ab3f9355bd52332935a7 527 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 404 423 3.3E-11 T 18-10-2018 CH53_117 56d972b586b7ab3f9355bd52332935a7 527 Gene3D G3DSA:3.30.230.10 267 507 1.7E-94 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH53_117 56d972b586b7ab3f9355bd52332935a7 527 Pfam PF13654 AAA domain 76 265 3.3E-20 T 18-10-2018 CH53_1983 100d995f86bf3a8c70e8e0724562be63 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 60 237 2.9E-73 T 18-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 CH53_1983 100d995f86bf3a8c70e8e0724562be63 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 58.823 T 18-10-2018 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 CH53_1983 100d995f86bf3a8c70e8e0724562be63 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 65 231 1.2E-52 T 18-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 CH53_643 9ad9394f7e1be06bb745f496ab8c32c9 175 SUPERFAMILY SSF47144 78 171 3.27E-25 T 18-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CH53_643 9ad9394f7e1be06bb745f496ab8c32c9 175 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 5.0E-53 T 18-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CH53_643 9ad9394f7e1be06bb745f496ab8c32c9 175 Gene3D G3DSA:1.10.287.110 1 79 2.3E-24 T 18-10-2018 IPR036869 Chaperone J-domain superfamily CH53_643 9ad9394f7e1be06bb745f496ab8c32c9 175 SMART SM00271 1 66 6.1E-10 T 18-10-2018 IPR001623 DnaJ domain CH53_643 9ad9394f7e1be06bb745f496ab8c32c9 175 Pfam PF00226 DnaJ domain 2 70 3.1E-7 T 18-10-2018 IPR001623 DnaJ domain CH53_643 9ad9394f7e1be06bb745f496ab8c32c9 175 SUPERFAMILY SSF46565 1 74 1.09E-18 T 18-10-2018 IPR036869 Chaperone J-domain superfamily CH53_643 9ad9394f7e1be06bb745f496ab8c32c9 175 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 163 8.4E-17 T 18-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CH53_643 9ad9394f7e1be06bb745f496ab8c32c9 175 Gene3D G3DSA:1.20.1280.20 80 171 3.3E-25 T 18-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CH53_643 9ad9394f7e1be06bb745f496ab8c32c9 175 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.63 T 18-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CH53_1535 3260aebe2a37a0d5abb47f68396f13e1 268 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 250 4.3E-79 T 18-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 CH53_1535 3260aebe2a37a0d5abb47f68396f13e1 268 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 18-10-2018 IPR024002 Formate/nitrite transporter, conserved site CH53_1535 3260aebe2a37a0d5abb47f68396f13e1 268 Pfam PF01226 Formate/nitrite transporter 21 247 5.6E-57 T 18-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 CH53_1535 3260aebe2a37a0d5abb47f68396f13e1 268 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 18-10-2018 IPR024002 Formate/nitrite transporter, conserved site CH53_1535 3260aebe2a37a0d5abb47f68396f13e1 268 Gene3D G3DSA:1.20.1080.10 1 259 6.8E-92 T 18-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CH53_3712 b1dfb5b113f6e1d371a938da6d6d9959 289 Gene3D G3DSA:3.40.50.150 110 289 9.3E-43 T 18-10-2018 CH53_3712 b1dfb5b113f6e1d371a938da6d6d9959 289 PIRSF PIRSF005215 1 289 1.6E-145 T 18-10-2018 IPR014431 Tellurite resistance methyltransferase, TehB type-2 CH53_3712 b1dfb5b113f6e1d371a938da6d6d9959 289 Pfam PF03848 Tellurite resistance protein TehB 93 285 1.8E-106 T 18-10-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain CH53_3712 b1dfb5b113f6e1d371a938da6d6d9959 289 SUPERFAMILY SSF53335 70 277 4.3E-32 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_3712 b1dfb5b113f6e1d371a938da6d6d9959 289 Pfam PF09313 Domain of unknown function (DUF1971) 11 91 5.6E-29 T 18-10-2018 IPR015392 Domain of unknown function DUF1971 CH53_3712 b1dfb5b113f6e1d371a938da6d6d9959 289 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 51 288 4.2E-110 T 18-10-2018 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 CH53_3712 b1dfb5b113f6e1d371a938da6d6d9959 289 SUPERFAMILY SSF51197 5 104 3.98E-35 T 18-10-2018 CH53_3712 b1dfb5b113f6e1d371a938da6d6d9959 289 Gene3D G3DSA:2.60.120.10 3 109 1.5E-40 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_1218 7f17611880851d30aba46c43386ce034 66 Gene3D G3DSA:1.10.238.160 5 63 2.1E-6 T 18-10-2018 CH53_1218 7f17611880851d30aba46c43386ce034 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 4 54 1.9E-21 T 18-10-2018 IPR010260 DNA-binding transcriptional activator AlpA CH53_3717 95572ace595d1278cc58891feda8e291 660 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 36 652 5.5E-279 T 18-10-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 CH53_3717 95572ace595d1278cc58891feda8e291 660 SUPERFAMILY SSF88713 53 421 2.22E-35 T 18-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CH53_3717 95572ace595d1278cc58891feda8e291 660 Gene3D G3DSA:3.20.20.80 295 659 6.6E-147 T 18-10-2018 CH53_3717 95572ace595d1278cc58891feda8e291 660 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 305 632 2.1E-150 T 18-10-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal CH53_3717 95572ace595d1278cc58891feda8e291 660 Pfam PF01522 Polysaccharide deacetylase 90 257 2.2E-28 T 18-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CH53_3717 95572ace595d1278cc58891feda8e291 660 Gene3D G3DSA:3.20.20.370 29 294 1.5E-78 T 18-10-2018 CH53_645 3fe6304556c3d10218ae6877b215bed5 128 Gene3D G3DSA:3.90.1010.10 1 128 1.6E-58 T 18-10-2018 CH53_645 3fe6304556c3d10218ae6877b215bed5 128 Pfam PF01592 NifU-like N terminal domain 2 126 1.7E-56 T 18-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CH53_645 3fe6304556c3d10218ae6877b215bed5 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.4E-68 T 18-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CH53_645 3fe6304556c3d10218ae6877b215bed5 128 SUPERFAMILY SSF82649 1 125 1.12E-47 T 18-10-2018 CH53_3934 0af2936730978b547006a6066d7ec798 772 Pfam PF13237 4Fe-4S dicluster domain 374 427 4.7E-10 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_3934 0af2936730978b547006a6066d7ec798 772 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_3934 0af2936730978b547006a6066d7ec798 772 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_3934 0af2936730978b547006a6066d7ec798 772 Gene3D G3DSA:3.40.50.11540 144 282 6.8E-11 T 18-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3934 0af2936730978b547006a6066d7ec798 772 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 1.6E-28 T 18-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain CH53_3934 0af2936730978b547006a6066d7ec798 772 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 742 251.477 T 18-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CH53_3934 0af2936730978b547006a6066d7ec798 772 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 1.3E-46 T 18-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3934 0af2936730978b547006a6066d7ec798 772 SUPERFAMILY SSF46548 336 444 9.59E-22 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CH53_3934 0af2936730978b547006a6066d7ec798 772 Gene3D G3DSA:3.30.70.20 371 446 1.6E-11 T 18-10-2018 CH53_3934 0af2936730978b547006a6066d7ec798 772 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 1.3E-179 T 18-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CH53_3934 0af2936730978b547006a6066d7ec798 772 Pfam PF10531 SLBB domain 296 344 2.8E-11 T 18-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3934 0af2936730978b547006a6066d7ec798 772 SUPERFAMILY SSF142019 94 303 8.89E-58 T 18-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_1166 ff8660ccf9a51b77052d0fc0c07d7294 469 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 310 2.5E-9 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_1166 ff8660ccf9a51b77052d0fc0c07d7294 469 SMART SM00304 195 247 2.6E-4 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_1166 ff8660ccf9a51b77052d0fc0c07d7294 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 448 3.6E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_1166 ff8660ccf9a51b77052d0fc0c07d7294 469 SUPERFAMILY SSF55874 303 465 1.17E-27 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1166 ff8660ccf9a51b77052d0fc0c07d7294 469 SUPERFAMILY SSF47384 231 311 3.92E-14 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_1166 ff8660ccf9a51b77052d0fc0c07d7294 469 Pfam PF08521 Two-component sensor kinase N-terminal 23 171 1.7E-42 T 18-10-2018 IPR013727 Two-component sensor kinase, N-terminal CH53_1166 ff8660ccf9a51b77052d0fc0c07d7294 469 Gene3D G3DSA:3.30.565.10 316 469 7.6E-26 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1166 ff8660ccf9a51b77052d0fc0c07d7294 469 SMART SM00387 356 469 7.8E-23 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_1166 ff8660ccf9a51b77052d0fc0c07d7294 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 3.7E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1166 ff8660ccf9a51b77052d0fc0c07d7294 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 3.7E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1166 ff8660ccf9a51b77052d0fc0c07d7294 469 SMART SM00388 248 313 8.1E-11 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_1166 ff8660ccf9a51b77052d0fc0c07d7294 469 Gene3D G3DSA:1.10.287.130 199 314 1.3E-16 T 18-10-2018 CH53_3520 9145e23e562e7b18cf70f17402df7f08 152 Pfam PF01037 Lrp/AsnC ligand binding domain 67 132 3.4E-11 T 18-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CH53_3520 9145e23e562e7b18cf70f17402df7f08 152 SUPERFAMILY SSF46785 1 61 1.12E-13 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3520 9145e23e562e7b18cf70f17402df7f08 152 SUPERFAMILY SSF54909 62 135 2.2E-13 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_3520 9145e23e562e7b18cf70f17402df7f08 152 Gene3D G3DSA:3.30.70.920 51 136 5.3E-17 T 18-10-2018 CH53_3520 9145e23e562e7b18cf70f17402df7f08 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 5.8E-13 T 18-10-2018 CH53_3520 9145e23e562e7b18cf70f17402df7f08 152 SMART SM00344 1 107 1.3E-23 T 18-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CH53_3520 9145e23e562e7b18cf70f17402df7f08 152 Gene3D G3DSA:1.10.10.10 1 50 1.8E-16 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3520 9145e23e562e7b18cf70f17402df7f08 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 6.2E-11 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_3520 9145e23e562e7b18cf70f17402df7f08 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 6.2E-11 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_3520 9145e23e562e7b18cf70f17402df7f08 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 6.2E-11 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_3878 9beed233ce0dddb11595439b33d40214 339 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 250 332 1.4E-23 T 18-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CH53_3878 9beed233ce0dddb11595439b33d40214 339 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 250 314 1.0E-20 T 18-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CH53_3878 9beed233ce0dddb11595439b33d40214 339 ProSitePatterns PS00211 ABC transporters family signature. 171 185 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3878 9beed233ce0dddb11595439b33d40214 339 Gene3D G3DSA:3.40.50.300 19 336 4.7E-95 T 18-10-2018 CH53_3878 9beed233ce0dddb11595439b33d40214 339 SUPERFAMILY SSF52540 51 314 3.0E-67 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3878 9beed233ce0dddb11595439b33d40214 339 SMART SM00382 50 256 4.3E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3878 9beed233ce0dddb11595439b33d40214 339 Pfam PF00005 ABC transporter 42 198 8.9E-28 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_556 ab49715f6e53b291a8aaaf916df91696 135 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 18 128 1.7E-46 T 18-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CH53_556 ab49715f6e53b291a8aaaf916df91696 135 SUPERFAMILY SSF48695 34 130 2.26E-41 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily CH53_556 ab49715f6e53b291a8aaaf916df91696 135 Gene3D G3DSA:1.10.1130.10 48 115 7.1E-30 T 18-10-2018 CH53_556 ab49715f6e53b291a8aaaf916df91696 135 PIRSF PIRSF006105 1 135 2.2E-52 T 18-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CH53_2081 10a29fe072ec4e47f3715ec46f0e7f21 319 Pfam PF08279 HTH domain 13 58 1.2E-10 T 18-10-2018 IPR013196 Helix-turn-helix, type 11 CH53_2081 10a29fe072ec4e47f3715ec46f0e7f21 319 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 3.4E-25 T 18-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CH53_2081 10a29fe072ec4e47f3715ec46f0e7f21 319 Pfam PF02237 Biotin protein ligase C terminal domain 272 317 4.7E-12 T 18-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CH53_2081 10a29fe072ec4e47f3715ec46f0e7f21 319 Gene3D G3DSA:1.10.10.10 1 64 8.7E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2081 10a29fe072ec4e47f3715ec46f0e7f21 319 Gene3D G3DSA:2.30.30.100 271 313 3.3E-23 T 18-10-2018 CH53_2081 10a29fe072ec4e47f3715ec46f0e7f21 319 SUPERFAMILY SSF55681 69 268 1.74E-59 T 18-10-2018 CH53_2081 10a29fe072ec4e47f3715ec46f0e7f21 319 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 73 2.9E-26 T 18-10-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 CH53_2081 10a29fe072ec4e47f3715ec46f0e7f21 319 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 3.4E-77 T 18-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CH53_2081 10a29fe072ec4e47f3715ec46f0e7f21 319 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.722 T 18-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 CH53_2081 10a29fe072ec4e47f3715ec46f0e7f21 319 SUPERFAMILY SSF50037 271 317 1.01E-11 T 18-10-2018 IPR008988 Transcriptional repressor, C-terminal CH53_2081 10a29fe072ec4e47f3715ec46f0e7f21 319 SUPERFAMILY SSF46785 7 60 5.92E-12 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2081 10a29fe072ec4e47f3715ec46f0e7f21 319 Gene3D G3DSA:3.30.930.10 65 270 6.6E-75 T 18-10-2018 CH53_3168 75f62df3a4b6e11aeb82ba0e10348d36 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 18-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 CH53_3168 75f62df3a4b6e11aeb82ba0e10348d36 250 Gene3D G3DSA:3.40.50.1240 2 250 1.8E-89 T 18-10-2018 IPR029033 Histidine phosphatase superfamily CH53_3168 75f62df3a4b6e11aeb82ba0e10348d36 250 SMART SM00855 5 191 9.2E-27 T 18-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CH53_3168 75f62df3a4b6e11aeb82ba0e10348d36 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 45.697 T 18-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CH53_3168 75f62df3a4b6e11aeb82ba0e10348d36 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 1.4E-125 T 18-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CH53_3168 75f62df3a4b6e11aeb82ba0e10348d36 250 SUPERFAMILY SSF53254 4 247 1.18E-76 T 18-10-2018 IPR029033 Histidine phosphatase superfamily CH53_3168 75f62df3a4b6e11aeb82ba0e10348d36 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 128 2.2E-29 T 18-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CH53_3168 75f62df3a4b6e11aeb82ba0e10348d36 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 139 227 1.0E-4 T 18-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CH53_3168 75f62df3a4b6e11aeb82ba0e10348d36 250 PIRSF PIRSF000709 168 239 0.036 T 18-10-2018 CH53_3168 75f62df3a4b6e11aeb82ba0e10348d36 250 PIRSF PIRSF000709 3 114 3.9E-8 T 18-10-2018 CH53_1338 287688b229177e55911b4c10816a0f22 101 SUPERFAMILY SSF50182 7 69 5.02E-24 T 18-10-2018 IPR010920 LSM domain superfamily CH53_1338 287688b229177e55911b4c10816a0f22 101 Pfam PF17209 Hfq protein 7 69 7.8E-31 T 18-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CH53_1338 287688b229177e55911b4c10816a0f22 101 Gene3D G3DSA:2.30.30.100 1 72 1.5E-34 T 18-10-2018 CH53_1338 287688b229177e55911b4c10816a0f22 101 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.8E-29 T 18-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CH53_1338 287688b229177e55911b4c10816a0f22 101 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.244 T 18-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CH53_2417 8b858249db2ca5463be291ac08c5ce9e 271 SUPERFAMILY SSF53613 21 265 2.76E-55 T 18-10-2018 IPR029056 Ribokinase-like CH53_2417 8b858249db2ca5463be291ac08c5ce9e 271 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 26 271 29.62 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CH53_2417 8b858249db2ca5463be291ac08c5ce9e 271 PIRSF PIRSF000513 18 271 8.6E-91 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CH53_2417 8b858249db2ca5463be291ac08c5ce9e 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 32 39 3.6E-39 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CH53_2417 8b858249db2ca5463be291ac08c5ce9e 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 45 66 3.6E-39 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CH53_2417 8b858249db2ca5463be291ac08c5ce9e 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 132 146 3.6E-39 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CH53_2417 8b858249db2ca5463be291ac08c5ce9e 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 76 84 3.6E-39 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CH53_2417 8b858249db2ca5463be291ac08c5ce9e 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 102 119 3.6E-39 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CH53_2417 8b858249db2ca5463be291ac08c5ce9e 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 176 193 3.6E-39 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CH53_2417 8b858249db2ca5463be291ac08c5ce9e 271 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 24 266 3.4E-85 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CH53_2417 8b858249db2ca5463be291ac08c5ce9e 271 Pfam PF02110 Hydroxyethylthiazole kinase family 24 266 4.9E-89 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CH53_2417 8b858249db2ca5463be291ac08c5ce9e 271 Gene3D G3DSA:3.40.1190.20 17 270 5.2E-86 T 18-10-2018 IPR029056 Ribokinase-like CH53_443 4a1485a59bf8769678768d5cde063662 406 Pfam PF14559 Tetratricopeptide repeat 175 242 2.8E-11 T 18-10-2018 CH53_443 4a1485a59bf8769678768d5cde063662 406 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 2 112 1.6E-30 T 18-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI CH53_443 4a1485a59bf8769678768d5cde063662 406 Gene3D G3DSA:1.25.40.10 152 292 1.5E-20 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_443 4a1485a59bf8769678768d5cde063662 406 SUPERFAMILY SSF48452 162 266 2.21E-18 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1055 3dbdf48b1f871033a8c9c6a78116b409 788 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 767 19.967 T 18-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 CH53_1055 3dbdf48b1f871033a8c9c6a78116b409 788 Pfam PF04453 Organic solvent tolerance protein 307 701 2.4E-106 T 18-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 CH53_1055 3dbdf48b1f871033a8c9c6a78116b409 788 Gene3D G3DSA:2.60.450.10 44 144 9.3E-7 T 18-10-2018 CH53_1055 3dbdf48b1f871033a8c9c6a78116b409 788 Pfam PF03968 OstA-like protein 53 193 3.2E-30 T 18-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal CH53_2736 f7faee1a61bb021335eb6587f13cba8a 319 SUPERFAMILY SSF52096 5 318 3.69E-105 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CH53_2736 f7faee1a61bb021335eb6587f13cba8a 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.966 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CH53_2736 f7faee1a61bb021335eb6587f13cba8a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.2E-50 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CH53_2736 f7faee1a61bb021335eb6587f13cba8a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.2E-50 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CH53_2736 f7faee1a61bb021335eb6587f13cba8a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.2E-50 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CH53_2736 f7faee1a61bb021335eb6587f13cba8a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.2E-50 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CH53_2736 f7faee1a61bb021335eb6587f13cba8a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.2E-50 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CH53_2736 f7faee1a61bb021335eb6587f13cba8a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.2E-50 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CH53_2736 f7faee1a61bb021335eb6587f13cba8a 319 Gene3D G3DSA:3.90.226.10 4 319 8.7E-123 T 18-10-2018 CH53_2736 f7faee1a61bb021335eb6587f13cba8a 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 3.8E-171 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CH53_2736 f7faee1a61bb021335eb6587f13cba8a 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 1.1E-63 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CH53_846 cc827f434b1266ffe0a954b1827391c3 236 SMART SM00420 5 57 4.2E-21 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_846 cc827f434b1266ffe0a954b1827391c3 236 SUPERFAMILY SSF46785 3 58 1.02E-14 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_846 cc827f434b1266ffe0a954b1827391c3 236 Pfam PF08220 DeoR-like helix-turn-helix domain 5 60 8.7E-22 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_846 cc827f434b1266ffe0a954b1827391c3 236 Gene3D G3DSA:1.10.10.10 1 56 6.6E-10 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_846 cc827f434b1266ffe0a954b1827391c3 236 Pfam PF00455 DeoR C terminal sensor domain 76 231 9.7E-42 T 18-10-2018 IPR014036 DeoR C-terminal sensor domain CH53_846 cc827f434b1266ffe0a954b1827391c3 236 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 18-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CH53_846 cc827f434b1266ffe0a954b1827391c3 236 SUPERFAMILY SSF100950 76 233 7.53E-28 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_846 cc827f434b1266ffe0a954b1827391c3 236 SMART SM01134 74 234 1.8E-46 T 18-10-2018 CH53_846 cc827f434b1266ffe0a954b1827391c3 236 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 1.6E-10 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_846 cc827f434b1266ffe0a954b1827391c3 236 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 1.6E-10 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_1829 e0daf9a78ac787c3fe8b9e97becee87e 561 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 327 342 - T 18-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site CH53_1829 e0daf9a78ac787c3fe8b9e97becee87e 561 SUPERFAMILY SSF50249 314 395 2.91E-19 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_1829 e0daf9a78ac787c3fe8b9e97becee87e 561 Gene3D G3DSA:2.40.50.140 314 400 7.9E-14 T 18-10-2018 CH53_1829 e0daf9a78ac787c3fe8b9e97becee87e 561 SUPERFAMILY SSF56091 30 312 2.08E-68 T 18-10-2018 CH53_1829 e0daf9a78ac787c3fe8b9e97becee87e 561 SUPERFAMILY SSF47781 404 558 7.78E-25 T 18-10-2018 IPR010994 RuvA domain 2-like CH53_1829 e0daf9a78ac787c3fe8b9e97becee87e 561 Gene3D G3DSA:3.30.470.90 95 313 1.1E-30 T 18-10-2018 CH53_1829 e0daf9a78ac787c3fe8b9e97becee87e 561 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 318 393 3.0E-17 T 18-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CH53_1829 e0daf9a78ac787c3fe8b9e97becee87e 561 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 35 314 2.5E-23 T 18-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CH53_1829 e0daf9a78ac787c3fe8b9e97becee87e 561 SMART SM00532 34 433 1.9E-52 T 18-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CH53_1829 e0daf9a78ac787c3fe8b9e97becee87e 561 Hamap MF_01587 DNA ligase B [ligB]. 1 561 51.959 T 18-10-2018 IPR020923 DNA ligase B GO:0003911|GO:0006259 CH53_1695 42ff920faaddea98efa6440952d518ef 689 SUPERFAMILY SSF109604 339 538 9.94E-16 T 18-10-2018 CH53_1695 42ff920faaddea98efa6440952d518ef 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.65 T 18-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_1695 42ff920faaddea98efa6440952d518ef 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 1.8E-210 T 18-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_1695 42ff920faaddea98efa6440952d518ef 689 Pfam PF05746 DALR anticodon binding domain 582 679 3.3E-8 T 18-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CH53_1695 42ff920faaddea98efa6440952d518ef 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 6.5E-37 T 18-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_1695 42ff920faaddea98efa6440952d518ef 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 6.5E-37 T 18-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_1695 42ff920faaddea98efa6440952d518ef 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 6.5E-37 T 18-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_1695 42ff920faaddea98efa6440952d518ef 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 6.5E-37 T 18-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_1695 42ff920faaddea98efa6440952d518ef 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 6.5E-37 T 18-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_1695 42ff920faaddea98efa6440952d518ef 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 18-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_4259 4c7377cdbdbbc95c39ce28ea1a1e7074 110 Pfam PF07883 Cupin domain 35 92 9.9E-10 T 18-10-2018 IPR013096 Cupin 2, conserved barrel CH53_4259 4c7377cdbdbbc95c39ce28ea1a1e7074 110 PIRSF PIRSF029883 3 110 3.6E-29 T 18-10-2018 IPR025499 Pectin degradation protein KdgF CH53_4259 4c7377cdbdbbc95c39ce28ea1a1e7074 110 SUPERFAMILY SSF51182 8 109 2.89E-18 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_4259 4c7377cdbdbbc95c39ce28ea1a1e7074 110 Gene3D G3DSA:2.60.120.10 1 110 3.6E-33 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_587 267ee70f0c0fc30be0ea350a59cb8925 181 Gene3D G3DSA:3.40.630.30 5 174 5.5E-50 T 18-10-2018 CH53_587 267ee70f0c0fc30be0ea350a59cb8925 181 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 2.3E-21 T 18-10-2018 IPR000182 GNAT domain CH53_587 267ee70f0c0fc30be0ea350a59cb8925 181 SUPERFAMILY SSF55729 3 164 1.67E-40 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_4305 bbe58bc81e59f4e79a37f4a266cdd2bc 519 SMART SM00052 263 506 3.5E-52 T 18-10-2018 IPR001633 EAL domain CH53_4305 bbe58bc81e59f4e79a37f4a266cdd2bc 519 Pfam PF12792 CSS motif domain associated with EAL 36 234 1.7E-20 T 18-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CH53_4305 bbe58bc81e59f4e79a37f4a266cdd2bc 519 SUPERFAMILY SSF141868 270 513 8.24E-64 T 18-10-2018 IPR035919 EAL domain superfamily CH53_4305 bbe58bc81e59f4e79a37f4a266cdd2bc 519 Gene3D G3DSA:3.20.20.450 262 515 9.7E-65 T 18-10-2018 IPR035919 EAL domain superfamily CH53_4305 bbe58bc81e59f4e79a37f4a266cdd2bc 519 Pfam PF00563 EAL domain 269 500 1.2E-52 T 18-10-2018 IPR001633 EAL domain CH53_991 bca1320882333882d2bdf9ea444b8893 770 Gene3D G3DSA:2.170.130.10 54 198 2.2E-41 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CH53_991 bca1320882333882d2bdf9ea444b8893 770 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 753 770 - T 18-10-2018 IPR010917 TonB-dependent receptor, conserved site CH53_991 bca1320882333882d2bdf9ea444b8893 770 Gene3D G3DSA:2.40.170.20 204 770 2.7E-219 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH53_991 bca1320882333882d2bdf9ea444b8893 770 Pfam PF00593 TonB dependent receptor 290 768 1.2E-49 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CH53_991 bca1320882333882d2bdf9ea444b8893 770 SUPERFAMILY SSF56935 64 770 1.5E-127 T 18-10-2018 CH53_991 bca1320882333882d2bdf9ea444b8893 770 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 80 770 1.6E-104 T 18-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CH53_991 bca1320882333882d2bdf9ea444b8893 770 Pfam PF07715 TonB-dependent Receptor Plug Domain 80 193 6.1E-27 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain CH53_991 bca1320882333882d2bdf9ea444b8893 770 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 71 - T 18-10-2018 IPR010916 TonB box, conserved site CH53_839 085fac9b693c4050591564d432b9071a 814 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 731 758 - T 18-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CH53_839 085fac9b693c4050591564d432b9071a 814 Pfam PF01568 Molydopterin dinucleotide binding domain 695 806 1.7E-27 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CH53_839 085fac9b693c4050591564d432b9071a 814 Gene3D G3DSA:3.40.50.740 428 625 1.7E-51 T 18-10-2018 CH53_839 085fac9b693c4050591564d432b9071a 814 Pfam PF00384 Molybdopterin oxidoreductase 119 576 9.2E-108 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_839 085fac9b693c4050591564d432b9071a 814 SMART SM00926 56 116 2.0E-9 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_839 085fac9b693c4050591564d432b9071a 814 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 57 116 3.5E-16 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_839 085fac9b693c4050591564d432b9071a 814 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 814 0.0 T 18-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 CH53_839 085fac9b693c4050591564d432b9071a 814 Gene3D G3DSA:3.40.50.740 54 322 5.7E-87 T 18-10-2018 CH53_839 085fac9b693c4050591564d432b9071a 814 Gene3D G3DSA:2.40.40.20 670 814 9.0E-43 T 18-10-2018 CH53_839 085fac9b693c4050591564d432b9071a 814 Gene3D G3DSA:3.40.228.10 346 420 3.1E-18 T 18-10-2018 CH53_839 085fac9b693c4050591564d432b9071a 814 SUPERFAMILY SSF50692 641 814 1.2E-38 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CH53_839 085fac9b693c4050591564d432b9071a 814 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 61 79 - T 18-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 CH53_839 085fac9b693c4050591564d432b9071a 814 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 517 534 - T 18-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CH53_839 085fac9b693c4050591564d432b9071a 814 SUPERFAMILY SSF53706 57 697 1.15E-176 T 18-10-2018 CH53_1809 5352fbad76cbcb1a1e646186856027b1 469 SMART SM01230 102 379 4.2E-148 T 18-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CH53_1809 5352fbad76cbcb1a1e646186856027b1 469 SUPERFAMILY SSF55931 102 468 2.75E-137 T 18-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CH53_1809 5352fbad76cbcb1a1e646186856027b1 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 18-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CH53_1809 5352fbad76cbcb1a1e646186856027b1 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 2.5E-137 T 18-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CH53_1809 5352fbad76cbcb1a1e646186856027b1 469 SUPERFAMILY SSF54368 3 99 2.22E-36 T 18-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CH53_1809 5352fbad76cbcb1a1e646186856027b1 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 18-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CH53_1809 5352fbad76cbcb1a1e646186856027b1 469 Gene3D G3DSA:3.30.590.10 105 457 3.0E-149 T 18-10-2018 CH53_1809 5352fbad76cbcb1a1e646186856027b1 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 4.9E-32 T 18-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CH53_1809 5352fbad76cbcb1a1e646186856027b1 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 18-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CH53_1809 5352fbad76cbcb1a1e646186856027b1 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 7.0E-215 T 18-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CH53_1809 5352fbad76cbcb1a1e646186856027b1 469 Gene3D G3DSA:3.10.20.70 2 104 1.5E-41 T 18-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CH53_1409 473c5badb31aaadaec96d0ecaf87d5a8 216 Pfam PF00813 FliP family 13 211 6.4E-65 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_1409 473c5badb31aaadaec96d0ecaf87d5a8 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 2.0E-84 T 18-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 CH53_1409 473c5badb31aaadaec96d0ecaf87d5a8 216 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_1409 473c5badb31aaadaec96d0ecaf87d5a8 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_1409 473c5badb31aaadaec96d0ecaf87d5a8 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 2.5E-68 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_1409 473c5badb31aaadaec96d0ecaf87d5a8 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 2.5E-68 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_1409 473c5badb31aaadaec96d0ecaf87d5a8 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 2.5E-68 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_1409 473c5badb31aaadaec96d0ecaf87d5a8 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 2.5E-68 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_1409 473c5badb31aaadaec96d0ecaf87d5a8 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 2.5E-68 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_1409 473c5badb31aaadaec96d0ecaf87d5a8 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 2.5E-68 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_1799 072c1a3c76422ca14c83ae635afdb4d6 196 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 5 185 5.3E-71 T 18-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CH53_1799 072c1a3c76422ca14c83ae635afdb4d6 196 SUPERFAMILY SSF53448 1 189 1.95E-35 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_1799 072c1a3c76422ca14c83ae635afdb4d6 196 Pfam PF12804 MobA-like NTP transferase domain 7 156 6.7E-36 T 18-10-2018 IPR025877 MobA-like NTP transferase CH53_1799 072c1a3c76422ca14c83ae635afdb4d6 196 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 3 188 30.444 T 18-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CH53_1799 072c1a3c76422ca14c83ae635afdb4d6 196 Gene3D G3DSA:3.90.550.10 2 193 3.5E-58 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_4268 5c7019a09b8866cb7da75553b1d7a0e1 182 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 163 1.6E-36 T 18-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CH53_4268 5c7019a09b8866cb7da75553b1d7a0e1 182 PIRSF PIRSF030780 1 182 3.1E-103 T 18-10-2018 IPR016956 Inner membrane protein YdjM CH53_1088 aff0b30d35a2841b3d2eb46d1396fa88 238 Pfam PF00072 Response regulator receiver domain 6 113 2.6E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1088 aff0b30d35a2841b3d2eb46d1396fa88 238 SUPERFAMILY SSF52172 2 125 1.32E-35 T 18-10-2018 IPR011006 CheY-like superfamily CH53_1088 aff0b30d35a2841b3d2eb46d1396fa88 238 SMART SM00862 156 232 2.1E-14 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_1088 aff0b30d35a2841b3d2eb46d1396fa88 238 Gene3D G3DSA:1.10.10.10 126 236 1.1E-25 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1088 aff0b30d35a2841b3d2eb46d1396fa88 238 Gene3D G3DSA:3.40.50.2300 1 123 8.7E-33 T 18-10-2018 CH53_1088 aff0b30d35a2841b3d2eb46d1396fa88 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 7.3E-18 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_1088 aff0b30d35a2841b3d2eb46d1396fa88 238 SUPERFAMILY SSF46894 137 234 2.72E-21 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_1088 aff0b30d35a2841b3d2eb46d1396fa88 238 SMART SM00448 4 114 2.6E-38 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 Gene3D G3DSA:1.25.40.10 355 460 1.0E-10 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 SUPERFAMILY SSF48452 75 435 4.87E-17 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 Gene3D G3DSA:1.25.40.10 463 561 6.9E-11 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 SUPERFAMILY SSF48452 471 665 1.02E-16 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 Pfam PF13432 Tetratricopeptide repeat 471 533 1.7E-5 T 18-10-2018 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 Pfam PF13432 Tetratricopeptide repeat 361 422 0.0036 T 18-10-2018 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 Gene3D G3DSA:1.25.40.10 239 354 3.0E-8 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 Gene3D G3DSA:1.25.40.10 41 238 5.0E-8 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 PRINTS PR01441 Cellulose synthase subunit C signature 151 163 1.2E-6 T 18-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 PRINTS PR01441 Cellulose synthase subunit C signature 215 237 1.2E-6 T 18-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 PRINTS PR01441 Cellulose synthase subunit C signature 563 584 1.2E-6 T 18-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 PRINTS PR01441 Cellulose synthase subunit C signature 498 518 1.2E-6 T 18-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 SMART SM00028 465 498 0.59 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 SMART SM00028 307 340 2.3 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 SMART SM00028 499 532 360.0 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 SMART SM00028 389 422 0.018 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 807 1139 5.6E-123 T 18-10-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 Gene3D G3DSA:1.25.40.10 566 787 1.9E-11 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 Pfam PF14559 Tetratricopeptide repeat 290 339 1.2E-6 T 18-10-2018 CH53_1632 6a122106d4858ee89703eb1b4d77b7a3 1160 Pfam PF14559 Tetratricopeptide repeat 617 671 3.2E-8 T 18-10-2018 CH53_2234 fc8f188b0413bd53526f603c3d300dd1 553 Pfam PF00128 Alpha amylase, catalytic domain 30 372 3.5E-122 T 18-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CH53_2234 fc8f188b0413bd53526f603c3d300dd1 553 Gene3D G3DSA:2.60.40.1180 476 550 4.7E-16 T 18-10-2018 IPR013780 Glycosyl hydrolase, all-beta CH53_2234 fc8f188b0413bd53526f603c3d300dd1 553 Gene3D G3DSA:3.20.20.80 2 110 5.0E-48 T 18-10-2018 CH53_2234 fc8f188b0413bd53526f603c3d300dd1 553 SUPERFAMILY SSF51011 475 551 1.66E-17 T 18-10-2018 CH53_2234 fc8f188b0413bd53526f603c3d300dd1 553 Gene3D G3DSA:3.20.20.80 172 475 1.4E-109 T 18-10-2018 CH53_2234 fc8f188b0413bd53526f603c3d300dd1 553 SMART SM00642 15 414 1.4E-155 T 18-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CH53_2234 fc8f188b0413bd53526f603c3d300dd1 553 Pfam PF11941 Domain of unknown function (DUF3459) 459 534 3.3E-6 T 18-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) CH53_2234 fc8f188b0413bd53526f603c3d300dd1 553 Gene3D G3DSA:3.90.400.10 111 171 3.5E-26 T 18-10-2018 CH53_2234 fc8f188b0413bd53526f603c3d300dd1 553 SUPERFAMILY SSF51445 5 472 3.39E-153 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_2234 fc8f188b0413bd53526f603c3d300dd1 553 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 550 2.2E-251 T 18-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 CH53_598 7e79b0c2675f246caa78128ad2997080 450 Pfam PF00012 Hsp70 protein 3 228 1.3E-13 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_598 7e79b0c2675f246caa78128ad2997080 450 SUPERFAMILY SSF53067 208 447 5.8E-31 T 18-10-2018 CH53_598 7e79b0c2675f246caa78128ad2997080 450 Gene3D G3DSA:3.90.640.10 330 384 1.9E-11 T 18-10-2018 CH53_598 7e79b0c2675f246caa78128ad2997080 450 SUPERFAMILY SSF53067 1 204 1.94E-25 T 18-10-2018 CH53_598 7e79b0c2675f246caa78128ad2997080 450 Gene3D G3DSA:3.30.420.40 385 429 1.9E-11 T 18-10-2018 CH53_598 7e79b0c2675f246caa78128ad2997080 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 18-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CH53_2344 bdcd5e10e64b55f29554df9e4a17db1a 210 SUPERFAMILY SSF55811 9 205 4.33E-50 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CH53_2344 bdcd5e10e64b55f29554df9e4a17db1a 210 Pfam PF00293 NUDIX domain 59 179 4.5E-12 T 18-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CH53_2344 bdcd5e10e64b55f29554df9e4a17db1a 210 Gene3D G3DSA:3.90.79.10 3 209 1.0E-65 T 18-10-2018 CH53_2344 bdcd5e10e64b55f29554df9e4a17db1a 210 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 1.1E-75 T 18-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CH53_2344 bdcd5e10e64b55f29554df9e4a17db1a 210 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 18-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CH53_2064 b0c5d2677f8fd0b254852a8566093eae 259 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 5.4E-78 T 18-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CH53_2064 b0c5d2677f8fd0b254852a8566093eae 259 ProSitePatterns PS01218 TatC family signature. 154 173 - T 18-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site CH53_2064 b0c5d2677f8fd0b254852a8566093eae 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 3.3E-50 T 18-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CH53_2064 b0c5d2677f8fd0b254852a8566093eae 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 3.3E-50 T 18-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CH53_2064 b0c5d2677f8fd0b254852a8566093eae 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 3.3E-50 T 18-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CH53_2064 b0c5d2677f8fd0b254852a8566093eae 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 3.3E-50 T 18-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CH53_2064 b0c5d2677f8fd0b254852a8566093eae 259 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 7 241 15.916 T 18-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CH53_2064 b0c5d2677f8fd0b254852a8566093eae 259 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 4.0E-64 T 18-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CH53_277 f48e8d86c734bca1c3dedac4e4139b06 246 Pfam PF01380 SIS domain 109 222 9.8E-17 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_277 f48e8d86c734bca1c3dedac4e4139b06 246 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 67 9.1E-15 T 18-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CH53_277 f48e8d86c734bca1c3dedac4e4139b06 246 Gene3D G3DSA:3.40.50.10490 79 244 1.3E-30 T 18-10-2018 CH53_277 f48e8d86c734bca1c3dedac4e4139b06 246 SUPERFAMILY SSF46689 7 72 3.76E-20 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_277 f48e8d86c734bca1c3dedac4e4139b06 246 SUPERFAMILY SSF53697 86 230 5.15E-31 T 18-10-2018 CH53_277 f48e8d86c734bca1c3dedac4e4139b06 246 Gene3D G3DSA:1.10.10.10 4 71 3.7E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4188 a9ab945205ed82987cf35f9d08ba2d57 120 SUPERFAMILY SSF103084 1 117 1.83E-31 T 18-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 CH53_4188 a9ab945205ed82987cf35f9d08ba2d57 120 Pfam PF05866 Endodeoxyribonuclease RusA 9 114 2.6E-20 T 18-10-2018 IPR008822 Holliday junction resolvase RusA-like GO:0000287|GO:0006281|GO:0006310 CH53_4188 a9ab945205ed82987cf35f9d08ba2d57 120 PIRSF PIRSF001007 1 120 2.9E-48 T 18-10-2018 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 CH53_4188 a9ab945205ed82987cf35f9d08ba2d57 120 Gene3D G3DSA:3.30.1330.70 1 120 2.6E-45 T 18-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 CH53_3042 d8e224c6fedd827398fcb5aa1bffdf60 151 PIRSF PIRSF005384 2 147 1.3E-58 T 18-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CH53_3042 d8e224c6fedd827398fcb5aa1bffdf60 151 SUPERFAMILY SSF89623 3 145 1.57E-57 T 18-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CH53_3042 d8e224c6fedd827398fcb5aa1bffdf60 151 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 4 145 1.6E-70 T 18-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 CH53_3042 d8e224c6fedd827398fcb5aa1bffdf60 151 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 146 3.7E-61 T 18-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CH53_3042 d8e224c6fedd827398fcb5aa1bffdf60 151 Pfam PF02502 Ribose/Galactose Isomerase 4 141 2.8E-55 T 18-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CH53_3042 d8e224c6fedd827398fcb5aa1bffdf60 151 Gene3D G3DSA:3.40.1400.10 1 149 1.8E-60 T 18-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CH53_3303 420454b25fdc1b55b2fb0170a8554376 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 2.3E-70 T 18-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 CH53_3303 420454b25fdc1b55b2fb0170a8554376 193 Gene3D G3DSA:2.70.40.10 1 162 3.7E-52 T 18-10-2018 IPR036157 dUTPase-like superfamily CH53_3303 420454b25fdc1b55b2fb0170a8554376 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 35.067 T 18-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 CH53_3303 420454b25fdc1b55b2fb0170a8554376 193 Pfam PF00692 dUTPase 79 185 1.5E-10 T 18-10-2018 IPR029054 dUTPase-like CH53_3303 420454b25fdc1b55b2fb0170a8554376 193 SUPERFAMILY SSF51283 1 193 9.28E-62 T 18-10-2018 IPR036157 dUTPase-like superfamily CH53_3037 a48b9fb65e0fd78eef718b3e7ba7fbbe 228 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 2 203 3.3E-65 T 18-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CH53_3037 a48b9fb65e0fd78eef718b3e7ba7fbbe 228 SUPERFAMILY SSF51366 1 213 1.93E-58 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CH53_3037 a48b9fb65e0fd78eef718b3e7ba7fbbe 228 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 29 43 - T 18-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CH53_3037 a48b9fb65e0fd78eef718b3e7ba7fbbe 228 Pfam PF00834 Ribulose-phosphate 3 epimerase family 2 197 2.6E-62 T 18-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CH53_3037 a48b9fb65e0fd78eef718b3e7ba7fbbe 228 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 132 154 - T 18-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CH53_3037 a48b9fb65e0fd78eef718b3e7ba7fbbe 228 Gene3D G3DSA:3.20.20.70 1 228 1.3E-83 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_375 d1245cbc9b0ae4c09b9099465209942b 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 7 147 26.945 T 18-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_375 d1245cbc9b0ae4c09b9099465209942b 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 6.7E-12 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_375 d1245cbc9b0ae4c09b9099465209942b 180 Gene3D G3DSA:3.30.70.3270 33 177 3.7E-43 T 18-10-2018 CH53_375 d1245cbc9b0ae4c09b9099465209942b 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_375 d1245cbc9b0ae4c09b9099465209942b 180 SUPERFAMILY SSF54862 33 159 1.8E-29 T 18-10-2018 CH53_375 d1245cbc9b0ae4c09b9099465209942b 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 2.0E-51 T 18-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_2177 f99b88384586a9989d09968661eda2fb 328 Gene3D G3DSA:3.40.50.2300 31 300 4.3E-93 T 18-10-2018 CH53_2177 f99b88384586a9989d09968661eda2fb 328 Pfam PF13407 Periplasmic binding protein domain 31 288 1.6E-53 T 18-10-2018 IPR025997 Periplasmic binding protein CH53_2177 f99b88384586a9989d09968661eda2fb 328 SUPERFAMILY SSF53822 27 326 1.5E-65 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_2177 f99b88384586a9989d09968661eda2fb 328 Gene3D G3DSA:3.40.50.2300 130 267 4.3E-93 T 18-10-2018 CH53_1382 b37dab2df361aa915bcf50b9857ca399 443 Gene3D G3DSA:3.40.50.12170 24 443 5.0E-100 T 18-10-2018 CH53_1382 b37dab2df361aa915bcf50b9857ca399 443 PIRSF PIRSF016719 2 321 1.3E-68 T 18-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 CH53_1382 b37dab2df361aa915bcf50b9857ca399 443 PIRSF PIRSF016719 376 443 240.0 T 18-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 CH53_1382 b37dab2df361aa915bcf50b9857ca399 443 Pfam PF07075 Protein of unknown function (DUF1343) 47 442 1.2E-99 T 18-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 CH53_3541 b9c54fb4b13d841d710b6081ee048879 349 Pfam PF00072 Response regulator receiver domain 6 109 3.8E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3541 b9c54fb4b13d841d710b6081ee048879 349 SUPERFAMILY SSF52738 156 343 2.48E-76 T 18-10-2018 IPR035909 Methylesterase CheB, C-terminal CH53_3541 b9c54fb4b13d841d710b6081ee048879 349 SMART SM00448 4 119 2.1E-21 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3541 b9c54fb4b13d841d710b6081ee048879 349 PIRSF PIRSF000876 1 346 3.0E-138 T 18-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CH53_3541 b9c54fb4b13d841d710b6081ee048879 349 Gene3D G3DSA:3.40.50.180 148 349 1.7E-84 T 18-10-2018 IPR035909 Methylesterase CheB, C-terminal CH53_3541 b9c54fb4b13d841d710b6081ee048879 349 Pfam PF01339 CheB methylesterase 159 336 6.5E-63 T 18-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CH53_3541 b9c54fb4b13d841d710b6081ee048879 349 SUPERFAMILY SSF52172 1 108 1.99E-27 T 18-10-2018 IPR011006 CheY-like superfamily CH53_3541 b9c54fb4b13d841d710b6081ee048879 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 41.447 T 18-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CH53_3541 b9c54fb4b13d841d710b6081ee048879 349 Gene3D G3DSA:3.40.50.2300 1 133 9.3E-31 T 18-10-2018 CH53_2174 0fd673e724ee943a56f9e744eecdf2a6 341 Gene3D G3DSA:3.40.190.10 26 255 2.3E-52 T 18-10-2018 CH53_2174 0fd673e724ee943a56f9e744eecdf2a6 341 SUPERFAMILY SSF53850 27 257 2.17E-48 T 18-10-2018 CH53_2174 0fd673e724ee943a56f9e744eecdf2a6 341 SMART SM00062 36 265 4.9E-57 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_2174 0fd673e724ee943a56f9e744eecdf2a6 341 Gene3D G3DSA:3.40.190.10 128 223 2.3E-52 T 18-10-2018 CH53_2174 0fd673e724ee943a56f9e744eecdf2a6 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 1.4E-31 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_2174 0fd673e724ee943a56f9e744eecdf2a6 341 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 18-10-2018 IPR018313 Solute-binding protein family 3, conserved site CH53_2783 d3a3c16bcf8612216a379db11dc5cdeb 815 Gene3D G3DSA:2.40.110.10 236 359 4.2E-100 T 18-10-2018 CH53_2783 d3a3c16bcf8612216a379db11dc5cdeb 815 Gene3D G3DSA:1.20.140.10 360 507 4.2E-100 T 18-10-2018 CH53_2783 d3a3c16bcf8612216a379db11dc5cdeb 815 Gene3D G3DSA:1.10.540.10 122 235 4.2E-100 T 18-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CH53_2783 d3a3c16bcf8612216a379db11dc5cdeb 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 507 1.2E-10 T 18-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CH53_2783 d3a3c16bcf8612216a379db11dc5cdeb 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 233 1.8E-16 T 18-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CH53_2783 d3a3c16bcf8612216a379db11dc5cdeb 815 SUPERFAMILY SSF47203 360 507 5.8E-20 T 18-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CH53_2783 d3a3c16bcf8612216a379db11dc5cdeb 815 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 3.8E-116 T 18-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 CH53_2783 d3a3c16bcf8612216a379db11dc5cdeb 815 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 9.0E-9 T 18-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CH53_2783 d3a3c16bcf8612216a379db11dc5cdeb 815 SUPERFAMILY SSF56645 119 355 6.02E-46 T 18-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 3.4E-27 T 18-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Gene3D G3DSA:2.40.50.150 833 955 3.1E-44 T 18-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Gene3D G3DSA:3.90.1100.10 442 624 1.9E-70 T 18-10-2018 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Gene3D G3DSA:3.90.1100.10 19 156 2.6E-49 T 18-10-2018 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 240 5.1E-7 T 18-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 340 454 3.4E-16 T 18-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.318 T 18-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Gene3D G3DSA:2.40.270.10 1009 1242 2.1E-92 T 18-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 6.5E-27 T 18-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 18-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 18-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 3.0E-160 T 18-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Gene3D G3DSA:3.90.1110.10 317 441 3.4E-36 T 18-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.2E-57 T 18-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Gene3D G3DSA:2.40.270.10 790 832 5.4E-7 T 18-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Gene3D G3DSA:2.40.50.100 714 788 6.9E-32 T 18-10-2018 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Gene3D G3DSA:3.90.1100.10 643 713 5.4E-21 T 18-10-2018 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.5E-30 T 18-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Gene3D G3DSA:3.90.1800.10 1252 1306 8.1E-11 T 18-10-2018 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 SUPERFAMILY SSF64484 11 1340 0.0 T 18-10-2018 CH53_2095 d1cbb5e614f08015a2c57db0b9ec0574 1342 Gene3D G3DSA:3.90.1110.10 157 271 7.2E-28 T 18-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_4348 fabdf69edd75c5fe5981d259d0c266d3 85 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 59 19.818 T 18-10-2018 IPR005371 Uncharacterised protein family UPF0181 CH53_4348 fabdf69edd75c5fe5981d259d0c266d3 85 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 48 7.6E-27 T 18-10-2018 IPR005371 Uncharacterised protein family UPF0181 CH53_4348 fabdf69edd75c5fe5981d259d0c266d3 85 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 46 3.0E-19 T 18-10-2018 IPR005371 Uncharacterised protein family UPF0181 CH53_4310 29dc7dea01d819a7dbb1f12af7c1f2fd 152 SMART SM01321 11 129 1.2E-37 T 18-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CH53_4310 29dc7dea01d819a7dbb1f12af7c1f2fd 152 Pfam PF01797 Transposase IS200 like 12 129 9.5E-36 T 18-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CH53_4310 29dc7dea01d819a7dbb1f12af7c1f2fd 152 Gene3D G3DSA:3.30.70.1290 3 136 1.0E-40 T 18-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 CH53_4310 29dc7dea01d819a7dbb1f12af7c1f2fd 152 SUPERFAMILY SSF143422 1 129 1.83E-46 T 18-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 CH53_2034 e70dbc3afdc9fdfd451a56aa6aa8916a 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 9.6E-65 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_544 2b5582b9d3beceeb29165c0e2339cf9f 345 Pfam PF13531 Bacterial extracellular solute-binding protein 47 293 3.1E-42 T 18-10-2018 CH53_544 2b5582b9d3beceeb29165c0e2339cf9f 345 Gene3D G3DSA:3.40.190.10 127 338 5.4E-122 T 18-10-2018 CH53_544 2b5582b9d3beceeb29165c0e2339cf9f 345 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 28 339 7.2E-158 T 18-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CH53_544 2b5582b9d3beceeb29165c0e2339cf9f 345 SUPERFAMILY SSF53850 32 339 2.31E-78 T 18-10-2018 CH53_544 2b5582b9d3beceeb29165c0e2339cf9f 345 Gene3D G3DSA:3.40.190.10 39 308 5.4E-122 T 18-10-2018 CH53_364 a752140dc9f251b06c040db5ae5e077b 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 18-10-2018 CH53_364 a752140dc9f251b06c040db5ae5e077b 330 SUPERFAMILY SSF47413 4 53 1.28E-12 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_364 a752140dc9f251b06c040db5ae5e077b 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 1.4E-18 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_364 a752140dc9f251b06c040db5ae5e077b 330 SUPERFAMILY SSF53822 65 317 4.35E-52 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_364 a752140dc9f251b06c040db5ae5e077b 330 Gene3D G3DSA:3.40.50.2300 67 309 1.7E-58 T 18-10-2018 CH53_364 a752140dc9f251b06c040db5ae5e077b 330 SMART SM00354 5 75 1.1E-18 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_364 a752140dc9f251b06c040db5ae5e077b 330 Gene3D G3DSA:3.40.50.2300 161 292 1.7E-58 T 18-10-2018 CH53_364 a752140dc9f251b06c040db5ae5e077b 330 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 311 8.0E-24 T 18-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH53_364 a752140dc9f251b06c040db5ae5e077b 330 Gene3D G3DSA:1.10.260.40 1 61 8.6E-17 T 18-10-2018 CH53_151 3e94981af44c02fdf4520e226cd8a8b4 582 SUPERFAMILY SSF52540 332 580 5.95E-95 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_151 3e94981af44c02fdf4520e226cd8a8b4 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 3.0E-263 T 18-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 CH53_151 3e94981af44c02fdf4520e226cd8a8b4 582 Gene3D G3DSA:1.20.1560.10 2 328 3.1E-80 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_151 3e94981af44c02fdf4520e226cd8a8b4 582 Gene3D G3DSA:3.40.50.300 329 581 8.8E-96 T 18-10-2018 CH53_151 3e94981af44c02fdf4520e226cd8a8b4 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_151 3e94981af44c02fdf4520e226cd8a8b4 582 SUPERFAMILY SSF90123 14 327 4.97E-74 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_151 3e94981af44c02fdf4520e226cd8a8b4 582 Pfam PF00005 ABC transporter 359 509 4.3E-34 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_151 3e94981af44c02fdf4520e226cd8a8b4 582 SMART SM00382 368 555 1.6E-18 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_151 3e94981af44c02fdf4520e226cd8a8b4 582 Pfam PF00664 ABC transporter transmembrane region 28 297 6.7E-59 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CH53_3353 7eb89fd5a19d9ebf2f1c1eda3a34582d 185 SUPERFAMILY SSF143414 3 94 1.1E-22 T 18-10-2018 IPR037233 CcmK-like superfamily CH53_3353 7eb89fd5a19d9ebf2f1c1eda3a34582d 185 SMART SM00877 95 173 7.0E-28 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_3353 7eb89fd5a19d9ebf2f1c1eda3a34582d 185 SMART SM00877 3 77 1.7E-20 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_3353 7eb89fd5a19d9ebf2f1c1eda3a34582d 185 PIRSF PIRSF034834 1 183 2.2E-73 T 18-10-2018 IPR011238 Polyhedral organelle shell protein PduT CH53_3353 7eb89fd5a19d9ebf2f1c1eda3a34582d 185 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 66 4.0E-21 T 18-10-2018 CH53_3353 7eb89fd5a19d9ebf2f1c1eda3a34582d 185 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 95 158 3.0E-22 T 18-10-2018 CH53_3353 7eb89fd5a19d9ebf2f1c1eda3a34582d 185 Gene3D G3DSA:3.30.70.1710 1 79 2.6E-27 T 18-10-2018 CH53_3353 7eb89fd5a19d9ebf2f1c1eda3a34582d 185 Gene3D G3DSA:3.30.70.1710 80 185 1.7E-36 T 18-10-2018 CH53_3353 7eb89fd5a19d9ebf2f1c1eda3a34582d 185 Pfam PF00936 BMC domain 4 76 3.7E-19 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_3353 7eb89fd5a19d9ebf2f1c1eda3a34582d 185 Pfam PF00936 BMC domain 96 173 6.9E-22 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_3353 7eb89fd5a19d9ebf2f1c1eda3a34582d 185 SUPERFAMILY SSF143414 95 181 1.44E-23 T 18-10-2018 IPR037233 CcmK-like superfamily CH53_1589 6a04ad500dbf75a4a3fb11a284b35747 331 SUPERFAMILY SSF53822 63 317 8.83E-57 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_1589 6a04ad500dbf75a4a3fb11a284b35747 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 2.8E-15 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_1589 6a04ad500dbf75a4a3fb11a284b35747 331 SUPERFAMILY SSF47413 5 63 2.25E-12 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_1589 6a04ad500dbf75a4a3fb11a284b35747 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 18-10-2018 CH53_1589 6a04ad500dbf75a4a3fb11a284b35747 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 309 4.8E-32 T 18-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH53_1589 6a04ad500dbf75a4a3fb11a284b35747 331 Gene3D G3DSA:1.10.260.40 1 61 2.2E-14 T 18-10-2018 CH53_1589 6a04ad500dbf75a4a3fb11a284b35747 331 SMART SM00354 5 75 9.8E-24 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_1589 6a04ad500dbf75a4a3fb11a284b35747 331 Gene3D G3DSA:3.40.50.2300 161 292 6.4E-63 T 18-10-2018 CH53_1589 6a04ad500dbf75a4a3fb11a284b35747 331 Gene3D G3DSA:3.40.50.2300 67 308 6.4E-63 T 18-10-2018 CH53_2534 edbecd507bfffed8ee87632214eefc10 193 Gene3D G3DSA:3.40.50.12740 18 190 1.5E-11 T 18-10-2018 CH53_2534 edbecd507bfffed8ee87632214eefc10 193 SMART SM00421 135 192 0.0045 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2534 edbecd507bfffed8ee87632214eefc10 193 SUPERFAMILY SSF46894 132 184 8.5E-10 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_2534 edbecd507bfffed8ee87632214eefc10 193 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 185 1.4E-8 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_781 0e107dcfac7e78a3deb84f1643f52183 449 Gene3D G3DSA:3.30.300.30 340 446 1.3E-16 T 18-10-2018 CH53_781 0e107dcfac7e78a3deb84f1643f52183 449 Pfam PF13193 AMP-binding enzyme C-terminal domain 355 438 4.1E-6 T 18-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CH53_781 0e107dcfac7e78a3deb84f1643f52183 449 Gene3D G3DSA:3.40.50.12780 5 303 4.4E-20 T 18-10-2018 CH53_781 0e107dcfac7e78a3deb84f1643f52183 449 Pfam PF00501 AMP-binding enzyme 121 281 1.6E-11 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CH53_781 0e107dcfac7e78a3deb84f1643f52183 449 ProSitePatterns PS00455 Putative AMP-binding domain signature. 130 141 - T 18-10-2018 IPR020845 AMP-binding, conserved site CH53_781 0e107dcfac7e78a3deb84f1643f52183 449 SUPERFAMILY SSF56801 11 448 2.35E-48 T 18-10-2018 CH53_3948 fbf050a2c7ce8993d513b7fecf83e4b5 310 Pfam PF02311 AraC-like ligand binding domain 27 162 3.6E-22 T 18-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CH53_3948 fbf050a2c7ce8993d513b7fecf83e4b5 310 Gene3D G3DSA:1.10.10.60 178 288 3.5E-27 T 18-10-2018 CH53_3948 fbf050a2c7ce8993d513b7fecf83e4b5 310 SUPERFAMILY SSF46689 182 232 7.79E-8 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3948 fbf050a2c7ce8993d513b7fecf83e4b5 310 Pfam PF12833 Helix-turn-helix domain 205 284 7.7E-20 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_3948 fbf050a2c7ce8993d513b7fecf83e4b5 310 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 236 278 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CH53_3948 fbf050a2c7ce8993d513b7fecf83e4b5 310 SUPERFAMILY SSF46689 236 286 1.61E-12 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3948 fbf050a2c7ce8993d513b7fecf83e4b5 310 Gene3D G3DSA:2.60.120.280 12 174 1.6E-57 T 18-10-2018 CH53_3948 fbf050a2c7ce8993d513b7fecf83e4b5 310 SMART SM00342 199 282 5.0E-31 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_3948 fbf050a2c7ce8993d513b7fecf83e4b5 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 266 5.7E-6 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_3948 fbf050a2c7ce8993d513b7fecf83e4b5 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 282 5.7E-6 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_3948 fbf050a2c7ce8993d513b7fecf83e4b5 310 SUPERFAMILY SSF51215 12 171 2.22E-29 T 18-10-2018 IPR037923 Transcription regulator HTH-like CH53_3246 3d44a0a366ff7d43cad9c06773de3da2 257 Gene3D G3DSA:1.10.150.290 132 237 6.7E-86 T 18-10-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 CH53_3246 3d44a0a366ff7d43cad9c06773de3da2 257 SUPERFAMILY SSF53335 5 209 4.97E-31 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_3246 3d44a0a366ff7d43cad9c06773de3da2 257 Gene3D G3DSA:3.40.50.150 9 254 6.7E-86 T 18-10-2018 CH53_3246 3d44a0a366ff7d43cad9c06773de3da2 257 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 257 43.365 T 18-10-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 CH53_3246 3d44a0a366ff7d43cad9c06773de3da2 257 Pfam PF13847 Methyltransferase domain 34 148 1.9E-13 T 18-10-2018 IPR025714 Methyltransferase domain CH53_3105 6fcf81b4eb13acefec2be9e387dd4fd8 553 SUPERFAMILY SSF58104 239 520 1.7E-71 T 18-10-2018 CH53_3105 6fcf81b4eb13acefec2be9e387dd4fd8 553 Gene3D G3DSA:1.10.287.950 215 518 2.6E-89 T 18-10-2018 CH53_3105 6fcf81b4eb13acefec2be9e387dd4fd8 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 484 2.8E-55 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_3105 6fcf81b4eb13acefec2be9e387dd4fd8 553 Pfam PF02203 Tar ligand binding domain homologue 3 174 8.6E-11 T 18-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CH53_3105 6fcf81b4eb13acefec2be9e387dd4fd8 553 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 18-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CH53_3105 6fcf81b4eb13acefec2be9e387dd4fd8 553 SMART SM00283 269 516 1.8E-91 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_3105 6fcf81b4eb13acefec2be9e387dd4fd8 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 9.0E-62 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3105 6fcf81b4eb13acefec2be9e387dd4fd8 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 9.0E-62 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3105 6fcf81b4eb13acefec2be9e387dd4fd8 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 9.0E-62 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3105 6fcf81b4eb13acefec2be9e387dd4fd8 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 9.0E-62 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3105 6fcf81b4eb13acefec2be9e387dd4fd8 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 9.0E-62 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_1296 77a06e0a7a68419034adf38b875e3f68 85 Gene3D G3DSA:2.40.50.100 21 85 2.7E-31 T 18-10-2018 CH53_1296 77a06e0a7a68419034adf38b875e3f68 85 SUPERFAMILY SSF110324 2 79 1.33E-35 T 18-10-2018 CH53_1296 77a06e0a7a68419034adf38b875e3f68 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 8.2E-44 T 18-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1296 77a06e0a7a68419034adf38b875e3f68 85 Pfam PF01016 Ribosomal L27 protein 2 82 4.3E-40 T 18-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1296 77a06e0a7a68419034adf38b875e3f68 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 18-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1296 77a06e0a7a68419034adf38b875e3f68 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 9.0E-18 T 18-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1296 77a06e0a7a68419034adf38b875e3f68 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.808 T 18-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1296 77a06e0a7a68419034adf38b875e3f68 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.1E-40 T 18-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1296 77a06e0a7a68419034adf38b875e3f68 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.1E-40 T 18-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1296 77a06e0a7a68419034adf38b875e3f68 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.1E-40 T 18-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2772 295cd2b8797366a5fbdc97ac9c235d9b 418 SUPERFAMILY SSF55031 220 331 1.59E-21 T 18-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CH53_2772 295cd2b8797366a5fbdc97ac9c235d9b 418 Gene3D G3DSA:3.30.70.360 220 334 2.6E-130 T 18-10-2018 CH53_2772 295cd2b8797366a5fbdc97ac9c235d9b 418 PIRSF PIRSF001235 10 418 5.8E-126 T 18-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 CH53_2772 295cd2b8797366a5fbdc97ac9c235d9b 418 SUPERFAMILY SSF53187 19 415 1.11E-78 T 18-10-2018 CH53_2772 295cd2b8797366a5fbdc97ac9c235d9b 418 Gene3D G3DSA:3.40.630.10 31 410 2.6E-130 T 18-10-2018 CH53_2772 295cd2b8797366a5fbdc97ac9c235d9b 418 Pfam PF01546 Peptidase family M20/M25/M40 84 413 1.4E-24 T 18-10-2018 IPR002933 Peptidase M20 GO:0016787 CH53_2772 295cd2b8797366a5fbdc97ac9c235d9b 418 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 31 413 8.1E-112 T 18-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 CH53_950 b999a7dec41143b76a1a8db0f54affa9 545 SUPERFAMILY SSF52540 3 269 7.79E-122 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_950 b999a7dec41143b76a1a8db0f54affa9 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 6.6E-63 T 18-10-2018 IPR017926 Glutamine amidotransferase CH53_950 b999a7dec41143b76a1a8db0f54affa9 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 2.3E-261 T 18-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CH53_950 b999a7dec41143b76a1a8db0f54affa9 545 Gene3D G3DSA:3.40.50.300 1 285 1.1E-134 T 18-10-2018 CH53_950 b999a7dec41143b76a1a8db0f54affa9 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.026 T 18-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CH53_950 b999a7dec41143b76a1a8db0f54affa9 545 Pfam PF06418 CTP synthase N-terminus 5 266 3.4E-125 T 18-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CH53_950 b999a7dec41143b76a1a8db0f54affa9 545 SUPERFAMILY SSF52317 289 541 1.74E-88 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_950 b999a7dec41143b76a1a8db0f54affa9 545 Gene3D G3DSA:3.40.50.880 287 545 1.2E-105 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_1959 6faa63077ff99da84e381add21c0b8b6 255 SUPERFAMILY SSF49584 158 249 2.62E-17 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_1959 6faa63077ff99da84e381add21c0b8b6 255 Gene3D G3DSA:2.60.40.10 42 165 4.1E-37 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_1959 6faa63077ff99da84e381add21c0b8b6 255 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 190 248 4.7E-14 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_1959 6faa63077ff99da84e381add21c0b8b6 255 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 41 164 3.6E-40 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_1959 6faa63077ff99da84e381add21c0b8b6 255 SUPERFAMILY SSF49354 35 164 3.92E-38 T 18-10-2018 IPR008962 PapD-like superfamily CH53_1959 6faa63077ff99da84e381add21c0b8b6 255 PRINTS PR00969 Pili chaperone signature 185 200 2.1E-28 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1959 6faa63077ff99da84e381add21c0b8b6 255 PRINTS PR00969 Pili chaperone signature 41 50 2.1E-28 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1959 6faa63077ff99da84e381add21c0b8b6 255 PRINTS PR00969 Pili chaperone signature 119 136 2.1E-28 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1959 6faa63077ff99da84e381add21c0b8b6 255 PRINTS PR00969 Pili chaperone signature 146 161 2.1E-28 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1959 6faa63077ff99da84e381add21c0b8b6 255 PRINTS PR00969 Pili chaperone signature 90 111 2.1E-28 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1959 6faa63077ff99da84e381add21c0b8b6 255 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 118 135 - T 18-10-2018 IPR018046 Pili assembly chaperone, conserved site CH53_1959 6faa63077ff99da84e381add21c0b8b6 255 Gene3D G3DSA:2.60.40.10 169 255 7.8E-18 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2389 855e3b8285fbe6edf837a8ff439b0cb2 216 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 21 213 1.6E-51 T 18-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CH53_2389 855e3b8285fbe6edf837a8ff439b0cb2 216 Gene3D G3DSA:2.60.120.590 15 215 3.4E-55 T 18-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily CH53_2389 855e3b8285fbe6edf837a8ff439b0cb2 216 SUPERFAMILY SSF51197 18 214 3.98E-57 T 18-10-2018 CH53_3869 a2a6cf7926434a1466683ff39439c51e 135 PIRSF PIRSF002096 1 135 6.3E-57 T 18-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CH53_3869 a2a6cf7926434a1466683ff39439c51e 135 Pfam PF00816 H-NS histone family 32 126 2.3E-20 T 18-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CH53_3869 a2a6cf7926434a1466683ff39439c51e 135 Gene3D G3DSA:1.10.287.1050 1 83 3.6E-36 T 18-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 CH53_3869 a2a6cf7926434a1466683ff39439c51e 135 Gene3D G3DSA:4.10.430.10 91 135 6.4E-25 T 18-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 CH53_3869 a2a6cf7926434a1466683ff39439c51e 135 SUPERFAMILY SSF81273 2 58 9.42E-18 T 18-10-2018 CH53_3869 a2a6cf7926434a1466683ff39439c51e 135 SMART SM00528 87 135 4.8E-25 T 18-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CH53_3869 a2a6cf7926434a1466683ff39439c51e 135 SUPERFAMILY SSF81273 93 135 1.06E-12 T 18-10-2018 CH53_3240 4743a91d3405ff31d07a200650b187b0 320 Gene3D G3DSA:3.40.50.150 45 307 1.4E-78 T 18-10-2018 CH53_3240 4743a91d3405ff31d07a200650b187b0 320 Pfam PF05971 Protein of unknown function (DUF890) 10 307 2.1E-124 T 18-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 CH53_3240 4743a91d3405ff31d07a200650b187b0 320 PIRSF PIRSF029038 1 320 5.0E-154 T 18-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 CH53_3240 4743a91d3405ff31d07a200650b187b0 320 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 11 310 54.41 T 18-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 CH53_3240 4743a91d3405ff31d07a200650b187b0 320 SUPERFAMILY SSF53335 48 306 5.1E-31 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_2695 fb5f46181db14946e1a04d20520d0501 627 Pfam PF13538 UvrD-like helicase C-terminal domain 552 598 1.5E-15 T 18-10-2018 IPR027785 UvrD-like helicase C-terminal domain CH53_2695 fb5f46181db14946e1a04d20520d0501 627 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 14 621 52.516 T 18-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CH53_2695 fb5f46181db14946e1a04d20520d0501 627 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 6 623 6.0E-185 T 18-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CH53_2695 fb5f46181db14946e1a04d20520d0501 627 Gene3D G3DSA:1.10.10.1020 1 114 2.0E-32 T 18-10-2018 CH53_2695 fb5f46181db14946e1a04d20520d0501 627 SUPERFAMILY SSF52540 8 376 2.34E-49 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2695 fb5f46181db14946e1a04d20520d0501 627 Gene3D G3DSA:3.40.50.300 115 371 1.7E-76 T 18-10-2018 CH53_2695 fb5f46181db14946e1a04d20520d0501 627 SUPERFAMILY SSF52540 292 623 2.12E-61 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2695 fb5f46181db14946e1a04d20520d0501 627 Pfam PF13604 AAA domain 167 328 6.5E-32 T 18-10-2018 CH53_2695 fb5f46181db14946e1a04d20520d0501 627 Gene3D G3DSA:3.40.50.300 381 494 2.3E-28 T 18-10-2018 CH53_2695 fb5f46181db14946e1a04d20520d0501 627 Gene3D G3DSA:3.40.50.300 495 612 8.5E-28 T 18-10-2018 CH53_43 6d7f6d492826472914ccf53b7451618e 316 SUPERFAMILY SSF103481 55 159 9.81E-15 T 18-10-2018 CH53_43 6d7f6d492826472914ccf53b7451618e 316 SUPERFAMILY SSF103481 203 306 1.31E-11 T 18-10-2018 CH53_43 6d7f6d492826472914ccf53b7451618e 316 Pfam PF00892 EamA-like transporter family 16 157 2.2E-17 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_43 6d7f6d492826472914ccf53b7451618e 316 Pfam PF00892 EamA-like transporter family 169 303 5.5E-17 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_2936 65d2ac97833e38b54cfbbbc4580c62af 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.399 T 18-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CH53_2936 65d2ac97833e38b54cfbbbc4580c62af 288 Gene3D G3DSA:3.40.50.720 6 259 8.7E-105 T 18-10-2018 CH53_2936 65d2ac97833e38b54cfbbbc4580c62af 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 4.8E-38 T 18-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CH53_2936 65d2ac97833e38b54cfbbbc4580c62af 288 SUPERFAMILY SSF53223 1 122 6.04E-39 T 18-10-2018 CH53_2936 65d2ac97833e38b54cfbbbc4580c62af 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.4E-86 T 18-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CH53_2936 65d2ac97833e38b54cfbbbc4580c62af 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.4E-86 T 18-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CH53_2936 65d2ac97833e38b54cfbbbc4580c62af 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.4E-86 T 18-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CH53_2936 65d2ac97833e38b54cfbbbc4580c62af 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.4E-86 T 18-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CH53_2936 65d2ac97833e38b54cfbbbc4580c62af 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.4E-86 T 18-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CH53_2936 65d2ac97833e38b54cfbbbc4580c62af 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.4E-86 T 18-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CH53_2936 65d2ac97833e38b54cfbbbc4580c62af 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.4E-86 T 18-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CH53_2936 65d2ac97833e38b54cfbbbc4580c62af 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 18-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CH53_2936 65d2ac97833e38b54cfbbbc4580c62af 288 SUPERFAMILY SSF51735 123 286 6.25E-52 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2936 65d2ac97833e38b54cfbbbc4580c62af 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 18-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CH53_2936 65d2ac97833e38b54cfbbbc4580c62af 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 1.9E-67 T 18-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CH53_2936 65d2ac97833e38b54cfbbbc4580c62af 288 Gene3D G3DSA:3.40.50.10860 8 276 8.7E-105 T 18-10-2018 CH53_1136 4e1533e470fe56847fc7170abd086241 508 SUPERFAMILY SSF56935 98 508 4.33E-134 T 18-10-2018 CH53_1136 4e1533e470fe56847fc7170abd086241 508 Gene3D G3DSA:2.40.170.10 98 508 2.8E-169 T 18-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 CH53_1136 4e1533e470fe56847fc7170abd086241 508 Pfam PF02264 LamB porin 101 508 1.3E-106 T 18-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 CH53_1136 4e1533e470fe56847fc7170abd086241 508 Gene3D G3DSA:1.20.5.340 19 97 5.6E-5 T 18-10-2018 CH53_1136 4e1533e470fe56847fc7170abd086241 508 Pfam PF11471 Maltoporin periplasmic N-terminal extension 2 59 2.6E-15 T 18-10-2018 IPR021570 LamB-type porin N-terminal domain CH53_1136 4e1533e470fe56847fc7170abd086241 508 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 105 504 0.0 T 18-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 CH53_1136 4e1533e470fe56847fc7170abd086241 508 SUPERFAMILY SSF57997 33 92 7.68E-6 T 18-10-2018 CH53_2579 3e46dc864be62e18061200e5a1d33022 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 4.9E-43 T 18-10-2018 IPR007416 Protein of unknown function DUF469 CH53_1844 3a157b688cfb90117e4d7132b4c597e6 887 SMART SM00778 32 68 6.0E-18 T 18-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 CH53_1844 3a157b688cfb90117e4d7132b4c597e6 887 SMART SM00493 205 284 0.0066 T 18-10-2018 IPR006171 TOPRIM domain CH53_1844 3a157b688cfb90117e4d7132b4c597e6 887 Pfam PF06048 Domain of unknown function (DUF927) 328 611 7.5E-100 T 18-10-2018 IPR009270 Domain of unknown function DUF927 CH53_1844 3a157b688cfb90117e4d7132b4c597e6 887 SUPERFAMILY SSF57783 12 95 2.38E-9 T 18-10-2018 CH53_1844 3a157b688cfb90117e4d7132b4c597e6 887 Pfam PF08273 Zinc-binding domain of primase-helicase 32 68 1.8E-16 T 18-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 CH53_1844 3a157b688cfb90117e4d7132b4c597e6 887 Gene3D G3DSA:3.40.1360.10 194 313 3.3E-5 T 18-10-2018 CH53_1844 3a157b688cfb90117e4d7132b4c597e6 887 Pfam PF13362 Toprim domain 207 303 1.2E-9 T 18-10-2018 IPR006171 TOPRIM domain CH53_2991 160f331ba9293c632999c152337e9577 308 SUPERFAMILY SSF47454 137 194 1.07E-9 T 18-10-2018 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily GO:0003677|GO:0006355 CH53_2991 160f331ba9293c632999c152337e9577 308 Gene3D G3DSA:1.10.10.60 249 304 4.1E-17 T 18-10-2018 CH53_2991 160f331ba9293c632999c152337e9577 308 Gene3D G3DSA:1.10.10.60 198 248 1.7E-10 T 18-10-2018 CH53_2991 160f331ba9293c632999c152337e9577 308 SUPERFAMILY SSF46689 251 299 1.48E-11 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_2991 160f331ba9293c632999c152337e9577 308 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 298 9.7E-6 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_2991 160f331ba9293c632999c152337e9577 308 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 282 9.7E-6 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_2991 160f331ba9293c632999c152337e9577 308 SMART SM00342 215 298 2.6E-26 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_2991 160f331ba9293c632999c152337e9577 308 Pfam PF12833 Helix-turn-helix domain 222 299 3.5E-19 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_2991 160f331ba9293c632999c152337e9577 308 SUPERFAMILY SSF51182 41 115 2.62E-6 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_1536 5638109b6de2dc609a725b5caea15a72 470 Gene3D G3DSA:3.40.50.720 1 112 3.8E-29 T 18-10-2018 CH53_1536 5638109b6de2dc609a725b5caea15a72 470 SUPERFAMILY SSF51735 1 112 4.73E-24 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1536 5638109b6de2dc609a725b5caea15a72 470 Gene3D G3DSA:3.30.160.110 113 148 4.1E-20 T 18-10-2018 CH53_1536 5638109b6de2dc609a725b5caea15a72 470 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 18-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_1536 5638109b6de2dc609a725b5caea15a72 470 SUPERFAMILY SSF75615 114 206 5.36E-27 T 18-10-2018 CH53_1536 5638109b6de2dc609a725b5caea15a72 470 SUPERFAMILY SSF53790 215 458 2.22E-80 T 18-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CH53_1536 5638109b6de2dc609a725b5caea15a72 470 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 206 7.5E-70 T 18-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_1536 5638109b6de2dc609a725b5caea15a72 470 Pfam PF13241 Putative NAD(P)-binding 6 115 2.8E-23 T 18-10-2018 CH53_1536 5638109b6de2dc609a725b5caea15a72 470 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 18-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_1536 5638109b6de2dc609a725b5caea15a72 470 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 426 8.1E-50 T 18-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CH53_1536 5638109b6de2dc609a725b5caea15a72 470 Gene3D G3DSA:1.10.8.210 149 213 6.5E-27 T 18-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_1536 5638109b6de2dc609a725b5caea15a72 470 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 2.7E-18 T 18-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_1536 5638109b6de2dc609a725b5caea15a72 470 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 6.5E-93 T 18-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_1536 5638109b6de2dc609a725b5caea15a72 470 Gene3D G3DSA:3.40.1010.10 215 331 7.4E-45 T 18-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CH53_1536 5638109b6de2dc609a725b5caea15a72 470 PIRSF PIRSF036426 1 465 1.0E-203 T 18-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_1536 5638109b6de2dc609a725b5caea15a72 470 Gene3D G3DSA:3.30.950.10 332 469 1.9E-46 T 18-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CH53_1536 5638109b6de2dc609a725b5caea15a72 470 Pfam PF14824 Sirohaem biosynthesis protein central 121 146 7.8E-9 T 18-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_1536 5638109b6de2dc609a725b5caea15a72 470 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 51.354 T 18-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_927 afc4da1065c391d2703fe899d8d54de6 250 SUPERFAMILY SSF64167 2 247 3.92E-81 T 18-10-2018 CH53_927 afc4da1065c391d2703fe899d8d54de6 250 Pfam PF01975 Survival protein SurE 4 182 2.0E-57 T 18-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CH53_927 afc4da1065c391d2703fe899d8d54de6 250 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 250 39.395 T 18-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CH53_927 afc4da1065c391d2703fe899d8d54de6 250 Gene3D G3DSA:3.40.1210.10 1 250 2.2E-103 T 18-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CH53_927 afc4da1065c391d2703fe899d8d54de6 250 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 233 2.1E-75 T 18-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CH53_2312 adf1e145fe30cfbc9c7d30b448cda8a3 120 SUPERFAMILY SSF54593 5 120 1.4E-18 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_2312 adf1e145fe30cfbc9c7d30b448cda8a3 120 Gene3D G3DSA:3.30.720.110 66 119 3.7E-27 T 18-10-2018 CH53_2312 adf1e145fe30cfbc9c7d30b448cda8a3 120 Gene3D G3DSA:3.30.720.120 1 54 7.9E-26 T 18-10-2018 CH53_2312 adf1e145fe30cfbc9c7d30b448cda8a3 120 PIRSF PIRSF039020 1 120 1.9E-49 T 18-10-2018 IPR026275 Glyoxalase/dioxygenase/EhpR CH53_2312 adf1e145fe30cfbc9c7d30b448cda8a3 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 115 3.5E-4 T 18-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CH53_2926 6a3c2b198f7b6aac54a4a44939364873 258 SUPERFAMILY SSF51735 3 254 5.61E-57 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2926 6a3c2b198f7b6aac54a4a44939364873 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 4.2E-5 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2926 6a3c2b198f7b6aac54a4a44939364873 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.2E-5 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2926 6a3c2b198f7b6aac54a4a44939364873 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 4.2E-5 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2926 6a3c2b198f7b6aac54a4a44939364873 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 0.0046 T 18-10-2018 CH53_2926 6a3c2b198f7b6aac54a4a44939364873 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CH53_2926 6a3c2b198f7b6aac54a4a44939364873 258 Gene3D G3DSA:3.40.50.720 2 244 7.1E-61 T 18-10-2018 CH53_2926 6a3c2b198f7b6aac54a4a44939364873 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.4E-18 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2926 6a3c2b198f7b6aac54a4a44939364873 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.4E-18 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2926 6a3c2b198f7b6aac54a4a44939364873 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.4E-18 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2926 6a3c2b198f7b6aac54a4a44939364873 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.4E-18 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2926 6a3c2b198f7b6aac54a4a44939364873 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.4E-18 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2926 6a3c2b198f7b6aac54a4a44939364873 258 Pfam PF00106 short chain dehydrogenase 3 191 7.4E-43 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3789 93bee1e1d7c1b7b743e71650d8014b62 186 SUPERFAMILY SSF54593 5 183 3.71E-65 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_3789 93bee1e1d7c1b7b743e71650d8014b62 186 Pfam PF06185 YecM protein 10 183 1.6E-66 T 18-10-2018 IPR010393 Protein of unknown function DUF991 CH53_3789 93bee1e1d7c1b7b743e71650d8014b62 186 Gene3D G3DSA:3.10.180.10 1 186 1.9E-66 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_1073 3e4d4a45eb2b8cfecfba22d75630d56c 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.2E-33 T 18-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1073 3e4d4a45eb2b8cfecfba22d75630d56c 87 Gene3D G3DSA:1.20.58.110 1 87 3.8E-31 T 18-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1073 3e4d4a45eb2b8cfecfba22d75630d56c 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.359 T 18-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1073 3e4d4a45eb2b8cfecfba22d75630d56c 87 SUPERFAMILY SSF46992 3 86 1.44E-31 T 18-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1073 3e4d4a45eb2b8cfecfba22d75630d56c 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 87 1.0E-28 T 18-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1073 3e4d4a45eb2b8cfecfba22d75630d56c 87 Pfam PF01649 Ribosomal protein S20 2 84 1.0E-27 T 18-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_876 cda674a88c1b2498d608adddf15e4838 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 6 445 4.4E-164 T 18-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CH53_876 cda674a88c1b2498d608adddf15e4838 445 PIRSF PIRSF002746 2 445 1.1E-143 T 18-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CH53_876 cda674a88c1b2498d608adddf15e4838 445 Pfam PF02447 GntP family permease 10 443 1.3E-157 T 18-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CH53_2048 c6f3db3f62f10d0d547afec5fdc421d3 246 Gene3D G3DSA:3.20.20.190 9 237 1.5E-80 T 18-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CH53_2048 c6f3db3f62f10d0d547afec5fdc421d3 246 SUPERFAMILY SSF51695 6 242 2.17E-63 T 18-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CH53_2048 c6f3db3f62f10d0d547afec5fdc421d3 246 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 13 240 6.4E-42 T 18-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CH53_1869 43b7597815d539b17976a83169be72c6 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 4.6E-32 T 18-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CH53_1869 43b7597815d539b17976a83169be72c6 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.465 T 18-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 CH53_1869 43b7597815d539b17976a83169be72c6 341 SUPERFAMILY SSF50129 1 173 3.2E-54 T 18-10-2018 IPR011032 GroES-like superfamily CH53_1869 43b7597815d539b17976a83169be72c6 341 Gene3D G3DSA:3.90.180.10 21 328 6.7E-120 T 18-10-2018 CH53_1869 43b7597815d539b17976a83169be72c6 341 SUPERFAMILY SSF51735 141 305 3.54E-38 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1869 43b7597815d539b17976a83169be72c6 341 Gene3D G3DSA:3.40.50.720 153 286 6.7E-120 T 18-10-2018 CH53_1869 43b7597815d539b17976a83169be72c6 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 18-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CH53_1869 43b7597815d539b17976a83169be72c6 341 SMART SM00829 12 338 1.7E-6 T 18-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CH53_1869 43b7597815d539b17976a83169be72c6 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 6.9E-183 T 18-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 CH53_1869 43b7597815d539b17976a83169be72c6 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 5.8E-28 T 18-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CH53_1575 cfce79652b1bb5c4e640d91742492a12 504 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 18-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_1575 cfce79652b1bb5c4e640d91742492a12 504 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 483 2.4E-12 T 18-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_1575 cfce79652b1bb5c4e640d91742492a12 504 SUPERFAMILY SSF54373 226 319 2.35E-7 T 18-10-2018 CH53_1575 cfce79652b1bb5c4e640d91742492a12 504 Gene3D G3DSA:3.30.9.10 82 320 1.1E-146 T 18-10-2018 CH53_1575 cfce79652b1bb5c4e640d91742492a12 504 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 18-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_1575 cfce79652b1bb5c4e640d91742492a12 504 Gene3D G3DSA:3.50.50.60 5 366 1.1E-146 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1575 cfce79652b1bb5c4e640d91742492a12 504 Gene3D G3DSA:1.10.8.870 391 460 3.6E-27 T 18-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_1575 cfce79652b1bb5c4e640d91742492a12 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 4.8E-28 T 18-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_1575 cfce79652b1bb5c4e640d91742492a12 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 4.8E-28 T 18-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_1575 cfce79652b1bb5c4e640d91742492a12 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 4.8E-28 T 18-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_1575 cfce79652b1bb5c4e640d91742492a12 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 4.8E-28 T 18-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_1575 cfce79652b1bb5c4e640d91742492a12 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.8E-28 T 18-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_1575 cfce79652b1bb5c4e640d91742492a12 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 4.8E-28 T 18-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CH53_1575 cfce79652b1bb5c4e640d91742492a12 504 SUPERFAMILY SSF51905 1 375 6.48E-36 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1575 cfce79652b1bb5c4e640d91742492a12 504 Pfam PF01266 FAD dependent oxidoreductase 5 323 1.1E-50 T 18-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CH53_2293 87d7af1690abaa7aeca16f803009cc12 129 Hamap MF_00904 Modulator protein MzrA [mzrA]. 10 119 26.977 T 18-10-2018 IPR026574 Modulator protein MzrA CH53_2293 87d7af1690abaa7aeca16f803009cc12 129 Gene3D G3DSA:3.30.70.260 34 113 1.3E-34 T 18-10-2018 CH53_2293 87d7af1690abaa7aeca16f803009cc12 129 Pfam PF13721 SecD export protein N-terminal TM region 10 107 4.0E-21 T 18-10-2018 IPR027398 SecD export protein N-terminal TM domain CH53_200 211c36cf5fc5cce85f48dde7c9cc2449 376 Gene3D G3DSA:3.40.50.150 14 368 8.8E-74 T 18-10-2018 CH53_200 211c36cf5fc5cce85f48dde7c9cc2449 376 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 373 5.8E-18 T 18-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CH53_200 211c36cf5fc5cce85f48dde7c9cc2449 376 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 81.051 T 18-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 CH53_200 211c36cf5fc5cce85f48dde7c9cc2449 376 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 373 3.8E-215 T 18-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 CH53_200 211c36cf5fc5cce85f48dde7c9cc2449 376 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 18-10-2018 IPR030390 RNA methyltransferase TrmA, active site CH53_200 211c36cf5fc5cce85f48dde7c9cc2449 376 SUPERFAMILY SSF53335 3 372 3.93E-54 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_200 211c36cf5fc5cce85f48dde7c9cc2449 376 Gene3D G3DSA:3.40.1350.30 56 211 8.8E-74 T 18-10-2018 CH53_200 211c36cf5fc5cce85f48dde7c9cc2449 376 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 18-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site CH53_200 211c36cf5fc5cce85f48dde7c9cc2449 376 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 3 367 3.7E-56 T 18-10-2018 CH53_2408 aae9162276feaa7ef8c04e420e99cb40 564 Gene3D G3DSA:1.10.645.10 1 549 1.3E-217 T 18-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_2408 aae9162276feaa7ef8c04e420e99cb40 564 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 540 549 - T 18-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CH53_2408 aae9162276feaa7ef8c04e420e99cb40 564 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 18-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CH53_2408 aae9162276feaa7ef8c04e420e99cb40 564 SUPERFAMILY SSF56762 1 549 4.06E-168 T 18-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_2408 aae9162276feaa7ef8c04e420e99cb40 564 Pfam PF00374 Nickel-dependent hydrogenase 39 549 2.9E-204 T 18-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CH53_3183 e15e996a0d13e91be992c4bd1debbb1d 425 Gene3D G3DSA:3.40.640.10 61 330 1.5E-178 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_3183 e15e996a0d13e91be992c4bd1debbb1d 425 Pfam PF00202 Aminotransferase class-III 27 421 9.4E-132 T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CH53_3183 e15e996a0d13e91be992c4bd1debbb1d 425 Gene3D G3DSA:3.90.1150.10 10 415 1.5E-178 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_3183 e15e996a0d13e91be992c4bd1debbb1d 425 PIRSF PIRSF000521 30 424 1.9E-30 T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CH53_3183 e15e996a0d13e91be992c4bd1debbb1d 425 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 51.927 T 18-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CH53_3183 e15e996a0d13e91be992c4bd1debbb1d 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CH53_3183 e15e996a0d13e91be992c4bd1debbb1d 425 SUPERFAMILY SSF53383 1 421 3.94E-139 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_3183 e15e996a0d13e91be992c4bd1debbb1d 425 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 1.0E-187 T 18-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CH53_1137 8ae548a359a212d6e423e39c4a696487 456 Pfam PF02378 Phosphotransferase system, EIIC 110 395 3.4E-49 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_1137 8ae548a359a212d6e423e39c4a696487 456 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_1137 8ae548a359a212d6e423e39c4a696487 456 SUPERFAMILY SSF55604 6 81 4.05E-20 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_1137 8ae548a359a212d6e423e39c4a696487 456 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 4 448 1.7E-191 T 18-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 CH53_1137 8ae548a359a212d6e423e39c4a696487 456 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 153 437 7.5E-91 T 18-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CH53_1137 8ae548a359a212d6e423e39c4a696487 456 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 111 8.0E-21 T 18-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CH53_1137 8ae548a359a212d6e423e39c4a696487 456 Pfam PF00367 phosphotransferase system, EIIB 10 40 9.5E-14 T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_1137 8ae548a359a212d6e423e39c4a696487 456 Gene3D G3DSA:3.30.1360.60 1 77 1.6E-24 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_1693 2feaa2797322b3d7f8c3d3dfec93ad22 640 SUPERFAMILY SSF55804 499 637 5.49E-41 T 18-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CH53_1693 2feaa2797322b3d7f8c3d3dfec93ad22 640 Gene3D G3DSA:3.40.930.10 493 640 1.6E-53 T 18-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CH53_1693 2feaa2797322b3d7f8c3d3dfec93ad22 640 SUPERFAMILY SSF52794 380 470 5.02E-23 T 18-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CH53_1693 2feaa2797322b3d7f8c3d3dfec93ad22 640 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 542 558 - T 18-10-2018 IPR002178 PTS EIIA type-2 domain CH53_1693 2feaa2797322b3d7f8c3d3dfec93ad22 640 Gene3D G3DSA:3.40.50.2300 368 473 1.1E-36 T 18-10-2018 CH53_1693 2feaa2797322b3d7f8c3d3dfec93ad22 640 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 3.9E-183 T 18-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 CH53_1693 2feaa2797322b3d7f8c3d3dfec93ad22 640 Pfam PF02378 Phosphotransferase system, EIIC 18 278 3.6E-19 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_1693 2feaa2797322b3d7f8c3d3dfec93ad22 640 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 503 636 2.3E-33 T 18-10-2018 IPR002178 PTS EIIA type-2 domain CH53_1693 2feaa2797322b3d7f8c3d3dfec93ad22 640 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 382 457 5.6E-10 T 18-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CH53_1366 78fbba69f16e84be63dbe7223675de1f 170 Pfam PF04186 FxsA cytoplasmic membrane protein 8 109 9.9E-33 T 18-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 CH53_4306 1945d9ba7be08f4369298ad80372dd86 89 SUPERFAMILY SSF46955 4 66 5.68E-22 T 18-10-2018 IPR009061 Putative DNA-binding domain superfamily CH53_4306 1945d9ba7be08f4369298ad80372dd86 89 Pfam PF07825 Excisionase-like protein 5 58 2.4E-14 T 18-10-2018 IPR012884 Excisionase-like GO:0003677|GO:0006310 CH53_4306 1945d9ba7be08f4369298ad80372dd86 89 Gene3D G3DSA:1.10.1660.20 3 88 8.8E-24 T 18-10-2018 IPR038137 Excisionase-like superfamily CH53_4079 d3fd34b13dbf6fce283a8153a775a494 424 Gene3D G3DSA:3.40.50.620 1 227 2.7E-94 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_4079 d3fd34b13dbf6fce283a8153a775a494 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 5.7E-91 T 18-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_4079 d3fd34b13dbf6fce283a8153a775a494 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 45.967 T 18-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 CH53_4079 d3fd34b13dbf6fce283a8153a775a494 424 Gene3D G3DSA:3.10.290.10 331 424 1.1E-28 T 18-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CH53_4079 d3fd34b13dbf6fce283a8153a775a494 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 423 2.6E-142 T 18-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CH53_4079 d3fd34b13dbf6fce283a8153a775a494 424 SUPERFAMILY SSF55174 327 423 8.51E-21 T 18-10-2018 CH53_4079 d3fd34b13dbf6fce283a8153a775a494 424 Pfam PF01479 S4 domain 359 402 9.7E-6 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_4079 d3fd34b13dbf6fce283a8153a775a494 424 Gene3D G3DSA:1.10.240.10 228 330 1.5E-36 T 18-10-2018 CH53_4079 d3fd34b13dbf6fce283a8153a775a494 424 SMART SM00363 357 419 0.0016 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_4079 d3fd34b13dbf6fce283a8153a775a494 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 2.5E-32 T 18-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CH53_4079 d3fd34b13dbf6fce283a8153a775a494 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 2.5E-32 T 18-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CH53_4079 d3fd34b13dbf6fce283a8153a775a494 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 2.5E-32 T 18-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CH53_4079 d3fd34b13dbf6fce283a8153a775a494 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 2.5E-32 T 18-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CH53_4079 d3fd34b13dbf6fce283a8153a775a494 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_4079 d3fd34b13dbf6fce283a8153a775a494 424 SUPERFAMILY SSF52374 4 328 1.1E-108 T 18-10-2018 CH53_984 a1361545b991078c15314b63d9b55d3c 533 SUPERFAMILY SSF49503 172 290 3.33E-31 T 18-10-2018 IPR008972 Cupredoxin CH53_984 a1361545b991078c15314b63d9b55d3c 533 Pfam PF00394 Multicopper oxidase 222 290 2.6E-6 T 18-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 CH53_984 a1361545b991078c15314b63d9b55d3c 533 SUPERFAMILY SSF49503 414 531 6.03E-27 T 18-10-2018 IPR008972 Cupredoxin CH53_984 a1361545b991078c15314b63d9b55d3c 533 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 22 3.0E-5 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CH53_984 a1361545b991078c15314b63d9b55d3c 533 ProSitePatterns PS00080 Multicopper oxidases signature 2. 514 525 - T 18-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 CH53_984 a1361545b991078c15314b63d9b55d3c 533 Pfam PF07732 Multicopper oxidase 52 166 1.9E-32 T 18-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 CH53_984 a1361545b991078c15314b63d9b55d3c 533 Pfam PF07731 Multicopper oxidase 417 532 3.5E-24 T 18-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CH53_984 a1361545b991078c15314b63d9b55d3c 533 SUPERFAMILY SSF49503 34 168 5.63E-32 T 18-10-2018 IPR008972 Cupredoxin CH53_984 a1361545b991078c15314b63d9b55d3c 533 Gene3D G3DSA:2.60.40.420 346 532 2.5E-49 T 18-10-2018 IPR008972 Cupredoxin CH53_984 a1361545b991078c15314b63d9b55d3c 533 Gene3D G3DSA:2.60.40.420 176 326 2.8E-43 T 18-10-2018 IPR008972 Cupredoxin CH53_984 a1361545b991078c15314b63d9b55d3c 533 Gene3D G3DSA:2.60.40.420 30 175 1.2E-45 T 18-10-2018 IPR008972 Cupredoxin CH53_1026 f43cb2e9bb411ba8379f127671fafb8c 320 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 14 318 38.477 T 18-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CH53_1026 f43cb2e9bb411ba8379f127671fafb8c 320 SUPERFAMILY SSF53335 14 318 2.3E-45 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_1026 f43cb2e9bb411ba8379f127671fafb8c 320 PIRSF PIRSF004486 8 319 3.0E-101 T 18-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CH53_1026 f43cb2e9bb411ba8379f127671fafb8c 320 Pfam PF01795 MraW methylase family 12 317 2.8E-115 T 18-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CH53_1026 f43cb2e9bb411ba8379f127671fafb8c 320 SUPERFAMILY SSF81799 121 220 2.49E-34 T 18-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 CH53_1026 f43cb2e9bb411ba8379f127671fafb8c 320 Gene3D G3DSA:3.40.50.150 17 317 3.3E-106 T 18-10-2018 CH53_1026 f43cb2e9bb411ba8379f127671fafb8c 320 Gene3D G3DSA:1.10.150.170 119 221 3.3E-106 T 18-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 CH53_1026 f43cb2e9bb411ba8379f127671fafb8c 320 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 10 317 1.7E-125 T 18-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CH53_535 ad82a662f57d3db84a8e9987a547f69d 338 Gene3D G3DSA:2.160.20.10 24 336 3.7E-26 T 18-10-2018 IPR012334 Pectin lyase fold CH53_535 ad82a662f57d3db84a8e9987a547f69d 338 SUPERFAMILY SSF51126 32 328 7.47E-22 T 18-10-2018 IPR011050 Pectin lyase fold/virulence factor CH53_535 ad82a662f57d3db84a8e9987a547f69d 338 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 168 205 3.9E-6 T 18-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CH53_535 ad82a662f57d3db84a8e9987a547f69d 338 SMART SM00710 262 283 9.2 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_535 ad82a662f57d3db84a8e9987a547f69d 338 SMART SM00710 143 165 870.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_535 ad82a662f57d3db84a8e9987a547f69d 338 SMART SM00710 167 189 710.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_535 ad82a662f57d3db84a8e9987a547f69d 338 SMART SM00710 222 244 1.8 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_535 ad82a662f57d3db84a8e9987a547f69d 338 SMART SM00710 191 221 14.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_535 ad82a662f57d3db84a8e9987a547f69d 338 SMART SM00710 102 124 0.63 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_535 ad82a662f57d3db84a8e9987a547f69d 338 SMART SM00710 310 338 1700.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_535 ad82a662f57d3db84a8e9987a547f69d 338 Pfam PF13229 Right handed beta helix region 92 247 1.1E-12 T 18-10-2018 IPR039448 Right handed beta helix domain CH53_1637 a16b2d60963fe75e70856b343312791c 63 Pfam PF10945 Cellulose biosynthesis protein BcsR 16 57 8.3E-23 T 18-10-2018 IPR024487 Protein YhjR CH53_1637 a16b2d60963fe75e70856b343312791c 63 ProDom PD053230 YHJR ECS4415 STY4179 CYTOPLASMIC 17 58 2.0E-8 T 18-10-2018 IPR024487 Protein YhjR CH53_1860 6df51d584afa211dabbfd8dfc19b57ef 269 Gene3D G3DSA:3.20.190.10 2 128 3.1E-43 T 18-10-2018 IPR035937 MutM-like, N-terminal CH53_1860 6df51d584afa211dabbfd8dfc19b57ef 269 SUPERFAMILY SSF57716 217 268 3.14E-17 T 18-10-2018 CH53_1860 6df51d584afa211dabbfd8dfc19b57ef 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 3.2E-10 T 18-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CH53_1860 6df51d584afa211dabbfd8dfc19b57ef 269 SUPERFAMILY SSF46946 130 222 2.88E-29 T 18-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CH53_1860 6df51d584afa211dabbfd8dfc19b57ef 269 SMART SM01232 129 221 1.3E-46 T 18-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CH53_1860 6df51d584afa211dabbfd8dfc19b57ef 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.1E-30 T 18-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CH53_1860 6df51d584afa211dabbfd8dfc19b57ef 269 Gene3D G3DSA:1.10.8.50 139 269 1.9E-46 T 18-10-2018 CH53_1860 6df51d584afa211dabbfd8dfc19b57ef 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 18-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 CH53_1860 6df51d584afa211dabbfd8dfc19b57ef 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 3.6E-25 T 18-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CH53_1860 6df51d584afa211dabbfd8dfc19b57ef 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 2.1E-100 T 18-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CH53_1860 6df51d584afa211dabbfd8dfc19b57ef 269 SUPERFAMILY SSF81624 2 138 1.18E-43 T 18-10-2018 IPR035937 MutM-like, N-terminal CH53_1860 6df51d584afa211dabbfd8dfc19b57ef 269 SMART SM00898 2 115 1.7E-54 T 18-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CH53_1860 6df51d584afa211dabbfd8dfc19b57ef 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.338 T 18-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CH53_1875 187b7a65566569a4b0e52f36675422af 156 Gene3D G3DSA:3.10.420.10 1 154 6.7E-63 T 18-10-2018 IPR035958 SecB-like superfamily CH53_1875 187b7a65566569a4b0e52f36675422af 156 Pfam PF02556 Preprotein translocase subunit SecB 5 144 1.2E-57 T 18-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CH53_1875 187b7a65566569a4b0e52f36675422af 156 SUPERFAMILY SSF54611 2 141 1.0E-53 T 18-10-2018 IPR035958 SecB-like superfamily CH53_1875 187b7a65566569a4b0e52f36675422af 156 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 144 2.9E-69 T 18-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CH53_1875 187b7a65566569a4b0e52f36675422af 156 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.682 T 18-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CH53_1875 187b7a65566569a4b0e52f36675422af 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 8.4E-42 T 18-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CH53_1875 187b7a65566569a4b0e52f36675422af 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 8.4E-42 T 18-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CH53_1875 187b7a65566569a4b0e52f36675422af 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 8.4E-42 T 18-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CH53_1875 187b7a65566569a4b0e52f36675422af 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 8.4E-42 T 18-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CH53_1486 238b2593ace987d953e258571b3044ef 100 Pfam PF00276 Ribosomal protein L23 9 95 3.2E-32 T 18-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CH53_1486 238b2593ace987d953e258571b3044ef 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 18-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1486 238b2593ace987d953e258571b3044ef 100 SUPERFAMILY SSF54189 3 92 5.04E-31 T 18-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1486 238b2593ace987d953e258571b3044ef 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 23.063 T 18-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CH53_1486 238b2593ace987d953e258571b3044ef 100 Gene3D G3DSA:3.30.70.330 1 100 1.7E-39 T 18-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CH53_2683 3fe26b85376e0b640a6765adf8676d05 228 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 228 153.72 T 18-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 CH53_2683 3fe26b85376e0b640a6765adf8676d05 228 Gene3D G3DSA:3.40.600.10 6 228 4.7E-52 T 18-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 CH53_2683 3fe26b85376e0b640a6765adf8676d05 228 SUPERFAMILY SSF52980 10 227 4.66E-81 T 18-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CH53_2683 3fe26b85376e0b640a6765adf8676d05 228 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 11 226 7.0E-107 T 18-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 CH53_2683 3fe26b85376e0b640a6765adf8676d05 228 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 4.0E-34 T 18-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 CH53_2683 3fe26b85376e0b640a6765adf8676d05 228 SMART SM00927 59 157 2.1E-66 T 18-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 CH53_3449 9f845c19ef6f78a67038ee7180c59e5e 505 PIRSF PIRSF009451 1 505 5.1E-258 T 18-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CH53_3449 9f845c19ef6f78a67038ee7180c59e5e 505 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 39 503 1.6E-255 T 18-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CH53_3449 9f845c19ef6f78a67038ee7180c59e5e 505 Gene3D G3DSA:3.40.1080.10 236 505 3.2E-122 T 18-10-2018 CH53_3449 9f845c19ef6f78a67038ee7180c59e5e 505 SUPERFAMILY SSF100950 27 233 1.61E-71 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_3449 9f845c19ef6f78a67038ee7180c59e5e 505 SUPERFAMILY SSF100950 237 503 2.65E-62 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_3449 9f845c19ef6f78a67038ee7180c59e5e 505 Gene3D G3DSA:3.40.1080.10 3 234 4.5E-94 T 18-10-2018 CH53_3449 9f845c19ef6f78a67038ee7180c59e5e 505 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 24 505 8.1E-239 T 18-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CH53_4176 266defe0e98ca26dd0e19bbc0a9f5a9e 462 Pfam PF13264 Domain of unknown function (DUF4055) 249 385 2.1E-44 T 18-10-2018 IPR025129 Domain of unknown function DUF4055 CH53_2431 51840d6820c06d9831ee10fcff8d2bab 335 Gene3D G3DSA:1.10.3470.10 19 334 8.1E-43 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_2431 51840d6820c06d9831ee10fcff8d2bab 335 Pfam PF01032 FecCD transport family 51 331 9.5E-43 T 18-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CH53_2431 51840d6820c06d9831ee10fcff8d2bab 335 SUPERFAMILY SSF81345 26 331 2.22E-44 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_3376 aa7b6bede71a348ddad1efbaff732fd7 200 SUPERFAMILY SSF53790 1 197 2.62E-39 T 18-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CH53_3376 aa7b6bede71a348ddad1efbaff732fd7 200 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 180 7.7E-26 T 18-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CH53_3376 aa7b6bede71a348ddad1efbaff732fd7 200 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 4 195 5.6E-56 T 18-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 CH53_3376 aa7b6bede71a348ddad1efbaff732fd7 200 Gene3D G3DSA:3.40.1010.10 1 101 5.8E-23 T 18-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CH53_3653 353ee5bb0b34e79595ccab46f65d65f8 136 Pfam PF04266 ASCH domain 26 134 4.9E-23 T 18-10-2018 IPR007374 ASCH domain CH53_3653 353ee5bb0b34e79595ccab46f65d65f8 136 SUPERFAMILY SSF88697 4 134 2.36E-44 T 18-10-2018 IPR015947 PUA-like superfamily CH53_3653 353ee5bb0b34e79595ccab46f65d65f8 136 SMART SM01022 17 134 9.9E-42 T 18-10-2018 IPR007374 ASCH domain CH53_3653 353ee5bb0b34e79595ccab46f65d65f8 136 Gene3D G3DSA:3.10.400.10 2 136 1.9E-47 T 18-10-2018 CH53_3653 353ee5bb0b34e79595ccab46f65d65f8 136 PIRSF PIRSF021320 1 136 1.9E-43 T 18-10-2018 IPR009326 Protein of unknown function DUF984 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 Gene3D G3DSA:3.40.50.1000 287 557 1.0E-70 T 18-10-2018 IPR023214 HAD superfamily CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 SUPERFAMILY SSF81653 117 214 1.22E-20 T 18-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 Pfam PF01814 Hemerythrin HHE cation binding domain 626 758 1.1E-12 T 18-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 Gene3D G3DSA:2.70.150.20 109 219 1.8E-24 T 18-10-2018 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 SUPERFAMILY SSF81665 75 300 2.09E-11 T 18-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 Pfam PF00122 E1-E2 ATPase 116 286 4.6E-38 T 18-10-2018 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 Gene3D G3DSA:3.40.1110.10 317 437 1.0E-70 T 18-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 Pfam PF00702 haloacid dehalogenase-like hydrolase 304 519 7.9E-31 T 18-10-2018 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 SUPERFAMILY SSF56784 304 606 1.3E-42 T 18-10-2018 IPR036412 HAD-like superfamily CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 Gene3D G3DSA:1.20.120.520 616 762 1.1E-8 T 18-10-2018 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 453 463 2.8E-23 T 18-10-2018 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 505 524 2.8E-23 T 18-10-2018 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 541 2.8E-23 T 18-10-2018 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 164 178 2.8E-23 T 18-10-2018 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 306 320 2.8E-23 T 18-10-2018 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 430 441 2.8E-23 T 18-10-2018 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 SUPERFAMILY SSF81660 308 434 1.34E-19 T 18-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 308 314 - T 18-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 86 584 1.1E-61 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_2984 dc388456c967a7dad86b1c38d407b1e9 762 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 64 607 2.2E-155 T 18-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CH53_716 506a961d75710327563601c8e9ca83d1 105 Gene3D G3DSA:3.40.50.2300 1 105 4.3E-33 T 18-10-2018 CH53_716 506a961d75710327563601c8e9ca83d1 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 2.4E-17 T 18-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CH53_716 506a961d75710327563601c8e9ca83d1 105 SUPERFAMILY SSF52794 4 103 2.38E-32 T 18-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CH53_1288 33ce2e2c2503b0c2e3f52eefa0e0fe5e 209 Gene3D G3DSA:3.40.50.150 30 208 1.8E-60 T 18-10-2018 CH53_1288 33ce2e2c2503b0c2e3f52eefa0e0fe5e 209 PIRSF PIRSF005461 1 209 8.2E-81 T 18-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 CH53_1288 33ce2e2c2503b0c2e3f52eefa0e0fe5e 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 9.0E-57 T 18-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CH53_1288 33ce2e2c2503b0c2e3f52eefa0e0fe5e 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 27.505 T 18-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 CH53_1288 33ce2e2c2503b0c2e3f52eefa0e0fe5e 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 4.1E-94 T 18-10-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 CH53_1288 33ce2e2c2503b0c2e3f52eefa0e0fe5e 209 SUPERFAMILY SSF53335 31 207 2.29E-42 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 18-10-2018 IPR031157 Tr-type G domain, conserved site CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 SMART SM00889 485 604 5.1E-67 T 18-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 Gene3D G3DSA:2.40.30.10 299 421 3.5E-50 T 18-10-2018 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 SUPERFAMILY SSF54980 609 696 3.02E-28 T 18-10-2018 IPR035647 EF-G domain III/V-like CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 183 1.4E-29 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 107.915 T 18-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 Pfam PF03764 Elongation factor G, domain IV 484 604 1.3E-45 T 18-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 SUPERFAMILY SSF54211 484 605 8.85E-43 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 Pfam PF03144 Elongation factor Tu domain 2 329 396 1.1E-16 T 18-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 Gene3D G3DSA:3.30.70.870 438 488 1.0E-25 T 18-10-2018 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 SUPERFAMILY SSF52540 6 288 2.76E-102 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 6.8E-64 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 Gene3D G3DSA:3.30.70.240 610 681 3.9E-87 T 18-10-2018 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 Pfam PF14492 Elongation Factor G, domain II 409 483 1.2E-34 T 18-10-2018 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 SUPERFAMILY SSF54980 407 485 6.47E-25 T 18-10-2018 IPR035647 EF-G domain III/V-like CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 698 0.0 T 18-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.2E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.2E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.2E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.2E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.2E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 Gene3D G3DSA:3.40.50.300 1 298 3.3E-106 T 18-10-2018 CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 Pfam PF00679 Elongation factor G C-terminus 606 693 4.3E-31 T 18-10-2018 IPR000640 Elongation factor EFG, domain V-like CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 Gene3D G3DSA:3.30.230.10 489 694 3.9E-87 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 SUPERFAMILY SSF50447 256 405 2.21E-36 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CH53_873 dc426440c96eef3d0967d0fe33a8ecae 702 SMART SM00838 606 694 1.0E-53 T 18-10-2018 IPR000640 Elongation factor EFG, domain V-like CH53_1863 d2fa326c6e12cff51f66acac10c81328 425 SUPERFAMILY SSF53756 57 420 1.88E-16 T 18-10-2018 CH53_1863 d2fa326c6e12cff51f66acac10c81328 425 Gene3D G3DSA:3.40.50.2000 217 403 3.2E-66 T 18-10-2018 CH53_1863 d2fa326c6e12cff51f66acac10c81328 425 Pfam PF00534 Glycosyl transferases group 1 287 398 2.5E-10 T 18-10-2018 IPR001296 Glycosyl transferase, family 1 CH53_1863 d2fa326c6e12cff51f66acac10c81328 425 Gene3D G3DSA:3.40.50.11720 41 209 9.3E-48 T 18-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 CH53_1863 d2fa326c6e12cff51f66acac10c81328 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 7.8E-67 T 18-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 CH53_2824 ab23fa69c24d8950df7319701234af0d 439 Pfam PF05525 Branched-chain amino acid transport protein 7 425 1.4E-152 T 18-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CH53_2824 ab23fa69c24d8950df7319701234af0d 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 1.2E-155 T 18-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CH53_303 35467dc12c84d857c8fc00f3c285d03e 380 SUPERFAMILY SSF56601 35 359 1.98E-69 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CH53_303 35467dc12c84d857c8fc00f3c285d03e 380 Gene3D G3DSA:3.40.710.10 29 378 6.3E-134 T 18-10-2018 CH53_303 35467dc12c84d857c8fc00f3c285d03e 380 Pfam PF00144 Beta-lactamase 47 359 8.9E-63 T 18-10-2018 IPR001466 Beta-lactamase-related CH53_2352 6c1ba3ad5c379842d67b1e5bad405414 235 SMART SM00448 4 114 3.9E-41 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_2352 6c1ba3ad5c379842d67b1e5bad405414 235 Pfam PF00072 Response regulator receiver domain 7 115 6.2E-28 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_2352 6c1ba3ad5c379842d67b1e5bad405414 235 SMART SM00862 153 227 8.2E-12 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_2352 6c1ba3ad5c379842d67b1e5bad405414 235 SUPERFAMILY SSF52172 2 127 5.12E-40 T 18-10-2018 IPR011006 CheY-like superfamily CH53_2352 6c1ba3ad5c379842d67b1e5bad405414 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 227 2.1E-15 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_2352 6c1ba3ad5c379842d67b1e5bad405414 235 Gene3D G3DSA:1.10.10.10 130 233 1.5E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2352 6c1ba3ad5c379842d67b1e5bad405414 235 SUPERFAMILY SSF46894 127 228 9.92E-20 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_2352 6c1ba3ad5c379842d67b1e5bad405414 235 Gene3D G3DSA:3.40.50.2300 1 129 1.1E-35 T 18-10-2018 CH53_1969 ebbaaa2052b8d513d623bf170a194d78 428 Pfam PF00271 Helicase conserved C-terminal domain 243 351 2.4E-28 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_1969 ebbaaa2052b8d513d623bf170a194d78 428 Gene3D G3DSA:3.40.50.300 227 393 1.4E-44 T 18-10-2018 CH53_1969 ebbaaa2052b8d513d623bf170a194d78 428 SMART SM00490 270 351 4.5E-30 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_1969 ebbaaa2052b8d513d623bf170a194d78 428 SMART SM00487 28 234 5.6E-52 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH53_1969 ebbaaa2052b8d513d623bf170a194d78 428 Pfam PF00270 DEAD/DEAH box helicase 33 206 4.8E-45 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CH53_1969 ebbaaa2052b8d513d623bf170a194d78 428 SUPERFAMILY SSF52540 84 363 1.03E-68 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1969 ebbaaa2052b8d513d623bf170a194d78 428 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 18-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CH53_1969 ebbaaa2052b8d513d623bf170a194d78 428 Gene3D G3DSA:3.40.50.300 2 222 7.1E-68 T 18-10-2018 CH53_1969 ebbaaa2052b8d513d623bf170a194d78 428 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.403 T 18-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 CH53_3294 2a38bd4f3de568471059db098a248a31 231 Pfam PF04172 LrgB-like family 12 223 1.9E-78 T 18-10-2018 IPR007300 CidB/LrgB family CH53_3294 2a38bd4f3de568471059db098a248a31 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 4 226 2.4E-99 T 18-10-2018 IPR005261 Conserved hypothetical protein CHP00659 CH53_3618 5e07efec382acb881e06c4abde19dd2f 112 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 14 111 1.0E-31 T 18-10-2018 IPR009707 Membrane protein GlpM/YdgC CH53_3618 5e07efec382acb881e06c4abde19dd2f 112 Pfam PF06942 GlpM protein 5 111 2.8E-51 T 18-10-2018 IPR009707 Membrane protein GlpM/YdgC CH53_3313 b271fdcbf3ecc208e6d97fd352d2becb 306 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 7 160 9.4E-24 T 18-10-2018 IPR006342 Methyltransferase FkbM CH53_3313 b271fdcbf3ecc208e6d97fd352d2becb 306 SUPERFAMILY SSF53335 5 198 6.27E-32 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_3313 b271fdcbf3ecc208e6d97fd352d2becb 306 Gene3D G3DSA:3.40.50.150 1 209 2.8E-27 T 18-10-2018 CH53_3313 b271fdcbf3ecc208e6d97fd352d2becb 306 Pfam PF05050 Methyltransferase FkbM domain 9 158 1.9E-16 T 18-10-2018 IPR006342 Methyltransferase FkbM CH53_4359 0f4be073037902517daf84b2e36982ac 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 262 1.3E-22 T 18-10-2018 IPR000014 PAS domain CH53_4359 0f4be073037902517daf84b2e36982ac 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 399 528 1.2E-14 T 18-10-2018 IPR000014 PAS domain CH53_4359 0f4be073037902517daf84b2e36982ac 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 390 2.1E-15 T 18-10-2018 IPR000014 PAS domain CH53_4359 0f4be073037902517daf84b2e36982ac 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 134 1.1E-16 T 18-10-2018 IPR000014 PAS domain CH53_4359 0f4be073037902517daf84b2e36982ac 693 Gene3D G3DSA:3.30.70.270 521 692 2.3E-53 T 18-10-2018 CH53_4359 0f4be073037902517daf84b2e36982ac 693 Pfam PF00989 PAS fold 402 518 4.5E-13 T 18-10-2018 IPR013767 PAS fold GO:0006355 CH53_4359 0f4be073037902517daf84b2e36982ac 693 Pfam PF00989 PAS fold 14 123 6.2E-12 T 18-10-2018 IPR013767 PAS fold GO:0006355 CH53_4359 0f4be073037902517daf84b2e36982ac 693 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 528 690 1.2E-41 T 18-10-2018 IPR000160 GGDEF domain CH53_4359 0f4be073037902517daf84b2e36982ac 693 SUPERFAMILY SSF55785 123 250 1.93E-25 T 18-10-2018 IPR035965 PAS domain superfamily CH53_4359 0f4be073037902517daf84b2e36982ac 693 SUPERFAMILY SSF55785 381 519 5.23E-18 T 18-10-2018 IPR035965 PAS domain superfamily CH53_4359 0f4be073037902517daf84b2e36982ac 693 SMART SM00086 341 383 0.13 T 18-10-2018 IPR001610 PAC motif CH53_4359 0f4be073037902517daf84b2e36982ac 693 SMART SM00086 483 521 100.0 T 18-10-2018 IPR001610 PAC motif CH53_4359 0f4be073037902517daf84b2e36982ac 693 SMART SM00086 85 127 54.0 T 18-10-2018 IPR001610 PAC motif CH53_4359 0f4be073037902517daf84b2e36982ac 693 SMART SM00086 213 255 0.26 T 18-10-2018 IPR001610 PAC motif CH53_4359 0f4be073037902517daf84b2e36982ac 693 Pfam PF13426 PAS domain 279 382 8.9E-12 T 18-10-2018 IPR000014 PAS domain CH53_4359 0f4be073037902517daf84b2e36982ac 693 Pfam PF13426 PAS domain 152 254 1.2E-13 T 18-10-2018 IPR000014 PAS domain CH53_4359 0f4be073037902517daf84b2e36982ac 693 Gene3D G3DSA:3.30.450.20 394 519 3.8E-22 T 18-10-2018 CH53_4359 0f4be073037902517daf84b2e36982ac 693 SUPERFAMILY SSF55785 251 378 8.38E-28 T 18-10-2018 IPR035965 PAS domain superfamily CH53_4359 0f4be073037902517daf84b2e36982ac 693 Pfam PF00990 Diguanylate cyclase, GGDEF domain 532 688 8.7E-45 T 18-10-2018 IPR000160 GGDEF domain CH53_4359 0f4be073037902517daf84b2e36982ac 693 SMART SM00267 521 692 1.2E-53 T 18-10-2018 IPR000160 GGDEF domain CH53_4359 0f4be073037902517daf84b2e36982ac 693 SUPERFAMILY SSF55785 24 136 1.47E-20 T 18-10-2018 IPR035965 PAS domain superfamily CH53_4359 0f4be073037902517daf84b2e36982ac 693 Gene3D G3DSA:3.30.450.20 268 393 9.3E-25 T 18-10-2018 CH53_4359 0f4be073037902517daf84b2e36982ac 693 SMART SM00091 402 468 5.9E-8 T 18-10-2018 IPR000014 PAS domain CH53_4359 0f4be073037902517daf84b2e36982ac 693 SMART SM00091 140 206 0.0069 T 18-10-2018 IPR000014 PAS domain CH53_4359 0f4be073037902517daf84b2e36982ac 693 SMART SM00091 267 335 0.0075 T 18-10-2018 IPR000014 PAS domain CH53_4359 0f4be073037902517daf84b2e36982ac 693 SMART SM00091 11 80 6.5E-7 T 18-10-2018 IPR000014 PAS domain CH53_4359 0f4be073037902517daf84b2e36982ac 693 Gene3D G3DSA:3.30.450.20 144 267 3.8E-27 T 18-10-2018 CH53_4359 0f4be073037902517daf84b2e36982ac 693 Gene3D G3DSA:3.30.450.20 8 143 1.2E-24 T 18-10-2018 CH53_4359 0f4be073037902517daf84b2e36982ac 693 SUPERFAMILY SSF55073 537 689 6.51E-44 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_756 5af7e321f36a6278a8d39e131763da3a 393 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 200 365 6.8E-26 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_756 5af7e321f36a6278a8d39e131763da3a 393 Gene3D G3DSA:1.10.3720.10 177 366 6.1E-38 T 18-10-2018 IPR035906 MetI-like superfamily CH53_756 5af7e321f36a6278a8d39e131763da3a 393 SUPERFAMILY SSF161098 179 361 9.29E-43 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3811 0aa4f2c4c17be91a617323f7f5f58298 494 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 12 492 1.1E-200 T 18-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CH53_3811 0aa4f2c4c17be91a617323f7f5f58298 494 Gene3D G3DSA:3.40.50.720 15 440 6.1E-169 T 18-10-2018 CH53_3811 0aa4f2c4c17be91a617323f7f5f58298 494 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 12 492 91.367 T 18-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CH53_3811 0aa4f2c4c17be91a617323f7f5f58298 494 SUPERFAMILY SSF55347 179 491 6.21E-113 T 18-10-2018 CH53_3811 0aa4f2c4c17be91a617323f7f5f58298 494 SUPERFAMILY SSF51735 7 192 4.33E-58 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3811 0aa4f2c4c17be91a617323f7f5f58298 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 145 158 7.0E-48 T 18-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CH53_3811 0aa4f2c4c17be91a617323f7f5f58298 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 221 238 7.0E-48 T 18-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CH53_3811 0aa4f2c4c17be91a617323f7f5f58298 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 169 197 7.0E-48 T 18-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CH53_3811 0aa4f2c4c17be91a617323f7f5f58298 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 239 255 7.0E-48 T 18-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CH53_3811 0aa4f2c4c17be91a617323f7f5f58298 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 330 356 7.0E-48 T 18-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CH53_3811 0aa4f2c4c17be91a617323f7f5f58298 494 Gene3D G3DSA:3.30.360.10 179 479 6.1E-169 T 18-10-2018 CH53_3811 0aa4f2c4c17be91a617323f7f5f58298 494 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 179 185 - T 18-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CH53_3811 0aa4f2c4c17be91a617323f7f5f58298 494 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 491 1.5E-115 T 18-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CH53_3811 0aa4f2c4c17be91a617323f7f5f58298 494 PIRSF PIRSF000110 1 494 3.8E-184 T 18-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CH53_3811 0aa4f2c4c17be91a617323f7f5f58298 494 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 16 189 1.1E-59 T 18-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CH53_603 9f66c25074712a0576eb3a55e4a1da5a 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 230 2.2E-23 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_603 9f66c25074712a0576eb3a55e4a1da5a 239 SUPERFAMILY SSF52172 12 189 1.76E-38 T 18-10-2018 IPR011006 CheY-like superfamily CH53_603 9f66c25074712a0576eb3a55e4a1da5a 239 Gene3D G3DSA:3.40.50.2300 2 139 1.2E-34 T 18-10-2018 CH53_603 9f66c25074712a0576eb3a55e4a1da5a 239 Gene3D G3DSA:1.10.10.10 141 238 1.8E-34 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_603 9f66c25074712a0576eb3a55e4a1da5a 239 SMART SM00448 12 122 2.4E-38 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_603 9f66c25074712a0576eb3a55e4a1da5a 239 Pfam PF00072 Response regulator receiver domain 14 122 3.6E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_603 9f66c25074712a0576eb3a55e4a1da5a 239 SMART SM00862 155 231 6.7E-26 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_4203 9a3b38a8fefd1ee7e1b4fcb6eccbb8c6 169 SUPERFAMILY SSF88723 6 128 1.32E-5 T 18-10-2018 IPR029060 PIN-like domain superfamily CH53_4203 9a3b38a8fefd1ee7e1b4fcb6eccbb8c6 169 Pfam PF14367 Domain of unknown function (DUF4411) 6 160 3.3E-38 T 18-10-2018 IPR016541 Uncharacterised conserved protein UCP008505 CH53_717 1145681565cb11a67f9b97b93067942a 371 SUPERFAMILY SSF50952 21 363 6.15E-48 T 18-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 CH53_717 1145681565cb11a67f9b97b93067942a 371 Gene3D G3DSA:2.120.10.30 14 363 3.4E-134 T 18-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CH53_717 1145681565cb11a67f9b97b93067942a 371 Pfam PF07995 Glucose / Sorbosone dehydrogenase 29 361 1.7E-134 T 18-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase CH53_3369 3fec7847bdc0881173e1601ddee462b4 93 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 22 41 - T 18-10-2018 IPR020808 Bacterial microcompartments protein, conserved site CH53_3369 3fec7847bdc0881173e1601ddee462b4 93 SUPERFAMILY SSF143414 4 90 1.1E-32 T 18-10-2018 IPR037233 CcmK-like superfamily CH53_3369 3fec7847bdc0881173e1601ddee462b4 93 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 48 1.0E-18 T 18-10-2018 CH53_3369 3fec7847bdc0881173e1601ddee462b4 93 Gene3D G3DSA:3.30.70.1710 1 93 4.6E-43 T 18-10-2018 CH53_3369 3fec7847bdc0881173e1601ddee462b4 93 Pfam PF00936 BMC domain 5 80 1.3E-29 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_3369 3fec7847bdc0881173e1601ddee462b4 93 SMART SM00877 4 80 1.3E-36 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_1520 a29bbfb93a65de95625a4d09f6081804 710 Pfam PF13515 Fusaric acid resistance protein-like 386 506 1.1E-21 T 18-10-2018 CH53_1520 a29bbfb93a65de95625a4d09f6081804 710 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 19 690 2.0E-162 T 18-10-2018 IPR010020 Integral membrane protein, YccS/YhfK CH53_1520 a29bbfb93a65de95625a4d09f6081804 710 Pfam PF12805 FUSC-like inner membrane protein yccS 70 338 1.7E-68 T 18-10-2018 IPR032692 Integral membrane protein YccS, N-terminal CH53_3188 6748a798c2f4c7a267e96918fc5a35ba 236 SMART SM00382 26 218 2.4E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3188 6748a798c2f4c7a267e96918fc5a35ba 236 Pfam PF00005 ABC transporter 19 164 1.2E-24 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3188 6748a798c2f4c7a267e96918fc5a35ba 236 Gene3D G3DSA:3.40.50.300 1 233 2.6E-51 T 18-10-2018 CH53_3188 6748a798c2f4c7a267e96918fc5a35ba 236 SUPERFAMILY SSF52540 2 228 1.19E-50 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2215 2e0b69cd16cdfbaa658d51ba88b6fea7 182 Gene3D G3DSA:1.10.60.30 35 109 8.9E-21 T 18-10-2018 CH53_2215 2e0b69cd16cdfbaa658d51ba88b6fea7 182 SUPERFAMILY SSF158710 36 178 7.06E-51 T 18-10-2018 IPR023153 PSPTO4464-like domain superfamily CH53_2215 2e0b69cd16cdfbaa658d51ba88b6fea7 182 Pfam PF04751 Protein of unknown function (DUF615) 25 175 5.8E-56 T 18-10-2018 IPR006839 Ribosome-associated, YjgA CH53_2215 2e0b69cd16cdfbaa658d51ba88b6fea7 182 PIRSF PIRSF016183 10 182 2.9E-72 T 18-10-2018 IPR006839 Ribosome-associated, YjgA CH53_2215 2e0b69cd16cdfbaa658d51ba88b6fea7 182 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 15 179 23.906 T 18-10-2018 IPR006839 Ribosome-associated, YjgA CH53_2215 2e0b69cd16cdfbaa658d51ba88b6fea7 182 Gene3D G3DSA:1.10.60.30 111 182 5.4E-29 T 18-10-2018 CH53_2301 41bcb37f5859a2d7a64c3f51ea44eac1 496 SMART SM00858 11 82 9.1E-12 T 18-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CH53_2301 41bcb37f5859a2d7a64c3f51ea44eac1 496 Pfam PF08666 SAF domain 11 80 1.6E-11 T 18-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CH53_2301 41bcb37f5859a2d7a64c3f51ea44eac1 496 Gene3D G3DSA:3.90.1210.30 3 85 1.4E-24 T 18-10-2018 CH53_2301 41bcb37f5859a2d7a64c3f51ea44eac1 496 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 108 495 1.3E-155 T 18-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CH53_1158 b3ddb738e41404fc6429e7dfe4601793 526 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 279 463 2.6E-19 T 18-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CH53_1158 b3ddb738e41404fc6429e7dfe4601793 526 PIRSF PIRSF000538 7 515 5.6E-114 T 18-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_1158 b3ddb738e41404fc6429e7dfe4601793 526 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 9 256 3.2E-48 T 18-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CH53_1158 b3ddb738e41404fc6429e7dfe4601793 526 SUPERFAMILY SSF53067 9 259 2.96E-58 T 18-10-2018 CH53_1158 b3ddb738e41404fc6429e7dfe4601793 526 Hamap MF_02053 Autoinducer-2 kinase [lsrK]. 11 526 87.739 T 18-10-2018 IPR033676 Autoinducer-2 kinase GO:0009372|GO:0071518 CH53_1158 b3ddb738e41404fc6429e7dfe4601793 526 SUPERFAMILY SSF53067 258 508 1.94E-47 T 18-10-2018 CH53_1158 b3ddb738e41404fc6429e7dfe4601793 526 Gene3D G3DSA:3.30.420.40 254 515 3.5E-51 T 18-10-2018 CH53_1158 b3ddb738e41404fc6429e7dfe4601793 526 Gene3D G3DSA:3.30.420.40 5 253 1.9E-61 T 18-10-2018 CH53_4068 9c05e1719027192099f01dc7cf3d36dd 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 2.9E-6 T 18-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CH53_4068 9c05e1719027192099f01dc7cf3d36dd 296 Gene3D G3DSA:1.10.3720.10 85 293 1.5E-16 T 18-10-2018 IPR035906 MetI-like superfamily CH53_4068 9c05e1719027192099f01dc7cf3d36dd 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 295 3.2E-21 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_4068 9c05e1719027192099f01dc7cf3d36dd 296 SUPERFAMILY SSF161098 90 277 1.16E-20 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2188 b35aa6e9977e10a02a1243efe8e50ad3 98 SUPERFAMILY SSF46689 4 98 5.38E-27 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_2188 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_2188 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_2188 b35aa6e9977e10a02a1243efe8e50ad3 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-35 T 18-10-2018 CH53_2188 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 5.1E-34 T 18-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CH53_2188 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 5.1E-34 T 18-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CH53_2188 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 5.1E-34 T 18-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CH53_2188 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 5.1E-34 T 18-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CH53_2188 b35aa6e9977e10a02a1243efe8e50ad3 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.512 T 18-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CH53_2188 b35aa6e9977e10a02a1243efe8e50ad3 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.8E-14 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_2188 b35aa6e9977e10a02a1243efe8e50ad3 98 PIRSF PIRSF002097 1 98 7.0E-47 T 18-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CH53_3785 3e635ae1205aa018575c926e91fed4cc 213 SUPERFAMILY SSF46785 88 169 1.99E-26 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3785 3e635ae1205aa018575c926e91fed4cc 213 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 209 33.854 T 18-10-2018 IPR007432 Protein of unknown function DUF480 CH53_3785 3e635ae1205aa018575c926e91fed4cc 213 Pfam PF04337 Protein of unknown function, DUF480 5 156 3.7E-62 T 18-10-2018 IPR007432 Protein of unknown function DUF480 CH53_3785 3e635ae1205aa018575c926e91fed4cc 213 SUPERFAMILY SSF46785 3 82 1.25E-33 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3785 3e635ae1205aa018575c926e91fed4cc 213 Gene3D G3DSA:1.10.10.10 1 87 3.8E-36 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3785 3e635ae1205aa018575c926e91fed4cc 213 Gene3D G3DSA:1.10.10.10 93 171 6.6E-28 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_406 9c90b4b24fbdfa2a76377a4cc3c8cc16 505 Pfam PF13522 Glutamine amidotransferase domain 65 210 1.8E-15 T 18-10-2018 CH53_406 9c90b4b24fbdfa2a76377a4cc3c8cc16 505 Gene3D G3DSA:3.60.20.10 2 414 3.0E-161 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CH53_406 9c90b4b24fbdfa2a76377a4cc3c8cc16 505 PIRSF PIRSF000485 1 483 9.9E-170 T 18-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CH53_406 9c90b4b24fbdfa2a76377a4cc3c8cc16 505 SUPERFAMILY SSF56235 2 259 7.12E-76 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CH53_406 9c90b4b24fbdfa2a76377a4cc3c8cc16 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.73 T 18-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CH53_406 9c90b4b24fbdfa2a76377a4cc3c8cc16 505 Pfam PF00156 Phosphoribosyl transferase domain 292 394 8.3E-8 T 18-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CH53_406 9c90b4b24fbdfa2a76377a4cc3c8cc16 505 Gene3D G3DSA:3.40.50.2020 279 443 3.0E-161 T 18-10-2018 CH53_406 9c90b4b24fbdfa2a76377a4cc3c8cc16 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 7.5E-162 T 18-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CH53_406 9c90b4b24fbdfa2a76377a4cc3c8cc16 505 SUPERFAMILY SSF53271 252 485 1.08E-72 T 18-10-2018 IPR029057 Phosphoribosyltransferase-like CH53_735 a98f5031987c86699bfd034e3590792f 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 317 3.4E-38 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_735 a98f5031987c86699bfd034e3590792f 322 SUPERFAMILY SSF161098 92 302 3.92E-17 T 18-10-2018 IPR035906 MetI-like superfamily CH53_735 a98f5031987c86699bfd034e3590792f 322 Gene3D G3DSA:1.10.3720.10 87 316 1.2E-17 T 18-10-2018 IPR035906 MetI-like superfamily CH53_662 1e929a88e07fba04ea99e462ea391b5c 112 SMART SM00938 4 105 9.7E-69 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CH53_662 1e929a88e07fba04ea99e462ea391b5c 112 PIRSF PIRSF039144 1 112 4.5E-58 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CH53_662 1e929a88e07fba04ea99e462ea391b5c 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 18-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CH53_662 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 83 103 1.2E-44 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CH53_662 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 2 17 1.2E-44 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CH53_662 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 23 41 1.2E-44 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CH53_662 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 52 75 1.2E-44 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CH53_662 1e929a88e07fba04ea99e462ea391b5c 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.4E-44 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CH53_662 1e929a88e07fba04ea99e462ea391b5c 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 18-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CH53_662 1e929a88e07fba04ea99e462ea391b5c 112 Gene3D G3DSA:3.30.70.120 1 112 7.8E-49 T 18-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CH53_662 1e929a88e07fba04ea99e462ea391b5c 112 SUPERFAMILY SSF54913 1 112 5.4E-47 T 18-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CH53_1604 d9b849045442aa9cdc3510db32135074 400 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 392 1.4E-127 T 18-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CH53_1604 d9b849045442aa9cdc3510db32135074 400 SUPERFAMILY SSF51905 3 395 1.42E-56 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1604 d9b849045442aa9cdc3510db32135074 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 5.4E-8 T 18-10-2018 CH53_1604 d9b849045442aa9cdc3510db32135074 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 5.4E-8 T 18-10-2018 CH53_1604 d9b849045442aa9cdc3510db32135074 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 5.4E-8 T 18-10-2018 CH53_1604 d9b849045442aa9cdc3510db32135074 400 SUPERFAMILY SSF160996 190 338 6.15E-43 T 18-10-2018 CH53_1604 d9b849045442aa9cdc3510db32135074 400 Gene3D G3DSA:3.50.50.60 7 388 6.6E-127 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1604 d9b849045442aa9cdc3510db32135074 400 Pfam PF03486 HI0933-like protein 4 392 1.3E-154 T 18-10-2018 CH53_1604 d9b849045442aa9cdc3510db32135074 400 Gene3D G3DSA:1.10.8.260 262 322 6.6E-127 T 18-10-2018 IPR023166 HI0933-like insert domain superfamily CH53_1604 d9b849045442aa9cdc3510db32135074 400 Gene3D G3DSA:2.40.30.10 188 339 6.6E-127 T 18-10-2018 CH53_1604 d9b849045442aa9cdc3510db32135074 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 7.9E-5 T 18-10-2018 CH53_1604 d9b849045442aa9cdc3510db32135074 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.9E-5 T 18-10-2018 CH53_357 8bad21b85db35aeb742adde7bf57ae26 557 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 167 2.9E-27 T 18-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CH53_357 8bad21b85db35aeb742adde7bf57ae26 557 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 554 32.353 T 18-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CH53_357 8bad21b85db35aeb742adde7bf57ae26 557 PIRSF PIRSF004983 1 557 1.2E-176 T 18-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CH53_357 8bad21b85db35aeb742adde7bf57ae26 557 SUPERFAMILY SSF52518 7 179 6.96E-32 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_357 8bad21b85db35aeb742adde7bf57ae26 557 Gene3D G3DSA:3.40.50.970 352 557 7.3E-62 T 18-10-2018 CH53_357 8bad21b85db35aeb742adde7bf57ae26 557 Gene3D G3DSA:3.40.50.1220 212 337 2.8E-44 T 18-10-2018 CH53_357 8bad21b85db35aeb742adde7bf57ae26 557 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 389 1.5E-84 T 18-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CH53_357 8bad21b85db35aeb742adde7bf57ae26 557 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 420 536 2.8E-7 T 18-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CH53_357 8bad21b85db35aeb742adde7bf57ae26 557 Gene3D G3DSA:3.40.50.970 1 196 9.5E-62 T 18-10-2018 CH53_357 8bad21b85db35aeb742adde7bf57ae26 557 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 431 1.8E-138 T 18-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CH53_357 8bad21b85db35aeb742adde7bf57ae26 557 SUPERFAMILY SSF52518 365 553 1.04E-32 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_3066 5bc08ede560fdd437a8841c520d6c281 105 Gene3D G3DSA:3.30.460.10 2 105 8.3E-36 T 18-10-2018 CH53_3066 5bc08ede560fdd437a8841c520d6c281 105 SUPERFAMILY SSF81301 4 105 5.72E-37 T 18-10-2018 CH53_3066 5bc08ede560fdd437a8841c520d6c281 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 1.1E-37 T 18-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CH53_3066 5bc08ede560fdd437a8841c520d6c281 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 2.7E-28 T 18-10-2018 CH53_3066 5bc08ede560fdd437a8841c520d6c281 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.816 T 18-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CH53_343 4d541e0101a3cd59ba3f4077be55aacc 85 Gene3D G3DSA:3.10.20.30 1 85 5.8E-19 T 18-10-2018 IPR012675 Beta-grasp domain superfamily CH53_343 4d541e0101a3cd59ba3f4077be55aacc 85 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 77 7.6E-11 T 18-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CH53_343 4d541e0101a3cd59ba3f4077be55aacc 85 SUPERFAMILY SSF54292 4 85 1.7E-20 T 18-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CH53_343 4d541e0101a3cd59ba3f4077be55aacc 85 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 18-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CH53_1725 c71d56e61074040891c6f2be43eebafe 532 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 123 527 5.0E-133 T 18-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 CH53_1725 c71d56e61074040891c6f2be43eebafe 532 Gene3D G3DSA:2.40.170.10 116 532 5.2E-88 T 18-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 CH53_1725 c71d56e61074040891c6f2be43eebafe 532 Pfam PF11471 Maltoporin periplasmic N-terminal extension 8 56 1.0E-10 T 18-10-2018 IPR021570 LamB-type porin N-terminal domain CH53_1725 c71d56e61074040891c6f2be43eebafe 532 Pfam PF02264 LamB porin 118 532 2.9E-75 T 18-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 CH53_1725 c71d56e61074040891c6f2be43eebafe 532 SUPERFAMILY SSF56935 116 532 1.22E-100 T 18-10-2018 CH53_2716 fdec09a0a18c5fce16cefb41270f19a2 129 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.455 T 18-10-2018 IPR020911 Uncharacterised protein family UPF0325 CH53_2716 fdec09a0a18c5fce16cefb41270f19a2 129 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 4.9E-55 T 18-10-2018 IPR020911 Uncharacterised protein family UPF0325 CH53_2716 fdec09a0a18c5fce16cefb41270f19a2 129 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 4.0E-65 T 18-10-2018 IPR020911 Uncharacterised protein family UPF0325 CH53_1635 202fb699acee1f9445acb1011393b52a 875 Gene3D G3DSA:3.90.550.10 265 486 4.3E-78 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_1635 202fb699acee1f9445acb1011393b52a 875 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 149 832 2.1E-285 T 18-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CH53_1635 202fb699acee1f9445acb1011393b52a 875 SUPERFAMILY SSF53448 275 553 2.69E-52 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_1635 202fb699acee1f9445acb1011393b52a 875 Pfam PF03552 Cellulose synthase 455 578 5.7E-13 T 18-10-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 CH53_1635 202fb699acee1f9445acb1011393b52a 875 PRINTS PR01439 Cellulose synthase subunit A signature 285 304 6.8E-58 T 18-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CH53_1635 202fb699acee1f9445acb1011393b52a 875 PRINTS PR01439 Cellulose synthase subunit A signature 230 255 6.8E-58 T 18-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CH53_1635 202fb699acee1f9445acb1011393b52a 875 PRINTS PR01439 Cellulose synthase subunit A signature 366 390 6.8E-58 T 18-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CH53_1635 202fb699acee1f9445acb1011393b52a 875 PRINTS PR01439 Cellulose synthase subunit A signature 202 222 6.8E-58 T 18-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CH53_1635 202fb699acee1f9445acb1011393b52a 875 PRINTS PR01439 Cellulose synthase subunit A signature 527 553 6.8E-58 T 18-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CH53_1635 202fb699acee1f9445acb1011393b52a 875 PRINTS PR01439 Cellulose synthase subunit A signature 670 691 6.8E-58 T 18-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CH53_1635 202fb699acee1f9445acb1011393b52a 875 PRINTS PR01439 Cellulose synthase subunit A signature 556 575 6.8E-58 T 18-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CH53_1635 202fb699acee1f9445acb1011393b52a 875 PRINTS PR01439 Cellulose synthase subunit A signature 596 615 6.8E-58 T 18-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CH53_1635 202fb699acee1f9445acb1011393b52a 875 SUPERFAMILY SSF141371 699 785 1.18E-6 T 18-10-2018 CH53_1635 202fb699acee1f9445acb1011393b52a 875 Pfam PF07238 PilZ domain 697 793 2.9E-9 T 18-10-2018 IPR009875 PilZ domain GO:0035438 CH53_1635 202fb699acee1f9445acb1011393b52a 875 Gene3D G3DSA:2.40.10.220 693 802 3.1E-12 T 18-10-2018 CH53_1635 202fb699acee1f9445acb1011393b52a 875 Pfam PF00535 Glycosyl transferase family 2 281 449 3.2E-32 T 18-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CH53_3550 61ac811edd2150a32f09abe6fef74b9c 226 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 92 224 5.8E-41 T 18-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CH53_3550 61ac811edd2150a32f09abe6fef74b9c 226 Gene3D G3DSA:2.30.30.760 167 226 1.1E-25 T 18-10-2018 CH53_3550 61ac811edd2150a32f09abe6fef74b9c 226 SMART SM00858 102 164 1.7E-11 T 18-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CH53_3550 61ac811edd2150a32f09abe6fef74b9c 226 Pfam PF13144 Chaperone for flagella basal body P-ring formation 32 224 9.3E-51 T 18-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CH53_2298 2a65e9b0175e3c991a00a4db781a41a6 433 Pfam PF07690 Major Facilitator Superfamily 17 308 8.9E-47 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_2298 2a65e9b0175e3c991a00a4db781a41a6 433 Gene3D G3DSA:1.20.1250.20 1 198 3.3E-46 T 18-10-2018 CH53_2298 2a65e9b0175e3c991a00a4db781a41a6 433 SUPERFAMILY SSF103473 3 412 1.44E-78 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_2298 2a65e9b0175e3c991a00a4db781a41a6 433 Gene3D G3DSA:1.20.1250.20 214 417 5.0E-26 T 18-10-2018 CH53_3314 2ef98d9fc9c4f3571089fb241871a984 251 Gene3D G3DSA:3.90.550.10 3 248 2.6E-64 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_3314 2ef98d9fc9c4f3571089fb241871a984 251 SUPERFAMILY SSF53448 4 236 6.31E-33 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_3314 2ef98d9fc9c4f3571089fb241871a984 251 Pfam PF00483 Nucleotidyl transferase 8 176 4.4E-10 T 18-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CH53_3314 2ef98d9fc9c4f3571089fb241871a984 251 PIRSF PIRSF028162 3 242 1.5E-82 T 18-10-2018 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted CH53_261 d8a599ef299510d535e523810695604f 341 Gene3D G3DSA:1.10.3720.10 131 335 1.1E-15 T 18-10-2018 IPR035906 MetI-like superfamily CH53_261 d8a599ef299510d535e523810695604f 341 SUPERFAMILY SSF161098 136 321 8.63E-18 T 18-10-2018 IPR035906 MetI-like superfamily CH53_261 d8a599ef299510d535e523810695604f 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 10 50 2.3E-8 T 18-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CH53_261 d8a599ef299510d535e523810695604f 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 1.6E-27 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_844 c7ebaeef07a4bb1fdbea4f04d166f071 493 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 18-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_844 c7ebaeef07a4bb1fdbea4f04d166f071 493 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 358 378 - T 18-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_844 c7ebaeef07a4bb1fdbea4f04d166f071 493 Hamap MF_00986 L-fuculokinase [fucK]. 3 470 61.257 T 18-10-2018 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 CH53_844 c7ebaeef07a4bb1fdbea4f04d166f071 493 TIGRFAM TIGR02628 fuculo_kin_coli: L-fuculokinase 5 469 3.0E-204 T 18-10-2018 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 CH53_844 c7ebaeef07a4bb1fdbea4f04d166f071 493 SUPERFAMILY SSF53067 6 252 1.99E-56 T 18-10-2018 CH53_844 c7ebaeef07a4bb1fdbea4f04d166f071 493 SUPERFAMILY SSF53067 256 471 5.99E-39 T 18-10-2018 CH53_844 c7ebaeef07a4bb1fdbea4f04d166f071 493 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 441 2.1E-23 T 18-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CH53_844 c7ebaeef07a4bb1fdbea4f04d166f071 493 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 249 3.3E-73 T 18-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CH53_844 c7ebaeef07a4bb1fdbea4f04d166f071 493 PIRSF PIRSF000538 3 484 3.1E-81 T 18-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_844 c7ebaeef07a4bb1fdbea4f04d166f071 493 Gene3D G3DSA:3.30.420.40 1 241 6.5E-59 T 18-10-2018 CH53_844 c7ebaeef07a4bb1fdbea4f04d166f071 493 Gene3D G3DSA:3.30.420.40 242 485 1.1E-39 T 18-10-2018 CH53_2731 8d696a81ffeca8d88ab8bfaf1249271c 172 SUPERFAMILY SSF54637 10 151 2.88E-50 T 18-10-2018 IPR029069 HotDog domain superfamily CH53_2731 8d696a81ffeca8d88ab8bfaf1249271c 172 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.148 T 18-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CH53_2731 8d696a81ffeca8d88ab8bfaf1249271c 172 Pfam PF07977 FabA-like domain 17 141 2.5E-40 T 18-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CH53_2731 8d696a81ffeca8d88ab8bfaf1249271c 172 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 8.7E-60 T 18-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CH53_2731 8d696a81ffeca8d88ab8bfaf1249271c 172 Gene3D G3DSA:3.10.129.10 5 148 7.3E-68 T 18-10-2018 CH53_3828 8188d8c1bc30c0a8e503c9d1f810392a 148 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 40.574 T 18-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 CH53_3828 8188d8c1bc30c0a8e503c9d1f810392a 148 PIRSF PIRSF006173 1 145 6.5E-65 T 18-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 CH53_3828 8188d8c1bc30c0a8e503c9d1f810392a 148 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 2.4E-7 T 18-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CH53_1972 37315196968da0018a85ab1052a412f1 365 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 29.213 T 18-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 CH53_1972 37315196968da0018a85ab1052a412f1 365 Pfam PF00953 Glycosyl transferase family 4 75 232 5.4E-28 T 18-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 CH53_1972 37315196968da0018a85ab1052a412f1 365 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 351 1.5E-165 T 18-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 CH53_2159 96316a442ab9ac2f607bd000e505f0f5 397 Pfam PF00155 Aminotransferase class I and II 27 392 7.9E-80 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_2159 96316a442ab9ac2f607bd000e505f0f5 397 Gene3D G3DSA:3.90.1150.10 11 392 1.6E-154 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_2159 96316a442ab9ac2f607bd000e505f0f5 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 4.0E-36 T 18-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CH53_2159 96316a442ab9ac2f607bd000e505f0f5 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 4.0E-36 T 18-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CH53_2159 96316a442ab9ac2f607bd000e505f0f5 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 4.0E-36 T 18-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CH53_2159 96316a442ab9ac2f607bd000e505f0f5 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 4.0E-36 T 18-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CH53_2159 96316a442ab9ac2f607bd000e505f0f5 397 SUPERFAMILY SSF53383 1 392 1.05E-116 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_2159 96316a442ab9ac2f607bd000e505f0f5 397 Gene3D G3DSA:3.40.640.10 60 301 1.6E-154 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_2159 96316a442ab9ac2f607bd000e505f0f5 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 18-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CH53_4108 0c3aa307a9fd06626756ed452e970368 452 Pfam PF02887 Pyruvate kinase, alpha/beta domain 338 450 4.2E-27 T 18-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_4108 0c3aa307a9fd06626756ed452e970368 452 Gene3D G3DSA:3.20.20.60 1 314 9.3E-137 T 18-10-2018 CH53_4108 0c3aa307a9fd06626756ed452e970368 452 SUPERFAMILY SSF50800 52 149 3.66E-29 T 18-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily CH53_4108 0c3aa307a9fd06626756ed452e970368 452 Gene3D G3DSA:3.40.1380.20 318 449 5.2E-43 T 18-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_4108 0c3aa307a9fd06626756ed452e970368 452 ProSitePatterns PS00110 Pyruvate kinase active site signature. 197 209 - T 18-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_4108 0c3aa307a9fd06626756ed452e970368 452 Gene3D G3DSA:2.40.33.10 53 149 9.3E-137 T 18-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_4108 0c3aa307a9fd06626756ed452e970368 452 SUPERFAMILY SSF52935 305 451 1.1E-32 T 18-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_4108 0c3aa307a9fd06626756ed452e970368 452 SUPERFAMILY SSF51621 1 320 1.4E-93 T 18-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CH53_4108 0c3aa307a9fd06626756ed452e970368 452 PRINTS PR01050 Pyruvate kinase family signature 251 275 1.8E-77 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_4108 0c3aa307a9fd06626756ed452e970368 452 PRINTS PR01050 Pyruvate kinase family signature 295 311 1.8E-77 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_4108 0c3aa307a9fd06626756ed452e970368 452 PRINTS PR01050 Pyruvate kinase family signature 199 225 1.8E-77 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_4108 0c3aa307a9fd06626756ed452e970368 452 PRINTS PR01050 Pyruvate kinase family signature 226 250 1.8E-77 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_4108 0c3aa307a9fd06626756ed452e970368 452 PRINTS PR01050 Pyruvate kinase family signature 41 57 1.8E-77 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_4108 0c3aa307a9fd06626756ed452e970368 452 PRINTS PR01050 Pyruvate kinase family signature 168 182 1.8E-77 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_4108 0c3aa307a9fd06626756ed452e970368 452 PRINTS PR01050 Pyruvate kinase family signature 276 294 1.8E-77 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_4108 0c3aa307a9fd06626756ed452e970368 452 Pfam PF00224 Pyruvate kinase, barrel domain 1 323 4.3E-143 T 18-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_4108 0c3aa307a9fd06626756ed452e970368 452 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 1 451 4.7E-174 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_929 8ba462afccb74fc0a9be7397a02070c9 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 18-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CH53_929 8ba462afccb74fc0a9be7397a02070c9 157 SUPERFAMILY SSF69765 1 156 2.49E-65 T 18-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CH53_929 8ba462afccb74fc0a9be7397a02070c9 157 Gene3D G3DSA:3.30.1330.50 1 157 1.9E-70 T 18-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CH53_929 8ba462afccb74fc0a9be7397a02070c9 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 2.4E-69 T 18-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CH53_929 8ba462afccb74fc0a9be7397a02070c9 157 Pfam PF02542 YgbB family 1 154 1.8E-65 T 18-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CH53_929 8ba462afccb74fc0a9be7397a02070c9 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.631 T 18-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CH53_3686 fc4899c5a8ff115986913615cc9681f8 253 Gene3D G3DSA:1.10.3480.10 3 135 5.6E-8 T 18-10-2018 CH53_3686 fc4899c5a8ff115986913615cc9681f8 253 SUPERFAMILY SSF89155 3 163 3.79E-32 T 18-10-2018 IPR036411 TorD-like superfamily CH53_3686 fc4899c5a8ff115986913615cc9681f8 253 Pfam PF02613 Nitrate reductase delta subunit 36 154 9.3E-12 T 18-10-2018 IPR020945 DMSO/Nitrate reductase chaperone CH53_3686 fc4899c5a8ff115986913615cc9681f8 253 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 161 1.1E-43 T 18-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 CH53_1623 f627449e78e7f6ef6c1bc47082d8006a 431 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 7.2E-30 T 18-10-2018 CH53_1623 f627449e78e7f6ef6c1bc47082d8006a 431 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 7.2E-30 T 18-10-2018 CH53_1623 f627449e78e7f6ef6c1bc47082d8006a 431 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 7.2E-30 T 18-10-2018 CH53_1623 f627449e78e7f6ef6c1bc47082d8006a 431 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 7.2E-30 T 18-10-2018 CH53_1623 f627449e78e7f6ef6c1bc47082d8006a 431 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 7.2E-30 T 18-10-2018 CH53_1623 f627449e78e7f6ef6c1bc47082d8006a 431 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 7.2E-30 T 18-10-2018 CH53_1623 f627449e78e7f6ef6c1bc47082d8006a 431 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 5.0E-112 T 18-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CH53_1623 f627449e78e7f6ef6c1bc47082d8006a 431 Gene3D G3DSA:1.10.3860.10 1 417 7.7E-121 T 18-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CH53_1623 f627449e78e7f6ef6c1bc47082d8006a 431 SUPERFAMILY SSF118215 9 401 2.62E-122 T 18-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CH53_1623 f627449e78e7f6ef6c1bc47082d8006a 431 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 18-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CH53_1623 f627449e78e7f6ef6c1bc47082d8006a 431 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 38.854 T 18-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 CH53_1623 f627449e78e7f6ef6c1bc47082d8006a 431 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 18-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CH53_4130 557d9c33d30b0118bbbe34a22ad28af5 113 SUPERFAMILY SSF103481 35 112 8.37E-14 T 18-10-2018 CH53_4130 557d9c33d30b0118bbbe34a22ad28af5 113 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 2 113 28.895 T 18-10-2018 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE CH53_4130 557d9c33d30b0118bbbe34a22ad28af5 113 Gene3D G3DSA:1.10.3730.20 1 113 4.1E-7 T 18-10-2018 CH53_4130 557d9c33d30b0118bbbe34a22ad28af5 113 Pfam PF00892 EamA-like transporter family 33 111 9.4E-10 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_3928 cbcaa77536ec88038c8fc8e04459ce41 773 SUPERFAMILY SSF53706 48 636 5.89E-146 T 18-10-2018 CH53_3928 cbcaa77536ec88038c8fc8e04459ce41 773 Gene3D G3DSA:2.40.40.20 645 767 7.2E-6 T 18-10-2018 CH53_3928 cbcaa77536ec88038c8fc8e04459ce41 773 Gene3D G3DSA:3.40.228.10 185 412 3.5E-75 T 18-10-2018 CH53_3928 cbcaa77536ec88038c8fc8e04459ce41 773 SUPERFAMILY SSF50692 647 767 2.94E-19 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CH53_3928 cbcaa77536ec88038c8fc8e04459ce41 773 PIRSF PIRSF000144 1 767 0.0 T 18-10-2018 CH53_3928 cbcaa77536ec88038c8fc8e04459ce41 773 Pfam PF01568 Molydopterin dinucleotide binding domain 650 757 7.9E-12 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CH53_3928 cbcaa77536ec88038c8fc8e04459ce41 773 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 762 1.7E-284 T 18-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 CH53_3928 cbcaa77536ec88038c8fc8e04459ce41 773 Pfam PF00384 Molybdopterin oxidoreductase 109 497 5.4E-24 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3928 cbcaa77536ec88038c8fc8e04459ce41 773 Gene3D G3DSA:3.40.50.740 119 517 3.5E-75 T 18-10-2018 CH53_392 96d88b95103d6ab3145ad2efd607c86a 717 SUPERFAMILY SSF75138 229 353 1.57E-25 T 18-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CH53_392 96d88b95103d6ab3145ad2efd607c86a 717 Gene3D G3DSA:3.40.1390.20 226 365 3.2E-14 T 18-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CH53_392 96d88b95103d6ab3145ad2efd607c86a 717 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 3.3E-136 T 18-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CH53_392 96d88b95103d6ab3145ad2efd607c86a 717 PIRSF PIRSF006107 1 714 0.0 T 18-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CH53_392 96d88b95103d6ab3145ad2efd607c86a 717 Gene3D G3DSA:3.40.50.10750 529 682 1.8E-135 T 18-10-2018 CH53_392 96d88b95103d6ab3145ad2efd607c86a 717 SUPERFAMILY SSF53659 392 709 8.22E-94 T 18-10-2018 CH53_392 96d88b95103d6ab3145ad2efd607c86a 717 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 1.1E-127 T 18-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CH53_392 96d88b95103d6ab3145ad2efd607c86a 717 Gene3D G3DSA:3.40.50.300 1 225 2.4E-12 T 18-10-2018 CH53_392 96d88b95103d6ab3145ad2efd607c86a 717 Pfam PF13500 AAA domain 3 229 5.7E-51 T 18-10-2018 CH53_392 96d88b95103d6ab3145ad2efd607c86a 717 Pfam PF07085 DRTGG domain 233 344 6.7E-29 T 18-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CH53_392 96d88b95103d6ab3145ad2efd607c86a 717 SUPERFAMILY SSF52540 3 239 1.22E-27 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_392 96d88b95103d6ab3145ad2efd607c86a 717 Gene3D G3DSA:3.40.50.10950 398 708 1.8E-135 T 18-10-2018 CH53_2727 861d5b8c7f9e5fcebf84b7c88e770487 451 Gene3D G3DSA:2.30.42.10 126 220 4.0E-33 T 18-10-2018 CH53_2727 861d5b8c7f9e5fcebf84b7c88e770487 451 SMART SM00228 211 280 1.6E-7 T 18-10-2018 IPR001478 PDZ domain GO:0005515 CH53_2727 861d5b8c7f9e5fcebf84b7c88e770487 451 SMART SM00228 115 186 0.22 T 18-10-2018 IPR001478 PDZ domain GO:0005515 CH53_2727 861d5b8c7f9e5fcebf84b7c88e770487 451 Pfam PF02163 Peptidase family M50 10 439 3.9E-88 T 18-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 CH53_2727 861d5b8c7f9e5fcebf84b7c88e770487 451 SUPERFAMILY SSF50156 86 182 6.7E-12 T 18-10-2018 IPR036034 PDZ superfamily GO:0005515 CH53_2727 861d5b8c7f9e5fcebf84b7c88e770487 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 451 4.7E-160 T 18-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CH53_2727 861d5b8c7f9e5fcebf84b7c88e770487 451 SUPERFAMILY SSF50156 194 290 1.29E-16 T 18-10-2018 IPR036034 PDZ superfamily GO:0005515 CH53_2727 861d5b8c7f9e5fcebf84b7c88e770487 451 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 223 274 2.7E-7 T 18-10-2018 IPR001478 PDZ domain GO:0005515 CH53_2727 861d5b8c7f9e5fcebf84b7c88e770487 451 Gene3D G3DSA:2.30.42.10 221 310 9.2E-21 T 18-10-2018 CH53_2141 d9ad556f463d3a39a37285dc487df893 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 1.6E-15 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_2141 d9ad556f463d3a39a37285dc487df893 296 SUPERFAMILY SSF161098 8 296 4.19E-69 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2141 d9ad556f463d3a39a37285dc487df893 296 Gene3D G3DSA:1.10.3720.10 1 283 2.9E-73 T 18-10-2018 IPR035906 MetI-like superfamily CH53_228 b153752a8ed816bcd9de30c203fed1f9 290 Pfam PF03466 LysR substrate binding domain 89 289 1.6E-46 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_228 b153752a8ed816bcd9de30c203fed1f9 290 SUPERFAMILY SSF46785 2 109 2.13E-17 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_228 b153752a8ed816bcd9de30c203fed1f9 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.5E-14 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_228 b153752a8ed816bcd9de30c203fed1f9 290 SUPERFAMILY SSF53850 89 289 1.38E-46 T 18-10-2018 CH53_228 b153752a8ed816bcd9de30c203fed1f9 290 Gene3D G3DSA:3.40.190.290 89 290 7.9E-45 T 18-10-2018 CH53_228 b153752a8ed816bcd9de30c203fed1f9 290 Gene3D G3DSA:1.10.10.10 1 84 3.6E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2143 4b53cc2528c6a1cc7c3edee695211dec 403 SUPERFAMILY SSF53850 36 402 7.25E-93 T 18-10-2018 CH53_2143 4b53cc2528c6a1cc7c3edee695211dec 403 Pfam PF13416 Bacterial extracellular solute-binding protein 57 350 3.1E-41 T 18-10-2018 IPR006059 Bacterial extracellular solute-binding protein CH53_2143 4b53cc2528c6a1cc7c3edee695211dec 403 PRINTS PR00181 Maltose binding protein signature 43 61 1.6E-90 T 18-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 CH53_2143 4b53cc2528c6a1cc7c3edee695211dec 403 PRINTS PR00181 Maltose binding protein signature 158 177 1.6E-90 T 18-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 CH53_2143 4b53cc2528c6a1cc7c3edee695211dec 403 PRINTS PR00181 Maltose binding protein signature 240 259 1.6E-90 T 18-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 CH53_2143 4b53cc2528c6a1cc7c3edee695211dec 403 PRINTS PR00181 Maltose binding protein signature 306 327 1.6E-90 T 18-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 CH53_2143 4b53cc2528c6a1cc7c3edee695211dec 403 PRINTS PR00181 Maltose binding protein signature 77 95 1.6E-90 T 18-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 CH53_2143 4b53cc2528c6a1cc7c3edee695211dec 403 PRINTS PR00181 Maltose binding protein signature 178 197 1.6E-90 T 18-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 CH53_2143 4b53cc2528c6a1cc7c3edee695211dec 403 PRINTS PR00181 Maltose binding protein signature 364 383 1.6E-90 T 18-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 CH53_2143 4b53cc2528c6a1cc7c3edee695211dec 403 PRINTS PR00181 Maltose binding protein signature 137 156 1.6E-90 T 18-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 CH53_2143 4b53cc2528c6a1cc7c3edee695211dec 403 Gene3D G3DSA:3.40.190.10 145 395 1.8E-146 T 18-10-2018 CH53_2143 4b53cc2528c6a1cc7c3edee695211dec 403 Gene3D G3DSA:3.40.190.10 55 364 1.8E-146 T 18-10-2018 CH53_2143 4b53cc2528c6a1cc7c3edee695211dec 403 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 18-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 CH53_1503 bb5bf90cf0029104dd68be73406411aa 73 Pfam PF09526 Probable metal-binding protein (DUF2387) 10 60 2.6E-20 T 18-10-2018 IPR012658 Conserved hypothetical protein CHP02443 CH53_1503 bb5bf90cf0029104dd68be73406411aa 73 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 9 67 1.0E-29 T 18-10-2018 IPR012658 Conserved hypothetical protein CHP02443 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 SMART SM00474 333 520 1.7E-49 T 18-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 Gene3D G3DSA:1.10.150.20 712 855 7.5E-116 T 18-10-2018 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 Pfam PF00476 DNA polymerase family A 555 929 4.8E-155 T 18-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 SMART SM00475 7 268 2.4E-140 T 18-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 SUPERFAMILY SSF47807 171 289 1.94E-31 T 18-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 TIGRFAM TIGR00593 pola: DNA polymerase I 9 932 1.4E-287 T 18-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 SUPERFAMILY SSF56672 525 932 2.0E-157 T 18-10-2018 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 Gene3D G3DSA:3.40.50.1010 9 284 1.6E-97 T 18-10-2018 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 2.4E-55 T 18-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 272 3.9E-31 T 18-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 Gene3D G3DSA:1.10.150.20 174 253 1.6E-97 T 18-10-2018 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 SUPERFAMILY SSF53098 329 521 9.97E-59 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 Gene3D G3DSA:3.30.70.370 667 928 7.5E-116 T 18-10-2018 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 Gene3D G3DSA:1.20.1060.10 546 661 3.8E-40 T 18-10-2018 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 ProSitePatterns PS00447 DNA polymerase family A signature. 757 776 - T 18-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 SMART SM00279 173 208 1.2E-13 T 18-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 Gene3D G3DSA:3.30.420.10 329 545 1.7E-74 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 SMART SM00482 689 896 3.1E-114 T 18-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 Pfam PF01612 3'-5' exonuclease 333 520 1.0E-45 T 18-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 658 680 1.7E-79 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 696 1.7E-79 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 879 892 1.7E-79 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 805 1.7E-79 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 726 1.7E-79 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 757 782 1.7E-79 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 733 746 1.7E-79 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 848 864 1.7E-79 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 816 827 1.7E-79 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1803 3737402d24ea3e8d010479c5c069b5e6 932 SUPERFAMILY SSF88723 7 170 2.09E-57 T 18-10-2018 IPR029060 PIN-like domain superfamily CH53_4410 b8a26749782b1c9ae924d16ffa32351c 281 Gene3D G3DSA:3.30.1600.10 55 191 2.4E-82 T 18-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily CH53_4410 b8a26749782b1c9ae924d16ffa32351c 281 SUPERFAMILY SSF52467 41 267 5.38E-74 T 18-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH53_4410 b8a26749782b1c9ae924d16ffa32351c 281 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 39 269 59.62 T 18-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 CH53_4410 b8a26749782b1c9ae924d16ffa32351c 281 Gene3D G3DSA:3.40.50.1220 41 261 2.4E-82 T 18-10-2018 CH53_4410 b8a26749782b1c9ae924d16ffa32351c 281 Pfam PF02146 Sir2 family 46 219 9.5E-52 T 18-10-2018 IPR003000 Sirtuin family GO:0070403 CH53_52 16a6c790f6c773f4d6552f205e6bb31d 751 Gene3D G3DSA:3.10.350.10 29 87 2.3E-6 T 18-10-2018 IPR036779 LysM domain superfamily CH53_52 16a6c790f6c773f4d6552f205e6bb31d 751 Pfam PF11924 Inverse autotransporter, beta-domain 142 408 1.3E-106 T 18-10-2018 IPR024519 Inverse autotransporter, beta-domain CH53_52 16a6c790f6c773f4d6552f205e6bb31d 751 PRINTS PR01369 Intimin signature 260 275 2.7E-7 T 18-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CH53_52 16a6c790f6c773f4d6552f205e6bb31d 751 PRINTS PR01369 Intimin signature 444 456 2.7E-7 T 18-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CH53_52 16a6c790f6c773f4d6552f205e6bb31d 751 PRINTS PR01369 Intimin signature 288 307 2.7E-7 T 18-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CH53_52 16a6c790f6c773f4d6552f205e6bb31d 751 Pfam PF01476 LysM domain 38 83 2.6E-4 T 18-10-2018 IPR018392 LysM domain CH53_52 16a6c790f6c773f4d6552f205e6bb31d 751 Gene3D G3DSA:2.40.160.160 171 415 2.4E-103 T 18-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily CH53_1051 c34139860ae954bbb554af450d8b8fab 790 Pfam PF00136 DNA polymerase family B 384 742 2.7E-40 T 18-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1051 c34139860ae954bbb554af450d8b8fab 790 Gene3D G3DSA:3.30.70.2250 42 108 1.5E-57 T 18-10-2018 CH53_1051 c34139860ae954bbb554af450d8b8fab 790 Gene3D G3DSA:3.90.1600.30 518 643 1.2E-9 T 18-10-2018 CH53_1051 c34139860ae954bbb554af450d8b8fab 790 Gene3D G3DSA:3.30.420.10 154 353 2.4E-73 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CH53_1051 c34139860ae954bbb554af450d8b8fab 790 SMART SM00486 151 561 4.7E-62 T 18-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1051 c34139860ae954bbb554af450d8b8fab 790 SUPERFAMILY SSF53098 5 395 2.66E-93 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_1051 c34139860ae954bbb554af450d8b8fab 790 Gene3D G3DSA:3.90.1600.10 354 457 7.0E-30 T 18-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1051 c34139860ae954bbb554af450d8b8fab 790 Pfam PF03104 DNA polymerase family B, exonuclease domain 74 302 2.1E-12 T 18-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1051 c34139860ae954bbb554af450d8b8fab 790 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 495 507 7.2E-10 T 18-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1051 c34139860ae954bbb554af450d8b8fab 790 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 421 434 7.2E-10 T 18-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1051 c34139860ae954bbb554af450d8b8fab 790 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 547 555 7.2E-10 T 18-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1051 c34139860ae954bbb554af450d8b8fab 790 Gene3D G3DSA:1.10.287.690 471 517 7.2E-25 T 18-10-2018 CH53_1051 c34139860ae954bbb554af450d8b8fab 790 Gene3D G3DSA:1.10.132.60 646 790 1.7E-60 T 18-10-2018 CH53_1051 c34139860ae954bbb554af450d8b8fab 790 SUPERFAMILY SSF56672 391 784 1.06E-116 T 18-10-2018 CH53_1051 c34139860ae954bbb554af450d8b8fab 790 ProSitePatterns PS00116 DNA polymerase family B signature. 549 557 - T 18-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_1051 c34139860ae954bbb554af450d8b8fab 790 Gene3D G3DSA:2.40.50.590 7 151 1.5E-57 T 18-10-2018 CH53_3847 ac08971c55e8092fa9b3e2e199399f4f 331 SMART SM00846 3 150 8.5E-99 T 18-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_3847 ac08971c55e8092fa9b3e2e199399f4f 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 4.1E-41 T 18-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_3847 ac08971c55e8092fa9b3e2e199399f4f 331 Gene3D G3DSA:3.40.50.720 4 326 2.0E-158 T 18-10-2018 CH53_3847 ac08971c55e8092fa9b3e2e199399f4f 331 SUPERFAMILY SSF55347 149 312 1.7E-80 T 18-10-2018 CH53_3847 ac08971c55e8092fa9b3e2e199399f4f 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 18-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_3847 ac08971c55e8092fa9b3e2e199399f4f 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.3E-70 T 18-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_3847 ac08971c55e8092fa9b3e2e199399f4f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.1E-46 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_3847 ac08971c55e8092fa9b3e2e199399f4f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.1E-46 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_3847 ac08971c55e8092fa9b3e2e199399f4f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.1E-46 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_3847 ac08971c55e8092fa9b3e2e199399f4f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.1E-46 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_3847 ac08971c55e8092fa9b3e2e199399f4f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.1E-46 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_3847 ac08971c55e8092fa9b3e2e199399f4f 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 3.7E-137 T 18-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_3847 ac08971c55e8092fa9b3e2e199399f4f 331 SUPERFAMILY SSF51735 3 166 1.19E-69 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3847 ac08971c55e8092fa9b3e2e199399f4f 331 PIRSF PIRSF000149 1 331 5.8E-135 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_3847 ac08971c55e8092fa9b3e2e199399f4f 331 Gene3D G3DSA:3.30.360.10 149 314 2.0E-158 T 18-10-2018 CH53_1703 b8e50ad1d5388289cbe6717c27c2dd03 482 Pfam PF07690 Major Facilitator Superfamily 27 417 9.4E-29 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_1703 b8e50ad1d5388289cbe6717c27c2dd03 482 Gene3D G3DSA:1.20.1720.10 234 438 5.8E-6 T 18-10-2018 CH53_1703 b8e50ad1d5388289cbe6717c27c2dd03 482 Gene3D G3DSA:1.20.1720.10 20 233 3.1E-26 T 18-10-2018 CH53_1703 b8e50ad1d5388289cbe6717c27c2dd03 482 SUPERFAMILY SSF103473 22 464 3.92E-38 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_1543 0679c128252ae7be595660600515995d 173 Pfam PF01202 Shikimate kinase 13 170 2.0E-56 T 18-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CH53_1543 0679c128252ae7be595660600515995d 173 SUPERFAMILY SSF52540 4 170 5.4E-35 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1543 0679c128252ae7be595660600515995d 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.411 T 18-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CH53_1543 0679c128252ae7be595660600515995d 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 18-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CH53_1543 0679c128252ae7be595660600515995d 173 PRINTS PR01100 Shikimate kinase family signature 59 67 4.3E-29 T 18-10-2018 CH53_1543 0679c128252ae7be595660600515995d 173 PRINTS PR01100 Shikimate kinase family signature 31 44 4.3E-29 T 18-10-2018 CH53_1543 0679c128252ae7be595660600515995d 173 PRINTS PR01100 Shikimate kinase family signature 98 115 4.3E-29 T 18-10-2018 CH53_1543 0679c128252ae7be595660600515995d 173 PRINTS PR01100 Shikimate kinase family signature 7 22 4.3E-29 T 18-10-2018 CH53_1543 0679c128252ae7be595660600515995d 173 PRINTS PR01100 Shikimate kinase family signature 77 86 4.3E-29 T 18-10-2018 CH53_1543 0679c128252ae7be595660600515995d 173 Gene3D G3DSA:3.40.50.300 1 173 2.5E-58 T 18-10-2018 CH53_3787 54241f3e0c6384dea77e0cc632322e18 511 PIRSF PIRSF002869 1 511 1.5E-178 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CH53_3787 54241f3e0c6384dea77e0cc632322e18 511 PRINTS PR01806 Virulence factor MviN signature 33 52 1.6E-86 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CH53_3787 54241f3e0c6384dea77e0cc632322e18 511 PRINTS PR01806 Virulence factor MviN signature 357 376 1.6E-86 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CH53_3787 54241f3e0c6384dea77e0cc632322e18 511 PRINTS PR01806 Virulence factor MviN signature 52 68 1.6E-86 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CH53_3787 54241f3e0c6384dea77e0cc632322e18 511 PRINTS PR01806 Virulence factor MviN signature 133 157 1.6E-86 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CH53_3787 54241f3e0c6384dea77e0cc632322e18 511 PRINTS PR01806 Virulence factor MviN signature 409 426 1.6E-86 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CH53_3787 54241f3e0c6384dea77e0cc632322e18 511 PRINTS PR01806 Virulence factor MviN signature 259 285 1.6E-86 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CH53_3787 54241f3e0c6384dea77e0cc632322e18 511 PRINTS PR01806 Virulence factor MviN signature 157 178 1.6E-86 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CH53_3787 54241f3e0c6384dea77e0cc632322e18 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 505 1.7E-166 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CH53_3787 54241f3e0c6384dea77e0cc632322e18 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.331 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CH53_3787 54241f3e0c6384dea77e0cc632322e18 511 Pfam PF03023 MviN-like protein 28 477 3.6E-153 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CH53_3123 b1935a19dc67c06aa037271b7c5b273f 200 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 32.797 T 18-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CH53_3123 b1935a19dc67c06aa037271b7c5b273f 200 PIRSF PIRSF001296 1 192 1.9E-71 T 18-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CH53_3123 b1935a19dc67c06aa037271b7c5b273f 200 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 187 4.9E-66 T 18-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CH53_3123 b1935a19dc67c06aa037271b7c5b273f 200 Pfam PF02669 K+-transporting ATPase, c chain 5 186 5.5E-66 T 18-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CH53_4049 70ebc69fbd143cdf4be2a9d39267a79d 538 SUPERFAMILY SSF53850 32 531 2.12E-138 T 18-10-2018 CH53_4049 70ebc69fbd143cdf4be2a9d39267a79d 538 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 83 104 - T 18-10-2018 IPR023765 Solute-binding protein family 5, conserved site CH53_4049 70ebc69fbd143cdf4be2a9d39267a79d 538 PIRSF PIRSF002741 3 537 3.7E-108 T 18-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CH53_4049 70ebc69fbd143cdf4be2a9d39267a79d 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 454 4.2E-86 T 18-10-2018 IPR000914 Solute-binding protein family 5 domain CH53_4049 70ebc69fbd143cdf4be2a9d39267a79d 538 Gene3D G3DSA:3.40.190.10 41 519 2.5E-186 T 18-10-2018 CH53_4049 70ebc69fbd143cdf4be2a9d39267a79d 538 Gene3D G3DSA:3.10.105.10 292 507 2.5E-186 T 18-10-2018 CH53_4049 70ebc69fbd143cdf4be2a9d39267a79d 538 Gene3D G3DSA:3.90.76.10 67 190 2.5E-186 T 18-10-2018 CH53_2657 e3b0ba48a1e5cebf4ed61dfc055b58ab 501 SUPERFAMILY SSF52540 109 491 4.18E-97 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2657 e3b0ba48a1e5cebf4ed61dfc055b58ab 501 SMART SM00382 247 365 0.0021 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2657 e3b0ba48a1e5cebf4ed61dfc055b58ab 501 Gene3D G3DSA:3.40.50.300 220 500 2.0E-106 T 18-10-2018 CH53_2657 e3b0ba48a1e5cebf4ed61dfc055b58ab 501 Pfam PF00437 Type II/IV secretion system protein 121 386 4.4E-83 T 18-10-2018 IPR001482 Type II/IV secretion system protein CH53_2657 e3b0ba48a1e5cebf4ed61dfc055b58ab 501 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 314 328 - T 18-10-2018 IPR001482 Type II/IV secretion system protein CH53_2657 e3b0ba48a1e5cebf4ed61dfc055b58ab 501 Gene3D G3DSA:3.30.450.90 86 219 1.3E-48 T 18-10-2018 CH53_2657 e3b0ba48a1e5cebf4ed61dfc055b58ab 501 SUPERFAMILY SSF160246 10 73 2.25E-9 T 18-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily CH53_2657 e3b0ba48a1e5cebf4ed61dfc055b58ab 501 Gene3D G3DSA:3.30.300.160 2 85 4.5E-5 T 18-10-2018 CH53_1792 5ccd4364d11bac1986ed1e8c28bbccf5 330 Gene3D G3DSA:1.10.260.40 1 56 1.2E-22 T 18-10-2018 CH53_1792 5ccd4364d11bac1986ed1e8c28bbccf5 330 SMART SM00354 1 68 4.3E-32 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_1792 5ccd4364d11bac1986ed1e8c28bbccf5 330 Gene3D G3DSA:3.40.50.2300 158 320 1.6E-86 T 18-10-2018 CH53_1792 5ccd4364d11bac1986ed1e8c28bbccf5 330 Pfam PF13377 Periplasmic binding protein-like domain 167 327 8.4E-46 T 18-10-2018 CH53_1792 5ccd4364d11bac1986ed1e8c28bbccf5 330 SUPERFAMILY SSF47413 1 56 4.57E-16 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_1792 5ccd4364d11bac1986ed1e8c28bbccf5 330 SUPERFAMILY SSF53822 57 327 1.62E-90 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_1792 5ccd4364d11bac1986ed1e8c28bbccf5 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 18-10-2018 CH53_1792 5ccd4364d11bac1986ed1e8c28bbccf5 330 Gene3D G3DSA:3.40.50.2300 66 319 1.6E-86 T 18-10-2018 CH53_1792 5ccd4364d11bac1986ed1e8c28bbccf5 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 45 1.6E-19 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_4423 748c3e66e958f6be56d7ab44b0b35a99 117 Gene3D G3DSA:3.30.428.10 1 117 5.0E-36 T 18-10-2018 IPR036265 HIT-like superfamily CH53_4423 748c3e66e958f6be56d7ab44b0b35a99 117 Pfam PF01230 HIT domain 12 109 5.6E-30 T 18-10-2018 IPR001310 Histidine triad (HIT) protein CH53_4423 748c3e66e958f6be56d7ab44b0b35a99 117 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 18-10-2018 IPR019808 Histidine triad, conserved site CH53_4423 748c3e66e958f6be56d7ab44b0b35a99 117 SUPERFAMILY SSF54197 2 111 3.25E-35 T 18-10-2018 IPR036265 HIT-like superfamily CH53_4423 748c3e66e958f6be56d7ab44b0b35a99 117 PRINTS PR00332 Histidine triad family signature 95 105 3.9E-19 T 18-10-2018 IPR001310 Histidine triad (HIT) protein CH53_4423 748c3e66e958f6be56d7ab44b0b35a99 117 PRINTS PR00332 Histidine triad family signature 6 22 3.9E-19 T 18-10-2018 IPR001310 Histidine triad (HIT) protein CH53_4423 748c3e66e958f6be56d7ab44b0b35a99 117 PRINTS PR00332 Histidine triad family signature 27 45 3.9E-19 T 18-10-2018 IPR001310 Histidine triad (HIT) protein CH53_3969 a5cb46fc643644cd316ba5c5941a3e87 415 PRINTS PR00762 Chloride channel signature 155 174 3.7E-23 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CH53_3969 a5cb46fc643644cd316ba5c5941a3e87 415 PRINTS PR00762 Chloride channel signature 105 124 3.7E-23 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CH53_3969 a5cb46fc643644cd316ba5c5941a3e87 415 PRINTS PR00762 Chloride channel signature 319 339 3.7E-23 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CH53_3969 a5cb46fc643644cd316ba5c5941a3e87 415 PRINTS PR00762 Chloride channel signature 354 370 3.7E-23 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CH53_3969 a5cb46fc643644cd316ba5c5941a3e87 415 PRINTS PR00762 Chloride channel signature 372 391 3.7E-23 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CH53_3969 a5cb46fc643644cd316ba5c5941a3e87 415 Pfam PF00654 Voltage gated chloride channel 66 405 4.1E-76 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CH53_3969 a5cb46fc643644cd316ba5c5941a3e87 415 Hamap MF_01203 Voltage-gated ClC-type chloride channel ClcB [clcB]. 4 415 39.197 T 18-10-2018 IPR023790 Chloride channel, voltage-gated, ClcB GO:0006821|GO:0010447 CH53_3969 a5cb46fc643644cd316ba5c5941a3e87 415 Gene3D G3DSA:1.10.3080.10 2 415 3.8E-78 T 18-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 CH53_3969 a5cb46fc643644cd316ba5c5941a3e87 415 SUPERFAMILY SSF81340 2 414 1.7E-85 T 18-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 CH53_992 4a70eb01713141e8dfaa934158f42bda 337 Pfam PF12833 Helix-turn-helix domain 253 331 8.0E-21 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_992 4a70eb01713141e8dfaa934158f42bda 337 Gene3D G3DSA:1.10.10.60 229 333 4.4E-24 T 18-10-2018 CH53_992 4a70eb01713141e8dfaa934158f42bda 337 SUPERFAMILY SSF46689 231 281 8.6E-9 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_992 4a70eb01713141e8dfaa934158f42bda 337 SMART SM00342 247 330 2.3E-23 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_992 4a70eb01713141e8dfaa934158f42bda 337 SUPERFAMILY SSF46689 283 332 4.66E-8 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3919 a6c05eab127e0f8a1dbe70c46edb14c9 108 SUPERFAMILY SSF55159 6 104 6.15E-25 T 18-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 CH53_3919 a6c05eab127e0f8a1dbe70c46edb14c9 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 4.6E-37 T 18-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 CH53_3919 a6c05eab127e0f8a1dbe70c46edb14c9 108 PIRSF PIRSF037511 1 108 7.4E-35 T 18-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 CH53_3919 a6c05eab127e0f8a1dbe70c46edb14c9 108 Pfam PF01253 Translation initiation factor SUI1 32 101 2.4E-18 T 18-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CH53_3919 a6c05eab127e0f8a1dbe70c46edb14c9 108 Gene3D G3DSA:3.30.780.10 28 108 1.4E-32 T 18-10-2018 CH53_2359 77efc87356d21b1861ab8b46f02c4a7e 261 Pfam PF03609 PTS system sorbose-specific iic component 7 238 9.1E-66 T 18-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CH53_655 1e2f974c313e48cfd1da53dfd2551f76 396 SUPERFAMILY SSF52343 255 395 1.3E-35 T 18-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH53_655 1e2f974c313e48cfd1da53dfd2551f76 396 Pfam PF00042 Globin 7 102 5.1E-12 T 18-10-2018 IPR000971 Globin GO:0020037 CH53_655 1e2f974c313e48cfd1da53dfd2551f76 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 371 1.9E-14 T 18-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CH53_655 1e2f974c313e48cfd1da53dfd2551f76 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 56.914 T 18-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 CH53_655 1e2f974c313e48cfd1da53dfd2551f76 396 Pfam PF00970 Oxidoreductase FAD-binding domain 156 252 4.6E-10 T 18-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CH53_655 1e2f974c313e48cfd1da53dfd2551f76 396 Gene3D G3DSA:1.10.490.10 1 142 9.0E-50 T 18-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 CH53_655 1e2f974c313e48cfd1da53dfd2551f76 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 1.1E-5 T 18-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CH53_655 1e2f974c313e48cfd1da53dfd2551f76 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 1.1E-5 T 18-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CH53_655 1e2f974c313e48cfd1da53dfd2551f76 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 1.1E-5 T 18-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CH53_655 1e2f974c313e48cfd1da53dfd2551f76 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 1.1E-5 T 18-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CH53_655 1e2f974c313e48cfd1da53dfd2551f76 396 Gene3D G3DSA:3.40.50.80 256 396 5.6E-31 T 18-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH53_655 1e2f974c313e48cfd1da53dfd2551f76 396 SUPERFAMILY SSF63380 148 253 2.21E-29 T 18-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CH53_655 1e2f974c313e48cfd1da53dfd2551f76 396 Gene3D G3DSA:2.40.30.10 149 254 1.0E-33 T 18-10-2018 CH53_655 1e2f974c313e48cfd1da53dfd2551f76 396 SUPERFAMILY SSF46458 1 142 9.64E-38 T 18-10-2018 IPR009050 Globin-like superfamily CH53_730 2f93009607430062e45b58f60d436487 144 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 18 113 2.2E-40 T 18-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_730 2f93009607430062e45b58f60d436487 144 SUPERFAMILY SSF51278 18 119 5.62E-43 T 18-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_730 2f93009607430062e45b58f60d436487 144 Hamap MF_01954 Urease subunit beta [ureB]. 15 115 29.254 T 18-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_730 2f93009607430062e45b58f60d436487 144 Gene3D G3DSA:2.10.150.10 14 127 6.7E-50 T 18-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_730 2f93009607430062e45b58f60d436487 144 Pfam PF00699 Urease beta subunit 19 113 1.0E-40 T 18-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_861 33fde40c4377b309e55250ed15ac8043 239 Gene3D G3DSA:3.40.50.300 1 235 1.2E-58 T 18-10-2018 CH53_861 33fde40c4377b309e55250ed15ac8043 239 SMART SM00382 30 201 9.7E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_861 33fde40c4377b309e55250ed15ac8043 239 SUPERFAMILY SSF52540 4 230 1.52E-57 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_861 33fde40c4377b309e55250ed15ac8043 239 Pfam PF00005 ABC transporter 21 167 1.4E-31 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_948 cb60d7cd2c06fb1068337e2401dce822 174 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 162 173 - T 18-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CH53_948 cb60d7cd2c06fb1068337e2401dce822 174 Gene3D G3DSA:2.60.40.200 20 174 3.1E-54 T 18-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CH53_948 cb60d7cd2c06fb1068337e2401dce822 174 SUPERFAMILY SSF49329 23 174 4.19E-49 T 18-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CH53_948 cb60d7cd2c06fb1068337e2401dce822 174 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 33 173 5.7E-31 T 18-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CH53_948 cb60d7cd2c06fb1068337e2401dce822 174 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 65 75 - T 18-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CH53_4026 95baeb16aad2ad3fb9c94c345c56879c 508 Gene3D G3DSA:3.40.50.720 3 365 5.2E-164 T 18-10-2018 CH53_4026 95baeb16aad2ad3fb9c94c345c56879c 508 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 18-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 CH53_4026 95baeb16aad2ad3fb9c94c345c56879c 508 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 2.0E-75 T 18-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CH53_4026 95baeb16aad2ad3fb9c94c345c56879c 508 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 508 2.8E-290 T 18-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CH53_4026 95baeb16aad2ad3fb9c94c345c56879c 508 SMART SM01003 4 137 1.3E-77 T 18-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CH53_4026 95baeb16aad2ad3fb9c94c345c56879c 508 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 18-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 CH53_4026 95baeb16aad2ad3fb9c94c345c56879c 508 SUPERFAMILY SSF51735 137 317 2.6E-37 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_4026 95baeb16aad2ad3fb9c94c345c56879c 508 Gene3D G3DSA:3.40.50.720 137 318 5.2E-164 T 18-10-2018 CH53_4026 95baeb16aad2ad3fb9c94c345c56879c 508 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 425 507 5.3E-36 T 18-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CH53_4026 95baeb16aad2ad3fb9c94c345c56879c 508 PIRSF PIRSF000203 1 507 1.9E-277 T 18-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CH53_4026 95baeb16aad2ad3fb9c94c345c56879c 508 SUPERFAMILY SSF52283 1 168 1.62E-58 T 18-10-2018 CH53_4026 95baeb16aad2ad3fb9c94c345c56879c 508 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 9.6E-53 T 18-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CH53_4026 95baeb16aad2ad3fb9c94c345c56879c 508 SMART SM01002 146 311 1.2E-86 T 18-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CH53_1549 14c5527c8f66e836ee6b0d0c3e6b866d 851 Gene3D G3DSA:1.10.3810.10 49 242 7.7E-81 T 18-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_1549 14c5527c8f66e836ee6b0d0c3e6b866d 851 SUPERFAMILY SSF56601 211 833 1.53E-113 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CH53_1549 14c5527c8f66e836ee6b0d0c3e6b866d 851 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 607 1.1E-24 T 18-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CH53_1549 14c5527c8f66e836ee6b0d0c3e6b866d 851 SUPERFAMILY SSF53955 43 257 1.63E-80 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily CH53_1549 14c5527c8f66e836ee6b0d0c3e6b866d 851 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 6.1E-32 T 18-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_1549 14c5527c8f66e836ee6b0d0c3e6b866d 851 Gene3D G3DSA:3.40.710.10 243 372 2.9E-10 T 18-10-2018 CH53_1549 14c5527c8f66e836ee6b0d0c3e6b866d 851 Gene3D G3DSA:3.40.710.10 646 836 1.2E-23 T 18-10-2018 CH53_1549 14c5527c8f66e836ee6b0d0c3e6b866d 851 Gene3D G3DSA:3.40.710.10 399 645 1.1E-67 T 18-10-2018 CH53_1549 14c5527c8f66e836ee6b0d0c3e6b866d 851 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 785 2.0E-172 T 18-10-2018 CH53_1549 14c5527c8f66e836ee6b0d0c3e6b866d 851 Pfam PF00912 Transglycosylase 55 229 2.3E-65 T 18-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_2616 0c85d985e6e2644e7c5d8c269276280f 192 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 15 166 4.7E-11 T 18-10-2018 IPR011978 Uncharacterised protein family UPF0149 CH53_2616 0c85d985e6e2644e7c5d8c269276280f 192 SUPERFAMILY SSF101327 8 176 4.58E-51 T 18-10-2018 IPR036255 YgfB-like superfamily CH53_2616 0c85d985e6e2644e7c5d8c269276280f 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 177 4.9E-36 T 18-10-2018 IPR011978 Uncharacterised protein family UPF0149 CH53_2616 0c85d985e6e2644e7c5d8c269276280f 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 190 36.861 T 18-10-2018 IPR011978 Uncharacterised protein family UPF0149 CH53_2616 0c85d985e6e2644e7c5d8c269276280f 192 Gene3D G3DSA:1.20.120.740 5 192 1.4E-56 T 18-10-2018 CH53_3113 dbeb487264d45b445daf223e6870b8f7 243 SUPERFAMILY SSF63840 186 223 2.48E-5 T 18-10-2018 IPR036725 Colicin E3-like ribonuclease domain superfamily GO:0003723|GO:0009405|GO:0016788|GO:0043022 CH53_3113 dbeb487264d45b445daf223e6870b8f7 243 Pfam PF09000 Cytotoxic 188 224 1.2E-4 T 18-10-2018 IPR009105 Colicin E3-like ribonuclease domain GO:0003723|GO:0009405|GO:0016788|GO:0043022 CH53_971 e48e7ebf611fae039bc107fa1fd6563d 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 6.3E-51 T 18-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CH53_971 e48e7ebf611fae039bc107fa1fd6563d 151 SUPERFAMILY SSF57716 111 149 5.7E-10 T 18-10-2018 CH53_971 e48e7ebf611fae039bc107fa1fd6563d 151 SUPERFAMILY SSF109635 9 110 8.24E-37 T 18-10-2018 IPR037187 DksA, N-terminal domain superfamily CH53_971 e48e7ebf611fae039bc107fa1fd6563d 151 Gene3D G3DSA:1.20.120.910 20 150 1.7E-35 T 18-10-2018 CH53_971 e48e7ebf611fae039bc107fa1fd6563d 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 18-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CH53_971 e48e7ebf611fae039bc107fa1fd6563d 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 18-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CH53_971 e48e7ebf611fae039bc107fa1fd6563d 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 18-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CH53_971 e48e7ebf611fae039bc107fa1fd6563d 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 29.578 T 18-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CH53_971 e48e7ebf611fae039bc107fa1fd6563d 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 111 143 3.1E-10 T 18-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CH53_1336 802ef0a452d7d031e1423d564db9bf61 427 SMART SM00244 97 257 1.6E-41 T 18-10-2018 IPR001107 Band 7 domain CH53_1336 802ef0a452d7d031e1423d564db9bf61 427 Gene3D G3DSA:3.30.479.30 126 259 3.0E-18 T 18-10-2018 CH53_1336 802ef0a452d7d031e1423d564db9bf61 427 TIGRFAM TIGR01933 hflK: HflK protein 99 358 3.4E-120 T 18-10-2018 IPR010201 HflK GO:0016021 CH53_1336 802ef0a452d7d031e1423d564db9bf61 427 Pfam PF01145 SPFH domain / Band 7 family 101 272 7.7E-31 T 18-10-2018 IPR001107 Band 7 domain CH53_1336 802ef0a452d7d031e1423d564db9bf61 427 SUPERFAMILY SSF117892 130 261 6.54E-20 T 18-10-2018 IPR036013 Band 7/SPFH domain superfamily CH53_1336 802ef0a452d7d031e1423d564db9bf61 427 PRINTS PR00721 Stomatin signature 151 172 1.9E-7 T 18-10-2018 IPR001972 Stomatin family GO:0016020 CH53_1336 802ef0a452d7d031e1423d564db9bf61 427 PRINTS PR00721 Stomatin signature 104 126 1.9E-7 T 18-10-2018 IPR001972 Stomatin family GO:0016020 CH53_1336 802ef0a452d7d031e1423d564db9bf61 427 PRINTS PR00721 Stomatin signature 186 203 1.9E-7 T 18-10-2018 IPR001972 Stomatin family GO:0016020 CH53_1336 802ef0a452d7d031e1423d564db9bf61 427 Pfam PF12221 Bacterial membrane protein N terminal 1 60 4.9E-14 T 18-10-2018 IPR020980 Menbrane protein HflK, N-terminal CH53_610 64fe41d7d7664226691e41624e779ea2 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CH53_610 64fe41d7d7664226691e41624e779ea2 259 Pfam PF00106 short chain dehydrogenase 3 197 3.0E-46 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_610 64fe41d7d7664226691e41624e779ea2 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.2E-16 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_610 64fe41d7d7664226691e41624e779ea2 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.2E-16 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_610 64fe41d7d7664226691e41624e779ea2 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.2E-16 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_610 64fe41d7d7664226691e41624e779ea2 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.2E-16 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_610 64fe41d7d7664226691e41624e779ea2 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 5.2E-16 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_610 64fe41d7d7664226691e41624e779ea2 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.8E-6 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_610 64fe41d7d7664226691e41624e779ea2 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.8E-6 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_610 64fe41d7d7664226691e41624e779ea2 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.8E-6 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_610 64fe41d7d7664226691e41624e779ea2 259 SUPERFAMILY SSF51735 3 258 5.8E-63 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_610 64fe41d7d7664226691e41624e779ea2 259 Gene3D G3DSA:3.40.50.720 1 258 7.1E-62 T 18-10-2018 CH53_685 59b6539369ceed56b37051bb057fdc7a 318 Gene3D G3DSA:2.50.20.10 28 209 1.4E-52 T 18-10-2018 CH53_685 59b6539369ceed56b37051bb057fdc7a 318 Pfam PF03888 MucB/RseB N-terminal domain 27 196 2.9E-60 T 18-10-2018 IPR033434 MucB/RseB, N-terminal CH53_685 59b6539369ceed56b37051bb057fdc7a 318 Pfam PF17188 MucB/RseB C-terminal domain 219 312 2.3E-28 T 18-10-2018 IPR033436 MucB/RseB, C-terminal CH53_685 59b6539369ceed56b37051bb057fdc7a 318 PIRSF PIRSF005427 1 318 1.8E-87 T 18-10-2018 IPR005588 MucB/RseB CH53_685 59b6539369ceed56b37051bb057fdc7a 318 Gene3D G3DSA:3.30.200.100 218 318 3.0E-29 T 18-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily CH53_4034 843ef78df5462f5d30f3e36782fb995a 279 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 83 88 - T 18-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 CH53_4034 843ef78df5462f5d30f3e36782fb995a 279 Gene3D G3DSA:2.40.10.10 42 245 4.9E-27 T 18-10-2018 CH53_4034 843ef78df5462f5d30f3e36782fb995a 279 SMART SM00020 47 256 0.0067 T 18-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 CH53_4034 843ef78df5462f5d30f3e36782fb995a 279 PRINTS PR00839 V8 serine protease family signature 72 89 1.3E-16 T 18-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CH53_4034 843ef78df5462f5d30f3e36782fb995a 279 PRINTS PR00839 V8 serine protease family signature 47 64 1.3E-16 T 18-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CH53_4034 843ef78df5462f5d30f3e36782fb995a 279 PRINTS PR00839 V8 serine protease family signature 181 194 1.3E-16 T 18-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CH53_4034 843ef78df5462f5d30f3e36782fb995a 279 PRINTS PR00839 V8 serine protease family signature 215 231 1.3E-16 T 18-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CH53_4034 843ef78df5462f5d30f3e36782fb995a 279 Pfam PF00089 Trypsin 52 246 3.8E-13 T 18-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 CH53_4034 843ef78df5462f5d30f3e36782fb995a 279 SUPERFAMILY SSF50494 34 271 1.96E-29 T 18-10-2018 IPR009003 Peptidase S1, PA clan CH53_4034 843ef78df5462f5d30f3e36782fb995a 279 Gene3D G3DSA:2.40.10.10 57 164 4.9E-27 T 18-10-2018 CH53_4034 843ef78df5462f5d30f3e36782fb995a 279 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 220 231 - T 18-10-2018 IPR033116 Serine proteases, trypsin family, serine active site CH53_3257 328b280bc90c0904eaf5e863f6cb6a20 442 SUPERFAMILY SSF103473 29 438 1.03E-65 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_3257 328b280bc90c0904eaf5e863f6cb6a20 442 ProSitePatterns PS00217 Sugar transport proteins signature 2. 143 168 - T 18-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CH53_3257 328b280bc90c0904eaf5e863f6cb6a20 442 Pfam PF07690 Major Facilitator Superfamily 72 393 1.3E-26 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_3257 328b280bc90c0904eaf5e863f6cb6a20 442 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 40 427 2.7E-137 T 18-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 CH53_3257 328b280bc90c0904eaf5e863f6cb6a20 442 Gene3D G3DSA:1.20.1250.20 29 441 7.0E-65 T 18-10-2018 CH53_2838 9e19da4899a291c33f6124aadac6fcd9 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 18-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CH53_2838 9e19da4899a291c33f6124aadac6fcd9 369 SUPERFAMILY SSF53597 145 363 2.29E-57 T 18-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CH53_2838 9e19da4899a291c33f6124aadac6fcd9 369 SUPERFAMILY SSF53927 4 146 3.51E-47 T 18-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CH53_2838 9e19da4899a291c33f6124aadac6fcd9 369 Pfam PF01872 RibD C-terminal domain 148 361 3.0E-57 T 18-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CH53_2838 9e19da4899a291c33f6124aadac6fcd9 369 PIRSF PIRSF006769 1 368 2.5E-128 T 18-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 CH53_2838 9e19da4899a291c33f6124aadac6fcd9 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 362 4.8E-142 T 18-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 CH53_2838 9e19da4899a291c33f6124aadac6fcd9 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 366 4.0E-72 T 18-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 CH53_2838 9e19da4899a291c33f6124aadac6fcd9 369 Gene3D G3DSA:3.40.430.10 137 368 3.6E-76 T 18-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CH53_2838 9e19da4899a291c33f6124aadac6fcd9 369 Gene3D G3DSA:3.40.140.10 1 136 6.5E-45 T 18-10-2018 CH53_2838 9e19da4899a291c33f6124aadac6fcd9 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 100 1.3E-19 T 18-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CH53_194 1cd8abc9169f4539b7c4c2b28991b527 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 6.7E-16 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CH53_194 1cd8abc9169f4539b7c4c2b28991b527 222 SUPERFAMILY SSF161098 6 201 9.03E-28 T 18-10-2018 IPR035906 MetI-like superfamily CH53_194 1cd8abc9169f4539b7c4c2b28991b527 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 215 9.3E-13 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_194 1cd8abc9169f4539b7c4c2b28991b527 222 Gene3D G3DSA:1.10.3720.10 1 216 6.2E-39 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2219 f853654973315f3772f85f511a87bb31 114 Gene3D G3DSA:1.10.1790.10 6 113 3.0E-35 T 18-10-2018 CH53_2219 f853654973315f3772f85f511a87bb31 114 TIGRFAM TIGR03582 EF_0829: PRD domain protein, EF_0829/AHA_3910 family 16 112 3.9E-39 T 18-10-2018 IPR020044 PRD domain protein, EF0829/AHA3910 CH53_2219 f853654973315f3772f85f511a87bb31 114 SUPERFAMILY SSF63520 21 113 8.37E-9 T 18-10-2018 IPR036634 PRD domain superfamily GO:0006355 CH53_2219 f853654973315f3772f85f511a87bb31 114 Pfam PF00874 PRD domain 38 107 1.3E-4 T 18-10-2018 IPR011608 PRD domain GO:0006355 CH53_1851 36c033e7507a393afb4babed9f56349c 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 9.5E-129 T 18-10-2018 IPR005229 Conserved hypothetical protein CHP00255 CH53_1851 36c033e7507a393afb4babed9f56349c 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.7E-34 T 18-10-2018 IPR013551 Domain of unknown function DUF1732 CH53_1851 36c033e7507a393afb4babed9f56349c 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 4.2E-42 T 18-10-2018 IPR013527 YicC-like, N-terminal CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 335 353 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 PRINTS PR00313 NodO calcium binding signature 384 393 1.1E-11 T 18-10-2018 CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 PRINTS PR00313 NodO calcium binding signature 348 356 1.1E-11 T 18-10-2018 CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 PRINTS PR00313 NodO calcium binding signature 336 347 1.1E-11 T 18-10-2018 CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 PRINTS PR00313 NodO calcium binding signature 357 365 1.1E-11 T 18-10-2018 CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 362 380 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 Pfam PF08548 Peptidase M10 serralysin C terminal 219 484 2.7E-74 T 18-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 Gene3D G3DSA:3.40.390.10 37 170 9.8E-23 T 18-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 303 319 2.1 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 338 355 0.0021 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 320 337 0.0039 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 357 373 0.0037 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 374 391 0.19 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 PIRSF PIRSF001205 345 485 3.3E-31 T 18-10-2018 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 PIRSF PIRSF001205 3 347 4.3E-92 T 18-10-2018 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 353 371 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 SUPERFAMILY SSF55486 22 216 1.37E-33 T 18-10-2018 CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 Gene3D G3DSA:2.150.10.10 196 348 4.4E-58 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 SUPERFAMILY SSF51120 222 346 4.19E-26 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 SUPERFAMILY SSF51120 339 481 2.09E-26 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 Gene3D G3DSA:2.150.10.10 349 485 4.7E-34 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 344 362 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site CH53_1609 8d8b153c6eede68e70b2513c49f9956a 491 SMART SM00235 35 218 5.5E-5 T 18-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 CH53_1768 baf6614d7ef09e59f8f5deb024649acf 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 2.8E-12 T 18-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CH53_1768 baf6614d7ef09e59f8f5deb024649acf 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 88 1.0E-38 T 18-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1768 baf6614d7ef09e59f8f5deb024649acf 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 7 85 1.7E-28 T 18-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1768 baf6614d7ef09e59f8f5deb024649acf 140 Gene3D G3DSA:1.20.5.440 92 135 7.3E-19 T 18-10-2018 CH53_1768 baf6614d7ef09e59f8f5deb024649acf 140 SUPERFAMILY SSF46604 90 138 6.28E-15 T 18-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1768 baf6614d7ef09e59f8f5deb024649acf 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 21.205 T 18-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1768 baf6614d7ef09e59f8f5deb024649acf 140 SUPERFAMILY SSF51344 4 87 6.93E-24 T 18-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1768 baf6614d7ef09e59f8f5deb024649acf 140 Gene3D G3DSA:2.60.15.10 4 91 1.2E-31 T 18-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1768 baf6614d7ef09e59f8f5deb024649acf 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 2.5E-45 T 18-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1425 93ecab1d90c94c471137f3f428f71c90 160 Gene3D G3DSA:1.25.40.10 16 160 2.9E-31 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1425 93ecab1d90c94c471137f3f428f71c90 160 SUPERFAMILY SSF48452 36 149 4.05E-15 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1425 93ecab1d90c94c471137f3f428f71c90 160 Pfam PF14559 Tetratricopeptide repeat 89 148 1.1E-6 T 18-10-2018 CH53_4117 ca61cbf41557d8f52132f6b776c814eb 138 Gene3D G3DSA:3.10.129.10 1 138 9.7E-59 T 18-10-2018 CH53_4117 ca61cbf41557d8f52132f6b776c814eb 138 SUPERFAMILY SSF54637 2 134 9.34E-32 T 18-10-2018 IPR029069 HotDog domain superfamily CH53_4117 ca61cbf41557d8f52132f6b776c814eb 138 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 7.0E-46 T 18-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CH53_4117 ca61cbf41557d8f52132f6b776c814eb 138 Pfam PF03061 Thioesterase superfamily 50 127 1.7E-15 T 18-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CH53_3516 f1f8e31b30495a536ab0f68333487c68 425 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 18-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CH53_3516 f1f8e31b30495a536ab0f68333487c68 425 Gene3D G3DSA:2.160.10.10 301 425 2.7E-38 T 18-10-2018 CH53_3516 f1f8e31b30495a536ab0f68333487c68 425 SUPERFAMILY SSF53448 19 358 3.29E-76 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_3516 f1f8e31b30495a536ab0f68333487c68 425 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 18-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CH53_3516 f1f8e31b30495a536ab0f68333487c68 425 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 18-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CH53_3516 f1f8e31b30495a536ab0f68333487c68 425 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 51.665 T 18-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CH53_3516 f1f8e31b30495a536ab0f68333487c68 425 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 3.1E-154 T 18-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CH53_3516 f1f8e31b30495a536ab0f68333487c68 425 Gene3D G3DSA:3.90.550.10 3 300 2.5E-91 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_3516 f1f8e31b30495a536ab0f68333487c68 425 SUPERFAMILY SSF51161 310 411 3.6E-18 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily CH53_3516 f1f8e31b30495a536ab0f68333487c68 425 Pfam PF00483 Nucleotidyl transferase 22 290 1.1E-67 T 18-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CH53_3003 d528e3df3d54d29905636789de02ca21 109 Gene3D G3DSA:2.40.128.10 3 108 4.8E-33 T 18-10-2018 CH53_3003 d528e3df3d54d29905636789de02ca21 109 Pfam PF02974 Protease inhibitor Inh 8 105 5.7E-20 T 18-10-2018 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 CH53_3003 d528e3df3d54d29905636789de02ca21 109 PRINTS PR01274 Metalloprotease inhibitor signature 3 19 7.4E-13 T 18-10-2018 IPR022815 Protease inhibitor I38 CH53_3003 d528e3df3d54d29905636789de02ca21 109 PRINTS PR01274 Metalloprotease inhibitor signature 46 57 7.4E-13 T 18-10-2018 IPR022815 Protease inhibitor I38 CH53_3003 d528e3df3d54d29905636789de02ca21 109 PRINTS PR01274 Metalloprotease inhibitor signature 85 98 7.4E-13 T 18-10-2018 IPR022815 Protease inhibitor I38 CH53_3003 d528e3df3d54d29905636789de02ca21 109 PRINTS PR01274 Metalloprotease inhibitor signature 68 81 7.4E-13 T 18-10-2018 IPR022815 Protease inhibitor I38 CH53_3003 d528e3df3d54d29905636789de02ca21 109 SUPERFAMILY SSF50882 3 107 4.45E-27 T 18-10-2018 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 CH53_3003 d528e3df3d54d29905636789de02ca21 109 ProDom PD015804 INHIBITOR PROTEASE METALLOPROTEASE PROTEINASE PRECURSOR SIGNAL PERIPLASMIC METALLOENZYME ALKALINE PRTA-SPECIFIC 12 97 5.0E-34 T 18-10-2018 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 CH53_319 40b2d324b5acd6cf873f794a0b81d1a1 865 SUPERFAMILY SSF141729 61 174 2.88E-28 T 18-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 CH53_319 40b2d324b5acd6cf873f794a0b81d1a1 865 Gene3D G3DSA:3.10.20.410 34 160 2.1E-31 T 18-10-2018 CH53_319 40b2d324b5acd6cf873f794a0b81d1a1 865 Gene3D G3DSA:2.60.40.3110 279 368 8.9E-35 T 18-10-2018 CH53_319 40b2d324b5acd6cf873f794a0b81d1a1 865 Gene3D G3DSA:2.60.40.2610 684 773 2.0E-32 T 18-10-2018 CH53_319 40b2d324b5acd6cf873f794a0b81d1a1 865 Pfam PF00577 Outer membrane usher protein 204 768 1.6E-176 T 18-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 CH53_319 40b2d324b5acd6cf873f794a0b81d1a1 865 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 321 331 - T 18-10-2018 IPR018030 Fimbrial membrane usher, conserved site CH53_319 40b2d324b5acd6cf873f794a0b81d1a1 865 Gene3D G3DSA:2.60.40.2070 774 865 1.0E-25 T 18-10-2018 CH53_319 40b2d324b5acd6cf873f794a0b81d1a1 865 Pfam PF13953 PapC C-terminal domain 777 843 3.4E-20 T 18-10-2018 IPR025949 PapC-like, C-terminal domain CH53_319 40b2d324b5acd6cf873f794a0b81d1a1 865 Pfam PF13954 PapC N-terminal domain 36 183 1.7E-42 T 18-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 CH53_453 1ba61794b524e461f33517f35b44d36e 113 Gene3D G3DSA:2.20.25.10 1 43 3.0E-15 T 18-10-2018 CH53_453 1ba61794b524e461f33517f35b44d36e 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 112 4.9E-50 T 18-10-2018 IPR004624 PhnA protein CH53_453 1ba61794b524e461f33517f35b44d36e 113 SUPERFAMILY SSF82057 41 112 2.2E-29 T 18-10-2018 CH53_453 1ba61794b524e461f33517f35b44d36e 113 SUPERFAMILY SSF57783 3 36 3.4E-12 T 18-10-2018 CH53_453 1ba61794b524e461f33517f35b44d36e 113 Gene3D G3DSA:2.30.30.40 44 113 1.2E-35 T 18-10-2018 CH53_453 1ba61794b524e461f33517f35b44d36e 113 Pfam PF08274 PhnA Zinc-Ribbon 4 32 5.2E-11 T 18-10-2018 IPR013987 PhnA protein, N-terminal CH53_453 1ba61794b524e461f33517f35b44d36e 113 Pfam PF03831 PhnA domain 46 112 1.6E-34 T 18-10-2018 IPR013988 PhnA protein, C-terminal CH53_3442 e92de584947a20a195378b82b5ef870d 525 SMART SM00387 418 508 5.1E-6 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3442 e92de584947a20a195378b82b5ef870d 525 Pfam PF05231 MASE1 10 280 7.6E-37 T 18-10-2018 IPR007895 MASE1 CH53_3442 e92de584947a20a195378b82b5ef870d 525 SUPERFAMILY SSF55874 386 505 4.32E-18 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3442 e92de584947a20a195378b82b5ef870d 525 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 505 1.7E-5 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3442 e92de584947a20a195378b82b5ef870d 525 Gene3D G3DSA:3.30.565.10 384 507 1.3E-25 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3442 e92de584947a20a195378b82b5ef870d 525 Pfam PF07730 Histidine kinase 315 379 2.6E-13 T 18-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CH53_1555 9df9cd33f1ef93bbe17b6ac8e60b6efa 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 489 1.2E-210 T 18-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CH53_1555 9df9cd33f1ef93bbe17b6ac8e60b6efa 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 18-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CH53_1555 9df9cd33f1ef93bbe17b6ac8e60b6efa 539 Gene3D G3DSA:2.170.8.10 46 349 4.6E-237 T 18-10-2018 CH53_1555 9df9cd33f1ef93bbe17b6ac8e60b6efa 539 SUPERFAMILY SSF68923 8 226 1.05E-91 T 18-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CH53_1555 9df9cd33f1ef93bbe17b6ac8e60b6efa 539 SUPERFAMILY SSF53795 228 539 2.52E-128 T 18-10-2018 CH53_1555 9df9cd33f1ef93bbe17b6ac8e60b6efa 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 15 537 55.252 T 18-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CH53_1555 9df9cd33f1ef93bbe17b6ac8e60b6efa 539 Gene3D G3DSA:3.90.228.20 234 524 4.6E-237 T 18-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CH53_1555 9df9cd33f1ef93bbe17b6ac8e60b6efa 539 Gene3D G3DSA:3.40.449.10 22 233 4.6E-237 T 18-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CH53_1555 9df9cd33f1ef93bbe17b6ac8e60b6efa 539 PIRSF PIRSF006294 3 539 7.4E-230 T 18-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CH53_1555 9df9cd33f1ef93bbe17b6ac8e60b6efa 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 539 2.6E-286 T 18-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CH53_74 296f977504d3875c19b6ad9e788db47e 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 148 312 1.8E-51 T 18-10-2018 IPR000160 GGDEF domain CH53_74 296f977504d3875c19b6ad9e788db47e 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 311 1.2E-49 T 18-10-2018 IPR000160 GGDEF domain CH53_74 296f977504d3875c19b6ad9e788db47e 319 Pfam PF00072 Response regulator receiver domain 23 133 1.1E-30 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_74 296f977504d3875c19b6ad9e788db47e 319 Gene3D G3DSA:3.40.50.2300 16 140 6.9E-39 T 18-10-2018 CH53_74 296f977504d3875c19b6ad9e788db47e 319 SMART SM00448 21 133 1.2E-38 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_74 296f977504d3875c19b6ad9e788db47e 319 SUPERFAMILY SSF52172 20 171 3.42E-40 T 18-10-2018 IPR011006 CheY-like superfamily CH53_74 296f977504d3875c19b6ad9e788db47e 319 SMART SM00267 139 315 5.0E-65 T 18-10-2018 IPR000160 GGDEF domain CH53_74 296f977504d3875c19b6ad9e788db47e 319 SUPERFAMILY SSF55073 155 313 1.73E-45 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_74 296f977504d3875c19b6ad9e788db47e 319 Gene3D G3DSA:3.30.70.270 141 314 8.3E-54 T 18-10-2018 CH53_2784 a3321ab9a0c9836acd69c6b8f46ee175 193 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.272 T 18-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 CH53_2784 a3321ab9a0c9836acd69c6b8f46ee175 193 Pfam PF13580 SIS domain 14 146 5.0E-31 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_2784 a3321ab9a0c9836acd69c6b8f46ee175 193 Gene3D G3DSA:3.40.50.10490 1 192 9.3E-72 T 18-10-2018 CH53_2784 a3321ab9a0c9836acd69c6b8f46ee175 193 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 2.1E-84 T 18-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 CH53_2784 a3321ab9a0c9836acd69c6b8f46ee175 193 SUPERFAMILY SSF53697 1 189 6.47E-52 T 18-10-2018 CH53_415 2e2c7e79c60aa8af7674c6d62f0dd58c 261 SUPERFAMILY SSF46689 208 256 5.73E-10 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_415 2e2c7e79c60aa8af7674c6d62f0dd58c 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 3.2E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_415 2e2c7e79c60aa8af7674c6d62f0dd58c 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 3.2E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_415 2e2c7e79c60aa8af7674c6d62f0dd58c 261 SUPERFAMILY SSF46689 156 206 8.96E-5 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_415 2e2c7e79c60aa8af7674c6d62f0dd58c 261 Gene3D G3DSA:2.60.120.10 10 94 5.1E-10 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_415 2e2c7e79c60aa8af7674c6d62f0dd58c 261 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 250 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CH53_415 2e2c7e79c60aa8af7674c6d62f0dd58c 261 Pfam PF07883 Cupin domain 27 88 1.0E-7 T 18-10-2018 IPR013096 Cupin 2, conserved barrel CH53_415 2e2c7e79c60aa8af7674c6d62f0dd58c 261 SMART SM00342 172 254 4.4E-23 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_415 2e2c7e79c60aa8af7674c6d62f0dd58c 261 SUPERFAMILY SSF51182 18 88 1.04E-13 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_415 2e2c7e79c60aa8af7674c6d62f0dd58c 261 Pfam PF12833 Helix-turn-helix domain 178 256 9.1E-23 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_415 2e2c7e79c60aa8af7674c6d62f0dd58c 261 Gene3D G3DSA:1.10.10.60 152 258 1.9E-23 T 18-10-2018 CH53_1389 cf694e3a0c31fd7d3f1879c79f2870ac 551 Pfam PF02203 Tar ligand binding domain homologue 4 170 1.3E-14 T 18-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CH53_1389 cf694e3a0c31fd7d3f1879c79f2870ac 551 SMART SM00283 269 516 3.7E-88 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_1389 cf694e3a0c31fd7d3f1879c79f2870ac 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 8.0E-64 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_1389 cf694e3a0c31fd7d3f1879c79f2870ac 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 8.0E-64 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_1389 cf694e3a0c31fd7d3f1879c79f2870ac 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 8.0E-64 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_1389 cf694e3a0c31fd7d3f1879c79f2870ac 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 8.0E-64 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_1389 cf694e3a0c31fd7d3f1879c79f2870ac 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 8.0E-64 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_1389 cf694e3a0c31fd7d3f1879c79f2870ac 551 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 1.1E-52 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_1389 cf694e3a0c31fd7d3f1879c79f2870ac 551 Gene3D G3DSA:1.10.287.950 216 518 7.5E-90 T 18-10-2018 CH53_1389 cf694e3a0c31fd7d3f1879c79f2870ac 551 SUPERFAMILY SSF58104 238 517 5.89E-73 T 18-10-2018 CH53_878 c5a311c1a308449da294f2babba0b092 258 Gene3D G3DSA:3.40.50.300 1 258 4.3E-78 T 18-10-2018 CH53_878 c5a311c1a308449da294f2babba0b092 258 SMART SM00382 30 216 7.6E-15 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_878 c5a311c1a308449da294f2babba0b092 258 Pfam PF00005 ABC transporter 23 167 7.6E-34 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_878 c5a311c1a308449da294f2babba0b092 258 SUPERFAMILY SSF52540 1 230 4.7E-69 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_878 c5a311c1a308449da294f2babba0b092 258 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3736 9ad3d71fdd9f4680798497ed5a6f7e42 447 SUPERFAMILY SSF55909 4 446 1.5E-204 T 18-10-2018 CH53_3736 9ad3d71fdd9f4680798497ed5a6f7e42 447 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 445 8.2E-249 T 18-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CH53_3736 9ad3d71fdd9f4680798497ed5a6f7e42 447 Pfam PF04996 Succinylarginine dihydrolase 4 445 8.7E-219 T 18-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CH53_3736 9ad3d71fdd9f4680798497ed5a6f7e42 447 Gene3D G3DSA:3.75.10.20 1 447 2.1E-209 T 18-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CH53_3736 9ad3d71fdd9f4680798497ed5a6f7e42 447 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 446 59.811 T 18-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CH53_212 81ba557ee71139e26a5fcc697cf17891 223 PIRSF PIRSF001357 2 222 4.5E-73 T 18-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CH53_212 81ba557ee71139e26a5fcc697cf17891 223 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 5 213 8.4E-84 T 18-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CH53_212 81ba557ee71139e26a5fcc697cf17891 223 SUPERFAMILY SSF51569 3 216 2.09E-78 T 18-10-2018 CH53_212 81ba557ee71139e26a5fcc697cf17891 223 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 3 217 34.459 T 18-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 CH53_212 81ba557ee71139e26a5fcc697cf17891 223 Pfam PF01791 DeoC/LacD family aldolase 8 210 8.0E-19 T 18-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CH53_212 81ba557ee71139e26a5fcc697cf17891 223 SMART SM01133 4 215 2.5E-94 T 18-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CH53_212 81ba557ee71139e26a5fcc697cf17891 223 Gene3D G3DSA:3.20.20.70 1 221 7.6E-92 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_4137 7b9054f5ee2852b20e5e93f40e3c2352 184 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 18-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 CH53_4137 7b9054f5ee2852b20e5e93f40e3c2352 184 Gene3D G3DSA:3.40.30.10 1 183 3.7E-62 T 18-10-2018 CH53_4137 7b9054f5ee2852b20e5e93f40e3c2352 184 Pfam PF00255 Glutathione peroxidase 5 111 3.6E-40 T 18-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CH53_4137 7b9054f5ee2852b20e5e93f40e3c2352 184 SUPERFAMILY SSF52833 4 175 2.54E-51 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_4137 7b9054f5ee2852b20e5e93f40e3c2352 184 PRINTS PR01011 Glutathione peroxidase family signature 23 40 2.6E-18 T 18-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CH53_4137 7b9054f5ee2852b20e5e93f40e3c2352 184 PRINTS PR01011 Glutathione peroxidase family signature 58 74 2.6E-18 T 18-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CH53_4137 7b9054f5ee2852b20e5e93f40e3c2352 184 PRINTS PR01011 Glutathione peroxidase family signature 143 152 2.6E-18 T 18-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CH53_4137 7b9054f5ee2852b20e5e93f40e3c2352 184 PIRSF PIRSF000303 1 184 1.6E-62 T 18-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CH53_4137 7b9054f5ee2852b20e5e93f40e3c2352 184 Hamap MF_02061 Thioredoxin/glutathione peroxidase BtuE [btuE]. 3 184 51.421 T 18-10-2018 IPR033674 Thioredoxin/glutathione peroxidase BtuE KEGG: 00480+1.11.1.15+1.11.1.9|KEGG: 00590+1.11.1.9|MetaCyc: PWY-4081 CH53_1702 618d0d1095850153089777345bd9341b 216 Gene3D G3DSA:1.10.10.10 7 94 1.5E-7 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1702 618d0d1095850153089777345bd9341b 216 SUPERFAMILY SSF46785 15 194 7.5E-28 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_4363 f464e55967cc263c117d9f5b521d008c 239 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 39 193 1.0E-43 T 18-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase CH53_4363 f464e55967cc263c117d9f5b521d008c 239 Gene3D G3DSA:3.60.140.10 21 219 2.1E-50 T 18-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily CH53_4363 f464e55967cc263c117d9f5b521d008c 239 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 36 192 4.7E-45 T 18-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase CH53_4363 f464e55967cc263c117d9f5b521d008c 239 SUPERFAMILY SSF64438 31 193 8.79E-48 T 18-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CH53_3923 1d6465fa7ae3c0293685e411b4cec2f6 248 Pfam PF00455 DeoR C terminal sensor domain 70 226 7.3E-42 T 18-10-2018 IPR014036 DeoR C-terminal sensor domain CH53_3923 1d6465fa7ae3c0293685e411b4cec2f6 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 2.5E-8 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_3923 1d6465fa7ae3c0293685e411b4cec2f6 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 2.5E-8 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_3923 1d6465fa7ae3c0293685e411b4cec2f6 248 SUPERFAMILY SSF46785 1 59 2.07E-16 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3923 1d6465fa7ae3c0293685e411b4cec2f6 248 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 1.5E-17 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_3923 1d6465fa7ae3c0293685e411b4cec2f6 248 SUPERFAMILY SSF100950 67 227 8.37E-26 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_3923 1d6465fa7ae3c0293685e411b4cec2f6 248 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 18-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CH53_3923 1d6465fa7ae3c0293685e411b4cec2f6 248 Gene3D G3DSA:1.10.10.10 1 53 4.3E-8 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3923 1d6465fa7ae3c0293685e411b4cec2f6 248 SMART SM01134 67 227 1.1E-50 T 18-10-2018 CH53_3923 1d6465fa7ae3c0293685e411b4cec2f6 248 SMART SM00420 4 56 2.2E-20 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_2790 ade1f0f774fbc11e224f847dc9f12fef 209 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 206 1.4E-104 T 18-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 CH53_2790 ade1f0f774fbc11e224f847dc9f12fef 209 PIRSF PIRSF006102 3 209 1.0E-70 T 18-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CH53_2790 ade1f0f774fbc11e224f847dc9f12fef 209 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.501 T 18-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 CH53_2790 ade1f0f774fbc11e224f847dc9f12fef 209 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 3.5E-62 T 18-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CH53_2145 30faa478dfc0da989e17821b6d214802 428 Pfam PF02264 LamB porin 27 428 1.5E-146 T 18-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 CH53_2145 30faa478dfc0da989e17821b6d214802 428 Gene3D G3DSA:2.40.170.10 25 428 4.5E-172 T 18-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 CH53_2145 30faa478dfc0da989e17821b6d214802 428 SUPERFAMILY SSF56935 25 428 1.71E-149 T 18-10-2018 CH53_2145 30faa478dfc0da989e17821b6d214802 428 Hamap MF_01301 Maltoporin [lamB]. 3 428 43.296 T 18-10-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 CH53_2145 30faa478dfc0da989e17821b6d214802 428 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 31 423 0.0 T 18-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 CH53_352 0b49c2f90f51301edb4590ea678e71c7 479 Gene3D G3DSA:2.40.180.10 2 479 2.6E-232 T 18-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CH53_352 0b49c2f90f51301edb4590ea678e71c7 479 PIRSF PIRSF038928 1 479 2.0E-220 T 18-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CH53_352 0b49c2f90f51301edb4590ea678e71c7 479 SMART SM01060 8 392 1.0E-278 T 18-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CH53_352 0b49c2f90f51301edb4590ea678e71c7 479 Pfam PF00199 Catalase 8 388 2.1E-186 T 18-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CH53_352 0b49c2f90f51301edb4590ea678e71c7 479 SUPERFAMILY SSF56634 4 478 3.14E-209 T 18-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CH53_352 0b49c2f90f51301edb4590ea678e71c7 479 Pfam PF06628 Catalase-related immune-responsive 415 476 1.7E-22 T 18-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CH53_352 0b49c2f90f51301edb4590ea678e71c7 479 PRINTS PR00067 Catalase signature 84 102 6.8E-71 T 18-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CH53_352 0b49c2f90f51301edb4590ea678e71c7 479 PRINTS PR00067 Catalase signature 21 44 6.8E-71 T 18-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CH53_352 0b49c2f90f51301edb4590ea678e71c7 479 PRINTS PR00067 Catalase signature 105 122 6.8E-71 T 18-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CH53_352 0b49c2f90f51301edb4590ea678e71c7 479 PRINTS PR00067 Catalase signature 289 316 6.8E-71 T 18-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CH53_352 0b49c2f90f51301edb4590ea678e71c7 479 PRINTS PR00067 Catalase signature 321 347 6.8E-71 T 18-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CH53_352 0b49c2f90f51301edb4590ea678e71c7 479 PRINTS PR00067 Catalase signature 124 142 6.8E-71 T 18-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CH53_352 0b49c2f90f51301edb4590ea678e71c7 479 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 18-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CH53_713 1ae79cb8059494b047abe9eedb840f59 115 SUPERFAMILY SSF46973 15 113 5.49E-34 T 18-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 CH53_713 1ae79cb8059494b047abe9eedb840f59 115 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 20 112 6.5E-33 T 18-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CH53_713 1ae79cb8059494b047abe9eedb840f59 115 PIRSF PIRSF000699 11 115 2.1E-38 T 18-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CH53_713 1ae79cb8059494b047abe9eedb840f59 115 Gene3D G3DSA:1.20.58.280 14 115 1.8E-36 T 18-10-2018 CH53_1117 dcc71dd439cc48725e4b418a08076bad 440 SUPERFAMILY SSF52418 74 334 1.11E-87 T 18-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_1117 dcc71dd439cc48725e4b418a08076bad 440 SMART SM00941 350 424 2.3E-31 T 18-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_1117 dcc71dd439cc48725e4b418a08076bad 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 6.2E-167 T 18-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_1117 dcc71dd439cc48725e4b418a08076bad 440 Gene3D G3DSA:3.90.1170.30 337 433 2.4E-33 T 18-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_1117 dcc71dd439cc48725e4b418a08076bad 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 2.5E-19 T 18-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_1117 dcc71dd439cc48725e4b418a08076bad 440 SUPERFAMILY SSF54680 337 439 1.07E-33 T 18-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_1117 dcc71dd439cc48725e4b418a08076bad 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 3.9E-25 T 18-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_1117 dcc71dd439cc48725e4b418a08076bad 440 SUPERFAMILY SSF47648 3 70 9.29E-22 T 18-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_1117 dcc71dd439cc48725e4b418a08076bad 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 3.1E-51 T 18-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_1117 dcc71dd439cc48725e4b418a08076bad 440 Gene3D G3DSA:1.20.970.10 7 195 8.6E-131 T 18-10-2018 CH53_1117 dcc71dd439cc48725e4b418a08076bad 440 Gene3D G3DSA:3.40.1030.10 70 322 8.6E-131 T 18-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_1117 dcc71dd439cc48725e4b418a08076bad 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 18-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_1117 dcc71dd439cc48725e4b418a08076bad 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 8.9E-231 T 18-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 CH53_1117 dcc71dd439cc48725e4b418a08076bad 440 PIRSF PIRSF000478 1 439 6.3E-156 T 18-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_1117 dcc71dd439cc48725e4b418a08076bad 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 438 47.528 T 18-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 CH53_4280 c066223f7dac903840f4b1cbf69214cb 306 Pfam PF03466 LysR substrate binding domain 94 293 1.1E-25 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_4280 c066223f7dac903840f4b1cbf69214cb 306 Gene3D G3DSA:3.40.190.10 169 265 6.9E-55 T 18-10-2018 CH53_4280 c066223f7dac903840f4b1cbf69214cb 306 Gene3D G3DSA:3.40.190.10 93 289 6.9E-55 T 18-10-2018 CH53_4280 c066223f7dac903840f4b1cbf69214cb 306 SUPERFAMILY SSF46785 2 82 4.13E-17 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_4280 c066223f7dac903840f4b1cbf69214cb 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.5E-15 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_4280 c066223f7dac903840f4b1cbf69214cb 306 Gene3D G3DSA:1.10.10.10 1 91 1.2E-26 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4280 c066223f7dac903840f4b1cbf69214cb 306 SUPERFAMILY SSF53850 92 293 2.53E-36 T 18-10-2018 CH53_1717 9d629672937aeb649ec595fbc9624f80 200 Pfam PF13309 HTH domain 134 195 4.4E-19 T 18-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain CH53_1717 9d629672937aeb649ec595fbc9624f80 200 Pfam PF08348 YheO-like PAS domain 2 107 8.1E-28 T 18-10-2018 IPR013559 YheO-like CH53_1717 9d629672937aeb649ec595fbc9624f80 200 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 1 113 2.0E-33 T 18-10-2018 IPR013559 YheO-like CH53_3674 553902237d7a9fd3b66d28c20616f3e1 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 195 6.9E-12 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3674 553902237d7a9fd3b66d28c20616f3e1 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 1.7E-5 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3674 553902237d7a9fd3b66d28c20616f3e1 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 1.7E-5 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3674 553902237d7a9fd3b66d28c20616f3e1 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 1.7E-5 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3674 553902237d7a9fd3b66d28c20616f3e1 199 SMART SM00421 141 198 7.8E-7 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3674 553902237d7a9fd3b66d28c20616f3e1 199 SUPERFAMILY SSF46894 125 197 9.18E-14 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_3674 553902237d7a9fd3b66d28c20616f3e1 199 Gene3D G3DSA:1.10.10.10 100 199 5.0E-13 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3571 7ff723a12c384ec31dbacaeca554b32f 454 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 7 452 2.3E-191 T 18-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_3571 7ff723a12c384ec31dbacaeca554b32f 454 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 18-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_3571 7ff723a12c384ec31dbacaeca554b32f 454 SUPERFAMILY SSF52540 108 378 8.29E-92 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3571 7ff723a12c384ec31dbacaeca554b32f 454 SMART SM00382 173 356 6.0E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3571 7ff723a12c384ec31dbacaeca554b32f 454 Gene3D G3DSA:3.40.50.12240 20 454 2.4E-169 T 18-10-2018 CH53_3571 7ff723a12c384ec31dbacaeca554b32f 454 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 450 3.9E-198 T 18-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_3571 7ff723a12c384ec31dbacaeca554b32f 454 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 161 372 8.2E-71 T 18-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_2536 f38404d2fbadd79ecc1b54ab78d70579 563 Pfam PF00691 OmpA family 446 544 3.3E-18 T 18-10-2018 IPR006665 OmpA-like domain CH53_2536 f38404d2fbadd79ecc1b54ab78d70579 563 PRINTS PR01021 OMPA domain signature 479 494 4.1E-7 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CH53_2536 f38404d2fbadd79ecc1b54ab78d70579 563 PRINTS PR01021 OMPA domain signature 494 510 4.1E-7 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CH53_2536 f38404d2fbadd79ecc1b54ab78d70579 563 Gene3D G3DSA:3.30.1330.60 420 557 2.7E-30 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_2536 f38404d2fbadd79ecc1b54ab78d70579 563 SUPERFAMILY SSF103088 443 553 1.44E-28 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_3715 238e012bc948894e07ed239c484de93f 405 Pfam PF00557 Metallopeptidase family M24 185 388 1.0E-35 T 18-10-2018 IPR000994 Peptidase M24 CH53_3715 238e012bc948894e07ed239c484de93f 405 Gene3D G3DSA:3.90.230.10 177 402 4.4E-47 T 18-10-2018 CH53_3715 238e012bc948894e07ed239c484de93f 405 SUPERFAMILY SSF55920 174 401 3.66E-49 T 18-10-2018 IPR036005 Creatinase/aminopeptidase-like CH53_3715 238e012bc948894e07ed239c484de93f 405 Gene3D G3DSA:3.40.350.10 13 176 2.2E-14 T 18-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CH53_3715 238e012bc948894e07ed239c484de93f 405 SUPERFAMILY SSF53092 10 176 4.01E-14 T 18-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CH53_3715 238e012bc948894e07ed239c484de93f 405 Pfam PF01321 Creatinase/Prolidase N-terminal domain 15 177 1.1E-26 T 18-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 CH53_957 8dc996ce679d671704cc277740369482 233 Pfam PF01048 Phosphorylase superfamily 2 226 6.6E-48 T 18-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CH53_957 8dc996ce679d671704cc277740369482 233 SUPERFAMILY SSF53167 1 229 2.88E-73 T 18-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CH53_957 8dc996ce679d671704cc277740369482 233 Gene3D G3DSA:3.40.50.1580 1 232 6.7E-67 T 18-10-2018 CH53_957 8dc996ce679d671704cc277740369482 233 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 46.399 T 18-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CH53_957 8dc996ce679d671704cc277740369482 233 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 1.9E-113 T 18-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CH53_2710 88b42fc085da24633423fc96702922c4 454 Gene3D G3DSA:3.40.50.450 120 452 3.0E-121 T 18-10-2018 CH53_2710 88b42fc085da24633423fc96702922c4 454 SUPERFAMILY SSF102405 119 330 1.05E-41 T 18-10-2018 CH53_2710 88b42fc085da24633423fc96702922c4 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 452 1.5E-56 T 18-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 CH53_2710 88b42fc085da24633423fc96702922c4 454 Pfam PF03641 Possible lysine decarboxylase 190 329 9.3E-33 T 18-10-2018 IPR031100 LOG family CH53_2710 88b42fc085da24633423fc96702922c4 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 1.1E-46 T 18-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 CH53_2710 88b42fc085da24633423fc96702922c4 454 Gene3D G3DSA:3.30.1850.10 1 119 2.3E-52 T 18-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 CH53_674 14efeedce15829c36866d9b8a830003d 280 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 75 4.2E-25 T 18-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CH53_674 14efeedce15829c36866d9b8a830003d 280 SUPERFAMILY SSF46689 1 74 2.87E-19 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_674 14efeedce15829c36866d9b8a830003d 280 Gene3D G3DSA:3.40.50.10490 96 280 4.8E-43 T 18-10-2018 CH53_674 14efeedce15829c36866d9b8a830003d 280 Pfam PF01380 SIS domain 126 255 2.4E-28 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_674 14efeedce15829c36866d9b8a830003d 280 SUPERFAMILY SSF53697 100 276 4.45E-38 T 18-10-2018 CH53_674 14efeedce15829c36866d9b8a830003d 280 Gene3D G3DSA:1.10.10.10 1 80 2.6E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3193 6e919b05c26a330e51fb705ebb2cd72f 326 Pfam PF04055 Radical SAM superfamily 18 178 3.0E-29 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_3193 6e919b05c26a330e51fb705ebb2cd72f 326 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 326 2.5E-105 T 18-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CH53_3193 6e919b05c26a330e51fb705ebb2cd72f 326 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 18-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CH53_3193 6e919b05c26a330e51fb705ebb2cd72f 326 Pfam PF13353 4Fe-4S single cluster domain 22 122 7.8E-6 T 18-10-2018 CH53_3193 6e919b05c26a330e51fb705ebb2cd72f 326 Pfam PF06463 Molybdenum Cofactor Synthesis C 183 309 3.4E-40 T 18-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CH53_3193 6e919b05c26a330e51fb705ebb2cd72f 326 Gene3D G3DSA:3.20.20.70 1 326 4.3E-82 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3193 6e919b05c26a330e51fb705ebb2cd72f 326 SMART SM00729 13 217 9.4E-5 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CH53_3193 6e919b05c26a330e51fb705ebb2cd72f 326 SUPERFAMILY SSF102114 4 279 3.92E-71 T 18-10-2018 CH53_3193 6e919b05c26a330e51fb705ebb2cd72f 326 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 326 38.658 T 18-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CH53_3319 37523c893bf396c1bdbe775fa6141644 345 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 341 53.358 T 18-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 CH53_3319 37523c893bf396c1bdbe775fa6141644 345 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 331 2.5E-136 T 18-10-2018 IPR016040 NAD(P)-binding domain CH53_3319 37523c893bf396c1bdbe775fa6141644 345 Gene3D G3DSA:3.40.50.720 5 322 3.6E-147 T 18-10-2018 CH53_3319 37523c893bf396c1bdbe775fa6141644 345 SUPERFAMILY SSF51735 3 336 3.81E-75 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3319 37523c893bf396c1bdbe775fa6141644 345 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 337 2.2E-145 T 18-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 CH53_3319 37523c893bf396c1bdbe775fa6141644 345 Gene3D G3DSA:3.90.25.10 188 336 3.6E-147 T 18-10-2018 CH53_2787 bad0f601691b45eb99f67b10d9ef86e5 431 Pfam PF11973 NQRA C-terminal domain 246 294 4.5E-22 T 18-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 CH53_2787 bad0f601691b45eb99f67b10d9ef86e5 431 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 2 241 3.2E-104 T 18-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CH53_2787 bad0f601691b45eb99f67b10d9ef86e5 431 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 431 4.0E-176 T 18-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CH53_2787 bad0f601691b45eb99f67b10d9ef86e5 431 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 431 43.578 T 18-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CH53_2987 9a5c1e85bbc48522cf0ee59d2a7dc692 518 SUPERFAMILY SSF51998 28 472 5.19E-89 T 18-10-2018 CH53_2987 9a5c1e85bbc48522cf0ee59d2a7dc692 518 PIRSF PIRSF028991 8 518 8.0E-257 T 18-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted CH53_2987 9a5c1e85bbc48522cf0ee59d2a7dc692 518 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 14 506 4.1E-223 T 18-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted CH53_2987 9a5c1e85bbc48522cf0ee59d2a7dc692 518 Pfam PF11230 Protein of unknown function (DUF3029) 24 506 1.3E-218 T 18-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted CH53_234 3cfb9e01cdfb1c0570070af994e776b8 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 18-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CH53_234 3cfb9e01cdfb1c0570070af994e776b8 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 18-10-2018 IPR002178 PTS EIIA type-2 domain CH53_234 3cfb9e01cdfb1c0570070af994e776b8 377 SUPERFAMILY SSF55594 287 374 2.49E-23 T 18-10-2018 IPR035895 HPr-like superfamily CH53_234 3cfb9e01cdfb1c0570070af994e776b8 377 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 2.1E-22 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_234 3cfb9e01cdfb1c0570070af994e776b8 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 139 2.1E-29 T 18-10-2018 IPR002178 PTS EIIA type-2 domain CH53_234 3cfb9e01cdfb1c0570070af994e776b8 377 SUPERFAMILY SSF55804 2 140 4.97E-38 T 18-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CH53_234 3cfb9e01cdfb1c0570070af994e776b8 377 Gene3D G3DSA:3.40.930.10 1 142 6.2E-40 T 18-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CH53_234 3cfb9e01cdfb1c0570070af994e776b8 377 SUPERFAMILY SSF55804 148 276 6.28E-14 T 18-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CH53_234 3cfb9e01cdfb1c0570070af994e776b8 377 Pfam PF00381 PTS HPr component phosphorylation site 287 368 6.3E-24 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_234 3cfb9e01cdfb1c0570070af994e776b8 377 PRINTS PR00107 Phosphocarrier protein signature 325 340 8.8E-18 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_234 3cfb9e01cdfb1c0570070af994e776b8 377 PRINTS PR00107 Phosphocarrier protein signature 297 313 8.8E-18 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_234 3cfb9e01cdfb1c0570070af994e776b8 377 PRINTS PR00107 Phosphocarrier protein signature 340 357 8.8E-18 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_234 3cfb9e01cdfb1c0570070af994e776b8 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 18-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CH53_234 3cfb9e01cdfb1c0570070af994e776b8 377 Gene3D G3DSA:3.30.1340.10 285 370 1.2E-25 T 18-10-2018 IPR035895 HPr-like superfamily CH53_2627 dcb723cd25ac2ca086afea34328ada48 330 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 323 50.45 T 18-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 CH53_2627 dcb723cd25ac2ca086afea34328ada48 330 Pfam PF01571 Aminomethyltransferase folate-binding domain 32 216 3.9E-8 T 18-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain CH53_2627 dcb723cd25ac2ca086afea34328ada48 330 Gene3D G3DSA:2.40.30.160 198 319 6.4E-43 T 18-10-2018 CH53_2627 dcb723cd25ac2ca086afea34328ada48 330 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 188 253 2.0E-26 T 18-10-2018 IPR017703 YgfZ/GcvT conserved site CH53_2627 dcb723cd25ac2ca086afea34328ada48 330 Gene3D G3DSA:3.30.70.1400 28 114 6.9E-60 T 18-10-2018 CH53_2627 dcb723cd25ac2ca086afea34328ada48 330 Gene3D G3DSA:3.30.70.1630 25 195 6.9E-60 T 18-10-2018 CH53_2627 dcb723cd25ac2ca086afea34328ada48 330 PIRSF PIRSF006487 21 285 2.0E-9 T 18-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CH53_2627 dcb723cd25ac2ca086afea34328ada48 330 SUPERFAMILY SSF103025 19 243 1.3E-64 T 18-10-2018 CH53_2627 dcb723cd25ac2ca086afea34328ada48 330 SUPERFAMILY SSF101790 245 326 1.96E-26 T 18-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CH53_3239 2452445ca81e2fcdfb54cc2b08f4f693 319 SUPERFAMILY SSF47648 7 70 4.58E-14 T 18-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_3239 2452445ca81e2fcdfb54cc2b08f4f693 319 SUPERFAMILY SSF52418 76 317 2.98E-43 T 18-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_3239 2452445ca81e2fcdfb54cc2b08f4f693 319 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 68 8.8E-10 T 18-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_3239 2452445ca81e2fcdfb54cc2b08f4f693 319 Gene3D G3DSA:3.40.1030.10 73 319 1.9E-93 T 18-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_3239 2452445ca81e2fcdfb54cc2b08f4f693 319 Gene3D G3DSA:1.20.970.10 1 72 1.6E-30 T 18-10-2018 CH53_1182 d72a0c74e32b1ce3f53a7c4d50fb39f1 545 Gene3D G3DSA:3.10.20.310 54 136 2.1E-7 T 18-10-2018 CH53_1182 d72a0c74e32b1ce3f53a7c4d50fb39f1 545 Gene3D G3DSA:2.40.160.50 169 545 3.9E-103 T 18-10-2018 CH53_1182 d72a0c74e32b1ce3f53a7c4d50fb39f1 545 PIRSF PIRSF029745 5 545 4.0E-160 T 18-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 CH53_1182 d72a0c74e32b1ce3f53a7c4d50fb39f1 545 Pfam PF17287 POTRA domain 137 191 2.0E-21 T 18-10-2018 IPR035251 ShlB, POTRA domain CH53_1182 d72a0c74e32b1ce3f53a7c4d50fb39f1 545 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 196 509 6.6E-110 T 18-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal CH53_1182 d72a0c74e32b1ce3f53a7c4d50fb39f1 545 Pfam PF08479 POTRA domain, ShlB-type 60 136 1.6E-24 T 18-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type CH53_3185 59fe59e9bd11a634e8679d65f7040835 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 378 3.5E-139 T 18-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CH53_3185 59fe59e9bd11a634e8679d65f7040835 383 Pfam PF00155 Aminotransferase class I and II 41 378 2.3E-61 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_3185 59fe59e9bd11a634e8679d65f7040835 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 18-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 CH53_3185 59fe59e9bd11a634e8679d65f7040835 383 Gene3D G3DSA:3.90.1150.10 41 376 6.5E-132 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_3185 59fe59e9bd11a634e8679d65f7040835 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 382 49.485 T 18-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CH53_3185 59fe59e9bd11a634e8679d65f7040835 383 SUPERFAMILY SSF53383 3 379 2.04E-102 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_3185 59fe59e9bd11a634e8679d65f7040835 383 Gene3D G3DSA:3.40.640.10 57 283 6.5E-132 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_2111 a5c86b00c868a972510ae54db0df2b59 529 Gene3D G3DSA:3.40.50.1380 1 200 1.8E-85 T 18-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CH53_2111 a5c86b00c868a972510ae54db0df2b59 529 Gene3D G3DSA:3.40.140.20 218 374 1.6E-58 T 18-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CH53_2111 a5c86b00c868a972510ae54db0df2b59 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 1.0E-119 T 18-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CH53_2111 a5c86b00c868a972510ae54db0df2b59 529 SUPERFAMILY SSF53927 221 529 4.11E-130 T 18-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CH53_2111 a5c86b00c868a972510ae54db0df2b59 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.708 T 18-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CH53_2111 a5c86b00c868a972510ae54db0df2b59 529 Pfam PF02142 MGS-like domain 19 132 9.5E-29 T 18-10-2018 IPR011607 Methylglyoxal synthase-like domain CH53_2111 a5c86b00c868a972510ae54db0df2b59 529 SMART SM00798 137 461 7.4E-219 T 18-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CH53_2111 a5c86b00c868a972510ae54db0df2b59 529 SUPERFAMILY SSF52335 7 196 6.02E-71 T 18-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CH53_2111 a5c86b00c868a972510ae54db0df2b59 529 PIRSF PIRSF000414 1 529 9.0E-228 T 18-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CH53_2111 a5c86b00c868a972510ae54db0df2b59 529 SMART SM00851 19 132 4.0E-61 T 18-10-2018 IPR011607 Methylglyoxal synthase-like domain CH53_2111 a5c86b00c868a972510ae54db0df2b59 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 1.9E-262 T 18-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CH53_2111 a5c86b00c868a972510ae54db0df2b59 529 Gene3D G3DSA:3.40.140.20 392 529 4.8E-58 T 18-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CH53_1147 44a357abb106833ad50191c5bd9895e1 451 Pfam PF00534 Glycosyl transferases group 1 263 411 2.7E-11 T 18-10-2018 IPR001296 Glycosyl transferase, family 1 CH53_1147 44a357abb106833ad50191c5bd9895e1 451 Gene3D G3DSA:3.40.50.2000 120 435 3.3E-21 T 18-10-2018 CH53_1147 44a357abb106833ad50191c5bd9895e1 451 Gene3D G3DSA:3.40.50.2000 240 430 3.3E-21 T 18-10-2018 CH53_1147 44a357abb106833ad50191c5bd9895e1 451 SUPERFAMILY SSF53756 19 435 8.79E-30 T 18-10-2018 CH53_1750 0fc8f1d90d0f3f50bfd17bb39ab92ba6 284 SUPERFAMILY SSF53850 12 262 6.18E-67 T 18-10-2018 CH53_1750 0fc8f1d90d0f3f50bfd17bb39ab92ba6 284 SMART SM00062 40 263 2.2E-66 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_1750 0fc8f1d90d0f3f50bfd17bb39ab92ba6 284 Gene3D G3DSA:3.40.190.10 32 256 8.5E-64 T 18-10-2018 CH53_1750 0fc8f1d90d0f3f50bfd17bb39ab92ba6 284 Gene3D G3DSA:3.40.190.10 128 221 8.5E-64 T 18-10-2018 CH53_1750 0fc8f1d90d0f3f50bfd17bb39ab92ba6 284 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 261 3.9E-59 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_1750 0fc8f1d90d0f3f50bfd17bb39ab92ba6 284 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 64 77 - T 18-10-2018 IPR018313 Solute-binding protein family 3, conserved site CH53_3121 b179b1c93a23077b2810998fad283372 229 SMART SM00862 151 227 4.3E-21 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_3121 b179b1c93a23077b2810998fad283372 229 Gene3D G3DSA:3.40.50.2300 1 124 3.7E-34 T 18-10-2018 CH53_3121 b179b1c93a23077b2810998fad283372 229 SMART SM00448 6 116 1.4E-37 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3121 b179b1c93a23077b2810998fad283372 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 3.3E-21 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_3121 b179b1c93a23077b2810998fad283372 229 Gene3D G3DSA:1.10.10.10 125 228 3.8E-29 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3121 b179b1c93a23077b2810998fad283372 229 Pfam PF00072 Response regulator receiver domain 8 117 7.6E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3121 b179b1c93a23077b2810998fad283372 229 SUPERFAMILY SSF52172 4 177 2.78E-38 T 18-10-2018 IPR011006 CheY-like superfamily CH53_2703 07e3eb6fbc457ee770d2f8ea53d5a6d5 145 Pfam PF02657 Fe-S metabolism associated domain 18 138 7.2E-37 T 18-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like CH53_2703 07e3eb6fbc457ee770d2f8ea53d5a6d5 145 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 2 140 7.2E-76 T 18-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE CH53_2703 07e3eb6fbc457ee770d2f8ea53d5a6d5 145 Gene3D G3DSA:3.90.1010.10 1 143 9.7E-47 T 18-10-2018 CH53_2703 07e3eb6fbc457ee770d2f8ea53d5a6d5 145 SUPERFAMILY SSF82649 3 144 3.66E-43 T 18-10-2018 CH53_2000 49bbc510d7607d6b7b6541e5f7bba101 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 3.8E-75 T 18-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CH53_2000 49bbc510d7607d6b7b6541e5f7bba101 720 Gene3D G3DSA:3.40.50.300 10 274 2.6E-105 T 18-10-2018 CH53_2000 49bbc510d7607d6b7b6541e5f7bba101 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 18-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 CH53_2000 49bbc510d7607d6b7b6541e5f7bba101 720 Gene3D G3DSA:3.40.50.300 281 636 6.3E-138 T 18-10-2018 CH53_2000 49bbc510d7607d6b7b6541e5f7bba101 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 1.1E-75 T 18-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CH53_2000 49bbc510d7607d6b7b6541e5f7bba101 720 Gene3D G3DSA:1.10.10.160 114 187 2.6E-105 T 18-10-2018 IPR013986 DExx box DNA helicase domain superfamily CH53_2000 49bbc510d7607d6b7b6541e5f7bba101 720 Gene3D G3DSA:1.10.486.10 382 538 6.3E-138 T 18-10-2018 CH53_2000 49bbc510d7607d6b7b6541e5f7bba101 720 SUPERFAMILY SSF52540 4 642 1.19E-181 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_607 8f083c6c5800904e03862032de7990d5 182 PIRSF PIRSF038321 2 182 1.7E-87 T 18-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CH53_607 8f083c6c5800904e03862032de7990d5 182 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 180 5.7E-108 T 18-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CH53_607 8f083c6c5800904e03862032de7990d5 182 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 5 170 7.5E-76 T 18-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CH53_2108 b9b783c3877506052d1bcf921d9d2480 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 18-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CH53_2108 b9b783c3877506052d1bcf921d9d2480 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.4E-32 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_2108 b9b783c3877506052d1bcf921d9d2480 91 SMART SM00411 1 90 5.0E-43 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_2108 b9b783c3877506052d1bcf921d9d2480 91 Gene3D G3DSA:4.10.520.10 1 90 7.4E-37 T 18-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CH53_2108 b9b783c3877506052d1bcf921d9d2480 91 SUPERFAMILY SSF47729 1 90 1.32E-32 T 18-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CH53_2108 b9b783c3877506052d1bcf921d9d2480 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.6E-19 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_2108 b9b783c3877506052d1bcf921d9d2480 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.6E-19 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_2108 b9b783c3877506052d1bcf921d9d2480 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.6E-19 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_1528 e00ff30b03ead426def6f750d4d91a11 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 18-10-2018 CH53_1528 e00ff30b03ead426def6f750d4d91a11 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.5E-18 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_1528 e00ff30b03ead426def6f750d4d91a11 328 Gene3D G3DSA:3.40.50.2300 160 287 2.8E-62 T 18-10-2018 CH53_1528 e00ff30b03ead426def6f750d4d91a11 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.3E-5 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_1528 e00ff30b03ead426def6f750d4d91a11 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.3E-5 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_1528 e00ff30b03ead426def6f750d4d91a11 328 Gene3D G3DSA:1.10.260.40 1 54 1.4E-22 T 18-10-2018 CH53_1528 e00ff30b03ead426def6f750d4d91a11 328 Pfam PF13377 Periplasmic binding protein-like domain 169 320 6.3E-30 T 18-10-2018 CH53_1528 e00ff30b03ead426def6f750d4d91a11 328 Gene3D G3DSA:3.40.50.2300 55 302 2.8E-62 T 18-10-2018 CH53_1528 e00ff30b03ead426def6f750d4d91a11 328 SMART SM00354 1 71 2.6E-29 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_1528 e00ff30b03ead426def6f750d4d91a11 328 SUPERFAMILY SSF53822 61 324 6.0E-67 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_1528 e00ff30b03ead426def6f750d4d91a11 328 SUPERFAMILY SSF47413 1 59 1.43E-17 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_388 bcc008b5ea22f60bfa3616a0275fc949 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 3.4E-22 T 18-10-2018 CH53_388 bcc008b5ea22f60bfa3616a0275fc949 218 Gene3D G3DSA:1.10.150.240 18 80 9.6E-53 T 18-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CH53_388 bcc008b5ea22f60bfa3616a0275fc949 218 SUPERFAMILY SSF56784 4 203 8.54E-45 T 18-10-2018 IPR036412 HAD-like superfamily CH53_388 bcc008b5ea22f60bfa3616a0275fc949 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 49 181 1.1E-15 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_388 bcc008b5ea22f60bfa3616a0275fc949 218 Gene3D G3DSA:3.40.50.1000 4 203 9.6E-53 T 18-10-2018 IPR023214 HAD superfamily CH53_363 bcb3a88cc52b73143e1e6141f0c6196a 317 SUPERFAMILY SSF52283 5 137 5.95E-29 T 18-10-2018 CH53_363 bcb3a88cc52b73143e1e6141f0c6196a 317 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 314 2.5E-23 T 18-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CH53_363 bcb3a88cc52b73143e1e6141f0c6196a 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 283 1.2E-49 T 18-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CH53_363 bcb3a88cc52b73143e1e6141f0c6196a 317 Gene3D G3DSA:3.40.50.720 15 309 2.8E-108 T 18-10-2018 CH53_363 bcb3a88cc52b73143e1e6141f0c6196a 317 Gene3D G3DSA:3.40.50.720 103 286 2.8E-108 T 18-10-2018 CH53_363 bcb3a88cc52b73143e1e6141f0c6196a 317 SUPERFAMILY SSF51735 103 284 2.59E-49 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3493 87e19187215f3f786404e8edaa2b054b 114 SUPERFAMILY SSF48403 13 87 1.6E-8 T 18-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CH53_3493 87e19187215f3f786404e8edaa2b054b 114 Gene3D G3DSA:1.25.40.20 7 112 4.5E-6 T 18-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CH53_1330 7ad1ba8f5057db049de08dd89c41f3e2 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 9.8E-90 T 18-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 CH53_1330 7ad1ba8f5057db049de08dd89c41f3e2 246 Gene3D G3DSA:3.40.1280.10 77 243 1.4E-65 T 18-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH53_1330 7ad1ba8f5057db049de08dd89c41f3e2 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 76 7.3E-20 T 18-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CH53_1330 7ad1ba8f5057db049de08dd89c41f3e2 246 SUPERFAMILY SSF75217 69 243 3.79E-49 T 18-10-2018 IPR029028 Alpha/beta knot methyltransferases CH53_1330 7ad1ba8f5057db049de08dd89c41f3e2 246 SMART SM00967 4 80 4.4E-22 T 18-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CH53_1330 7ad1ba8f5057db049de08dd89c41f3e2 246 Gene3D G3DSA:3.30.1330.30 1 75 9.8E-29 T 18-10-2018 IPR029064 50S ribosomal protein L30e-like CH53_1330 7ad1ba8f5057db049de08dd89c41f3e2 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.111 T 18-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CH53_1330 7ad1ba8f5057db049de08dd89c41f3e2 246 SUPERFAMILY SSF55315 2 75 3.65E-20 T 18-10-2018 IPR029064 50S ribosomal protein L30e-like CH53_1330 7ad1ba8f5057db049de08dd89c41f3e2 246 Pfam PF00588 SpoU rRNA Methylase family 96 236 1.1E-39 T 18-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CH53_771 fa5ec3b63c3bb541ef42d9bf3687b6ae 415 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 9 253 5.0E-43 T 18-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CH53_771 fa5ec3b63c3bb541ef42d9bf3687b6ae 415 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 370 6.6E-28 T 18-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CH53_771 fa5ec3b63c3bb541ef42d9bf3687b6ae 415 Gene3D G3DSA:3.40.47.10 267 414 1.2E-44 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_771 fa5ec3b63c3bb541ef42d9bf3687b6ae 415 SMART SM00825 Beta-ketoacyl synthase 11 414 3.4E-12 T 18-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH53_771 fa5ec3b63c3bb541ef42d9bf3687b6ae 415 SUPERFAMILY SSF53901 9 258 1.5E-55 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_771 fa5ec3b63c3bb541ef42d9bf3687b6ae 415 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 162 178 - T 18-10-2018 IPR018201 Beta-ketoacyl synthase, active site CH53_771 fa5ec3b63c3bb541ef42d9bf3687b6ae 415 SUPERFAMILY SSF53901 221 414 4.02E-58 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_771 fa5ec3b63c3bb541ef42d9bf3687b6ae 415 Gene3D G3DSA:3.40.47.10 1 262 3.4E-62 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_2072 580da31461f0d2e60956892a2e117d05 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 58.246 T 18-10-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 CH53_2072 580da31461f0d2e60956892a2e117d05 443 Gene3D G3DSA:3.90.230.10 161 443 4.7E-78 T 18-10-2018 CH53_2072 580da31461f0d2e60956892a2e117d05 443 Gene3D G3DSA:3.40.350.10 1 159 8.4E-63 T 18-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CH53_2072 580da31461f0d2e60956892a2e117d05 443 Pfam PF00557 Metallopeptidase family M24 168 430 2.2E-41 T 18-10-2018 IPR000994 Peptidase M24 CH53_2072 580da31461f0d2e60956892a2e117d05 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 18-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CH53_2072 580da31461f0d2e60956892a2e117d05 443 SUPERFAMILY SSF55920 163 438 5.36E-53 T 18-10-2018 IPR036005 Creatinase/aminopeptidase-like CH53_3760 b5e4f74f1d542aa71419b909e46594c6 315 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.803 T 18-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CH53_3760 b5e4f74f1d542aa71419b909e46594c6 315 Gene3D G3DSA:3.40.50.2020 148 290 7.9E-137 T 18-10-2018 CH53_3760 b5e4f74f1d542aa71419b909e46594c6 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.1E-30 T 18-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CH53_3760 b5e4f74f1d542aa71419b909e46594c6 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.9E-49 T 18-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CH53_3760 b5e4f74f1d542aa71419b909e46594c6 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 4.4E-127 T 18-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CH53_3760 b5e4f74f1d542aa71419b909e46594c6 315 SMART SM01400 4 121 5.7E-76 T 18-10-2018 CH53_3760 b5e4f74f1d542aa71419b909e46594c6 315 SUPERFAMILY SSF53271 69 306 5.0E-67 T 18-10-2018 IPR029057 Phosphoribosyltransferase-like CH53_3760 b5e4f74f1d542aa71419b909e46594c6 315 Gene3D G3DSA:3.40.50.2020 7 302 7.9E-137 T 18-10-2018 CH53_3760 b5e4f74f1d542aa71419b909e46594c6 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 18-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CH53_1165 2c63afa28eb8abc4aa2fe0d1a324a5dc 96 SUPERFAMILY SSF54909 1 91 2.73E-24 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_1165 2c63afa28eb8abc4aa2fe0d1a324a5dc 96 Gene3D G3DSA:3.30.70.100 1 96 2.2E-37 T 18-10-2018 CH53_1165 2c63afa28eb8abc4aa2fe0d1a324a5dc 96 Hamap MF_02051 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [lsrG]. 1 96 36.311 T 18-10-2018 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase GO:0016853 CH53_1165 2c63afa28eb8abc4aa2fe0d1a324a5dc 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 4.7E-17 T 18-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CH53_3218 05fda3b0170f6fab24f60a6a320d1132 422 Gene3D G3DSA:3.40.50.2300 33 375 2.2E-138 T 18-10-2018 CH53_3218 05fda3b0170f6fab24f60a6a320d1132 422 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 3.0E-177 T 18-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like CH53_3218 05fda3b0170f6fab24f60a6a320d1132 422 Pfam PF13433 Periplasmic binding protein domain 31 406 1.3E-170 T 18-10-2018 CH53_3218 05fda3b0170f6fab24f60a6a320d1132 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 290 303 7.2E-6 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CH53_3218 05fda3b0170f6fab24f60a6a320d1132 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 7.2E-6 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CH53_3218 05fda3b0170f6fab24f60a6a320d1132 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 7.2E-6 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CH53_3218 05fda3b0170f6fab24f60a6a320d1132 422 Gene3D G3DSA:3.40.50.2300 146 395 2.2E-138 T 18-10-2018 CH53_3218 05fda3b0170f6fab24f60a6a320d1132 422 SUPERFAMILY SSF53822 30 408 1.44E-90 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_403 524eed86f196fec7d80076e314ad949f 228 SUPERFAMILY SSF161098 8 205 1.06E-39 T 18-10-2018 IPR035906 MetI-like superfamily CH53_403 524eed86f196fec7d80076e314ad949f 228 Gene3D G3DSA:1.10.3720.10 1 223 8.3E-51 T 18-10-2018 IPR035906 MetI-like superfamily CH53_403 524eed86f196fec7d80076e314ad949f 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 220 1.2E-23 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_403 524eed86f196fec7d80076e314ad949f 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 114 4.5E-20 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CH53_2575 06c390a4d6825b759368c79912562a61 358 SUPERFAMILY SSF53955 153 357 1.24E-37 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily CH53_2575 06c390a4d6825b759368c79912562a61 358 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 357 60.385 T 18-10-2018 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 CH53_2575 06c390a4d6825b759368c79912562a61 358 Gene3D G3DSA:1.10.530.10 178 354 7.4E-49 T 18-10-2018 CH53_2575 06c390a4d6825b759368c79912562a61 358 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 212 240 - T 18-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CH53_2575 06c390a4d6825b759368c79912562a61 358 Pfam PF01464 Transglycosylase SLT domain 195 316 1.1E-32 T 18-10-2018 IPR008258 Transglycosylase SLT domain 1 CH53_2575 06c390a4d6825b759368c79912562a61 358 Pfam PF11873 Domain of unknown function (DUF3393) 3 190 1.4E-77 T 18-10-2018 IPR024570 Murein transglycosylase-C, N-terminal CH53_337 c5df6c77629e74d96dfe0b48fbe28ee9 217 Gene3D G3DSA:3.40.50.2300 1 142 2.8E-30 T 18-10-2018 CH53_337 c5df6c77629e74d96dfe0b48fbe28ee9 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.6E-8 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_337 c5df6c77629e74d96dfe0b48fbe28ee9 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.6E-8 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_337 c5df6c77629e74d96dfe0b48fbe28ee9 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.6E-8 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_337 c5df6c77629e74d96dfe0b48fbe28ee9 217 SUPERFAMILY SSF46894 144 206 1.16E-16 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_337 c5df6c77629e74d96dfe0b48fbe28ee9 217 SMART SM00421 148 205 1.0E-15 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_337 c5df6c77629e74d96dfe0b48fbe28ee9 217 SUPERFAMILY SSF52172 3 136 2.13E-22 T 18-10-2018 IPR011006 CheY-like superfamily CH53_337 c5df6c77629e74d96dfe0b48fbe28ee9 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_337 c5df6c77629e74d96dfe0b48fbe28ee9 217 SMART SM00448 4 120 4.9E-15 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_337 c5df6c77629e74d96dfe0b48fbe28ee9 217 Gene3D G3DSA:1.10.10.10 143 207 3.9E-15 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_337 c5df6c77629e74d96dfe0b48fbe28ee9 217 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.686 T 18-10-2018 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 CH53_337 c5df6c77629e74d96dfe0b48fbe28ee9 217 Pfam PF00072 Response regulator receiver domain 6 120 1.1E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_337 c5df6c77629e74d96dfe0b48fbe28ee9 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 2.1E-18 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2722 e761bba4f948bfb80bd0a92b124caa45 248 SUPERFAMILY SSF53633 7 240 2.75E-73 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CH53_2722 e761bba4f948bfb80bd0a92b124caa45 248 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.145 T 18-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CH53_2722 e761bba4f948bfb80bd0a92b124caa45 248 Gene3D G3DSA:3.40.1160.10 3 247 3.9E-76 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CH53_2722 e761bba4f948bfb80bd0a92b124caa45 248 PIRSF PIRSF005650 4 248 3.9E-91 T 18-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 CH53_2722 e761bba4f948bfb80bd0a92b124caa45 248 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 5.4E-104 T 18-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CH53_2722 e761bba4f948bfb80bd0a92b124caa45 248 Pfam PF00696 Amino acid kinase family 11 219 9.0E-28 T 18-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CH53_2541 cbcfda4fcb262ff321da084b1520ec78 341 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 23 321 3.1E-94 T 18-10-2018 IPR010732 Type VI secretion, TssG-like CH53_2541 cbcfda4fcb262ff321da084b1520ec78 341 Pfam PF06996 Type VI secretion, TssG 23 320 4.2E-84 T 18-10-2018 IPR010732 Type VI secretion, TssG-like CH53_1515 03692fd92076cf33c200dca36aa0c154 325 Pfam PF00561 alpha/beta hydrolase fold 60 299 2.4E-20 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_1515 03692fd92076cf33c200dca36aa0c154 325 Gene3D G3DSA:3.40.50.1820 44 325 9.7E-26 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_1515 03692fd92076cf33c200dca36aa0c154 325 PIRSF PIRSF005211 1 325 6.5E-100 T 18-10-2018 IPR012020 AB hydrolase 4 family CH53_1515 03692fd92076cf33c200dca36aa0c154 325 SUPERFAMILY SSF53474 28 300 4.61E-40 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_1515 03692fd92076cf33c200dca36aa0c154 325 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 226 267 - T 18-10-2018 IPR000952 AB hydrolase 4, conserved site CH53_3082 86822450e820b790d6936284f9de51c1 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.9E-28 T 18-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CH53_3082 86822450e820b790d6936284f9de51c1 474 Pfam PF04055 Radical SAM superfamily 151 325 8.0E-27 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_3082 86822450e820b790d6936284f9de51c1 474 Gene3D G3DSA:3.40.50.12160 3 136 3.1E-32 T 18-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily CH53_3082 86822450e820b790d6936284f9de51c1 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 1.1E-155 T 18-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CH53_3082 86822450e820b790d6936284f9de51c1 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 73.821 T 18-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CH53_3082 86822450e820b790d6936284f9de51c1 474 Gene3D G3DSA:3.80.30.20 145 378 5.5E-84 T 18-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CH53_3082 86822450e820b790d6936284f9de51c1 474 SMART SM00729 147 367 1.4E-63 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CH53_3082 86822450e820b790d6936284f9de51c1 474 Pfam PF01938 TRAM domain 378 438 7.6E-18 T 18-10-2018 IPR002792 TRAM domain CH53_3082 86822450e820b790d6936284f9de51c1 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 18-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CH53_3082 86822450e820b790d6936284f9de51c1 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 437 4.1E-206 T 18-10-2018 CH53_3082 86822450e820b790d6936284f9de51c1 474 SUPERFAMILY SSF102114 126 372 1.44E-63 T 18-10-2018 CH53_4150 6934fa3c0ad6f51c6728702ad5e3f8d5 1067 SMART SM00060 718 800 12.0 T 18-10-2018 IPR003961 Fibronectin type III GO:0005515 CH53_4150 6934fa3c0ad6f51c6728702ad5e3f8d5 1067 SMART SM00060 619 700 4.6 T 18-10-2018 IPR003961 Fibronectin type III GO:0005515 CH53_4150 6934fa3c0ad6f51c6728702ad5e3f8d5 1067 SUPERFAMILY SSF49265 640 806 6.97E-7 T 18-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 CH53_4150 6934fa3c0ad6f51c6728702ad5e3f8d5 1067 Pfam PF09327 Domain of unknown function (DUF1983) 903 982 1.8E-24 T 18-10-2018 IPR015406 Domain of unknown function DUF1983 CH53_4150 6934fa3c0ad6f51c6728702ad5e3f8d5 1067 Pfam PF13550 Putative phage tail protein 341 503 5.1E-15 T 18-10-2018 IPR032876 Tip attachment protein J CH53_4150 6934fa3c0ad6f51c6728702ad5e3f8d5 1067 Gene3D G3DSA:2.60.40.10 608 705 8.8E-7 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_923 01246051b7f58b78e11009374c959873 853 SUPERFAMILY SSF52540 569 800 1.41E-61 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_923 01246051b7f58b78e11009374c959873 853 Gene3D G3DSA:3.40.50.300 572 842 1.3E-101 T 18-10-2018 CH53_923 01246051b7f58b78e11009374c959873 853 SUPERFAMILY SSF55271 7 118 3.01E-42 T 18-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CH53_923 01246051b7f58b78e11009374c959873 853 SMART SM00534 609 796 1.9E-123 T 18-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CH53_923 01246051b7f58b78e11009374c959873 853 PIRSF PIRSF037677 5 828 7.1E-151 T 18-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CH53_923 01246051b7f58b78e11009374c959873 853 Pfam PF01624 MutS domain I 13 124 1.9E-40 T 18-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CH53_923 01246051b7f58b78e11009374c959873 853 SMART SM00533 288 593 1.1E-104 T 18-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CH53_923 01246051b7f58b78e11009374c959873 853 Pfam PF05188 MutS domain II 133 258 9.6E-34 T 18-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CH53_923 01246051b7f58b78e11009374c959873 853 Pfam PF00488 MutS domain V 612 799 2.8E-88 T 18-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CH53_923 01246051b7f58b78e11009374c959873 853 SUPERFAMILY SSF53150 119 271 3.53E-42 T 18-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 CH53_923 01246051b7f58b78e11009374c959873 853 SUPERFAMILY SSF48334 272 568 2.09E-89 T 18-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CH53_923 01246051b7f58b78e11009374c959873 853 Gene3D G3DSA:3.40.1170.10 4 126 4.0E-51 T 18-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CH53_923 01246051b7f58b78e11009374c959873 853 Gene3D G3DSA:1.10.1420.10 389 505 8.4E-104 T 18-10-2018 CH53_923 01246051b7f58b78e11009374c959873 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 690 706 - T 18-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CH53_923 01246051b7f58b78e11009374c959873 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 12 850 0.0 T 18-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CH53_923 01246051b7f58b78e11009374c959873 853 Gene3D G3DSA:1.10.1420.10 271 561 8.4E-104 T 18-10-2018 CH53_923 01246051b7f58b78e11009374c959873 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 12 845 25.198 T 18-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CH53_923 01246051b7f58b78e11009374c959873 853 Gene3D G3DSA:3.30.420.110 132 267 2.7E-38 T 18-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 CH53_923 01246051b7f58b78e11009374c959873 853 Pfam PF05190 MutS family domain IV 430 519 2.0E-28 T 18-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 CH53_923 01246051b7f58b78e11009374c959873 853 Pfam PF05192 MutS domain III 274 561 3.4E-37 T 18-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CH53_1558 8d74fe995ca49599e0d24df6a5a0e460 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.2E-22 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_1558 8d74fe995ca49599e0d24df6a5a0e460 239 SUPERFAMILY SSF52172 3 126 1.15E-41 T 18-10-2018 IPR011006 CheY-like superfamily CH53_1558 8d74fe995ca49599e0d24df6a5a0e460 239 SUPERFAMILY SSF46894 132 234 2.07E-26 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_1558 8d74fe995ca49599e0d24df6a5a0e460 239 SMART SM00862 156 232 1.7E-23 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_1558 8d74fe995ca49599e0d24df6a5a0e460 239 Gene3D G3DSA:3.40.50.2300 1 126 3.2E-40 T 18-10-2018 CH53_1558 8d74fe995ca49599e0d24df6a5a0e460 239 SMART SM00448 5 116 1.2E-44 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1558 8d74fe995ca49599e0d24df6a5a0e460 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1558 8d74fe995ca49599e0d24df6a5a0e460 239 Gene3D G3DSA:1.10.10.10 130 239 1.2E-39 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2724 4ffcf4180aba52166214b73984f2baba 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 2.2E-36 T 18-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CH53_2724 4ffcf4180aba52166214b73984f2baba 398 SUPERFAMILY SSF55347 126 274 7.19E-63 T 18-10-2018 CH53_2724 4ffcf4180aba52166214b73984f2baba 398 SUPERFAMILY SSF69055 302 395 1.18E-28 T 18-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CH53_2724 4ffcf4180aba52166214b73984f2baba 398 SUPERFAMILY SSF51735 2 150 1.35E-44 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2724 4ffcf4180aba52166214b73984f2baba 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 3.1E-39 T 18-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CH53_2724 4ffcf4180aba52166214b73984f2baba 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 394 6.0E-176 T 18-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CH53_2724 4ffcf4180aba52166214b73984f2baba 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 45.976 T 18-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CH53_2724 4ffcf4180aba52166214b73984f2baba 398 PIRSF PIRSF006205 1 398 2.8E-154 T 18-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CH53_2724 4ffcf4180aba52166214b73984f2baba 398 Gene3D G3DSA:1.10.1740.10 312 398 4.3E-30 T 18-10-2018 CH53_2724 4ffcf4180aba52166214b73984f2baba 398 Gene3D G3DSA:3.40.50.720 1 150 1.1E-56 T 18-10-2018 CH53_2724 4ffcf4180aba52166214b73984f2baba 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 1.0E-46 T 18-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CH53_1252 11a5b3034c52d1c764a9922bc3b8e8ec 128 Pfam PF13353 4Fe-4S single cluster domain 2 125 5.5E-41 T 18-10-2018 CH53_1252 11a5b3034c52d1c764a9922bc3b8e8ec 128 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 127 7.9E-49 T 18-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CH53_1252 11a5b3034c52d1c764a9922bc3b8e8ec 128 SUPERFAMILY SSF102114 4 88 4.51E-5 T 18-10-2018 CH53_1252 11a5b3034c52d1c764a9922bc3b8e8ec 128 Gene3D G3DSA:3.20.20.70 1 128 1.4E-11 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_1252 11a5b3034c52d1c764a9922bc3b8e8ec 128 PIRSF PIRSF000368 1 128 5.3E-45 T 18-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CH53_1519 a2543e9ad8f7357dbc4037581a775c25 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.8E-15 T 18-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CH53_1519 a2543e9ad8f7357dbc4037581a775c25 210 SUPERFAMILY SSF51206 8 136 1.83E-35 T 18-10-2018 IPR018490 Cyclic nucleotide-binding-like CH53_1519 a2543e9ad8f7357dbc4037581a775c25 210 Gene3D G3DSA:1.10.10.10 139 207 1.3E-35 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1519 a2543e9ad8f7357dbc4037581a775c25 210 SMART SM00419 160 208 4.5E-17 T 18-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CH53_1519 a2543e9ad8f7357dbc4037581a775c25 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 18-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CH53_1519 a2543e9ad8f7357dbc4037581a775c25 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 18-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CH53_1519 a2543e9ad8f7357dbc4037581a775c25 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 18-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site CH53_1519 a2543e9ad8f7357dbc4037581a775c25 210 SMART SM00100 2 122 1.1E-26 T 18-10-2018 IPR000595 Cyclic nucleotide-binding domain CH53_1519 a2543e9ad8f7357dbc4037581a775c25 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 18-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CH53_1519 a2543e9ad8f7357dbc4037581a775c25 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.5E-24 T 18-10-2018 IPR000595 Cyclic nucleotide-binding domain CH53_1519 a2543e9ad8f7357dbc4037581a775c25 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1519 a2543e9ad8f7357dbc4037581a775c25 210 Gene3D G3DSA:2.60.120.10 10 138 8.9E-45 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_1519 a2543e9ad8f7357dbc4037581a775c25 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 18-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site CH53_1396 ce9b55a2b266f4b3dbf0df77b732710c 665 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 161 4.2E-22 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain CH53_1396 ce9b55a2b266f4b3dbf0df77b732710c 665 Gene3D G3DSA:2.40.170.20 167 665 3.1E-121 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH53_1396 ce9b55a2b266f4b3dbf0df77b732710c 665 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 44 665 2.8E-183 T 18-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 CH53_1396 ce9b55a2b266f4b3dbf0df77b732710c 665 SUPERFAMILY SSF56935 44 665 3.97E-96 T 18-10-2018 CH53_1396 ce9b55a2b266f4b3dbf0df77b732710c 665 Gene3D G3DSA:2.170.130.10 43 166 4.1E-41 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CH53_1396 ce9b55a2b266f4b3dbf0df77b732710c 665 Pfam PF00593 TonB dependent receptor 253 663 4.1E-43 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CH53_1396 ce9b55a2b266f4b3dbf0df77b732710c 665 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 44 665 9.7E-143 T 18-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 CH53_1396 ce9b55a2b266f4b3dbf0df77b732710c 665 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 18-10-2018 IPR010916 TonB box, conserved site CH53_2197 12ae2fc87be501f93c63d6e8efa620cf 348 SUPERFAMILY SSF56524 83 344 5.23E-93 T 18-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 CH53_2197 12ae2fc87be501f93c63d6e8efa620cf 348 Pfam PF00174 Oxidoreductase molybdopterin binding domain 122 281 3.1E-28 T 18-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CH53_2197 12ae2fc87be501f93c63d6e8efa620cf 348 Gene3D G3DSA:3.90.420.10 78 348 4.0E-120 T 18-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 CH53_2197 12ae2fc87be501f93c63d6e8efa620cf 348 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 20 348 55.259 T 18-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 CH53_3744 272cf61c2545262b2f9eeb7c3ce8cfed 307 SUPERFAMILY SSF53822 23 303 1.62E-82 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_3744 272cf61c2545262b2f9eeb7c3ce8cfed 307 Gene3D G3DSA:3.40.50.2300 130 299 7.7E-87 T 18-10-2018 CH53_3744 272cf61c2545262b2f9eeb7c3ce8cfed 307 Pfam PF13407 Periplasmic binding protein domain 27 283 8.8E-59 T 18-10-2018 IPR025997 Periplasmic binding protein CH53_3744 272cf61c2545262b2f9eeb7c3ce8cfed 307 Gene3D G3DSA:3.40.50.2300 27 293 7.7E-87 T 18-10-2018 CH53_1934 8ce758dabeb6ad8b87ffd06971ea32ad 287 TIGRFAM TIGR00067 glut_race: glutamate racemase 29 270 2.6E-84 T 18-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CH53_1934 8ce758dabeb6ad8b87ffd06971ea32ad 287 SUPERFAMILY SSF53681 29 129 1.7E-31 T 18-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CH53_1934 8ce758dabeb6ad8b87ffd06971ea32ad 287 Gene3D G3DSA:3.40.50.1860 118 231 6.0E-91 T 18-10-2018 CH53_1934 8ce758dabeb6ad8b87ffd06971ea32ad 287 Pfam PF01177 Asp/Glu/Hydantoin racemase 31 239 1.2E-26 T 18-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CH53_1934 8ce758dabeb6ad8b87ffd06971ea32ad 287 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 204 214 - T 18-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CH53_1934 8ce758dabeb6ad8b87ffd06971ea32ad 287 Gene3D G3DSA:3.40.50.1860 30 265 6.0E-91 T 18-10-2018 CH53_1934 8ce758dabeb6ad8b87ffd06971ea32ad 287 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 93 101 - T 18-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CH53_1934 8ce758dabeb6ad8b87ffd06971ea32ad 287 SUPERFAMILY SSF53681 131 284 4.58E-33 T 18-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CH53_1934 8ce758dabeb6ad8b87ffd06971ea32ad 287 Hamap MF_00258 Glutamate racemase [murI]. 26 278 34.164 T 18-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CH53_3365 745d94707e160861aca873f8c9b5442e 175 Pfam PF02287 Dehydratase small subunit 41 172 2.0E-58 T 18-10-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 CH53_3365 745d94707e160861aca873f8c9b5442e 175 PIRSF PIRSF018505 1 175 1.2E-72 T 18-10-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 CH53_3365 745d94707e160861aca873f8c9b5442e 175 SUPERFAMILY SSF47148 41 175 2.62E-59 T 18-10-2018 IPR036091 Propanediol/glycerol dehydratase, small subunit superfamily KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 CH53_3365 745d94707e160861aca873f8c9b5442e 175 Gene3D G3DSA:1.10.1510.20 83 175 1.1E-39 T 18-10-2018 IPR036091 Propanediol/glycerol dehydratase, small subunit superfamily KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 CH53_3358 9370e61a90d58fe96902bb2124cad3b8 91 SUPERFAMILY SSF159133 1 90 1.26E-25 T 18-10-2018 IPR036677 EutN/Ccml superfamily CH53_3358 9370e61a90d58fe96902bb2124cad3b8 91 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 87 6.0E-25 T 18-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CH53_3358 9370e61a90d58fe96902bb2124cad3b8 91 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 87 9.3E-29 T 18-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CH53_3358 9370e61a90d58fe96902bb2124cad3b8 91 Gene3D G3DSA:2.40.50.220 1 91 8.8E-31 T 18-10-2018 IPR036677 EutN/Ccml superfamily CH53_2452 0ea9dfb22378ce83671eb1aeedb30ae5 250 Gene3D G3DSA:2.60.40.10 165 250 5.2E-23 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2452 0ea9dfb22378ce83671eb1aeedb30ae5 250 SUPERFAMILY SSF49584 166 244 3.01E-17 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_2452 0ea9dfb22378ce83671eb1aeedb30ae5 250 Gene3D G3DSA:2.60.40.10 32 159 1.0E-35 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2452 0ea9dfb22378ce83671eb1aeedb30ae5 250 SUPERFAMILY SSF49354 30 161 8.63E-31 T 18-10-2018 IPR008962 PapD-like superfamily CH53_2452 0ea9dfb22378ce83671eb1aeedb30ae5 250 PRINTS PR00969 Pili chaperone signature 115 132 2.2E-16 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2452 0ea9dfb22378ce83671eb1aeedb30ae5 250 PRINTS PR00969 Pili chaperone signature 179 194 2.2E-16 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2452 0ea9dfb22378ce83671eb1aeedb30ae5 250 PRINTS PR00969 Pili chaperone signature 143 158 2.2E-16 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2452 0ea9dfb22378ce83671eb1aeedb30ae5 250 PRINTS PR00969 Pili chaperone signature 31 40 2.2E-16 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2452 0ea9dfb22378ce83671eb1aeedb30ae5 250 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 185 240 7.2E-11 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_2452 0ea9dfb22378ce83671eb1aeedb30ae5 250 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 114 131 - T 18-10-2018 IPR018046 Pili assembly chaperone, conserved site CH53_2452 0ea9dfb22378ce83671eb1aeedb30ae5 250 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 31 161 1.4E-32 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_1422 679f777d382db577f7ff537863b80d62 235 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 215 231 4.3E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_1422 679f777d382db577f7ff537863b80d62 235 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 200 215 4.3E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_1422 679f777d382db577f7ff537863b80d62 235 Pfam PF12833 Helix-turn-helix domain 154 231 1.5E-22 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_1422 679f777d382db577f7ff537863b80d62 235 SMART SM00342 148 231 1.3E-22 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_1422 679f777d382db577f7ff537863b80d62 235 SUPERFAMILY SSF46689 185 232 4.08E-11 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1422 679f777d382db577f7ff537863b80d62 235 Gene3D G3DSA:1.10.10.60 131 234 1.1E-25 T 18-10-2018 CH53_3340 2a67949dda91d90686518f9e2029520b 476 Gene3D G3DSA:2.30.30.450 213 353 4.2E-59 T 18-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily CH53_3340 2a67949dda91d90686518f9e2029520b 476 Pfam PF00929 Exonuclease 12 191 1.2E-25 T 18-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CH53_3340 2a67949dda91d90686518f9e2029520b 476 SUPERFAMILY SSF53098 8 474 5.09E-135 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_3340 2a67949dda91d90686518f9e2029520b 476 Pfam PF08411 Exonuclease C-terminal 211 472 9.2E-109 T 18-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 CH53_3340 2a67949dda91d90686518f9e2029520b 476 PIRSF PIRSF000977 2 476 1.8E-204 T 18-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 CH53_3340 2a67949dda91d90686518f9e2029520b 476 Gene3D G3DSA:3.30.420.10 1 200 8.4E-71 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CH53_3340 2a67949dda91d90686518f9e2029520b 476 Gene3D G3DSA:1.20.1280.70 359 420 2.6E-27 T 18-10-2018 CH53_3599 a804af79deeb69521602bb564e38720f 494 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 18-10-2018 IPR018212 Sodium/solute symporter, conserved site CH53_3599 a804af79deeb69521602bb564e38720f 494 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 7.8E-121 T 18-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CH53_3599 a804af79deeb69521602bb564e38720f 494 Pfam PF00474 Sodium:solute symporter family 35 437 1.5E-137 T 18-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CH53_3599 a804af79deeb69521602bb564e38720f 494 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 4.2E-226 T 18-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 CH53_3599 a804af79deeb69521602bb564e38720f 494 Gene3D G3DSA:1.20.1730.10 23 493 1.3E-91 T 18-10-2018 IPR038377 Sodium/glucose symporter superfamily CH53_688 abcdd28cb5e45a73d48e412b68ffd32c 533 SUPERFAMILY SSF56425 238 353 2.84E-41 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_688 abcdd28cb5e45a73d48e412b68ffd32c 533 SUPERFAMILY SSF46977 425 525 3.66E-32 T 18-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_688 abcdd28cb5e45a73d48e412b68ffd32c 533 Pfam PF00890 FAD binding domain 10 392 3.7E-100 T 18-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_688 abcdd28cb5e45a73d48e412b68ffd32c 533 SUPERFAMILY SSF51905 6 447 6.22E-73 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_688 abcdd28cb5e45a73d48e412b68ffd32c 533 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 9.5E-15 T 18-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_688 abcdd28cb5e45a73d48e412b68ffd32c 533 PIRSF PIRSF000171 339 531 8.9E-14 T 18-10-2018 CH53_688 abcdd28cb5e45a73d48e412b68ffd32c 533 PIRSF PIRSF000171 1 249 2.7E-23 T 18-10-2018 CH53_688 abcdd28cb5e45a73d48e412b68ffd32c 533 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 9 520 3.6E-223 T 18-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 CH53_688 abcdd28cb5e45a73d48e412b68ffd32c 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.2E-9 T 18-10-2018 CH53_688 abcdd28cb5e45a73d48e412b68ffd32c 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.2E-9 T 18-10-2018 CH53_688 abcdd28cb5e45a73d48e412b68ffd32c 533 Gene3D G3DSA:3.90.700.10 248 358 1.7E-153 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_688 abcdd28cb5e45a73d48e412b68ffd32c 533 Gene3D G3DSA:3.50.50.60 10 404 1.7E-153 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_688 abcdd28cb5e45a73d48e412b68ffd32c 533 Gene3D G3DSA:1.20.58.100 425 533 5.6E-46 T 18-10-2018 CH53_807 5d155af1973fddbc95417d4d5a3228c8 182 Gene3D G3DSA:2.40.30.60 6 100 2.7E-34 T 18-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 CH53_807 5d155af1973fddbc95417d4d5a3228c8 182 SUPERFAMILY SSF50346 106 182 2.35E-19 T 18-10-2018 IPR011033 PRC-barrel-like superfamily CH53_807 5d155af1973fddbc95417d4d5a3228c8 182 SUPERFAMILY SSF50447 13 99 6.71E-24 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CH53_807 5d155af1973fddbc95417d4d5a3228c8 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.339 T 18-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CH53_807 5d155af1973fddbc95417d4d5a3228c8 182 Pfam PF01782 RimM N-terminal domain 16 96 5.6E-26 T 18-10-2018 IPR002676 RimM, N-terminal GO:0006364 CH53_807 5d155af1973fddbc95417d4d5a3228c8 182 Gene3D G3DSA:2.30.30.240 101 182 1.5E-31 T 18-10-2018 CH53_807 5d155af1973fddbc95417d4d5a3228c8 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 3.7E-60 T 18-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CH53_807 5d155af1973fddbc95417d4d5a3228c8 182 Pfam PF05239 PRC-barrel domain 103 177 3.9E-9 T 18-10-2018 IPR027275 PRC-barrel domain CH53_3799 cdf570eab9463ed5db3a2b0eb2764ced 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 7.2E-103 T 18-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_3799 cdf570eab9463ed5db3a2b0eb2764ced 247 Pfam PF01709 Transcriptional regulator 5 236 1.6E-90 T 18-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_3799 cdf570eab9463ed5db3a2b0eb2764ced 247 SUPERFAMILY SSF75625 3 245 2.35E-94 T 18-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_3799 cdf570eab9463ed5db3a2b0eb2764ced 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.635 T 18-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_3799 cdf570eab9463ed5db3a2b0eb2764ced 247 Gene3D G3DSA:1.10.10.200 1 81 4.1E-34 T 18-10-2018 IPR017856 Integrase-like, N-terminal CH53_3799 cdf570eab9463ed5db3a2b0eb2764ced 247 Gene3D G3DSA:3.30.70.980 85 236 8.6E-58 T 18-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_3799 cdf570eab9463ed5db3a2b0eb2764ced 247 Gene3D G3DSA:3.30.70.980 130 205 8.6E-58 T 18-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_4407 25e6100b5ec90bade4cf96c2a852e654 468 SMART SM00388 248 312 0.0049 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_4407 25e6100b5ec90bade4cf96c2a852e654 468 Gene3D G3DSA:3.30.450.140 26 177 4.1E-66 T 18-10-2018 IPR038429 PhoQ Sensor superfamily CH53_4407 25e6100b5ec90bade4cf96c2a852e654 468 Gene3D G3DSA:1.10.287.130 198 305 4.1E-8 T 18-10-2018 CH53_4407 25e6100b5ec90bade4cf96c2a852e654 468 SUPERFAMILY SSF55874 305 459 4.85E-31 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_4407 25e6100b5ec90bade4cf96c2a852e654 468 SMART SM00387 357 463 1.2E-24 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_4407 25e6100b5ec90bade4cf96c2a852e654 468 Pfam PF08918 PhoQ Sensor 1 169 1.8E-82 T 18-10-2018 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 CH53_4407 25e6100b5ec90bade4cf96c2a852e654 468 SUPERFAMILY SSF47384 231 307 2.94E-5 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_4407 25e6100b5ec90bade4cf96c2a852e654 468 Gene3D G3DSA:3.30.565.10 318 466 1.6E-34 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_4407 25e6100b5ec90bade4cf96c2a852e654 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 7.5E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_4407 25e6100b5ec90bade4cf96c2a852e654 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 7.5E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_4407 25e6100b5ec90bade4cf96c2a852e654 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 459 6.7E-14 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_188 c1fbd805d4d856f0a0529271463f7be2 494 Pfam PF13460 NAD(P)H-binding 10 154 2.5E-12 T 18-10-2018 IPR016040 NAD(P)-binding domain CH53_188 c1fbd805d4d856f0a0529271463f7be2 494 SUPERFAMILY SSF51735 1 301 1.02E-45 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_188 c1fbd805d4d856f0a0529271463f7be2 494 Pfam PF11066 Protein of unknown function (DUF2867) 338 469 4.5E-13 T 18-10-2018 IPR021295 Protein of unknown function DUF2867 CH53_188 c1fbd805d4d856f0a0529271463f7be2 494 Gene3D G3DSA:3.40.50.720 5 305 3.8E-33 T 18-10-2018 CH53_205 13726ebf0ab349f233002d5106a3741a 369 SUPERFAMILY SSF53850 28 368 3.3E-104 T 18-10-2018 CH53_205 13726ebf0ab349f233002d5106a3741a 369 Gene3D G3DSA:3.40.190.10 31 337 1.2E-141 T 18-10-2018 CH53_205 13726ebf0ab349f233002d5106a3741a 369 PIRSF PIRSF019574 1 369 1.3E-142 T 18-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CH53_205 13726ebf0ab349f233002d5106a3741a 369 Pfam PF13416 Bacterial extracellular solute-binding protein 46 334 1.2E-33 T 18-10-2018 IPR006059 Bacterial extracellular solute-binding protein CH53_205 13726ebf0ab349f233002d5106a3741a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 313 339 4.0E-74 T 18-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CH53_205 13726ebf0ab349f233002d5106a3741a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 218 237 4.0E-74 T 18-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CH53_205 13726ebf0ab349f233002d5106a3741a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 180 199 4.0E-74 T 18-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CH53_205 13726ebf0ab349f233002d5106a3741a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 157 171 4.0E-74 T 18-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CH53_205 13726ebf0ab349f233002d5106a3741a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 4.0E-74 T 18-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CH53_205 13726ebf0ab349f233002d5106a3741a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 4.0E-74 T 18-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CH53_205 13726ebf0ab349f233002d5106a3741a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 91 4.0E-74 T 18-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CH53_205 13726ebf0ab349f233002d5106a3741a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 126 142 4.0E-74 T 18-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CH53_205 13726ebf0ab349f233002d5106a3741a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 34 50 4.0E-74 T 18-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CH53_205 13726ebf0ab349f233002d5106a3741a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 268 287 4.0E-74 T 18-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CH53_205 13726ebf0ab349f233002d5106a3741a 369 Gene3D G3DSA:3.40.190.10 135 363 1.2E-141 T 18-10-2018 CH53_305 b04f0bcdfbe3d00c5882be977d06bb4d 196 PIRSF PIRSF015617 1 196 1.5E-66 T 18-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 CH53_305 b04f0bcdfbe3d00c5882be977d06bb4d 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 29 196 1.5E-59 T 18-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 CH53_305 b04f0bcdfbe3d00c5882be977d06bb4d 196 SUPERFAMILY SSF52540 7 196 6.27E-74 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_305 b04f0bcdfbe3d00c5882be977d06bb4d 196 Gene3D G3DSA:3.40.50.300 6 196 4.5E-70 T 18-10-2018 CH53_305 b04f0bcdfbe3d00c5882be977d06bb4d 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 26 196 3.8E-72 T 18-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 CH53_14 abbda0acf768c966e41c8e0506309d7c 1160 Gene3D G3DSA:2.40.50.140 32 125 8.9E-34 T 18-10-2018 CH53_14 abbda0acf768c966e41c8e0506309d7c 1160 Hamap MF_00970 Ribonuclease E [rne]. 1 1146 38.654 T 18-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 CH53_14 abbda0acf768c966e41c8e0506309d7c 1160 Pfam PF10150 Ribonuclease E/G family 121 391 7.1E-92 T 18-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CH53_14 abbda0acf768c966e41c8e0506309d7c 1160 SMART SM00316 37 119 8.4E-13 T 18-10-2018 IPR022967 RNA-binding domain, S1 CH53_14 abbda0acf768c966e41c8e0506309d7c 1160 Pfam PF00575 S1 RNA binding domain 36 118 1.4E-16 T 18-10-2018 IPR003029 S1 domain GO:0003676 CH53_14 abbda0acf768c966e41c8e0506309d7c 1160 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1122 1157 9.7E-14 T 18-10-2018 IPR021968 Polyribonucleotide phosphorylase C-terminal CH53_14 abbda0acf768c966e41c8e0506309d7c 1160 SUPERFAMILY SSF50249 40 124 8.19E-21 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_14 abbda0acf768c966e41c8e0506309d7c 1160 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 1.5E-169 T 18-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CH53_14 abbda0acf768c966e41c8e0506309d7c 1160 Gene3D G3DSA:3.40.1260.20 401 510 3.9E-42 T 18-10-2018 CH53_2453 658843f6065ac4a40a59dc2985823abe 865 Gene3D G3DSA:2.60.40.2070 774 865 1.3E-25 T 18-10-2018 CH53_2453 658843f6065ac4a40a59dc2985823abe 865 SUPERFAMILY SSF141729 61 174 2.88E-28 T 18-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 CH53_2453 658843f6065ac4a40a59dc2985823abe 865 Gene3D G3DSA:3.10.20.410 34 160 2.1E-31 T 18-10-2018 CH53_2453 658843f6065ac4a40a59dc2985823abe 865 Gene3D G3DSA:2.60.40.3110 279 368 8.9E-35 T 18-10-2018 CH53_2453 658843f6065ac4a40a59dc2985823abe 865 Gene3D G3DSA:2.60.40.2610 684 773 2.0E-32 T 18-10-2018 CH53_2453 658843f6065ac4a40a59dc2985823abe 865 Pfam PF00577 Outer membrane usher protein 204 768 1.6E-176 T 18-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 CH53_2453 658843f6065ac4a40a59dc2985823abe 865 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 321 331 - T 18-10-2018 IPR018030 Fimbrial membrane usher, conserved site CH53_2453 658843f6065ac4a40a59dc2985823abe 865 Pfam PF13953 PapC C-terminal domain 777 843 3.4E-20 T 18-10-2018 IPR025949 PapC-like, C-terminal domain CH53_2453 658843f6065ac4a40a59dc2985823abe 865 Pfam PF13954 PapC N-terminal domain 36 183 1.7E-42 T 18-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 CH53_830 e556b14e2d29eb8feea0ffb32856bce5 276 SUPERFAMILY SSF52518 3 273 1.15E-73 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_830 e556b14e2d29eb8feea0ffb32856bce5 276 Gene3D G3DSA:3.40.50.970 3 276 6.1E-84 T 18-10-2018 CH53_830 e556b14e2d29eb8feea0ffb32856bce5 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 26 267 9.1E-39 T 18-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CH53_437 913cc7294283ea2571ce8c47db81993a 163 SUPERFAMILY SSF53254 2 143 4.5E-17 T 18-10-2018 IPR029033 Histidine phosphatase superfamily CH53_437 913cc7294283ea2571ce8c47db81993a 163 Gene3D G3DSA:3.40.50.1240 1 161 2.0E-38 T 18-10-2018 IPR029033 Histidine phosphatase superfamily CH53_437 913cc7294283ea2571ce8c47db81993a 163 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 153 3.5E-47 T 18-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 CH53_437 913cc7294283ea2571ce8c47db81993a 163 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 73 2.9E-7 T 18-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CH53_1608 279f616df60d6603f9cc62af278fea85 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 1.3E-85 T 18-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CH53_1608 279f616df60d6603f9cc62af278fea85 447 SUPERFAMILY SSF53223 6 196 1.09E-73 T 18-10-2018 CH53_1608 279f616df60d6603f9cc62af278fea85 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 3.5E-33 T 18-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CH53_1608 279f616df60d6603f9cc62af278fea85 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 3.5E-33 T 18-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CH53_1608 279f616df60d6603f9cc62af278fea85 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 3.5E-33 T 18-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CH53_1608 279f616df60d6603f9cc62af278fea85 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 3.5E-33 T 18-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CH53_1608 279f616df60d6603f9cc62af278fea85 447 Gene3D G3DSA:1.10.285.10 14 374 7.0E-174 T 18-10-2018 CH53_1608 279f616df60d6603f9cc62af278fea85 447 PIRSF PIRSF000185 22 447 7.0E-114 T 18-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CH53_1608 279f616df60d6603f9cc62af278fea85 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 18-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CH53_1608 279f616df60d6603f9cc62af278fea85 447 Gene3D G3DSA:3.40.50.10860 55 190 7.0E-174 T 18-10-2018 CH53_1608 279f616df60d6603f9cc62af278fea85 447 Gene3D G3DSA:1.10.285.10 401 447 3.9E-10 T 18-10-2018 CH53_1608 279f616df60d6603f9cc62af278fea85 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 3.8E-50 T 18-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CH53_1608 279f616df60d6603f9cc62af278fea85 447 SUPERFAMILY SSF51735 202 446 8.35E-74 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1608 279f616df60d6603f9cc62af278fea85 447 Gene3D G3DSA:3.40.50.720 209 373 7.0E-174 T 18-10-2018 CH53_1608 279f616df60d6603f9cc62af278fea85 447 SMART SM00839 204 445 1.9E-90 T 18-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CH53_2173 0bdbc0c45118b209218b60ed7558085e 392 Gene3D G3DSA:1.10.3720.10 70 179 1.6E-15 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2173 0bdbc0c45118b209218b60ed7558085e 392 Gene3D G3DSA:1.10.3720.10 180 388 3.3E-32 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2173 0bdbc0c45118b209218b60ed7558085e 392 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 261 387 1.3E-14 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_2173 0bdbc0c45118b209218b60ed7558085e 392 SUPERFAMILY SSF161098 82 150 2.78E-13 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2173 0bdbc0c45118b209218b60ed7558085e 392 SUPERFAMILY SSF161098 180 374 2.62E-25 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2173 0bdbc0c45118b209218b60ed7558085e 392 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 83 146 3.2E-17 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CH53_837 818c8337437896dac6efd9e9979873c6 286 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 276 8.4E-96 T 18-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 CH53_3142 3a88a4f199ed369a8af5e7a466a7dde0 935 SMART SM00861 593 786 2.0E-61 T 18-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CH53_3142 3a88a4f199ed369a8af5e7a466a7dde0 935 Pfam PF00676 Dehydrogenase E1 component 223 512 2.8E-50 T 18-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 CH53_3142 3a88a4f199ed369a8af5e7a466a7dde0 935 PIRSF PIRSF000157 1 934 0.0 T 18-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CH53_3142 3a88a4f199ed369a8af5e7a466a7dde0 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 18-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CH53_3142 3a88a4f199ed369a8af5e7a466a7dde0 935 SUPERFAMILY SSF52518 577 793 1.09E-50 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_3142 3a88a4f199ed369a8af5e7a466a7dde0 935 Gene3D G3DSA:1.10.287.1150 84 166 5.6E-30 T 18-10-2018 CH53_3142 3a88a4f199ed369a8af5e7a466a7dde0 935 Pfam PF02779 Transketolase, pyrimidine binding domain 592 787 2.4E-65 T 18-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CH53_3142 3a88a4f199ed369a8af5e7a466a7dde0 935 SUPERFAMILY SSF52518 120 543 2.19E-88 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_3142 3a88a4f199ed369a8af5e7a466a7dde0 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 49 1.8E-16 T 18-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CH53_3142 3a88a4f199ed369a8af5e7a466a7dde0 935 Gene3D G3DSA:3.40.50.970 167 533 5.2E-148 T 18-10-2018 CH53_3142 3a88a4f199ed369a8af5e7a466a7dde0 935 Gene3D G3DSA:3.40.50.12470 556 802 2.8E-170 T 18-10-2018 CH53_3142 3a88a4f199ed369a8af5e7a466a7dde0 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 932 3.8E-52 T 18-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CH53_3142 3a88a4f199ed369a8af5e7a466a7dde0 935 Gene3D G3DSA:3.40.50.11610 723 929 2.8E-170 T 18-10-2018 CH53_635 a33d8d48aa5a61eab84932e4deed60f8 778 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 690 771 2.2E-15 T 18-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_635 a33d8d48aa5a61eab84932e4deed60f8 778 Pfam PF00912 Transglycosylase 63 228 1.1E-49 T 18-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_635 a33d8d48aa5a61eab84932e4deed60f8 778 SUPERFAMILY SSF56601 210 644 2.21E-95 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CH53_635 a33d8d48aa5a61eab84932e4deed60f8 778 Gene3D G3DSA:1.10.3810.10 57 252 9.8E-54 T 18-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_635 a33d8d48aa5a61eab84932e4deed60f8 778 SUPERFAMILY SSF53955 41 261 1.07E-63 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily CH53_635 a33d8d48aa5a61eab84932e4deed60f8 778 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 40 778 2.9E-245 T 18-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_635 a33d8d48aa5a61eab84932e4deed60f8 778 Gene3D G3DSA:3.40.710.10 256 597 1.4E-68 T 18-10-2018 CH53_635 a33d8d48aa5a61eab84932e4deed60f8 778 Pfam PF00905 Penicillin binding protein transpeptidase domain 306 521 1.7E-13 T 18-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CH53_3458 acce1bfdd8d2f89d81a0796d8c3a22f3 465 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 6 456 3.6E-99 T 18-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CH53_3458 acce1bfdd8d2f89d81a0796d8c3a22f3 465 SUPERFAMILY SSF103473 11 460 6.02E-76 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_3458 acce1bfdd8d2f89d81a0796d8c3a22f3 465 Pfam PF00083 Sugar (and other) transporter 19 460 2.4E-103 T 18-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CH53_3458 acce1bfdd8d2f89d81a0796d8c3a22f3 465 PRINTS PR00171 Sugar transporter signature 109 128 4.4E-20 T 18-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CH53_3458 acce1bfdd8d2f89d81a0796d8c3a22f3 465 PRINTS PR00171 Sugar transporter signature 385 397 4.4E-20 T 18-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CH53_3458 acce1bfdd8d2f89d81a0796d8c3a22f3 465 PRINTS PR00171 Sugar transporter signature 26 36 4.4E-20 T 18-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CH53_3458 acce1bfdd8d2f89d81a0796d8c3a22f3 465 PRINTS PR00171 Sugar transporter signature 273 283 4.4E-20 T 18-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CH53_3458 acce1bfdd8d2f89d81a0796d8c3a22f3 465 PRINTS PR00171 Sugar transporter signature 362 383 4.4E-20 T 18-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CH53_3458 acce1bfdd8d2f89d81a0796d8c3a22f3 465 Gene3D G3DSA:1.20.1250.20 9 460 6.9E-118 T 18-10-2018 CH53_3458 acce1bfdd8d2f89d81a0796d8c3a22f3 465 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 89 - T 18-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CH53_3737 1f22c36952451af220508833d7378931 330 PIRSF PIRSF017020 1 327 1.1E-116 T 18-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CH53_3737 1f22c36952451af220508833d7378931 330 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 330 140.473 T 18-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CH53_3737 1f22c36952451af220508833d7378931 330 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 320 3.0E-134 T 18-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CH53_3737 1f22c36952451af220508833d7378931 330 Gene3D G3DSA:3.40.630.10 1 327 2.5E-107 T 18-10-2018 CH53_3737 1f22c36952451af220508833d7378931 330 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 43 321 7.8E-61 T 18-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 CH53_3737 1f22c36952451af220508833d7378931 330 SUPERFAMILY SSF53187 1 321 9.92E-87 T 18-10-2018 CH53_2506 b101dfa2bc8eceff905ab90efe40afb6 111 PIRSF PIRSF012296 1 111 2.0E-55 T 18-10-2018 IPR009307 Ethanolamine utilisation EutS GO:0031469 CH53_2506 b101dfa2bc8eceff905ab90efe40afb6 111 Gene3D G3DSA:3.30.70.1710 1 111 6.4E-47 T 18-10-2018 CH53_2506 b101dfa2bc8eceff905ab90efe40afb6 111 SMART SM00877 39 111 7.7E-15 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_2506 b101dfa2bc8eceff905ab90efe40afb6 111 Pfam PF00936 BMC domain 40 107 1.3E-12 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_2506 b101dfa2bc8eceff905ab90efe40afb6 111 SUPERFAMILY SSF143414 39 107 7.19E-13 T 18-10-2018 IPR037233 CcmK-like superfamily CH53_621 5d6273abf9bb6a2ab831b2c237f29426 487 PIRSF PIRSF000130 1 487 5.8E-195 T 18-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CH53_621 5d6273abf9bb6a2ab831b2c237f29426 487 Pfam PF00571 CBS domain 149 202 1.2E-4 T 18-10-2018 IPR000644 CBS domain CH53_621 5d6273abf9bb6a2ab831b2c237f29426 487 Pfam PF00571 CBS domain 95 140 1.1E-7 T 18-10-2018 IPR000644 CBS domain CH53_621 5d6273abf9bb6a2ab831b2c237f29426 487 SUPERFAMILY SSF54631 95 203 1.15E-24 T 18-10-2018 CH53_621 5d6273abf9bb6a2ab831b2c237f29426 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 18-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CH53_621 5d6273abf9bb6a2ab831b2c237f29426 487 SMART SM01240 7 473 0.0 T 18-10-2018 CH53_621 5d6273abf9bb6a2ab831b2c237f29426 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 83.807 T 18-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CH53_621 5d6273abf9bb6a2ab831b2c237f29426 487 SUPERFAMILY SSF51412 2 477 1.01E-123 T 18-10-2018 CH53_621 5d6273abf9bb6a2ab831b2c237f29426 487 SMART SM00116 158 206 4.5E-8 T 18-10-2018 IPR000644 CBS domain CH53_621 5d6273abf9bb6a2ab831b2c237f29426 487 SMART SM00116 96 144 7.2E-9 T 18-10-2018 IPR000644 CBS domain CH53_621 5d6273abf9bb6a2ab831b2c237f29426 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 7.4E-195 T 18-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CH53_621 5d6273abf9bb6a2ab831b2c237f29426 487 Gene3D G3DSA:3.20.20.70 1 486 5.1E-205 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_621 5d6273abf9bb6a2ab831b2c237f29426 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 7.4E-160 T 18-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CH53_2589 d37975308700380af0e19bf332bcc61d 348 SUPERFAMILY SSF55909 1 347 8.74E-136 T 18-10-2018 CH53_2589 d37975308700380af0e19bf332bcc61d 348 Hamap MF_01841 Agmatine deiminase [aguA]. 1 347 56.039 T 18-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 CH53_2589 d37975308700380af0e19bf332bcc61d 348 Gene3D G3DSA:3.75.10.10 1 348 4.9E-134 T 18-10-2018 CH53_2589 d37975308700380af0e19bf332bcc61d 348 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 1 346 4.7E-120 T 18-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 CH53_2589 d37975308700380af0e19bf332bcc61d 348 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 1 346 9.7E-170 T 18-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 CH53_2594 21cbe612491a5be549c8fa844feba272 243 SUPERFAMILY SSF75217 75 242 1.15E-51 T 18-10-2018 IPR029028 Alpha/beta knot methyltransferases CH53_2594 21cbe612491a5be549c8fa844feba272 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 1.4E-87 T 18-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CH53_2594 21cbe612491a5be549c8fa844feba272 243 Pfam PF04452 RNA methyltransferase 20 236 1.8E-73 T 18-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CH53_2594 21cbe612491a5be549c8fa844feba272 243 Gene3D G3DSA:3.40.1280.10 74 243 1.2E-63 T 18-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH53_2594 21cbe612491a5be549c8fa844feba272 243 PIRSF PIRSF015601 2 242 1.2E-53 T 18-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CH53_2594 21cbe612491a5be549c8fa844feba272 243 Gene3D G3DSA:2.40.240.20 1 73 2.5E-21 T 18-10-2018 CH53_2594 21cbe612491a5be549c8fa844feba272 243 SUPERFAMILY SSF88697 2 68 6.71E-17 T 18-10-2018 IPR015947 PUA-like superfamily CH53_1351 adb491b6ae506f1b40fb127a0b04fab0 1098 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 471 807 1.4E-116 T 18-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CH53_1351 adb491b6ae506f1b40fb127a0b04fab0 1098 SUPERFAMILY SSF82689 978 1073 8.5E-15 T 18-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CH53_1351 adb491b6ae506f1b40fb127a0b04fab0 1098 Gene3D G3DSA:2.30.30.60 926 975 1.1E-10 T 18-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily CH53_1351 adb491b6ae506f1b40fb127a0b04fab0 1098 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 940 974 - T 18-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CH53_1351 adb491b6ae506f1b40fb127a0b04fab0 1098 Pfam PF12795 Mechanosensitive ion channel porin domain 20 249 3.0E-62 T 18-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain CH53_1351 adb491b6ae506f1b40fb127a0b04fab0 1098 Gene3D G3DSA:3.30.70.100 979 1071 2.6E-8 T 18-10-2018 CH53_1351 adb491b6ae506f1b40fb127a0b04fab0 1098 Pfam PF00924 Mechanosensitive ion channel 868 1066 3.3E-52 T 18-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CH53_1351 adb491b6ae506f1b40fb127a0b04fab0 1098 SUPERFAMILY SSF82861 826 909 3.53E-8 T 18-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CH53_1351 adb491b6ae506f1b40fb127a0b04fab0 1098 SUPERFAMILY SSF50182 911 976 9.81E-17 T 18-10-2018 IPR010920 LSM domain superfamily CH53_718 895fbae53392310f99e388cde3434e1a 344 SUPERFAMILY SSF51430 13 329 7.73E-87 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CH53_718 895fbae53392310f99e388cde3434e1a 344 Gene3D G3DSA:3.20.20.100 15 344 1.2E-122 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CH53_718 895fbae53392310f99e388cde3434e1a 344 Pfam PF00248 Aldo/keto reductase family 28 330 1.7E-74 T 18-10-2018 IPR023210 NADP-dependent oxidoreductase domain CH53_1790 0c67fccfd40878d5a583c673f03c0d8e 308 SUPERFAMILY SSF53613 5 304 9.67E-84 T 18-10-2018 IPR029056 Ribokinase-like CH53_1790 0c67fccfd40878d5a583c673f03c0d8e 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 7 301 1.3E-111 T 18-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CH53_1790 0c67fccfd40878d5a583c673f03c0d8e 308 Pfam PF00294 pfkB family carbohydrate kinase 5 296 8.1E-78 T 18-10-2018 IPR011611 Carbohydrate kinase PfkB CH53_1790 0c67fccfd40878d5a583c673f03c0d8e 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 18-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CH53_1790 0c67fccfd40878d5a583c673f03c0d8e 308 Hamap MF_01987 Ribokinase [rbsK]. 4 303 26.404 T 18-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CH53_1790 0c67fccfd40878d5a583c673f03c0d8e 308 Gene3D G3DSA:3.40.1190.20 3 302 1.5E-102 T 18-10-2018 IPR029056 Ribokinase-like CH53_1790 0c67fccfd40878d5a583c673f03c0d8e 308 PRINTS PR00990 Ribokinase signature 175 190 9.4E-38 T 18-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CH53_1790 0c67fccfd40878d5a583c673f03c0d8e 308 PRINTS PR00990 Ribokinase signature 219 230 9.4E-38 T 18-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CH53_1790 0c67fccfd40878d5a583c673f03c0d8e 308 PRINTS PR00990 Ribokinase signature 8 29 9.4E-38 T 18-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CH53_1790 0c67fccfd40878d5a583c673f03c0d8e 308 PRINTS PR00990 Ribokinase signature 35 54 9.4E-38 T 18-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CH53_1790 0c67fccfd40878d5a583c673f03c0d8e 308 PRINTS PR00990 Ribokinase signature 107 120 9.4E-38 T 18-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CH53_970 e2ee5eddc773c9223d94329ad6ad7de4 251 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 8 241 54.885 T 18-10-2018 IPR005224 Sugar fermentation stimulation protein CH53_970 e2ee5eddc773c9223d94329ad6ad7de4 251 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 12 237 1.5E-81 T 18-10-2018 IPR005224 Sugar fermentation stimulation protein CH53_970 e2ee5eddc773c9223d94329ad6ad7de4 251 Gene3D G3DSA:2.40.50.580 8 87 2.9E-28 T 18-10-2018 CH53_970 e2ee5eddc773c9223d94329ad6ad7de4 251 Pfam PF03749 Sugar fermentation stimulation protein 21 232 2.3E-75 T 18-10-2018 IPR005224 Sugar fermentation stimulation protein CH53_970 e2ee5eddc773c9223d94329ad6ad7de4 251 Gene3D G3DSA:3.40.1350.60 88 241 3.8E-55 T 18-10-2018 CH53_3035 65a10e7d3a17989a0031698faf649eb4 185 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 179 45.145 T 18-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CH53_3035 65a10e7d3a17989a0031698faf649eb4 185 PIRSF PIRSF003159 1 181 2.2E-87 T 18-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CH53_3035 65a10e7d3a17989a0031698faf649eb4 185 SUPERFAMILY SSF160930 5 161 2.62E-64 T 18-10-2018 CH53_3035 65a10e7d3a17989a0031698faf649eb4 185 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 180 2.0E-82 T 18-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CH53_3035 65a10e7d3a17989a0031698faf649eb4 185 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 173 5.1E-83 T 18-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CH53_4007 43e62475752f6d0e994ddd6c0dda46dd 110 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 26 89 2.0E-14 T 18-10-2018 CH53_4007 43e62475752f6d0e994ddd6c0dda46dd 110 Pfam PF13710 ACT domain 29 89 6.0E-8 T 18-10-2018 CH53_4007 43e62475752f6d0e994ddd6c0dda46dd 110 Gene3D G3DSA:3.30.70.260 11 107 3.7E-29 T 18-10-2018 CH53_4007 43e62475752f6d0e994ddd6c0dda46dd 110 SUPERFAMILY SSF55021 20 92 5.66E-16 T 18-10-2018 CH53_3447 5fa4628f23ab49ab107171fa95fa73fb 97 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 25.486 T 18-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CH53_3447 5fa4628f23ab49ab107171fa95fa73fb 97 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 1.8E-29 T 18-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CH53_3447 5fa4628f23ab49ab107171fa95fa73fb 97 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 86 1.6E-27 T 18-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CH53_3447 5fa4628f23ab49ab107171fa95fa73fb 97 PIRSF PIRSF002736 1 97 2.6E-37 T 18-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CH53_3447 5fa4628f23ab49ab107171fa95fa73fb 97 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 80 5.0E-26 T 18-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CH53_1047 1d1a38f575041b01dee594f337f030a4 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 255 1.0E-10 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_1047 1d1a38f575041b01dee594f337f030a4 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 376 525 3.6E-8 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_1047 1d1a38f575041b01dee594f337f030a4 535 SUPERFAMILY SSF161098 11 264 9.29E-43 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1047 1d1a38f575041b01dee594f337f030a4 535 Gene3D G3DSA:1.10.3720.10 289 534 1.0E-22 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1047 1d1a38f575041b01dee594f337f030a4 535 Gene3D G3DSA:1.10.3720.10 10 267 1.6E-42 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1047 1d1a38f575041b01dee594f337f030a4 535 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 2.5E-238 T 18-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 CH53_1047 1d1a38f575041b01dee594f337f030a4 535 SUPERFAMILY SSF161098 285 528 1.18E-27 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2210 e6312db6a04b8f146e50e72c5dd0aad5 311 Pfam PF13533 Biotin-lipoyl like 47 95 1.2E-18 T 18-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CH53_2210 e6312db6a04b8f146e50e72c5dd0aad5 311 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 251 1.0E-30 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CH53_2210 e6312db6a04b8f146e50e72c5dd0aad5 311 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 311 56.958 T 18-10-2018 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA CH53_2210 e6312db6a04b8f146e50e72c5dd0aad5 311 Gene3D G3DSA:2.40.50.100 46 191 3.7E-34 T 18-10-2018 CH53_2210 e6312db6a04b8f146e50e72c5dd0aad5 311 Gene3D G3DSA:1.10.287.470 80 156 3.7E-34 T 18-10-2018 CH53_2210 e6312db6a04b8f146e50e72c5dd0aad5 311 SUPERFAMILY SSF111369 46 243 1.44E-22 T 18-10-2018 CH53_2210 e6312db6a04b8f146e50e72c5dd0aad5 311 Pfam PF13437 HlyD family secretion protein 156 240 2.5E-9 T 18-10-2018 CH53_2210 e6312db6a04b8f146e50e72c5dd0aad5 311 Gene3D G3DSA:2.40.30.170 192 268 3.7E-34 T 18-10-2018 CH53_2638 01b741cbd0534407d5e4dc2ddbef9fe4 289 Gene3D G3DSA:1.20.58.410 1 40 4.5E-7 T 18-10-2018 CH53_2638 01b741cbd0534407d5e4dc2ddbef9fe4 289 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 169 185 - T 18-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CH53_2638 01b741cbd0534407d5e4dc2ddbef9fe4 289 Gene3D G3DSA:3.30.70.1660 54 282 6.3E-98 T 18-10-2018 CH53_2638 01b741cbd0534407d5e4dc2ddbef9fe4 289 SMART SM00937 9 119 1.2E-56 T 18-10-2018 IPR005139 Peptide chain release factor GO:0006415 CH53_2638 01b741cbd0534407d5e4dc2ddbef9fe4 289 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 287 2.7E-151 T 18-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CH53_2638 01b741cbd0534407d5e4dc2ddbef9fe4 289 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 4 289 32.023 T 18-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CH53_2638 01b741cbd0534407d5e4dc2ddbef9fe4 289 SUPERFAMILY SSF75620 2 288 5.1E-129 T 18-10-2018 CH53_2638 01b741cbd0534407d5e4dc2ddbef9fe4 289 Pfam PF00472 RF-1 domain 152 261 2.7E-41 T 18-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CH53_2638 01b741cbd0534407d5e4dc2ddbef9fe4 289 Pfam PF03462 PCRF domain 8 143 7.4E-46 T 18-10-2018 IPR005139 Peptide chain release factor GO:0006415 CH53_2638 01b741cbd0534407d5e4dc2ddbef9fe4 289 Gene3D G3DSA:3.30.160.20 150 245 6.3E-98 T 18-10-2018 CH53_1415 696cb7828c0e0d0848d1bc213a6ff3af 337 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 267 336 1.3E-10 T 18-10-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related CH53_1415 696cb7828c0e0d0848d1bc213a6ff3af 337 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 268 331 0.001 T 18-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA CH53_1415 696cb7828c0e0d0848d1bc213a6ff3af 337 Pfam PF09059 TyeA 269 333 5.1E-5 T 18-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA CH53_1415 696cb7828c0e0d0848d1bc213a6ff3af 337 SUPERFAMILY SSF140591 264 336 8.63E-21 T 18-10-2018 CH53_1415 696cb7828c0e0d0848d1bc213a6ff3af 337 Pfam PF07201 HrpJ-like domain 49 202 3.7E-7 T 18-10-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 CH53_1415 696cb7828c0e0d0848d1bc213a6ff3af 337 Gene3D G3DSA:1.20.1280.80 264 336 2.7E-6 T 18-10-2018 IPR038347 TyeA superfamily CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 SMART SM00831 51 124 1.7E-5 T 18-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 291 307 2.6E-84 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 709 724 2.6E-84 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 759 772 2.6E-84 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 412 425 2.6E-84 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 308 327 2.6E-84 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 814 835 2.6E-84 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 779 795 2.6E-84 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 727 738 2.6E-84 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 864 885 2.6E-84 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 622 740 4.4E-29 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 131 395 1.1E-33 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 Pfam PF00690 Cation transporter/ATPase, N-terminus 55 119 2.0E-13 T 18-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 Gene3D G3DSA:1.20.1110.10 696 842 2.1E-81 T 18-10-2018 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 Pfam PF00122 E1-E2 ATPase 160 358 3.2E-44 T 18-10-2018 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 Gene3D G3DSA:3.40.1110.10 437 558 2.1E-81 T 18-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 380 386 - T 18-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 SUPERFAMILY SSF56784 540 695 2.57E-37 T 18-10-2018 IPR036412 HAD-like superfamily CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 SUPERFAMILY SSF81665 54 908 9.15E-101 T 18-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 Pfam PF00702 haloacid dehalogenase-like hydrolase 374 665 3.8E-20 T 18-10-2018 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 Gene3D G3DSA:1.20.1110.10 102 374 4.9E-85 T 18-10-2018 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 Gene3D G3DSA:3.40.50.1000 559 695 2.1E-81 T 18-10-2018 IPR023214 HAD superfamily CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 Gene3D G3DSA:3.40.50.1000 375 387 4.9E-85 T 18-10-2018 IPR023214 HAD superfamily CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 Pfam PF00689 Cation transporting ATPase, C-terminus 734 900 7.3E-13 T 18-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 45 910 0.0 T 18-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 SUPERFAMILY SSF81660 347 555 1.77E-39 T 18-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 Gene3D G3DSA:2.70.150.10 66 281 4.9E-85 T 18-10-2018 CH53_2231 efb8d08f66905d0a0d6720b6f5b148e8 910 SUPERFAMILY SSF81653 175 276 3.79E-26 T 18-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CH53_410 a2888e64f589574e30280b156f432ef4 303 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 38.328 T 18-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CH53_410 a2888e64f589574e30280b156f432ef4 303 Pfam PF01039 Carboxyl transferase domain 56 241 1.4E-18 T 18-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 CH53_410 a2888e64f589574e30280b156f432ef4 303 SUPERFAMILY SSF52096 25 283 3.05E-87 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CH53_410 a2888e64f589574e30280b156f432ef4 303 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-36 T 18-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CH53_410 a2888e64f589574e30280b156f432ef4 303 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-36 T 18-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CH53_410 a2888e64f589574e30280b156f432ef4 303 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-36 T 18-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CH53_410 a2888e64f589574e30280b156f432ef4 303 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-36 T 18-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CH53_410 a2888e64f589574e30280b156f432ef4 303 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-36 T 18-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CH53_410 a2888e64f589574e30280b156f432ef4 303 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 4.8E-148 T 18-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CH53_410 a2888e64f589574e30280b156f432ef4 303 Gene3D G3DSA:3.90.226.10 25 287 3.0E-88 T 18-10-2018 CH53_1668 1edca4d698056a515db261e9365c97a0 255 SUPERFAMILY SSF49354 36 154 2.22E-37 T 18-10-2018 IPR008962 PapD-like superfamily CH53_1668 1edca4d698056a515db261e9365c97a0 255 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 234 4.1E-13 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_1668 1edca4d698056a515db261e9365c97a0 255 SUPERFAMILY SSF49584 159 246 6.28E-20 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_1668 1edca4d698056a515db261e9365c97a0 255 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 153 7.5E-38 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_1668 1edca4d698056a515db261e9365c97a0 255 Gene3D G3DSA:2.60.40.10 35 154 8.3E-40 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_1668 1edca4d698056a515db261e9365c97a0 255 Gene3D G3DSA:2.60.40.10 155 247 1.7E-19 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_1668 1edca4d698056a515db261e9365c97a0 255 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 111 128 - T 18-10-2018 IPR018046 Pili assembly chaperone, conserved site CH53_1668 1edca4d698056a515db261e9365c97a0 255 PRINTS PR00969 Pili chaperone signature 36 45 5.6E-33 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1668 1edca4d698056a515db261e9365c97a0 255 PRINTS PR00969 Pili chaperone signature 171 186 5.6E-33 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1668 1edca4d698056a515db261e9365c97a0 255 PRINTS PR00969 Pili chaperone signature 135 150 5.6E-33 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1668 1edca4d698056a515db261e9365c97a0 255 PRINTS PR00969 Pili chaperone signature 82 103 5.6E-33 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1668 1edca4d698056a515db261e9365c97a0 255 PRINTS PR00969 Pili chaperone signature 112 129 5.6E-33 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1580 98e800511b39c3e965e1d14b35e08915 734 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 136 207 1.2E-22 T 18-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CH53_1580 98e800511b39c3e965e1d14b35e08915 734 SUPERFAMILY SSF51011 624 725 7.32E-34 T 18-10-2018 CH53_1580 98e800511b39c3e965e1d14b35e08915 734 SMART SM00642 247 596 6.8E-7 T 18-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CH53_1580 98e800511b39c3e965e1d14b35e08915 734 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 2.3E-298 T 18-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 CH53_1580 98e800511b39c3e965e1d14b35e08915 734 SUPERFAMILY SSF81296 16 115 9.97E-17 T 18-10-2018 IPR014756 Immunoglobulin E-set CH53_1580 98e800511b39c3e965e1d14b35e08915 734 Pfam PF00128 Alpha amylase, catalytic domain 273 348 1.7E-9 T 18-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CH53_1580 98e800511b39c3e965e1d14b35e08915 734 SUPERFAMILY SSF81296 117 222 1.14E-34 T 18-10-2018 IPR014756 Immunoglobulin E-set CH53_1580 98e800511b39c3e965e1d14b35e08915 734 PIRSF PIRSF000463 6 730 2.6E-282 T 18-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CH53_1580 98e800511b39c3e965e1d14b35e08915 734 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 724 6.5E-21 T 18-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 CH53_1580 98e800511b39c3e965e1d14b35e08915 734 SUPERFAMILY SSF51445 230 621 4.1E-112 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_1580 98e800511b39c3e965e1d14b35e08915 734 Gene3D G3DSA:2.60.40.10 3 221 5.8E-77 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_1580 98e800511b39c3e965e1d14b35e08915 734 Gene3D G3DSA:2.60.40.1180 623 727 3.5E-37 T 18-10-2018 IPR013780 Glycosyl hydrolase, all-beta CH53_1580 98e800511b39c3e965e1d14b35e08915 734 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.506 T 18-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 CH53_1580 98e800511b39c3e965e1d14b35e08915 734 Gene3D G3DSA:3.20.20.80 231 612 4.4E-171 T 18-10-2018 CH53_419 7b524d8e378226864801a9b79f4b17c8 166 Pfam PF00578 AhpC/TSA family 39 134 7.2E-16 T 18-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CH53_419 7b524d8e378226864801a9b79f4b17c8 166 SUPERFAMILY SSF52833 11 155 5.97E-25 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_419 7b524d8e378226864801a9b79f4b17c8 166 Gene3D G3DSA:3.40.30.10 24 155 3.3E-23 T 18-10-2018 CH53_3272 ce576fd97528116ecef70dda49d47c5c 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 6.6E-49 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_1517 748467da139d10338e95645cb04185cd 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 18-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CH53_1517 748467da139d10338e95645cb04185cd 289 SUPERFAMILY SSF52540 4 286 1.46E-47 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1517 748467da139d10338e95645cb04185cd 289 Gene3D G3DSA:3.40.50.300 1 289 1.8E-115 T 18-10-2018 CH53_1517 748467da139d10338e95645cb04185cd 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 6.0E-29 T 18-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CH53_1517 748467da139d10338e95645cb04185cd 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 6.0E-29 T 18-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CH53_1517 748467da139d10338e95645cb04185cd 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 6.0E-29 T 18-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CH53_1517 748467da139d10338e95645cb04185cd 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 6.0E-29 T 18-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CH53_1517 748467da139d10338e95645cb04185cd 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 3.0E-74 T 18-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 CH53_476 b1e6acec4d8c647a2f0845e8adaf449c 263 Pfam PF00005 ABC transporter 24 172 9.2E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_476 b1e6acec4d8c647a2f0845e8adaf449c 263 Gene3D G3DSA:3.40.50.300 4 255 2.5E-62 T 18-10-2018 CH53_476 b1e6acec4d8c647a2f0845e8adaf449c 263 SUPERFAMILY SSF52540 6 241 7.77E-60 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_476 b1e6acec4d8c647a2f0845e8adaf449c 263 SMART SM00382 31 220 8.7E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_4342 25a8674a070bc728b816db3f490b998c 684 SUPERFAMILY SSF50993 3 414 2.33E-83 T 18-10-2018 CH53_4342 25a8674a070bc728b816db3f490b998c 684 SUPERFAMILY SSF53474 422 663 2.01E-47 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_4342 25a8674a070bc728b816db3f490b998c 684 Pfam PF00326 Prolyl oligopeptidase family 469 681 1.3E-69 T 18-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CH53_4342 25a8674a070bc728b816db3f490b998c 684 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 412 3.1E-95 T 18-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CH53_4342 25a8674a070bc728b816db3f490b998c 684 Gene3D G3DSA:3.40.50.1820 23 681 8.7E-248 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_4342 25a8674a070bc728b816db3f490b998c 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 538 558 7.5E-54 T 18-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CH53_4342 25a8674a070bc728b816db3f490b998c 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 614 636 7.5E-54 T 18-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CH53_4342 25a8674a070bc728b816db3f490b998c 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 596 611 7.5E-54 T 18-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CH53_4342 25a8674a070bc728b816db3f490b998c 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 508 527 7.5E-54 T 18-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CH53_4342 25a8674a070bc728b816db3f490b998c 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 480 504 7.5E-54 T 18-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CH53_4342 25a8674a070bc728b816db3f490b998c 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 454 472 7.5E-54 T 18-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CH53_4342 25a8674a070bc728b816db3f490b998c 684 Gene3D G3DSA:2.130.10.120 74 413 8.7E-248 T 18-10-2018 CH53_2277 d16355dcf2f7babbafff845660fdbc01 659 Gene3D G3DSA:1.25.40.650 148 255 9.1E-42 T 18-10-2018 CH53_2277 d16355dcf2f7babbafff845660fdbc01 659 SUPERFAMILY SSF53822 258 656 5.36E-77 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_2277 d16355dcf2f7babbafff845660fdbc01 659 Gene3D G3DSA:3.40.50.2300 512 656 1.4E-20 T 18-10-2018 CH53_2277 d16355dcf2f7babbafff845660fdbc01 659 Pfam PF04348 LppC putative lipoprotein 40 302 2.8E-54 T 18-10-2018 IPR007443 Penicillin-binding protein activator LpoA CH53_2277 d16355dcf2f7babbafff845660fdbc01 659 Pfam PF04348 LppC putative lipoprotein 329 653 4.5E-90 T 18-10-2018 IPR007443 Penicillin-binding protein activator LpoA CH53_2277 d16355dcf2f7babbafff845660fdbc01 659 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 6 653 37.221 T 18-10-2018 IPR007443 Penicillin-binding protein activator LpoA CH53_2277 d16355dcf2f7babbafff845660fdbc01 659 Gene3D G3DSA:1.25.40.10 24 147 3.4E-43 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_199 3099910ab27d025451aea1e6cabb623e 243 Gene3D G3DSA:3.40.190.10 108 201 1.8E-85 T 18-10-2018 CH53_199 3099910ab27d025451aea1e6cabb623e 243 SUPERFAMILY SSF53850 1 242 8.86E-75 T 18-10-2018 CH53_199 3099910ab27d025451aea1e6cabb623e 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 4.8E-88 T 18-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 CH53_199 3099910ab27d025451aea1e6cabb623e 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 18-10-2018 IPR018313 Solute-binding protein family 3, conserved site CH53_199 3099910ab27d025451aea1e6cabb623e 243 Gene3D G3DSA:3.40.190.10 26 240 1.8E-85 T 18-10-2018 CH53_199 3099910ab27d025451aea1e6cabb623e 243 SMART SM00079 22 243 4.9E-4 T 18-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CH53_199 3099910ab27d025451aea1e6cabb623e 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 1.5E-72 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_199 3099910ab27d025451aea1e6cabb623e 243 SMART SM00062 22 243 2.6E-87 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_2241 3865d09579873500b2d2c54d421a0ee9 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 4.0E-10 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_2241 3865d09579873500b2d2c54d421a0ee9 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 4.0E-10 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_2241 3865d09579873500b2d2c54d421a0ee9 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 4.0E-10 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_2241 3865d09579873500b2d2c54d421a0ee9 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 18-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CH53_2241 3865d09579873500b2d2c54d421a0ee9 90 Gene3D G3DSA:3.30.1340.10 1 85 5.7E-32 T 18-10-2018 IPR035895 HPr-like superfamily CH53_2241 3865d09579873500b2d2c54d421a0ee9 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 6.3E-23 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_2241 3865d09579873500b2d2c54d421a0ee9 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 84 7.1E-22 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_2241 3865d09579873500b2d2c54d421a0ee9 90 SUPERFAMILY SSF55594 4 90 4.58E-24 T 18-10-2018 IPR035895 HPr-like superfamily CH53_3846 9c8ccb6b93ff65266a84489dda0887b6 291 SUPERFAMILY SSF74650 8 285 1.07E-71 T 18-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CH53_3846 9c8ccb6b93ff65266a84489dda0887b6 291 PIRSF PIRSF016020 8 291 9.7E-55 T 18-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 CH53_3846 9c8ccb6b93ff65266a84489dda0887b6 291 Gene3D G3DSA:2.70.98.10 1 289 1.6E-93 T 18-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CH53_3846 9c8ccb6b93ff65266a84489dda0887b6 291 Pfam PF01263 Aldose 1-epimerase 28 272 9.5E-44 T 18-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CH53_3864 ab3b21f66f7ac1b16d7fefcc18cb9fd5 282 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 282 45.896 T 18-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CH53_3864 ab3b21f66f7ac1b16d7fefcc18cb9fd5 282 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 282 1.7E-129 T 18-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CH53_3864 ab3b21f66f7ac1b16d7fefcc18cb9fd5 282 Pfam PF00551 Formyl transferase 88 264 3.6E-53 T 18-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CH53_3864 ab3b21f66f7ac1b16d7fefcc18cb9fd5 282 Pfam PF01842 ACT domain 10 70 5.3E-7 T 18-10-2018 IPR002912 ACT domain CH53_3864 ab3b21f66f7ac1b16d7fefcc18cb9fd5 282 Gene3D G3DSA:3.40.50.170 86 282 1.3E-66 T 18-10-2018 CH53_3864 ab3b21f66f7ac1b16d7fefcc18cb9fd5 282 SUPERFAMILY SSF55021 9 58 2.46E-8 T 18-10-2018 CH53_3864 ab3b21f66f7ac1b16d7fefcc18cb9fd5 282 PIRSF PIRSF036480 6 282 8.5E-115 T 18-10-2018 CH53_3864 ab3b21f66f7ac1b16d7fefcc18cb9fd5 282 SUPERFAMILY SSF53328 88 281 6.54E-61 T 18-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CH53_3864 ab3b21f66f7ac1b16d7fefcc18cb9fd5 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 2.0E-68 T 18-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CH53_3864 ab3b21f66f7ac1b16d7fefcc18cb9fd5 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 2.0E-68 T 18-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CH53_3864 ab3b21f66f7ac1b16d7fefcc18cb9fd5 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 2.0E-68 T 18-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CH53_3864 ab3b21f66f7ac1b16d7fefcc18cb9fd5 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 2.0E-68 T 18-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CH53_3864 ab3b21f66f7ac1b16d7fefcc18cb9fd5 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 2.0E-68 T 18-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CH53_3864 ab3b21f66f7ac1b16d7fefcc18cb9fd5 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 43 55 2.0E-68 T 18-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CH53_3864 ab3b21f66f7ac1b16d7fefcc18cb9fd5 282 Gene3D G3DSA:3.30.70.260 3 84 1.4E-15 T 18-10-2018 CH53_602 6e5683d44b5d890fd0b4cc31a3e27d20 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 297 5.2E-13 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_602 6e5683d44b5d890fd0b4cc31a3e27d20 458 SUPERFAMILY SSF158472 182 230 2.35E-10 T 18-10-2018 CH53_602 6e5683d44b5d890fd0b4cc31a3e27d20 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 453 5.7E-22 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_602 6e5683d44b5d890fd0b4cc31a3e27d20 458 Gene3D G3DSA:3.30.565.10 303 455 4.7E-39 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_602 6e5683d44b5d890fd0b4cc31a3e27d20 458 SUPERFAMILY SSF47384 217 298 4.12E-15 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_602 6e5683d44b5d890fd0b4cc31a3e27d20 458 Pfam PF00672 HAMP domain 181 229 4.3E-13 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_602 6e5683d44b5d890fd0b4cc31a3e27d20 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 2.3E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_602 6e5683d44b5d890fd0b4cc31a3e27d20 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 2.3E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_602 6e5683d44b5d890fd0b4cc31a3e27d20 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 2.3E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_602 6e5683d44b5d890fd0b4cc31a3e27d20 458 SMART SM00304 181 233 1.6E-14 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_602 6e5683d44b5d890fd0b4cc31a3e27d20 458 SMART SM00387 343 455 3.4E-32 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_602 6e5683d44b5d890fd0b4cc31a3e27d20 458 Gene3D G3DSA:1.10.287.130 179 293 8.4E-28 T 18-10-2018 CH53_602 6e5683d44b5d890fd0b4cc31a3e27d20 458 SMART SM00388 234 298 5.9E-14 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_602 6e5683d44b5d890fd0b4cc31a3e27d20 458 SUPERFAMILY SSF55874 287 453 1.7E-40 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_2702 b2e1e40961cd14e4791f2857f1f78d50 269 SUPERFAMILY SSF69572 5 259 4.97E-64 T 18-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CH53_2702 b2e1e40961cd14e4791f2857f1f78d50 269 Gene3D G3DSA:3.40.50.720 1 269 2.2E-112 T 18-10-2018 CH53_2702 b2e1e40961cd14e4791f2857f1f78d50 269 Pfam PF00899 ThiF family 22 261 4.7E-38 T 18-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CH53_1006 ec92fd5b880951b831d336782a038055 250 Gene3D G3DSA:1.10.3900.10 16 182 4.4E-84 T 18-10-2018 CH53_1006 ec92fd5b880951b831d336782a038055 250 SUPERFAMILY SSF160950 6 250 8.76E-91 T 18-10-2018 IPR036268 ZapD domain superfamily CH53_1006 ec92fd5b880951b831d336782a038055 250 Pfam PF07072 Cell division protein 22 228 4.8E-77 T 18-10-2018 IPR009777 Cell division protein ZapD CH53_1006 ec92fd5b880951b831d336782a038055 250 Gene3D G3DSA:2.60.440.10 9 250 4.4E-84 T 18-10-2018 IPR027462 Z ring-associated protein D, C-terminal CH53_1006 ec92fd5b880951b831d336782a038055 250 Hamap MF_01092 Cell division protein ZapD [zapD]. 7 250 32.53 T 18-10-2018 IPR009777 Cell division protein ZapD CH53_2718 93d17946d9b94b959379607f8ee94905 892 SUPERFAMILY SSF109604 459 560 2.58E-13 T 18-10-2018 CH53_2718 93d17946d9b94b959379607f8ee94905 892 SUPERFAMILY SSF55021 815 874 2.6E-10 T 18-10-2018 CH53_2718 93d17946d9b94b959379607f8ee94905 892 SUPERFAMILY SSF81891 431 650 7.26E-9 T 18-10-2018 CH53_2718 93d17946d9b94b959379607f8ee94905 892 Pfam PF01842 ACT domain 817 871 3.6E-9 T 18-10-2018 IPR002912 ACT domain CH53_2718 93d17946d9b94b959379607f8ee94905 892 SMART SM00471 466 613 2.2E-11 T 18-10-2018 IPR003607 HD/PDEase domain CH53_2718 93d17946d9b94b959379607f8ee94905 892 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 892 345.488 T 18-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CH53_2718 93d17946d9b94b959379607f8ee94905 892 Pfam PF01909 Nucleotidyltransferase domain 86 141 1.3E-6 T 18-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CH53_2718 93d17946d9b94b959379607f8ee94905 892 SUPERFAMILY SSF55021 707 766 6.11E-9 T 18-10-2018 CH53_2718 93d17946d9b94b959379607f8ee94905 892 Gene3D G3DSA:1.10.3210.10 460 574 1.2E-7 T 18-10-2018 CH53_2718 93d17946d9b94b959379607f8ee94905 892 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 57 886 9.6E-302 T 18-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CH53_2718 93d17946d9b94b959379607f8ee94905 892 PIRSF PIRSF006288 26 892 0.0 T 18-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CH53_2718 93d17946d9b94b959379607f8ee94905 892 Pfam PF08335 GlnD PII-uridylyltransferase 194 333 1.3E-37 T 18-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CH53_2718 93d17946d9b94b959379607f8ee94905 892 Pfam PF01966 HD domain 470 603 6.3E-14 T 18-10-2018 IPR006674 HD domain CH53_2718 93d17946d9b94b959379607f8ee94905 892 SUPERFAMILY SSF81301 9 191 1.43E-23 T 18-10-2018 CH53_2718 93d17946d9b94b959379607f8ee94905 892 SUPERFAMILY SSF81593 209 330 1.18E-10 T 18-10-2018 CH53_300 e09271a09da2deafe93d15327ae0bb49 595 Pfam PF02743 Cache domain 40 254 1.2E-29 T 18-10-2018 IPR033479 Double Cache domain 1 CH53_300 e09271a09da2deafe93d15327ae0bb49 595 Gene3D G3DSA:3.30.450.20 64 168 2.5E-49 T 18-10-2018 CH53_300 e09271a09da2deafe93d15327ae0bb49 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 522 551 1.4E-51 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_300 e09271a09da2deafe93d15327ae0bb49 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 271 291 1.4E-51 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_300 e09271a09da2deafe93d15327ae0bb49 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 472 1.4E-51 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_300 e09271a09da2deafe93d15327ae0bb49 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 397 1.4E-51 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_300 e09271a09da2deafe93d15327ae0bb49 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 503 1.4E-51 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_300 e09271a09da2deafe93d15327ae0bb49 595 Gene3D G3DSA:3.30.450.20 55 262 2.5E-49 T 18-10-2018 CH53_300 e09271a09da2deafe93d15327ae0bb49 595 SUPERFAMILY SSF103190 89 177 7.06E-15 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CH53_300 e09271a09da2deafe93d15327ae0bb49 595 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 561 1.9E-50 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_300 e09271a09da2deafe93d15327ae0bb49 595 SMART SM00304 292 346 1.5E-9 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_300 e09271a09da2deafe93d15327ae0bb49 595 SUPERFAMILY SSF58104 314 595 2.09E-69 T 18-10-2018 CH53_300 e09271a09da2deafe93d15327ae0bb49 595 Gene3D G3DSA:1.10.287.950 292 595 6.9E-83 T 18-10-2018 CH53_300 e09271a09da2deafe93d15327ae0bb49 595 Pfam PF00672 HAMP domain 293 341 2.4E-8 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_300 e09271a09da2deafe93d15327ae0bb49 595 SMART SM00283 347 594 4.3E-84 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_2817 6487526443322dc84f039c6f184c8b55 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 1.8E-129 T 18-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 CH53_2817 6487526443322dc84f039c6f184c8b55 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 42.103 T 18-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 CH53_504 3431adb8f009b764a61342d0dbd4905d 321 Gene3D G3DSA:3.40.367.20 100 299 6.7E-118 T 18-10-2018 CH53_504 3431adb8f009b764a61342d0dbd4905d 321 Hamap MF_00524 Glucokinase [glk]. 4 316 35.972 T 18-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CH53_504 3431adb8f009b764a61342d0dbd4905d 321 Gene3D G3DSA:3.30.420.40 6 308 6.7E-118 T 18-10-2018 CH53_504 3431adb8f009b764a61342d0dbd4905d 321 TIGRFAM TIGR00749 glk: glucokinase 6 310 1.5E-140 T 18-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CH53_504 3431adb8f009b764a61342d0dbd4905d 321 SUPERFAMILY SSF53067 4 319 4.69E-65 T 18-10-2018 CH53_504 3431adb8f009b764a61342d0dbd4905d 321 Pfam PF02685 Glucokinase 6 315 5.4E-125 T 18-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CH53_1077 2259e040b7ea0527693e547431991c23 636 Gene3D G3DSA:3.30.420.40 180 366 7.4E-171 T 18-10-2018 CH53_1077 2259e040b7ea0527693e547431991c23 636 SUPERFAMILY SSF100920 384 540 1.14E-60 T 18-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 Gene3D G3DSA:2.60.34.10 383 523 7.6E-67 T 18-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 SUPERFAMILY SSF53067 4 183 2.7E-66 T 18-10-2018 CH53_1077 2259e040b7ea0527693e547431991c23 636 SUPERFAMILY SSF53067 187 382 1.04E-67 T 18-10-2018 CH53_1077 2259e040b7ea0527693e547431991c23 636 Gene3D G3DSA:3.30.420.40 5 379 7.4E-171 T 18-10-2018 CH53_1077 2259e040b7ea0527693e547431991c23 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 18-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 Gene3D G3DSA:1.20.1270.10 524 603 1.1E-29 T 18-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 SUPERFAMILY SSF100934 535 608 5.1E-7 T 18-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 PRINTS PR00301 70kDa heat shock protein signature 365 385 4.2E-79 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 PRINTS PR00301 70kDa heat shock protein signature 138 158 4.2E-79 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 PRINTS PR00301 70kDa heat shock protein signature 198 208 4.2E-79 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 PRINTS PR00301 70kDa heat shock protein signature 54 62 4.2E-79 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 4.2E-79 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 PRINTS PR00301 70kDa heat shock protein signature 469 485 4.2E-79 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 4.2E-79 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 PRINTS PR00301 70kDa heat shock protein signature 334 350 4.2E-79 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 PRINTS PR00301 70kDa heat shock protein signature 388 407 4.2E-79 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 1.0E-290 T 18-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 CH53_1077 2259e040b7ea0527693e547431991c23 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 18-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 Gene3D G3DSA:3.90.640.10 229 316 7.4E-171 T 18-10-2018 CH53_1077 2259e040b7ea0527693e547431991c23 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 18-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 Pfam PF00012 Hsp70 protein 4 602 3.0E-265 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CH53_1077 2259e040b7ea0527693e547431991c23 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.804 T 18-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 CH53_580 db4b7bc14f8ab67a1004a3565c61790d 480 Gene3D G3DSA:3.30.2010.10 66 143 1.2E-6 T 18-10-2018 CH53_580 db4b7bc14f8ab67a1004a3565c61790d 480 Gene3D G3DSA:1.25.40.10 183 477 2.9E-15 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_580 db4b7bc14f8ab67a1004a3565c61790d 480 Pfam PF14559 Tetratricopeptide repeat 346 411 2.8E-10 T 18-10-2018 CH53_580 db4b7bc14f8ab67a1004a3565c61790d 480 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 1 477 40.202 T 18-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 CH53_580 db4b7bc14f8ab67a1004a3565c61790d 480 Pfam PF01435 Peptidase family M48 64 251 3.6E-28 T 18-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CH53_580 db4b7bc14f8ab67a1004a3565c61790d 480 SUPERFAMILY SSF48452 301 426 1.65E-12 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1579 e6e5689961ff83c782fbfee4efcb3f23 662 SUPERFAMILY SSF51011 577 632 2.16E-5 T 18-10-2018 CH53_1579 e6e5689961ff83c782fbfee4efcb3f23 662 Gene3D G3DSA:2.60.40.1180 575 660 2.2E-34 T 18-10-2018 IPR013780 Glycosyl hydrolase, all-beta CH53_1579 e6e5689961ff83c782fbfee4efcb3f23 662 Pfam PF00128 Alpha amylase, catalytic domain 185 294 1.2E-6 T 18-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CH53_1579 e6e5689961ff83c782fbfee4efcb3f23 662 SUPERFAMILY SSF51445 130 567 8.86E-122 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_1579 e6e5689961ff83c782fbfee4efcb3f23 662 SMART SM00642 163 560 1.3E-6 T 18-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CH53_1579 e6e5689961ff83c782fbfee4efcb3f23 662 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 636 5.9E-267 T 18-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 CH53_1579 e6e5689961ff83c782fbfee4efcb3f23 662 Gene3D G3DSA:3.20.20.80 134 574 2.6E-170 T 18-10-2018 CH53_1579 e6e5689961ff83c782fbfee4efcb3f23 662 Gene3D G3DSA:2.60.40.10 1 133 1.2E-45 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_1579 e6e5689961ff83c782fbfee4efcb3f23 662 SUPERFAMILY SSF81296 7 144 3.08E-42 T 18-10-2018 IPR014756 Immunoglobulin E-set CH53_1579 e6e5689961ff83c782fbfee4efcb3f23 662 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 3 660 72.046 T 18-10-2018 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 CH53_1579 e6e5689961ff83c782fbfee4efcb3f23 662 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 95 8.3E-19 T 18-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CH53_1061 0ac5ec280d092fef0da78b5f2ddefdbc 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.4E-14 T 18-10-2018 CH53_1061 0ac5ec280d092fef0da78b5f2ddefdbc 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.4E-14 T 18-10-2018 CH53_1061 0ac5ec280d092fef0da78b5f2ddefdbc 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.4E-14 T 18-10-2018 CH53_1061 0ac5ec280d092fef0da78b5f2ddefdbc 160 PRINTS PR00070 Dihydrofolate reductase signature 91 105 1.4E-14 T 18-10-2018 CH53_1061 0ac5ec280d092fef0da78b5f2ddefdbc 160 SUPERFAMILY SSF53597 1 160 2.09E-56 T 18-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CH53_1061 0ac5ec280d092fef0da78b5f2ddefdbc 160 Gene3D G3DSA:3.40.430.10 1 160 1.5E-58 T 18-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CH53_1061 0ac5ec280d092fef0da78b5f2ddefdbc 160 Pfam PF00186 Dihydrofolate reductase 3 159 1.2E-57 T 18-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CH53_1061 0ac5ec280d092fef0da78b5f2ddefdbc 160 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 18-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 CH53_1061 0ac5ec280d092fef0da78b5f2ddefdbc 160 PIRSF PIRSF000194 1 160 5.0E-57 T 18-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 CH53_943 309aab1050c130cc4a1c8f4e0b149797 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 7.5E-49 T 18-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 CH53_943 309aab1050c130cc4a1c8f4e0b149797 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 7.8E-88 T 18-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CH53_943 309aab1050c130cc4a1c8f4e0b149797 244 PIRSF PIRSF000857 3 244 1.5E-53 T 18-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CH53_943 309aab1050c130cc4a1c8f4e0b149797 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 22 242 1.1E-93 T 18-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 CH53_943 309aab1050c130cc4a1c8f4e0b149797 244 SUPERFAMILY SSF52402 22 208 3.85E-53 T 18-10-2018 CH53_943 309aab1050c130cc4a1c8f4e0b149797 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 39.351 T 18-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CH53_943 309aab1050c130cc4a1c8f4e0b149797 244 Gene3D G3DSA:3.40.50.620 2 216 5.6E-63 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_1897 6983f7bdddd959bb05bae896e6314c6a 79 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.076 T 18-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 CH53_1897 6983f7bdddd959bb05bae896e6314c6a 79 Pfam PF06005 Cell division protein ZapB 1 78 1.8E-28 T 18-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 CH53_1897 6983f7bdddd959bb05bae896e6314c6a 79 Gene3D G3DSA:1.20.5.340 1 79 2.9E-33 T 18-10-2018 CH53_586 41ddb4d2b375eecba9ebb4e5079c7f62 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.644 T 18-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CH53_586 41ddb4d2b375eecba9ebb4e5079c7f62 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 18-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CH53_586 41ddb4d2b375eecba9ebb4e5079c7f62 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 4.2E-80 T 18-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CH53_586 41ddb4d2b375eecba9ebb4e5079c7f62 212 SUPERFAMILY SSF53328 2 207 2.88E-68 T 18-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CH53_586 41ddb4d2b375eecba9ebb4e5079c7f62 212 Gene3D G3DSA:3.40.50.170 2 212 3.3E-88 T 18-10-2018 CH53_586 41ddb4d2b375eecba9ebb4e5079c7f62 212 Pfam PF00551 Formyl transferase 2 182 4.7E-66 T 18-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CH53_1471 56a7de53caec126398e32f9a63c8b19e 167 SUPERFAMILY SSF54768 9 75 3.87E-23 T 18-10-2018 CH53_1471 56a7de53caec126398e32f9a63c8b19e 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.8E-28 T 18-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CH53_1471 56a7de53caec126398e32f9a63c8b19e 167 Gene3D G3DSA:3.30.160.20 1 73 2.3E-33 T 18-10-2018 CH53_1471 56a7de53caec126398e32f9a63c8b19e 167 SUPERFAMILY SSF54211 79 159 5.06E-27 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_1471 56a7de53caec126398e32f9a63c8b19e 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 2.4E-70 T 18-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CH53_1471 56a7de53caec126398e32f9a63c8b19e 167 Gene3D G3DSA:3.30.230.10 74 167 1.8E-38 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH53_1471 56a7de53caec126398e32f9a63c8b19e 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.59 T 18-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CH53_1471 56a7de53caec126398e32f9a63c8b19e 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 18-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site CH53_1471 56a7de53caec126398e32f9a63c8b19e 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 4.3E-30 T 18-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CH53_1538 009cbe54065b1891a9f83704232d1759 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 5.8E-12 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1538 009cbe54065b1891a9f83704232d1759 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 5.8E-12 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1538 009cbe54065b1891a9f83704232d1759 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 5.8E-12 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1538 009cbe54065b1891a9f83704232d1759 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 5.8E-12 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1538 009cbe54065b1891a9f83704232d1759 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 192 5.2E-37 T 18-10-2018 CH53_1538 009cbe54065b1891a9f83704232d1759 232 SUPERFAMILY SSF56784 5 222 3.76E-61 T 18-10-2018 IPR036412 HAD-like superfamily CH53_1538 009cbe54065b1891a9f83704232d1759 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 101 187 3.2E-10 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1538 009cbe54065b1891a9f83704232d1759 232 Gene3D G3DSA:1.10.150.240 22 92 6.7E-66 T 18-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CH53_1538 009cbe54065b1891a9f83704232d1759 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 192 1.1E-10 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1538 009cbe54065b1891a9f83704232d1759 232 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 221 2.0E-82 T 18-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CH53_1538 009cbe54065b1891a9f83704232d1759 232 Gene3D G3DSA:3.40.50.1000 10 215 6.7E-66 T 18-10-2018 IPR023214 HAD superfamily CH53_1538 009cbe54065b1891a9f83704232d1759 232 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 223 38.312 T 18-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CH53_1159 2eed0db4a85b63e4a3b7aec9953576aa 331 Gene3D G3DSA:1.10.10.10 13 76 3.4E-24 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1159 2eed0db4a85b63e4a3b7aec9953576aa 331 SUPERFAMILY SSF100950 80 330 1.35E-58 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_1159 2eed0db4a85b63e4a3b7aec9953576aa 331 Gene3D G3DSA:3.40.50.1360 82 329 8.8E-84 T 18-10-2018 CH53_1159 2eed0db4a85b63e4a3b7aec9953576aa 331 Pfam PF04198 Putative sugar-binding domain 80 328 7.3E-69 T 18-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 CH53_670 7809ade5a6a6d019cb87fe5b40b4cda6 181 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 68 105 - T 18-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CH53_670 7809ade5a6a6d019cb87fe5b40b4cda6 181 Pfam PF14437 MafB19-like deaminase 19 162 8.7E-30 T 18-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CH53_670 7809ade5a6a6d019cb87fe5b40b4cda6 181 Gene3D G3DSA:3.40.140.10 12 178 7.0E-64 T 18-10-2018 CH53_670 7809ade5a6a6d019cb87fe5b40b4cda6 181 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 23 164 46.567 T 18-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CH53_670 7809ade5a6a6d019cb87fe5b40b4cda6 181 SUPERFAMILY SSF53927 15 168 4.75E-56 T 18-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CH53_2157 c3d5e11089b1e9ffa7af83aedf658191 468 Gene3D G3DSA:1.10.860.10 17 180 1.8E-54 T 18-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CH53_2157 c3d5e11089b1e9ffa7af83aedf658191 468 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 1.8E-111 T 18-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CH53_2157 c3d5e11089b1e9ffa7af83aedf658191 468 SUPERFAMILY SSF48024 22 133 2.62E-38 T 18-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 CH53_2157 c3d5e11089b1e9ffa7af83aedf658191 468 SMART SM00382 220 426 3.6E-4 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2157 c3d5e11089b1e9ffa7af83aedf658191 468 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 2.2E-36 T 18-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CH53_2157 c3d5e11089b1e9ffa7af83aedf658191 468 Gene3D G3DSA:3.40.50.300 181 460 1.3E-105 T 18-10-2018 CH53_2157 c3d5e11089b1e9ffa7af83aedf658191 468 SUPERFAMILY SSF52540 201 452 1.05E-52 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2157 c3d5e11089b1e9ffa7af83aedf658191 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 23 461 1.2E-174 T 18-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CH53_2697 d8953b822538d26c5e378af64b8c9e54 416 Pfam PF11741 AMIN domain 39 142 3.8E-28 T 18-10-2018 IPR021731 AMIN domain CH53_2697 d8953b822538d26c5e378af64b8c9e54 416 SMART SM00646 250 404 3.9E-64 T 18-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CH53_2697 d8953b822538d26c5e378af64b8c9e54 416 Gene3D G3DSA:2.60.40.3500 24 145 5.7E-36 T 18-10-2018 CH53_2697 d8953b822538d26c5e378af64b8c9e54 416 SUPERFAMILY SSF53187 188 407 1.57E-54 T 18-10-2018 CH53_2697 d8953b822538d26c5e378af64b8c9e54 416 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 190 404 4.4E-52 T 18-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CH53_2697 d8953b822538d26c5e378af64b8c9e54 416 Gene3D G3DSA:3.40.630.40 175 415 1.2E-90 T 18-10-2018 CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 Gene3D G3DSA:2.40.30.10 176 288 1.9E-23 T 18-10-2018 CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 SUPERFAMILY SSF50447 180 299 1.04E-23 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 622 5.0E-209 T 18-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 Pfam PF00009 Elongation factor Tu GTP binding domain 2 167 1.5E-32 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 SUPERFAMILY SSF52540 2 170 4.94E-42 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 SUPERFAMILY SSF46785 431 498 7.89E-10 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 Gene3D G3DSA:1.10.10.10 502 561 4.5E-28 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.5E-7 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.5E-7 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.5E-7 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.5E-7 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 Pfam PF09107 Elongation factor SelB, winged helix 576 620 9.2E-19 T 18-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 SUPERFAMILY SSF46785 564 622 6.36E-14 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 SUPERFAMILY SSF50465 277 365 8.27E-8 T 18-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 18-10-2018 IPR031157 Tr-type G domain, conserved site CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 Pfam PF09106 Elongation factor SelB, winged helix 440 495 1.7E-15 T 18-10-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 Gene3D G3DSA:3.40.50.300 1 173 3.8E-45 T 18-10-2018 CH53_1675 30ec6315621e09082a7d68255dc2f55f 633 Gene3D G3DSA:1.10.10.10 562 622 3.5E-28 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2205 264b253b8e703288b5d3f17dd5d101e4 1268 Pfam PF13502 AsmA-like C-terminal region 1012 1254 8.5E-62 T 18-10-2018 IPR032712 AsmA-like, C-terminal CH53_2205 264b253b8e703288b5d3f17dd5d101e4 1268 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 1 1264 0.0 T 18-10-2018 IPR011836 Conserved hypothetical protein CHP02099 CH53_2205 264b253b8e703288b5d3f17dd5d101e4 1268 Pfam PF13116 Protein of unknown function 487 768 9.8E-99 T 18-10-2018 IPR025263 Domain of unknown function DUF3971 CH53_800 93f18cd87b776824af51b4b8a963de8d 373 PIRSF PIRSF001499 1 373 5.5E-181 T 18-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 CH53_800 93f18cd87b776824af51b4b8a963de8d 373 Gene3D G3DSA:1.10.3660.10 248 373 3.7E-51 T 18-10-2018 CH53_800 93f18cd87b776824af51b4b8a963de8d 373 SUPERFAMILY SSF48179 241 366 1.13E-41 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_800 93f18cd87b776824af51b4b8a963de8d 373 Gene3D G3DSA:1.20.59.10 1 93 1.1E-24 T 18-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CH53_800 93f18cd87b776824af51b4b8a963de8d 373 SMART SM00830 9 89 1.3E-29 T 18-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CH53_800 93f18cd87b776824af51b4b8a963de8d 373 Pfam PF01817 Chorismate mutase type II 9 86 2.3E-19 T 18-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CH53_800 93f18cd87b776824af51b4b8a963de8d 373 Pfam PF02153 Prephenate dehydrogenase 139 344 1.4E-32 T 18-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CH53_800 93f18cd87b776824af51b4b8a963de8d 373 SUPERFAMILY SSF48600 4 88 4.03E-23 T 18-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CH53_800 93f18cd87b776824af51b4b8a963de8d 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 7.7E-44 T 18-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 CH53_800 93f18cd87b776824af51b4b8a963de8d 373 Gene3D G3DSA:3.40.50.720 100 247 1.6E-19 T 18-10-2018 CH53_800 93f18cd87b776824af51b4b8a963de8d 373 SUPERFAMILY SSF51735 91 238 6.69E-39 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2713 a0892707d7a1a85d410d60ab63828525 110 SUPERFAMILY SSF158452 1 108 2.35E-38 T 18-10-2018 IPR036814 YqcC-like superfamily CH53_2713 a0892707d7a1a85d410d60ab63828525 110 Pfam PF04287 tRNA pseudouridine synthase C 6 104 1.5E-34 T 18-10-2018 IPR023376 YqcC-like domain CH53_2713 a0892707d7a1a85d410d60ab63828525 110 PIRSF PIRSF006257 1 109 9.2E-42 T 18-10-2018 IPR007384 Protein of unknown function UCP006257 CH53_2713 a0892707d7a1a85d410d60ab63828525 110 Gene3D G3DSA:1.20.1440.40 1 106 2.3E-34 T 18-10-2018 IPR036814 YqcC-like superfamily CH53_1319 412449adeb28742b094537dfc8466eca 221 Pfam PF01814 Hemerythrin HHE cation binding domain 81 217 1.8E-25 T 18-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CH53_1319 412449adeb28742b094537dfc8466eca 221 Gene3D G3DSA:1.20.120.520 35 220 9.4E-30 T 18-10-2018 CH53_1319 412449adeb28742b094537dfc8466eca 221 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 221 47.322 T 18-10-2018 IPR023742 Iron-sulfur cluster repair protein YftE GO:0030091 CH53_1319 412449adeb28742b094537dfc8466eca 221 Pfam PF04405 Domain of Unknown function (DUF542) 5 59 2.6E-20 T 18-10-2018 IPR019903 Repair of iron centres family CH53_1319 412449adeb28742b094537dfc8466eca 221 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 217 1.3E-81 T 18-10-2018 IPR019903 Repair of iron centres family CH53_377 32daaa257126c408a3cb641f26217f4f 914 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 2.6E-11 T 18-10-2018 CH53_377 32daaa257126c408a3cb641f26217f4f 914 Gene3D G3DSA:2.20.25.90 221 274 3.6E-13 T 18-10-2018 CH53_377 32daaa257126c408a3cb641f26217f4f 914 Gene3D G3DSA:3.10.20.740 1 127 8.2E-28 T 18-10-2018 CH53_377 32daaa257126c408a3cb641f26217f4f 914 SMART SM00929 88 128 1.9E-19 T 18-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_377 32daaa257126c408a3cb641f26217f4f 914 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 2.9E-10 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_377 32daaa257126c408a3cb641f26217f4f 914 SUPERFAMILY SSF54862 82 213 5.86E-34 T 18-10-2018 CH53_377 32daaa257126c408a3cb641f26217f4f 914 SUPERFAMILY SSF50692 821 897 1.29E-12 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CH53_377 32daaa257126c408a3cb641f26217f4f 914 Pfam PF01568 Molydopterin dinucleotide binding domain 832 896 4.5E-7 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CH53_377 32daaa257126c408a3cb641f26217f4f 914 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 661 1.7E-203 T 18-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_377 32daaa257126c408a3cb641f26217f4f 914 Gene3D G3DSA:3.40.50.740 532 667 4.5E-12 T 18-10-2018 CH53_377 32daaa257126c408a3cb641f26217f4f 914 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 18-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_377 32daaa257126c408a3cb641f26217f4f 914 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 18-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_377 32daaa257126c408a3cb641f26217f4f 914 Gene3D G3DSA:2.40.40.20 818 909 1.4E-8 T 18-10-2018 CH53_377 32daaa257126c408a3cb641f26217f4f 914 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 18-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_377 32daaa257126c408a3cb641f26217f4f 914 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 1.1E-14 T 18-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_377 32daaa257126c408a3cb641f26217f4f 914 SUPERFAMILY SSF53706 219 693 1.05E-80 T 18-10-2018 CH53_377 32daaa257126c408a3cb641f26217f4f 914 SMART SM00926 221 275 3.5E-10 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_377 32daaa257126c408a3cb641f26217f4f 914 SUPERFAMILY SSF54292 1 77 9.86E-19 T 18-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CH53_377 32daaa257126c408a3cb641f26217f4f 914 Pfam PF00384 Molybdopterin oxidoreductase 554 637 1.1E-8 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_1787 11dc197205eab263607cea5542ffde02 505 Pfam PF00005 ABC transporter 268 423 1.2E-23 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1787 11dc197205eab263607cea5542ffde02 505 Gene3D G3DSA:3.40.50.300 258 497 8.4E-48 T 18-10-2018 CH53_1787 11dc197205eab263607cea5542ffde02 505 SMART SM00382 277 473 3.6E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1787 11dc197205eab263607cea5542ffde02 505 SMART SM00382 29 226 1.8E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1787 11dc197205eab263607cea5542ffde02 505 SUPERFAMILY SSF52540 3 231 1.16E-55 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1787 11dc197205eab263607cea5542ffde02 505 Gene3D G3DSA:3.40.50.300 1 251 8.6E-54 T 18-10-2018 CH53_1787 11dc197205eab263607cea5542ffde02 505 SUPERFAMILY SSF52540 268 484 1.09E-49 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1787 11dc197205eab263607cea5542ffde02 505 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1787 11dc197205eab263607cea5542ffde02 505 Pfam PF00005 ABC transporter 22 169 1.0E-26 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1833 e91ab485448eb608cfe6ca11a836f70a 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 71 207 6.3E-16 T 18-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CH53_1833 e91ab485448eb608cfe6ca11a836f70a 288 Gene3D G3DSA:3.90.226.10 1 226 4.5E-80 T 18-10-2018 CH53_1833 e91ab485448eb608cfe6ca11a836f70a 288 SUPERFAMILY SSF52096 25 256 2.06E-32 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CH53_1992 9dfdbfe7ad7408d99202e502e0de271d 313 SUPERFAMILY SSF54782 220 309 7.72E-29 T 18-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CH53_1992 9dfdbfe7ad7408d99202e502e0de271d 313 Gene3D G3DSA:3.40.190.10 100 199 1.4E-82 T 18-10-2018 CH53_1992 9dfdbfe7ad7408d99202e502e0de271d 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 18-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CH53_1992 9dfdbfe7ad7408d99202e502e0de271d 313 PIRSF PIRSF001438 1 311 2.2E-119 T 18-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CH53_1992 9dfdbfe7ad7408d99202e502e0de271d 313 SUPERFAMILY SSF53850 5 219 1.9E-84 T 18-10-2018 CH53_1992 9dfdbfe7ad7408d99202e502e0de271d 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 1.2E-49 T 18-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CH53_1992 9dfdbfe7ad7408d99202e502e0de271d 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 1.2E-49 T 18-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CH53_1992 9dfdbfe7ad7408d99202e502e0de271d 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 1.2E-49 T 18-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CH53_1992 9dfdbfe7ad7408d99202e502e0de271d 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 1.2E-49 T 18-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CH53_1992 9dfdbfe7ad7408d99202e502e0de271d 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 1.2E-49 T 18-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CH53_1992 9dfdbfe7ad7408d99202e502e0de271d 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 1.1E-23 T 18-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CH53_1992 9dfdbfe7ad7408d99202e502e0de271d 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 7.8E-77 T 18-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CH53_1992 9dfdbfe7ad7408d99202e502e0de271d 313 Gene3D G3DSA:3.40.190.10 6 216 1.4E-82 T 18-10-2018 CH53_1992 9dfdbfe7ad7408d99202e502e0de271d 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 4.0E-110 T 18-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CH53_1992 9dfdbfe7ad7408d99202e502e0de271d 313 Gene3D G3DSA:3.30.160.40 221 306 3.5E-31 T 18-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CH53_1992 9dfdbfe7ad7408d99202e502e0de271d 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.079 T 18-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CH53_3311 d2be9bbea543fd60aa7c2f33818bdf72 449 Pfam PF00534 Glycosyl transferases group 1 267 414 1.0E-15 T 18-10-2018 IPR001296 Glycosyl transferase, family 1 CH53_3311 d2be9bbea543fd60aa7c2f33818bdf72 449 Gene3D G3DSA:3.40.50.2000 262 425 1.9E-20 T 18-10-2018 CH53_3311 d2be9bbea543fd60aa7c2f33818bdf72 449 SUPERFAMILY SSF53756 165 423 1.26E-26 T 18-10-2018 CH53_4155 f37d38f61ffc95f094d790df2718f198 297 SMART SM00843 2 65 2.3E-23 T 18-10-2018 IPR018541 FtsK gamma domain CH53_4155 f37d38f61ffc95f094d790df2718f198 297 Pfam PF09397 Ftsk gamma domain 2 61 3.9E-22 T 18-10-2018 IPR018541 FtsK gamma domain CH53_4155 f37d38f61ffc95f094d790df2718f198 297 Gene3D G3DSA:1.10.10.10 1 61 2.2E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4155 f37d38f61ffc95f094d790df2718f198 297 SUPERFAMILY SSF46785 2 63 5.37E-17 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2415 6dd84eaa5dc92baf7f4be2c74e1565dd 338 Gene3D G3DSA:3.30.1330.10 7 160 4.3E-58 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CH53_2415 6dd84eaa5dc92baf7f4be2c74e1565dd 338 Pfam PF02769 AIR synthase related protein, C-terminal domain 167 314 6.2E-27 T 18-10-2018 IPR010918 PurM-like, C-terminal domain CH53_2415 6dd84eaa5dc92baf7f4be2c74e1565dd 338 SUPERFAMILY SSF56042 165 333 1.33E-42 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CH53_2415 6dd84eaa5dc92baf7f4be2c74e1565dd 338 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 6 338 7.9E-138 T 18-10-2018 IPR011854 Carbamoyl dehydratase HypE CH53_2415 6dd84eaa5dc92baf7f4be2c74e1565dd 338 SUPERFAMILY SSF55326 5 159 2.79E-35 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CH53_2415 6dd84eaa5dc92baf7f4be2c74e1565dd 338 Gene3D G3DSA:3.90.650.10 161 338 3.6E-54 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CH53_2415 6dd84eaa5dc92baf7f4be2c74e1565dd 338 Pfam PF00586 AIR synthase related protein, N-terminal domain 55 155 2.7E-17 T 18-10-2018 IPR016188 PurM-like, N-terminal domain CH53_2415 6dd84eaa5dc92baf7f4be2c74e1565dd 338 PIRSF PIRSF005644 1 338 1.6E-124 T 18-10-2018 IPR011854 Carbamoyl dehydratase HypE CH53_1826 bc88b31e7c11f150aa166f4331a6bb0f 700 Pfam PF13328 HD domain 26 175 4.1E-53 T 18-10-2018 IPR003607 HD/PDEase domain CH53_1826 bc88b31e7c11f150aa166f4331a6bb0f 700 Pfam PF02824 TGS domain 388 447 1.2E-20 T 18-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CH53_1826 bc88b31e7c11f150aa166f4331a6bb0f 700 SUPERFAMILY SSF109604 3 190 2.39E-75 T 18-10-2018 CH53_1826 bc88b31e7c11f150aa166f4331a6bb0f 700 SUPERFAMILY SSF81271 375 447 6.32E-21 T 18-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CH53_1826 bc88b31e7c11f150aa166f4331a6bb0f 700 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 696 8.5E-287 T 18-10-2018 IPR004811 RelA/SpoT family GO:0015969 CH53_1826 bc88b31e7c11f150aa166f4331a6bb0f 700 Gene3D G3DSA:3.30.460.10 193 325 5.7E-48 T 18-10-2018 CH53_1826 bc88b31e7c11f150aa166f4331a6bb0f 700 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.1E-35 T 18-10-2018 IPR007685 RelA/SpoT GO:0015969 CH53_1826 bc88b31e7c11f150aa166f4331a6bb0f 700 Gene3D G3DSA:3.10.20.30 381 455 1.2E-29 T 18-10-2018 IPR012675 Beta-grasp domain superfamily CH53_1826 bc88b31e7c11f150aa166f4331a6bb0f 700 Gene3D G3DSA:3.30.70.260 621 700 2.3E-13 T 18-10-2018 CH53_1826 bc88b31e7c11f150aa166f4331a6bb0f 700 SUPERFAMILY SSF55021 627 697 3.41E-5 T 18-10-2018 CH53_1826 bc88b31e7c11f150aa166f4331a6bb0f 700 SMART SM00471 41 153 1.3E-11 T 18-10-2018 IPR003607 HD/PDEase domain CH53_1826 bc88b31e7c11f150aa166f4331a6bb0f 700 SUPERFAMILY SSF81301 180 392 4.41E-62 T 18-10-2018 CH53_1826 bc88b31e7c11f150aa166f4331a6bb0f 700 SMART SM00954 235 345 3.0E-62 T 18-10-2018 IPR007685 RelA/SpoT GO:0015969 CH53_1826 bc88b31e7c11f150aa166f4331a6bb0f 700 Gene3D G3DSA:1.10.3210.10 3 190 1.0E-80 T 18-10-2018 CH53_1826 bc88b31e7c11f150aa166f4331a6bb0f 700 Pfam PF13291 ACT domain 620 697 1.4E-15 T 18-10-2018 IPR002912 ACT domain CH53_1977 6f5699c8a945d08abf4edc6ae60c76a7 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 3.9E-160 T 18-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CH53_1977 6f5699c8a945d08abf4edc6ae60c76a7 293 Gene3D G3DSA:3.90.550.10 1 293 5.9E-86 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_1977 6f5699c8a945d08abf4edc6ae60c76a7 293 Pfam PF00483 Nucleotidyl transferase 2 238 9.0E-71 T 18-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CH53_1977 6f5699c8a945d08abf4edc6ae60c76a7 293 SUPERFAMILY SSF53448 1 286 1.94E-93 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_2259 7ec2695cf400090d1bc14fe27f32af82 364 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 5.4E-47 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_2259 7ec2695cf400090d1bc14fe27f32af82 364 PRINTS PR00834 HtrA/DegQ protease family signature 150 174 5.4E-47 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_2259 7ec2695cf400090d1bc14fe27f32af82 364 PRINTS PR00834 HtrA/DegQ protease family signature 185 202 5.4E-47 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_2259 7ec2695cf400090d1bc14fe27f32af82 364 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 5.4E-47 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_2259 7ec2695cf400090d1bc14fe27f32af82 364 PRINTS PR00834 HtrA/DegQ protease family signature 207 224 5.4E-47 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_2259 7ec2695cf400090d1bc14fe27f32af82 364 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 5.4E-47 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_2259 7ec2695cf400090d1bc14fe27f32af82 364 SUPERFAMILY SSF50156 239 346 5.52E-20 T 18-10-2018 IPR036034 PDZ superfamily GO:0005515 CH53_2259 7ec2695cf400090d1bc14fe27f32af82 364 Gene3D G3DSA:2.30.42.10 257 350 6.0E-19 T 18-10-2018 CH53_2259 7ec2695cf400090d1bc14fe27f32af82 364 SUPERFAMILY SSF50494 45 253 2.75E-58 T 18-10-2018 IPR009003 Peptidase S1, PA clan CH53_2259 7ec2695cf400090d1bc14fe27f32af82 364 Gene3D G3DSA:2.40.10.10 33 140 1.1E-27 T 18-10-2018 CH53_2259 7ec2695cf400090d1bc14fe27f32af82 364 SMART SM00228 256 338 5.4E-10 T 18-10-2018 IPR001478 PDZ domain GO:0005515 CH53_2259 7ec2695cf400090d1bc14fe27f32af82 364 Pfam PF13365 Trypsin-like peptidase domain 80 214 2.0E-26 T 18-10-2018 CH53_2259 7ec2695cf400090d1bc14fe27f32af82 364 Pfam PF13180 PDZ domain 274 346 1.3E-11 T 18-10-2018 IPR001478 PDZ domain GO:0005515 CH53_2259 7ec2695cf400090d1bc14fe27f32af82 364 Gene3D G3DSA:2.40.10.10 141 256 5.4E-39 T 18-10-2018 CH53_2259 7ec2695cf400090d1bc14fe27f32af82 364 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 349 3.7E-153 T 18-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 CH53_1617 b27e4f7d0129bb319680541be5220ba5 261 PIRSF PIRSF001273 5 252 2.3E-98 T 18-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CH53_1617 b27e4f7d0129bb319680541be5220ba5 261 Gene3D G3DSA:3.30.428.30 26 251 2.9E-87 T 18-10-2018 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily KEGG: 00564+3.6.1.26 CH53_1617 b27e4f7d0129bb319680541be5220ba5 261 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 32 249 1.1E-86 T 18-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CH53_1617 b27e4f7d0129bb319680541be5220ba5 261 Hamap MF_00319 CDP-diacylglycerol pyrophosphatase [cdh]. 5 251 39.826 T 18-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CH53_1617 b27e4f7d0129bb319680541be5220ba5 261 SUPERFAMILY SSF54197 32 249 5.1E-84 T 18-10-2018 IPR036265 HIT-like superfamily CH53_1931 d6fba5767c3f7bee67a23ef3c1a444f7 131 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 2 114 8.0E-43 T 18-10-2018 IPR009867 Protein of unknown function DUF1422 CH53_1931 d6fba5767c3f7bee67a23ef3c1a444f7 131 Pfam PF07226 Protein of unknown function (DUF1422) 2 114 3.0E-50 T 18-10-2018 IPR009867 Protein of unknown function DUF1422 CH53_4387 6c9f18b64f1802c9ca56bc988d1c3671 141 Gene3D G3DSA:1.10.10.10 9 136 5.1E-39 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4387 6c9f18b64f1802c9ca56bc988d1c3671 141 SUPERFAMILY SSF46785 22 126 1.46E-30 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_4387 6c9f18b64f1802c9ca56bc988d1c3671 141 Pfam PF01638 HxlR-like helix-turn-helix 38 125 1.0E-27 T 18-10-2018 IPR002577 Helix-turn-helix, HxlR type CH53_1512 8e159e0d48febe4084f1bac3d8645a11 342 Gene3D G3DSA:1.10.8.450 247 290 1.2E-48 T 18-10-2018 CH53_1512 8e159e0d48febe4084f1bac3d8645a11 342 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 39 334 2.4E-136 T 18-10-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 CH53_1512 8e159e0d48febe4084f1bac3d8645a11 342 Gene3D G3DSA:3.40.190.10 116 211 1.2E-48 T 18-10-2018 CH53_1512 8e159e0d48febe4084f1bac3d8645a11 342 Gene3D G3DSA:3.40.190.10 40 318 1.2E-48 T 18-10-2018 CH53_1512 8e159e0d48febe4084f1bac3d8645a11 342 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 38 242 1.1E-21 T 18-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 CH53_1512 8e159e0d48febe4084f1bac3d8645a11 342 SMART SM00062 38 253 1.2E-21 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_1512 8e159e0d48febe4084f1bac3d8645a11 342 SUPERFAMILY SSF53850 48 320 1.64E-45 T 18-10-2018 CH53_2045 8f805b942b7dd7f12e0580a2da7c8990 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 293 2.2E-18 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_2045 8f805b942b7dd7f12e0580a2da7c8990 295 Gene3D G3DSA:1.10.3720.10 52 293 2.3E-57 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2045 8f805b942b7dd7f12e0580a2da7c8990 295 SUPERFAMILY SSF161098 56 283 9.03E-50 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 473 1.4E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 Gene3D G3DSA:3.30.450.20 48 166 1.1E-6 T 18-10-2018 CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 319 5.4E-12 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 SMART SM00388 255 320 2.3E-13 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 SUPERFAMILY SSF47384 254 319 1.29E-12 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 Pfam PF00672 HAMP domain 204 250 1.2E-6 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 Gene3D G3DSA:1.10.287.130 204 316 3.9E-14 T 18-10-2018 CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 SUPERFAMILY SSF103190 44 170 1.49E-14 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 Gene3D G3DSA:3.30.565.10 324 475 1.0E-32 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 SMART SM00304 204 255 0.0089 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 Pfam PF14827 Double sensory domain of two-component sensor kinase 56 168 9.2E-8 T 18-10-2018 IPR029150 Double Cache domain 3 CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 1.6E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 471 1.6E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 452 1.6E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 1.6E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 SMART SM00387 364 474 4.2E-28 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_2631 df072c8ca09c6a2ece48802af5570aac 475 SUPERFAMILY SSF55874 311 472 3.8E-36 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_568 e2f3297be9ebd70e89a1236a7a5ae7e2 211 Pfam PF02230 Phospholipase/Carboxylesterase 6 205 5.2E-34 T 18-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 CH53_568 e2f3297be9ebd70e89a1236a7a5ae7e2 211 Gene3D G3DSA:3.40.50.1820 2 206 4.6E-34 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_568 e2f3297be9ebd70e89a1236a7a5ae7e2 211 SUPERFAMILY SSF53474 9 206 2.47E-31 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2633 19dc397af35bcfc21d0550fff180ec25 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 3.7E-72 T 18-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 CH53_2633 19dc397af35bcfc21d0550fff180ec25 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 18-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CH53_2633 19dc397af35bcfc21d0550fff180ec25 172 PIRSF PIRSF038996 1 170 3.0E-55 T 18-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 CH53_2633 19dc397af35bcfc21d0550fff180ec25 172 Pfam PF00258 Flavodoxin 5 160 5.8E-27 T 18-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CH53_2633 19dc397af35bcfc21d0550fff180ec25 172 SUPERFAMILY SSF52218 1 168 1.71E-46 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_2633 19dc397af35bcfc21d0550fff180ec25 172 Gene3D G3DSA:3.40.50.360 1 171 1.4E-47 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_712 78ddb848df09de522f6fd8b781f2d494 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 3.6E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_712 78ddb848df09de522f6fd8b781f2d494 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 3.6E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_712 78ddb848df09de522f6fd8b781f2d494 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 218 260 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CH53_712 78ddb848df09de522f6fd8b781f2d494 276 Gene3D G3DSA:2.60.120.10 4 97 3.2E-8 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_712 78ddb848df09de522f6fd8b781f2d494 276 Pfam PF02311 AraC-like ligand binding domain 24 73 2.1E-4 T 18-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CH53_712 78ddb848df09de522f6fd8b781f2d494 276 Gene3D G3DSA:1.10.10.60 170 269 1.7E-18 T 18-10-2018 CH53_712 78ddb848df09de522f6fd8b781f2d494 276 SUPERFAMILY SSF46689 217 267 2.51E-11 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_712 78ddb848df09de522f6fd8b781f2d494 276 Pfam PF12833 Helix-turn-helix domain 192 265 8.1E-16 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_712 78ddb848df09de522f6fd8b781f2d494 276 SUPERFAMILY SSF51182 9 86 2.13E-11 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_712 78ddb848df09de522f6fd8b781f2d494 276 SMART SM00342 182 264 1.6E-16 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_2246 cebacc69ea6eea927f066b02a7795a7e 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 5.2E-123 T 18-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 CH53_2246 cebacc69ea6eea927f066b02a7795a7e 241 Gene3D G3DSA:3.40.50.300 2 241 3.6E-72 T 18-10-2018 CH53_2246 cebacc69ea6eea927f066b02a7795a7e 241 SUPERFAMILY SSF52540 4 236 7.99E-66 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2246 cebacc69ea6eea927f066b02a7795a7e 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 6.3E-9 T 18-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CH53_2246 cebacc69ea6eea927f066b02a7795a7e 241 Pfam PF00005 ABC transporter 20 166 6.7E-35 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2246 cebacc69ea6eea927f066b02a7795a7e 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2246 cebacc69ea6eea927f066b02a7795a7e 241 SMART SM00382 28 231 2.7E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2224 6d244e66deae36d191c4f1f8b439da6f 389 TIGRFAM TIGR03583 EF_0837: putative amidohydrolase, EF_0837/AHA_3915 family 2 376 1.0E-166 T 18-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 CH53_2224 6d244e66deae36d191c4f1f8b439da6f 389 SUPERFAMILY SSF51338 1 376 1.73E-17 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_2224 6d244e66deae36d191c4f1f8b439da6f 389 PIRSF PIRSF039004 1 387 4.1E-133 T 18-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 CH53_2224 6d244e66deae36d191c4f1f8b439da6f 389 SUPERFAMILY SSF51556 63 328 1.83E-72 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_2224 6d244e66deae36d191c4f1f8b439da6f 389 Gene3D G3DSA:3.20.20.140 63 328 1.5E-119 T 18-10-2018 CH53_2224 6d244e66deae36d191c4f1f8b439da6f 389 Gene3D G3DSA:2.30.40.10 7 373 1.5E-119 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_2224 6d244e66deae36d191c4f1f8b439da6f 389 Pfam PF01979 Amidohydrolase family 60 359 3.0E-11 T 18-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CH53_2353 df1549a22c8cad511b4710aa1c5e1300 456 SMART SM00387 351 456 6.0E-21 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_2353 df1549a22c8cad511b4710aa1c5e1300 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 5.2E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2353 df1549a22c8cad511b4710aa1c5e1300 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 5.2E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2353 df1549a22c8cad511b4710aa1c5e1300 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 5.2E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2353 df1549a22c8cad511b4710aa1c5e1300 456 Gene3D G3DSA:1.10.287.130 203 314 6.0E-15 T 18-10-2018 CH53_2353 df1549a22c8cad511b4710aa1c5e1300 456 SMART SM00304 206 258 0.0031 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_2353 df1549a22c8cad511b4710aa1c5e1300 456 SMART SM00388 259 317 0.0092 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_2353 df1549a22c8cad511b4710aa1c5e1300 456 SUPERFAMILY SSF47384 244 302 5.49E-10 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_2353 df1549a22c8cad511b4710aa1c5e1300 456 SUPERFAMILY SSF55874 317 452 3.14E-27 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_2353 df1549a22c8cad511b4710aa1c5e1300 456 Gene3D G3DSA:3.30.565.10 319 454 6.2E-26 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_2353 df1549a22c8cad511b4710aa1c5e1300 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 453 1.2E-14 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_1260 c96d818f54ebfccd82bc53ac8fee4c0e 382 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 2 381 9.0E-151 T 18-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CH53_1260 c96d818f54ebfccd82bc53ac8fee4c0e 382 Gene3D G3DSA:3.20.20.140 50 115 4.2E-7 T 18-10-2018 CH53_1260 c96d818f54ebfccd82bc53ac8fee4c0e 382 Gene3D G3DSA:2.30.40.10 2 49 4.2E-7 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_1260 c96d818f54ebfccd82bc53ac8fee4c0e 382 SUPERFAMILY SSF51338 2 381 1.3E-8 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_1260 c96d818f54ebfccd82bc53ac8fee4c0e 382 Pfam PF07969 Amidohydrolase family 228 379 3.6E-10 T 18-10-2018 IPR013108 Amidohydrolase 3 CH53_1260 c96d818f54ebfccd82bc53ac8fee4c0e 382 Gene3D G3DSA:3.20.20.140 322 340 2.0E-7 T 18-10-2018 CH53_1260 c96d818f54ebfccd82bc53ac8fee4c0e 382 Gene3D G3DSA:2.30.40.10 341 372 2.0E-7 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_1260 c96d818f54ebfccd82bc53ac8fee4c0e 382 PIRSF PIRSF038971 1 382 2.8E-151 T 18-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CH53_1260 c96d818f54ebfccd82bc53ac8fee4c0e 382 SUPERFAMILY SSF51556 50 345 4.16E-20 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_2245 a023b382cf65226bba9a49e8ef5d3275 477 PIRSF PIRSF000774 1 477 2.6E-147 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CH53_2245 a023b382cf65226bba9a49e8ef5d3275 477 Gene3D G3DSA:1.10.10.60 417 474 1.9E-22 T 18-10-2018 CH53_2245 a023b382cf65226bba9a49e8ef5d3275 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CH53_2245 a023b382cf65226bba9a49e8ef5d3275 477 PRINTS PR00045 Sigma-54 factor signature 186 203 7.3E-32 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CH53_2245 a023b382cf65226bba9a49e8ef5d3275 477 PRINTS PR00045 Sigma-54 factor signature 376 388 7.3E-32 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CH53_2245 a023b382cf65226bba9a49e8ef5d3275 477 PRINTS PR00045 Sigma-54 factor signature 450 468 7.3E-32 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CH53_2245 a023b382cf65226bba9a49e8ef5d3275 477 PRINTS PR00045 Sigma-54 factor signature 392 403 7.3E-32 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CH53_2245 a023b382cf65226bba9a49e8ef5d3275 477 Gene3D G3DSA:1.10.10.1330 116 251 3.1E-24 T 18-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CH53_2245 a023b382cf65226bba9a49e8ef5d3275 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CH53_2245 a023b382cf65226bba9a49e8ef5d3275 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 474 2.1E-157 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CH53_2245 a023b382cf65226bba9a49e8ef5d3275 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 4.7E-60 T 18-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 CH53_2245 a023b382cf65226bba9a49e8ef5d3275 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 3.2E-69 T 18-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding CH53_2245 a023b382cf65226bba9a49e8ef5d3275 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 4.0E-15 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CH53_1853 fa6d596a6fd586dc0dd9414895a26fe2 213 Pfam PF00156 Phosphoribosyl transferase domain 48 159 2.8E-12 T 18-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CH53_1853 fa6d596a6fd586dc0dd9414895a26fe2 213 Gene3D G3DSA:3.40.50.2020 1 213 1.7E-77 T 18-10-2018 CH53_1853 fa6d596a6fd586dc0dd9414895a26fe2 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.652 T 18-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_1853 fa6d596a6fd586dc0dd9414895a26fe2 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.1E-66 T 18-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_1853 fa6d596a6fd586dc0dd9414895a26fe2 213 SUPERFAMILY SSF53271 2 212 8.24E-49 T 18-10-2018 IPR029057 Phosphoribosyltransferase-like CH53_400 69a418e1f5917904fac291edbde0330d 302 Gene3D G3DSA:3.40.50.720 2 300 2.6E-77 T 18-10-2018 CH53_400 69a418e1f5917904fac291edbde0330d 302 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 1.8E-20 T 18-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CH53_400 69a418e1f5917904fac291edbde0330d 302 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 8.8E-112 T 18-10-2018 IPR010099 Epimerase family protein SDR39U1 CH53_400 69a418e1f5917904fac291edbde0330d 302 Pfam PF08338 Domain of unknown function (DUF1731) 250 295 1.9E-19 T 18-10-2018 IPR013549 Domain of unknown function DUF1731 CH53_400 69a418e1f5917904fac291edbde0330d 302 SUPERFAMILY SSF51735 1 297 1.71E-43 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_4335 09b36d1a53f1e07927d3163d9d68d637 294 Pfam PF05425 Copper resistance protein D 189 287 3.5E-17 T 18-10-2018 IPR008457 Copper resistance protein D GO:0016021 CH53_3172 1c1054b4be9e1dcec3e163c7ac43b59e 349 Gene3D G3DSA:3.30.428.10 44 175 7.2E-58 T 18-10-2018 IPR036265 HIT-like superfamily CH53_3172 1c1054b4be9e1dcec3e163c7ac43b59e 349 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 184 346 8.7E-67 T 18-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CH53_3172 1c1054b4be9e1dcec3e163c7ac43b59e 349 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 18-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CH53_3172 1c1054b4be9e1dcec3e163c7ac43b59e 349 SUPERFAMILY SSF54197 179 345 1.7E-53 T 18-10-2018 IPR036265 HIT-like superfamily CH53_3172 1c1054b4be9e1dcec3e163c7ac43b59e 349 SUPERFAMILY SSF54197 4 177 7.09E-74 T 18-10-2018 IPR036265 HIT-like superfamily CH53_3172 1c1054b4be9e1dcec3e163c7ac43b59e 349 PIRSF PIRSF000808 1 341 6.1E-121 T 18-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CH53_3172 1c1054b4be9e1dcec3e163c7ac43b59e 349 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 4 176 2.6E-71 T 18-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CH53_3172 1c1054b4be9e1dcec3e163c7ac43b59e 349 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 347 1.1E-197 T 18-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CH53_3172 1c1054b4be9e1dcec3e163c7ac43b59e 349 Gene3D G3DSA:3.30.428.10 176 348 1.1E-67 T 18-10-2018 IPR036265 HIT-like superfamily CH53_3061 db05a17993c10300cf3e5c7199f03a56 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 4.4E-17 T 18-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CH53_3061 db05a17993c10300cf3e5c7199f03a56 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 4.4E-17 T 18-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CH53_3061 db05a17993c10300cf3e5c7199f03a56 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 4.4E-17 T 18-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CH53_3061 db05a17993c10300cf3e5c7199f03a56 403 SUPERFAMILY SSF56601 9 292 1.41E-77 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CH53_3061 db05a17993c10300cf3e5c7199f03a56 403 Gene3D G3DSA:2.60.410.10 292 383 3.8E-27 T 18-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_3061 db05a17993c10300cf3e5c7199f03a56 403 SMART SM00936 292 383 3.2E-33 T 18-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_3061 db05a17993c10300cf3e5c7199f03a56 403 SUPERFAMILY SSF69189 292 385 1.14E-24 T 18-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_3061 db05a17993c10300cf3e5c7199f03a56 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 383 2.7E-24 T 18-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_3061 db05a17993c10300cf3e5c7199f03a56 403 Gene3D G3DSA:3.40.710.10 30 291 5.2E-89 T 18-10-2018 CH53_3061 db05a17993c10300cf3e5c7199f03a56 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 272 3.2E-98 T 18-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CH53_1605 29fbf28a20ce551907b1fe887cf6c8c8 498 Pfam PF01384 Phosphate transporter family 30 487 2.4E-88 T 18-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CH53_582 1670799e672148b84a0f4c71da0f6b94 235 Gene3D G3DSA:1.10.8.60 169 235 2.8E-27 T 18-10-2018 CH53_582 1670799e672148b84a0f4c71da0f6b94 235 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 8 233 5.7E-85 T 18-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 CH53_582 1670799e672148b84a0f4c71da0f6b94 235 Pfam PF00308 Bacterial dnaA protein 18 214 2.1E-17 T 18-10-2018 IPR013317 Chromosomal replication initiator protein DnaA CH53_582 1670799e672148b84a0f4c71da0f6b94 235 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 133 160 1.3E-6 T 18-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CH53_582 1670799e672148b84a0f4c71da0f6b94 235 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 45 65 1.3E-6 T 18-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CH53_582 1670799e672148b84a0f4c71da0f6b94 235 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 7 235 58.516 T 18-10-2018 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae CH53_582 1670799e672148b84a0f4c71da0f6b94 235 SUPERFAMILY SSF52540 34 213 5.02E-22 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_582 1670799e672148b84a0f4c71da0f6b94 235 Gene3D G3DSA:3.40.50.300 2 166 3.8E-35 T 18-10-2018 CH53_663 fffca9b6f52a4dccc8a3374f1570960c 540 Pfam PF00795 Carbon-nitrogen hydrolase 7 242 4.7E-25 T 18-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CH53_663 fffca9b6f52a4dccc8a3374f1570960c 540 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 5 537 28.139 T 18-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CH53_663 fffca9b6f52a4dccc8a3374f1570960c 540 Gene3D G3DSA:3.60.110.10 1 256 2.5E-87 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CH53_663 fffca9b6f52a4dccc8a3374f1570960c 540 Pfam PF02540 NAD synthase 264 511 6.1E-71 T 18-10-2018 IPR022310 NAD/GMP synthase CH53_663 fffca9b6f52a4dccc8a3374f1570960c 540 Gene3D G3DSA:3.40.50.620 261 539 2.0E-112 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_663 fffca9b6f52a4dccc8a3374f1570960c 540 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 37 52 - T 18-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 CH53_663 fffca9b6f52a4dccc8a3374f1570960c 540 PIRSF PIRSF006630 243 539 4.3E-120 T 18-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CH53_663 fffca9b6f52a4dccc8a3374f1570960c 540 PIRSF PIRSF006630 2 247 5.9E-81 T 18-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CH53_663 fffca9b6f52a4dccc8a3374f1570960c 540 SUPERFAMILY SSF56317 4 242 5.23E-60 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CH53_663 fffca9b6f52a4dccc8a3374f1570960c 540 TIGRFAM TIGR00552 nadE: NAD+ synthetase 265 511 7.1E-58 T 18-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 CH53_663 fffca9b6f52a4dccc8a3374f1570960c 540 SUPERFAMILY SSF52402 256 520 2.43E-77 T 18-10-2018 CH53_11 0717ba7c1abd26881c2c28889a4644df 176 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 3.9E-17 T 18-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CH53_3871 5a163334f4f9084aad93aa500088a737 892 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 18-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CH53_3871 5a163334f4f9084aad93aa500088a737 892 Pfam PF00171 Aldehyde dehydrogenase family 5 399 4.3E-27 T 18-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CH53_3871 5a163334f4f9084aad93aa500088a737 892 SUPERFAMILY SSF56796 451 864 2.22E-118 T 18-10-2018 CH53_3871 5a163334f4f9084aad93aa500088a737 892 Gene3D G3DSA:3.40.605.10 10 444 3.3E-181 T 18-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CH53_3871 5a163334f4f9084aad93aa500088a737 892 PIRSF PIRSF000111 1 866 0.0 T 18-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 CH53_3871 5a163334f4f9084aad93aa500088a737 892 SUPERFAMILY SSF53720 6 453 6.28E-83 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CH53_3871 5a163334f4f9084aad93aa500088a737 892 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 9.4E-114 T 18-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CH53_3871 5a163334f4f9084aad93aa500088a737 892 Gene3D G3DSA:1.20.1090.10 645 865 5.0E-61 T 18-10-2018 CH53_3871 5a163334f4f9084aad93aa500088a737 892 Gene3D G3DSA:3.40.309.10 218 404 3.3E-181 T 18-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CH53_3871 5a163334f4f9084aad93aa500088a737 892 Gene3D G3DSA:3.40.50.1970 450 643 3.6E-58 T 18-10-2018 CH53_3871 5a163334f4f9084aad93aa500088a737 892 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 18-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CH53_3514 8b15da3cbb05781e1d31f157b2f5669a 267 Gene3D G3DSA:2.60.40.10 171 267 4.8E-15 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_3514 8b15da3cbb05781e1d31f157b2f5669a 267 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 192 259 5.5E-14 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_3514 8b15da3cbb05781e1d31f157b2f5669a 267 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 120 137 - T 18-10-2018 IPR018046 Pili assembly chaperone, conserved site CH53_3514 8b15da3cbb05781e1d31f157b2f5669a 267 PRINTS PR00969 Pili chaperone signature 148 163 3.9E-30 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3514 8b15da3cbb05781e1d31f157b2f5669a 267 PRINTS PR00969 Pili chaperone signature 40 49 3.9E-30 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3514 8b15da3cbb05781e1d31f157b2f5669a 267 PRINTS PR00969 Pili chaperone signature 187 202 3.9E-30 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3514 8b15da3cbb05781e1d31f157b2f5669a 267 PRINTS PR00969 Pili chaperone signature 91 112 3.9E-30 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3514 8b15da3cbb05781e1d31f157b2f5669a 267 PRINTS PR00969 Pili chaperone signature 121 138 3.9E-30 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3514 8b15da3cbb05781e1d31f157b2f5669a 267 SUPERFAMILY SSF49354 34 166 7.06E-38 T 18-10-2018 IPR008962 PapD-like superfamily CH53_3514 8b15da3cbb05781e1d31f157b2f5669a 267 SUPERFAMILY SSF49584 160 262 1.31E-12 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_3514 8b15da3cbb05781e1d31f157b2f5669a 267 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 39 166 6.9E-40 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_3514 8b15da3cbb05781e1d31f157b2f5669a 267 Gene3D G3DSA:2.60.40.10 39 166 3.0E-39 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2399 90918055c1afd57e4e6b2d779d1a9f17 341 Pfam PF01497 Periplasmic binding protein 68 315 6.4E-27 T 18-10-2018 IPR002491 ABC transporter periplasmic binding domain CH53_2399 90918055c1afd57e4e6b2d779d1a9f17 341 SUPERFAMILY SSF53807 45 339 3.92E-47 T 18-10-2018 CH53_2399 90918055c1afd57e4e6b2d779d1a9f17 341 Gene3D G3DSA:3.40.50.1980 47 164 9.3E-31 T 18-10-2018 CH53_2399 90918055c1afd57e4e6b2d779d1a9f17 341 Gene3D G3DSA:3.40.50.1980 165 341 7.2E-65 T 18-10-2018 CH53_2553 f7a7b722d72171083565635aaf7aea31 453 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 315 451 4.3E-49 T 18-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain CH53_2553 f7a7b722d72171083565635aaf7aea31 453 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 80 287 1.7E-56 T 18-10-2018 IPR017732 Type IV / VI secretion system, DotU CH53_2553 f7a7b722d72171083565635aaf7aea31 453 Gene3D G3DSA:3.30.1330.60 303 452 6.6E-41 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_2553 f7a7b722d72171083565635aaf7aea31 453 Pfam PF00691 OmpA family 347 445 3.3E-16 T 18-10-2018 IPR006665 OmpA-like domain CH53_2553 f7a7b722d72171083565635aaf7aea31 453 Gene3D G3DSA:1.25.40.590 77 235 5.5E-42 T 18-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily CH53_2553 f7a7b722d72171083565635aaf7aea31 453 Pfam PF09850 Type VI secretion system protein DotU 80 283 4.2E-47 T 18-10-2018 IPR017732 Type IV / VI secretion system, DotU CH53_2553 f7a7b722d72171083565635aaf7aea31 453 SUPERFAMILY SSF103088 339 451 7.46E-28 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_1189 991ae0ce231dc3a46d9082813b6c495b 182 Pfam PF13302 Acetyltransferase (GNAT) domain 10 150 4.6E-21 T 18-10-2018 IPR000182 GNAT domain CH53_1189 991ae0ce231dc3a46d9082813b6c495b 182 Gene3D G3DSA:3.40.630.30 4 182 8.7E-25 T 18-10-2018 CH53_1189 991ae0ce231dc3a46d9082813b6c495b 182 SUPERFAMILY SSF55729 1 159 4.49E-26 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_964 d5d87df61bb68b60e58e4c15c31e33ad 665 Gene3D G3DSA:1.10.3470.10 345 665 6.5E-78 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_964 d5d87df61bb68b60e58e4c15c31e33ad 665 SUPERFAMILY SSF81345 15 330 1.96E-59 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_964 d5d87df61bb68b60e58e4c15c31e33ad 665 SUPERFAMILY SSF81345 351 662 5.75E-70 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_964 d5d87df61bb68b60e58e4c15c31e33ad 665 Gene3D G3DSA:1.10.3470.10 12 334 3.4E-69 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_964 d5d87df61bb68b60e58e4c15c31e33ad 665 Pfam PF01032 FecCD transport family 20 328 1.4E-66 T 18-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CH53_964 d5d87df61bb68b60e58e4c15c31e33ad 665 Pfam PF01032 FecCD transport family 364 662 1.4E-72 T 18-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CH53_2793 275de35696cfe3ec1640f571cb3dc7e1 308 Pfam PF02424 ApbE family 1 277 6.4E-84 T 18-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 CH53_2793 275de35696cfe3ec1640f571cb3dc7e1 308 Gene3D G3DSA:3.10.520.20 1 307 1.5E-109 T 18-10-2018 CH53_2793 275de35696cfe3ec1640f571cb3dc7e1 308 SUPERFAMILY SSF143631 1 304 4.18E-101 T 18-10-2018 IPR003374 ApbE-like superfamily CH53_2793 275de35696cfe3ec1640f571cb3dc7e1 308 PIRSF PIRSF006268 1 306 7.5E-89 T 18-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 CH53_1578 de047772b5dc40526034eded25ca59ab 428 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 18-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CH53_1578 de047772b5dc40526034eded25ca59ab 428 SUPERFAMILY SSF53448 19 392 8.11E-79 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_1578 de047772b5dc40526034eded25ca59ab 428 Pfam PF00483 Nucleotidyl transferase 22 291 2.5E-68 T 18-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CH53_1578 de047772b5dc40526034eded25ca59ab 428 Gene3D G3DSA:3.90.550.10 1 300 3.8E-95 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_1578 de047772b5dc40526034eded25ca59ab 428 Gene3D G3DSA:2.160.10.10 301 428 1.2E-40 T 18-10-2018 CH53_1578 de047772b5dc40526034eded25ca59ab 428 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 18-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CH53_1578 de047772b5dc40526034eded25ca59ab 428 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 1.1E-157 T 18-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CH53_1578 de047772b5dc40526034eded25ca59ab 428 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 18-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CH53_1578 de047772b5dc40526034eded25ca59ab 428 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 53.394 T 18-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CH53_1578 de047772b5dc40526034eded25ca59ab 428 SUPERFAMILY SSF51161 313 412 2.36E-19 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily CH53_1251 a06923df9789e1678c0705d5eae24a92 708 Gene3D G3DSA:3.20.70.20 117 683 4.7E-231 T 18-10-2018 CH53_1251 a06923df9789e1678c0705d5eae24a92 708 SUPERFAMILY SSF51998 117 683 1.04E-192 T 18-10-2018 CH53_1251 a06923df9789e1678c0705d5eae24a92 708 Pfam PF03477 ATP cone domain 1 85 2.7E-18 T 18-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CH53_1251 a06923df9789e1678c0705d5eae24a92 708 ProSitePatterns PS00850 Glycine radical domain signature. 672 680 - T 18-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CH53_1251 a06923df9789e1678c0705d5eae24a92 708 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 111 701 1.8E-204 T 18-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 CH53_1251 a06923df9789e1678c0705d5eae24a92 708 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 112 701 2.3E-180 T 18-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 CH53_2693 1842322f8bb966bb48f38b3e67d3bc5d 963 Gene3D G3DSA:3.30.830.10 654 919 7.4E-130 T 18-10-2018 CH53_2693 1842322f8bb966bb48f38b3e67d3bc5d 963 SUPERFAMILY SSF63411 747 956 5.41E-44 T 18-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CH53_2693 1842322f8bb966bb48f38b3e67d3bc5d 963 SUPERFAMILY SSF63411 267 504 2.27E-67 T 18-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CH53_2693 1842322f8bb966bb48f38b3e67d3bc5d 963 Gene3D G3DSA:3.30.830.10 275 504 4.2E-69 T 18-10-2018 CH53_2693 1842322f8bb966bb48f38b3e67d3bc5d 963 Pfam PF05193 Peptidase M16 inactive domain 684 859 3.7E-10 T 18-10-2018 IPR007863 Peptidase M16, C-terminal CH53_2693 1842322f8bb966bb48f38b3e67d3bc5d 963 Pfam PF05193 Peptidase M16 inactive domain 218 394 1.1E-19 T 18-10-2018 IPR007863 Peptidase M16, C-terminal CH53_2693 1842322f8bb966bb48f38b3e67d3bc5d 963 SUPERFAMILY SSF63411 36 263 1.49E-51 T 18-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CH53_2693 1842322f8bb966bb48f38b3e67d3bc5d 963 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 77 100 - T 18-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CH53_2693 1842322f8bb966bb48f38b3e67d3bc5d 963 Gene3D G3DSA:3.30.830.10 506 887 7.4E-130 T 18-10-2018 CH53_2693 1842322f8bb966bb48f38b3e67d3bc5d 963 SUPERFAMILY SSF63411 506 732 4.05E-46 T 18-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CH53_2693 1842322f8bb966bb48f38b3e67d3bc5d 963 Pfam PF16187 Middle or third domain of peptidase_M16 402 676 7.4E-58 T 18-10-2018 IPR032632 Peptidase M16, middle/third domain CH53_2693 1842322f8bb966bb48f38b3e67d3bc5d 963 Gene3D G3DSA:3.30.830.10 27 273 5.4E-78 T 18-10-2018 CH53_2693 1842322f8bb966bb48f38b3e67d3bc5d 963 Pfam PF00675 Insulinase (Peptidase family M16) 57 193 8.2E-33 T 18-10-2018 IPR011765 Peptidase M16, N-terminal CH53_701 3ed6f42b906d85e03e05b067f92f0dfa 160 Pfam PF01668 SmpB protein 14 157 9.4E-59 T 18-10-2018 IPR000037 SsrA-binding protein GO:0003723 CH53_701 3ed6f42b906d85e03e05b067f92f0dfa 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 18-10-2018 IPR020081 SsrA-binding protein, conserved site CH53_701 3ed6f42b906d85e03e05b067f92f0dfa 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 4.0E-55 T 18-10-2018 IPR000037 SsrA-binding protein GO:0003723 CH53_701 3ed6f42b906d85e03e05b067f92f0dfa 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 122 1.0E-56 T 18-10-2018 IPR000037 SsrA-binding protein GO:0003723 CH53_701 3ed6f42b906d85e03e05b067f92f0dfa 160 Gene3D G3DSA:2.40.280.10 7 134 1.4E-47 T 18-10-2018 IPR023620 Small protein B CH53_701 3ed6f42b906d85e03e05b067f92f0dfa 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 74.873 T 18-10-2018 IPR000037 SsrA-binding protein GO:0003723 CH53_701 3ed6f42b906d85e03e05b067f92f0dfa 160 SUPERFAMILY SSF74982 8 138 1.96E-51 T 18-10-2018 IPR023620 Small protein B CH53_3817 d01cac85a4d2658c790a87685197bd34 232 Gene3D G3DSA:3.30.420.40 96 190 1.4E-83 T 18-10-2018 CH53_3817 d01cac85a4d2658c790a87685197bd34 232 SUPERFAMILY SSF53067 5 107 3.93E-30 T 18-10-2018 CH53_3817 d01cac85a4d2658c790a87685197bd34 232 Gene3D G3DSA:3.30.420.40 5 224 1.4E-83 T 18-10-2018 CH53_3817 d01cac85a4d2658c790a87685197bd34 232 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 1.9E-68 T 18-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 CH53_3817 d01cac85a4d2658c790a87685197bd34 232 SUPERFAMILY SSF53067 110 219 5.7E-28 T 18-10-2018 CH53_3817 d01cac85a4d2658c790a87685197bd34 232 Pfam PF00814 Glycoprotease family 30 134 7.8E-29 T 18-10-2018 IPR000905 Gcp-like domain CH53_4324 ec92613984a30357f6ae2f5a7bdc7ac8 932 SUPERFAMILY SSF55874 346 544 6.21E-20 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_4324 ec92613984a30357f6ae2f5a7bdc7ac8 932 Gene3D G3DSA:3.30.565.10 338 572 6.9E-34 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_4324 ec92613984a30357f6ae2f5a7bdc7ac8 932 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 369 504 6.1E-9 T 18-10-2018 CH53_1706 c0dfce9d2ba3c9a7f478174a6ba67b4e 417 SUPERFAMILY SSF53383 24 409 4.81E-61 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_1706 c0dfce9d2ba3c9a7f478174a6ba67b4e 417 Pfam PF00155 Aminotransferase class I and II 67 392 5.8E-22 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_1706 c0dfce9d2ba3c9a7f478174a6ba67b4e 417 Gene3D G3DSA:3.40.640.10 1 414 1.0E-146 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_3422 7e7a1ecf588054447e58ee7e8a5251fd 985 Pfam PF06744 Type VI secretion protein IcmF C-terminal 714 911 1.1E-51 T 18-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal CH53_3422 7e7a1ecf588054447e58ee7e8a5251fd 985 Pfam PF06761 Intracellular multiplication and human macrophage-killing 270 583 3.0E-70 T 18-10-2018 IPR009612 ImcF-related CH53_1161 868d20e9b7b52959f416999787759f28 359 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 301 9.7E-44 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_3626 8501b7272040392c7d8169f985ffae8b 340 SUPERFAMILY SSF56349 62 325 2.24E-48 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CH53_3626 8501b7272040392c7d8169f985ffae8b 340 Gene3D G3DSA:1.10.150.130 62 161 1.2E-12 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal CH53_3626 8501b7272040392c7d8169f985ffae8b 340 Pfam PF00589 Phage integrase family 165 325 2.1E-9 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CH53_3626 8501b7272040392c7d8169f985ffae8b 340 Gene3D G3DSA:1.10.443.10 163 329 5.4E-19 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CH53_1714 a070dfa1d44a5ca5599eb54a6db7e95f 205 SUPERFAMILY SSF51569 3 203 5.13E-52 T 18-10-2018 CH53_1714 a070dfa1d44a5ca5599eb54a6db7e95f 205 Pfam PF01081 KDPG and KHG aldolase 7 180 5.9E-25 T 18-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CH53_1714 a070dfa1d44a5ca5599eb54a6db7e95f 205 Gene3D G3DSA:3.20.20.70 1 205 3.1E-61 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3604 630a6fbcdf1a6228ac5ca029db30af40 160 Pfam PF13239 2TM domain 82 157 2.5E-10 T 18-10-2018 IPR025698 2TM domain CH53_3604 630a6fbcdf1a6228ac5ca029db30af40 160 SUPERFAMILY SSF47413 5 62 3.22E-14 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_3604 630a6fbcdf1a6228ac5ca029db30af40 160 SMART SM00530 5 59 2.5E-14 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_3604 630a6fbcdf1a6228ac5ca029db30af40 160 Pfam PF01381 Helix-turn-helix 6 59 1.4E-13 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_3604 630a6fbcdf1a6228ac5ca029db30af40 160 Gene3D G3DSA:1.10.260.40 3 68 4.1E-16 T 18-10-2018 CH53_533 fa175126fcfad18cd9a90e9a3be56a0e 221 SUPERFAMILY SSF52540 2 212 2.77E-36 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_533 fa175126fcfad18cd9a90e9a3be56a0e 221 Pfam PF00005 ABC transporter 22 153 3.6E-14 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_533 fa175126fcfad18cd9a90e9a3be56a0e 221 ProSitePatterns PS00211 ABC transporters family signature. 125 139 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_533 fa175126fcfad18cd9a90e9a3be56a0e 221 Gene3D G3DSA:3.40.50.300 1 219 2.2E-37 T 18-10-2018 CH53_533 fa175126fcfad18cd9a90e9a3be56a0e 221 SMART SM00382 30 209 9.5E-7 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1390 be74bd29fc068d78ebffd6ef4201b678 764 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 15 764 0.0 T 18-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CH53_1390 be74bd29fc068d78ebffd6ef4201b678 764 Pfam PF02901 Pyruvate formate lyase-like 27 618 1.3E-194 T 18-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CH53_1390 be74bd29fc068d78ebffd6ef4201b678 764 SUPERFAMILY SSF51998 10 763 1.26E-277 T 18-10-2018 CH53_1390 be74bd29fc068d78ebffd6ef4201b678 764 Pfam PF01228 Glycine radical 634 745 6.3E-41 T 18-10-2018 IPR001150 Glycine radical domain GO:0003824 CH53_1390 be74bd29fc068d78ebffd6ef4201b678 764 PIRSF PIRSF000379 12 764 0.0 T 18-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CH53_1390 be74bd29fc068d78ebffd6ef4201b678 764 Gene3D G3DSA:3.20.70.20 7 764 0.0 T 18-10-2018 CH53_1390 be74bd29fc068d78ebffd6ef4201b678 764 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 18-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CH53_3059 ad6235f215148d9c7dedbec2b2fd70b2 224 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 2.0E-22 T 18-10-2018 CH53_3059 ad6235f215148d9c7dedbec2b2fd70b2 224 Pfam PF03099 Biotin/lipoate A/B protein ligase family 63 159 1.7E-6 T 18-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CH53_3059 ad6235f215148d9c7dedbec2b2fd70b2 224 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 36.758 T 18-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CH53_3059 ad6235f215148d9c7dedbec2b2fd70b2 224 PIRSF PIRSF016262 1 217 2.8E-57 T 18-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CH53_3059 ad6235f215148d9c7dedbec2b2fd70b2 224 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 18-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CH53_3059 ad6235f215148d9c7dedbec2b2fd70b2 224 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 30 203 1.8E-71 T 18-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CH53_3059 ad6235f215148d9c7dedbec2b2fd70b2 224 SUPERFAMILY SSF55681 4 205 5.55E-68 T 18-10-2018 CH53_3059 ad6235f215148d9c7dedbec2b2fd70b2 224 Gene3D G3DSA:3.30.930.10 2 204 6.7E-61 T 18-10-2018 CH53_3992 31448f4e13ad4b732d1e22cf73853b79 151 SUPERFAMILY SSF46785 6 61 5.62E-16 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3992 31448f4e13ad4b732d1e22cf73853b79 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 54 4.3E-16 T 18-10-2018 CH53_3992 31448f4e13ad4b732d1e22cf73853b79 151 Pfam PF01037 Lrp/AsnC ligand binding domain 81 131 3.5E-11 T 18-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CH53_3992 31448f4e13ad4b732d1e22cf73853b79 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 7.0E-15 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_3992 31448f4e13ad4b732d1e22cf73853b79 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 7.0E-15 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_3992 31448f4e13ad4b732d1e22cf73853b79 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 7.0E-15 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_3992 31448f4e13ad4b732d1e22cf73853b79 151 SUPERFAMILY SSF54909 73 150 7.11E-13 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_3992 31448f4e13ad4b732d1e22cf73853b79 151 Gene3D G3DSA:3.30.70.920 62 142 8.9E-13 T 18-10-2018 CH53_3992 31448f4e13ad4b732d1e22cf73853b79 151 Gene3D G3DSA:1.10.10.10 1 61 2.8E-23 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3992 31448f4e13ad4b732d1e22cf73853b79 151 SMART SM00344 7 115 7.7E-25 T 18-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CH53_3018 09a6a2ba5f47a7fbe37a3dd8ee9b2058 279 SUPERFAMILY SSF56281 9 274 1.57E-47 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_3018 09a6a2ba5f47a7fbe37a3dd8ee9b2058 279 SMART SM00849 54 256 5.8E-25 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_3018 09a6a2ba5f47a7fbe37a3dd8ee9b2058 279 Gene3D G3DSA:3.60.15.10 5 278 1.2E-76 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_3018 09a6a2ba5f47a7fbe37a3dd8ee9b2058 279 Pfam PF00753 Metallo-beta-lactamase superfamily 53 245 2.8E-26 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_2791 966ce74f6d203c3fc50d8818da73558e 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.608 T 18-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CH53_2791 966ce74f6d203c3fc50d8818da73558e 198 PIRSF PIRSF006102 1 198 4.9E-65 T 18-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CH53_2791 966ce74f6d203c3fc50d8818da73558e 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 1.3E-104 T 18-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CH53_2791 966ce74f6d203c3fc50d8818da73558e 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 4.2E-59 T 18-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CH53_4377 368a178f5fd08a438773a5e3ad95e211 572 Gene3D G3DSA:3.40.50.300 329 572 8.3E-92 T 18-10-2018 CH53_4377 368a178f5fd08a438773a5e3ad95e211 572 Pfam PF00005 ABC transporter 350 498 9.4E-35 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_4377 368a178f5fd08a438773a5e3ad95e211 572 SUPERFAMILY SSF52540 322 569 3.0E-91 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4377 368a178f5fd08a438773a5e3ad95e211 572 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_4377 368a178f5fd08a438773a5e3ad95e211 572 SUPERFAMILY SSF90123 3 319 8.5E-73 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_4377 368a178f5fd08a438773a5e3ad95e211 572 Pfam PF00664 ABC transporter transmembrane region 20 287 2.1E-49 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CH53_4377 368a178f5fd08a438773a5e3ad95e211 572 SMART SM00382 358 544 6.7E-18 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_4377 368a178f5fd08a438773a5e3ad95e211 572 Gene3D G3DSA:1.20.1560.10 1 315 1.2E-73 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_796 cfc21c394f81d9845c2f8ed3949d032d 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 18-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_796 cfc21c394f81d9845c2f8ed3949d032d 325 SMART SM00363 18 83 1.9E-10 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_796 cfc21c394f81d9845c2f8ed3949d032d 325 Pfam PF01479 S4 domain 18 65 4.3E-11 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_796 cfc21c394f81d9845c2f8ed3949d032d 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 313 5.6E-107 T 18-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_796 cfc21c394f81d9845c2f8ed3949d032d 325 Gene3D G3DSA:3.30.2350.10 85 316 5.6E-71 T 18-10-2018 CH53_796 cfc21c394f81d9845c2f8ed3949d032d 325 SUPERFAMILY SSF55174 17 69 3.53E-11 T 18-10-2018 CH53_796 cfc21c394f81d9845c2f8ed3949d032d 325 SUPERFAMILY SSF55120 77 321 4.52E-79 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_796 cfc21c394f81d9845c2f8ed3949d032d 325 Gene3D G3DSA:3.10.290.10 2 76 1.7E-25 T 18-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CH53_796 cfc21c394f81d9845c2f8ed3949d032d 325 Pfam PF00849 RNA pseudouridylate synthase 92 242 8.4E-32 T 18-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_841 4812586c75922e0d67b65d00c897b0a6 215 SUPERFAMILY SSF53639 2 212 2.16E-64 T 18-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CH53_841 4812586c75922e0d67b65d00c897b0a6 215 SMART SM01007 8 182 1.7E-64 T 18-10-2018 IPR001303 Class II aldolase/adducin N-terminal CH53_841 4812586c75922e0d67b65d00c897b0a6 215 Gene3D G3DSA:3.40.225.10 1 215 4.2E-80 T 18-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CH53_841 4812586c75922e0d67b65d00c897b0a6 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 180 2.0E-47 T 18-10-2018 IPR001303 Class II aldolase/adducin N-terminal CH53_841 4812586c75922e0d67b65d00c897b0a6 215 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 1 215 56.209 T 18-10-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 CH53_155 47d21787d4b916973ef4a053df02f3e4 230 SUPERFAMILY SSF52540 6 224 3.22E-48 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_155 47d21787d4b916973ef4a053df02f3e4 230 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 2.2E-92 T 18-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CH53_155 47d21787d4b916973ef4a053df02f3e4 230 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 33.93 T 18-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CH53_155 47d21787d4b916973ef4a053df02f3e4 230 Gene3D G3DSA:3.40.50.300 1 230 4.7E-87 T 18-10-2018 CH53_155 47d21787d4b916973ef4a053df02f3e4 230 Pfam PF02224 Cytidylate kinase 8 221 1.8E-81 T 18-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CH53_226 0f4f89feb5aacac6359ae2027903dc32 663 SUPERFAMILY SSF56935 29 663 8.98E-125 T 18-10-2018 CH53_226 0f4f89feb5aacac6359ae2027903dc32 663 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 45 - T 18-10-2018 IPR010916 TonB box, conserved site CH53_226 0f4f89feb5aacac6359ae2027903dc32 663 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 161 4.8E-28 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain CH53_226 0f4f89feb5aacac6359ae2027903dc32 663 Gene3D G3DSA:2.40.170.20 172 663 8.8E-139 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH53_226 0f4f89feb5aacac6359ae2027903dc32 663 Pfam PF00593 TonB dependent receptor 234 661 1.3E-57 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CH53_226 0f4f89feb5aacac6359ae2027903dc32 663 Gene3D G3DSA:2.170.130.10 34 166 3.3E-40 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CH53_3822 a3327d76e1f9f32757ba43a158083d32 270 Gene3D G3DSA:3.40.50.300 1 260 6.3E-76 T 18-10-2018 CH53_3822 a3327d76e1f9f32757ba43a158083d32 270 SUPERFAMILY SSF52540 1 268 2.34E-53 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3822 a3327d76e1f9f32757ba43a158083d32 270 PIRSF PIRSF003092 1 270 3.7E-98 T 18-10-2018 IPR025501 ATP binding protein MinD CH53_3822 a3327d76e1f9f32757ba43a158083d32 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 3.1E-111 T 18-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 CH53_3822 a3327d76e1f9f32757ba43a158083d32 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 3.9E-20 T 18-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CH53_733 7d060d736283ddd774043147c2e55fd2 268 Gene3D G3DSA:3.40.50.300 11 263 2.5E-52 T 18-10-2018 CH53_733 7d060d736283ddd774043147c2e55fd2 268 Pfam PF00005 ABC transporter 26 175 3.1E-19 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_733 7d060d736283ddd774043147c2e55fd2 268 SMART SM00382 35 222 8.0E-7 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_733 7d060d736283ddd774043147c2e55fd2 268 SUPERFAMILY SSF52540 23 237 8.5E-45 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2678 9f8e7fadb02c47a7f0e5b7cc1982690a 718 Gene3D G3DSA:3.40.50.12780 193 614 3.2E-75 T 18-10-2018 CH53_2678 9f8e7fadb02c47a7f0e5b7cc1982690a 718 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 717 57.433 T 18-10-2018 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 CH53_2678 9f8e7fadb02c47a7f0e5b7cc1982690a 718 SMART SM00563 30 140 1.7E-23 T 18-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CH53_2678 9f8e7fadb02c47a7f0e5b7cc1982690a 718 Pfam PF01553 Acyltransferase 25 136 3.6E-14 T 18-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CH53_2678 9f8e7fadb02c47a7f0e5b7cc1982690a 718 Gene3D G3DSA:3.30.300.30 616 716 4.6E-9 T 18-10-2018 CH53_2678 9f8e7fadb02c47a7f0e5b7cc1982690a 718 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 18-10-2018 IPR020845 AMP-binding, conserved site CH53_2678 9f8e7fadb02c47a7f0e5b7cc1982690a 718 SUPERFAMILY SSF56801 210 713 8.9E-96 T 18-10-2018 CH53_2678 9f8e7fadb02c47a7f0e5b7cc1982690a 718 Pfam PF00501 AMP-binding enzyme 231 619 3.0E-65 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CH53_2678 9f8e7fadb02c47a7f0e5b7cc1982690a 718 SUPERFAMILY SSF69593 10 167 4.32E-18 T 18-10-2018 CH53_2586 b0ad8067f126b894ab361fd847ff895e 273 SUPERFAMILY SSF48179 163 271 4.42E-29 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_2586 b0ad8067f126b894ab361fd847ff895e 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 247 - T 18-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CH53_2586 b0ad8067f126b894ab361fd847ff895e 273 SUPERFAMILY SSF51735 4 161 3.06E-37 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2586 b0ad8067f126b894ab361fd847ff895e 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 24.9 T 18-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CH53_2586 b0ad8067f126b894ab361fd847ff895e 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 100 2.8E-18 T 18-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CH53_2586 b0ad8067f126b894ab361fd847ff895e 273 Gene3D G3DSA:1.10.3730.10 166 273 4.4E-34 T 18-10-2018 CH53_2586 b0ad8067f126b894ab361fd847ff895e 273 PIRSF PIRSF000193 3 271 1.4E-75 T 18-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CH53_2586 b0ad8067f126b894ab361fd847ff895e 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 5.0E-72 T 18-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CH53_2586 b0ad8067f126b894ab361fd847ff895e 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 2.1E-29 T 18-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CH53_2586 b0ad8067f126b894ab361fd847ff895e 273 Gene3D G3DSA:3.40.50.720 2 165 1.5E-49 T 18-10-2018 CH53_4426 04953295afc0e9fe5d598a81e16acbb9 206 SUPERFAMILY SSF52540 1 79 2.74E-14 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4426 04953295afc0e9fe5d598a81e16acbb9 206 Pfam PF13177 DNA polymerase III, delta subunit 1 34 9.2E-9 T 18-10-2018 CH53_4426 04953295afc0e9fe5d598a81e16acbb9 206 Gene3D G3DSA:1.20.272.10 81 202 7.2E-41 T 18-10-2018 CH53_4426 04953295afc0e9fe5d598a81e16acbb9 206 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 80 195 7.5E-41 T 18-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_4426 04953295afc0e9fe5d598a81e16acbb9 206 SUPERFAMILY SSF48019 82 202 7.48E-36 T 18-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CH53_4426 04953295afc0e9fe5d598a81e16acbb9 206 Gene3D G3DSA:3.40.50.300 1 35 3.5E-10 T 18-10-2018 CH53_1733 f4f70a0baa9103219a81402a6c8ec9df 108 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 12.977 T 18-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CH53_1733 f4f70a0baa9103219a81402a6c8ec9df 108 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 103 1.6E-34 T 18-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CH53_1733 f4f70a0baa9103219a81402a6c8ec9df 108 Pfam PF00825 Ribonuclease P 1 100 6.5E-30 T 18-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CH53_1733 f4f70a0baa9103219a81402a6c8ec9df 108 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 6 87 9.0E-42 T 18-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CH53_1733 f4f70a0baa9103219a81402a6c8ec9df 108 SUPERFAMILY SSF54211 1 103 1.21E-29 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_1733 f4f70a0baa9103219a81402a6c8ec9df 108 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 45 59 - T 18-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 CH53_1733 f4f70a0baa9103219a81402a6c8ec9df 108 Gene3D G3DSA:3.30.230.10 1 108 1.2E-40 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH53_4393 2d8a8e74f231fad263c269f4257ff111 519 Pfam PF08447 PAS fold 31 114 2.0E-13 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 CH53_4393 2d8a8e74f231fad263c269f4257ff111 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 1.4E-40 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_4393 2d8a8e74f231fad263c269f4257ff111 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 1.4E-40 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_4393 2d8a8e74f231fad263c269f4257ff111 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 1.4E-40 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_4393 2d8a8e74f231fad263c269f4257ff111 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 1.4E-40 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_4393 2d8a8e74f231fad263c269f4257ff111 519 Gene3D G3DSA:3.30.450.20 20 146 3.0E-22 T 18-10-2018 CH53_4393 2d8a8e74f231fad263c269f4257ff111 519 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 8.5E-51 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_4393 2d8a8e74f231fad263c269f4257ff111 519 SUPERFAMILY SSF55785 23 114 1.24E-23 T 18-10-2018 IPR035965 PAS domain superfamily CH53_4393 2d8a8e74f231fad263c269f4257ff111 519 Gene3D G3DSA:1.10.287.950 216 517 2.9E-78 T 18-10-2018 CH53_4393 2d8a8e74f231fad263c269f4257ff111 519 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 114 5.5E-10 T 18-10-2018 IPR000014 PAS domain CH53_4393 2d8a8e74f231fad263c269f4257ff111 519 SMART SM00086 80 121 4.7E-4 T 18-10-2018 IPR001610 PAC motif CH53_4393 2d8a8e74f231fad263c269f4257ff111 519 SUPERFAMILY SSF58104 242 515 4.32E-66 T 18-10-2018 CH53_4393 2d8a8e74f231fad263c269f4257ff111 519 SMART SM00283 269 516 7.3E-77 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_3745 6a4d3b164a6685a2ad95d23f3eba505e 494 SUPERFAMILY SSF52540 4 231 3.47E-55 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3745 6a4d3b164a6685a2ad95d23f3eba505e 494 SUPERFAMILY SSF52540 268 482 2.91E-48 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3745 6a4d3b164a6685a2ad95d23f3eba505e 494 Gene3D G3DSA:3.40.50.300 259 493 4.8E-46 T 18-10-2018 CH53_3745 6a4d3b164a6685a2ad95d23f3eba505e 494 Pfam PF00005 ABC transporter 270 424 1.2E-22 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3745 6a4d3b164a6685a2ad95d23f3eba505e 494 Gene3D G3DSA:3.40.50.300 2 249 1.7E-52 T 18-10-2018 CH53_3745 6a4d3b164a6685a2ad95d23f3eba505e 494 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3745 6a4d3b164a6685a2ad95d23f3eba505e 494 SMART SM00382 30 219 8.5E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3745 6a4d3b164a6685a2ad95d23f3eba505e 494 SMART SM00382 278 473 1.3E-5 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3745 6a4d3b164a6685a2ad95d23f3eba505e 494 Pfam PF00005 ABC transporter 21 170 3.5E-29 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1099 a7d70bc8508e3317ae14dfc292ca8761 555 SUPERFAMILY SSF52540 11 243 1.02E-48 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1099 a7d70bc8508e3317ae14dfc292ca8761 555 SUPERFAMILY SSF52540 303 528 6.66E-47 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1099 a7d70bc8508e3317ae14dfc292ca8761 555 SMART SM00382 31 236 1.2E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1099 a7d70bc8508e3317ae14dfc292ca8761 555 SMART SM00382 348 522 2.5E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1099 a7d70bc8508e3317ae14dfc292ca8761 555 Pfam PF12848 ABC transporter 230 306 1.4E-11 T 18-10-2018 IPR032781 ABC-transporter extension domain CH53_1099 a7d70bc8508e3317ae14dfc292ca8761 555 Gene3D G3DSA:3.40.50.300 286 555 4.8E-77 T 18-10-2018 CH53_1099 a7d70bc8508e3317ae14dfc292ca8761 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1099 a7d70bc8508e3317ae14dfc292ca8761 555 Pfam PF00005 ABC transporter 22 191 3.6E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1099 a7d70bc8508e3317ae14dfc292ca8761 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 2.6E-294 T 18-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 CH53_1099 a7d70bc8508e3317ae14dfc292ca8761 555 Pfam PF00005 ABC transporter 340 473 6.3E-23 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1099 a7d70bc8508e3317ae14dfc292ca8761 555 Gene3D G3DSA:3.40.50.300 1 285 1.1E-87 T 18-10-2018 CH53_2826 0a96af66962eb2141f4b0f37ab6ad240 614 Pfam PF00128 Alpha amylase, catalytic domain 179 495 4.0E-74 T 18-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CH53_2826 0a96af66962eb2141f4b0f37ab6ad240 614 PIRSF PIRSF036918 1 610 2.2E-237 T 18-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 CH53_2826 0a96af66962eb2141f4b0f37ab6ad240 614 Gene3D G3DSA:2.60.40.1180 527 610 5.0E-7 T 18-10-2018 IPR013780 Glycosyl hydrolase, all-beta CH53_2826 0a96af66962eb2141f4b0f37ab6ad240 614 SUPERFAMILY SSF51445 119 532 4.56E-92 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_2826 0a96af66962eb2141f4b0f37ab6ad240 614 SMART SM00642 129 523 1.2E-81 T 18-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CH53_2826 0a96af66962eb2141f4b0f37ab6ad240 614 Gene3D G3DSA:3.20.20.80 118 525 1.4E-127 T 18-10-2018 CH53_2826 0a96af66962eb2141f4b0f37ab6ad240 614 SUPERFAMILY SSF51011 532 612 4.38E-12 T 18-10-2018 CH53_741 473fabc470669d1c8de0262e2c38ae98 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 18-10-2018 IPR019844 Cold-shock conserved site CH53_741 473fabc470669d1c8de0262e2c38ae98 70 PIRSF PIRSF002599 1 70 2.9E-24 T 18-10-2018 IPR012156 Cold shock, CspA GO:0003676 CH53_741 473fabc470669d1c8de0262e2c38ae98 70 PRINTS PR00050 Cold shock protein signature 43 61 6.3E-18 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_741 473fabc470669d1c8de0262e2c38ae98 70 PRINTS PR00050 Cold shock protein signature 7 22 6.3E-18 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_741 473fabc470669d1c8de0262e2c38ae98 70 PRINTS PR00050 Cold shock protein signature 28 37 6.3E-18 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_741 473fabc470669d1c8de0262e2c38ae98 70 SMART SM00357 6 70 1.1E-30 T 18-10-2018 IPR011129 Cold shock domain GO:0003676 CH53_741 473fabc470669d1c8de0262e2c38ae98 70 SUPERFAMILY SSF50249 3 69 2.57E-25 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_741 473fabc470669d1c8de0262e2c38ae98 70 Gene3D G3DSA:2.40.50.140 2 69 5.7E-29 T 18-10-2018 CH53_741 473fabc470669d1c8de0262e2c38ae98 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 4.9E-32 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_2363 548e2abe4b201049e2b50f3c63f546c2 475 Gene3D G3DSA:2.60.40.420 29 165 1.2E-31 T 18-10-2018 IPR008972 Cupredoxin CH53_2363 548e2abe4b201049e2b50f3c63f546c2 475 SUPERFAMILY SSF49503 315 466 6.3E-19 T 18-10-2018 IPR008972 Cupredoxin CH53_2363 548e2abe4b201049e2b50f3c63f546c2 475 SUPERFAMILY SSF49503 3 166 5.04E-25 T 18-10-2018 IPR008972 Cupredoxin CH53_2363 548e2abe4b201049e2b50f3c63f546c2 475 Pfam PF07731 Multicopper oxidase 358 469 8.0E-15 T 18-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CH53_2363 548e2abe4b201049e2b50f3c63f546c2 475 Pfam PF07732 Multicopper oxidase 53 167 2.0E-26 T 18-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 CH53_2363 548e2abe4b201049e2b50f3c63f546c2 475 SUPERFAMILY SSF49503 173 295 1.49E-30 T 18-10-2018 IPR008972 Cupredoxin CH53_2363 548e2abe4b201049e2b50f3c63f546c2 475 Gene3D G3DSA:2.60.40.420 347 473 4.3E-26 T 18-10-2018 IPR008972 Cupredoxin CH53_2363 548e2abe4b201049e2b50f3c63f546c2 475 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 469 57.921 T 18-10-2018 IPR026589 Cell division protein FtsP GO:0043093 CH53_2363 548e2abe4b201049e2b50f3c63f546c2 475 Gene3D G3DSA:2.60.40.420 166 346 3.6E-54 T 18-10-2018 IPR008972 Cupredoxin CH53_2696 6f0686f4cc9c86dfb0fe760474b3057b 441 SUPERFAMILY SSF53633 4 290 3.77E-70 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CH53_2696 6f0686f4cc9c86dfb0fe760474b3057b 441 Pfam PF00583 Acetyltransferase (GNAT) family 335 412 8.8E-8 T 18-10-2018 IPR000182 GNAT domain CH53_2696 6f0686f4cc9c86dfb0fe760474b3057b 441 SUPERFAMILY SSF55729 236 417 2.44E-19 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_2696 6f0686f4cc9c86dfb0fe760474b3057b 441 Pfam PF00696 Amino acid kinase family 25 266 1.1E-31 T 18-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CH53_2696 6f0686f4cc9c86dfb0fe760474b3057b 441 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 240.322 T 18-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CH53_2696 6f0686f4cc9c86dfb0fe760474b3057b 441 Gene3D G3DSA:3.40.1160.10 7 292 7.9E-86 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CH53_2696 6f0686f4cc9c86dfb0fe760474b3057b 441 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 440 3.8E-202 T 18-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CH53_2696 6f0686f4cc9c86dfb0fe760474b3057b 441 Gene3D G3DSA:3.40.630.30 293 441 1.1E-38 T 18-10-2018 CH53_2696 6f0686f4cc9c86dfb0fe760474b3057b 441 PIRSF PIRSF000423 1 441 2.0E-211 T 18-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CH53_2550 d41e044f6ac6062b1e643b834bf2410f 161 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 145 3.3E-21 T 18-10-2018 IPR008514 Type VI secretion system effector, Hcp CH53_2550 d41e044f6ac6062b1e643b834bf2410f 161 SUPERFAMILY SSF141452 2 159 2.75E-52 T 18-10-2018 IPR036624 Hcp1-like superfamily CH53_2550 d41e044f6ac6062b1e643b834bf2410f 161 Pfam PF05638 Type VI secretion system effector, Hcp 6 136 8.8E-41 T 18-10-2018 IPR008514 Type VI secretion system effector, Hcp CH53_2550 d41e044f6ac6062b1e643b834bf2410f 161 Gene3D G3DSA:2.30.110.20 4 161 2.9E-66 T 18-10-2018 IPR036624 Hcp1-like superfamily CH53_3574 4cad948250e9d76c515b7d0f08e4c53d 572 PRINTS PR01009 Flagellar M-ring protein signature 268 286 5.1E-43 T 18-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CH53_3574 4cad948250e9d76c515b7d0f08e4c53d 572 PRINTS PR01009 Flagellar M-ring protein signature 199 217 5.1E-43 T 18-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CH53_3574 4cad948250e9d76c515b7d0f08e4c53d 572 PRINTS PR01009 Flagellar M-ring protein signature 377 401 5.1E-43 T 18-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CH53_3574 4cad948250e9d76c515b7d0f08e4c53d 572 PRINTS PR01009 Flagellar M-ring protein signature 124 142 5.1E-43 T 18-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CH53_3574 4cad948250e9d76c515b7d0f08e4c53d 572 PRINTS PR01009 Flagellar M-ring protein signature 156 170 5.1E-43 T 18-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CH53_3574 4cad948250e9d76c515b7d0f08e4c53d 572 PIRSF PIRSF004862 8 572 1.4E-161 T 18-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CH53_3574 4cad948250e9d76c515b7d0f08e4c53d 572 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 18 571 2.2E-169 T 18-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CH53_3574 4cad948250e9d76c515b7d0f08e4c53d 572 Pfam PF08345 Flagellar M-ring protein C-terminal 255 449 2.2E-48 T 18-10-2018 IPR013556 Flagellar M-ring C-terminal CH53_3574 4cad948250e9d76c515b7d0f08e4c53d 572 Gene3D G3DSA:3.30.300.30 125 226 3.3E-10 T 18-10-2018 CH53_3574 4cad948250e9d76c515b7d0f08e4c53d 572 Pfam PF01514 Secretory protein of YscJ/FliF family 34 223 2.7E-74 T 18-10-2018 IPR006182 Secretory protein YscJ/FliF CH53_4388 b1c44d3f88c0e4a99fca1e4d8f660a1e 285 Pfam PF05368 NmrA-like family 2 220 7.4E-22 T 18-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 CH53_4388 b1c44d3f88c0e4a99fca1e4d8f660a1e 285 Gene3D G3DSA:3.40.50.720 3 267 3.1E-90 T 18-10-2018 CH53_4388 b1c44d3f88c0e4a99fca1e4d8f660a1e 285 Gene3D G3DSA:3.90.25.10 137 269 3.1E-90 T 18-10-2018 CH53_4388 b1c44d3f88c0e4a99fca1e4d8f660a1e 285 SUPERFAMILY SSF51735 2 244 2.26E-61 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3271 ad682c0f84f224b88a3225153d08b87a 506 Pfam PF00005 ABC transporter 280 434 5.8E-17 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3271 ad682c0f84f224b88a3225153d08b87a 506 Gene3D G3DSA:3.40.50.300 2 253 1.5E-58 T 18-10-2018 CH53_3271 ad682c0f84f224b88a3225153d08b87a 506 SUPERFAMILY SSF52540 12 236 6.49E-57 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3271 ad682c0f84f224b88a3225153d08b87a 506 Gene3D G3DSA:3.40.50.300 263 501 2.8E-37 T 18-10-2018 CH53_3271 ad682c0f84f224b88a3225153d08b87a 506 SUPERFAMILY SSF52540 254 494 1.16E-40 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3271 ad682c0f84f224b88a3225153d08b87a 506 Pfam PF00005 ABC transporter 29 178 1.2E-29 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3271 ad682c0f84f224b88a3225153d08b87a 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3271 ad682c0f84f224b88a3225153d08b87a 506 SMART SM00382 288 483 2.3 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3271 ad682c0f84f224b88a3225153d08b87a 506 SMART SM00382 38 233 9.2E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3409 af3634dd44fa4ad6067d7be2f67dc56f 445 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 442 1.0E-131 T 18-10-2018 IPR010263 Type VI secretion protein, VC_A0114 CH53_3409 af3634dd44fa4ad6067d7be2f67dc56f 445 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 2.6E-123 T 18-10-2018 IPR010263 Type VI secretion protein, VC_A0114 CH53_3676 5a4a252c0783e48af325e27148cfba25 148 ProSitePatterns PS01117 MarR-type HTH domain signature. 73 108 - T 18-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CH53_3676 5a4a252c0783e48af325e27148cfba25 148 SUPERFAMILY SSF46785 11 145 4.17E-24 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3676 5a4a252c0783e48af325e27148cfba25 148 Pfam PF12802 MarR family 41 98 6.5E-8 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CH53_3676 5a4a252c0783e48af325e27148cfba25 148 Gene3D G3DSA:1.10.10.10 2 148 4.3E-19 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3676 5a4a252c0783e48af325e27148cfba25 148 SMART SM00347 35 135 4.2E-10 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CH53_1775 d743bef4d838c087eea3971985d9f65e 274 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 274 15.942 T 18-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1775 d743bef4d838c087eea3971985d9f65e 274 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 42 269 1.7E-43 T 18-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1775 d743bef4d838c087eea3971985d9f65e 274 Gene3D G3DSA:1.20.120.220 98 274 1.4E-69 T 18-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1775 d743bef4d838c087eea3971985d9f65e 274 PRINTS PR00123 ATP synthase A subunit signature 107 123 3.7E-15 T 18-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1775 d743bef4d838c087eea3971985d9f65e 274 PRINTS PR00123 ATP synthase A subunit signature 254 269 3.7E-15 T 18-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1775 d743bef4d838c087eea3971985d9f65e 274 PRINTS PR00123 ATP synthase A subunit signature 206 228 3.7E-15 T 18-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1775 d743bef4d838c087eea3971985d9f65e 274 Pfam PF00119 ATP synthase A chain 51 268 3.5E-54 T 18-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1775 d743bef4d838c087eea3971985d9f65e 274 ProSitePatterns PS00449 ATP synthase a subunit signature. 209 218 - T 18-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1775 d743bef4d838c087eea3971985d9f65e 274 SUPERFAMILY SSF81336 98 268 1.96E-48 T 18-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1052 e5783fe9b6b7f32c8712af63711b2883 968 Pfam PF00176 SNF2 family N-terminal domain 174 442 9.2E-20 T 18-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CH53_1052 e5783fe9b6b7f32c8712af63711b2883 968 Gene3D G3DSA:3.40.50.10810 150 428 6.5E-109 T 18-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily CH53_1052 e5783fe9b6b7f32c8712af63711b2883 968 Pfam PF00271 Helicase conserved C-terminal domain 492 601 4.0E-14 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_1052 e5783fe9b6b7f32c8712af63711b2883 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 3.9E-154 T 18-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 CH53_1052 e5783fe9b6b7f32c8712af63711b2883 968 SMART SM00490 517 601 4.9E-15 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_1052 e5783fe9b6b7f32c8712af63711b2883 968 Gene3D G3DSA:3.30.360.80 713 786 3.2E-32 T 18-10-2018 CH53_1052 e5783fe9b6b7f32c8712af63711b2883 968 SUPERFAMILY SSF52540 273 644 3.55E-42 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1052 e5783fe9b6b7f32c8712af63711b2883 968 Gene3D G3DSA:3.40.50.300 429 633 2.8E-47 T 18-10-2018 CH53_1052 e5783fe9b6b7f32c8712af63711b2883 968 Gene3D G3DSA:2.30.30.930 55 114 5.8E-29 T 18-10-2018 CH53_1052 e5783fe9b6b7f32c8712af63711b2883 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 28.918 T 18-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 CH53_1052 e5783fe9b6b7f32c8712af63711b2883 968 Gene3D G3DSA:2.30.30.140 1 53 3.4E-23 T 18-10-2018 CH53_1052 e5783fe9b6b7f32c8712af63711b2883 968 SUPERFAMILY SSF52540 125 377 3.51E-39 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1052 e5783fe9b6b7f32c8712af63711b2883 968 SMART SM00487 150 342 4.2E-21 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH53_2411 7421345426f08000fd3fa3a07eb62b2c 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 18-10-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CH53_2411 7421345426f08000fd3fa3a07eb62b2c 113 Gene3D G3DSA:3.30.2320.80 1 113 2.9E-30 T 18-10-2018 CH53_2411 7421345426f08000fd3fa3a07eb62b2c 113 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 20.896 T 18-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 CH53_2411 7421345426f08000fd3fa3a07eb62b2c 113 PIRSF PIRSF004761 1 113 4.0E-37 T 18-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 CH53_2411 7421345426f08000fd3fa3a07eb62b2c 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 8.5E-38 T 18-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 CH53_2411 7421345426f08000fd3fa3a07eb62b2c 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 1.9E-31 T 18-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 CH53_899 1904dadc1107c2232aa7efe0eb4d0923 182 Gene3D G3DSA:2.60.40.1090 60 182 2.2E-36 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_899 1904dadc1107c2232aa7efe0eb4d0923 182 SUPERFAMILY SSF49401 58 182 4.47E-25 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_899 1904dadc1107c2232aa7efe0eb4d0923 182 Pfam PF00419 Fimbrial protein 50 182 8.7E-15 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_3463 9240869aef841d4faa2d4b4adba55051 449 Pfam PF02954 Bacterial regulatory protein, Fis family 409 448 3.6E-13 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_3463 9240869aef841d4faa2d4b4adba55051 449 SUPERFAMILY SSF46689 357 448 2.78E-13 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3463 9240869aef841d4faa2d4b4adba55051 449 Gene3D G3DSA:1.10.10.60 403 447 3.6E-15 T 18-10-2018 CH53_3463 9240869aef841d4faa2d4b4adba55051 449 Gene3D G3DSA:1.10.8.60 315 393 1.4E-29 T 18-10-2018 CH53_3463 9240869aef841d4faa2d4b4adba55051 449 Pfam PF00072 Response regulator receiver domain 8 114 6.8E-28 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3463 9240869aef841d4faa2d4b4adba55051 449 SUPERFAMILY SSF52540 143 387 9.06E-73 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3463 9240869aef841d4faa2d4b4adba55051 449 Gene3D G3DSA:3.40.50.300 142 314 4.3E-61 T 18-10-2018 CH53_3463 9240869aef841d4faa2d4b4adba55051 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 18-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH53_3463 9240869aef841d4faa2d4b4adba55051 449 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 5.2E-8 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_3463 9240869aef841d4faa2d4b4adba55051 449 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 415 432 5.2E-8 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_3463 9240869aef841d4faa2d4b4adba55051 449 SMART SM00382 164 307 5.4E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3463 9240869aef841d4faa2d4b4adba55051 449 Gene3D G3DSA:3.40.50.2300 1 140 4.6E-41 T 18-10-2018 CH53_3463 9240869aef841d4faa2d4b4adba55051 449 SUPERFAMILY SSF52172 4 188 3.56E-48 T 18-10-2018 IPR011006 CheY-like superfamily CH53_3463 9240869aef841d4faa2d4b4adba55051 449 Pfam PF00158 Sigma-54 interaction domain 144 310 2.9E-70 T 18-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CH53_3463 9240869aef841d4faa2d4b4adba55051 449 SMART SM00448 6 117 1.2E-36 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3463 9240869aef841d4faa2d4b4adba55051 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 18-10-2018 IPR025944 Sigma-54 interaction domain, conserved site CH53_2437 2a9fb5dbd088df3beb10738365402afb 587 Pfam PF06276 Ferric iron reductase FhuF-like transporter 405 560 5.8E-26 T 18-10-2018 IPR022770 Ferric iron reductase FhuF domain CH53_2437 2a9fb5dbd088df3beb10738365402afb 587 Pfam PF04183 IucA / IucC family 142 366 3.8E-53 T 18-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 CH53_2437 2a9fb5dbd088df3beb10738365402afb 587 Gene3D G3DSA:1.10.510.40 371 531 9.8E-9 T 18-10-2018 CH53_952 59ca6ce9d775aa052c050ad78a3afd25 744 SUPERFAMILY SSF109604 27 207 4.08E-45 T 18-10-2018 CH53_952 59ca6ce9d775aa052c050ad78a3afd25 744 Pfam PF13328 HD domain 46 191 2.6E-41 T 18-10-2018 IPR003607 HD/PDEase domain CH53_952 59ca6ce9d775aa052c050ad78a3afd25 744 Gene3D G3DSA:1.10.3210.10 34 207 8.6E-39 T 18-10-2018 CH53_952 59ca6ce9d775aa052c050ad78a3afd25 744 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 739 7.5E-188 T 18-10-2018 IPR004811 RelA/SpoT family GO:0015969 CH53_952 59ca6ce9d775aa052c050ad78a3afd25 744 Gene3D G3DSA:3.10.20.30 399 472 3.1E-33 T 18-10-2018 IPR012675 Beta-grasp domain superfamily CH53_952 59ca6ce9d775aa052c050ad78a3afd25 744 Gene3D G3DSA:3.30.460.10 209 341 4.5E-50 T 18-10-2018 CH53_952 59ca6ce9d775aa052c050ad78a3afd25 744 Pfam PF02824 TGS domain 405 464 2.1E-21 T 18-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CH53_952 59ca6ce9d775aa052c050ad78a3afd25 744 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 2.3E-36 T 18-10-2018 IPR007685 RelA/SpoT GO:0015969 CH53_952 59ca6ce9d775aa052c050ad78a3afd25 744 Pfam PF13291 ACT domain 664 740 1.7E-17 T 18-10-2018 IPR002912 ACT domain CH53_952 59ca6ce9d775aa052c050ad78a3afd25 744 SUPERFAMILY SSF55021 665 741 1.49E-13 T 18-10-2018 CH53_952 59ca6ce9d775aa052c050ad78a3afd25 744 SMART SM00954 251 361 3.5E-66 T 18-10-2018 IPR007685 RelA/SpoT GO:0015969 CH53_952 59ca6ce9d775aa052c050ad78a3afd25 744 Gene3D G3DSA:3.30.70.260 663 743 4.9E-18 T 18-10-2018 CH53_952 59ca6ce9d775aa052c050ad78a3afd25 744 SUPERFAMILY SSF81301 196 409 1.8E-64 T 18-10-2018 CH53_952 59ca6ce9d775aa052c050ad78a3afd25 744 SUPERFAMILY SSF81271 398 464 2.62E-22 T 18-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CH53_3956 f52979e505ba5e04709586b34a4285cc 536 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 467 484 - T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_3956 f52979e505ba5e04709586b34a4285cc 536 Gene3D G3DSA:3.30.1360.60 452 531 2.8E-26 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_3956 f52979e505ba5e04709586b34a4285cc 536 SUPERFAMILY SSF55604 457 528 9.68E-21 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_3956 f52979e505ba5e04709586b34a4285cc 536 Pfam PF02378 Phosphotransferase system, EIIC 19 361 7.2E-84 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_3956 f52979e505ba5e04709586b34a4285cc 536 Pfam PF00367 phosphotransferase system, EIIB 458 489 1.1E-14 T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_3956 f52979e505ba5e04709586b34a4285cc 536 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 8 527 2.6E-258 T 18-10-2018 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 KEGG: 00500+2.7.1.208 CH53_3956 f52979e505ba5e04709586b34a4285cc 536 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 421 514 4.5E-23 T 18-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CH53_451 2fb3f3023fa85df2af5c50d9ca3cba48 208 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_451 2fb3f3023fa85df2af5c50d9ca3cba48 208 SMART SM00382 26 207 7.1E-5 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_451 2fb3f3023fa85df2af5c50d9ca3cba48 208 SUPERFAMILY SSF52540 2 188 3.35E-41 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_451 2fb3f3023fa85df2af5c50d9ca3cba48 208 Gene3D G3DSA:3.40.50.300 1 205 2.3E-42 T 18-10-2018 CH53_451 2fb3f3023fa85df2af5c50d9ca3cba48 208 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 201 2.0E-79 T 18-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 CH53_451 2fb3f3023fa85df2af5c50d9ca3cba48 208 Pfam PF00005 ABC transporter 18 157 4.0E-29 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2036 0ae7e2f29cb8cc48da99404be8711433 255 SMART SM00382 31 231 2.6E-7 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2036 0ae7e2f29cb8cc48da99404be8711433 255 SUPERFAMILY SSF52540 5 253 5.22E-64 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2036 0ae7e2f29cb8cc48da99404be8711433 255 Gene3D G3DSA:3.40.50.300 5 253 7.0E-63 T 18-10-2018 CH53_2036 0ae7e2f29cb8cc48da99404be8711433 255 Pfam PF00005 ABC transporter 23 182 6.6E-33 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2036 0ae7e2f29cb8cc48da99404be8711433 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 234 254 1.6E-11 T 18-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CH53_2036 0ae7e2f29cb8cc48da99404be8711433 255 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3054 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PIRSF PIRSF002599 1 69 7.1E-26 T 18-10-2018 IPR012156 Cold shock, CspA GO:0003676 CH53_3054 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 Gene3D G3DSA:2.40.50.140 1 67 8.1E-32 T 18-10-2018 CH53_3054 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 SUPERFAMILY SSF50249 3 68 9.14E-26 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_3054 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PRINTS PR00050 Cold shock protein signature 27 36 1.4E-18 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_3054 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PRINTS PR00050 Cold shock protein signature 6 21 1.4E-18 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_3054 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PRINTS PR00050 Cold shock protein signature 42 60 1.4E-18 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_3054 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 2.6E-33 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_3054 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 SMART SM00357 5 69 6.9E-33 T 18-10-2018 IPR011129 Cold shock domain GO:0003676 CH53_3054 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 18-10-2018 IPR019844 Cold-shock conserved site CH53_219 bca0e7af05f4b283fc1c92cbcb1c5a24 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 51 205 1.7E-19 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_219 bca0e7af05f4b283fc1c92cbcb1c5a24 223 Gene3D G3DSA:1.10.3720.10 8 221 6.4E-48 T 18-10-2018 IPR035906 MetI-like superfamily CH53_219 bca0e7af05f4b283fc1c92cbcb1c5a24 223 SUPERFAMILY SSF161098 15 205 4.58E-43 T 18-10-2018 IPR035906 MetI-like superfamily CH53_287 23dd281427de3aa98d50c0e3dbcdfe32 99 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 9 88 1.8E-14 T 18-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative CH53_1281 8a1dd549e4f934150cdac4c7132a5caa 150 Pfam PF02576 RimP N-terminal domain 11 82 2.0E-28 T 18-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CH53_1281 8a1dd549e4f934150cdac4c7132a5caa 150 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 150 24.064 T 18-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 CH53_1281 8a1dd549e4f934150cdac4c7132a5caa 150 Pfam PF17384 RimP C-terminal SH3 domain 85 150 1.6E-22 T 18-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CH53_1281 8a1dd549e4f934150cdac4c7132a5caa 150 SUPERFAMILY SSF74942 83 150 1.22E-16 T 18-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CH53_1281 8a1dd549e4f934150cdac4c7132a5caa 150 Gene3D G3DSA:3.30.300.70 1 79 6.2E-25 T 18-10-2018 IPR035956 RimP, N-terminal domain superfamily CH53_1281 8a1dd549e4f934150cdac4c7132a5caa 150 SUPERFAMILY SSF75420 3 82 1.7E-24 T 18-10-2018 IPR035956 RimP, N-terminal domain superfamily CH53_311 8235bf7edb0331e47a4d4103702a704e 463 Pfam PF13941 MutL protein 4 456 8.8E-123 T 18-10-2018 IPR006230 Protein MutL CH53_311 8235bf7edb0331e47a4d4103702a704e 463 PIRSF PIRSF004729 1 463 4.9E-169 T 18-10-2018 IPR006230 Protein MutL CH53_311 8235bf7edb0331e47a4d4103702a704e 463 TIGRFAM TIGR01319 glmL_fam: conserved hypothetical protein 6 461 6.2E-196 T 18-10-2018 IPR006230 Protein MutL CH53_931 9d081ff506d63eb10d58f774e3d6f202 106 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.018 T 18-10-2018 IPR023081 Cell division protein FtsB CH53_931 9d081ff506d63eb10d58f774e3d6f202 106 Pfam PF04977 Septum formation initiator 11 89 1.3E-28 T 18-10-2018 IPR007060 Septum formation initiator FtsL/DivIC CH53_931 9d081ff506d63eb10d58f774e3d6f202 106 Gene3D G3DSA:1.20.5.400 21 63 3.8E-14 T 18-10-2018 CH53_177 e3d368c59ecf8cd7dfb115ef91d19b1d 85 SMART SM00357 3 67 2.4E-28 T 18-10-2018 IPR011129 Cold shock domain GO:0003676 CH53_177 e3d368c59ecf8cd7dfb115ef91d19b1d 85 PIRSF PIRSF002599 1 80 2.4E-23 T 18-10-2018 IPR012156 Cold shock, CspA GO:0003676 CH53_177 e3d368c59ecf8cd7dfb115ef91d19b1d 85 SUPERFAMILY SSF50249 1 66 6.61E-23 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_177 e3d368c59ecf8cd7dfb115ef91d19b1d 85 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 1.6E-28 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_177 e3d368c59ecf8cd7dfb115ef91d19b1d 85 Gene3D G3DSA:2.40.50.140 2 65 3.8E-26 T 18-10-2018 CH53_177 e3d368c59ecf8cd7dfb115ef91d19b1d 85 PRINTS PR00050 Cold shock protein signature 4 19 1.2E-15 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_177 e3d368c59ecf8cd7dfb115ef91d19b1d 85 PRINTS PR00050 Cold shock protein signature 25 34 1.2E-15 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_177 e3d368c59ecf8cd7dfb115ef91d19b1d 85 PRINTS PR00050 Cold shock protein signature 40 58 1.2E-15 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_177 e3d368c59ecf8cd7dfb115ef91d19b1d 85 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 18-10-2018 IPR019844 Cold-shock conserved site CH53_177 e3d368c59ecf8cd7dfb115ef91d19b1d 85 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 66 2.1E-41 T 18-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 CH53_1879 5268c4ac34d3b5a5f777c57bec6f2172 354 SUPERFAMILY SSF53155 185 263 5.1E-19 T 18-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CH53_1879 5268c4ac34d3b5a5f777c57bec6f2172 354 Gene3D G3DSA:3.40.10.10 1 72 8.8E-32 T 18-10-2018 IPR035451 Ada-like domain superfamily CH53_1879 5268c4ac34d3b5a5f777c57bec6f2172 354 PIRSF PIRSF000409 1 353 2.6E-145 T 18-10-2018 IPR016221 Bifunctional regulatory protein Ada CH53_1879 5268c4ac34d3b5a5f777c57bec6f2172 354 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 316 322 - T 18-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CH53_1879 5268c4ac34d3b5a5f777c57bec6f2172 354 SUPERFAMILY SSF46689 82 128 7.17E-10 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1879 5268c4ac34d3b5a5f777c57bec6f2172 354 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 266 345 8.6E-36 T 18-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CH53_1879 5268c4ac34d3b5a5f777c57bec6f2172 354 Gene3D G3DSA:3.30.160.70 172 264 9.2E-31 T 18-10-2018 CH53_1879 5268c4ac34d3b5a5f777c57bec6f2172 354 Gene3D G3DSA:1.10.10.60 76 142 3.4E-24 T 18-10-2018 CH53_1879 5268c4ac34d3b5a5f777c57bec6f2172 354 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 267 346 3.5E-32 T 18-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CH53_1879 5268c4ac34d3b5a5f777c57bec6f2172 354 Pfam PF12833 Helix-turn-helix domain 102 178 2.7E-17 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_1879 5268c4ac34d3b5a5f777c57bec6f2172 354 Pfam PF02805 Metal binding domain of Ada 8 70 1.6E-32 T 18-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CH53_1879 5268c4ac34d3b5a5f777c57bec6f2172 354 Gene3D G3DSA:1.10.10.10 265 351 3.1E-35 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1879 5268c4ac34d3b5a5f777c57bec6f2172 354 SUPERFAMILY SSF46767 265 345 4.32E-30 T 18-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 CH53_1879 5268c4ac34d3b5a5f777c57bec6f2172 354 SUPERFAMILY SSF57884 4 88 6.54E-34 T 18-10-2018 IPR035451 Ada-like domain superfamily CH53_1879 5268c4ac34d3b5a5f777c57bec6f2172 354 SMART SM00342 96 178 2.3E-17 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_2558 521cb2402bfb40be424b124a4f5e8ecc 268 Pfam PF07024 ImpE protein 144 260 7.5E-41 T 18-10-2018 IPR009211 Predicted virulence protein, SciE type CH53_2558 521cb2402bfb40be424b124a4f5e8ecc 268 PIRSF PIRSF029288 1 268 2.1E-85 T 18-10-2018 IPR009211 Predicted virulence protein, SciE type CH53_2558 521cb2402bfb40be424b124a4f5e8ecc 268 Gene3D G3DSA:1.25.40.10 7 89 7.5E-13 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_2558 521cb2402bfb40be424b124a4f5e8ecc 268 SUPERFAMILY SSF144059 5 264 9.68E-79 T 18-10-2018 CH53_1325 0a784ffdf5113f66e902cce07d92495a 130 Gene3D G3DSA:3.30.70.60 1 92 8.1E-33 T 18-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CH53_1325 0a784ffdf5113f66e902cce07d92495a 130 SUPERFAMILY SSF54995 1 103 1.83E-37 T 18-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1325 0a784ffdf5113f66e902cce07d92495a 130 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 1.0E-37 T 18-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1325 0a784ffdf5113f66e902cce07d92495a 130 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.959 T 18-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CH53_1325 0a784ffdf5113f66e902cce07d92495a 130 Pfam PF01250 Ribosomal protein S6 3 91 9.4E-28 T 18-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1325 0a784ffdf5113f66e902cce07d92495a 130 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 18-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 CH53_2501 99b8d91d17c615590525dfa3ceb6f24d 440 Pfam PF02056 Family 4 glycosyl hydrolase 6 183 6.3E-66 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_2501 99b8d91d17c615590525dfa3ceb6f24d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 138 155 3.1E-59 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_2501 99b8d91d17c615590525dfa3ceb6f24d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 191 203 3.1E-59 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_2501 99b8d91d17c615590525dfa3ceb6f24d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 3.1E-59 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_2501 99b8d91d17c615590525dfa3ceb6f24d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 109 129 3.1E-59 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_2501 99b8d91d17c615590525dfa3ceb6f24d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 95 108 3.1E-59 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_2501 99b8d91d17c615590525dfa3ceb6f24d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 3.1E-59 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_2501 99b8d91d17c615590525dfa3ceb6f24d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 3.1E-59 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_2501 99b8d91d17c615590525dfa3ceb6f24d 440 Gene3D G3DSA:3.90.110.10 167 440 9.9E-104 T 18-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CH53_2501 99b8d91d17c615590525dfa3ceb6f24d 440 SUPERFAMILY SSF56327 168 439 1.13E-94 T 18-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CH53_2501 99b8d91d17c615590525dfa3ceb6f24d 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 195 415 4.6E-52 T 18-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CH53_2501 99b8d91d17c615590525dfa3ceb6f24d 440 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 138 169 - T 18-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CH53_2501 99b8d91d17c615590525dfa3ceb6f24d 440 SUPERFAMILY SSF51735 3 164 4.68E-53 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2501 99b8d91d17c615590525dfa3ceb6f24d 440 Gene3D G3DSA:3.40.50.720 1 166 6.5E-57 T 18-10-2018 CH53_1190 5e0e807d09ad78dc8a068f09d8ecd237 136 PIRSF PIRSF021320 1 136 2.7E-44 T 18-10-2018 IPR009326 Protein of unknown function DUF984 CH53_1190 5e0e807d09ad78dc8a068f09d8ecd237 136 Pfam PF04266 ASCH domain 26 134 8.9E-24 T 18-10-2018 IPR007374 ASCH domain CH53_1190 5e0e807d09ad78dc8a068f09d8ecd237 136 SMART SM01022 17 134 2.0E-42 T 18-10-2018 IPR007374 ASCH domain CH53_1190 5e0e807d09ad78dc8a068f09d8ecd237 136 SUPERFAMILY SSF88697 4 134 7.7E-45 T 18-10-2018 IPR015947 PUA-like superfamily CH53_1190 5e0e807d09ad78dc8a068f09d8ecd237 136 Gene3D G3DSA:3.10.400.10 2 136 3.6E-48 T 18-10-2018 CH53_1599 6283e512f883671921e1677b764cb93d 278 Gene3D G3DSA:3.20.20.150 1 278 5.9E-58 T 18-10-2018 CH53_1599 6283e512f883671921e1677b764cb93d 278 SUPERFAMILY SSF51658 4 277 4.83E-59 T 18-10-2018 IPR036237 Xylose isomerase-like superfamily CH53_1599 6283e512f883671921e1677b764cb93d 278 Pfam PF01261 Xylose isomerase-like TIM barrel 24 209 4.8E-13 T 18-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CH53_221 b401108f0c1d661e35da105fd2a005e6 274 Gene3D G3DSA:3.40.190.10 111 219 2.5E-86 T 18-10-2018 CH53_221 b401108f0c1d661e35da105fd2a005e6 274 Pfam PF03180 NLPA lipoprotein 32 269 3.9E-75 T 18-10-2018 IPR004872 Lipoprotein NlpA family CH53_221 b401108f0c1d661e35da105fd2a005e6 274 Gene3D G3DSA:3.40.190.10 32 267 2.5E-86 T 18-10-2018 CH53_221 b401108f0c1d661e35da105fd2a005e6 274 PIRSF PIRSF002854 1 271 2.9E-96 T 18-10-2018 IPR004872 Lipoprotein NlpA family CH53_221 b401108f0c1d661e35da105fd2a005e6 274 SUPERFAMILY SSF53850 32 270 2.71E-65 T 18-10-2018 CH53_3254 9810770874acf4d0bee94939623cdd52 412 SMART SM00852 183 320 5.3E-43 T 18-10-2018 IPR001453 MoaB/Mog domain CH53_3254 9810770874acf4d0bee94939623cdd52 412 SUPERFAMILY SSF63867 330 410 3.66E-24 T 18-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CH53_3254 9810770874acf4d0bee94939623cdd52 412 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 316 1.1E-32 T 18-10-2018 IPR001453 MoaB/Mog domain CH53_3254 9810770874acf4d0bee94939623cdd52 412 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 170 1.1E-43 T 18-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CH53_3254 9810770874acf4d0bee94939623cdd52 412 SUPERFAMILY SSF53218 180 325 4.32E-43 T 18-10-2018 IPR036425 MoaB/Mog-like domain superfamily CH53_3254 9810770874acf4d0bee94939623cdd52 412 Pfam PF03454 MoeA C-terminal region (domain IV) 335 406 8.9E-19 T 18-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CH53_3254 9810770874acf4d0bee94939623cdd52 412 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 289 - T 18-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CH53_3254 9810770874acf4d0bee94939623cdd52 412 Pfam PF00994 Probable molybdopterin binding domain 183 319 1.4E-25 T 18-10-2018 IPR001453 MoaB/Mog domain CH53_3254 9810770874acf4d0bee94939623cdd52 412 Gene3D G3DSA:2.40.340.10 331 401 1.9E-144 T 18-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CH53_3254 9810770874acf4d0bee94939623cdd52 412 Gene3D G3DSA:2.170.190.11 53 144 1.9E-144 T 18-10-2018 CH53_3254 9810770874acf4d0bee94939623cdd52 412 SUPERFAMILY SSF63882 9 178 4.71E-54 T 18-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CH53_3254 9810770874acf4d0bee94939623cdd52 412 Gene3D G3DSA:3.40.980.10 28 330 1.9E-144 T 18-10-2018 IPR036425 MoaB/Mog-like domain superfamily CH53_3254 9810770874acf4d0bee94939623cdd52 412 Gene3D G3DSA:3.90.105.10 29 177 1.9E-144 T 18-10-2018 CH53_384 78902a8c8d0d84b9b587ca4ec10dfb90 404 Pfam PF00155 Aminotransferase class I and II 58 392 1.0E-45 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_384 78902a8c8d0d84b9b587ca4ec10dfb90 404 Gene3D G3DSA:3.40.640.10 53 294 3.7E-148 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_384 78902a8c8d0d84b9b587ca4ec10dfb90 404 SUPERFAMILY SSF53383 7 401 1.63E-95 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_384 78902a8c8d0d84b9b587ca4ec10dfb90 404 Gene3D G3DSA:3.90.1150.10 21 398 3.7E-148 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_3370 ace33e85a90efce5cd1d61bae4431b64 271 TIGRFAM TIGR00861 MIP: MIP family channel proteins 11 249 2.4E-66 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_3370 ace33e85a90efce5cd1d61bae4431b64 271 PRINTS PR00783 Major intrinsic protein family signature 46 70 5.1E-51 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_3370 ace33e85a90efce5cd1d61bae4431b64 271 PRINTS PR00783 Major intrinsic protein family signature 232 252 5.1E-51 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_3370 ace33e85a90efce5cd1d61bae4431b64 271 PRINTS PR00783 Major intrinsic protein family signature 182 204 5.1E-51 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_3370 ace33e85a90efce5cd1d61bae4431b64 271 PRINTS PR00783 Major intrinsic protein family signature 7 26 5.1E-51 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_3370 ace33e85a90efce5cd1d61bae4431b64 271 PRINTS PR00783 Major intrinsic protein family signature 83 102 5.1E-51 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_3370 ace33e85a90efce5cd1d61bae4431b64 271 PRINTS PR00783 Major intrinsic protein family signature 149 167 5.1E-51 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_3370 ace33e85a90efce5cd1d61bae4431b64 271 SUPERFAMILY SSF81338 6 254 5.1E-75 T 18-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CH53_3370 ace33e85a90efce5cd1d61bae4431b64 271 Gene3D G3DSA:1.20.1080.10 1 257 4.2E-98 T 18-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CH53_3370 ace33e85a90efce5cd1d61bae4431b64 271 ProSitePatterns PS00221 MIP family signature. 64 72 - T 18-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 CH53_3370 ace33e85a90efce5cd1d61bae4431b64 271 Pfam PF00230 Major intrinsic protein 6 249 3.8E-65 T 18-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CH53_268 3aff2d35c4455a26b6d503b784253014 94 SUPERFAMILY SSF50715 1 94 1.73E-29 T 18-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CH53_268 3aff2d35c4455a26b6d503b784253014 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 26.683 T 18-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CH53_268 3aff2d35c4455a26b6d503b784253014 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 8 94 5.0E-45 T 18-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CH53_268 3aff2d35c4455a26b6d503b784253014 94 Pfam PF01386 Ribosomal L25p family 4 91 8.3E-23 T 18-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CH53_268 3aff2d35c4455a26b6d503b784253014 94 Gene3D G3DSA:2.40.240.10 1 94 1.1E-32 T 18-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CH53_3424 9a8e58542c5c8e41a4b036e14129af88 587 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 583 1.3E-168 T 18-10-2018 IPR010272 Type VI secretion system, TssF-like CH53_3424 9a8e58542c5c8e41a4b036e14129af88 587 PIRSF PIRSF028304 1 586 2.4E-157 T 18-10-2018 IPR010272 Type VI secretion system, TssF-like CH53_3424 9a8e58542c5c8e41a4b036e14129af88 587 Pfam PF05947 Type VI secretion system, TssF 6 584 7.9E-187 T 18-10-2018 IPR010272 Type VI secretion system, TssF-like CH53_2068 ca4bc8c709aedd8f1eada3a9576086c4 498 SUPERFAMILY SSF50475 6 325 2.04E-127 T 18-10-2018 CH53_2068 ca4bc8c709aedd8f1eada3a9576086c4 498 SUPERFAMILY SSF143968 326 489 2.09E-68 T 18-10-2018 CH53_2068 ca4bc8c709aedd8f1eada3a9576086c4 498 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 4 490 73.714 T 18-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CH53_2068 ca4bc8c709aedd8f1eada3a9576086c4 498 Gene3D G3DSA:1.20.5.570 458 497 2.0E-19 T 18-10-2018 CH53_2068 ca4bc8c709aedd8f1eada3a9576086c4 498 Gene3D G3DSA:3.40.1670.10 340 457 3.9E-52 T 18-10-2018 CH53_2068 ca4bc8c709aedd8f1eada3a9576086c4 498 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 9 458 1.7E-186 T 18-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CH53_2068 ca4bc8c709aedd8f1eada3a9576086c4 498 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 14 434 5.3E-173 T 18-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CH53_474 fc6e72129db9fe2cb2ae93c4da5220bd 213 SUPERFAMILY SSF159594 39 208 1.33E-44 T 18-10-2018 CH53_474 fc6e72129db9fe2cb2ae93c4da5220bd 213 Gene3D G3DSA:3.40.50.10610 30 212 5.1E-55 T 18-10-2018 CH53_474 fc6e72129db9fe2cb2ae93c4da5220bd 213 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 41 201 1.6E-24 T 18-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CH53_2467 4a8585363c7b659a23c0865b242c0c92 199 Gene3D G3DSA:1.10.10.10 98 199 1.1E-8 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2467 4a8585363c7b659a23c0865b242c0c92 199 SUPERFAMILY SSF46894 132 196 8.16E-10 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_2467 4a8585363c7b659a23c0865b242c0c92 199 SMART SM00421 140 197 0.002 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2467 4a8585363c7b659a23c0865b242c0c92 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 194 1.8E-7 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_571 caec9413cd03efd4076885f6b3ee5749 663 Pfam PF05127 Helicase 195 341 2.0E-37 T 18-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 CH53_571 caec9413cd03efd4076885f6b3ee5749 663 Gene3D G3DSA:3.40.50.12320 191 331 1.8E-46 T 18-10-2018 CH53_571 caec9413cd03efd4076885f6b3ee5749 663 SUPERFAMILY SSF55729 356 521 1.77E-11 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_571 caec9413cd03efd4076885f6b3ee5749 663 Pfam PF08351 Domain of unknown function (DUF1726) 64 149 5.6E-6 T 18-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 CH53_571 caec9413cd03efd4076885f6b3ee5749 663 Pfam PF17176 tRNA-binding domain 544 662 5.2E-45 T 18-10-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain CH53_571 caec9413cd03efd4076885f6b3ee5749 663 Gene3D G3DSA:3.40.630.30 332 538 6.3E-70 T 18-10-2018 CH53_571 caec9413cd03efd4076885f6b3ee5749 663 Gene3D G3DSA:3.40.50.11040 3 190 9.7E-65 T 18-10-2018 CH53_571 caec9413cd03efd4076885f6b3ee5749 663 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 16 663 49.692 T 18-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 CH53_571 caec9413cd03efd4076885f6b3ee5749 663 Pfam PF13718 GNAT acetyltransferase 2 375 482 6.2E-12 T 18-10-2018 IPR000182 GNAT domain CH53_571 caec9413cd03efd4076885f6b3ee5749 663 Pfam PF13718 GNAT acetyltransferase 2 487 540 3.6E-7 T 18-10-2018 IPR000182 GNAT domain CH53_571 caec9413cd03efd4076885f6b3ee5749 663 SUPERFAMILY SSF52540 163 285 4.69E-11 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_571 caec9413cd03efd4076885f6b3ee5749 663 Gene3D G3DSA:1.20.120.890 539 663 3.3E-49 T 18-10-2018 IPR038321 TmcA, C-terminal domain superfamily CH53_4189 bea011a2c93822241d604f0191a01bb0 96 Gene3D G3DSA:3.30.50.20 19 92 5.9E-34 T 18-10-2018 CH53_4189 bea011a2c93822241d604f0191a01bb0 96 Pfam PF07102 Protein of unknown function (DUF1364) 3 91 1.1E-42 T 18-10-2018 IPR010774 Protein of unknown function DUF1364 CH53_1238 23efcd525b405ba70c68728d847cfd87 149 SUPERFAMILY SSF102400 1 143 9.15E-48 T 18-10-2018 IPR036768 DNA polymerase III subunit chi superfamily CH53_1238 23efcd525b405ba70c68728d847cfd87 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 3.3E-39 T 18-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CH53_1238 23efcd525b405ba70c68728d847cfd87 149 Gene3D G3DSA:3.40.50.10110 1 146 2.5E-51 T 18-10-2018 IPR036768 DNA polymerase III subunit chi superfamily CH53_4343 1762b07ea116a18e4595e587ca8a6543 118 Gene3D G3DSA:3.10.450.300 21 118 2.3E-39 T 18-10-2018 IPR038703 YebF/Cmi superfamily CH53_4343 1762b07ea116a18e4595e587ca8a6543 118 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 25 114 4.0E-40 T 18-10-2018 IPR025603 YebF/Colicin-M immunity protein CH53_4343 1762b07ea116a18e4595e587ca8a6543 118 Pfam PF13995 YebF-like protein 27 114 1.5E-40 T 18-10-2018 IPR025603 YebF/Colicin-M immunity protein CH53_4343 1762b07ea116a18e4595e587ca8a6543 118 Hamap MF_01435 Protein YebF [yebF]. 1 117 36.37 T 18-10-2018 IPR020236 Uncharacterised protein family YebF CH53_961 72da5ea459f71c8130f6a94f089a9fde 478 Gene3D G3DSA:1.10.3080.10 31 473 7.9E-153 T 18-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 CH53_961 72da5ea459f71c8130f6a94f089a9fde 478 Pfam PF00654 Voltage gated chloride channel 89 437 1.0E-89 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CH53_961 72da5ea459f71c8130f6a94f089a9fde 478 SUPERFAMILY SSF81340 23 454 8.5E-111 T 18-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 CH53_961 72da5ea459f71c8130f6a94f089a9fde 478 PRINTS PR00762 Chloride channel signature 102 119 5.5E-28 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CH53_961 72da5ea459f71c8130f6a94f089a9fde 478 PRINTS PR00762 Chloride channel signature 352 372 5.5E-28 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CH53_961 72da5ea459f71c8130f6a94f089a9fde 478 PRINTS PR00762 Chloride channel signature 387 403 5.5E-28 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CH53_961 72da5ea459f71c8130f6a94f089a9fde 478 PRINTS PR00762 Chloride channel signature 405 424 5.5E-28 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CH53_961 72da5ea459f71c8130f6a94f089a9fde 478 PRINTS PR00762 Chloride channel signature 183 202 5.5E-28 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CH53_3680 a77e21b6130fc9d50a8a87fe3072a937 339 Gene3D G3DSA:1.10.10.10 5 76 2.4E-10 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3680 a77e21b6130fc9d50a8a87fe3072a937 339 Gene3D G3DSA:3.30.420.40 99 201 5.9E-17 T 18-10-2018 CH53_3680 a77e21b6130fc9d50a8a87fe3072a937 339 SUPERFAMILY SSF53067 130 305 1.94E-7 T 18-10-2018 CH53_3680 a77e21b6130fc9d50a8a87fe3072a937 339 Gene3D G3DSA:3.30.420.40 202 246 5.9E-17 T 18-10-2018 CH53_3680 a77e21b6130fc9d50a8a87fe3072a937 339 SUPERFAMILY SSF53067 86 193 3.24E-12 T 18-10-2018 CH53_3680 a77e21b6130fc9d50a8a87fe3072a937 339 SUPERFAMILY SSF46785 12 79 1.61E-8 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3680 a77e21b6130fc9d50a8a87fe3072a937 339 Pfam PF00480 ROK family 115 238 1.3E-8 T 18-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CH53_714 ec3bee1df402e76cc67f673b7fe86be9 461 Gene3D G3DSA:3.20.20.80 3 459 1.3E-148 T 18-10-2018 CH53_714 ec3bee1df402e76cc67f673b7fe86be9 461 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 360 368 - T 18-10-2018 IPR018120 Glycoside hydrolase family 1, active site CH53_714 ec3bee1df402e76cc67f673b7fe86be9 461 Pfam PF00232 Glycosyl hydrolase family 1 2 459 1.4E-135 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_714 ec3bee1df402e76cc67f673b7fe86be9 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 384 395 1.1E-13 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_714 ec3bee1df402e76cc67f673b7fe86be9 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 405 422 1.1E-13 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_714 ec3bee1df402e76cc67f673b7fe86be9 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 1.1E-13 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_714 ec3bee1df402e76cc67f673b7fe86be9 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 429 441 1.1E-13 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_714 ec3bee1df402e76cc67f673b7fe86be9 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 1.1E-13 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_714 ec3bee1df402e76cc67f673b7fe86be9 461 SUPERFAMILY SSF51445 1 455 5.15E-156 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_3367 bf00b395a6797f719b4842eaecb88507 554 ProDom PD025428 SUBUNIT GLYCEROL DEHYDRATASE LARGE LYASE DHAB ALPHA DIOL B12-DEPENDENT METABOLISM 8 549 0.0 T 18-10-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0016836|GO:0031419 CH53_3367 bf00b395a6797f719b4842eaecb88507 554 PIRSF PIRSF018507 1 554 0.0 T 18-10-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0016836|GO:0031419 CH53_3367 bf00b395a6797f719b4842eaecb88507 554 Gene3D G3DSA:3.20.20.350 1 554 0.0 T 18-10-2018 IPR036999 Diol/glycerol dehydratase, large subunit superfamily GO:0016836|GO:0031419 CH53_3367 bf00b395a6797f719b4842eaecb88507 554 Pfam PF02286 Dehydratase large subunit 1 551 0.0 T 18-10-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0016836|GO:0031419 CH53_3367 bf00b395a6797f719b4842eaecb88507 554 SUPERFAMILY SSF51703 1 553 2.35E-289 T 18-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CH53_236 6a8236dffcb6919d0c4775d74c1652a7 382 Gene3D G3DSA:1.10.3820.10 7 188 4.9E-38 T 18-10-2018 IPR038266 NapC/NirT cytochrome c superfamily CH53_236 6a8236dffcb6919d0c4775d74c1652a7 382 PIRSF PIRSF000014 2 382 4.7E-142 T 18-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 CH53_236 6a8236dffcb6919d0c4775d74c1652a7 382 SUPERFAMILY SSF48695 13 186 5.19E-50 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily CH53_236 6a8236dffcb6919d0c4775d74c1652a7 382 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 11 182 1.2E-67 T 18-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal CH53_2413 475cbdb337c1ea60715ec54b2141b4bf 95 Gene3D G3DSA:2.40.50.970 1 79 4.5E-25 T 18-10-2018 IPR037254 HupF/HypC superfamily CH53_2413 475cbdb337c1ea60715ec54b2141b4bf 95 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 1.6E-26 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CH53_2413 475cbdb337c1ea60715ec54b2141b4bf 95 Pfam PF01455 HupF/HypC family 1 71 2.8E-26 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CH53_2413 475cbdb337c1ea60715ec54b2141b4bf 95 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 18-10-2018 IPR019812 Hydrogenase assembly chaperone, conserved site CH53_2413 475cbdb337c1ea60715ec54b2141b4bf 95 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 4.4E-22 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CH53_2413 475cbdb337c1ea60715ec54b2141b4bf 95 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 4.4E-22 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CH53_2413 475cbdb337c1ea60715ec54b2141b4bf 95 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 4.4E-22 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CH53_2413 475cbdb337c1ea60715ec54b2141b4bf 95 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 4.4E-22 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CH53_2413 475cbdb337c1ea60715ec54b2141b4bf 95 SUPERFAMILY SSF159127 1 84 8.11E-25 T 18-10-2018 IPR037254 HupF/HypC superfamily CH53_3800 4befca0dac3685e67c756068d75ea031 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 158 2.7E-80 T 18-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CH53_3800 4befca0dac3685e67c756068d75ea031 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.828 T 18-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CH53_3800 4befca0dac3685e67c756068d75ea031 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 6.6E-42 T 18-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CH53_3800 4befca0dac3685e67c756068d75ea031 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 6.6E-42 T 18-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CH53_3800 4befca0dac3685e67c756068d75ea031 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 6.6E-42 T 18-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CH53_3800 4befca0dac3685e67c756068d75ea031 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 6.6E-42 T 18-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CH53_3800 4befca0dac3685e67c756068d75ea031 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 6.6E-42 T 18-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CH53_3800 4befca0dac3685e67c756068d75ea031 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 18-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CH53_3800 4befca0dac3685e67c756068d75ea031 173 SUPERFAMILY SSF53098 3 156 4.55E-55 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_3800 4befca0dac3685e67c756068d75ea031 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 3.3E-65 T 18-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CH53_3800 4befca0dac3685e67c756068d75ea031 173 Gene3D G3DSA:3.30.420.10 2 159 5.5E-54 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CH53_2451 742dacecf355117df68ad871d471bcc8 235 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 168 225 6.5E-13 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_2451 742dacecf355117df68ad871d471bcc8 235 Gene3D G3DSA:2.60.40.10 149 233 2.2E-17 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2451 742dacecf355117df68ad871d471bcc8 235 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 28 147 4.3E-36 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_2451 742dacecf355117df68ad871d471bcc8 235 PRINTS PR00969 Pili chaperone signature 102 119 3.8E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2451 742dacecf355117df68ad871d471bcc8 235 PRINTS PR00969 Pili chaperone signature 29 38 3.8E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2451 742dacecf355117df68ad871d471bcc8 235 PRINTS PR00969 Pili chaperone signature 74 95 3.8E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2451 742dacecf355117df68ad871d471bcc8 235 PRINTS PR00969 Pili chaperone signature 128 143 3.8E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2451 742dacecf355117df68ad871d471bcc8 235 PRINTS PR00969 Pili chaperone signature 163 178 3.8E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2451 742dacecf355117df68ad871d471bcc8 235 SUPERFAMILY SSF49584 151 229 1.96E-17 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_2451 742dacecf355117df68ad871d471bcc8 235 Gene3D G3DSA:2.60.40.10 31 147 2.3E-36 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2451 742dacecf355117df68ad871d471bcc8 235 SUPERFAMILY SSF49354 24 146 3.4E-35 T 18-10-2018 IPR008962 PapD-like superfamily CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 2.3E-52 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 4.5E-300 T 18-10-2018 IPR006297 Elongation factor 4 GO:0005525 CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 Gene3D G3DSA:3.30.70.870 286 367 2.7E-35 T 18-10-2018 CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 2.1E-49 T 18-10-2018 IPR013842 GTP-binding protein LepA, C-terminal CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 Gene3D G3DSA:3.30.70.2570 479 553 6.1E-34 T 18-10-2018 IPR038363 LepA, C-terminal domain superfamily CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 SUPERFAMILY SSF54980 399 493 9.11E-25 T 18-10-2018 IPR035647 EF-G domain III/V-like CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.612 T 18-10-2018 IPR006297 Elongation factor 4 GO:0005525 CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 SUPERFAMILY SSF54980 292 370 2.48E-18 T 18-10-2018 IPR035647 EF-G domain III/V-like CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 18-10-2018 IPR031157 Tr-type G domain, conserved site CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 Gene3D G3DSA:3.30.70.3380 368 478 9.5E-40 T 18-10-2018 CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 Gene3D G3DSA:2.40.30.10 186 285 8.1E-34 T 18-10-2018 CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 SUPERFAMILY SSF52540 2 233 4.62E-56 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 Gene3D G3DSA:3.40.50.300 1 185 1.4E-70 T 18-10-2018 CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 3.7E-11 T 18-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 169 6.1E-17 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CH53_682 97d398fc8bd9916ab80614abc61aebfd 599 Pfam PF00679 Elongation factor G C-terminus 399 482 7.8E-20 T 18-10-2018 IPR000640 Elongation factor EFG, domain V-like CH53_1343 82905ab476a3a38b42e6846d2d7dc71b 504 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 220 21.81 T 18-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CH53_1343 82905ab476a3a38b42e6846d2d7dc71b 504 PIRSF PIRSF017184 15 504 1.2E-143 T 18-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CH53_1343 82905ab476a3a38b42e6846d2d7dc71b 504 Gene3D G3DSA:3.40.1190.20 227 499 4.2E-84 T 18-10-2018 IPR029056 Ribokinase-like CH53_1343 82905ab476a3a38b42e6846d2d7dc71b 504 SUPERFAMILY SSF53613 232 499 1.39E-73 T 18-10-2018 IPR029056 Ribokinase-like CH53_1343 82905ab476a3a38b42e6846d2d7dc71b 504 Gene3D G3DSA:3.40.50.10260 15 225 2.0E-54 T 18-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 CH53_1343 82905ab476a3a38b42e6846d2d7dc71b 504 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 232 499 2.8E-80 T 18-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CH53_1343 82905ab476a3a38b42e6846d2d7dc71b 504 Pfam PF01256 Carbohydrate kinase 258 495 5.7E-68 T 18-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CH53_1343 82905ab476a3a38b42e6846d2d7dc71b 504 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 20 219 8.0E-51 T 18-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CH53_1343 82905ab476a3a38b42e6846d2d7dc71b 504 SUPERFAMILY SSF64153 16 256 7.06E-60 T 18-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 CH53_1343 82905ab476a3a38b42e6846d2d7dc71b 504 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 234 503 23.174 T 18-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CH53_1343 82905ab476a3a38b42e6846d2d7dc71b 504 Pfam PF03853 YjeF-related protein N-terminus 40 199 3.5E-42 T 18-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CH53_3155 f0924ca6615fc8f678d157826325912b 430 SUPERFAMILY SSF69304 155 428 2.35E-57 T 18-10-2018 CH53_3155 f0924ca6615fc8f678d157826325912b 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 2.0E-5 T 18-10-2018 IPR011659 WD40-like Beta Propeller CH53_3155 f0924ca6615fc8f678d157826325912b 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 1.4E-9 T 18-10-2018 IPR011659 WD40-like Beta Propeller CH53_3155 f0924ca6615fc8f678d157826325912b 430 Pfam PF07676 WD40-like Beta Propeller Repeat 369 397 0.0065 T 18-10-2018 IPR011659 WD40-like Beta Propeller CH53_3155 f0924ca6615fc8f678d157826325912b 430 Pfam PF07676 WD40-like Beta Propeller Repeat 282 315 9.3E-10 T 18-10-2018 IPR011659 WD40-like Beta Propeller CH53_3155 f0924ca6615fc8f678d157826325912b 430 SUPERFAMILY SSF52964 28 161 3.79E-40 T 18-10-2018 CH53_3155 f0924ca6615fc8f678d157826325912b 430 Gene3D G3DSA:3.40.50.10070 19 164 2.3E-53 T 18-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 CH53_3155 f0924ca6615fc8f678d157826325912b 430 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 4 426 50.166 T 18-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 CH53_3155 f0924ca6615fc8f678d157826325912b 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 427 1.4E-159 T 18-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 CH53_3155 f0924ca6615fc8f678d157826325912b 430 Gene3D G3DSA:2.120.10.30 165 430 1.3E-115 T 18-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CH53_3155 f0924ca6615fc8f678d157826325912b 430 Pfam PF04052 TolB amino-terminal domain 23 122 1.7E-32 T 18-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CH53_48 c425bcde9f5851719875f974f0d91d7f 466 SUPERFAMILY SSF53383 8 450 2.6E-126 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_48 c425bcde9f5851719875f974f0d91d7f 466 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 269 290 - T 18-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 CH53_48 c425bcde9f5851719875f974f0d91d7f 466 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 33 383 1.1E-106 T 18-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 CH53_48 c425bcde9f5851719875f974f0d91d7f 466 Gene3D G3DSA:3.90.1150.160 360 466 4.6E-35 T 18-10-2018 CH53_48 c425bcde9f5851719875f974f0d91d7f 466 Gene3D G3DSA:3.40.640.10 66 358 3.5E-81 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_48 c425bcde9f5851719875f974f0d91d7f 466 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 16 448 4.9E-201 T 18-10-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 CH53_4134 76725edae0c5f67355453d40c07faf9b 327 Gene3D G3DSA:3.90.550.10 2 230 1.5E-39 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_4134 76725edae0c5f67355453d40c07faf9b 327 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 326 61.784 T 18-10-2018 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 CH53_4134 76725edae0c5f67355453d40c07faf9b 327 SUPERFAMILY SSF53448 8 230 6.1E-38 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_4134 76725edae0c5f67355453d40c07faf9b 327 Pfam PF00535 Glycosyl transferase family 2 11 172 1.1E-31 T 18-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CH53_4408 ae3ae78c40d6a6697064a5e249295c06 373 SMART SM00558 85 215 3.3E-11 T 18-10-2018 IPR003347 JmjC domain CH53_4408 ae3ae78c40d6a6697064a5e249295c06 373 Pfam PF08007 Cupin superfamily protein 10 310 3.7E-102 T 18-10-2018 IPR003347 JmjC domain CH53_4408 ae3ae78c40d6a6697064a5e249295c06 373 Gene3D G3DSA:2.60.120.650 2 204 1.9E-87 T 18-10-2018 CH53_4408 ae3ae78c40d6a6697064a5e249295c06 373 Gene3D G3DSA:1.10.10.2510 205 373 2.5E-62 T 18-10-2018 CH53_4408 ae3ae78c40d6a6697064a5e249295c06 373 SUPERFAMILY SSF51197 7 291 3.02E-75 T 18-10-2018 CH53_2050 89426727e2ab5ea2c7a6c4aff050eb8f 317 Gene3D G3DSA:1.10.10.10 1 89 9.9E-30 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2050 89426727e2ab5ea2c7a6c4aff050eb8f 317 Pfam PF03466 LysR substrate binding domain 87 288 2.1E-40 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_2050 89426727e2ab5ea2c7a6c4aff050eb8f 317 Gene3D G3DSA:3.40.190.10 160 263 1.1E-71 T 18-10-2018 CH53_2050 89426727e2ab5ea2c7a6c4aff050eb8f 317 Gene3D G3DSA:3.40.190.10 90 286 1.1E-71 T 18-10-2018 CH53_2050 89426727e2ab5ea2c7a6c4aff050eb8f 317 SUPERFAMILY SSF46785 1 109 6.53E-20 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2050 89426727e2ab5ea2c7a6c4aff050eb8f 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.2E-15 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2050 89426727e2ab5ea2c7a6c4aff050eb8f 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2050 89426727e2ab5ea2c7a6c4aff050eb8f 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2050 89426727e2ab5ea2c7a6c4aff050eb8f 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2050 89426727e2ab5ea2c7a6c4aff050eb8f 317 SUPERFAMILY SSF53850 88 290 6.36E-38 T 18-10-2018 CH53_2311 0289bda1455ffa568f8f9b460753a1b4 673 SUPERFAMILY SSF51395 3 363 1.64E-109 T 18-10-2018 CH53_2311 0289bda1455ffa568f8f9b460753a1b4 673 Gene3D G3DSA:3.20.20.70 3 370 3.9E-123 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2311 0289bda1455ffa568f8f9b460753a1b4 673 SUPERFAMILY SSF51905 461 651 7.2E-22 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2311 0289bda1455ffa568f8f9b460753a1b4 673 Gene3D G3DSA:3.50.50.60 470 626 2.7E-117 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2311 0289bda1455ffa568f8f9b460753a1b4 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 4.8E-87 T 18-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CH53_2311 0289bda1455ffa568f8f9b460753a1b4 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 620 634 1.8E-5 T 18-10-2018 CH53_2311 0289bda1455ffa568f8f9b460753a1b4 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 399 1.8E-5 T 18-10-2018 CH53_2311 0289bda1455ffa568f8f9b460753a1b4 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 1.4E-11 T 18-10-2018 CH53_2311 0289bda1455ffa568f8f9b460753a1b4 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 1.4E-11 T 18-10-2018 CH53_2311 0289bda1455ffa568f8f9b460753a1b4 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 516 1.4E-11 T 18-10-2018 CH53_2311 0289bda1455ffa568f8f9b460753a1b4 673 SUPERFAMILY SSF51971 334 519 3.77E-39 T 18-10-2018 CH53_2311 0289bda1455ffa568f8f9b460753a1b4 673 Gene3D G3DSA:3.40.50.720 376 667 2.7E-117 T 18-10-2018 CH53_2311 0289bda1455ffa568f8f9b460753a1b4 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 636 8.1E-23 T 18-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CH53_259 b44f5b0f7063375e8a7f5c3c77a2d59a 602 PIRSF PIRSF002741 6 593 5.4E-146 T 18-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CH53_259 b44f5b0f7063375e8a7f5c3c77a2d59a 602 Gene3D G3DSA:3.40.190.10 29 588 9.1E-222 T 18-10-2018 CH53_259 b44f5b0f7063375e8a7f5c3c77a2d59a 602 SUPERFAMILY SSF53850 50 591 3.1E-112 T 18-10-2018 CH53_259 b44f5b0f7063375e8a7f5c3c77a2d59a 602 Gene3D G3DSA:3.10.105.10 310 568 9.1E-222 T 18-10-2018 CH53_259 b44f5b0f7063375e8a7f5c3c77a2d59a 602 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 99 504 3.8E-76 T 18-10-2018 IPR000914 Solute-binding protein family 5 domain CH53_444 a6472e27e6110b03853b8fdae45b801d 174 Gene3D G3DSA:1.10.8.640 18 103 2.1E-38 T 18-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CH53_444 a6472e27e6110b03853b8fdae45b801d 174 Pfam PF03918 Cytochrome C biogenesis protein 7 145 4.7E-57 T 18-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family CH53_3373 40284b019830fe7c5b73ff1d3283c820 318 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 318 105.756 T 18-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CH53_3373 40284b019830fe7c5b73ff1d3283c820 318 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 7 302 2.3E-74 T 18-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CH53_3373 40284b019830fe7c5b73ff1d3283c820 318 Pfam PF03186 CobD/Cbib protein 7 297 5.9E-104 T 18-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CH53_4265 a05e7e7bc4840baf1f3ca10891794157 375 SUPERFAMILY SSF50331 243 373 1.7E-22 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CH53_4265 a05e7e7bc4840baf1f3ca10891794157 375 SMART SM00382 29 217 2.1E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_4265 a05e7e7bc4840baf1f3ca10891794157 375 Gene3D G3DSA:3.40.50.300 4 227 3.3E-60 T 18-10-2018 CH53_4265 a05e7e7bc4840baf1f3ca10891794157 375 SUPERFAMILY SSF52540 6 247 1.63E-78 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4265 a05e7e7bc4840baf1f3ca10891794157 375 Pfam PF00005 ABC transporter 21 162 5.3E-28 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_4265 a05e7e7bc4840baf1f3ca10891794157 375 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_4265 a05e7e7bc4840baf1f3ca10891794157 375 Gene3D G3DSA:2.40.50.940 228 366 5.6E-26 T 18-10-2018 CH53_4265 a05e7e7bc4840baf1f3ca10891794157 375 Gene3D G3DSA:2.40.50.140 295 357 5.6E-26 T 18-10-2018 CH53_4265 a05e7e7bc4840baf1f3ca10891794157 375 Pfam PF08402 TOBE domain 289 365 8.6E-6 T 18-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 CH53_480 ab26bdfdec6642869defe082acb2f4ce 575 Pfam PF07969 Amidohydrolase family 55 573 7.0E-73 T 18-10-2018 IPR013108 Amidohydrolase 3 CH53_480 ab26bdfdec6642869defe082acb2f4ce 575 Gene3D G3DSA:2.30.40.10 13 549 4.7E-115 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_480 ab26bdfdec6642869defe082acb2f4ce 575 Gene3D G3DSA:3.10.310.70 85 200 4.7E-115 T 18-10-2018 CH53_480 ab26bdfdec6642869defe082acb2f4ce 575 SUPERFAMILY SSF51338 5 573 2.64E-17 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_480 ab26bdfdec6642869defe082acb2f4ce 575 Gene3D G3DSA:3.20.20.140 67 532 4.7E-115 T 18-10-2018 CH53_480 ab26bdfdec6642869defe082acb2f4ce 575 SUPERFAMILY SSF51556 66 533 1.4E-30 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_3366 54179a39f9aaa7313b37183d1c810978 223 Pfam PF02288 Dehydratase medium subunit 68 180 1.7E-34 T 18-10-2018 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor CH53_3366 54179a39f9aaa7313b37183d1c810978 223 Gene3D G3DSA:3.40.50.10150 45 223 3.5E-90 T 18-10-2018 IPR010254 B12-dependent dehydratases, beta subunit CH53_3366 54179a39f9aaa7313b37183d1c810978 223 PIRSF PIRSF018506 1 223 5.5E-111 T 18-10-2018 IPR025541 Propanediol/glycerol dehydratase, medium subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 CH53_3366 54179a39f9aaa7313b37183d1c810978 223 SUPERFAMILY SSF52968 46 223 1.1E-72 T 18-10-2018 IPR010254 B12-dependent dehydratases, beta subunit CH53_2168 8acfb0aee82be5a306391ffed3b3d47b 294 Gene3D G3DSA:1.10.10.10 1 91 1.2E-27 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2168 8acfb0aee82be5a306391ffed3b3d47b 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2168 8acfb0aee82be5a306391ffed3b3d47b 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2168 8acfb0aee82be5a306391ffed3b3d47b 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2168 8acfb0aee82be5a306391ffed3b3d47b 294 Pfam PF03466 LysR substrate binding domain 89 289 2.8E-40 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_2168 8acfb0aee82be5a306391ffed3b3d47b 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-21 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2168 8acfb0aee82be5a306391ffed3b3d47b 294 SUPERFAMILY SSF53850 90 293 2.23E-39 T 18-10-2018 CH53_2168 8acfb0aee82be5a306391ffed3b3d47b 294 Gene3D G3DSA:3.40.190.290 92 290 3.1E-47 T 18-10-2018 CH53_2168 8acfb0aee82be5a306391ffed3b3d47b 294 SUPERFAMILY SSF46785 1 85 2.18E-23 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1615 1aeae057127a8c883ae7e2686e7a56af 189 Gene3D G3DSA:1.10.260.40 3 84 6.3E-18 T 18-10-2018 CH53_1615 1aeae057127a8c883ae7e2686e7a56af 189 SUPERFAMILY SSF47413 15 76 3.75E-16 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_1615 1aeae057127a8c883ae7e2686e7a56af 189 Gene3D G3DSA:2.60.120.10 103 189 7.6E-15 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_1615 1aeae057127a8c883ae7e2686e7a56af 189 SMART SM00530 18 73 1.3E-14 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_1615 1aeae057127a8c883ae7e2686e7a56af 189 Pfam PF01381 Helix-turn-helix 19 71 6.0E-15 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_1615 1aeae057127a8c883ae7e2686e7a56af 189 SUPERFAMILY SSF51182 66 186 5.26E-18 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_1091 a2d3c5d3e4ee58c928c6de91f26ab3f0 288 Gene3D G3DSA:1.10.10.60 56 121 1.4E-20 T 18-10-2018 CH53_1091 a2d3c5d3e4ee58c928c6de91f26ab3f0 288 Gene3D G3DSA:1.10.10.60 3 55 1.2E-26 T 18-10-2018 CH53_1091 a2d3c5d3e4ee58c928c6de91f26ab3f0 288 SUPERFAMILY SSF46689 57 107 5.82E-12 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1091 a2d3c5d3e4ee58c928c6de91f26ab3f0 288 Gene3D G3DSA:3.20.80.10 122 288 2.6E-50 T 18-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CH53_1091 a2d3c5d3e4ee58c928c6de91f26ab3f0 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 4.3E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_1091 a2d3c5d3e4ee58c928c6de91f26ab3f0 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 4.3E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_1091 a2d3c5d3e4ee58c928c6de91f26ab3f0 288 Pfam PF12833 Helix-turn-helix domain 27 105 1.6E-20 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_1091 a2d3c5d3e4ee58c928c6de91f26ab3f0 288 SUPERFAMILY SSF55136 123 287 6.02E-57 T 18-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CH53_1091 a2d3c5d3e4ee58c928c6de91f26ab3f0 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CH53_1091 a2d3c5d3e4ee58c928c6de91f26ab3f0 288 Pfam PF06445 GyrI-like small molecule binding domain 127 287 1.1E-25 T 18-10-2018 IPR029442 GyrI-like small molecule binding domain CH53_1091 a2d3c5d3e4ee58c928c6de91f26ab3f0 288 SUPERFAMILY SSF46689 6 55 6.72E-10 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1091 a2d3c5d3e4ee58c928c6de91f26ab3f0 288 SMART SM00342 21 104 3.0E-31 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_1091 a2d3c5d3e4ee58c928c6de91f26ab3f0 288 SMART SM00871 126 287 7.9E-19 T 18-10-2018 IPR010499 Bacterial transcription activator, effector binding CH53_1780 974a343852a3d7fe904c4129ff0060e9 153 Pfam PF01037 Lrp/AsnC ligand binding domain 77 144 4.5E-17 T 18-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CH53_1780 974a343852a3d7fe904c4129ff0060e9 153 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 8.9E-15 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_1780 974a343852a3d7fe904c4129ff0060e9 153 Gene3D G3DSA:1.10.10.10 3 57 1.0E-24 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1780 974a343852a3d7fe904c4129ff0060e9 153 SUPERFAMILY SSF54909 68 153 2.15E-19 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_1780 974a343852a3d7fe904c4129ff0060e9 153 SUPERFAMILY SSF46785 5 67 4.27E-20 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1780 974a343852a3d7fe904c4129ff0060e9 153 Gene3D G3DSA:3.30.70.920 59 141 5.8E-36 T 18-10-2018 CH53_1780 974a343852a3d7fe904c4129ff0060e9 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 18-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CH53_1780 974a343852a3d7fe904c4129ff0060e9 153 SMART SM00344 7 114 7.9E-45 T 18-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CH53_1780 974a343852a3d7fe904c4129ff0060e9 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 3.4E-14 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_1780 974a343852a3d7fe904c4129ff0060e9 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 3.4E-14 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_1780 974a343852a3d7fe904c4129ff0060e9 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 3.4E-14 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_3441 1b6ad44b31c234a818e122ec0cdf405e 441 Gene3D G3DSA:1.20.1250.20 226 420 3.1E-39 T 18-10-2018 CH53_3441 1b6ad44b31c234a818e122ec0cdf405e 441 PIRSF PIRSF002808 1 431 2.2E-126 T 18-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 CH53_3441 1b6ad44b31c234a818e122ec0cdf405e 441 SUPERFAMILY SSF103473 6 416 6.54E-76 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_3441 1b6ad44b31c234a818e122ec0cdf405e 441 Pfam PF07690 Major Facilitator Superfamily 22 382 1.7E-51 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_3441 1b6ad44b31c234a818e122ec0cdf405e 441 Gene3D G3DSA:1.20.1250.20 5 209 3.0E-50 T 18-10-2018 CH53_1966 396d245e88e912a57bb55e0d1fe5da42 673 Gene3D G3DSA:1.10.10.160 108 181 8.8E-100 T 18-10-2018 IPR013986 DExx box DNA helicase domain superfamily CH53_1966 396d245e88e912a57bb55e0d1fe5da42 673 Gene3D G3DSA:1.10.486.10 377 544 1.9E-133 T 18-10-2018 CH53_1966 396d245e88e912a57bb55e0d1fe5da42 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 1.9E-74 T 18-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CH53_1966 396d245e88e912a57bb55e0d1fe5da42 673 Gene3D G3DSA:3.40.50.300 4 266 8.8E-100 T 18-10-2018 CH53_1966 396d245e88e912a57bb55e0d1fe5da42 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 40.793 T 18-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CH53_1966 396d245e88e912a57bb55e0d1fe5da42 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 2.5E-70 T 18-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CH53_1966 396d245e88e912a57bb55e0d1fe5da42 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 666 0.0 T 18-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CH53_1966 396d245e88e912a57bb55e0d1fe5da42 673 SUPERFAMILY SSF52540 2 638 1.13E-160 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1966 396d245e88e912a57bb55e0d1fe5da42 673 Gene3D G3DSA:3.40.50.300 274 632 1.9E-133 T 18-10-2018 CH53_4235 e79c9636bbe760035b11548cf84396d2 357 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 323 8.1E-30 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_2869 e0b60668a28eb7d022cb80c656283acb 567 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 2.0E-38 T 18-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CH53_2869 e0b60668a28eb7d022cb80c656283acb 567 SUPERFAMILY SSF53850 114 562 8.32E-53 T 18-10-2018 CH53_2869 e0b60668a28eb7d022cb80c656283acb 567 Gene3D G3DSA:3.40.190.10 115 311 2.1E-26 T 18-10-2018 CH53_2869 e0b60668a28eb7d022cb80c656283acb 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 166 327 6.7E-17 T 18-10-2018 IPR000914 Solute-binding protein family 5 domain CH53_1490 c2409861124107167353a9510a244c40 157 PRINTS PR00601 Bacterioferritin signature 86 106 5.6E-76 T 18-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CH53_1490 c2409861124107167353a9510a244c40 157 PRINTS PR00601 Bacterioferritin signature 3 22 5.6E-76 T 18-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CH53_1490 c2409861124107167353a9510a244c40 157 PRINTS PR00601 Bacterioferritin signature 44 64 5.6E-76 T 18-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CH53_1490 c2409861124107167353a9510a244c40 157 PRINTS PR00601 Bacterioferritin signature 65 85 5.6E-76 T 18-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CH53_1490 c2409861124107167353a9510a244c40 157 PRINTS PR00601 Bacterioferritin signature 107 127 5.6E-76 T 18-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CH53_1490 c2409861124107167353a9510a244c40 157 PRINTS PR00601 Bacterioferritin signature 23 43 5.6E-76 T 18-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CH53_1490 c2409861124107167353a9510a244c40 157 PRINTS PR00601 Bacterioferritin signature 128 149 5.6E-76 T 18-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CH53_1490 c2409861124107167353a9510a244c40 157 PIRSF PIRSF002560 1 157 1.8E-71 T 18-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CH53_1490 c2409861124107167353a9510a244c40 157 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 1.2E-80 T 18-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CH53_1490 c2409861124107167353a9510a244c40 157 Gene3D G3DSA:1.20.1260.10 1 157 6.3E-72 T 18-10-2018 IPR012347 Ferritin-like CH53_1490 c2409861124107167353a9510a244c40 157 Pfam PF00210 Ferritin-like domain 8 143 5.1E-39 T 18-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CH53_1490 c2409861124107167353a9510a244c40 157 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 18-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CH53_1490 c2409861124107167353a9510a244c40 157 SUPERFAMILY SSF47240 1 156 8.96E-54 T 18-10-2018 IPR009078 Ferritin-like superfamily CH53_1652 89d0bf32988c48bda8bb5eadc8c15c8c 141 SUPERFAMILY SSF82784 1 140 1.83E-43 T 18-10-2018 IPR036102 OsmC/Ohr superfamily CH53_1652 89d0bf32988c48bda8bb5eadc8c15c8c 141 Gene3D G3DSA:3.30.300.20 48 141 5.1E-33 T 18-10-2018 IPR015946 K homology domain-like, alpha/beta CH53_1652 89d0bf32988c48bda8bb5eadc8c15c8c 141 Pfam PF02566 OsmC-like protein 45 138 1.7E-16 T 18-10-2018 IPR003718 OsmC/Ohr family CH53_1652 89d0bf32988c48bda8bb5eadc8c15c8c 141 Gene3D G3DSA:2.20.25.10 1 47 1.0E-22 T 18-10-2018 CH53_1652 89d0bf32988c48bda8bb5eadc8c15c8c 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 6.2E-55 T 18-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 CH53_3692 a8940932c500d315f79c39173b501864 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.5E-6 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_3692 a8940932c500d315f79c39173b501864 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.5E-6 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_3692 a8940932c500d315f79c39173b501864 259 SUPERFAMILY SSF46785 5 67 7.61E-13 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3692 a8940932c500d315f79c39173b501864 259 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 4.0E-17 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_3692 a8940932c500d315f79c39173b501864 259 SUPERFAMILY SSF100950 74 233 6.38E-26 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_3692 a8940932c500d315f79c39173b501864 259 SMART SM01134 73 233 3.4E-62 T 18-10-2018 CH53_3692 a8940932c500d315f79c39173b501864 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 18-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CH53_3692 a8940932c500d315f79c39173b501864 259 SMART SM00420 6 58 1.8E-23 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_3692 a8940932c500d315f79c39173b501864 259 Pfam PF00455 DeoR C terminal sensor domain 77 232 1.0E-47 T 18-10-2018 IPR014036 DeoR C-terminal sensor domain CH53_3692 a8940932c500d315f79c39173b501864 259 Gene3D G3DSA:1.10.10.10 2 57 1.1E-8 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1527 e32e8687fbd235354742f0ae63b9393d 437 Gene3D G3DSA:3.40.50.720 1 169 4.2E-60 T 18-10-2018 CH53_1527 e32e8687fbd235354742f0ae63b9393d 437 SUPERFAMILY SSF51735 2 169 7.89E-50 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1527 e32e8687fbd235354742f0ae63b9393d 437 Gene3D G3DSA:3.90.110.10 170 437 3.2E-100 T 18-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CH53_1527 e32e8687fbd235354742f0ae63b9393d 437 Pfam PF02056 Family 4 glycosyl hydrolase 5 185 1.9E-53 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_1527 e32e8687fbd235354742f0ae63b9393d 437 SUPERFAMILY SSF56327 172 435 2.24E-92 T 18-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CH53_1527 e32e8687fbd235354742f0ae63b9393d 437 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 410 5.3E-51 T 18-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CH53_1527 e32e8687fbd235354742f0ae63b9393d 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 9.5E-45 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_1527 e32e8687fbd235354742f0ae63b9393d 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 9.5E-45 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_1527 e32e8687fbd235354742f0ae63b9393d 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 9.5E-45 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_1527 e32e8687fbd235354742f0ae63b9393d 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 9.5E-45 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_1527 e32e8687fbd235354742f0ae63b9393d 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 9.5E-45 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_1527 e32e8687fbd235354742f0ae63b9393d 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 9.5E-45 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_1527 e32e8687fbd235354742f0ae63b9393d 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 9.5E-45 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_1527 e32e8687fbd235354742f0ae63b9393d 437 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 171 - T 18-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CH53_3965 050d082410fef2935a8dd7c3d3139f8d 432 SUPERFAMILY SSF103473 36 424 1.09E-59 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_3965 050d082410fef2935a8dd7c3d3139f8d 432 ProSitePatterns PS00216 Sugar transport proteins signature 1. 103 119 - T 18-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CH53_3965 050d082410fef2935a8dd7c3d3139f8d 432 Pfam PF07690 Major Facilitator Superfamily 54 271 7.7E-28 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_3965 050d082410fef2935a8dd7c3d3139f8d 432 Gene3D G3DSA:1.20.1250.20 43 424 8.7E-46 T 18-10-2018 CH53_1086 71c39c20de120a1a16de80209417a4d3 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 18-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CH53_1086 71c39c20de120a1a16de80209417a4d3 819 Pfam PF13840 ACT domain 314 376 1.2E-8 T 18-10-2018 IPR027795 CASTOR, ACT domain CH53_1086 71c39c20de120a1a16de80209417a4d3 819 Pfam PF13840 ACT domain 395 453 9.1E-8 T 18-10-2018 IPR027795 CASTOR, ACT domain CH53_1086 71c39c20de120a1a16de80209417a4d3 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 18-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CH53_1086 71c39c20de120a1a16de80209417a4d3 819 Gene3D G3DSA:3.40.1160.10 1 297 1.9E-84 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CH53_1086 71c39c20de120a1a16de80209417a4d3 819 SUPERFAMILY SSF51735 464 636 7.65E-39 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1086 71c39c20de120a1a16de80209417a4d3 819 Gene3D G3DSA:3.40.50.720 466 811 4.8E-119 T 18-10-2018 CH53_1086 71c39c20de120a1a16de80209417a4d3 819 Pfam PF00742 Homoserine dehydrogenase 614 810 2.4E-48 T 18-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CH53_1086 71c39c20de120a1a16de80209417a4d3 819 SUPERFAMILY SSF55021 304 381 2.69E-23 T 18-10-2018 CH53_1086 71c39c20de120a1a16de80209417a4d3 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 3.9E-28 T 18-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CH53_1086 71c39c20de120a1a16de80209417a4d3 819 Gene3D G3DSA:3.30.360.10 625 795 4.8E-119 T 18-10-2018 CH53_1086 71c39c20de120a1a16de80209417a4d3 819 PIRSF PIRSF000727 1 817 0.0 T 18-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CH53_1086 71c39c20de120a1a16de80209417a4d3 819 Gene3D G3DSA:3.30.2130.10 304 464 2.4E-48 T 18-10-2018 CH53_1086 71c39c20de120a1a16de80209417a4d3 819 SUPERFAMILY SSF55347 614 797 1.18E-51 T 18-10-2018 CH53_1086 71c39c20de120a1a16de80209417a4d3 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 4.1E-144 T 18-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CH53_1086 71c39c20de120a1a16de80209417a4d3 819 SUPERFAMILY SSF53633 1 297 1.14E-72 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CH53_1086 71c39c20de120a1a16de80209417a4d3 819 SUPERFAMILY SSF55021 384 476 6.59E-22 T 18-10-2018 CH53_1086 71c39c20de120a1a16de80209417a4d3 819 Pfam PF00696 Amino acid kinase family 2 284 1.4E-46 T 18-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 Gene3D G3DSA:3.30.230.80 227 399 4.9E-71 T 18-10-2018 CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 621 32.834 T 18-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 Gene3D G3DSA:1.20.120.790 491 622 5.1E-46 T 18-10-2018 IPR037196 HSP90, C-terminal domain CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 PRINTS PR00775 90kDa heat shock protein signature 172 189 2.4E-64 T 18-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 PRINTS PR00775 90kDa heat shock protein signature 120 142 2.4E-64 T 18-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 PRINTS PR00775 90kDa heat shock protein signature 75 92 2.4E-64 T 18-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 PRINTS PR00775 90kDa heat shock protein signature 26 48 2.4E-64 T 18-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 PRINTS PR00775 90kDa heat shock protein signature 190 208 2.4E-64 T 18-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 PRINTS PR00775 90kDa heat shock protein signature 93 110 2.4E-64 T 18-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 PRINTS PR00775 90kDa heat shock protein signature 5 25 2.4E-64 T 18-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 SUPERFAMILY SSF55874 4 213 4.19E-66 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 Gene3D G3DSA:3.40.50.11260 400 490 1.5E-36 T 18-10-2018 CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 SMART SM00387 27 184 1.1E-9 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 18-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 Gene3D G3DSA:3.30.565.10 1 215 3.6E-79 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 182 1.3E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 PIRSF PIRSF002583 1 622 3.1E-217 T 18-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 SUPERFAMILY SSF110942 508 621 1.57E-35 T 18-10-2018 IPR037196 HSP90, C-terminal domain CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 SUPERFAMILY SSF54211 228 483 1.21E-100 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_2903 1e5867464ceab796b6d0cd68d222fb69 622 Pfam PF00183 Hsp90 protein 212 621 8.5E-126 T 18-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CH53_2236 217dde544416d9a4ee6898eea7fd2577 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 148 4.4E-19 T 18-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CH53_2236 217dde544416d9a4ee6898eea7fd2577 154 SUPERFAMILY SSF57825 101 151 2.09E-15 T 18-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily CH53_2236 217dde544416d9a4ee6898eea7fd2577 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.2E-29 T 18-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CH53_2236 217dde544416d9a4ee6898eea7fd2577 154 Gene3D G3DSA:3.30.70.140 1 100 1.3E-36 T 18-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily CH53_2236 217dde544416d9a4ee6898eea7fd2577 154 SUPERFAMILY SSF54893 2 100 1.02E-34 T 18-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily CH53_2236 217dde544416d9a4ee6898eea7fd2577 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.796 T 18-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 CH53_2236 217dde544416d9a4ee6898eea7fd2577 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 3.0E-47 T 18-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CH53_2236 217dde544416d9a4ee6898eea7fd2577 154 Gene3D G3DSA:2.30.30.20 101 153 7.9E-25 T 18-10-2018 CH53_2236 217dde544416d9a4ee6898eea7fd2577 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 6 151 1.8E-64 T 18-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 CH53_1003 dd635c32409219e21d6ff8ae6fd2ef46 366 Gene3D G3DSA:1.20.81.30 217 328 2.8E-23 T 18-10-2018 CH53_1003 dd635c32409219e21d6ff8ae6fd2ef46 366 Pfam PF00482 Type II secretion system (T2SS), protein F 236 357 2.0E-27 T 18-10-2018 IPR018076 Type II secretion system F domain CH53_1003 dd635c32409219e21d6ff8ae6fd2ef46 366 Pfam PF00482 Type II secretion system (T2SS), protein F 31 153 2.9E-29 T 18-10-2018 IPR018076 Type II secretion system F domain CH53_1003 dd635c32409219e21d6ff8ae6fd2ef46 366 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 125 153 - T 18-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CH53_1003 dd635c32409219e21d6ff8ae6fd2ef46 366 PRINTS PR00812 Bacterial general secretion pathway protein F signature 26 38 2.0E-17 T 18-10-2018 IPR003004 GspF/PilC family CH53_1003 dd635c32409219e21d6ff8ae6fd2ef46 366 PRINTS PR00812 Bacterial general secretion pathway protein F signature 330 344 2.0E-17 T 18-10-2018 IPR003004 GspF/PilC family CH53_1003 dd635c32409219e21d6ff8ae6fd2ef46 366 PRINTS PR00812 Bacterial general secretion pathway protein F signature 346 365 2.0E-17 T 18-10-2018 IPR003004 GspF/PilC family CH53_1003 dd635c32409219e21d6ff8ae6fd2ef46 366 PRINTS PR00812 Bacterial general secretion pathway protein F signature 125 153 2.0E-17 T 18-10-2018 IPR003004 GspF/PilC family CH53_1003 dd635c32409219e21d6ff8ae6fd2ef46 366 Gene3D G3DSA:1.20.81.30 20 133 1.5E-27 T 18-10-2018 CH53_2433 b2481d433413a8f22aa1f27f31616750 728 Pfam PF07715 TonB-dependent Receptor Plug Domain 39 140 2.1E-17 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain CH53_2433 b2481d433413a8f22aa1f27f31616750 728 Gene3D G3DSA:2.170.130.10 24 146 2.0E-22 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CH53_2433 b2481d433413a8f22aa1f27f31616750 728 Gene3D G3DSA:2.40.170.20 152 728 2.3E-54 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH53_2433 b2481d433413a8f22aa1f27f31616750 728 SUPERFAMILY SSF56935 17 726 3.66E-92 T 18-10-2018 CH53_2433 b2481d433413a8f22aa1f27f31616750 728 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 40 728 5.9E-134 T 18-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CH53_2433 b2481d433413a8f22aa1f27f31616750 728 Pfam PF00593 TonB dependent receptor 236 725 9.9E-29 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CH53_2433 b2481d433413a8f22aa1f27f31616750 728 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 711 728 - T 18-10-2018 IPR010917 TonB-dependent receptor, conserved site CH53_1145 72b3c5449a489cf292ee9002ae14fd38 500 SUPERFAMILY SSF51905 21 498 2.98E-26 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1145 72b3c5449a489cf292ee9002ae14fd38 500 Gene3D G3DSA:3.50.50.60 407 499 7.1E-6 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1145 72b3c5449a489cf292ee9002ae14fd38 500 Gene3D G3DSA:3.50.50.60 12 53 9.3E-6 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1145 72b3c5449a489cf292ee9002ae14fd38 500 Gene3D G3DSA:3.50.50.60 187 266 2.3E-5 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1145 72b3c5449a489cf292ee9002ae14fd38 500 Pfam PF05199 GMC oxidoreductase 346 494 5.8E-7 T 18-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CH53_2593 190a58f9c6764dd85ecc66e1b31492e6 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 3.7E-47 T 18-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CH53_2593 190a58f9c6764dd85ecc66e1b31492e6 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 312 5.7E-139 T 18-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CH53_2593 190a58f9c6764dd85ecc66e1b31492e6 317 Gene3D G3DSA:3.30.470.20 115 295 4.8E-121 T 18-10-2018 CH53_2593 190a58f9c6764dd85ecc66e1b31492e6 317 Gene3D G3DSA:3.30.1490.20 137 201 4.8E-121 T 18-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CH53_2593 190a58f9c6764dd85ecc66e1b31492e6 317 SUPERFAMILY SSF56059 123 311 2.29E-57 T 18-10-2018 CH53_2593 190a58f9c6764dd85ecc66e1b31492e6 317 SUPERFAMILY SSF52440 2 122 2.1E-46 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CH53_2593 190a58f9c6764dd85ecc66e1b31492e6 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 2.3E-80 T 18-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CH53_2593 190a58f9c6764dd85ecc66e1b31492e6 317 Gene3D G3DSA:3.40.50.20 7 114 4.8E-121 T 18-10-2018 CH53_2593 190a58f9c6764dd85ecc66e1b31492e6 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 182.556 T 18-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 Gene3D G3DSA:3.40.50.2300 978 1114 1.4E-35 T 18-10-2018 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 852 964 1.1E-23 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 90 302 8.9E-15 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 Gene3D G3DSA:1.20.120.160 1160 1283 8.6E-8 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 Gene3D G3DSA:3.40.190.10 171 263 2.6E-38 T 18-10-2018 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 SMART SM00062 87 304 9.5E-39 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 SMART SM00062 328 552 3.6E-19 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 Gene3D G3DSA:1.10.287.130 714 800 1.5E-17 T 18-10-2018 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 Pfam PF00072 Response regulator receiver domain 993 1104 9.4E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 Gene3D G3DSA:3.30.565.10 801 970 5.1E-45 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 SUPERFAMILY SSF52172 989 1108 7.83E-35 T 18-10-2018 IPR011006 CheY-like superfamily CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 SUPERFAMILY SSF47384 722 803 6.67E-15 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 SUPERFAMILY SSF53850 84 302 5.74E-23 T 18-10-2018 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 SMART SM00388 738 802 2.7E-15 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 336 548 4.6E-25 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 SUPERFAMILY SSF55874 791 966 9.04E-41 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 SMART SM00448 991 1105 1.4E-31 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 SMART SM00387 849 965 7.9E-33 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 SUPERFAMILY SSF53850 321 551 4.26E-36 T 18-10-2018 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 Gene3D G3DSA:3.40.190.10 319 548 3.6E-49 T 18-10-2018 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 PRINTS PR00344 Bacterial sensor protein C-terminal signature 925 943 6.3E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 PRINTS PR00344 Bacterial sensor protein C-terminal signature 908 918 6.3E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 PRINTS PR00344 Bacterial sensor protein C-terminal signature 890 904 6.3E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 PRINTS PR00344 Bacterial sensor protein C-terminal signature 949 962 6.3E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 Pfam PF00512 His Kinase A (phospho-acceptor) domain 739 802 2.0E-11 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 SUPERFAMILY SSF47226 1088 1253 7.46E-13 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 Gene3D G3DSA:3.40.190.10 85 300 2.6E-38 T 18-10-2018 CH53_3435 480a6b93f15f084c0da5f3e393b36569 1288 Gene3D G3DSA:3.40.190.10 415 511 3.6E-49 T 18-10-2018 CH53_2354 63b90cc90a868ececc83899c21ca75dc 415 Pfam PF01547 Bacterial extracellular solute-binding protein 67 306 2.1E-20 T 18-10-2018 IPR006059 Bacterial extracellular solute-binding protein CH53_2354 63b90cc90a868ececc83899c21ca75dc 415 SUPERFAMILY SSF53850 22 409 4.06E-52 T 18-10-2018 CH53_2354 63b90cc90a868ececc83899c21ca75dc 415 Gene3D G3DSA:3.40.190.10 22 370 5.2E-144 T 18-10-2018 CH53_2354 63b90cc90a868ececc83899c21ca75dc 415 Gene3D G3DSA:3.40.190.10 137 395 5.2E-144 T 18-10-2018 CH53_2876 482521def59f09a22c99a22a00da0045 429 Pfam PF00909 Ammonium Transporter Family 34 427 6.0E-128 T 18-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CH53_2876 482521def59f09a22c99a22a00da0045 429 TIGRFAM TIGR00836 amt: ammonium transporter 32 427 1.6E-137 T 18-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CH53_2876 482521def59f09a22c99a22a00da0045 429 ProSitePatterns PS01219 Ammonium transporters signature. 183 208 - T 18-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CH53_2876 482521def59f09a22c99a22a00da0045 429 Gene3D G3DSA:1.10.3430.10 24 408 2.0E-146 T 18-10-2018 IPR029020 Ammonium/urea transporter CH53_2876 482521def59f09a22c99a22a00da0045 429 SUPERFAMILY SSF111352 28 408 4.45E-128 T 18-10-2018 CH53_2671 a3e3d118124e0f2259b20b41c4b9beb2 295 SUPERFAMILY SSF56281 27 250 1.22E-39 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_2671 a3e3d118124e0f2259b20b41c4b9beb2 295 SMART SM00849 43 228 7.4E-18 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_2671 a3e3d118124e0f2259b20b41c4b9beb2 295 Pfam PF00753 Metallo-beta-lactamase superfamily 44 228 3.5E-6 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_2671 a3e3d118124e0f2259b20b41c4b9beb2 295 Gene3D G3DSA:3.60.15.10 25 263 4.4E-27 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_3733 24c70ebae435d2420526852e06753f50 414 Gene3D G3DSA:3.40.640.10 59 310 7.8E-153 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_3733 24c70ebae435d2420526852e06753f50 414 SUPERFAMILY SSF53383 16 402 6.25E-125 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_3733 24c70ebae435d2420526852e06753f50 414 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 228 265 - T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CH53_3733 24c70ebae435d2420526852e06753f50 414 Pfam PF00202 Aminotransferase class-III 24 401 1.9E-124 T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CH53_3733 24c70ebae435d2420526852e06753f50 414 PIRSF PIRSF000521 23 164 8.1E-7 T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CH53_3733 24c70ebae435d2420526852e06753f50 414 PIRSF PIRSF000521 179 408 1.7E-38 T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CH53_3733 24c70ebae435d2420526852e06753f50 414 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 409 1.1E-222 T 18-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 CH53_3733 24c70ebae435d2420526852e06753f50 414 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 408 70.036 T 18-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CH53_3733 24c70ebae435d2420526852e06753f50 414 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 403 1.3E-155 T 18-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CH53_3733 24c70ebae435d2420526852e06753f50 414 Hamap MF_01173 Succinylornithine transaminase [astC]. 3 414 73.733 T 18-10-2018 IPR026330 Succinylornithine transaminase GO:0006527|GO:0006593|GO:0043825 KEGG: 00330+2.6.1.81 CH53_3733 24c70ebae435d2420526852e06753f50 414 Gene3D G3DSA:3.90.1150.10 24 398 7.8E-153 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_182 6522e2cd03a8356e5be19e5e1e7cb720 298 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 137 296 1.0E-71 T 18-10-2018 IPR005642 Lysine exporter LysO CH53_182 6522e2cd03a8356e5be19e5e1e7cb720 298 Pfam PF03956 Lysine exporter LysO 113 297 1.2E-56 T 18-10-2018 IPR005642 Lysine exporter LysO CH53_1314 221e6cb257f83d940f0d9fa83f464540 443 Pfam PF00571 CBS domain 287 333 0.003 T 18-10-2018 IPR000644 CBS domain CH53_1314 221e6cb257f83d940f0d9fa83f464540 443 Gene3D G3DSA:3.10.580.10 193 346 5.1E-33 T 18-10-2018 CH53_1314 221e6cb257f83d940f0d9fa83f464540 443 Pfam PF03471 Transporter associated domain 348 425 5.8E-20 T 18-10-2018 IPR005170 Transporter-associated domain CH53_1314 221e6cb257f83d940f0d9fa83f464540 443 Pfam PF01595 Domain of unknown function DUF21 6 197 1.4E-37 T 18-10-2018 IPR002550 CNNM, transmembrane domain CH53_1314 221e6cb257f83d940f0d9fa83f464540 443 Gene3D G3DSA:3.30.465.10 347 428 3.3E-29 T 18-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CH53_1314 221e6cb257f83d940f0d9fa83f464540 443 SMART SM01091 346 426 1.6E-26 T 18-10-2018 IPR005170 Transporter-associated domain CH53_1314 221e6cb257f83d940f0d9fa83f464540 443 SUPERFAMILY SSF54631 200 335 1.05E-20 T 18-10-2018 CH53_1314 221e6cb257f83d940f0d9fa83f464540 443 SUPERFAMILY SSF56176 344 428 1.09E-21 T 18-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CH53_2435 ec37631031604c083a2a8b1e078d9605 582 Pfam PF04183 IucA / IucC family 132 374 1.0E-67 T 18-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 CH53_2435 ec37631031604c083a2a8b1e078d9605 582 Gene3D G3DSA:1.10.274.90 4 113 1.6E-15 T 18-10-2018 CH53_2435 ec37631031604c083a2a8b1e078d9605 582 Pfam PF06276 Ferric iron reductase FhuF-like transporter 396 551 1.4E-34 T 18-10-2018 IPR022770 Ferric iron reductase FhuF domain CH53_2435 ec37631031604c083a2a8b1e078d9605 582 Gene3D G3DSA:1.10.510.40 364 564 3.2E-58 T 18-10-2018 CH53_2067 e5a345b5c3c678a9b523398fd776425e 162 Gene3D G3DSA:3.30.70.940 1 162 4.2E-53 T 18-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CH53_2067 e5a345b5c3c678a9b523398fd776425e 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 46.103 T 18-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 CH53_2067 e5a345b5c3c678a9b523398fd776425e 162 Pfam PF02357 Transcription termination factor nusG 2 94 4.1E-16 T 18-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CH53_2067 e5a345b5c3c678a9b523398fd776425e 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 7.4E-56 T 18-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 CH53_2067 e5a345b5c3c678a9b523398fd776425e 162 SUPERFAMILY SSF82679 1 98 2.09E-25 T 18-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CH53_2067 e5a345b5c3c678a9b523398fd776425e 162 SMART SM00738 1 100 1.5E-29 T 18-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CH53_1894 bcf125f44c92bb2efe2f03227ce86fbb 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 330 2.3E-177 T 18-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CH53_1894 bcf125f44c92bb2efe2f03227ce86fbb 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 8.1E-131 T 18-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CH53_1894 bcf125f44c92bb2efe2f03227ce86fbb 336 SUPERFAMILY SSF56655 1 325 6.71E-109 T 18-10-2018 CH53_1894 bcf125f44c92bb2efe2f03227ce86fbb 336 Gene3D G3DSA:3.40.190.90 110 277 1.9E-128 T 18-10-2018 CH53_1894 bcf125f44c92bb2efe2f03227ce86fbb 336 Gene3D G3DSA:3.30.540.10 7 320 1.9E-128 T 18-10-2018 CH53_1894 bcf125f44c92bb2efe2f03227ce86fbb 336 PIRSF PIRSF004532 1 332 5.6E-138 T 18-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CH53_3952 5500853226c9d48ebe4dc35e27ee4c19 468 Gene3D G3DSA:3.30.1360.60 3 77 6.4E-24 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_3952 5500853226c9d48ebe4dc35e27ee4c19 468 Pfam PF02378 Phosphotransferase system, EIIC 113 398 1.1E-31 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_3952 5500853226c9d48ebe4dc35e27ee4c19 468 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_3952 5500853226c9d48ebe4dc35e27ee4c19 468 SUPERFAMILY SSF55604 6 80 7.19E-22 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_3952 5500853226c9d48ebe4dc35e27ee4c19 468 Pfam PF00367 phosphotransferase system, EIIB 10 40 1.4E-14 T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_4053 5597cf3731e9ce2be6aae64de9497690 525 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 466 513 8.0E-28 T 18-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 CH53_4053 5597cf3731e9ce2be6aae64de9497690 525 Gene3D G3DSA:1.10.10.60 456 514 8.7E-27 T 18-10-2018 CH53_4053 5597cf3731e9ce2be6aae64de9497690 525 Gene3D G3DSA:3.40.50.300 194 377 4.3E-59 T 18-10-2018 CH53_4053 5597cf3731e9ce2be6aae64de9497690 525 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 419 428 - T 18-10-2018 IPR025944 Sigma-54 interaction domain, conserved site CH53_4053 5597cf3731e9ce2be6aae64de9497690 525 SMART SM00091 80 146 2.4E-6 T 18-10-2018 IPR000014 PAS domain CH53_4053 5597cf3731e9ce2be6aae64de9497690 525 SUPERFAMILY SSF46689 459 513 9.86E-10 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_4053 5597cf3731e9ce2be6aae64de9497690 525 SUPERFAMILY SSF52540 206 447 1.14E-61 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4053 5597cf3731e9ce2be6aae64de9497690 525 SUPERFAMILY SSF55785 81 173 2.47E-9 T 18-10-2018 IPR035965 PAS domain superfamily CH53_4053 5597cf3731e9ce2be6aae64de9497690 525 Pfam PF13188 PAS domain 82 123 7.9E-6 T 18-10-2018 IPR000014 PAS domain CH53_4053 5597cf3731e9ce2be6aae64de9497690 525 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 18-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH53_4053 5597cf3731e9ce2be6aae64de9497690 525 Pfam PF00158 Sigma-54 interaction domain 207 372 1.9E-60 T 18-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CH53_4053 5597cf3731e9ce2be6aae64de9497690 525 Gene3D G3DSA:1.10.8.60 378 455 2.0E-18 T 18-10-2018 CH53_4053 5597cf3731e9ce2be6aae64de9497690 525 SMART SM00382 226 370 6.1E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_4053 5597cf3731e9ce2be6aae64de9497690 525 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 292 307 - T 18-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH53_4053 5597cf3731e9ce2be6aae64de9497690 525 Gene3D G3DSA:3.30.450.20 82 190 1.8E-29 T 18-10-2018 CH53_4053 5597cf3731e9ce2be6aae64de9497690 525 Gene3D G3DSA:3.30.70.260 1 81 4.9E-26 T 18-10-2018 CH53_2884 e1f3c47bc417b1340b7d77789e99ca28 245 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2884 e1f3c47bc417b1340b7d77789e99ca28 245 SUPERFAMILY SSF52540 2 210 5.03E-47 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2884 e1f3c47bc417b1340b7d77789e99ca28 245 SMART SM00382 26 207 1.7E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2884 e1f3c47bc417b1340b7d77789e99ca28 245 Pfam PF00005 ABC transporter 22 158 1.8E-26 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2884 e1f3c47bc417b1340b7d77789e99ca28 245 Gene3D G3DSA:3.40.50.300 1 231 2.1E-51 T 18-10-2018 CH53_301 0f9b93f584d038572b2b31f3689bb50a 329 PIRSF PIRSF038896 2 327 1.3E-97 T 18-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 CH53_301 0f9b93f584d038572b2b31f3689bb50a 329 Pfam PF12706 Beta-lactamase superfamily domain 89 286 7.5E-42 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_301 0f9b93f584d038572b2b31f3689bb50a 329 SUPERFAMILY SSF56281 72 292 4.06E-36 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_301 0f9b93f584d038572b2b31f3689bb50a 329 Gene3D G3DSA:3.60.15.10 47 327 2.0E-82 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_239 65854b36364251183da529d5f44fa6c2 430 SUPERFAMILY SSF51569 5 423 4.4E-168 T 18-10-2018 CH53_239 65854b36364251183da529d5f44fa6c2 430 Pfam PF08013 Tagatose 6 phosphate kinase 4 423 1.9E-199 T 18-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CH53_239 65854b36364251183da529d5f44fa6c2 430 PIRSF PIRSF009264 1 428 1.3E-198 T 18-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CH53_239 65854b36364251183da529d5f44fa6c2 430 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 423 3.9E-205 T 18-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CH53_239 65854b36364251183da529d5f44fa6c2 430 Gene3D G3DSA:1.10.400.20 287 423 4.5E-53 T 18-10-2018 CH53_239 65854b36364251183da529d5f44fa6c2 430 Gene3D G3DSA:3.20.20.70 17 286 1.7E-120 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2636 63bc2d2b0328d199c78b8cc58e755c33 238 SUPERFAMILY SSF54423 22 80 3.53E-18 T 18-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CH53_2636 63bc2d2b0328d199c78b8cc58e755c33 238 Gene3D G3DSA:3.40.30.10 71 231 1.2E-51 T 18-10-2018 CH53_2636 63bc2d2b0328d199c78b8cc58e755c33 238 SUPERFAMILY SSF52833 87 231 6.62E-42 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_2636 63bc2d2b0328d199c78b8cc58e755c33 238 Gene3D G3DSA:3.10.450.70 22 70 1.9E-24 T 18-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CH53_2636 63bc2d2b0328d199c78b8cc58e755c33 238 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 18-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CH53_2636 63bc2d2b0328d199c78b8cc58e755c33 238 Pfam PF13098 Thioredoxin-like domain 105 227 4.2E-30 T 18-10-2018 IPR012336 Thioredoxin-like fold CH53_2636 63bc2d2b0328d199c78b8cc58e755c33 238 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 76 1.6E-15 T 18-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CH53_2468 46f24bb0bc04eb68db50cbd2fe2b0882 189 Gene3D G3DSA:2.40.128.130 1 189 6.9E-29 T 18-10-2018 IPR036709 Autotransporter beta-domain superfamily CH53_2468 46f24bb0bc04eb68db50cbd2fe2b0882 189 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 2 189 1.3E-22 T 18-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CH53_2468 46f24bb0bc04eb68db50cbd2fe2b0882 189 SUPERFAMILY SSF103515 2 179 1.31E-18 T 18-10-2018 IPR036709 Autotransporter beta-domain superfamily CH53_2468 46f24bb0bc04eb68db50cbd2fe2b0882 189 Pfam PF03797 Autotransporter beta-domain 2 169 1.2E-20 T 18-10-2018 IPR005546 Autotransporter beta-domain CH53_2428 cd7c0262384d242c113deeed9d6171af 539 Gene3D G3DSA:1.20.58.220 330 527 1.5E-5 T 18-10-2018 IPR038078 PhoU-like domain superfamily CH53_2428 cd7c0262384d242c113deeed9d6171af 539 SUPERFAMILY SSF109755 321 531 8.79E-24 T 18-10-2018 CH53_2428 cd7c0262384d242c113deeed9d6171af 539 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 520 1.3E-109 T 18-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CH53_2428 cd7c0262384d242c113deeed9d6171af 539 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 307 3.3E-103 T 18-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 CH53_2428 cd7c0262384d242c113deeed9d6171af 539 Pfam PF02690 Na+/Pi-cotransporter 13 147 6.6E-34 T 18-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CH53_2428 cd7c0262384d242c113deeed9d6171af 539 Pfam PF02690 Na+/Pi-cotransporter 159 251 2.9E-9 T 18-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CH53_2428 cd7c0262384d242c113deeed9d6171af 539 Pfam PF01895 PhoU domain 340 421 9.8E-6 T 18-10-2018 IPR026022 PhoU domain CH53_4400 118e043956e18f5cace0960f956a7821 208 Gene3D G3DSA:3.30.70.1560 95 195 2.0E-40 T 18-10-2018 CH53_4400 118e043956e18f5cace0960f956a7821 208 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 35 206 8.2E-58 T 18-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CH53_4400 118e043956e18f5cace0960f956a7821 208 Pfam PF00849 RNA pseudouridylate synthase 60 176 7.2E-12 T 18-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_4400 118e043956e18f5cace0960f956a7821 208 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 66 80 - T 18-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CH53_4400 118e043956e18f5cace0960f956a7821 208 SUPERFAMILY SSF55120 30 205 1.33E-40 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_4400 118e043956e18f5cace0960f956a7821 208 Gene3D G3DSA:3.30.70.580 19 94 2.9E-27 T 18-10-2018 CH53_413 170b1d111fd328f4278be0a4813f5230 336 Gene3D G3DSA:3.30.360.10 130 314 2.4E-109 T 18-10-2018 CH53_413 170b1d111fd328f4278be0a4813f5230 336 SUPERFAMILY SSF55347 132 318 8.73E-51 T 18-10-2018 CH53_413 170b1d111fd328f4278be0a4813f5230 336 Gene3D G3DSA:3.40.50.720 7 328 2.4E-109 T 18-10-2018 CH53_413 170b1d111fd328f4278be0a4813f5230 336 SMART SM00859 6 121 4.1E-35 T 18-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CH53_413 170b1d111fd328f4278be0a4813f5230 336 SUPERFAMILY SSF51735 5 156 3.62E-45 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_413 170b1d111fd328f4278be0a4813f5230 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 316 2.7E-34 T 18-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CH53_413 170b1d111fd328f4278be0a4813f5230 336 PIRSF PIRSF000148 4 336 3.8E-97 T 18-10-2018 CH53_413 170b1d111fd328f4278be0a4813f5230 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 5.8E-27 T 18-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CH53_2584 b2cfd4530c1af283da69a0e7b7acfc58 96 SMART SM01152 7 83 2.0E-37 T 18-10-2018 IPR003746 Protein of unknown function DUF167 CH53_2584 b2cfd4530c1af283da69a0e7b7acfc58 96 SUPERFAMILY SSF69786 9 95 8.24E-32 T 18-10-2018 IPR036591 YggU-like superfamily CH53_2584 b2cfd4530c1af283da69a0e7b7acfc58 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 81 3.4E-26 T 18-10-2018 IPR003746 Protein of unknown function DUF167 CH53_2584 b2cfd4530c1af283da69a0e7b7acfc58 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 91 1.2E-31 T 18-10-2018 IPR005228 Conserved hypothetical protein CHP00251 CH53_2584 b2cfd4530c1af283da69a0e7b7acfc58 96 Gene3D G3DSA:3.30.1200.10 1 96 1.5E-36 T 18-10-2018 IPR036591 YggU-like superfamily CH53_2584 b2cfd4530c1af283da69a0e7b7acfc58 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 93 20.31 T 18-10-2018 IPR003746 Protein of unknown function DUF167 CH53_3958 59128189ab7b9a11a385e4a9878db455 216 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 150 1.1E-7 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_3958 59128189ab7b9a11a385e4a9878db455 216 Gene3D G3DSA:2.160.10.10 1 215 3.3E-76 T 18-10-2018 CH53_3958 59128189ab7b9a11a385e4a9878db455 216 SUPERFAMILY SSF51161 14 205 6.93E-45 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily CH53_2106 54d7e0263ab0953383e437da5497dc93 234 Gene3D G3DSA:3.30.2170.10 1 215 1.1E-80 T 18-10-2018 CH53_2106 54d7e0263ab0953383e437da5497dc93 234 Hamap MF_00801 Endonuclease V [nfi]. 3 217 33.373 T 18-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 CH53_2106 54d7e0263ab0953383e437da5497dc93 234 Pfam PF04493 Endonuclease V 17 207 1.0E-70 T 18-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 CH53_944 1721836ae69d38a2b21e6a2d3d1a98dc 576 SUPERFAMILY SSF55124 13 142 1.13E-25 T 18-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_944 1721836ae69d38a2b21e6a2d3d1a98dc 576 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 329 3.3E-46 T 18-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_944 1721836ae69d38a2b21e6a2d3d1a98dc 576 SUPERFAMILY SSF55124 346 422 1.18E-21 T 18-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_944 1721836ae69d38a2b21e6a2d3d1a98dc 576 Gene3D G3DSA:3.30.413.10 141 348 8.2E-90 T 18-10-2018 CH53_944 1721836ae69d38a2b21e6a2d3d1a98dc 576 Gene3D G3DSA:3.90.480.20 17 417 8.2E-90 T 18-10-2018 CH53_944 1721836ae69d38a2b21e6a2d3d1a98dc 576 SUPERFAMILY SSF56014 429 561 5.37E-36 T 18-10-2018 CH53_944 1721836ae69d38a2b21e6a2d3d1a98dc 576 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 80 139 6.2E-13 T 18-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_944 1721836ae69d38a2b21e6a2d3d1a98dc 576 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 417 1.0E-14 T 18-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_944 1721836ae69d38a2b21e6a2d3d1a98dc 576 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 431 558 7.0E-4 T 18-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_944 1721836ae69d38a2b21e6a2d3d1a98dc 576 PRINTS PR00397 Sirohaem Fe-binding site signature 478 496 2.7E-8 T 18-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_944 1721836ae69d38a2b21e6a2d3d1a98dc 576 PRINTS PR00397 Sirohaem Fe-binding site signature 430 448 2.7E-8 T 18-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_944 1721836ae69d38a2b21e6a2d3d1a98dc 576 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 559 6.7E-289 T 18-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_944 1721836ae69d38a2b21e6a2d3d1a98dc 576 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 571 58.464 T 18-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_944 1721836ae69d38a2b21e6a2d3d1a98dc 576 Gene3D G3DSA:3.30.413.10 426 568 3.6E-36 T 18-10-2018 CH53_944 1721836ae69d38a2b21e6a2d3d1a98dc 576 SUPERFAMILY SSF56014 150 344 9.81E-59 T 18-10-2018 CH53_944 1721836ae69d38a2b21e6a2d3d1a98dc 576 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 478 494 - T 18-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CH53_779 cbbd3a1e9515ffa8156e53b703f24793 588 Pfam PF00535 Glycosyl transferase family 2 9 130 7.1E-16 T 18-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CH53_779 cbbd3a1e9515ffa8156e53b703f24793 588 Gene3D G3DSA:3.90.550.10 9 260 3.2E-25 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_779 cbbd3a1e9515ffa8156e53b703f24793 588 SUPERFAMILY SSF53448 9 239 2.6E-28 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_4076 db5871e156cf23eb4cd497b4090334e3 87 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 1 87 3.0E-41 T 18-10-2018 IPR020317 Uncharacterised protein family YjbD CH53_4076 db5871e156cf23eb4cd497b4090334e3 87 Pfam PF11656 YjbD family (DUF3811) 1 87 1.8E-38 T 18-10-2018 IPR020317 Uncharacterised protein family YjbD CH53_479 996c96d59ebbdd6daa9b8bfb29309ca6 196 SUPERFAMILY SSF48498 92 190 2.42E-17 T 18-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH53_479 996c96d59ebbdd6daa9b8bfb29309ca6 196 Gene3D G3DSA:1.10.357.10 6 196 6.8E-27 T 18-10-2018 CH53_479 996c96d59ebbdd6daa9b8bfb29309ca6 196 SUPERFAMILY SSF46689 4 69 2.92E-12 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_479 996c96d59ebbdd6daa9b8bfb29309ca6 196 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 91 189 1.4E-6 T 18-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal CH53_479 996c96d59ebbdd6daa9b8bfb29309ca6 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 51 2.7E-10 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_3913 b26e299e0838f23db83247963d654b0f 255 SMART SM00014 78 227 2.4E-35 T 18-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CH53_3913 b26e299e0838f23db83247963d654b0f 255 SUPERFAMILY SSF48317 8 240 6.28E-30 T 18-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CH53_3913 b26e299e0838f23db83247963d654b0f 255 Gene3D G3DSA:1.20.144.10 2 255 3.0E-77 T 18-10-2018 CH53_3913 b26e299e0838f23db83247963d654b0f 255 Pfam PF01569 PAP2 superfamily 80 232 5.6E-28 T 18-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CH53_2110 555224451d665222874c48b5538f05c3 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 43.638 T 18-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CH53_2110 555224451d665222874c48b5538f05c3 428 SUPERFAMILY SSF52440 1 103 3.45E-35 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CH53_2110 555224451d665222874c48b5538f05c3 428 SUPERFAMILY SSF51246 329 425 8.89E-34 T 18-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CH53_2110 555224451d665222874c48b5538f05c3 428 Gene3D G3DSA:3.30.1490.20 122 190 6.6E-28 T 18-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CH53_2110 555224451d665222874c48b5538f05c3 428 Gene3D G3DSA:3.90.600.10 330 425 3.1E-36 T 18-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CH53_2110 555224451d665222874c48b5538f05c3 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 422 1.3E-29 T 18-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CH53_2110 555224451d665222874c48b5538f05c3 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.5E-33 T 18-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CH53_2110 555224451d665222874c48b5538f05c3 428 Gene3D G3DSA:3.30.470.20 191 329 2.0E-61 T 18-10-2018 CH53_2110 555224451d665222874c48b5538f05c3 428 SUPERFAMILY SSF56059 104 323 4.42E-69 T 18-10-2018 CH53_2110 555224451d665222874c48b5538f05c3 428 Gene3D G3DSA:3.40.50.20 2 95 4.7E-36 T 18-10-2018 CH53_2110 555224451d665222874c48b5538f05c3 428 SMART SM01210 330 424 1.2E-56 T 18-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CH53_2110 555224451d665222874c48b5538f05c3 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 18-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CH53_2110 555224451d665222874c48b5538f05c3 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 424 3.7E-182 T 18-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CH53_2110 555224451d665222874c48b5538f05c3 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 9.5E-84 T 18-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CH53_2110 555224451d665222874c48b5538f05c3 428 SMART SM01209 103 296 1.2E-141 T 18-10-2018 CH53_345 3f354ffa452b0188d939339832f06246 1814 SUPERFAMILY SSF49785 1295 1414 7.65E-24 T 18-10-2018 IPR008979 Galactose-binding-like domain superfamily CH53_345 3f354ffa452b0188d939339832f06246 1814 Pfam PF00082 Subtilase family 987 1243 6.1E-24 T 18-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CH53_345 3f354ffa452b0188d939339832f06246 1814 SUPERFAMILY SSF51120 573 716 1.99E-18 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CH53_345 3f354ffa452b0188d939339832f06246 1814 SUPERFAMILY SSF52743 937 1271 1.96E-50 T 18-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CH53_345 3f354ffa452b0188d939339832f06246 1814 Gene3D G3DSA:2.60.120.260 1272 1418 2.3E-23 T 18-10-2018 IPR008979 Galactose-binding-like domain superfamily CH53_345 3f354ffa452b0188d939339832f06246 1814 Gene3D G3DSA:3.40.50.200 925 1271 3.7E-60 T 18-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CH53_345 3f354ffa452b0188d939339832f06246 1814 Pfam PF01483 Proprotein convertase P-domain 1312 1409 1.3E-20 T 18-10-2018 IPR002884 P domain GO:0004252|GO:0006508 CH53_345 3f354ffa452b0188d939339832f06246 1814 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 1189 1199 - T 18-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site CH53_345 3f354ffa452b0188d939339832f06246 1814 Gene3D G3DSA:2.150.10.10 566 650 1.2E-7 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CH53_345 3f354ffa452b0188d939339832f06246 1814 Gene3D G3DSA:2.150.10.10 651 721 1.0E-8 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CH53_345 3f354ffa452b0188d939339832f06246 1814 Gene3D G3DSA:2.150.10.10 722 831 3.5E-6 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CH53_345 3f354ffa452b0188d939339832f06246 1814 SUPERFAMILY SSF51120 694 812 1.83E-10 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CH53_345 3f354ffa452b0188d939339832f06246 1814 Gene3D G3DSA:2.150.10.10 1474 1598 2.1E-13 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CH53_345 3f354ffa452b0188d939339832f06246 1814 SUPERFAMILY SSF51120 1448 1597 9.68E-17 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CH53_2356 8339d9960f9d5695accd9c3e9e6c7520 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.8E-15 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2356 8339d9960f9d5695accd9c3e9e6c7520 300 SUPERFAMILY SSF53850 91 298 2.95E-37 T 18-10-2018 CH53_2356 8339d9960f9d5695accd9c3e9e6c7520 300 SUPERFAMILY SSF46785 2 112 6.09E-20 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2356 8339d9960f9d5695accd9c3e9e6c7520 300 Pfam PF03466 LysR substrate binding domain 89 297 3.3E-33 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_2356 8339d9960f9d5695accd9c3e9e6c7520 300 Gene3D G3DSA:1.10.10.10 1 85 7.3E-19 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2356 8339d9960f9d5695accd9c3e9e6c7520 300 Gene3D G3DSA:3.40.190.10 92 296 5.5E-50 T 18-10-2018 CH53_2356 8339d9960f9d5695accd9c3e9e6c7520 300 Gene3D G3DSA:3.40.190.10 166 271 5.5E-50 T 18-10-2018 CH53_1870 5dbaa58b308390864e882c06ee4362e6 343 SUPERFAMILY SSF88713 24 238 1.82E-72 T 18-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CH53_1870 5dbaa58b308390864e882c06ee4362e6 343 Pfam PF04748 Divergent polysaccharide deacetylase 28 238 8.0E-78 T 18-10-2018 IPR006837 Divergent polysaccharide deacetylase CH53_1870 5dbaa58b308390864e882c06ee4362e6 343 Gene3D G3DSA:3.20.20.370 22 239 7.9E-75 T 18-10-2018 CH53_3559 f1112f6012a21cca268c6e604748421e 313 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 161 295 2.2E-20 T 18-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CH53_3559 f1112f6012a21cca268c6e604748421e 313 PRINTS PR01002 Flagellar protein FlgJ signature 295 312 1.0E-104 T 18-10-2018 CH53_3559 f1112f6012a21cca268c6e604748421e 313 PRINTS PR01002 Flagellar protein FlgJ signature 277 295 1.0E-104 T 18-10-2018 CH53_3559 f1112f6012a21cca268c6e604748421e 313 PRINTS PR01002 Flagellar protein FlgJ signature 27 50 1.0E-104 T 18-10-2018 CH53_3559 f1112f6012a21cca268c6e604748421e 313 PRINTS PR01002 Flagellar protein FlgJ signature 147 170 1.0E-104 T 18-10-2018 CH53_3559 f1112f6012a21cca268c6e604748421e 313 PRINTS PR01002 Flagellar protein FlgJ signature 110 135 1.0E-104 T 18-10-2018 CH53_3559 f1112f6012a21cca268c6e604748421e 313 PRINTS PR01002 Flagellar protein FlgJ signature 171 189 1.0E-104 T 18-10-2018 CH53_3559 f1112f6012a21cca268c6e604748421e 313 PRINTS PR01002 Flagellar protein FlgJ signature 213 234 1.0E-104 T 18-10-2018 CH53_3559 f1112f6012a21cca268c6e604748421e 313 PRINTS PR01002 Flagellar protein FlgJ signature 52 72 1.0E-104 T 18-10-2018 CH53_3559 f1112f6012a21cca268c6e604748421e 313 PRINTS PR01002 Flagellar protein FlgJ signature 191 212 1.0E-104 T 18-10-2018 CH53_3559 f1112f6012a21cca268c6e604748421e 313 PRINTS PR01002 Flagellar protein FlgJ signature 5 25 1.0E-104 T 18-10-2018 CH53_3559 f1112f6012a21cca268c6e604748421e 313 PRINTS PR01002 Flagellar protein FlgJ signature 235 256 1.0E-104 T 18-10-2018 CH53_3559 f1112f6012a21cca268c6e604748421e 313 PRINTS PR01002 Flagellar protein FlgJ signature 257 276 1.0E-104 T 18-10-2018 CH53_3559 f1112f6012a21cca268c6e604748421e 313 Gene3D G3DSA:1.10.530.10 152 292 1.6E-45 T 18-10-2018 CH53_3559 f1112f6012a21cca268c6e604748421e 313 Gene3D G3DSA:2.10.70.40 186 238 1.6E-45 T 18-10-2018 CH53_3559 f1112f6012a21cca268c6e604748421e 313 SMART SM00047 142 306 1.8E-47 T 18-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CH53_3559 f1112f6012a21cca268c6e604748421e 313 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 11 295 1.8E-110 T 18-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 CH53_3559 f1112f6012a21cca268c6e604748421e 313 Pfam PF10135 Rod binding protein 49 95 1.7E-16 T 18-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal CH53_1041 7f5cd6fe492e38438a5740a0571ca642 420 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 22 402 1.1E-156 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_1041 7f5cd6fe492e38438a5740a0571ca642 420 PRINTS PR00166 Aromatic amino acid permease signature 200 222 4.1E-104 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_1041 7f5cd6fe492e38438a5740a0571ca642 420 PRINTS PR00166 Aromatic amino acid permease signature 300 319 4.1E-104 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_1041 7f5cd6fe492e38438a5740a0571ca642 420 PRINTS PR00166 Aromatic amino acid permease signature 334 352 4.1E-104 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_1041 7f5cd6fe492e38438a5740a0571ca642 420 PRINTS PR00166 Aromatic amino acid permease signature 52 71 4.1E-104 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_1041 7f5cd6fe492e38438a5740a0571ca642 420 PRINTS PR00166 Aromatic amino acid permease signature 355 374 4.1E-104 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_1041 7f5cd6fe492e38438a5740a0571ca642 420 PRINTS PR00166 Aromatic amino acid permease signature 97 117 4.1E-104 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_1041 7f5cd6fe492e38438a5740a0571ca642 420 PRINTS PR00166 Aromatic amino acid permease signature 239 258 4.1E-104 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_1041 7f5cd6fe492e38438a5740a0571ca642 420 PRINTS PR00166 Aromatic amino acid permease signature 25 48 4.1E-104 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_1041 7f5cd6fe492e38438a5740a0571ca642 420 PRINTS PR00166 Aromatic amino acid permease signature 162 182 4.1E-104 T 18-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CH53_1041 7f5cd6fe492e38438a5740a0571ca642 420 Pfam PF03222 Tryptophan/tyrosine permease family 16 409 3.0E-151 T 18-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CH53_1041 7f5cd6fe492e38438a5740a0571ca642 420 Gene3D G3DSA:1.20.1740.10 13 319 2.1E-5 T 18-10-2018 CH53_1120 677e58d6043947cb18aada6c92991175 278 Pfam PF01026 TatD related DNase 18 269 1.1E-63 T 18-10-2018 IPR001130 TatD family GO:0016788 CH53_1120 677e58d6043947cb18aada6c92991175 278 SUPERFAMILY SSF51556 17 271 5.8E-74 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_1120 677e58d6043947cb18aada6c92991175 278 Gene3D G3DSA:3.20.20.140 15 271 3.0E-83 T 18-10-2018 CH53_1120 677e58d6043947cb18aada6c92991175 278 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 17 25 - T 18-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CH53_1120 677e58d6043947cb18aada6c92991175 278 PIRSF PIRSF005902 7 273 9.0E-67 T 18-10-2018 IPR001130 TatD family GO:0016788 CH53_4146 6ca375dde3164bd2f601b4fc92723eb9 116 SUPERFAMILY SSF55200 23 115 5.36E-33 T 18-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 CH53_4146 6ca375dde3164bd2f601b4fc92723eb9 116 Gene3D G3DSA:3.30.110.10 14 116 5.9E-38 T 18-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 CH53_4146 6ca375dde3164bd2f601b4fc92723eb9 116 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 24 113 3.0E-36 T 18-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CH53_4146 6ca375dde3164bd2f601b4fc92723eb9 116 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 115 2.0E-46 T 18-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CH53_2832 08fcff7b87d60b3db3c4165a9a414742 374 Gene3D G3DSA:3.20.20.105 1 367 4.9E-170 T 18-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CH53_2832 08fcff7b87d60b3db3c4165a9a414742 374 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 1.3E-92 T 18-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CH53_2832 08fcff7b87d60b3db3c4165a9a414742 374 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 367 1.7E-178 T 18-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CH53_2832 08fcff7b87d60b3db3c4165a9a414742 374 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 3.2E-189 T 18-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CH53_2832 08fcff7b87d60b3db3c4165a9a414742 374 SUPERFAMILY SSF51713 2 364 5.89E-163 T 18-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CH53_2832 08fcff7b87d60b3db3c4165a9a414742 374 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 57.342 T 18-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CH53_218 a072700d26c8fc5e63c4d32d4e526bfe 381 PIRSF PIRSF001434 1 381 3.1E-147 T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CH53_218 a072700d26c8fc5e63c4d32d4e526bfe 381 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CH53_218 a072700d26c8fc5e63c4d32d4e526bfe 381 Gene3D G3DSA:3.90.1150.10 248 381 1.5E-57 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_218 a072700d26c8fc5e63c4d32d4e526bfe 381 Gene3D G3DSA:3.40.640.10 2 247 1.5E-92 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_218 a072700d26c8fc5e63c4d32d4e526bfe 381 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 379 4.1E-153 T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CH53_218 a072700d26c8fc5e63c4d32d4e526bfe 381 SUPERFAMILY SSF53383 15 380 3.71E-115 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_15 6b2e618ba89a970ca88532a60f815043 95 Gene3D G3DSA:3.30.70.100 1 95 3.6E-28 T 18-10-2018 CH53_15 6b2e618ba89a970ca88532a60f815043 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 77 7.7E-16 T 18-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CH53_15 6b2e618ba89a970ca88532a60f815043 95 SUPERFAMILY SSF54909 3 90 7.02E-26 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_1744 9aef4e46a58a065b0ed611fce41e49bc 205 ProSitePatterns PS00622 LuxR-type HTH domain signature. 155 182 - T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1744 9aef4e46a58a065b0ed611fce41e49bc 205 Pfam PF00072 Response regulator receiver domain 5 114 3.6E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1744 9aef4e46a58a065b0ed611fce41e49bc 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 4.1E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1744 9aef4e46a58a065b0ed611fce41e49bc 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 4.1E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1744 9aef4e46a58a065b0ed611fce41e49bc 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 4.1E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1744 9aef4e46a58a065b0ed611fce41e49bc 205 SUPERFAMILY SSF52172 3 158 4.84E-35 T 18-10-2018 IPR011006 CheY-like superfamily CH53_1744 9aef4e46a58a065b0ed611fce41e49bc 205 Gene3D G3DSA:3.40.50.2300 1 129 6.3E-38 T 18-10-2018 CH53_1744 9aef4e46a58a065b0ed611fce41e49bc 205 Gene3D G3DSA:1.10.10.10 130 196 1.2E-19 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1744 9aef4e46a58a065b0ed611fce41e49bc 205 SMART SM00421 138 195 1.1E-17 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1744 9aef4e46a58a065b0ed611fce41e49bc 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 193 7.2E-19 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1744 9aef4e46a58a065b0ed611fce41e49bc 205 SMART SM00448 3 114 1.2E-30 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_723 1872b6bab0129038cba57af74adc8985 352 Pfam PF03824 High-affinity nickel-transport protein 48 338 4.2E-90 T 18-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CH53_723 1872b6bab0129038cba57af74adc8985 352 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 52 333 7.9E-127 T 18-10-2018 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 CH53_619 660670ea9d4ec3fdc750032e1fa49831 680 Gene3D G3DSA:2.60.20.10 18 116 9.3E-14 T 18-10-2018 CH53_619 660670ea9d4ec3fdc750032e1fa49831 680 SUPERFAMILY SSF49695 26 115 6.22E-5 T 18-10-2018 IPR011024 Gamma-crystallin-like CH53_1948 12394a6f31fbfd203ea0b4889e114a33 112 Pfam PF04219 Protein of unknown function, DUF 10 98 4.1E-39 T 18-10-2018 IPR007335 Protein of unknown function DUF413 CH53_2092 04aa5f3fa7145e3b831f5cb5ee16bf4c 234 SUPERFAMILY SSF56808 6 225 3.14E-82 T 18-10-2018 IPR023674 Ribosomal protein L1-like CH53_2092 04aa5f3fa7145e3b831f5cb5ee16bf4c 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 1.6E-106 T 18-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CH53_2092 04aa5f3fa7145e3b831f5cb5ee16bf4c 234 Gene3D G3DSA:3.40.50.790 68 159 3.2E-80 T 18-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CH53_2092 04aa5f3fa7145e3b831f5cb5ee16bf4c 234 PIRSF PIRSF002155 1 227 1.8E-77 T 18-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_2092 04aa5f3fa7145e3b831f5cb5ee16bf4c 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.278 T 18-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CH53_2092 04aa5f3fa7145e3b831f5cb5ee16bf4c 234 Gene3D G3DSA:3.30.190.20 25 222 3.2E-80 T 18-10-2018 CH53_2092 04aa5f3fa7145e3b831f5cb5ee16bf4c 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 18-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_2092 04aa5f3fa7145e3b831f5cb5ee16bf4c 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 4.5E-51 T 18-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CH53_1626 ae57d7c6bb5ddb1dbb2af47f92af56aa 234 SUPERFAMILY SSF56935 52 234 1.77E-8 T 18-10-2018 CH53_1626 ae57d7c6bb5ddb1dbb2af47f92af56aa 234 Gene3D G3DSA:2.40.160.40 21 234 1.3E-73 T 18-10-2018 CH53_1626 ae57d7c6bb5ddb1dbb2af47f92af56aa 234 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 14 234 7.7E-77 T 18-10-2018 IPR009331 Oligogalacturonate-specific porin CH53_378 f6fd2f6d0651d7f75c7f66b86cdfc713 455 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 61 233 4.5E-50 T 18-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_378 f6fd2f6d0651d7f75c7f66b86cdfc713 455 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 348 430 3.0E-26 T 18-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_378 f6fd2f6d0651d7f75c7f66b86cdfc713 455 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 20 432 4.8E-199 T 18-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_378 f6fd2f6d0651d7f75c7f66b86cdfc713 455 SMART SM00928 345 390 2.0E-21 T 18-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_378 f6fd2f6d0651d7f75c7f66b86cdfc713 455 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 358 369 - T 18-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_378 f6fd2f6d0651d7f75c7f66b86cdfc713 455 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 181 196 - T 18-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_378 f6fd2f6d0651d7f75c7f66b86cdfc713 455 Gene3D G3DSA:3.40.50.11540 66 245 3.0E-78 T 18-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_378 f6fd2f6d0651d7f75c7f66b86cdfc713 455 SUPERFAMILY SSF140490 343 435 4.58E-31 T 18-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_378 f6fd2f6d0651d7f75c7f66b86cdfc713 455 Gene3D G3DSA:3.10.20.600 248 342 5.6E-28 T 18-10-2018 CH53_378 f6fd2f6d0651d7f75c7f66b86cdfc713 455 Gene3D G3DSA:1.20.1440.230 343 443 1.1E-27 T 18-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_378 f6fd2f6d0651d7f75c7f66b86cdfc713 455 SUPERFAMILY SSF142019 23 252 9.68E-85 T 18-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_378 f6fd2f6d0651d7f75c7f66b86cdfc713 455 SUPERFAMILY SSF142984 257 339 1.1E-21 T 18-10-2018 CH53_4239 6d04a3395e0dc25e05d49b72d886ef30 494 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 358 378 - T 18-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_4239 6d04a3395e0dc25e05d49b72d886ef30 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 445 4.2E-23 T 18-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CH53_4239 6d04a3395e0dc25e05d49b72d886ef30 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 249 1.6E-78 T 18-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CH53_4239 6d04a3395e0dc25e05d49b72d886ef30 494 PIRSF PIRSF000538 1 493 9.5E-95 T 18-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_4239 6d04a3395e0dc25e05d49b72d886ef30 494 Gene3D G3DSA:3.30.420.40 1 240 4.4E-67 T 18-10-2018 CH53_4239 6d04a3395e0dc25e05d49b72d886ef30 494 SUPERFAMILY SSF53067 3 251 8.03E-62 T 18-10-2018 CH53_4239 6d04a3395e0dc25e05d49b72d886ef30 494 SUPERFAMILY SSF53067 253 492 1.62E-51 T 18-10-2018 CH53_4239 6d04a3395e0dc25e05d49b72d886ef30 494 Gene3D G3DSA:3.30.420.40 242 494 6.7E-53 T 18-10-2018 CH53_2103 a0f0639b70ac5d617d43c64f3de214bf 167 Hamap MF_01181 Regulator of sigma D [rsd]. 1 153 41.033 T 18-10-2018 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd CH53_2103 a0f0639b70ac5d617d43c64f3de214bf 167 PIRSF PIRSF016548 1 161 7.7E-54 T 18-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 CH53_2103 a0f0639b70ac5d617d43c64f3de214bf 167 Gene3D G3DSA:1.20.120.1370 1 152 5.4E-55 T 18-10-2018 IPR038309 Rsd/AlgQ superfamily CH53_2103 a0f0639b70ac5d617d43c64f3de214bf 167 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 149 7.1E-58 T 18-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 CH53_3801 be4580e1a0d14dd5a7ea444c404a3523 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 32.472 T 18-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CH53_3801 be4580e1a0d14dd5a7ea444c404a3523 204 SUPERFAMILY SSF50249 2 63 1.31E-17 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_3801 be4580e1a0d14dd5a7ea444c404a3523 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 4.3E-18 T 18-10-2018 CH53_3801 be4580e1a0d14dd5a7ea444c404a3523 204 Gene3D G3DSA:2.40.50.140 1 66 1.7E-25 T 18-10-2018 CH53_3801 be4580e1a0d14dd5a7ea444c404a3523 204 Gene3D G3DSA:1.10.150.20 67 142 1.3E-30 T 18-10-2018 CH53_3801 be4580e1a0d14dd5a7ea444c404a3523 204 SMART SM00278 108 127 0.15 T 18-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CH53_3801 be4580e1a0d14dd5a7ea444c404a3523 204 SMART SM00278 73 92 0.054 T 18-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CH53_3801 be4580e1a0d14dd5a7ea444c404a3523 204 SUPERFAMILY SSF46929 159 202 5.23E-10 T 18-10-2018 IPR036267 RuvA, C-terminal domain superfamily CH53_3801 be4580e1a0d14dd5a7ea444c404a3523 204 Pfam PF07499 RuvA, C-terminal domain 161 202 7.5E-14 T 18-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CH53_3801 be4580e1a0d14dd5a7ea444c404a3523 204 Pfam PF01330 RuvA N terminal domain 2 62 6.8E-18 T 18-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CH53_3801 be4580e1a0d14dd5a7ea444c404a3523 204 Gene3D G3DSA:1.10.8.10 157 204 5.3E-23 T 18-10-2018 CH53_3801 be4580e1a0d14dd5a7ea444c404a3523 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 204 1.0E-66 T 18-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CH53_3801 be4580e1a0d14dd5a7ea444c404a3523 204 SUPERFAMILY SSF47781 66 136 4.94E-23 T 18-10-2018 IPR010994 RuvA domain 2-like CH53_1163 b188d99914ad7073056c0737c191f0af 339 SUPERFAMILY SSF53822 26 339 7.07E-83 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_1163 b188d99914ad7073056c0737c191f0af 339 Gene3D G3DSA:3.40.50.2300 29 299 4.4E-110 T 18-10-2018 CH53_1163 b188d99914ad7073056c0737c191f0af 339 Gene3D G3DSA:3.40.50.2300 129 265 4.4E-110 T 18-10-2018 CH53_1163 b188d99914ad7073056c0737c191f0af 339 Pfam PF13407 Periplasmic binding protein domain 29 284 3.9E-54 T 18-10-2018 IPR025997 Periplasmic binding protein CH53_4275 05d8bdc5bdfd572e5d75671541e50f96 686 Gene3D G3DSA:3.90.226.10 338 544 3.6E-51 T 18-10-2018 CH53_4275 05d8bdc5bdfd572e5d75671541e50f96 686 SMART SM00228 245 322 3.7E-10 T 18-10-2018 IPR001478 PDZ domain GO:0005515 CH53_4275 05d8bdc5bdfd572e5d75671541e50f96 686 Gene3D G3DSA:2.30.42.10 245 337 2.7E-16 T 18-10-2018 CH53_4275 05d8bdc5bdfd572e5d75671541e50f96 686 SMART SM00245 325 530 1.3E-80 T 18-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CH53_4275 05d8bdc5bdfd572e5d75671541e50f96 686 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 196 550 8.5E-126 T 18-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CH53_4275 05d8bdc5bdfd572e5d75671541e50f96 686 SUPERFAMILY SSF52096 166 534 1.99E-69 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CH53_4275 05d8bdc5bdfd572e5d75671541e50f96 686 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 319 1.9E-14 T 18-10-2018 IPR001478 PDZ domain GO:0005515 CH53_4275 05d8bdc5bdfd572e5d75671541e50f96 686 Pfam PF03572 Peptidase family S41 355 528 1.3E-52 T 18-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CH53_4275 05d8bdc5bdfd572e5d75671541e50f96 686 SUPERFAMILY SSF50156 215 346 1.02E-16 T 18-10-2018 IPR036034 PDZ superfamily GO:0005515 CH53_4275 05d8bdc5bdfd572e5d75671541e50f96 686 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 533 666 3.6E-42 T 18-10-2018 IPR020992 Tail specific protease, C-terminal CH53_1104 2a82fcb3e2b31e54c64bc18c945bce5a 418 SUPERFAMILY SSF51658 5 418 1.96E-83 T 18-10-2018 IPR036237 Xylose isomerase-like superfamily CH53_1104 2a82fcb3e2b31e54c64bc18c945bce5a 418 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 9 418 0.0 T 18-10-2018 CH53_1104 2a82fcb3e2b31e54c64bc18c945bce5a 418 Gene3D G3DSA:3.20.20.150 1 418 3.3E-187 T 18-10-2018 CH53_1104 2a82fcb3e2b31e54c64bc18c945bce5a 418 Pfam PF06134 L-rhamnose isomerase (RhaA) 4 418 1.6E-227 T 18-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 CH53_1104 2a82fcb3e2b31e54c64bc18c945bce5a 418 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 5 418 1.1E-234 T 18-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 CH53_1104 2a82fcb3e2b31e54c64bc18c945bce5a 418 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 418 274.149 T 18-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 CH53_2834 dcbf291d75cb75572bf3e20c31a7190a 604 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 112 590 7.1E-151 T 18-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CH53_2834 dcbf291d75cb75572bf3e20c31a7190a 604 Pfam PF02355 Protein export membrane protein 422 590 1.3E-16 T 18-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CH53_2834 dcbf291d75cb75572bf3e20c31a7190a 604 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 604 48.119 T 18-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CH53_2834 dcbf291d75cb75572bf3e20c31a7190a 604 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 334 583 2.4E-84 T 18-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CH53_2834 dcbf291d75cb75572bf3e20c31a7190a 604 SUPERFAMILY SSF82866 399 595 1.03E-41 T 18-10-2018 CH53_2834 dcbf291d75cb75572bf3e20c31a7190a 604 Gene3D G3DSA:3.30.70.3400 211 426 1.2E-49 T 18-10-2018 CH53_2834 dcbf291d75cb75572bf3e20c31a7190a 604 Pfam PF13721 SecD export protein N-terminal TM region 1 92 4.0E-28 T 18-10-2018 IPR027398 SecD export protein N-terminal TM domain CH53_2834 dcbf291d75cb75572bf3e20c31a7190a 604 Pfam PF07549 SecD/SecF GG Motif 109 129 5.0E-6 T 18-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CH53_2834 dcbf291d75cb75572bf3e20c31a7190a 604 Gene3D G3DSA:3.30.1360.200 267 420 1.2E-49 T 18-10-2018 CH53_485 eebc6d7397f51b5c7c80452958bece14 349 Gene3D G3DSA:3.40.50.300 2 281 2.0E-68 T 18-10-2018 CH53_485 eebc6d7397f51b5c7c80452958bece14 349 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_485 eebc6d7397f51b5c7c80452958bece14 349 SUPERFAMILY SSF52540 4 239 4.4E-70 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_485 eebc6d7397f51b5c7c80452958bece14 349 Pfam PF00005 ABC transporter 19 163 9.7E-35 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_485 eebc6d7397f51b5c7c80452958bece14 349 SMART SM00382 28 213 2.9E-16 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3552 8367b0f669117645191dbf42892e1be1 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 18-10-2018 IPR019776 Flagellar basal body rod protein, conserved site CH53_3552 8367b0f669117645191dbf42892e1be1 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 6.4E-11 T 18-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH53_3552 8367b0f669117645191dbf42892e1be1 134 Pfam PF00460 Flagella basal body rod protein 7 37 3.3E-9 T 18-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CH53_3552 8367b0f669117645191dbf42892e1be1 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 2.0E-50 T 18-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CH53_3341 1180c3480456bbe92367953168859be7 369 SUPERFAMILY SSF51735 2 279 8.62E-33 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3341 1180c3480456bbe92367953168859be7 369 Pfam PF07993 Male sterility protein 6 237 3.7E-33 T 18-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 CH53_3341 1180c3480456bbe92367953168859be7 369 Gene3D G3DSA:3.40.50.720 1 319 3.7E-47 T 18-10-2018 CH53_1074 5b387af83c254fe1845fc4ea7d92c942 297 Pfam PF03466 LysR substrate binding domain 96 286 2.8E-11 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_1074 5b387af83c254fe1845fc4ea7d92c942 297 SUPERFAMILY SSF53850 92 288 6.65E-26 T 18-10-2018 CH53_1074 5b387af83c254fe1845fc4ea7d92c942 297 Gene3D G3DSA:3.40.190.10 97 283 1.3E-7 T 18-10-2018 CH53_1074 5b387af83c254fe1845fc4ea7d92c942 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 5.3E-17 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1074 5b387af83c254fe1845fc4ea7d92c942 297 Gene3D G3DSA:1.10.10.10 3 93 1.4E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1074 5b387af83c254fe1845fc4ea7d92c942 297 SUPERFAMILY SSF46785 2 85 2.18E-19 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1074 5b387af83c254fe1845fc4ea7d92c942 297 Gene3D G3DSA:3.40.190.10 169 266 1.3E-7 T 18-10-2018 CH53_4050 18b14bc1ebbfbe6fcc13d42ad2ccca20 320 SUPERFAMILY SSF54826 2 107 1.3E-27 T 18-10-2018 CH53_4050 18b14bc1ebbfbe6fcc13d42ad2ccca20 320 SUPERFAMILY SSF51604 115 316 5.76E-52 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CH53_4050 18b14bc1ebbfbe6fcc13d42ad2ccca20 320 Pfam PF13378 Enolase C-terminal domain-like 137 316 4.7E-24 T 18-10-2018 IPR029065 Enolase C-terminal domain-like CH53_4050 18b14bc1ebbfbe6fcc13d42ad2ccca20 320 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 170 201 - T 18-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CH53_4050 18b14bc1ebbfbe6fcc13d42ad2ccca20 320 Gene3D G3DSA:3.30.390.10 1 100 7.3E-28 T 18-10-2018 IPR029017 Enolase-like, N-terminal CH53_4050 18b14bc1ebbfbe6fcc13d42ad2ccca20 320 Gene3D G3DSA:3.20.20.120 113 318 1.5E-57 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CH53_4050 18b14bc1ebbfbe6fcc13d42ad2ccca20 320 SMART SM00922 127 220 3.8E-18 T 18-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CH53_4050 18b14bc1ebbfbe6fcc13d42ad2ccca20 320 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 5 106 5.2E-14 T 18-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CH53_4255 1ea26acb9695a0b850f4fdf309529ca6 296 Gene3D G3DSA:3.40.190.10 112 280 2.7E-7 T 18-10-2018 CH53_4255 1ea26acb9695a0b850f4fdf309529ca6 296 SUPERFAMILY SSF53850 102 284 1.16E-13 T 18-10-2018 CH53_4255 1ea26acb9695a0b850f4fdf309529ca6 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 3.9E-12 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_4255 1ea26acb9695a0b850f4fdf309529ca6 296 Gene3D G3DSA:1.10.10.10 5 88 2.4E-16 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4255 1ea26acb9695a0b850f4fdf309529ca6 296 Gene3D G3DSA:3.40.190.10 169 270 2.7E-7 T 18-10-2018 CH53_4255 1ea26acb9695a0b850f4fdf309529ca6 296 SUPERFAMILY SSF46785 8 86 1.09E-13 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_4255 1ea26acb9695a0b850f4fdf309529ca6 296 Pfam PF03466 LysR substrate binding domain 95 285 3.9E-12 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_978 f82f07aa20ccaefd2ad73cea7d9cd33d 126 SUPERFAMILY SSF50692 1 115 1.13E-46 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CH53_978 f82f07aa20ccaefd2ad73cea7d9cd33d 126 Gene3D G3DSA:2.40.40.20 1 126 3.0E-54 T 18-10-2018 CH53_978 f82f07aa20ccaefd2ad73cea7d9cd33d 126 Pfam PF02261 Aspartate decarboxylase 1 114 8.2E-48 T 18-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CH53_978 f82f07aa20ccaefd2ad73cea7d9cd33d 126 PIRSF PIRSF006246 1 125 6.6E-53 T 18-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CH53_978 f82f07aa20ccaefd2ad73cea7d9cd33d 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 1.1E-60 T 18-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CH53_978 f82f07aa20ccaefd2ad73cea7d9cd33d 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 70.217 T 18-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CH53_978 f82f07aa20ccaefd2ad73cea7d9cd33d 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 2.0E-64 T 18-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CH53_3068 f2211e42ce06580458c708b9502c945b 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 1.4E-100 T 18-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CH53_3068 f2211e42ce06580458c708b9502c945b 344 Gene3D G3DSA:3.40.50.300 1 140 2.6E-46 T 18-10-2018 CH53_3068 f2211e42ce06580458c708b9502c945b 344 Gene3D G3DSA:1.20.272.10 214 343 2.6E-47 T 18-10-2018 CH53_3068 f2211e42ce06580458c708b9502c945b 344 Pfam PF06144 DNA polymerase III, delta subunit 21 190 5.1E-43 T 18-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CH53_3068 f2211e42ce06580458c708b9502c945b 344 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 337 3.5E-61 T 18-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_3068 f2211e42ce06580458c708b9502c945b 344 SUPERFAMILY SSF52540 1 210 5.05E-54 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3068 f2211e42ce06580458c708b9502c945b 344 Gene3D G3DSA:1.10.8.60 143 213 8.0E-26 T 18-10-2018 CH53_3068 f2211e42ce06580458c708b9502c945b 344 SUPERFAMILY SSF48019 212 333 5.36E-36 T 18-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CH53_3136 d3877d0833855dcf87cc216834a75d1b 215 Gene3D G3DSA:3.40.630.20 1 215 3.4E-84 T 18-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 CH53_3136 d3877d0833855dcf87cc216834a75d1b 215 Pfam PF01470 Pyroglutamyl peptidase 3 202 2.2E-83 T 18-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 CH53_3136 d3877d0833855dcf87cc216834a75d1b 215 PIRSF PIRSF015592 1 213 4.9E-90 T 18-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 CH53_3136 d3877d0833855dcf87cc216834a75d1b 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 1.3E-48 T 18-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 CH53_3136 d3877d0833855dcf87cc216834a75d1b 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 1.3E-48 T 18-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 CH53_3136 d3877d0833855dcf87cc216834a75d1b 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 1.3E-48 T 18-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 CH53_3136 d3877d0833855dcf87cc216834a75d1b 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 1.3E-48 T 18-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 CH53_3136 d3877d0833855dcf87cc216834a75d1b 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 162 174 1.3E-48 T 18-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 CH53_3136 d3877d0833855dcf87cc216834a75d1b 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 214 7.1E-91 T 18-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 CH53_3136 d3877d0833855dcf87cc216834a75d1b 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 18-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 CH53_3136 d3877d0833855dcf87cc216834a75d1b 215 SUPERFAMILY SSF53182 2 215 1.09E-76 T 18-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 CH53_3136 d3877d0833855dcf87cc216834a75d1b 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 18-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 CH53_3136 d3877d0833855dcf87cc216834a75d1b 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 201 42.444 T 18-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 CH53_1522 84619c1375c0a4d281dc77b2d440e2e2 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 9.2E-6 T 18-10-2018 CH53_1522 84619c1375c0a4d281dc77b2d440e2e2 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 9.2E-6 T 18-10-2018 CH53_1522 84619c1375c0a4d281dc77b2d440e2e2 191 Pfam PF00117 Glutamine amidotransferase class-I 3 189 3.7E-54 T 18-10-2018 IPR017926 Glutamine amidotransferase CH53_1522 84619c1375c0a4d281dc77b2d440e2e2 191 Gene3D G3DSA:3.40.50.880 1 191 1.0E-60 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_1522 84619c1375c0a4d281dc77b2d440e2e2 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.5E-14 T 18-10-2018 CH53_1522 84619c1375c0a4d281dc77b2d440e2e2 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 7.5E-14 T 18-10-2018 CH53_1522 84619c1375c0a4d281dc77b2d440e2e2 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.5E-14 T 18-10-2018 CH53_1522 84619c1375c0a4d281dc77b2d440e2e2 191 PRINTS PR00097 Anthranilate synthase component II signature 168 181 1.5E-36 T 18-10-2018 CH53_1522 84619c1375c0a4d281dc77b2d440e2e2 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.5E-36 T 18-10-2018 CH53_1522 84619c1375c0a4d281dc77b2d440e2e2 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.5E-36 T 18-10-2018 CH53_1522 84619c1375c0a4d281dc77b2d440e2e2 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.5E-36 T 18-10-2018 CH53_1522 84619c1375c0a4d281dc77b2d440e2e2 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.5E-36 T 18-10-2018 CH53_1522 84619c1375c0a4d281dc77b2d440e2e2 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.5E-36 T 18-10-2018 CH53_1522 84619c1375c0a4d281dc77b2d440e2e2 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 190 2.3E-93 T 18-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CH53_1522 84619c1375c0a4d281dc77b2d440e2e2 191 SUPERFAMILY SSF52317 1 190 1.38E-54 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_3397 18877c8d80e0a961b6ecdf6cb681ac10 454 SUPERFAMILY SSF69864 190 442 1.44E-80 T 18-10-2018 CH53_3397 18877c8d80e0a961b6ecdf6cb681ac10 454 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 18-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CH53_3397 18877c8d80e0a961b6ecdf6cb681ac10 454 Gene3D G3DSA:3.40.50.620 14 191 1.4E-119 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_3397 18877c8d80e0a961b6ecdf6cb681ac10 454 SUPERFAMILY SSF52402 3 186 4.19E-35 T 18-10-2018 CH53_3397 18877c8d80e0a961b6ecdf6cb681ac10 454 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 18-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CH53_3397 18877c8d80e0a961b6ecdf6cb681ac10 454 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 2.7E-166 T 18-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CH53_3397 18877c8d80e0a961b6ecdf6cb681ac10 454 Gene3D G3DSA:1.10.287.400 377 440 2.0E-33 T 18-10-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CH53_3397 18877c8d80e0a961b6ecdf6cb681ac10 454 Pfam PF00764 Arginosuccinate synthase 16 409 6.3E-58 T 18-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CH53_3397 18877c8d80e0a961b6ecdf6cb681ac10 454 Gene3D G3DSA:3.90.1260.10 74 367 1.4E-119 T 18-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CH53_3397 18877c8d80e0a961b6ecdf6cb681ac10 454 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 450 73.831 T 18-10-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CH53_2770 13d542cc0fd03d170762682c8c57c582 279 Gene3D G3DSA:3.40.50.10490 90 274 7.1E-25 T 18-10-2018 CH53_2770 13d542cc0fd03d170762682c8c57c582 279 SUPERFAMILY SSF46689 2 79 2.51E-18 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_2770 13d542cc0fd03d170762682c8c57c582 279 Gene3D G3DSA:1.10.10.10 1 76 9.9E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2770 13d542cc0fd03d170762682c8c57c582 279 SUPERFAMILY SSF53697 95 251 9.79E-11 T 18-10-2018 CH53_2770 13d542cc0fd03d170762682c8c57c582 279 Pfam PF01380 SIS domain 126 247 6.9E-12 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_2770 13d542cc0fd03d170762682c8c57c582 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 71 1.5E-12 T 18-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CH53_275 37d7d7a8e0792e27a9b245a7504b040a 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 1.0E-16 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_275 37d7d7a8e0792e27a9b245a7504b040a 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 1.0E-16 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_275 37d7d7a8e0792e27a9b245a7504b040a 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 1.0E-16 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_275 37d7d7a8e0792e27a9b245a7504b040a 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 1.0E-16 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_275 37d7d7a8e0792e27a9b245a7504b040a 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 1.0E-16 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_275 37d7d7a8e0792e27a9b245a7504b040a 478 Gene3D G3DSA:3.20.20.80 1 477 6.8E-163 T 18-10-2018 CH53_275 37d7d7a8e0792e27a9b245a7504b040a 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 18-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CH53_275 37d7d7a8e0792e27a9b245a7504b040a 478 SUPERFAMILY SSF51445 2 471 1.52E-160 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_275 37d7d7a8e0792e27a9b245a7504b040a 478 Pfam PF00232 Glycosyl hydrolase family 1 4 475 1.8E-128 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_275 37d7d7a8e0792e27a9b245a7504b040a 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 18-10-2018 IPR018120 Glycoside hydrolase family 1, active site CH53_599 d2a958bf631b5325c81caf2ad47804cb 437 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 4 421 53.886 T 18-10-2018 IPR022824 Multidrug resistance protein MdtA CH53_599 d2a958bf631b5325c81caf2ad47804cb 437 Gene3D G3DSA:2.40.420.20 306 399 6.2E-22 T 18-10-2018 CH53_599 d2a958bf631b5325c81caf2ad47804cb 437 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 65 397 1.3E-77 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CH53_599 d2a958bf631b5325c81caf2ad47804cb 437 SUPERFAMILY SSF111369 82 321 1.15E-56 T 18-10-2018 CH53_599 d2a958bf631b5325c81caf2ad47804cb 437 Gene3D G3DSA:2.40.30.170 83 305 8.8E-69 T 18-10-2018 CH53_599 d2a958bf631b5325c81caf2ad47804cb 437 Pfam PF13437 HlyD family secretion protein 201 307 8.7E-7 T 18-10-2018 CH53_599 d2a958bf631b5325c81caf2ad47804cb 437 Gene3D G3DSA:2.40.50.100 89 233 8.8E-69 T 18-10-2018 CH53_599 d2a958bf631b5325c81caf2ad47804cb 437 Gene3D G3DSA:1.10.287.470 124 197 8.8E-69 T 18-10-2018 CH53_599 d2a958bf631b5325c81caf2ad47804cb 437 Pfam PF13533 Biotin-lipoyl like 90 138 8.6E-16 T 18-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CH53_1075 37df4724555bbddc2fdfe2d15d2c2ae9 392 Gene3D G3DSA:1.20.1530.10 2 388 9.5E-156 T 18-10-2018 IPR023171 Na/H antiporter domain superfamily CH53_1075 37df4724555bbddc2fdfe2d15d2c2ae9 392 Pfam PF06965 Na+/H+ antiporter 1 7 380 9.3E-151 T 18-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CH53_1075 37df4724555bbddc2fdfe2d15d2c2ae9 392 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 389 23.732 T 18-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CH53_1075 37df4724555bbddc2fdfe2d15d2c2ae9 392 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 380 3.5E-172 T 18-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CH53_2099 e953ff71a4f8a333dfde8ca80ba94a8a 71 Gene3D G3DSA:3.10.20.30 6 71 9.8E-18 T 18-10-2018 IPR012675 Beta-grasp domain superfamily CH53_2099 e953ff71a4f8a333dfde8ca80ba94a8a 71 SUPERFAMILY SSF54285 6 71 2.33E-15 T 18-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CH53_2099 e953ff71a4f8a333dfde8ca80ba94a8a 71 Pfam PF02597 ThiS family 9 71 4.0E-11 T 18-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 CH53_2099 e953ff71a4f8a333dfde8ca80ba94a8a 71 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 8 71 7.1E-19 T 18-10-2018 IPR010035 ThiS, thiamine-biosynthesis CH53_3685 2fd3f16ebd7ac53cbd8f007edf4fa55d 514 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 492 1.3E-297 T 18-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 CH53_3685 2fd3f16ebd7ac53cbd8f007edf4fa55d 514 Gene3D G3DSA:3.30.70.20 1 304 1.8E-99 T 18-10-2018 CH53_3685 2fd3f16ebd7ac53cbd8f007edf4fa55d 514 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 436 7.7E-30 T 18-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 CH53_3685 2fd3f16ebd7ac53cbd8f007edf4fa55d 514 Pfam PF13247 4Fe-4S dicluster domain 175 271 2.3E-36 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_3685 2fd3f16ebd7ac53cbd8f007edf4fa55d 514 SUPERFAMILY SSF54862 1 505 3.66E-179 T 18-10-2018 CH53_3685 2fd3f16ebd7ac53cbd8f007edf4fa55d 514 Gene3D G3DSA:1.10.3650.10 358 434 6.5E-32 T 18-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 CH53_589 06950473536e9946bd78489b10c2468e 270 SMART SM00382 48 242 1.4E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_589 06950473536e9946bd78489b10c2468e 270 Gene3D G3DSA:3.40.50.300 19 266 1.6E-64 T 18-10-2018 CH53_589 06950473536e9946bd78489b10c2468e 270 SUPERFAMILY SSF52540 21 257 4.24E-60 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_589 06950473536e9946bd78489b10c2468e 270 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 24 270 8.0E-119 T 18-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CH53_589 06950473536e9946bd78489b10c2468e 270 Pfam PF00005 ABC transporter 39 195 5.5E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_589 06950473536e9946bd78489b10c2468e 270 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1356 29eb5d1665e27fd75a9ce7caf0235156 118 Gene3D G3DSA:1.20.1300.10 1 118 1.1E-51 T 18-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_1356 29eb5d1665e27fd75a9ce7caf0235156 118 PIRSF PIRSF000179 1 118 3.1E-50 T 18-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CH53_1356 29eb5d1665e27fd75a9ce7caf0235156 118 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 3 118 4.0E-49 T 18-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CH53_1356 29eb5d1665e27fd75a9ce7caf0235156 118 Pfam PF02313 Fumarate reductase subunit D 5 116 7.9E-51 T 18-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CH53_1356 29eb5d1665e27fd75a9ce7caf0235156 118 SUPERFAMILY SSF81343 1 118 7.19E-52 T 18-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_1356 29eb5d1665e27fd75a9ce7caf0235156 118 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 1 118 26.725 T 18-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CH53_1565 90de887fb195b7bd6bbc18c4ed0e51ff 263 Pfam PF00561 alpha/beta hydrolase fold 16 242 1.5E-24 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_1565 90de887fb195b7bd6bbc18c4ed0e51ff 263 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 6.9E-103 T 18-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 CH53_1565 90de887fb195b7bd6bbc18c4ed0e51ff 263 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 46.796 T 18-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 CH53_1565 90de887fb195b7bd6bbc18c4ed0e51ff 263 Gene3D G3DSA:3.40.50.1820 1 254 5.4E-71 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_1565 90de887fb195b7bd6bbc18c4ed0e51ff 263 SUPERFAMILY SSF53474 3 254 2.16E-49 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_1167 f65313a9dbd02135d5f9a34fcfb75468 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 217 9.1E-17 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_1167 f65313a9dbd02135d5f9a34fcfb75468 224 Gene3D G3DSA:3.40.50.2300 1 121 4.3E-41 T 18-10-2018 CH53_1167 f65313a9dbd02135d5f9a34fcfb75468 224 SMART SM00862 144 217 3.9E-14 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_1167 f65313a9dbd02135d5f9a34fcfb75468 224 SUPERFAMILY SSF46894 119 218 1.53E-17 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_1167 f65313a9dbd02135d5f9a34fcfb75468 224 Gene3D G3DSA:1.10.10.10 122 221 9.4E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1167 f65313a9dbd02135d5f9a34fcfb75468 224 SMART SM00448 1 112 1.1E-41 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1167 f65313a9dbd02135d5f9a34fcfb75468 224 Pfam PF00072 Response regulator receiver domain 4 113 7.2E-29 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1167 f65313a9dbd02135d5f9a34fcfb75468 224 SUPERFAMILY SSF52172 1 129 1.71E-38 T 18-10-2018 IPR011006 CheY-like superfamily CH53_495 6e239571f89549b9344c57fab29a837e 181 Pfam PF13187 4Fe-4S dicluster domain 58 103 3.3E-6 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_495 6e239571f89549b9344c57fab29a837e 181 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 155 166 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_495 6e239571f89549b9344c57fab29a837e 181 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 58 69 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_495 6e239571f89549b9344c57fab29a837e 181 Gene3D G3DSA:3.30.70.20 54 105 6.2E-9 T 18-10-2018 CH53_495 6e239571f89549b9344c57fab29a837e 181 Gene3D G3DSA:3.30.70.20 106 180 5.2E-7 T 18-10-2018 CH53_495 6e239571f89549b9344c57fab29a837e 181 SUPERFAMILY SSF54862 54 172 6.07E-15 T 18-10-2018 CH53_767 3ea031a928d22abbf908427eb1e2e3d9 463 SUPERFAMILY SSF53955 108 260 2.25E-40 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily CH53_767 3ea031a928d22abbf908427eb1e2e3d9 463 Gene3D G3DSA:1.10.530.10 106 258 7.4E-32 T 18-10-2018 CH53_767 3ea031a928d22abbf908427eb1e2e3d9 463 Gene3D G3DSA:3.10.350.10 408 456 2.1E-13 T 18-10-2018 IPR036779 LysM domain superfamily CH53_767 3ea031a928d22abbf908427eb1e2e3d9 463 Gene3D G3DSA:3.10.350.10 349 407 2.2E-14 T 18-10-2018 IPR036779 LysM domain superfamily CH53_767 3ea031a928d22abbf908427eb1e2e3d9 463 SUPERFAMILY SSF54106 355 398 8.11E-10 T 18-10-2018 CH53_767 3ea031a928d22abbf908427eb1e2e3d9 463 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 130 158 - T 18-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CH53_767 3ea031a928d22abbf908427eb1e2e3d9 463 SUPERFAMILY SSF54106 407 454 1.96E-9 T 18-10-2018 CH53_767 3ea031a928d22abbf908427eb1e2e3d9 463 SMART SM00257 355 399 1.0E-11 T 18-10-2018 IPR018392 LysM domain CH53_767 3ea031a928d22abbf908427eb1e2e3d9 463 SMART SM00257 409 454 1.4E-8 T 18-10-2018 IPR018392 LysM domain CH53_767 3ea031a928d22abbf908427eb1e2e3d9 463 Pfam PF01476 LysM domain 410 453 3.0E-9 T 18-10-2018 IPR018392 LysM domain CH53_767 3ea031a928d22abbf908427eb1e2e3d9 463 Pfam PF01476 LysM domain 356 397 3.7E-12 T 18-10-2018 IPR018392 LysM domain CH53_767 3ea031a928d22abbf908427eb1e2e3d9 463 Pfam PF01464 Transglycosylase SLT domain 116 223 2.2E-27 T 18-10-2018 IPR008258 Transglycosylase SLT domain 1 CH53_3167 6e518cb38a8e461cdb163a3304c57790 350 Gene3D G3DSA:3.20.20.70 1 350 9.3E-173 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3167 6e518cb38a8e461cdb163a3304c57790 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 9.4E-179 T 18-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CH53_3167 6e518cb38a8e461cdb163a3304c57790 350 PIRSF PIRSF001361 1 350 1.8E-166 T 18-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CH53_3167 6e518cb38a8e461cdb163a3304c57790 350 SUPERFAMILY SSF51569 7 348 1.26E-140 T 18-10-2018 CH53_3167 6e518cb38a8e461cdb163a3304c57790 350 Pfam PF00793 DAHP synthetase I family 38 338 1.1E-108 T 18-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CH53_1806 c8393d6585c58111314c09ae0952b648 457 SMART SM00729 52 272 3.4E-51 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CH53_1806 c8393d6585c58111314c09ae0952b648 457 Pfam PF04055 Radical SAM superfamily 57 226 1.8E-15 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_1806 c8393d6585c58111314c09ae0952b648 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 457 7.6E-222 T 18-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 CH53_1806 c8393d6585c58111314c09ae0952b648 457 Pfam PF06969 HemN C-terminal domain 364 431 4.1E-12 T 18-10-2018 IPR010723 HemN, C-terminal CH53_1806 c8393d6585c58111314c09ae0952b648 457 SUPERFAMILY SSF102114 6 444 7.85E-146 T 18-10-2018 CH53_1806 c8393d6585c58111314c09ae0952b648 457 Gene3D G3DSA:3.80.30.20 1 363 8.0E-138 T 18-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CH53_1806 c8393d6585c58111314c09ae0952b648 457 PIRSF PIRSF000167 3 454 6.2E-174 T 18-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 CH53_1806 c8393d6585c58111314c09ae0952b648 457 Gene3D G3DSA:1.10.10.920 364 457 9.1E-37 T 18-10-2018 CH53_3204 452ce4469a40c7e29c321f4cd66e6544 310 Pfam PF01207 Dihydrouridine synthase (Dus) 5 297 2.9E-89 T 18-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CH53_3204 452ce4469a40c7e29c321f4cd66e6544 310 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 51.581 T 18-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 CH53_3204 452ce4469a40c7e29c321f4cd66e6544 310 SUPERFAMILY SSF51395 1 301 2.56E-71 T 18-10-2018 CH53_3204 452ce4469a40c7e29c321f4cd66e6544 310 Gene3D G3DSA:1.20.225.30 243 309 1.9E-31 T 18-10-2018 CH53_3204 452ce4469a40c7e29c321f4cd66e6544 310 PIRSF PIRSF006621 1 310 3.9E-81 T 18-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CH53_3204 452ce4469a40c7e29c321f4cd66e6544 310 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 18-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CH53_3204 452ce4469a40c7e29c321f4cd66e6544 310 Gene3D G3DSA:3.20.20.70 1 242 1.2E-86 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_884 6a8a8e08caaef06caa6cb777fa659cd6 244 SUPERFAMILY SSF51735 4 244 1.45E-70 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_884 6a8a8e08caaef06caa6cb777fa659cd6 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 1.3E-53 T 18-10-2018 CH53_884 6a8a8e08caaef06caa6cb777fa659cd6 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 187 6.2E-6 T 18-10-2018 CH53_884 6a8a8e08caaef06caa6cb777fa659cd6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.3E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_884 6a8a8e08caaef06caa6cb777fa659cd6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.3E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_884 6a8a8e08caaef06caa6cb777fa659cd6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.3E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_884 6a8a8e08caaef06caa6cb777fa659cd6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.3E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_884 6a8a8e08caaef06caa6cb777fa659cd6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.3E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_884 6a8a8e08caaef06caa6cb777fa659cd6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.3E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_884 6a8a8e08caaef06caa6cb777fa659cd6 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 8.1E-7 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_884 6a8a8e08caaef06caa6cb777fa659cd6 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.1E-7 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_884 6a8a8e08caaef06caa6cb777fa659cd6 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 8.1E-7 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_884 6a8a8e08caaef06caa6cb777fa659cd6 244 Gene3D G3DSA:3.40.50.720 1 243 1.9E-70 T 18-10-2018 CH53_884 6a8a8e08caaef06caa6cb777fa659cd6 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CH53_1340 94f8b337e2230d3ac82ed398e2f171aa 638 Gene3D G3DSA:3.30.1370.100 502 590 4.9E-66 T 18-10-2018 CH53_1340 94f8b337e2230d3ac82ed398e2f171aa 638 SUPERFAMILY SSF55874 1 204 1.83E-55 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1340 94f8b337e2230d3ac82ed398e2f171aa 638 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 1.1E-11 T 18-10-2018 CH53_1340 94f8b337e2230d3ac82ed398e2f171aa 638 SUPERFAMILY SSF118116 456 634 1.44E-42 T 18-10-2018 IPR037198 MutL, C-terminal domain superfamily CH53_1340 94f8b337e2230d3ac82ed398e2f171aa 638 Gene3D G3DSA:2.30.42.20 458 633 4.9E-66 T 18-10-2018 CH53_1340 94f8b337e2230d3ac82ed398e2f171aa 638 Gene3D G3DSA:3.30.565.10 1 216 5.7E-71 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1340 94f8b337e2230d3ac82ed398e2f171aa 638 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 635 26.098 T 18-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 CH53_1340 94f8b337e2230d3ac82ed398e2f171aa 638 SMART SM01340 212 330 5.1E-59 T 18-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 CH53_1340 94f8b337e2230d3ac82ed398e2f171aa 638 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 3.9E-103 T 18-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 CH53_1340 94f8b337e2230d3ac82ed398e2f171aa 638 SMART SM00853 461 596 2.7E-12 T 18-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CH53_1340 94f8b337e2230d3ac82ed398e2f171aa 638 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 18-10-2018 IPR014762 DNA mismatch repair, conserved site CH53_1340 94f8b337e2230d3ac82ed398e2f171aa 638 Pfam PF08676 MutL C terminal dimerisation domain 458 587 5.0E-26 T 18-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CH53_1340 94f8b337e2230d3ac82ed398e2f171aa 638 Gene3D G3DSA:3.30.230.10 217 329 2.4E-42 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH53_1340 94f8b337e2230d3ac82ed398e2f171aa 638 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 3.5E-39 T 18-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 CH53_1340 94f8b337e2230d3ac82ed398e2f171aa 638 SUPERFAMILY SSF54211 191 330 1.93E-38 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_538 6965c47fb53b76d4ed6103df7a2c5957 558 Pfam PF02563 Polysaccharide biosynthesis/export protein 88 159 9.4E-11 T 18-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 CH53_538 6965c47fb53b76d4ed6103df7a2c5957 558 Gene3D G3DSA:3.10.560.10 456 528 6.4E-6 T 18-10-2018 CH53_538 6965c47fb53b76d4ed6103df7a2c5957 558 Gene3D G3DSA:3.10.560.10 158 247 7.7E-9 T 18-10-2018 CH53_538 6965c47fb53b76d4ed6103df7a2c5957 558 Pfam PF10531 SLBB domain 461 507 0.003 T 18-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_494 3bd2cf3311fe9dae5c3a7f24ed8c78b6 204 SUPERFAMILY SSF89155 6 203 2.75E-46 T 18-10-2018 IPR036411 TorD-like superfamily CH53_494 3bd2cf3311fe9dae5c3a7f24ed8c78b6 204 PIRSF PIRSF004690 4 203 1.8E-35 T 18-10-2018 IPR026269 Tat proofreading chaperone DmsD-type CH53_494 3bd2cf3311fe9dae5c3a7f24ed8c78b6 204 Pfam PF02613 Nitrate reductase delta subunit 54 160 8.9E-21 T 18-10-2018 IPR020945 DMSO/Nitrate reductase chaperone CH53_494 3bd2cf3311fe9dae5c3a7f24ed8c78b6 204 Gene3D G3DSA:1.10.3480.10 5 204 5.3E-40 T 18-10-2018 CH53_2105 80543a39af06a950754531d68e96766f 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 18-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CH53_2105 80543a39af06a950754531d68e96766f 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 18-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CH53_2105 80543a39af06a950754531d68e96766f 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.502 T 18-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CH53_2105 80543a39af06a950754531d68e96766f 355 SUPERFAMILY SSF51726 2 353 4.36E-122 T 18-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CH53_2105 80543a39af06a950754531d68e96766f 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 4.8E-142 T 18-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CH53_2105 80543a39af06a950754531d68e96766f 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 346 2.0E-135 T 18-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CH53_2105 80543a39af06a950754531d68e96766f 355 Gene3D G3DSA:3.20.20.210 1 354 9.4E-163 T 18-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CH53_1782 1051d3cfffbb036a72df51bf6db7aa5f 488 SMART SM00327 324 488 9.8E-7 T 18-10-2018 IPR002035 von Willebrand factor, type A CH53_1782 1051d3cfffbb036a72df51bf6db7aa5f 488 SUPERFAMILY SSF53300 325 464 4.82E-18 T 18-10-2018 IPR036465 von Willebrand factor A-like domain superfamily CH53_1782 1051d3cfffbb036a72df51bf6db7aa5f 488 Gene3D G3DSA:3.40.50.410 326 469 1.3E-5 T 18-10-2018 IPR036465 von Willebrand factor A-like domain superfamily CH53_1782 1051d3cfffbb036a72df51bf6db7aa5f 488 Pfam PF05762 VWA domain containing CoxE-like protein 309 441 1.3E-8 T 18-10-2018 IPR008912 Uncharacterised protein family CoxE-like CH53_1782 1051d3cfffbb036a72df51bf6db7aa5f 488 Hamap MF_01626 Protein ViaA [viaA]. 1 488 59.22 T 18-10-2018 IPR023481 Uncharacterised protein family ViaA CH53_2679 2f1cef2a7752dc3c6c8ea513bd474e92 404 Pfam PF07690 Major Facilitator Superfamily 19 345 4.4E-17 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_2679 2f1cef2a7752dc3c6c8ea513bd474e92 404 Gene3D G3DSA:1.20.1250.20 11 393 2.1E-24 T 18-10-2018 CH53_2679 2f1cef2a7752dc3c6c8ea513bd474e92 404 SUPERFAMILY SSF103473 14 400 1.05E-26 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_2679 2f1cef2a7752dc3c6c8ea513bd474e92 404 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 43.071 T 18-10-2018 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 CH53_2129 311467ed814092020617bd3bd1915fda 593 Gene3D G3DSA:3.30.565.10 438 589 4.9E-45 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_2129 311467ed814092020617bd3bd1915fda 593 Gene3D G3DSA:3.30.450.20 234 360 1.1E-22 T 18-10-2018 CH53_2129 311467ed814092020617bd3bd1915fda 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 585 3.0E-24 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_2129 311467ed814092020617bd3bd1915fda 593 SUPERFAMILY SSF55874 428 585 7.86E-42 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_2129 311467ed814092020617bd3bd1915fda 593 SMART SM00388 373 438 5.9E-20 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_2129 311467ed814092020617bd3bd1915fda 593 Gene3D G3DSA:1.10.287.130 361 437 1.0E-22 T 18-10-2018 CH53_2129 311467ed814092020617bd3bd1915fda 593 SUPERFAMILY SSF47384 362 438 1.59E-17 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_2129 311467ed814092020617bd3bd1915fda 593 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 434 2.3E-17 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_2129 311467ed814092020617bd3bd1915fda 593 SMART SM00091 247 314 4.1E-13 T 18-10-2018 IPR000014 PAS domain CH53_2129 311467ed814092020617bd3bd1915fda 593 SMART SM00387 480 587 3.1E-36 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_2129 311467ed814092020617bd3bd1915fda 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 584 3.5E-18 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2129 311467ed814092020617bd3bd1915fda 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 546 3.5E-18 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2129 311467ed814092020617bd3bd1915fda 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 532 3.5E-18 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2129 311467ed814092020617bd3bd1915fda 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 565 3.5E-18 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_2129 311467ed814092020617bd3bd1915fda 593 Pfam PF00989 PAS fold 250 354 5.5E-16 T 18-10-2018 IPR013767 PAS fold GO:0006355 CH53_2129 311467ed814092020617bd3bd1915fda 593 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 245 364 3.0E-16 T 18-10-2018 IPR000014 PAS domain CH53_2129 311467ed814092020617bd3bd1915fda 593 SUPERFAMILY SSF55785 239 352 2.27E-16 T 18-10-2018 IPR035965 PAS domain superfamily CH53_3865 f24ed330db47c253bb4edefe214566f7 154 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 130 27.945 T 18-10-2018 IPR023006 Uncharacterised protein family UPF0225 CH53_3865 f24ed330db47c253bb4edefe214566f7 154 SUPERFAMILY SSF103642 134 153 1.8E-7 T 18-10-2018 CH53_3865 f24ed330db47c253bb4edefe214566f7 154 SUPERFAMILY SSF54427 25 130 1.28E-35 T 18-10-2018 IPR032710 NTF2-like domain superfamily CH53_3865 f24ed330db47c253bb4edefe214566f7 154 Gene3D G3DSA:3.10.450.50 2 154 1.5E-52 T 18-10-2018 CH53_3865 f24ed330db47c253bb4edefe214566f7 154 Pfam PF02810 SEC-C motif 136 153 6.2E-10 T 18-10-2018 IPR004027 SEC-C motif CH53_3865 f24ed330db47c253bb4edefe214566f7 154 Pfam PF02810 SEC-C motif 3 19 4.7E-5 T 18-10-2018 IPR004027 SEC-C motif CH53_2925 ce0211b6e75936e6e698ccd731768d5e 284 Gene3D G3DSA:1.25.40.10 197 284 3.5E-26 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_2925 ce0211b6e75936e6e698ccd731768d5e 284 Pfam PF14559 Tetratricopeptide repeat 124 190 1.2E-21 T 18-10-2018 CH53_2925 ce0211b6e75936e6e698ccd731768d5e 284 Gene3D G3DSA:1.25.40.10 112 196 6.4E-27 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_2925 ce0211b6e75936e6e698ccd731768d5e 284 SUPERFAMILY SSF52833 5 113 1.29E-29 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_2925 ce0211b6e75936e6e698ccd731768d5e 284 Pfam PF00085 Thioredoxin 8 107 1.2E-17 T 18-10-2018 IPR013766 Thioredoxin domain GO:0045454 CH53_2925 ce0211b6e75936e6e698ccd731768d5e 284 SUPERFAMILY SSF48452 117 246 6.27E-9 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_2925 ce0211b6e75936e6e698ccd731768d5e 284 Pfam PF14561 Tetratricopeptide repeat 195 284 9.2E-31 T 18-10-2018 CH53_2925 ce0211b6e75936e6e698ccd731768d5e 284 Gene3D G3DSA:3.40.30.10 3 111 6.4E-27 T 18-10-2018 CH53_3821 b57e73dea97e6a7c2f3b8b21224ce6df 89 Gene3D G3DSA:3.30.1070.10 31 87 5.9E-28 T 18-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 CH53_3821 b57e73dea97e6a7c2f3b8b21224ce6df 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 2.9E-24 T 18-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CH53_3821 b57e73dea97e6a7c2f3b8b21224ce6df 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 3.0E-33 T 18-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CH53_3821 b57e73dea97e6a7c2f3b8b21224ce6df 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 18.604 T 18-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CH53_3821 b57e73dea97e6a7c2f3b8b21224ce6df 89 SUPERFAMILY SSF55229 32 85 1.44E-17 T 18-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 CH53_1811 c16732e65f25463a1de006e15e3f1b67 195 Gene3D G3DSA:1.10.150.240 16 81 7.1E-62 T 18-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CH53_1811 c16732e65f25463a1de006e15e3f1b67 195 SUPERFAMILY SSF56784 3 189 1.8E-40 T 18-10-2018 IPR036412 HAD-like superfamily CH53_1811 c16732e65f25463a1de006e15e3f1b67 195 Gene3D G3DSA:3.40.50.1000 4 182 7.1E-62 T 18-10-2018 IPR023214 HAD superfamily CH53_1811 c16732e65f25463a1de006e15e3f1b67 195 Pfam PF13419 Haloacid dehalogenase-like hydrolase 60 184 2.7E-9 T 18-10-2018 CH53_1811 c16732e65f25463a1de006e15e3f1b67 195 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 1.7E-6 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1811 c16732e65f25463a1de006e15e3f1b67 195 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 1.7E-6 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1811 c16732e65f25463a1de006e15e3f1b67 195 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 1.7E-6 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1811 c16732e65f25463a1de006e15e3f1b67 195 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 1.7E-6 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1811 c16732e65f25463a1de006e15e3f1b67 195 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 55 184 1.4E-16 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_801 6eb38caf3eda25f482364b605983fa4c 359 Pfam PF00793 DAHP synthetase I family 41 340 5.0E-106 T 18-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CH53_801 6eb38caf3eda25f482364b605983fa4c 359 SUPERFAMILY SSF51569 9 347 3.57E-136 T 18-10-2018 CH53_801 6eb38caf3eda25f482364b605983fa4c 359 PIRSF PIRSF001361 1 354 4.1E-163 T 18-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CH53_801 6eb38caf3eda25f482364b605983fa4c 359 Gene3D G3DSA:3.20.20.70 3 350 1.7E-155 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_801 6eb38caf3eda25f482364b605983fa4c 359 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 348 2.4E-167 T 18-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CH53_3794 79f7b6cf2c2efc25dcd85d78ff8169e1 271 Pfam PF01904 Protein of unknown function DUF72 20 248 1.3E-50 T 18-10-2018 IPR002763 Protein of unknown function DUF72 CH53_3794 79f7b6cf2c2efc25dcd85d78ff8169e1 271 SUPERFAMILY SSF117396 2 251 2.49E-64 T 18-10-2018 IPR036520 UPF0759 superfamily CH53_3794 79f7b6cf2c2efc25dcd85d78ff8169e1 271 Gene3D G3DSA:3.20.20.410 1 255 7.1E-41 T 18-10-2018 IPR036520 UPF0759 superfamily CH53_809 c8d48aefdd9eacdf61b3ee6d7315e984 453 SUPERFAMILY SSF47446 298 431 8.5E-46 T 18-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CH53_809 c8d48aefdd9eacdf61b3ee6d7315e984 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.872 T 18-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 CH53_809 c8d48aefdd9eacdf61b3ee6d7315e984 453 SUPERFAMILY SSF52540 42 354 7.08E-57 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_809 c8d48aefdd9eacdf61b3ee6d7315e984 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 18-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CH53_809 c8d48aefdd9eacdf61b3ee6d7315e984 453 Gene3D G3DSA:3.40.50.300 90 285 5.9E-124 T 18-10-2018 CH53_809 c8d48aefdd9eacdf61b3ee6d7315e984 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 3.4E-75 T 18-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CH53_809 c8d48aefdd9eacdf61b3ee6d7315e984 453 SMART SM00382 99 247 5.1E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_809 c8d48aefdd9eacdf61b3ee6d7315e984 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 2.4E-179 T 18-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CH53_809 c8d48aefdd9eacdf61b3ee6d7315e984 453 SMART SM00962 100 296 1.2E-116 T 18-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CH53_809 c8d48aefdd9eacdf61b3ee6d7315e984 453 Gene3D G3DSA:1.10.260.30 328 450 1.3E-45 T 18-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CH53_809 c8d48aefdd9eacdf61b3ee6d7315e984 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.7E-23 T 18-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CH53_809 c8d48aefdd9eacdf61b3ee6d7315e984 453 Pfam PF02978 Signal peptide binding domain 329 427 1.2E-32 T 18-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CH53_809 c8d48aefdd9eacdf61b3ee6d7315e984 453 Gene3D G3DSA:1.20.120.140 4 305 5.9E-124 T 18-10-2018 CH53_809 c8d48aefdd9eacdf61b3ee6d7315e984 453 SMART SM00963 1 86 1.5E-37 T 18-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CH53_3761 f435c814c67bd0c42f9416de16c66552 298 Gene3D G3DSA:3.30.230.10 6 169 3.0E-56 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH53_3761 f435c814c67bd0c42f9416de16c66552 298 PIRSF PIRSF010376 5 289 7.5E-86 T 18-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CH53_3761 f435c814c67bd0c42f9416de16c66552 298 Pfam PF00288 GHMP kinases N terminal domain 97 154 1.8E-11 T 18-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CH53_3761 f435c814c67bd0c42f9416de16c66552 298 Pfam PF08544 GHMP kinases C terminal 215 265 2.1E-5 T 18-10-2018 IPR013750 GHMP kinase, C-terminal domain CH53_3761 f435c814c67bd0c42f9416de16c66552 298 Gene3D G3DSA:3.30.70.890 171 289 4.1E-27 T 18-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CH53_3761 f435c814c67bd0c42f9416de16c66552 298 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 7 281 32.462 T 18-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CH53_3761 f435c814c67bd0c42f9416de16c66552 298 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 6 286 7.3E-110 T 18-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CH53_3761 f435c814c67bd0c42f9416de16c66552 298 SUPERFAMILY SSF54211 7 168 1.14E-46 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_3761 f435c814c67bd0c42f9416de16c66552 298 SUPERFAMILY SSF55060 173 287 4.82E-36 T 18-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CH53_2649 300aee834ded5efae8d4af6da339afc9 316 Pfam PF00226 DnaJ domain 5 66 4.1E-24 T 18-10-2018 IPR001623 DnaJ domain CH53_2649 300aee834ded5efae8d4af6da339afc9 316 Gene3D G3DSA:1.20.5.460 289 316 2.3E-10 T 18-10-2018 CH53_2649 300aee834ded5efae8d4af6da339afc9 316 Gene3D G3DSA:1.10.287.110 2 123 9.7E-32 T 18-10-2018 IPR036869 Chaperone J-domain superfamily CH53_2649 300aee834ded5efae8d4af6da339afc9 316 Gene3D G3DSA:2.60.260.20 213 288 4.2E-29 T 18-10-2018 CH53_2649 300aee834ded5efae8d4af6da339afc9 316 Pfam PF01556 DnaJ C terminal domain 133 289 9.7E-33 T 18-10-2018 IPR002939 Chaperone DnaJ, C-terminal CH53_2649 300aee834ded5efae8d4af6da339afc9 316 SMART SM00271 4 61 1.0E-26 T 18-10-2018 IPR001623 DnaJ domain CH53_2649 300aee834ded5efae8d4af6da339afc9 316 SUPERFAMILY SSF46565 1 110 9.16E-28 T 18-10-2018 IPR036869 Chaperone J-domain superfamily CH53_2649 300aee834ded5efae8d4af6da339afc9 316 SUPERFAMILY SSF49493 128 224 1.7E-16 T 18-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CH53_2649 300aee834ded5efae8d4af6da339afc9 316 PRINTS PR00625 DnaJ domain signature 25 40 1.9E-19 T 18-10-2018 IPR001623 DnaJ domain CH53_2649 300aee834ded5efae8d4af6da339afc9 316 PRINTS PR00625 DnaJ domain signature 7 25 1.9E-19 T 18-10-2018 IPR001623 DnaJ domain CH53_2649 300aee834ded5efae8d4af6da339afc9 316 PRINTS PR00625 DnaJ domain signature 41 61 1.9E-19 T 18-10-2018 IPR001623 DnaJ domain CH53_2649 300aee834ded5efae8d4af6da339afc9 316 SUPERFAMILY SSF49493 217 298 1.57E-17 T 18-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CH53_2649 300aee834ded5efae8d4af6da339afc9 316 Gene3D G3DSA:2.60.260.20 128 212 1.0E-19 T 18-10-2018 CH53_2649 300aee834ded5efae8d4af6da339afc9 316 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 18-10-2018 IPR018253 DnaJ domain, conserved site CH53_1001 072ecb2c5496132d41e707d065ac9c31 144 Gene3D G3DSA:3.30.700.10 7 141 1.4E-24 T 18-10-2018 CH53_1001 072ecb2c5496132d41e707d065ac9c31 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 1.9E-9 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site CH53_1001 072ecb2c5496132d41e707d065ac9c31 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 7.1E-11 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site CH53_1001 072ecb2c5496132d41e707d065ac9c31 144 Pfam PF00114 Pilin (bacterial filament) 36 131 2.3E-5 T 18-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 CH53_1001 072ecb2c5496132d41e707d065ac9c31 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site CH53_1001 072ecb2c5496132d41e707d065ac9c31 144 SUPERFAMILY SSF54523 28 138 1.52E-24 T 18-10-2018 CH53_113 e44e968829f8e8ef8c10c5fb44216d44 211 PIRSF PIRSF028788 1 208 5.6E-61 T 18-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type CH53_113 e44e968829f8e8ef8c10c5fb44216d44 211 Pfam PF04994 TfoX C-terminal domain 119 196 7.6E-24 T 18-10-2018 IPR007077 TfoX, C-terminal CH53_113 e44e968829f8e8ef8c10c5fb44216d44 211 Gene3D G3DSA:1.10.150.20 117 204 2.2E-20 T 18-10-2018 CH53_113 e44e968829f8e8ef8c10c5fb44216d44 211 Pfam PF04993 TfoX N-terminal domain 17 105 3.9E-26 T 18-10-2018 IPR007076 TfoX, N-terminal CH53_113 e44e968829f8e8ef8c10c5fb44216d44 211 SUPERFAMILY SSF159894 13 106 3.66E-29 T 18-10-2018 CH53_113 e44e968829f8e8ef8c10c5fb44216d44 211 Gene3D G3DSA:3.30.1460.30 5 108 1.6E-28 T 18-10-2018 CH53_3596 1a00f330485e8c6075588a0256b0a888 251 SUPERFAMILY SSF52540 4 243 1.52E-78 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3596 1a00f330485e8c6075588a0256b0a888 251 PIRSF PIRSF039085 1 249 8.3E-110 T 18-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CH53_3596 1a00f330485e8c6075588a0256b0a888 251 SMART SM00382 28 221 1.7E-19 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3596 1a00f330485e8c6075588a0256b0a888 251 Gene3D G3DSA:3.40.50.300 1 250 3.0E-82 T 18-10-2018 CH53_3596 1a00f330485e8c6075588a0256b0a888 251 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3596 1a00f330485e8c6075588a0256b0a888 251 Pfam PF00005 ABC transporter 19 173 9.0E-35 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2162 b7e4db8d23f9213b59c18a96090fb7b8 182 Pfam PF00436 Single-strand binding protein family 6 112 2.8E-42 T 18-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CH53_2162 b7e4db8d23f9213b59c18a96090fb7b8 182 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 182 2.4E-60 T 18-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CH53_2162 b7e4db8d23f9213b59c18a96090fb7b8 182 Gene3D G3DSA:2.40.50.140 2 147 6.1E-53 T 18-10-2018 CH53_2162 b7e4db8d23f9213b59c18a96090fb7b8 182 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 39.4 T 18-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CH53_2162 b7e4db8d23f9213b59c18a96090fb7b8 182 PIRSF PIRSF002070 2 162 1.2E-41 T 18-10-2018 CH53_2162 b7e4db8d23f9213b59c18a96090fb7b8 182 SUPERFAMILY SSF50249 4 182 2.16E-61 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_3153 aed3b0e70fe9b10f92178caf17c34b97 142 Gene3D G3DSA:3.30.420.270 60 133 1.3E-25 T 18-10-2018 CH53_3153 aed3b0e70fe9b10f92178caf17c34b97 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 4.7E-39 T 18-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 CH53_3153 aed3b0e70fe9b10f92178caf17c34b97 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 5.4E-25 T 18-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CH53_3153 aed3b0e70fe9b10f92178caf17c34b97 142 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 6 140 28.222 T 18-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 CH53_2626 fd043c76731ae11293a627c3d3542c71 216 Pfam PF03006 Haemolysin-III related 12 209 5.9E-38 T 18-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 CH53_2626 fd043c76731ae11293a627c3d3542c71 216 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 216 1.8E-71 T 18-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 CH53_1784 dc2e58fbf6111e17f68c0f20ff7417fa 502 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 1.4E-24 T 18-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CH53_1784 dc2e58fbf6111e17f68c0f20ff7417fa 502 Gene3D G3DSA:2.40.128.430 331 437 1.0E-99 T 18-10-2018 CH53_1784 dc2e58fbf6111e17f68c0f20ff7417fa 502 SMART SM00382 38 187 3.1E-6 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1784 dc2e58fbf6111e17f68c0f20ff7417fa 502 Gene3D G3DSA:3.40.50.300 1 221 3.7E-62 T 18-10-2018 CH53_1784 dc2e58fbf6111e17f68c0f20ff7417fa 502 Gene3D G3DSA:1.20.58.1510 287 494 1.0E-99 T 18-10-2018 CH53_1784 dc2e58fbf6111e17f68c0f20ff7417fa 502 SUPERFAMILY SSF52540 21 289 2.37E-19 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1784 dc2e58fbf6111e17f68c0f20ff7417fa 502 Hamap MF_01625 ATPase RavA [ravA]. 1 498 58.197 T 18-10-2018 IPR023671 ATPase RavA GO:0005737|GO:0016887 CH53_1784 dc2e58fbf6111e17f68c0f20ff7417fa 502 Gene3D G3DSA:1.10.8.300 222 285 7.6E-28 T 18-10-2018 CH53_1784 dc2e58fbf6111e17f68c0f20ff7417fa 502 Pfam PF12592 Protein of unknown function (DUF3763) 444 497 1.7E-20 T 18-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 CH53_3162 4e3470f294bfa7899d7fc5f18a71c401 353 Gene3D G3DSA:3.40.50.10800 115 340 8.2E-95 T 18-10-2018 CH53_3162 4e3470f294bfa7899d7fc5f18a71c401 353 Pfam PF02445 Quinolinate synthetase A protein 31 340 1.3E-103 T 18-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CH53_3162 4e3470f294bfa7899d7fc5f18a71c401 353 SUPERFAMILY SSF142754 29 341 1.7E-106 T 18-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CH53_3162 4e3470f294bfa7899d7fc5f18a71c401 353 Gene3D G3DSA:3.40.50.10800 200 295 8.2E-95 T 18-10-2018 CH53_3162 4e3470f294bfa7899d7fc5f18a71c401 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 71.112 T 18-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CH53_3162 4e3470f294bfa7899d7fc5f18a71c401 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 7.3E-121 T 18-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CH53_3162 4e3470f294bfa7899d7fc5f18a71c401 353 Gene3D G3DSA:3.40.50.10800 31 322 8.2E-95 T 18-10-2018 CH53_1376 82172fd5481713a8d2bc7cce655a63c2 385 Gene3D G3DSA:1.10.10.2840 256 385 1.0E-25 T 18-10-2018 CH53_1376 82172fd5481713a8d2bc7cce655a63c2 385 Pfam PF13556 PucR C-terminal helix-turn-helix domain 323 380 7.5E-24 T 18-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain CH53_1376 82172fd5481713a8d2bc7cce655a63c2 385 Pfam PF05651 Putative sugar diacid recognition 6 138 2.9E-47 T 18-10-2018 IPR008599 Putative sugar diacid recognition CH53_1582 56843a32e763abb44943f7a4718c71dc 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.4E-22 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1582 56843a32e763abb44943f7a4718c71dc 296 SUPERFAMILY SSF53850 88 294 1.16E-31 T 18-10-2018 CH53_1582 56843a32e763abb44943f7a4718c71dc 296 Gene3D G3DSA:3.40.190.10 91 287 1.9E-55 T 18-10-2018 CH53_1582 56843a32e763abb44943f7a4718c71dc 296 Pfam PF03466 LysR substrate binding domain 87 292 5.7E-37 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_1582 56843a32e763abb44943f7a4718c71dc 296 Gene3D G3DSA:1.10.10.10 1 90 5.8E-30 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1582 56843a32e763abb44943f7a4718c71dc 296 SUPERFAMILY SSF46785 1 85 3.92E-23 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1582 56843a32e763abb44943f7a4718c71dc 296 Gene3D G3DSA:3.40.190.10 164 269 1.9E-55 T 18-10-2018 CH53_1582 56843a32e763abb44943f7a4718c71dc 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.2E-10 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1582 56843a32e763abb44943f7a4718c71dc 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.2E-10 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1582 56843a32e763abb44943f7a4718c71dc 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.2E-10 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3844 72d37dd7f6779c20415483a41784df5d 644 Pfam PF08298 PrkA AAA domain 20 380 5.6E-175 T 18-10-2018 IPR013153 PrkA AAA domain CH53_3844 72d37dd7f6779c20415483a41784df5d 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 8.4E-73 T 18-10-2018 IPR010650 PrkA C-terminal domain CH53_3844 72d37dd7f6779c20415483a41784df5d 644 PIRSF PIRSF000549 1 644 8.9E-286 T 18-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 CH53_3844 72d37dd7f6779c20415483a41784df5d 644 SUPERFAMILY SSF52540 75 368 8.45E-16 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3844 72d37dd7f6779c20415483a41784df5d 644 SMART SM00763 19 380 2.6E-215 T 18-10-2018 IPR013153 PrkA AAA domain CH53_2366 a0bdc0f311b66d9f9d580a6cce04430e 756 SMART SM00729 372 622 2.7E-6 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CH53_2366 a0bdc0f311b66d9f9d580a6cce04430e 756 Pfam PF08497 Radical SAM N-terminal 28 375 5.0E-146 T 18-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal CH53_2366 a0bdc0f311b66d9f9d580a6cce04430e 756 SUPERFAMILY SSF102114 356 616 1.83E-10 T 18-10-2018 CH53_2366 a0bdc0f311b66d9f9d580a6cce04430e 756 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 376 396 - T 18-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CH53_2366 a0bdc0f311b66d9f9d580a6cce04430e 756 Pfam PF04055 Radical SAM superfamily 376 581 1.4E-19 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_2366 a0bdc0f311b66d9f9d580a6cce04430e 756 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 28 642 50.645 T 18-10-2018 IPR022946 Uncharacterised protein family UPF0313 CH53_2366 a0bdc0f311b66d9f9d580a6cce04430e 756 Gene3D G3DSA:3.80.30.20 371 624 1.9E-13 T 18-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CH53_2366 a0bdc0f311b66d9f9d580a6cce04430e 756 Pfam PF11842 Domain of unknown function (DUF3362) 590 714 1.1E-43 T 18-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal CH53_2366 a0bdc0f311b66d9f9d580a6cce04430e 756 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 28 640 1.5E-266 T 18-10-2018 IPR022946 Uncharacterised protein family UPF0313 CH53_1243 41756b52680983b21c70acdf4639c82a 152 Gene3D G3DSA:2.60.120.370 1 152 1.4E-39 T 18-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily CH53_1243 41756b52680983b21c70acdf4639c82a 152 SUPERFAMILY SSF51197 1 151 7.14E-44 T 18-10-2018 CH53_1243 41756b52680983b21c70acdf4639c82a 152 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 5.2E-52 T 18-10-2018 IPR004375 YhcH/YjgK/YiaL family CH53_1243 41756b52680983b21c70acdf4639c82a 152 Pfam PF04074 Domain of unknown function (DUF386) 1 149 4.4E-43 T 18-10-2018 IPR004375 YhcH/YjgK/YiaL family CH53_3209 e52a5cb13e7240fc719465e53f20ff83 179 SMART SM01118 8 179 9.3E-11 T 18-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CH53_3209 e52a5cb13e7240fc719465e53f20ff83 179 Gene3D G3DSA:2.40.320.10 1 179 3.4E-44 T 18-10-2018 CH53_3209 e52a5cb13e7240fc719465e53f20ff83 179 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 10 150 2.0E-6 T 18-10-2018 CH53_3209 e52a5cb13e7240fc719465e53f20ff83 179 Pfam PF01928 CYTH domain 9 173 3.4E-20 T 18-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CH53_3209 e52a5cb13e7240fc719465e53f20ff83 179 SUPERFAMILY SSF55154 9 177 9.81E-35 T 18-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 CH53_1180 6f1260776024650cc32744516902fa32 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 203 6.5E-8 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1180 6f1260776024650cc32744516902fa32 229 Gene3D G3DSA:1.10.10.10 130 212 4.8E-10 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1180 6f1260776024650cc32744516902fa32 229 SMART SM00421 151 208 2.4E-4 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1180 6f1260776024650cc32744516902fa32 229 SUPERFAMILY SSF46894 145 205 1.5E-12 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_1374 49ca3a3577ce1524da81e325fc2a264e 443 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 24 432 6.0E-138 T 18-10-2018 CH53_1374 49ca3a3577ce1524da81e325fc2a264e 443 PIRSF PIRSF002808 3 443 3.9E-38 T 18-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 CH53_1374 49ca3a3577ce1524da81e325fc2a264e 443 Pfam PF07690 Major Facilitator Superfamily 22 364 2.0E-46 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_1374 49ca3a3577ce1524da81e325fc2a264e 443 SUPERFAMILY SSF103473 9 439 1.83E-76 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_1374 49ca3a3577ce1524da81e325fc2a264e 443 Gene3D G3DSA:1.20.1250.20 7 209 3.0E-44 T 18-10-2018 CH53_1374 49ca3a3577ce1524da81e325fc2a264e 443 Gene3D G3DSA:1.20.1250.20 239 438 1.7E-31 T 18-10-2018 CH53_2922 affbaeac915c32925e6458099c134d71 158 Gene3D G3DSA:1.10.1660.10 1 125 1.5E-31 T 18-10-2018 CH53_2922 affbaeac915c32925e6458099c134d71 158 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.3E-5 T 18-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CH53_2922 affbaeac915c32925e6458099c134d71 158 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.3E-5 T 18-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CH53_2922 affbaeac915c32925e6458099c134d71 158 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.3E-5 T 18-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CH53_2922 affbaeac915c32925e6458099c134d71 158 SMART SM00422 1 70 3.8E-29 T 18-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CH53_2922 affbaeac915c32925e6458099c134d71 158 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.6E-19 T 18-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CH53_2922 affbaeac915c32925e6458099c134d71 158 SUPERFAMILY SSF46955 1 126 6.96E-35 T 18-10-2018 IPR009061 Putative DNA-binding domain superfamily CH53_2922 affbaeac915c32925e6458099c134d71 158 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 8.5E-57 T 18-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 CH53_1827 95887177c283af69ca7efab5965e76e3 91 Pfam PF01192 RNA polymerase Rpb6 10 60 8.2E-17 T 18-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CH53_1827 95887177c283af69ca7efab5965e76e3 91 Gene3D G3DSA:3.90.940.10 1 91 1.3E-30 T 18-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CH53_1827 95887177c283af69ca7efab5965e76e3 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 2.1E-28 T 18-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_1827 95887177c283af69ca7efab5965e76e3 91 SMART SM01409 8 61 1.0E-16 T 18-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CH53_1827 95887177c283af69ca7efab5965e76e3 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.134 T 18-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_1827 95887177c283af69ca7efab5965e76e3 91 SUPERFAMILY SSF63562 1 79 2.44E-25 T 18-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CH53_3655 e6b226522cdc1076398f42cc670b61fb 108 SUPERFAMILY SSF54427 7 92 5.09E-11 T 18-10-2018 IPR032710 NTF2-like domain superfamily CH53_3655 e6b226522cdc1076398f42cc670b61fb 108 Gene3D G3DSA:3.10.450.50 2 107 2.1E-31 T 18-10-2018 CH53_3655 e6b226522cdc1076398f42cc670b61fb 108 Pfam PF12680 SnoaL-like domain 11 88 8.7E-10 T 18-10-2018 IPR037401 SnoaL-like domain CH53_73 ba2aa7c0265ab41d426136b3765818a3 311 Pfam PF03466 LysR substrate binding domain 88 280 7.8E-16 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_73 ba2aa7c0265ab41d426136b3765818a3 311 Gene3D G3DSA:1.10.10.10 2 90 4.0E-24 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_73 ba2aa7c0265ab41d426136b3765818a3 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 5.4E-20 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_73 ba2aa7c0265ab41d426136b3765818a3 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.4E-5 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_73 ba2aa7c0265ab41d426136b3765818a3 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.4E-5 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_73 ba2aa7c0265ab41d426136b3765818a3 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.4E-5 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_73 ba2aa7c0265ab41d426136b3765818a3 311 SUPERFAMILY SSF46785 3 88 3.63E-23 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_73 ba2aa7c0265ab41d426136b3765818a3 311 SUPERFAMILY SSF53850 106 291 2.35E-18 T 18-10-2018 CH53_73 ba2aa7c0265ab41d426136b3765818a3 311 Gene3D G3DSA:3.40.190.290 94 284 3.7E-9 T 18-10-2018 CH53_2419 aa20506a65745cf5411dc54d1ace5e8a 461 Gene3D G3DSA:1.20.1740.10 9 458 1.9E-58 T 18-10-2018 CH53_2419 aa20506a65745cf5411dc54d1ace5e8a 461 Pfam PF13520 Amino acid permease 14 422 3.6E-38 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_2419 aa20506a65745cf5411dc54d1ace5e8a 461 PIRSF PIRSF006060 1 460 4.4E-71 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_2419 aa20506a65745cf5411dc54d1ace5e8a 461 TIGRFAM TIGR00908 2A0305: ethanolamine permease 7 451 3.5E-194 T 18-10-2018 IPR004757 Ethanolamine permease CH53_3592 fdb242e68830a302be6e1caa70db07ac 169 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 168 3.0E-99 T 18-10-2018 IPR022523 Flagellar regulator, FliZ CH53_3592 fdb242e68830a302be6e1caa70db07ac 169 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 91 167 1.6E-8 T 18-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CH53_3270 16189e07ea93bd032c17d5da66332a4b 330 Pfam PF13407 Periplasmic binding protein domain 27 298 5.3E-64 T 18-10-2018 IPR025997 Periplasmic binding protein CH53_3270 16189e07ea93bd032c17d5da66332a4b 330 SUPERFAMILY SSF53822 24 329 1.59E-84 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_3270 16189e07ea93bd032c17d5da66332a4b 330 Gene3D G3DSA:3.40.50.2300 133 278 6.1E-121 T 18-10-2018 CH53_3270 16189e07ea93bd032c17d5da66332a4b 330 Gene3D G3DSA:3.40.50.2300 27 301 6.1E-121 T 18-10-2018 CH53_3522 52b1395e8092c7bc2b80bace6b692b08 336 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 11 336 5.4E-149 T 18-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 CH53_3522 52b1395e8092c7bc2b80bace6b692b08 336 SMART SM00829 20 334 1.9E-55 T 18-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CH53_3522 52b1395e8092c7bc2b80bace6b692b08 336 SUPERFAMILY SSF50129 11 149 5.17E-38 T 18-10-2018 IPR011032 GroES-like superfamily CH53_3522 52b1395e8092c7bc2b80bace6b692b08 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 114 6.9E-10 T 18-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CH53_3522 52b1395e8092c7bc2b80bace6b692b08 336 Gene3D G3DSA:3.90.180.10 23 334 1.2E-105 T 18-10-2018 CH53_3522 52b1395e8092c7bc2b80bace6b692b08 336 SUPERFAMILY SSF51735 121 298 5.77E-50 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3522 52b1395e8092c7bc2b80bace6b692b08 336 Gene3D G3DSA:3.40.50.720 130 273 1.2E-105 T 18-10-2018 CH53_3522 52b1395e8092c7bc2b80bace6b692b08 336 Pfam PF00107 Zinc-binding dehydrogenase 161 285 9.1E-27 T 18-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CH53_1082 347d0656beab103bb12e650845c624d0 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 313 4.4E-101 T 18-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CH53_1082 347d0656beab103bb12e650845c624d0 317 Gene3D G3DSA:3.20.20.70 2 317 7.0E-148 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_1082 347d0656beab103bb12e650845c624d0 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 18-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CH53_1082 347d0656beab103bb12e650845c624d0 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 18-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CH53_1082 347d0656beab103bb12e650845c624d0 317 SUPERFAMILY SSF51569 1 316 2.62E-115 T 18-10-2018 CH53_1082 347d0656beab103bb12e650845c624d0 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 3.6E-163 T 18-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CH53_1082 347d0656beab103bb12e650845c624d0 317 Hamap MF_00492 Transaldolase [tal]. 2 317 51.728 T 18-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CH53_646 f80a8c8af6724ba34e0d2d44db60fc5b 409 PIRSF PIRSF005572 7 389 2.1E-138 T 18-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CH53_646 f80a8c8af6724ba34e0d2d44db60fc5b 409 Gene3D G3DSA:3.40.640.10 21 267 1.0E-167 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_646 f80a8c8af6724ba34e0d2d44db60fc5b 409 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 202 221 - T 18-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CH53_646 f80a8c8af6724ba34e0d2d44db60fc5b 409 Pfam PF00266 Aminotransferase class-V 10 373 1.2E-87 T 18-10-2018 IPR000192 Aminotransferase class V domain CH53_646 f80a8c8af6724ba34e0d2d44db60fc5b 409 SUPERFAMILY SSF53383 8 395 1.58E-115 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_646 f80a8c8af6724ba34e0d2d44db60fc5b 409 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 6 409 9.3E-230 T 18-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CH53_646 f80a8c8af6724ba34e0d2d44db60fc5b 409 Gene3D G3DSA:3.90.1150.10 10 381 1.0E-167 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_646 f80a8c8af6724ba34e0d2d44db60fc5b 409 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 6 400 54.362 T 18-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 Gene3D G3DSA:3.30.70.1440 658 857 1.7E-233 T 18-10-2018 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 Gene3D G3DSA:3.30.2090.10 184 273 1.7E-233 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 Gene3D G3DSA:3.30.70.1430 558 657 1.7E-233 T 18-10-2018 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 Gene3D G3DSA:1.20.1640.10 507 1009 1.7E-233 T 18-10-2018 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 SUPERFAMILY SSF82693 45 140 4.19E-18 T 18-10-2018 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 Gene3D G3DSA:3.30.70.1430 45 805 1.7E-233 T 18-10-2018 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 SUPERFAMILY SSF82714 710 795 8.63E-14 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 Gene3D G3DSA:1.20.1640.10 18 506 1.7E-233 T 18-10-2018 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 5.0E-18 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 5.0E-18 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 5.0E-18 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 5.0E-18 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 5.0E-18 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 5.0E-18 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 SUPERFAMILY SSF82714 190 271 1.44E-12 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 Gene3D G3DSA:3.30.70.1320 141 331 1.7E-233 T 18-10-2018 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 SUPERFAMILY SSF82693 557 607 1.53E-6 T 18-10-2018 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 SUPERFAMILY SSF82866 794 1017 1.09E-40 T 18-10-2018 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 SUPERFAMILY SSF82693 142 329 1.2E-14 T 18-10-2018 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 SUPERFAMILY SSF82866 298 493 2.75E-35 T 18-10-2018 CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 Gene3D G3DSA:3.30.2090.10 709 797 1.7E-233 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_3022 d046c024fd515149e9e8cbd7bd9cd10e 1031 Pfam PF00873 AcrB/AcrD/AcrF family 9 1011 2.4E-151 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_3043 0969144dc71c2cfdfbadbcda5f60253e 236 Pfam PF13649 Methyltransferase domain 38 120 5.1E-11 T 18-10-2018 CH53_3043 0969144dc71c2cfdfbadbcda5f60253e 236 Gene3D G3DSA:3.40.50.150 6 222 2.8E-25 T 18-10-2018 CH53_3043 0969144dc71c2cfdfbadbcda5f60253e 236 SUPERFAMILY SSF53335 10 205 4.76E-28 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_636 d2638b228401fdf137f9bf55d6f1b40c 1674 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 770 917 1.9E-14 T 18-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CH53_636 d2638b228401fdf137f9bf55d6f1b40c 1674 SMART SM01359 769 917 8.2E-38 T 18-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CH53_636 d2638b228401fdf137f9bf55d6f1b40c 1674 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 299 391 2.7E-21 T 18-10-2018 CH53_636 d2638b228401fdf137f9bf55d6f1b40c 1674 Pfam PF01835 MG2 domain 398 489 2.0E-21 T 18-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 CH53_636 d2638b228401fdf137f9bf55d6f1b40c 1674 Gene3D G3DSA:1.50.10.20 1186 1447 6.4E-28 T 18-10-2018 CH53_636 d2638b228401fdf137f9bf55d6f1b40c 1674 PIRSF PIRSF038980 7 1674 0.0 T 18-10-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria CH53_636 d2638b228401fdf137f9bf55d6f1b40c 1674 SMART SM01360 982 1071 2.6E-19 T 18-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 CH53_636 d2638b228401fdf137f9bf55d6f1b40c 1674 SUPERFAMILY SSF48239 1191 1447 8.52E-38 T 18-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CH53_636 d2638b228401fdf137f9bf55d6f1b40c 1674 Pfam PF00207 Alpha-2-macroglobulin family 989 1070 6.1E-8 T 18-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 CH53_636 d2638b228401fdf137f9bf55d6f1b40c 1674 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1196 1214 8.7E-5 T 18-10-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming CH53_636 d2638b228401fdf137f9bf55d6f1b40c 1674 Gene3D G3DSA:2.60.40.1930 398 493 9.2E-8 T 18-10-2018 CH53_2725 1f1729ed802c6ed6b89ee71f048a8b07 252 SUPERFAMILY SSF64005 15 238 1.15E-86 T 18-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 CH53_2725 1f1729ed802c6ed6b89ee71f048a8b07 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 242 5.0E-79 T 18-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CH53_2725 1f1729ed802c6ed6b89ee71f048a8b07 252 Gene3D G3DSA:3.40.1180.10 5 244 7.4E-92 T 18-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 CH53_2725 1f1729ed802c6ed6b89ee71f048a8b07 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 18-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 CH53_2725 1f1729ed802c6ed6b89ee71f048a8b07 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 15 242 8.4E-102 T 18-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CH53_2725 1f1729ed802c6ed6b89ee71f048a8b07 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 243 39.861 T 18-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CH53_3988 62493743e9e2ea623a92e277ed485619 513 Gene3D G3DSA:3.30.450.40 2 170 9.8E-17 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_3988 62493743e9e2ea623a92e277ed485619 513 Pfam PF00158 Sigma-54 interaction domain 192 357 3.9E-64 T 18-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CH53_3988 62493743e9e2ea623a92e277ed485619 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 277 292 - T 18-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH53_3988 62493743e9e2ea623a92e277ed485619 513 Pfam PF01590 GAF domain 22 155 4.8E-11 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_3988 62493743e9e2ea623a92e277ed485619 513 SUPERFAMILY SSF52540 190 425 1.16E-64 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3988 62493743e9e2ea623a92e277ed485619 513 SMART SM00382 211 354 1.1E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3988 62493743e9e2ea623a92e277ed485619 513 SUPERFAMILY SSF55781 22 170 1.24E-16 T 18-10-2018 CH53_3988 62493743e9e2ea623a92e277ed485619 513 Gene3D G3DSA:1.10.10.60 459 513 7.6E-9 T 18-10-2018 CH53_3988 62493743e9e2ea623a92e277ed485619 513 SUPERFAMILY SSF46689 459 511 2.87E-7 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3988 62493743e9e2ea623a92e277ed485619 513 Gene3D G3DSA:3.40.50.300 177 361 5.3E-62 T 18-10-2018 CH53_3988 62493743e9e2ea623a92e277ed485619 513 Gene3D G3DSA:1.10.8.60 362 427 3.5E-20 T 18-10-2018 CH53_3988 62493743e9e2ea623a92e277ed485619 513 SMART SM00065 20 167 1.1E-14 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_3988 62493743e9e2ea623a92e277ed485619 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 404 413 - T 18-10-2018 IPR025944 Sigma-54 interaction domain, conserved site CH53_3988 62493743e9e2ea623a92e277ed485619 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 215 228 - T 18-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH53_2861 1a8259a33c2c24cbc5a15b9d4a4f8685 207 SUPERFAMILY SSF52096 23 206 3.13E-74 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CH53_2861 1a8259a33c2c24cbc5a15b9d4a4f8685 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 2.3E-108 T 18-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CH53_2861 1a8259a33c2c24cbc5a15b9d4a4f8685 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 18-10-2018 IPR033135 ClpP, histidine active site CH53_2861 1a8259a33c2c24cbc5a15b9d4a4f8685 207 Gene3D G3DSA:3.90.226.10 6 207 1.4E-83 T 18-10-2018 CH53_2861 1a8259a33c2c24cbc5a15b9d4a4f8685 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 1.2E-52 T 18-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CH53_2861 1a8259a33c2c24cbc5a15b9d4a4f8685 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 1.2E-52 T 18-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CH53_2861 1a8259a33c2c24cbc5a15b9d4a4f8685 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 1.2E-52 T 18-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CH53_2861 1a8259a33c2c24cbc5a15b9d4a4f8685 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 1.2E-52 T 18-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CH53_2861 1a8259a33c2c24cbc5a15b9d4a4f8685 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 1.2E-52 T 18-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CH53_2861 1a8259a33c2c24cbc5a15b9d4a4f8685 207 Pfam PF00574 Clp protease 25 205 8.1E-89 T 18-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CH53_2861 1a8259a33c2c24cbc5a15b9d4a4f8685 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 18-10-2018 IPR018215 ClpP, Ser active site CH53_2861 1a8259a33c2c24cbc5a15b9d4a4f8685 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.138 T 18-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CH53_3079 3049e9d6b29d35b882c3cfb83044a200 292 SMART SM00116 78 127 3.9 T 18-10-2018 IPR000644 CBS domain CH53_3079 3049e9d6b29d35b882c3cfb83044a200 292 SMART SM00116 141 189 3.7 T 18-10-2018 IPR000644 CBS domain CH53_3079 3049e9d6b29d35b882c3cfb83044a200 292 Pfam PF00571 CBS domain 69 123 5.3E-8 T 18-10-2018 IPR000644 CBS domain CH53_3079 3049e9d6b29d35b882c3cfb83044a200 292 Pfam PF00571 CBS domain 143 189 9.6E-5 T 18-10-2018 IPR000644 CBS domain CH53_3079 3049e9d6b29d35b882c3cfb83044a200 292 SUPERFAMILY SSF54631 66 202 4.3E-32 T 18-10-2018 CH53_3079 3049e9d6b29d35b882c3cfb83044a200 292 Gene3D G3DSA:3.30.465.10 198 292 3.9E-34 T 18-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CH53_3079 3049e9d6b29d35b882c3cfb83044a200 292 Gene3D G3DSA:3.10.580.10 51 197 4.0E-56 T 18-10-2018 CH53_3079 3049e9d6b29d35b882c3cfb83044a200 292 SUPERFAMILY SSF56176 203 289 1.01E-23 T 18-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CH53_3079 3049e9d6b29d35b882c3cfb83044a200 292 Pfam PF03471 Transporter associated domain 206 281 8.0E-22 T 18-10-2018 IPR005170 Transporter-associated domain CH53_3079 3049e9d6b29d35b882c3cfb83044a200 292 SMART SM01091 205 283 1.8E-29 T 18-10-2018 IPR005170 Transporter-associated domain CH53_2617 07bbeeb4c73213b17f2c5bb97c0bc1a7 437 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 18-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CH53_2617 07bbeeb4c73213b17f2c5bb97c0bc1a7 437 Gene3D G3DSA:3.90.230.10 172 437 3.7E-105 T 18-10-2018 CH53_2617 07bbeeb4c73213b17f2c5bb97c0bc1a7 437 Gene3D G3DSA:3.40.350.10 1 171 5.6E-63 T 18-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CH53_2617 07bbeeb4c73213b17f2c5bb97c0bc1a7 437 Pfam PF00557 Metallopeptidase family M24 181 412 3.4E-66 T 18-10-2018 IPR000994 Peptidase M24 CH53_2617 07bbeeb4c73213b17f2c5bb97c0bc1a7 437 SUPERFAMILY SSF53092 1 174 2.62E-52 T 18-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CH53_2617 07bbeeb4c73213b17f2c5bb97c0bc1a7 437 SMART SM01011 1 136 2.1E-54 T 18-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CH53_2617 07bbeeb4c73213b17f2c5bb97c0bc1a7 437 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 126 5.0E-35 T 18-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CH53_2617 07bbeeb4c73213b17f2c5bb97c0bc1a7 437 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 269 6.2E-5 T 18-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CH53_2617 07bbeeb4c73213b17f2c5bb97c0bc1a7 437 PRINTS PR00599 Methionine aminopeptidase-1 signature 371 383 6.2E-5 T 18-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CH53_2617 07bbeeb4c73213b17f2c5bb97c0bc1a7 437 SUPERFAMILY SSF55920 175 434 4.71E-88 T 18-10-2018 IPR036005 Creatinase/aminopeptidase-like CH53_2418 c8beb5a04c9447fb6c4284e102c122b3 855 Pfam PF05228 CHASE4 domain 68 226 3.5E-17 T 18-10-2018 IPR007892 CHASE4 CH53_2418 c8beb5a04c9447fb6c4284e102c122b3 855 Gene3D G3DSA:3.20.20.450 606 852 4.3E-95 T 18-10-2018 IPR035919 EAL domain superfamily CH53_2418 c8beb5a04c9447fb6c4284e102c122b3 855 SMART SM00267 420 592 5.8E-67 T 18-10-2018 IPR000160 GGDEF domain CH53_2418 c8beb5a04c9447fb6c4284e102c122b3 855 Gene3D G3DSA:3.30.450.20 296 425 3.4E-17 T 18-10-2018 CH53_2418 c8beb5a04c9447fb6c4284e102c122b3 855 Gene3D G3DSA:3.30.70.270 426 605 2.0E-59 T 18-10-2018 CH53_2418 c8beb5a04c9447fb6c4284e102c122b3 855 Pfam PF00990 Diguanylate cyclase, GGDEF domain 432 588 5.4E-50 T 18-10-2018 IPR000160 GGDEF domain CH53_2418 c8beb5a04c9447fb6c4284e102c122b3 855 SMART SM00091 308 373 6.5E-8 T 18-10-2018 IPR000014 PAS domain CH53_2418 c8beb5a04c9447fb6c4284e102c122b3 855 SMART SM00052 602 844 7.1E-112 T 18-10-2018 IPR001633 EAL domain CH53_2418 c8beb5a04c9447fb6c4284e102c122b3 855 Pfam PF00563 EAL domain 610 839 7.2E-72 T 18-10-2018 IPR001633 EAL domain CH53_2418 c8beb5a04c9447fb6c4284e102c122b3 855 SUPERFAMILY SSF141868 608 851 4.05E-87 T 18-10-2018 IPR035919 EAL domain superfamily CH53_2418 c8beb5a04c9447fb6c4284e102c122b3 855 Pfam PF00989 PAS fold 308 417 3.7E-6 T 18-10-2018 IPR013767 PAS fold GO:0006355 CH53_2418 c8beb5a04c9447fb6c4284e102c122b3 855 SUPERFAMILY SSF55785 301 418 3.14E-18 T 18-10-2018 IPR035965 PAS domain superfamily CH53_2418 c8beb5a04c9447fb6c4284e102c122b3 855 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 306 426 1.5E-12 T 18-10-2018 IPR000014 PAS domain CH53_2418 c8beb5a04c9447fb6c4284e102c122b3 855 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 427 589 2.7E-44 T 18-10-2018 IPR000160 GGDEF domain CH53_2418 c8beb5a04c9447fb6c4284e102c122b3 855 SUPERFAMILY SSF55073 436 594 3.06E-51 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_3349 ef816e2510eea80cb65c5abf5e68a4be 258 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 239 5.3E-92 T 18-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_3349 ef816e2510eea80cb65c5abf5e68a4be 258 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 18-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_3349 ef816e2510eea80cb65c5abf5e68a4be 258 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 215 9.3E-41 T 18-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CH53_3349 ef816e2510eea80cb65c5abf5e68a4be 258 Gene3D G3DSA:3.30.950.10 120 253 2.2E-44 T 18-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CH53_3349 ef816e2510eea80cb65c5abf5e68a4be 258 SUPERFAMILY SSF53790 2 240 3.4E-74 T 18-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CH53_3349 ef816e2510eea80cb65c5abf5e68a4be 258 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 18-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_3349 ef816e2510eea80cb65c5abf5e68a4be 258 Gene3D G3DSA:3.40.1010.10 2 119 1.8E-39 T 18-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CH53_3230 192cc14e5d48784b6ab0f7778e487859 276 Gene3D G3DSA:3.40.190.10 98 237 1.4E-18 T 18-10-2018 CH53_3230 192cc14e5d48784b6ab0f7778e487859 276 SUPERFAMILY SSF53850 79 237 1.04E-13 T 18-10-2018 CH53_3230 192cc14e5d48784b6ab0f7778e487859 276 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 98 251 6.0E-20 T 18-10-2018 CH53_3230 192cc14e5d48784b6ab0f7778e487859 276 Gene3D G3DSA:3.40.190.10 100 207 1.4E-18 T 18-10-2018 CH53_3881 4d75994d6870e914e1750ca85ed09b27 486 Gene3D G3DSA:3.30.870.10 111 311 8.4E-36 T 18-10-2018 CH53_3881 4d75994d6870e914e1750ca85ed09b27 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 2.3E-7 T 18-10-2018 IPR027379 Cardiolipin synthase N-terminal CH53_3881 4d75994d6870e914e1750ca85ed09b27 486 SUPERFAMILY SSF56024 274 473 3.81E-49 T 18-10-2018 CH53_3881 4d75994d6870e914e1750ca85ed09b27 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 52.287 T 18-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 CH53_3881 4d75994d6870e914e1750ca85ed09b27 486 SMART SM00155 219 246 0.001 T 18-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CH53_3881 4d75994d6870e914e1750ca85ed09b27 486 SMART SM00155 399 426 7.3E-5 T 18-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CH53_3881 4d75994d6870e914e1750ca85ed09b27 486 Gene3D G3DSA:3.30.870.10 316 458 7.1E-26 T 18-10-2018 CH53_3881 4d75994d6870e914e1750ca85ed09b27 486 SUPERFAMILY SSF56024 67 315 1.28E-47 T 18-10-2018 CH53_3881 4d75994d6870e914e1750ca85ed09b27 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 3.5E-207 T 18-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 CH53_3881 4d75994d6870e914e1750ca85ed09b27 486 Pfam PF13091 PLD-like domain 135 244 3.3E-11 T 18-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CH53_3881 4d75994d6870e914e1750ca85ed09b27 486 Pfam PF13091 PLD-like domain 332 448 6.6E-24 T 18-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CH53_404 ff5a509d61ccbe3890e6c13e59892e1f 260 Gene3D G3DSA:3.40.190.10 29 252 1.2E-85 T 18-10-2018 CH53_404 ff5a509d61ccbe3890e6c13e59892e1f 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 18-10-2018 IPR018313 Solute-binding protein family 3, conserved site CH53_404 ff5a509d61ccbe3890e6c13e59892e1f 260 SUPERFAMILY SSF53850 4 257 1.09E-64 T 18-10-2018 CH53_404 ff5a509d61ccbe3890e6c13e59892e1f 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 8.3E-62 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_404 ff5a509d61ccbe3890e6c13e59892e1f 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 253 1.3E-94 T 18-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 CH53_404 ff5a509d61ccbe3890e6c13e59892e1f 260 Gene3D G3DSA:3.40.190.10 113 213 1.2E-85 T 18-10-2018 CH53_404 ff5a509d61ccbe3890e6c13e59892e1f 260 SMART SM00062 27 256 7.6E-72 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3946 8711cc2ee9b35d2e99562383c96062de 523 SUPERFAMILY SSF52540 18 241 3.11E-58 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3946 8711cc2ee9b35d2e99562383c96062de 523 ProSitePatterns PS00211 ABC transporters family signature. 412 426 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3946 8711cc2ee9b35d2e99562383c96062de 523 Pfam PF00005 ABC transporter 286 439 2.6E-18 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3946 8711cc2ee9b35d2e99562383c96062de 523 SMART SM00382 293 488 9.6E-5 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3946 8711cc2ee9b35d2e99562383c96062de 523 SMART SM00382 44 232 1.2E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3946 8711cc2ee9b35d2e99562383c96062de 523 SUPERFAMILY SSF52540 285 498 1.71E-43 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3946 8711cc2ee9b35d2e99562383c96062de 523 Gene3D G3DSA:3.40.50.300 279 516 2.1E-41 T 18-10-2018 CH53_3946 8711cc2ee9b35d2e99562383c96062de 523 Pfam PF00005 ABC transporter 35 184 5.6E-34 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3946 8711cc2ee9b35d2e99562383c96062de 523 Gene3D G3DSA:3.40.50.300 4 256 2.3E-59 T 18-10-2018 CH53_724 21d5d9e15b50163755db4c2aac7564f9 330 Gene3D G3DSA:1.10.3430.10 8 329 5.7E-98 T 18-10-2018 IPR029020 Ammonium/urea transporter CH53_724 21d5d9e15b50163755db4c2aac7564f9 330 Pfam PF03253 Urea transporter 24 320 2.9E-91 T 18-10-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 CH53_724 21d5d9e15b50163755db4c2aac7564f9 330 PIRSF PIRSF016502 7 330 2.7E-103 T 18-10-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 CH53_724 21d5d9e15b50163755db4c2aac7564f9 330 TIGRFAM TIGR03441 urea_trans_yut: urea transporter 21 319 9.1E-109 T 18-10-2018 IPR017807 Urea transporter, bacteria GO:0015204|GO:0016021|GO:0071918 CH53_1318 2daed637628aedb2e08012e9880c9e55 655 ProSitePatterns PS00786 5'-nucleotidase signature 2. 116 127 - T 18-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_1318 2daed637628aedb2e08012e9880c9e55 655 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 557 1.9E-21 T 18-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_1318 2daed637628aedb2e08012e9880c9e55 655 SUPERFAMILY SSF56300 25 360 3.13E-85 T 18-10-2018 CH53_1318 2daed637628aedb2e08012e9880c9e55 655 Gene3D G3DSA:3.60.21.10 23 361 2.8E-144 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like CH53_1318 2daed637628aedb2e08012e9880c9e55 655 ProSitePatterns PS00785 5'-nucleotidase signature 1. 31 43 - T 18-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_1318 2daed637628aedb2e08012e9880c9e55 655 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 18-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 CH53_1318 2daed637628aedb2e08012e9880c9e55 655 Pfam PF00149 Calcineurin-like phosphoesterase 31 266 4.6E-11 T 18-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CH53_1318 2daed637628aedb2e08012e9880c9e55 655 Gene3D G3DSA:3.90.780.10 405 596 3.5E-50 T 18-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_1318 2daed637628aedb2e08012e9880c9e55 655 PRINTS PR01607 Apyrase family signature 537 556 1.0E-31 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_1318 2daed637628aedb2e08012e9880c9e55 655 PRINTS PR01607 Apyrase family signature 290 310 1.0E-31 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_1318 2daed637628aedb2e08012e9880c9e55 655 PRINTS PR01607 Apyrase family signature 29 47 1.0E-31 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_1318 2daed637628aedb2e08012e9880c9e55 655 PRINTS PR01607 Apyrase family signature 250 273 1.0E-31 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_1318 2daed637628aedb2e08012e9880c9e55 655 PRINTS PR01607 Apyrase family signature 222 239 1.0E-31 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_1318 2daed637628aedb2e08012e9880c9e55 655 PRINTS PR01607 Apyrase family signature 435 458 1.0E-31 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_1318 2daed637628aedb2e08012e9880c9e55 655 SUPERFAMILY SSF55816 362 603 7.72E-39 T 18-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_1069 b3eb55e21446e70d3fe51210d4f3c01b 166 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 15 112 2.6E-12 T 18-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CH53_1069 b3eb55e21446e70d3fe51210d4f3c01b 166 Gene3D G3DSA:2.40.10.330 83 139 4.2E-39 T 18-10-2018 CH53_1069 b3eb55e21446e70d3fe51210d4f3c01b 166 SUPERFAMILY SSF54534 15 153 8.25E-34 T 18-10-2018 CH53_1069 b3eb55e21446e70d3fe51210d4f3c01b 166 Gene3D G3DSA:3.10.50.40 24 152 4.2E-39 T 18-10-2018 CH53_2643 526a2420754bc5d1929b4cea15d1175f 414 SUPERFAMILY SSF55785 153 254 6.44E-17 T 18-10-2018 IPR035965 PAS domain superfamily CH53_2643 526a2420754bc5d1929b4cea15d1175f 414 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 413 4.2E-48 T 18-10-2018 IPR000160 GGDEF domain CH53_2643 526a2420754bc5d1929b4cea15d1175f 414 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 131 253 7.9E-16 T 18-10-2018 IPR000014 PAS domain CH53_2643 526a2420754bc5d1929b4cea15d1175f 414 Gene3D G3DSA:3.30.450.20 137 255 2.1E-18 T 18-10-2018 CH53_2643 526a2420754bc5d1929b4cea15d1175f 414 Pfam PF13426 PAS domain 17 93 0.46 T 18-10-2018 IPR000014 PAS domain CH53_2643 526a2420754bc5d1929b4cea15d1175f 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 257 410 4.7E-45 T 18-10-2018 IPR000160 GGDEF domain CH53_2643 526a2420754bc5d1929b4cea15d1175f 414 SMART SM00267 246 414 3.1E-58 T 18-10-2018 IPR000160 GGDEF domain CH53_2643 526a2420754bc5d1929b4cea15d1175f 414 SMART SM00091 3 70 29.0 T 18-10-2018 IPR000014 PAS domain CH53_2643 526a2420754bc5d1929b4cea15d1175f 414 SMART SM00091 133 202 8.7E-7 T 18-10-2018 IPR000014 PAS domain CH53_2643 526a2420754bc5d1929b4cea15d1175f 414 Gene3D G3DSA:3.30.70.270 256 414 4.3E-54 T 18-10-2018 CH53_2643 526a2420754bc5d1929b4cea15d1175f 414 Pfam PF08448 PAS fold 152 248 5.5E-10 T 18-10-2018 IPR013656 PAS fold-4 CH53_2643 526a2420754bc5d1929b4cea15d1175f 414 SUPERFAMILY SSF55073 262 413 4.0E-47 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_1400 c221b136c874c81bbb7871d65e03f34c 265 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1400 c221b136c874c81bbb7871d65e03f34c 265 Pfam PF00005 ABC transporter 26 175 8.1E-26 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1400 c221b136c874c81bbb7871d65e03f34c 265 SMART SM00382 35 224 1.2E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1400 c221b136c874c81bbb7871d65e03f34c 265 SUPERFAMILY SSF52540 9 241 3.33E-58 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1400 c221b136c874c81bbb7871d65e03f34c 265 Gene3D G3DSA:3.40.50.300 2 265 1.4E-79 T 18-10-2018 CH53_2500 0834550ebca9fcc76de57af381837f08 274 Pfam PF01380 SIS domain 121 228 2.2E-18 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_2500 0834550ebca9fcc76de57af381837f08 274 Gene3D G3DSA:3.40.50.10490 89 272 4.5E-42 T 18-10-2018 CH53_2500 0834550ebca9fcc76de57af381837f08 274 SUPERFAMILY SSF46689 4 80 1.0E-17 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_2500 0834550ebca9fcc76de57af381837f08 274 Gene3D G3DSA:1.10.10.10 2 80 1.7E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2500 0834550ebca9fcc76de57af381837f08 274 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 77 7.2E-15 T 18-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CH53_2500 0834550ebca9fcc76de57af381837f08 274 SUPERFAMILY SSF53697 94 254 7.23E-31 T 18-10-2018 CH53_3390 3ab37584195f4f0f1da49640404b8ab1 248 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 248 45.544 T 18-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 CH53_3390 3ab37584195f4f0f1da49640404b8ab1 248 Pfam PF02654 Cobalamin-5-phosphate synthase 10 245 1.8E-50 T 18-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 CH53_3390 3ab37584195f4f0f1da49640404b8ab1 248 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 5 247 5.9E-61 T 18-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 CH53_4299 9ae3df994027fb8d8382c254a1df109f 145 SUPERFAMILY SSF52402 2 145 1.42E-27 T 18-10-2018 CH53_4299 9ae3df994027fb8d8382c254a1df109f 145 Gene3D G3DSA:3.40.50.620 1 145 1.0E-38 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_4299 9ae3df994027fb8d8382c254a1df109f 145 PRINTS PR01438 Universal stress protein signature 2 20 2.8E-11 T 18-10-2018 IPR006015 Universal stress protein A CH53_4299 9ae3df994027fb8d8382c254a1df109f 145 PRINTS PR01438 Universal stress protein signature 106 118 2.8E-11 T 18-10-2018 IPR006015 Universal stress protein A CH53_4299 9ae3df994027fb8d8382c254a1df109f 145 PRINTS PR01438 Universal stress protein signature 123 145 2.8E-11 T 18-10-2018 IPR006015 Universal stress protein A CH53_4299 9ae3df994027fb8d8382c254a1df109f 145 PIRSF PIRSF006276 1 145 3.4E-18 T 18-10-2018 IPR006015 Universal stress protein A CH53_4299 9ae3df994027fb8d8382c254a1df109f 145 Pfam PF00582 Universal stress protein family 1 145 5.0E-25 T 18-10-2018 IPR006016 UspA CH53_2932 a72b4a0c8926111069ebe25d9a11d647 240 SUPERFAMILY SSF56300 3 237 1.54E-33 T 18-10-2018 CH53_2932 a72b4a0c8926111069ebe25d9a11d647 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 3.1E-103 T 18-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CH53_2932 a72b4a0c8926111069ebe25d9a11d647 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 128.278 T 18-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CH53_2932 a72b4a0c8926111069ebe25d9a11d647 240 Gene3D G3DSA:3.60.21.10 1 234 2.0E-19 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like CH53_2932 a72b4a0c8926111069ebe25d9a11d647 240 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 1.1E-9 T 18-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CH53_995 b0c1993597980946d392de7e6f7079a0 887 SUPERFAMILY SSF52518 474 701 1.41E-99 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_995 b0c1993597980946d392de7e6f7079a0 887 Gene3D G3DSA:3.40.50.920 707 887 5.8E-74 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CH53_995 b0c1993597980946d392de7e6f7079a0 887 PIRSF PIRSF000156 1 887 0.0 T 18-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CH53_995 b0c1993597980946d392de7e6f7079a0 887 Gene3D G3DSA:3.40.50.970 57 471 7.1E-136 T 18-10-2018 CH53_995 b0c1993597980946d392de7e6f7079a0 887 SUPERFAMILY SSF52922 702 885 1.39E-62 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CH53_995 b0c1993597980946d392de7e6f7079a0 887 SUPERFAMILY SSF52518 59 469 1.35E-142 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_995 b0c1993597980946d392de7e6f7079a0 887 Gene3D G3DSA:3.40.50.970 472 706 1.5E-112 T 18-10-2018 CH53_995 b0c1993597980946d392de7e6f7079a0 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 362 457 4.4E-5 T 18-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CH53_995 b0c1993597980946d392de7e6f7079a0 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 111 295 4.9E-8 T 18-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CH53_995 b0c1993597980946d392de7e6f7079a0 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 18-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CH53_555 b49b6f88575a8f460d09f803ab251ad0 199 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 10 193 5.8E-105 T 18-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 CH53_555 b49b6f88575a8f460d09f803ab251ad0 199 PIRSF PIRSF000013 1 199 6.2E-108 T 18-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 CH53_555 b49b6f88575a8f460d09f803ab251ad0 199 SUPERFAMILY SSF48695 16 195 3.46E-64 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily CH53_555 b49b6f88575a8f460d09f803ab251ad0 199 Gene3D G3DSA:1.10.3820.10 18 195 1.4E-39 T 18-10-2018 IPR038266 NapC/NirT cytochrome c superfamily CH53_555 b49b6f88575a8f460d09f803ab251ad0 199 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 21 192 7.0E-79 T 18-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal CH53_1259 ffc1b170f0838795b0660411cea09a39 239 SMART SM00382 37 230 5.8E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1259 ffc1b170f0838795b0660411cea09a39 239 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1259 ffc1b170f0838795b0660411cea09a39 239 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 6 227 1.5E-108 T 18-10-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CH53_1259 ffc1b170f0838795b0660411cea09a39 239 Gene3D G3DSA:3.40.50.300 5 228 4.1E-49 T 18-10-2018 CH53_1259 ffc1b170f0838795b0660411cea09a39 239 Pfam PF00005 ABC transporter 28 182 1.7E-28 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1259 ffc1b170f0838795b0660411cea09a39 239 SUPERFAMILY SSF52540 4 227 1.56E-46 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2814 3cacf19f04f166602231b5b8ef21deb8 185 Gene3D G3DSA:3.40.50.150 16 174 2.0E-12 T 18-10-2018 CH53_2814 3cacf19f04f166602231b5b8ef21deb8 185 SUPERFAMILY SSF53335 14 159 2.7E-16 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_1697 abf48c01d8b65cb1223c29c25a126bbd 190 Gene3D G3DSA:1.10.340.30 3 189 3.7E-86 T 18-10-2018 CH53_1697 abf48c01d8b65cb1223c29c25a126bbd 190 SUPERFAMILY SSF48150 4 186 3.37E-81 T 18-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CH53_1697 abf48c01d8b65cb1223c29c25a126bbd 190 Pfam PF03352 Methyladenine glycosylase 8 184 1.2E-78 T 18-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 CH53_1697 abf48c01d8b65cb1223c29c25a126bbd 190 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 4 183 5.7E-83 T 18-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 CH53_3402 96a778a03d59dee07d93504e2eb3372c 279 Gene3D G3DSA:3.20.20.70 1 279 1.5E-125 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3402 96a778a03d59dee07d93504e2eb3372c 279 SUPERFAMILY SSF51366 39 265 4.08E-19 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CH53_3108 f8b550ec17ee78b6943eb11d14bd6315 263 Pfam PF12697 Alpha/beta hydrolase family 19 246 1.4E-19 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_3108 f8b550ec17ee78b6943eb11d14bd6315 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 1.5E-5 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_3108 f8b550ec17ee78b6943eb11d14bd6315 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 1.5E-5 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_3108 f8b550ec17ee78b6943eb11d14bd6315 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 1.5E-5 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_3108 f8b550ec17ee78b6943eb11d14bd6315 263 Gene3D G3DSA:3.40.50.1820 3 253 3.6E-74 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_3108 f8b550ec17ee78b6943eb11d14bd6315 263 SUPERFAMILY SSF53474 2 253 1.86E-52 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_680 ef27bd927dc2e62fb3cb9f72b807fea9 226 Gene3D G3DSA:3.30.160.20 154 224 2.7E-20 T 18-10-2018 CH53_680 ef27bd927dc2e62fb3cb9f72b807fea9 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 18-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CH53_680 ef27bd927dc2e62fb3cb9f72b807fea9 226 SUPERFAMILY SSF54768 109 223 1.27E-27 T 18-10-2018 CH53_680 ef27bd927dc2e62fb3cb9f72b807fea9 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 8.9E-74 T 18-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CH53_680 ef27bd927dc2e62fb3cb9f72b807fea9 226 Gene3D G3DSA:1.10.1520.10 4 146 1.2E-43 T 18-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 CH53_680 ef27bd927dc2e62fb3cb9f72b807fea9 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 3.0E-15 T 18-10-2018 IPR014720 Double-stranded RNA-binding domain CH53_680 ef27bd927dc2e62fb3cb9f72b807fea9 226 SMART SM00535 21 149 2.6E-55 T 18-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CH53_680 ef27bd927dc2e62fb3cb9f72b807fea9 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.439 T 18-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CH53_680 ef27bd927dc2e62fb3cb9f72b807fea9 226 SMART SM00358 156 224 1.5E-23 T 18-10-2018 IPR014720 Double-stranded RNA-binding domain CH53_680 ef27bd927dc2e62fb3cb9f72b807fea9 226 Pfam PF14622 Ribonuclease-III-like 20 140 3.3E-33 T 18-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CH53_680 ef27bd927dc2e62fb3cb9f72b807fea9 226 SUPERFAMILY SSF69065 5 159 5.58E-49 T 18-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 CH53_3935 cfb5ff7e3e42ff8d1a234baff51d5688 207 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 186 4.0E-84 T 18-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 CH53_3935 cfb5ff7e3e42ff8d1a234baff51d5688 207 Pfam PF04060 Putative Fe-S cluster 44 76 6.1E-14 T 18-10-2018 IPR007202 4Fe-4S domain GO:0051536 CH53_3935 cfb5ff7e3e42ff8d1a234baff51d5688 207 SUPERFAMILY SSF54862 38 175 1.01E-29 T 18-10-2018 CH53_3935 cfb5ff7e3e42ff8d1a234baff51d5688 207 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_3935 cfb5ff7e3e42ff8d1a234baff51d5688 207 Pfam PF14697 4Fe-4S dicluster domain 110 164 4.0E-17 T 18-10-2018 CH53_3935 cfb5ff7e3e42ff8d1a234baff51d5688 207 PIRSF PIRSF005784 3 190 3.6E-84 T 18-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CH53_3935 cfb5ff7e3e42ff8d1a234baff51d5688 207 Gene3D G3DSA:3.20.20.20 37 101 6.9E-13 T 18-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_3935 cfb5ff7e3e42ff8d1a234baff51d5688 207 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 169 25.425 T 18-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 CH53_3935 cfb5ff7e3e42ff8d1a234baff51d5688 207 Gene3D G3DSA:3.30.70.20 102 137 3.3E-7 T 18-10-2018 CH53_3935 cfb5ff7e3e42ff8d1a234baff51d5688 207 Gene3D G3DSA:3.30.70.20 139 183 5.3E-7 T 18-10-2018 CH53_1472 9c9c08750d71fedab94e7b0fcd94eebe 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 1.0E-43 T 18-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1472 9c9c08750d71fedab94e7b0fcd94eebe 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.133 T 18-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1472 9c9c08750d71fedab94e7b0fcd94eebe 117 Gene3D G3DSA:3.30.420.100 1 117 3.0E-46 T 18-10-2018 CH53_1472 9c9c08750d71fedab94e7b0fcd94eebe 117 SUPERFAMILY SSF53137 3 115 4.14E-53 T 18-10-2018 CH53_1472 9c9c08750d71fedab94e7b0fcd94eebe 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 6.5E-46 T 18-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2868 3833480b1186429f260cde772733c986 232 SUPERFAMILY SSF52402 1 221 4.41E-67 T 18-10-2018 CH53_2868 3833480b1186429f260cde772733c986 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 213 9.4E-82 T 18-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CH53_2868 3833480b1186429f260cde772733c986 232 PIRSF PIRSF006293 1 226 2.0E-83 T 18-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CH53_2868 3833480b1186429f260cde772733c986 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 220 50.805 T 18-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CH53_2868 3833480b1186429f260cde772733c986 232 Gene3D G3DSA:3.40.50.620 1 232 1.3E-82 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_2868 3833480b1186429f260cde772733c986 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 207 3.1E-83 T 18-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CH53_1371 0d661bb841a25102ebfc6ab26cad7cdc 715 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 2 53 6.7E-14 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_1371 0d661bb841a25102ebfc6ab26cad7cdc 715 Pfam PF00384 Molybdopterin oxidoreductase 61 486 3.2E-95 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_1371 0d661bb841a25102ebfc6ab26cad7cdc 715 Pfam PF01568 Molydopterin dinucleotide binding domain 574 681 9.3E-28 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CH53_1371 0d661bb841a25102ebfc6ab26cad7cdc 715 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 433 450 - T 18-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CH53_1371 0d661bb841a25102ebfc6ab26cad7cdc 715 PIRSF PIRSF000144 54 438 2.5E-59 T 18-10-2018 CH53_1371 0d661bb841a25102ebfc6ab26cad7cdc 715 PIRSF PIRSF000144 536 691 7.4 T 18-10-2018 CH53_1371 0d661bb841a25102ebfc6ab26cad7cdc 715 Gene3D G3DSA:3.40.228.10 142 340 3.9E-174 T 18-10-2018 CH53_1371 0d661bb841a25102ebfc6ab26cad7cdc 715 Gene3D G3DSA:3.40.50.740 67 530 3.9E-174 T 18-10-2018 CH53_1371 0d661bb841a25102ebfc6ab26cad7cdc 715 SUPERFAMILY SSF53706 1 561 1.3E-193 T 18-10-2018 CH53_1371 0d661bb841a25102ebfc6ab26cad7cdc 715 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 6 684 6.7E-270 T 18-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 CH53_1371 0d661bb841a25102ebfc6ab26cad7cdc 715 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 23 - T 18-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 CH53_1371 0d661bb841a25102ebfc6ab26cad7cdc 715 SMART SM00926 1 54 3.0E-15 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_1371 0d661bb841a25102ebfc6ab26cad7cdc 715 Gene3D G3DSA:2.20.25.90 1 55 4.4E-17 T 18-10-2018 CH53_1371 0d661bb841a25102ebfc6ab26cad7cdc 715 SUPERFAMILY SSF50692 564 701 1.67E-41 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CH53_1371 0d661bb841a25102ebfc6ab26cad7cdc 715 Gene3D G3DSA:2.40.40.20 571 687 6.0E-41 T 18-10-2018 CH53_696 986424c618b6aa7e59007b68dadca19e 293 Gene3D G3DSA:2.60.200.30 129 265 1.5E-100 T 18-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CH53_696 986424c618b6aa7e59007b68dadca19e 293 Hamap MF_00361 NAD kinase [nadK]. 7 288 33.778 T 18-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CH53_696 986424c618b6aa7e59007b68dadca19e 293 Gene3D G3DSA:3.40.50.10330 24 288 1.5E-100 T 18-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 CH53_696 986424c618b6aa7e59007b68dadca19e 293 SUPERFAMILY SSF111331 9 290 1.1E-93 T 18-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CH53_696 986424c618b6aa7e59007b68dadca19e 293 Pfam PF01513 ATP-NAD kinase 9 272 9.9E-77 T 18-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CH53_1502 2fc7240092c58ed00345cf04d643e070 196 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 112 2.3E-8 T 18-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CH53_1502 2fc7240092c58ed00345cf04d643e070 196 Gene3D G3DSA:3.10.50.40 3 154 7.0E-60 T 18-10-2018 CH53_1502 2fc7240092c58ed00345cf04d643e070 196 SUPERFAMILY SSF54534 2 140 1.14E-31 T 18-10-2018 CH53_1502 2fc7240092c58ed00345cf04d643e070 196 Gene3D G3DSA:2.40.10.330 71 121 7.0E-60 T 18-10-2018 CH53_2918 0570614bff95555480bdaf982925a7d0 550 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 18-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_2918 0570614bff95555480bdaf982925a7d0 550 PRINTS PR01607 Apyrase family signature 484 503 3.3E-61 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_2918 0570614bff95555480bdaf982925a7d0 550 PRINTS PR01607 Apyrase family signature 238 261 3.3E-61 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_2918 0570614bff95555480bdaf982925a7d0 550 PRINTS PR01607 Apyrase family signature 207 224 3.3E-61 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_2918 0570614bff95555480bdaf982925a7d0 550 PRINTS PR01607 Apyrase family signature 283 303 3.3E-61 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_2918 0570614bff95555480bdaf982925a7d0 550 PRINTS PR01607 Apyrase family signature 417 440 3.3E-61 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_2918 0570614bff95555480bdaf982925a7d0 550 PRINTS PR01607 Apyrase family signature 32 50 3.3E-61 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_2918 0570614bff95555480bdaf982925a7d0 550 SUPERFAMILY SSF55816 363 542 6.28E-54 T 18-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_2918 0570614bff95555480bdaf982925a7d0 550 Gene3D G3DSA:3.90.780.10 363 549 3.9E-62 T 18-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_2918 0570614bff95555480bdaf982925a7d0 550 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 18-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_2918 0570614bff95555480bdaf982925a7d0 550 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 509 6.3E-36 T 18-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CH53_2918 0570614bff95555480bdaf982925a7d0 550 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 2.1E-16 T 18-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CH53_2918 0570614bff95555480bdaf982925a7d0 550 Gene3D G3DSA:3.60.21.10 26 362 1.1E-132 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like CH53_2918 0570614bff95555480bdaf982925a7d0 550 SUPERFAMILY SSF56300 27 361 3.57E-97 T 18-10-2018 CH53_405 b87c87bbc0cac4889352f320c5f5b57b 190 Gene3D G3DSA:3.40.50.1950 2 190 3.1E-77 T 18-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CH53_405 b87c87bbc0cac4889352f320c5f5b57b 190 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 2.3E-69 T 18-10-2018 IPR004507 Flavin prenyltransferase UbiX-like CH53_405 b87c87bbc0cac4889352f320c5f5b57b 190 SUPERFAMILY SSF52507 2 187 3.79E-58 T 18-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CH53_405 b87c87bbc0cac4889352f320c5f5b57b 190 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 36.689 T 18-10-2018 IPR004507 Flavin prenyltransferase UbiX-like CH53_405 b87c87bbc0cac4889352f320c5f5b57b 190 Pfam PF02441 Flavoprotein 2 165 1.1E-24 T 18-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CH53_488 1faaf5b50ef8b1b7991f2b960123c3c6 465 Gene3D G3DSA:3.20.20.80 1 462 1.2E-153 T 18-10-2018 CH53_488 1faaf5b50ef8b1b7991f2b960123c3c6 465 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 18-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CH53_488 1faaf5b50ef8b1b7991f2b960123c3c6 465 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 358 366 - T 18-10-2018 IPR018120 Glycoside hydrolase family 1, active site CH53_488 1faaf5b50ef8b1b7991f2b960123c3c6 465 Pfam PF00232 Glycosyl hydrolase family 1 2 460 6.2E-153 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_488 1faaf5b50ef8b1b7991f2b960123c3c6 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 6.4E-17 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_488 1faaf5b50ef8b1b7991f2b960123c3c6 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 358 366 6.4E-17 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_488 1faaf5b50ef8b1b7991f2b960123c3c6 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 379 390 6.4E-17 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_488 1faaf5b50ef8b1b7991f2b960123c3c6 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 400 417 6.4E-17 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_488 1faaf5b50ef8b1b7991f2b960123c3c6 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 425 437 6.4E-17 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_488 1faaf5b50ef8b1b7991f2b960123c3c6 465 SUPERFAMILY SSF51445 4 462 9.77E-163 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_115 81ed82a8175b2d089162619cd949604c 358 SUPERFAMILY SSF56925 22 206 9.94E-39 T 18-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CH53_115 81ed82a8175b2d089162619cd949604c 358 Gene3D G3DSA:3.30.1330.60 211 355 2.2E-53 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_115 81ed82a8175b2d089162619cd949604c 358 Gene3D G3DSA:2.40.160.20 22 203 2.9E-69 T 18-10-2018 CH53_115 81ed82a8175b2d089162619cd949604c 358 ProSitePatterns PS01068 OmpA-like domain. 269 313 - T 18-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CH53_115 81ed82a8175b2d089162619cd949604c 358 PRINTS PR01022 Outer membrane protein A signature 113 129 8.6E-62 T 18-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CH53_115 81ed82a8175b2d089162619cd949604c 358 PRINTS PR01022 Outer membrane protein A signature 223 238 8.6E-62 T 18-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CH53_115 81ed82a8175b2d089162619cd949604c 358 PRINTS PR01022 Outer membrane protein A signature 252 271 8.6E-62 T 18-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CH53_115 81ed82a8175b2d089162619cd949604c 358 PRINTS PR01022 Outer membrane protein A signature 291 310 8.6E-62 T 18-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CH53_115 81ed82a8175b2d089162619cd949604c 358 PRINTS PR01022 Outer membrane protein A signature 176 190 8.6E-62 T 18-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CH53_115 81ed82a8175b2d089162619cd949604c 358 PRINTS PR01022 Outer membrane protein A signature 325 338 8.6E-62 T 18-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CH53_115 81ed82a8175b2d089162619cd949604c 358 PRINTS PR01022 Outer membrane protein A signature 190 204 8.6E-62 T 18-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CH53_115 81ed82a8175b2d089162619cd949604c 358 Pfam PF01389 OmpA-like transmembrane domain 23 205 1.8E-69 T 18-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 CH53_115 81ed82a8175b2d089162619cd949604c 358 Pfam PF00691 OmpA family 234 327 3.3E-19 T 18-10-2018 IPR006665 OmpA-like domain CH53_115 81ed82a8175b2d089162619cd949604c 358 PRINTS PR01021 OMPA domain signature 282 298 1.8E-20 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CH53_115 81ed82a8175b2d089162619cd949604c 358 PRINTS PR01021 OMPA domain signature 235 257 1.8E-20 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CH53_115 81ed82a8175b2d089162619cd949604c 358 PRINTS PR01021 OMPA domain signature 267 282 1.8E-20 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CH53_115 81ed82a8175b2d089162619cd949604c 358 SUPERFAMILY SSF103088 221 346 7.19E-32 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_2996 c028f780d5a49694e9e34d4238598fd5 129 Gene3D G3DSA:3.30.1380.10 6 123 3.6E-18 T 18-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CH53_2996 c028f780d5a49694e9e34d4238598fd5 129 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 56 123 2.5E-16 T 18-10-2018 IPR039561 Peptidase M15C GO:0008233 CH53_2996 c028f780d5a49694e9e34d4238598fd5 129 SUPERFAMILY SSF55166 4 123 1.12E-24 T 18-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CH53_4381 16e1fc77479283321a4fb324e5855cd2 107 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 1 100 27.256 T 18-10-2018 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 CH53_4381 16e1fc77479283321a4fb324e5855cd2 107 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 31 99 4.0E-23 T 18-10-2018 CH53_4381 16e1fc77479283321a4fb324e5855cd2 107 Pfam PF06411 HdeA/HdeB family 27 94 1.9E-18 T 18-10-2018 IPR010486 HNS-dependent expression A/B CH53_4381 16e1fc77479283321a4fb324e5855cd2 107 SUPERFAMILY SSF47752 32 94 4.58E-5 T 18-10-2018 IPR036831 HNS-dependent expression A superfamily GO:0030288|GO:0071468 CH53_4381 16e1fc77479283321a4fb324e5855cd2 107 Gene3D G3DSA:1.10.890.10 27 103 4.8E-33 T 18-10-2018 IPR038303 HNS-dependent expression A/B superfamily CH53_1886 d7eb4dfd0dacba1a49f161ec58f33747 300 Gene3D G3DSA:3.30.70.1350 207 290 5.3E-34 T 18-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CH53_1886 d7eb4dfd0dacba1a49f161ec58f33747 300 Pfam PF01545 Cation efflux family 19 206 7.0E-46 T 18-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CH53_1886 d7eb4dfd0dacba1a49f161ec58f33747 300 Gene3D G3DSA:1.20.1510.10 8 206 1.3E-67 T 18-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CH53_1886 d7eb4dfd0dacba1a49f161ec58f33747 300 SUPERFAMILY SSF161111 9 207 1.44E-52 T 18-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CH53_1886 d7eb4dfd0dacba1a49f161ec58f33747 300 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 60.982 T 18-10-2018 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 CH53_1886 d7eb4dfd0dacba1a49f161ec58f33747 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 1.4E-25 T 18-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain CH53_1886 d7eb4dfd0dacba1a49f161ec58f33747 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 288 7.9E-76 T 18-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CH53_1886 d7eb4dfd0dacba1a49f161ec58f33747 300 SUPERFAMILY SSF160240 209 288 8.89E-26 T 18-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CH53_1852 83ee66c897e2a102031bc4476c87c4fd 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.3E-24 T 18-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CH53_1852 83ee66c897e2a102031bc4476c87c4fd 238 SUPERFAMILY SSF54211 1 181 3.44E-44 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_1852 83ee66c897e2a102031bc4476c87c4fd 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 2.5E-110 T 18-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CH53_1852 83ee66c897e2a102031bc4476c87c4fd 238 SUPERFAMILY SSF55666 153 237 3.4E-25 T 18-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CH53_1852 83ee66c897e2a102031bc4476c87c4fd 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 18-10-2018 IPR018336 Ribonuclease PH, conserved site CH53_1852 83ee66c897e2a102031bc4476c87c4fd 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 45.198 T 18-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CH53_1852 83ee66c897e2a102031bc4476c87c4fd 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 222 5.7E-10 T 18-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CH53_1852 83ee66c897e2a102031bc4476c87c4fd 238 Gene3D G3DSA:3.30.230.70 10 238 2.2E-64 T 18-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 210 673 1.2E-239 T 18-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 225 334 3.9E-35 T 18-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 Pfam PF13247 4Fe-4S dicluster domain 55 153 2.2E-7 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 SUPERFAMILY SSF51971 346 602 7.65E-66 T 18-10-2018 CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 Gene3D G3DSA:3.50.50.60 447 601 1.3E-43 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 PRINTS PR00419 Adrenodoxin reductase family signature 372 385 1.7E-34 T 18-10-2018 CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 PRINTS PR00419 Adrenodoxin reductase family signature 414 424 1.7E-34 T 18-10-2018 CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 PRINTS PR00419 Adrenodoxin reductase family signature 525 538 1.7E-34 T 18-10-2018 CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 PRINTS PR00419 Adrenodoxin reductase family signature 349 371 1.7E-34 T 18-10-2018 CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 PRINTS PR00419 Adrenodoxin reductase family signature 491 505 1.7E-34 T 18-10-2018 CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 348 660 4.0E-18 T 18-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 SUPERFAMILY SSF54862 2 311 1.46E-44 T 18-10-2018 CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 Gene3D G3DSA:1.10.1060.10 210 346 5.2E-32 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 Gene3D G3DSA:3.30.70.20 5 162 9.8E-27 T 18-10-2018 CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 Gene3D G3DSA:3.30.70.20 62 127 9.8E-27 T 18-10-2018 CH53_1373 e90517b1de6cabcf47821c282c4fe41d 674 Gene3D G3DSA:3.50.50.60 347 411 1.6E-8 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_4001 c9b1aa2b41e952b91235fa07613064d1 486 Hamap MF_01932 AMP nucleosidase [amn]. 5 486 57.984 T 18-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CH53_4001 c9b1aa2b41e952b91235fa07613064d1 486 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 14 169 3.7E-50 T 18-10-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CH53_4001 c9b1aa2b41e952b91235fa07613064d1 486 Gene3D G3DSA:3.40.50.1580 175 486 4.3E-113 T 18-10-2018 CH53_4001 c9b1aa2b41e952b91235fa07613064d1 486 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 13 486 2.8E-224 T 18-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CH53_4001 c9b1aa2b41e952b91235fa07613064d1 486 Gene3D G3DSA:3.30.1730.10 3 174 5.2E-60 T 18-10-2018 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CH53_4001 c9b1aa2b41e952b91235fa07613064d1 486 SUPERFAMILY SSF53167 11 486 3.53E-157 T 18-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CH53_4001 c9b1aa2b41e952b91235fa07613064d1 486 Pfam PF01048 Phosphorylase superfamily 271 433 2.0E-18 T 18-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CH53_3332 9074c2b57d008834214bfa9dff0a335a 441 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 10 430 40.738 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CH53_3332 9074c2b57d008834214bfa9dff0a335a 441 Gene3D G3DSA:3.40.50.1980 237 352 3.1E-122 T 18-10-2018 CH53_3332 9074c2b57d008834214bfa9dff0a335a 441 SUPERFAMILY SSF53720 10 430 6.87E-85 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CH53_3332 9074c2b57d008834214bfa9dff0a335a 441 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 429 2.7E-159 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CH53_3332 9074c2b57d008834214bfa9dff0a335a 441 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 18-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 CH53_3332 9074c2b57d008834214bfa9dff0a335a 441 PIRSF PIRSF000099 3 433 6.6E-167 T 18-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CH53_3332 9074c2b57d008834214bfa9dff0a335a 441 PRINTS PR00083 Histidinol dehydrogenase signature 112 139 1.2E-99 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CH53_3332 9074c2b57d008834214bfa9dff0a335a 441 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 1.2E-99 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CH53_3332 9074c2b57d008834214bfa9dff0a335a 441 PRINTS PR00083 Histidinol dehydrogenase signature 323 348 1.2E-99 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CH53_3332 9074c2b57d008834214bfa9dff0a335a 441 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 1.2E-99 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CH53_3332 9074c2b57d008834214bfa9dff0a335a 441 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 1.2E-99 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CH53_3332 9074c2b57d008834214bfa9dff0a335a 441 PRINTS PR00083 Histidinol dehydrogenase signature 364 382 1.2E-99 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CH53_3332 9074c2b57d008834214bfa9dff0a335a 441 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 1.2E-99 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CH53_3332 9074c2b57d008834214bfa9dff0a335a 441 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 1.2E-99 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CH53_3332 9074c2b57d008834214bfa9dff0a335a 441 Gene3D G3DSA:3.40.50.1980 36 235 3.1E-122 T 18-10-2018 CH53_3332 9074c2b57d008834214bfa9dff0a335a 441 Pfam PF00815 Histidinol dehydrogenase 31 430 5.6E-165 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CH53_1386 5a1b7ddc6be1f71cb92b5ec044e44b72 302 SUPERFAMILY SSF53697 8 251 3.11E-74 T 18-10-2018 CH53_1386 5a1b7ddc6be1f71cb92b5ec044e44b72 302 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 43.411 T 18-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 CH53_1386 5a1b7ddc6be1f71cb92b5ec044e44b72 302 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 18-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 CH53_1386 5a1b7ddc6be1f71cb92b5ec044e44b72 302 Pfam PF13580 SIS domain 43 167 1.1E-13 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_1386 5a1b7ddc6be1f71cb92b5ec044e44b72 302 Gene3D G3DSA:3.40.50.10490 1 220 4.5E-84 T 18-10-2018 CH53_1386 5a1b7ddc6be1f71cb92b5ec044e44b72 302 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 6.7E-135 T 18-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 CH53_1386 5a1b7ddc6be1f71cb92b5ec044e44b72 302 Gene3D G3DSA:1.10.8.1080 221 299 5.7E-31 T 18-10-2018 CH53_2877 db9dcd6e14d6f14e1b09cd8fc21f3988 286 SUPERFAMILY SSF54637 6 114 3.84E-41 T 18-10-2018 IPR029069 HotDog domain superfamily CH53_2877 db9dcd6e14d6f14e1b09cd8fc21f3988 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 13 283 3.5E-100 T 18-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 CH53_2877 db9dcd6e14d6f14e1b09cd8fc21f3988 286 SUPERFAMILY SSF54637 116 283 4.06E-61 T 18-10-2018 IPR029069 HotDog domain superfamily CH53_2877 db9dcd6e14d6f14e1b09cd8fc21f3988 286 Pfam PF13622 Thioesterase-like superfamily 33 282 2.0E-59 T 18-10-2018 CH53_2877 db9dcd6e14d6f14e1b09cd8fc21f3988 286 Gene3D G3DSA:3.10.129.90 1 286 8.9E-115 T 18-10-2018 CH53_3664 072bc4762c5b435583c96f272d14e5ef 78 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 1 73 4.3E-13 T 18-10-2018 IPR006522 Phage virion morphogensis protein CH53_3664 072bc4762c5b435583c96f272d14e5ef 78 Pfam PF05069 Phage virion morphogenesis family 1 76 5.0E-17 T 18-10-2018 IPR006522 Phage virion morphogensis protein CH53_3348 c2981d5fbfedacbb88daf6335000d790 357 Gene3D G3DSA:3.90.1150.10 22 350 1.1E-119 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_3348 c2981d5fbfedacbb88daf6335000d790 357 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 4 351 8.2E-103 T 18-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 CH53_3348 c2981d5fbfedacbb88daf6335000d790 357 Gene3D G3DSA:3.40.640.10 34 259 1.1E-119 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_3348 c2981d5fbfedacbb88daf6335000d790 357 SUPERFAMILY SSF53383 3 353 4.92E-78 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_3348 c2981d5fbfedacbb88daf6335000d790 357 Pfam PF00155 Aminotransferase class I and II 21 350 1.3E-42 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_3348 c2981d5fbfedacbb88daf6335000d790 357 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 210 223 - T 18-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CH53_2130 0463b8d4650da67e70ee15c6ecfce0c0 279 Gene3D G3DSA:3.30.450.40 99 278 4.1E-66 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_2130 0463b8d4650da67e70ee15c6ecfce0c0 279 Gene3D G3DSA:1.10.10.10 11 88 3.3E-19 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2130 0463b8d4650da67e70ee15c6ecfce0c0 279 SMART SM00346 27 117 1.5E-33 T 18-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CH53_2130 0463b8d4650da67e70ee15c6ecfce0c0 279 SUPERFAMILY SSF55781 98 274 4.64E-50 T 18-10-2018 CH53_2130 0463b8d4650da67e70ee15c6ecfce0c0 279 Pfam PF01614 Bacterial transcriptional regulator 148 271 4.2E-40 T 18-10-2018 IPR014757 Transcription regulator IclR, C-terminal CH53_2130 0463b8d4650da67e70ee15c6ecfce0c0 279 Pfam PF09339 IclR helix-turn-helix domain 29 79 8.1E-18 T 18-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CH53_2130 0463b8d4650da67e70ee15c6ecfce0c0 279 SUPERFAMILY SSF46785 27 100 1.08E-14 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2737 c962a0c472e573903620ff95afa77272 713 SUPERFAMILY SSF55904 567 708 6.28E-39 T 18-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 CH53_2737 c962a0c472e573903620ff95afa77272 713 PIRSF PIRSF009393 1 712 3.9E-273 T 18-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CH53_2737 c962a0c472e573903620ff95afa77272 713 Gene3D G3DSA:3.40.50.2300 1 129 7.5E-53 T 18-10-2018 CH53_2737 c962a0c472e573903620ff95afa77272 713 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.2E-41 T 18-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CH53_2737 c962a0c472e573903620ff95afa77272 713 Gene3D G3DSA:3.90.1150.10 425 594 4.0E-69 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_2737 c962a0c472e573903620ff95afa77272 713 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 2.8E-186 T 18-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CH53_2737 c962a0c472e573903620ff95afa77272 713 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 18-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CH53_2737 c962a0c472e573903620ff95afa77272 713 Gene3D G3DSA:3.90.100.10 595 713 1.1E-41 T 18-10-2018 CH53_2737 c962a0c472e573903620ff95afa77272 713 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 3.7E-27 T 18-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CH53_2737 c962a0c472e573903620ff95afa77272 713 SUPERFAMILY SSF53383 130 562 8.66E-102 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_2737 c962a0c472e573903620ff95afa77272 713 Gene3D G3DSA:3.40.640.10 130 424 2.1E-89 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_3555 436222efb77c31585b5e2898f2bc6ed6 251 SUPERFAMILY SSF117143 77 209 1.83E-18 T 18-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CH53_3555 436222efb77c31585b5e2898f2bc6ed6 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 247 4.0E-21 T 18-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH53_3555 436222efb77c31585b5e2898f2bc6ed6 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 8.6E-35 T 18-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CH53_3555 436222efb77c31585b5e2898f2bc6ed6 251 Pfam PF00460 Flagella basal body rod protein 5 35 1.8E-9 T 18-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 Pfam PF01627 Hpt domain 9 104 1.0E-18 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 SUPERFAMILY SSF55052 168 231 2.25E-20 T 18-10-2018 IPR035891 CheY-binding domain of CheA CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 SUPERFAMILY SSF47226 7 126 4.36E-29 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 539 7.2E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 Gene3D G3DSA:3.30.565.10 356 539 8.7E-51 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 518 2.3E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 537 2.3E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 2.3E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 494 2.3E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 Pfam PF09078 CheY binding 169 231 2.0E-25 T 18-10-2018 IPR015162 CheY binding CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 SUPERFAMILY SSF47384 293 356 4.32E-15 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 293 355 1.0E-16 T 18-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 Gene3D G3DSA:1.10.287.560 292 355 1.4E-16 T 18-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 SMART SM00073 5 102 9.7E-28 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 SUPERFAMILY SSF55874 358 538 1.31E-31 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 Gene3D G3DSA:1.20.120.160 1 141 3.5E-44 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 SUPERFAMILY SSF50341 539 671 4.97E-31 T 18-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 SMART SM01231 292 355 2.7E-20 T 18-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 Gene3D G3DSA:2.40.50.180 563 627 3.0E-38 T 18-10-2018 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 SMART SM00387 400 540 6.4E-24 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 Gene3D G3DSA:3.30.70.400 163 236 4.8E-27 T 18-10-2018 IPR035891 CheY-binding domain of CheA CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 SMART SM00260 532 672 2.6E-42 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 Pfam PF01584 CheW-like domain 545 671 3.5E-25 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CH53_3536 fcf512577bc37722507c9cb6c4eccd4b 688 Gene3D G3DSA:2.30.30.40 540 668 3.0E-38 T 18-10-2018 CH53_3993 261d2a721ecb1d4468826e1e91b118aa 240 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 232 2.3E-16 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_3993 261d2a721ecb1d4468826e1e91b118aa 240 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 22 88 6.8E-14 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CH53_3993 261d2a721ecb1d4468826e1e91b118aa 240 Gene3D G3DSA:1.10.3720.10 17 234 3.0E-39 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3993 261d2a721ecb1d4468826e1e91b118aa 240 SUPERFAMILY SSF161098 21 219 2.09E-31 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1266 2a94eec07e4aaac2738b8572a8c68641 438 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 36.425 T 18-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 CH53_1266 2a94eec07e4aaac2738b8572a8c68641 438 Pfam PF13520 Amino acid permease 9 415 1.0E-46 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_1266 2a94eec07e4aaac2738b8572a8c68641 438 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 429 6.6E-142 T 18-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CH53_1266 2a94eec07e4aaac2738b8572a8c68641 438 PIRSF PIRSF006060 1 436 1.3E-47 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_1266 2a94eec07e4aaac2738b8572a8c68641 438 Gene3D G3DSA:1.20.1740.10 1 436 2.6E-57 T 18-10-2018 CH53_1266 2a94eec07e4aaac2738b8572a8c68641 438 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 5 432 2.3E-240 T 18-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 CH53_2935 a9b239f10931a5fd6979e5755e17742c 111 Gene3D G3DSA:3.10.290.10 1 70 6.5E-25 T 18-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CH53_2935 a9b239f10931a5fd6979e5755e17742c 111 SUPERFAMILY SSF55174 6 69 8.24E-18 T 18-10-2018 CH53_2935 a9b239f10931a5fd6979e5755e17742c 111 Pfam PF13275 S4 domain 8 68 1.3E-21 T 18-10-2018 CH53_559 4d1c4161b8eb3a3f34cc6810add6cb6f 167 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 27 164 22.986 T 18-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 CH53_559 4d1c4161b8eb3a3f34cc6810add6cb6f 167 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_559 4d1c4161b8eb3a3f34cc6810add6cb6f 167 Gene3D G3DSA:3.30.70.20 104 166 5.6E-10 T 18-10-2018 CH53_559 4d1c4161b8eb3a3f34cc6810add6cb6f 167 Gene3D G3DSA:3.30.70.20 36 103 7.0E-8 T 18-10-2018 CH53_559 4d1c4161b8eb3a3f34cc6810add6cb6f 167 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 6 159 2.6E-47 T 18-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 CH53_559 4d1c4161b8eb3a3f34cc6810add6cb6f 167 Pfam PF12838 4Fe-4S dicluster domain 110 157 3.6E-8 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_559 4d1c4161b8eb3a3f34cc6810add6cb6f 167 Pfam PF12838 4Fe-4S dicluster domain 39 85 5.9E-7 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_559 4d1c4161b8eb3a3f34cc6810add6cb6f 167 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 39 50 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_559 4d1c4161b8eb3a3f34cc6810add6cb6f 167 SUPERFAMILY SSF54862 35 161 6.91E-20 T 18-10-2018 CH53_1588 2232f726232b2a6cf8df42cdba4114de 438 Pfam PF02447 GntP family permease 1 437 7.4E-186 T 18-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CH53_1588 2232f726232b2a6cf8df42cdba4114de 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 2.2E-199 T 18-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CH53_1588 2232f726232b2a6cf8df42cdba4114de 438 PIRSF PIRSF002746 1 438 1.3E-162 T 18-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CH53_3763 51df1b1feafde327d2537c6bb7742828 420 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 2.0E-24 T 18-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CH53_3763 51df1b1feafde327d2537c6bb7742828 420 PIRSF PIRSF000445 1 420 3.9E-155 T 18-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CH53_3763 51df1b1feafde327d2537c6bb7742828 420 SUPERFAMILY SSF51735 162 315 1.14E-33 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3763 51df1b1feafde327d2537c6bb7742828 420 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 417 1.0E-158 T 18-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CH53_3763 51df1b1feafde327d2537c6bb7742828 420 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 1.2E-48 T 18-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CH53_3763 51df1b1feafde327d2537c6bb7742828 420 SUPERFAMILY SSF69075 317 418 8.5E-28 T 18-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CH53_3763 51df1b1feafde327d2537c6bb7742828 420 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.6E-48 T 18-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CH53_3763 51df1b1feafde327d2537c6bb7742828 420 SUPERFAMILY SSF69742 1 158 4.18E-47 T 18-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CH53_3763 51df1b1feafde327d2537c6bb7742828 420 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 18-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CH53_3763 51df1b1feafde327d2537c6bb7742828 420 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.735 T 18-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CH53_3763 51df1b1feafde327d2537c6bb7742828 420 Gene3D G3DSA:3.30.460.30 1 158 1.0E-57 T 18-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CH53_3763 51df1b1feafde327d2537c6bb7742828 420 Gene3D G3DSA:3.40.50.720 161 313 5.6E-44 T 18-10-2018 CH53_2319 e545348d741ff593b757a59a56f4d49c 166 Gene3D G3DSA:1.20.120.450 3 159 2.0E-25 T 18-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes CH53_2319 e545348d741ff593b757a59a56f4d49c 166 SUPERFAMILY SSF109854 9 157 2.38E-24 T 18-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes CH53_2319 e545348d741ff593b757a59a56f4d49c 166 Pfam PF05163 DinB family 1 161 4.3E-19 T 18-10-2018 IPR007837 DNA damage-inducible protein DinB CH53_1477 1adee07ee6b9102ef84ebed8092fb0c4 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 18-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1477 1adee07ee6b9102ef84ebed8092fb0c4 104 SUPERFAMILY SSF50104 4 99 2.95E-32 T 18-10-2018 IPR008991 Translation protein SH3-like domain superfamily CH53_1477 1adee07ee6b9102ef84ebed8092fb0c4 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 99 2.5E-22 T 18-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1477 1adee07ee6b9102ef84ebed8092fb0c4 104 SMART SM00739 4 31 0.0014 T 18-10-2018 IPR005824 KOW CH53_1477 1adee07ee6b9102ef84ebed8092fb0c4 104 Gene3D G3DSA:2.30.30.30 2 104 2.0E-39 T 18-10-2018 IPR014722 Ribosomal protein L2, domain 2 CH53_1477 1adee07ee6b9102ef84ebed8092fb0c4 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.82 T 18-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1477 1adee07ee6b9102ef84ebed8092fb0c4 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 2.0E-38 T 18-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_138 5eb5df0e54499e2cdcbaa3849491ff53 1485 SUPERFAMILY SSF52540 21 1433 1.94E-6 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_138 5eb5df0e54499e2cdcbaa3849491ff53 1485 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 8.3E-15 T 18-10-2018 CH53_138 5eb5df0e54499e2cdcbaa3849491ff53 1485 Pfam PF04310 MukB N-terminal 2 227 3.1E-124 T 18-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CH53_138 5eb5df0e54499e2cdcbaa3849491ff53 1485 Gene3D G3DSA:1.20.1060.30 667 778 1.6E-138 T 18-10-2018 CH53_138 5eb5df0e54499e2cdcbaa3849491ff53 1485 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.048 T 18-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CH53_138 5eb5df0e54499e2cdcbaa3849491ff53 1485 Gene3D G3DSA:3.40.1140.10 1 227 4.6E-102 T 18-10-2018 CH53_138 5eb5df0e54499e2cdcbaa3849491ff53 1485 PIRSF PIRSF005246 1 1481 0.0 T 18-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CH53_138 5eb5df0e54499e2cdcbaa3849491ff53 1485 Gene3D G3DSA:1.20.58.850 581 852 1.6E-138 T 18-10-2018 CH53_138 5eb5df0e54499e2cdcbaa3849491ff53 1485 SUPERFAMILY SSF52540 22 224 6.88E-24 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_138 5eb5df0e54499e2cdcbaa3849491ff53 1485 Gene3D G3DSA:1.20.58.850 620 830 1.6E-138 T 18-10-2018 CH53_138 5eb5df0e54499e2cdcbaa3849491ff53 1485 Gene3D G3DSA:3.40.1140.10 1383 1468 2.8E-38 T 18-10-2018 CH53_138 5eb5df0e54499e2cdcbaa3849491ff53 1485 Pfam PF16330 MukB hinge domain 645 810 4.6E-73 T 18-10-2018 IPR032520 MukB, hinge domain CH53_189 a251fb0534d000e8883c722ab8ff6c2c 336 Gene3D G3DSA:3.40.50.720 1 332 3.5E-57 T 18-10-2018 CH53_189 a251fb0534d000e8883c722ab8ff6c2c 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 232 7.3E-29 T 18-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CH53_189 a251fb0534d000e8883c722ab8ff6c2c 336 SUPERFAMILY SSF51735 1 333 1.27E-59 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1562 18e75c4ef9f57c86d05dfa6203926746 771 Pfam PF07664 Ferrous iron transport protein B C terminus 456 508 7.7E-22 T 18-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CH53_1562 18e75c4ef9f57c86d05dfa6203926746 771 Pfam PF07670 Nucleoside recognition 513 690 1.1E-36 T 18-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CH53_1562 18e75c4ef9f57c86d05dfa6203926746 771 Pfam PF07670 Nucleoside recognition 354 444 8.8E-13 T 18-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CH53_1562 18e75c4ef9f57c86d05dfa6203926746 771 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 688 1.5E-224 T 18-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CH53_1562 18e75c4ef9f57c86d05dfa6203926746 771 Pfam PF02421 Ferrous iron transport protein B 5 163 9.0E-65 T 18-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 CH53_1562 18e75c4ef9f57c86d05dfa6203926746 771 SUPERFAMILY SSF52540 4 182 4.48E-41 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1562 18e75c4ef9f57c86d05dfa6203926746 771 Gene3D G3DSA:3.40.50.300 1 167 8.6E-48 T 18-10-2018 CH53_290 1383e5d06e8bb057e4ed05773df0c1c4 54 ProDom PD027295 GP38 FLUMU BACTERIOPHAGE MU-LIKE ECS4978 SB12 PHAGE ORF10 PROPHAGE 1 42 5.0E-15 T 18-10-2018 IPR024400 Protein of unknown function DUF2635 CH53_290 1383e5d06e8bb057e4ed05773df0c1c4 54 Pfam PF10948 Protein of unknown function (DUF2635) 3 46 9.0E-23 T 18-10-2018 IPR024400 Protein of unknown function DUF2635 CH53_2809 b757a44072f5fa4fa1d1137db1f73e70 2876 Gene3D G3DSA:2.70.98.40 1551 1843 7.2E-76 T 18-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily CH53_2809 b757a44072f5fa4fa1d1137db1f73e70 2876 Gene3D G3DSA:2.70.98.40 2083 2379 8.7E-93 T 18-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily CH53_2809 b757a44072f5fa4fa1d1137db1f73e70 2876 SUPERFAMILY SSF74650 1552 1812 1.32E-73 T 18-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CH53_2809 b757a44072f5fa4fa1d1137db1f73e70 2876 Pfam PF10091 Putative glucoamylase 1303 1509 4.1E-14 T 18-10-2018 IPR019282 Domain of unknown function DUF2329 CH53_2809 b757a44072f5fa4fa1d1137db1f73e70 2876 Gene3D G3DSA:1.50.10.140 1366 1521 3.1E-12 T 18-10-2018 CH53_2809 b757a44072f5fa4fa1d1137db1f73e70 2876 Gene3D G3DSA:1.50.10.140 995 1153 2.6E-9 T 18-10-2018 CH53_2809 b757a44072f5fa4fa1d1137db1f73e70 2876 SUPERFAMILY SSF48208 2361 2872 8.16E-94 T 18-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 CH53_2809 b757a44072f5fa4fa1d1137db1f73e70 2876 SMART SM01068 1541 1599 5.8E-21 T 18-10-2018 IPR009342 Putative carbohydrate binding domain CH53_2809 b757a44072f5fa4fa1d1137db1f73e70 2876 SMART SM01068 2081 2146 1.4E-32 T 18-10-2018 IPR009342 Putative carbohydrate binding domain CH53_2809 b757a44072f5fa4fa1d1137db1f73e70 2876 Pfam PF06165 Glycosyltransferase family 36 1561 1809 7.6E-68 T 18-10-2018 IPR010383 Glycosyl hydrolase 94 CH53_2809 b757a44072f5fa4fa1d1137db1f73e70 2876 Pfam PF06165 Glycosyltransferase family 36 2104 2344 1.5E-79 T 18-10-2018 IPR010383 Glycosyl hydrolase 94 CH53_2809 b757a44072f5fa4fa1d1137db1f73e70 2876 Gene3D G3DSA:1.50.10.10 2388 2800 3.0E-191 T 18-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 CH53_2809 b757a44072f5fa4fa1d1137db1f73e70 2876 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2374 2800 1.5E-117 T 18-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain CH53_2809 b757a44072f5fa4fa1d1137db1f73e70 2876 Gene3D G3DSA:2.60.420.10 2383 2854 3.0E-191 T 18-10-2018 CH53_2809 b757a44072f5fa4fa1d1137db1f73e70 2876 SUPERFAMILY SSF74650 2081 2346 1.26E-86 T 18-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CH53_1308 4cab4ba3ea03bf8eaa0064678a96fe4e 337 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 193 1.5E-77 T 18-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CH53_1308 4cab4ba3ea03bf8eaa0064678a96fe4e 337 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 270 282 - T 18-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CH53_1308 4cab4ba3ea03bf8eaa0064678a96fe4e 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 4.4E-71 T 18-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CH53_1308 4cab4ba3ea03bf8eaa0064678a96fe4e 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 304 329 4.4E-71 T 18-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CH53_1308 4cab4ba3ea03bf8eaa0064678a96fe4e 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 4.4E-71 T 18-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CH53_1308 4cab4ba3ea03bf8eaa0064678a96fe4e 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 4.4E-71 T 18-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CH53_1308 4cab4ba3ea03bf8eaa0064678a96fe4e 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 4.4E-71 T 18-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CH53_1308 4cab4ba3ea03bf8eaa0064678a96fe4e 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 4.4E-71 T 18-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CH53_1308 4cab4ba3ea03bf8eaa0064678a96fe4e 337 PIRSF PIRSF000904 1 333 1.7E-120 T 18-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CH53_1308 4cab4ba3ea03bf8eaa0064678a96fe4e 337 SUPERFAMILY SSF56655 2 327 1.69E-109 T 18-10-2018 CH53_1308 4cab4ba3ea03bf8eaa0064678a96fe4e 337 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 330 41.837 T 18-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CH53_1308 4cab4ba3ea03bf8eaa0064678a96fe4e 337 Gene3D G3DSA:3.40.190.80 197 334 1.8E-58 T 18-10-2018 CH53_1308 4cab4ba3ea03bf8eaa0064678a96fe4e 337 Gene3D G3DSA:3.30.540.10 1 195 1.8E-71 T 18-10-2018 CH53_1308 4cab4ba3ea03bf8eaa0064678a96fe4e 337 PIRSF PIRSF500210 1 332 1.3E-123 T 18-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CH53_426 d2e964bff5c9a8cb11066765edfd00c0 231 SUPERFAMILY SSF53681 118 229 6.87E-32 T 18-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CH53_426 d2e964bff5c9a8cb11066765edfd00c0 231 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 7.9E-58 T 18-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CH53_426 d2e964bff5c9a8cb11066765edfd00c0 231 Gene3D G3DSA:3.40.50.1860 104 215 1.4E-90 T 18-10-2018 CH53_426 d2e964bff5c9a8cb11066765edfd00c0 231 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 18-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CH53_426 d2e964bff5c9a8cb11066765edfd00c0 231 SUPERFAMILY SSF53681 1 116 4.9E-37 T 18-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CH53_426 d2e964bff5c9a8cb11066765edfd00c0 231 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 9.8E-74 T 18-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 CH53_426 d2e964bff5c9a8cb11066765edfd00c0 231 Gene3D G3DSA:3.40.50.1860 4 223 1.4E-90 T 18-10-2018 CH53_3558 b224b7eb0db06e18e456e96ffd413db0 373 PRINTS PR01010 Flagellar P-ring protein signature 44 59 1.5E-88 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CH53_3558 b224b7eb0db06e18e456e96ffd413db0 373 PRINTS PR01010 Flagellar P-ring protein signature 64 79 1.5E-88 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CH53_3558 b224b7eb0db06e18e456e96ffd413db0 373 PRINTS PR01010 Flagellar P-ring protein signature 29 44 1.5E-88 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CH53_3558 b224b7eb0db06e18e456e96ffd413db0 373 PRINTS PR01010 Flagellar P-ring protein signature 90 109 1.5E-88 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CH53_3558 b224b7eb0db06e18e456e96ffd413db0 373 PRINTS PR01010 Flagellar P-ring protein signature 129 147 1.5E-88 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CH53_3558 b224b7eb0db06e18e456e96ffd413db0 373 PRINTS PR01010 Flagellar P-ring protein signature 259 271 1.5E-88 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CH53_3558 b224b7eb0db06e18e456e96ffd413db0 373 PRINTS PR01010 Flagellar P-ring protein signature 195 213 1.5E-88 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CH53_3558 b224b7eb0db06e18e456e96ffd413db0 373 PRINTS PR01010 Flagellar P-ring protein signature 112 129 1.5E-88 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CH53_3558 b224b7eb0db06e18e456e96ffd413db0 373 PRINTS PR01010 Flagellar P-ring protein signature 169 187 1.5E-88 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CH53_3558 b224b7eb0db06e18e456e96ffd413db0 373 Pfam PF02119 Flagellar P-ring protein 29 372 5.6E-135 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CH53_3558 b224b7eb0db06e18e456e96ffd413db0 373 Hamap MF_00416 Flagellar P-ring protein [flgI]. 9 373 38.475 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CH53_391 4f41ca04c8a7f565bd2a826746800125 400 SUPERFAMILY SSF53067 160 398 1.99E-84 T 18-10-2018 CH53_391 4f41ca04c8a7f565bd2a826746800125 400 Pfam PF00871 Acetokinase family 6 393 1.0E-174 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_391 4f41ca04c8a7f565bd2a826746800125 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 18-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_391 4f41ca04c8a7f565bd2a826746800125 400 PIRSF PIRSF000722 2 400 9.4E-143 T 18-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_391 4f41ca04c8a7f565bd2a826746800125 400 SUPERFAMILY SSF53067 4 199 2.45E-63 T 18-10-2018 CH53_391 4f41ca04c8a7f565bd2a826746800125 400 PRINTS PR00471 Acetate kinase family signature 380 392 1.6E-48 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_391 4f41ca04c8a7f565bd2a826746800125 400 PRINTS PR00471 Acetate kinase family signature 6 17 1.6E-48 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_391 4f41ca04c8a7f565bd2a826746800125 400 PRINTS PR00471 Acetate kinase family signature 325 341 1.6E-48 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_391 4f41ca04c8a7f565bd2a826746800125 400 PRINTS PR00471 Acetate kinase family signature 206 227 1.6E-48 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_391 4f41ca04c8a7f565bd2a826746800125 400 PRINTS PR00471 Acetate kinase family signature 176 189 1.6E-48 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_391 4f41ca04c8a7f565bd2a826746800125 400 PRINTS PR00471 Acetate kinase family signature 302 315 1.6E-48 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_391 4f41ca04c8a7f565bd2a826746800125 400 Gene3D G3DSA:3.30.420.40 199 400 1.9E-86 T 18-10-2018 CH53_391 4f41ca04c8a7f565bd2a826746800125 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 187.627 T 18-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_391 4f41ca04c8a7f565bd2a826746800125 400 Gene3D G3DSA:3.30.420.40 3 198 2.8E-77 T 18-10-2018 CH53_391 4f41ca04c8a7f565bd2a826746800125 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 2.8E-182 T 18-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_391 4f41ca04c8a7f565bd2a826746800125 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 18-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_3001 78d714187fec54178509ef158d129d01 479 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 364 382 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site CH53_3001 78d714187fec54178509ef158d129d01 479 SUPERFAMILY SSF51120 257 470 7.72E-44 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CH53_3001 78d714187fec54178509ef158d129d01 479 Pfam PF08548 Peptidase M10 serralysin C terminal 256 479 3.8E-81 T 18-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 CH53_3001 78d714187fec54178509ef158d129d01 479 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 152 228 8.9E-6 T 18-10-2018 CH53_3001 78d714187fec54178509ef158d129d01 479 Gene3D G3DSA:3.40.390.10 33 260 7.2E-185 T 18-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 CH53_3001 78d714187fec54178509ef158d129d01 479 Gene3D G3DSA:2.150.10.10 261 470 7.2E-185 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CH53_3001 78d714187fec54178509ef158d129d01 479 SUPERFAMILY SSF55486 20 254 6.63E-78 T 18-10-2018 CH53_3001 78d714187fec54178509ef158d129d01 479 PIRSF PIRSF001205 1 479 4.0E-225 T 18-10-2018 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 CH53_3001 78d714187fec54178509ef158d129d01 479 SMART SM00235 71 240 9.2E-27 T 18-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 CH53_3001 78d714187fec54178509ef158d129d01 479 PRINTS PR00313 NodO calcium binding signature 368 376 2.8E-10 T 18-10-2018 CH53_3001 78d714187fec54178509ef158d129d01 479 PRINTS PR00313 NodO calcium binding signature 359 367 2.8E-10 T 18-10-2018 CH53_3001 78d714187fec54178509ef158d129d01 479 PRINTS PR00313 NodO calcium binding signature 338 349 2.8E-10 T 18-10-2018 CH53_3001 78d714187fec54178509ef158d129d01 479 PRINTS PR00313 NodO calcium binding signature 377 386 2.8E-10 T 18-10-2018 CH53_2744 82efaeed0c0640f5923b593a66fce0d2 138 Gene3D G3DSA:3.30.160.20 1 138 2.7E-37 T 18-10-2018 CH53_2744 82efaeed0c0640f5923b593a66fce0d2 138 Pfam PF00472 RF-1 domain 8 129 4.0E-23 T 18-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CH53_2744 82efaeed0c0640f5923b593a66fce0d2 138 SUPERFAMILY SSF75620 7 113 3.73E-14 T 18-10-2018 CH53_2744 82efaeed0c0640f5923b593a66fce0d2 138 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 18-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CH53_2184 431ca86c36d302ae562a9050507d4bd4 70 PRINTS PR00050 Cold shock protein signature 43 61 1.9E-18 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_2184 431ca86c36d302ae562a9050507d4bd4 70 PRINTS PR00050 Cold shock protein signature 28 37 1.9E-18 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_2184 431ca86c36d302ae562a9050507d4bd4 70 PRINTS PR00050 Cold shock protein signature 7 22 1.9E-18 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_2184 431ca86c36d302ae562a9050507d4bd4 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 18-10-2018 IPR019844 Cold-shock conserved site CH53_2184 431ca86c36d302ae562a9050507d4bd4 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 2.2E-33 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_2184 431ca86c36d302ae562a9050507d4bd4 70 PIRSF PIRSF002599 1 70 4.3E-25 T 18-10-2018 IPR012156 Cold shock, CspA GO:0003676 CH53_2184 431ca86c36d302ae562a9050507d4bd4 70 SUPERFAMILY SSF50249 3 69 2.57E-25 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_2184 431ca86c36d302ae562a9050507d4bd4 70 SMART SM00357 6 70 5.9E-32 T 18-10-2018 IPR011129 Cold shock domain GO:0003676 CH53_2184 431ca86c36d302ae562a9050507d4bd4 70 Gene3D G3DSA:2.40.50.140 2 69 4.9E-30 T 18-10-2018 CH53_1177 7b59bc57d957f1fdd9e532a2ffde4944 199 SUPERFAMILY SSF52218 1 192 9.94E-45 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_1177 7b59bc57d957f1fdd9e532a2ffde4944 199 Gene3D G3DSA:3.40.50.360 1 191 3.0E-44 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_1177 7b59bc57d957f1fdd9e532a2ffde4944 199 Pfam PF02525 Flavodoxin-like fold 1 168 2.4E-41 T 18-10-2018 IPR003680 Flavodoxin-like fold CH53_397 079e5857cbc8fe7f47285e29fd164c37 182 Gene3D G3DSA:3.90.79.10 2 178 6.9E-54 T 18-10-2018 CH53_397 079e5857cbc8fe7f47285e29fd164c37 182 Pfam PF00293 NUDIX domain 37 150 5.1E-16 T 18-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CH53_397 079e5857cbc8fe7f47285e29fd164c37 182 PIRSF PIRSF017340 2 171 3.1E-67 T 18-10-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 CH53_397 079e5857cbc8fe7f47285e29fd164c37 182 SUPERFAMILY SSF55811 11 168 3.25E-32 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CH53_3671 498953f4e41b824ee4a6f97f031aba8c 815 Gene3D G3DSA:2.60.40.3110 245 333 4.1E-29 T 18-10-2018 CH53_3671 498953f4e41b824ee4a6f97f031aba8c 815 SUPERFAMILY SSF141729 5 127 4.45E-31 T 18-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 CH53_3671 498953f4e41b824ee4a6f97f031aba8c 815 Pfam PF13954 PapC N-terminal domain 7 152 6.1E-37 T 18-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 CH53_3671 498953f4e41b824ee4a6f97f031aba8c 815 Gene3D G3DSA:3.10.20.410 5 128 1.4E-20 T 18-10-2018 CH53_3671 498953f4e41b824ee4a6f97f031aba8c 815 Pfam PF13953 PapC C-terminal domain 734 790 9.0E-13 T 18-10-2018 IPR025949 PapC-like, C-terminal domain CH53_3671 498953f4e41b824ee4a6f97f031aba8c 815 Gene3D G3DSA:2.60.40.2070 731 808 5.3E-26 T 18-10-2018 CH53_3671 498953f4e41b824ee4a6f97f031aba8c 815 Pfam PF00577 Outer membrane usher protein 171 722 2.7E-172 T 18-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 CH53_3671 498953f4e41b824ee4a6f97f031aba8c 815 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 287 297 - T 18-10-2018 IPR018030 Fimbrial membrane usher, conserved site CH53_3671 498953f4e41b824ee4a6f97f031aba8c 815 Gene3D G3DSA:2.60.40.2610 638 727 2.1E-10 T 18-10-2018 CH53_2625 d56a0f3aa9fded1af45a04f414cdaf32 202 Pfam PF13023 HD domain 23 185 1.6E-47 T 18-10-2018 IPR006674 HD domain CH53_2625 d56a0f3aa9fded1af45a04f414cdaf32 202 SUPERFAMILY SSF109604 14 192 3.14E-41 T 18-10-2018 CH53_2625 d56a0f3aa9fded1af45a04f414cdaf32 202 Gene3D G3DSA:1.10.3210.10 11 202 2.9E-51 T 18-10-2018 CH53_2608 efd3c53d5df0d8ad662c2c5aefcb78ff 293 Pfam PF05552 Conserved TM helix 15 64 8.3E-14 T 18-10-2018 IPR008910 Conserved TM helix CH53_2608 efd3c53d5df0d8ad662c2c5aefcb78ff 293 Gene3D G3DSA:2.30.30.60 129 177 8.3E-21 T 18-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily CH53_2608 efd3c53d5df0d8ad662c2c5aefcb78ff 293 Gene3D G3DSA:3.30.70.100 179 273 1.3E-25 T 18-10-2018 CH53_2608 efd3c53d5df0d8ad662c2c5aefcb78ff 293 SUPERFAMILY SSF50182 114 179 7.85E-17 T 18-10-2018 IPR010920 LSM domain superfamily CH53_2608 efd3c53d5df0d8ad662c2c5aefcb78ff 293 SUPERFAMILY SSF82689 181 279 1.28E-30 T 18-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CH53_2608 efd3c53d5df0d8ad662c2c5aefcb78ff 293 SUPERFAMILY SSF82861 28 112 1.83E-15 T 18-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CH53_2608 efd3c53d5df0d8ad662c2c5aefcb78ff 293 Pfam PF00924 Mechanosensitive ion channel 72 268 3.3E-55 T 18-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CH53_2608 efd3c53d5df0d8ad662c2c5aefcb78ff 293 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 18-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CH53_593 5158af2aca4c836a84e138f71a01a4e8 520 SUPERFAMILY SSF53067 15 135 3.39E-37 T 18-10-2018 CH53_593 5158af2aca4c836a84e138f71a01a4e8 520 PIRSF PIRSF001267 5 508 3.7E-202 T 18-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CH53_593 5158af2aca4c836a84e138f71a01a4e8 520 Pfam PF02541 Ppx/GppA phosphatase family 28 310 4.8E-98 T 18-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CH53_593 5158af2aca4c836a84e138f71a01a4e8 520 Gene3D G3DSA:1.10.3210.10 312 520 8.0E-83 T 18-10-2018 CH53_593 5158af2aca4c836a84e138f71a01a4e8 520 SUPERFAMILY SSF109604 315 507 3.45E-54 T 18-10-2018 CH53_593 5158af2aca4c836a84e138f71a01a4e8 520 SUPERFAMILY SSF53067 139 312 6.39E-48 T 18-10-2018 CH53_593 5158af2aca4c836a84e138f71a01a4e8 520 Gene3D G3DSA:3.30.420.150 119 297 6.0E-98 T 18-10-2018 CH53_593 5158af2aca4c836a84e138f71a01a4e8 520 Gene3D G3DSA:3.30.420.40 16 305 6.0E-98 T 18-10-2018 CH53_593 5158af2aca4c836a84e138f71a01a4e8 520 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 14 308 7.3E-101 T 18-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 CH53_3970 0b4e3504f50f0a64c69f5cee3435900c 81 Pfam PF06649 Protein of unknown function (DUF1161) 23 76 5.7E-27 T 18-10-2018 IPR010595 Protein of unknown function DUF1161 CH53_3970 0b4e3504f50f0a64c69f5cee3435900c 81 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 23 76 1.0E-16 T 18-10-2018 IPR010595 Protein of unknown function DUF1161 CH53_4361 3291f5015487cf97f8c5b2f06f8a383c 285 Gene3D G3DSA:3.40.50.150 1 272 7.7E-78 T 18-10-2018 CH53_4361 3291f5015487cf97f8c5b2f06f8a383c 285 PIRSF PIRSF018249 1 272 1.2E-82 T 18-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 CH53_4361 3291f5015487cf97f8c5b2f06f8a383c 285 SUPERFAMILY SSF53335 4 242 2.86E-43 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_4361 3291f5015487cf97f8c5b2f06f8a383c 285 Pfam PF13847 Methyltransferase domain 87 197 2.9E-11 T 18-10-2018 IPR025714 Methyltransferase domain CH53_620 3c9761e097588a84d8f054237ad311bf 525 Pfam PF00958 GMP synthase C terminal domain 433 524 7.4E-44 T 18-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CH53_620 3c9761e097588a84d8f054237ad311bf 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 5.1E-6 T 18-10-2018 CH53_620 3c9761e097588a84d8f054237ad311bf 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 5.1E-6 T 18-10-2018 CH53_620 3c9761e097588a84d8f054237ad311bf 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 5.1E-6 T 18-10-2018 CH53_620 3c9761e097588a84d8f054237ad311bf 525 Pfam PF02540 NAD synthase 223 257 6.9E-6 T 18-10-2018 IPR022310 NAD/GMP synthase CH53_620 3c9761e097588a84d8f054237ad311bf 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 1.8E-39 T 18-10-2018 IPR017926 Glutamine amidotransferase CH53_620 3c9761e097588a84d8f054237ad311bf 525 Gene3D G3DSA:3.30.300.10 406 525 1.7E-51 T 18-10-2018 CH53_620 3c9761e097588a84d8f054237ad311bf 525 Gene3D G3DSA:3.40.50.880 9 206 6.3E-55 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_620 3c9761e097588a84d8f054237ad311bf 525 SUPERFAMILY SSF52317 4 204 8.54E-56 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_620 3c9761e097588a84d8f054237ad311bf 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 8.9E-8 T 18-10-2018 CH53_620 3c9761e097588a84d8f054237ad311bf 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 8.9E-8 T 18-10-2018 CH53_620 3c9761e097588a84d8f054237ad311bf 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 8.9E-8 T 18-10-2018 CH53_620 3c9761e097588a84d8f054237ad311bf 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 1.3E-153 T 18-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CH53_620 3c9761e097588a84d8f054237ad311bf 525 SUPERFAMILY SSF52402 194 446 7.72E-56 T 18-10-2018 CH53_620 3c9761e097588a84d8f054237ad311bf 525 Gene3D G3DSA:3.40.50.620 209 405 2.4E-72 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_620 3c9761e097588a84d8f054237ad311bf 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 1.1E-6 T 18-10-2018 CH53_620 3c9761e097588a84d8f054237ad311bf 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.1E-6 T 18-10-2018 CH53_620 3c9761e097588a84d8f054237ad311bf 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.1E-6 T 18-10-2018 CH53_620 3c9761e097588a84d8f054237ad311bf 525 SUPERFAMILY SSF54810 405 525 1.7E-51 T 18-10-2018 CH53_620 3c9761e097588a84d8f054237ad311bf 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 5.4E-83 T 18-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CH53_620 3c9761e097588a84d8f054237ad311bf 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 55.871 T 18-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 CH53_1689 2547a40b844b89063deba8f61135408b 489 SUPERFAMILY SSF53383 95 463 9.46E-80 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_1689 2547a40b844b89063deba8f61135408b 489 Pfam PF00155 Aminotransferase class I and II 138 445 3.9E-23 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_1689 2547a40b844b89063deba8f61135408b 489 SMART SM00345 9 68 1.7E-14 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1689 2547a40b844b89063deba8f61135408b 489 Gene3D G3DSA:3.40.640.10 140 358 8.5E-91 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_1689 2547a40b844b89063deba8f61135408b 489 Gene3D G3DSA:1.10.10.10 2 70 3.5E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1689 2547a40b844b89063deba8f61135408b 489 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 3.1E-13 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1689 2547a40b844b89063deba8f61135408b 489 Gene3D G3DSA:3.90.1150.10 92 463 8.5E-91 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_1689 2547a40b844b89063deba8f61135408b 489 SUPERFAMILY SSF46785 5 72 8.17E-18 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1404 3f9ece3cc50c6c60f8064de739c8ad2c 710 Pfam PF00593 TonB dependent receptor 254 708 4.1E-53 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CH53_1404 3f9ece3cc50c6c60f8064de739c8ad2c 710 SUPERFAMILY SSF56935 55 710 1.15E-133 T 18-10-2018 CH53_1404 3f9ece3cc50c6c60f8064de739c8ad2c 710 Gene3D G3DSA:2.40.170.20 178 710 5.5E-118 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH53_1404 3f9ece3cc50c6c60f8064de739c8ad2c 710 Gene3D G3DSA:2.170.130.10 40 177 1.3E-36 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CH53_1404 3f9ece3cc50c6c60f8064de739c8ad2c 710 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 693 710 - T 18-10-2018 IPR010917 TonB-dependent receptor, conserved site CH53_1404 3f9ece3cc50c6c60f8064de739c8ad2c 710 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 710 7.3E-180 T 18-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CH53_1404 3f9ece3cc50c6c60f8064de739c8ad2c 710 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 168 3.4E-23 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain CH53_799 72462f5c7336ea7016ddbb0704a84da0 385 Gene3D G3DSA:3.30.70.260 290 378 4.6E-23 T 18-10-2018 CH53_799 72462f5c7336ea7016ddbb0704a84da0 385 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 324 331 - T 18-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CH53_799 72462f5c7336ea7016ddbb0704a84da0 385 SUPERFAMILY SSF55021 279 376 6.98E-23 T 18-10-2018 CH53_799 72462f5c7336ea7016ddbb0704a84da0 385 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 6 88 7.2E-34 T 18-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 CH53_799 72462f5c7336ea7016ddbb0704a84da0 385 SUPERFAMILY SSF48600 5 91 3.66E-21 T 18-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CH53_799 72462f5c7336ea7016ddbb0704a84da0 385 SUPERFAMILY SSF53850 104 290 2.71E-57 T 18-10-2018 CH53_799 72462f5c7336ea7016ddbb0704a84da0 385 PIRSF PIRSF001500 1 379 1.5E-142 T 18-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CH53_799 72462f5c7336ea7016ddbb0704a84da0 385 Pfam PF00800 Prephenate dehydratase 105 285 3.1E-62 T 18-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CH53_799 72462f5c7336ea7016ddbb0704a84da0 385 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 260 282 - T 18-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CH53_799 72462f5c7336ea7016ddbb0704a84da0 385 Gene3D G3DSA:3.40.190.10 107 280 1.5E-56 T 18-10-2018 CH53_799 72462f5c7336ea7016ddbb0704a84da0 385 Gene3D G3DSA:1.20.59.10 1 106 4.6E-33 T 18-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CH53_799 72462f5c7336ea7016ddbb0704a84da0 385 Pfam PF01817 Chorismate mutase type II 10 88 3.5E-16 T 18-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CH53_799 72462f5c7336ea7016ddbb0704a84da0 385 Gene3D G3DSA:3.40.190.10 188 273 1.5E-56 T 18-10-2018 CH53_799 72462f5c7336ea7016ddbb0704a84da0 385 SMART SM00830 10 90 9.5E-23 T 18-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CH53_3915 dd76b1e9019bb19fc063ed08a7577699 389 SMART SM00028 107 140 95.0 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_3915 dd76b1e9019bb19fc063ed08a7577699 389 SMART SM00028 69 102 64.0 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_3915 dd76b1e9019bb19fc063ed08a7577699 389 SMART SM00028 180 213 51.0 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_3915 dd76b1e9019bb19fc063ed08a7577699 389 SMART SM00028 214 247 1.9 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_3915 dd76b1e9019bb19fc063ed08a7577699 389 Pfam PF13432 Tetratricopeptide repeat 185 243 0.0095 T 18-10-2018 CH53_3915 dd76b1e9019bb19fc063ed08a7577699 389 SUPERFAMILY SSF48452 110 279 9.86E-14 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_3915 dd76b1e9019bb19fc063ed08a7577699 389 Pfam PF13176 Tetratricopeptide repeat 71 97 0.028 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_3915 dd76b1e9019bb19fc063ed08a7577699 389 SUPERFAMILY SSF48452 42 138 1.26E-9 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_3915 dd76b1e9019bb19fc063ed08a7577699 389 Gene3D G3DSA:1.25.40.10 181 353 5.8E-14 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_3915 dd76b1e9019bb19fc063ed08a7577699 389 Gene3D G3DSA:1.25.40.10 39 180 3.5E-15 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_3915 dd76b1e9019bb19fc063ed08a7577699 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.706 T 18-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 CH53_2109 a924a25b68b7f3ffce87e3c4f8392aef 217 Pfam PF07356 Protein of unknown function (DUF1481) 28 213 2.0E-75 T 18-10-2018 IPR010858 Protein of unknown function DUF1481 CH53_666 6422355eeaefc116fa43a312a1daa574 478 SUPERFAMILY SSF55874 324 473 1.96E-32 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_666 6422355eeaefc116fa43a312a1daa574 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 9.6E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_666 6422355eeaefc116fa43a312a1daa574 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 9.6E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_666 6422355eeaefc116fa43a312a1daa574 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 453 9.6E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_666 6422355eeaefc116fa43a312a1daa574 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 474 4.3E-16 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_666 6422355eeaefc116fa43a312a1daa574 478 Gene3D G3DSA:3.30.565.10 324 478 3.0E-32 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_666 6422355eeaefc116fa43a312a1daa574 478 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 316 9.1E-13 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_666 6422355eeaefc116fa43a312a1daa574 478 SMART SM00387 363 475 9.5E-28 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_666 6422355eeaefc116fa43a312a1daa574 478 SMART SM00388 252 320 8.3E-16 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_666 6422355eeaefc116fa43a312a1daa574 478 Gene3D G3DSA:1.10.287.130 196 316 6.3E-17 T 18-10-2018 CH53_666 6422355eeaefc116fa43a312a1daa574 478 SUPERFAMILY SSF47384 235 316 1.35E-15 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_604 dcac4d1c1d629a7b8705c399a4d87e14 112 SUPERFAMILY SSF160113 3 58 3.66E-19 T 18-10-2018 IPR036913 YegP-like superfamily CH53_604 dcac4d1c1d629a7b8705c399a4d87e14 112 Gene3D G3DSA:2.30.29.80 2 112 1.3E-46 T 18-10-2018 CH53_604 dcac4d1c1d629a7b8705c399a4d87e14 112 SUPERFAMILY SSF160113 55 109 3.4E-16 T 18-10-2018 IPR036913 YegP-like superfamily CH53_604 dcac4d1c1d629a7b8705c399a4d87e14 112 Pfam PF07411 Domain of unknown function (DUF1508) 64 109 2.1E-20 T 18-10-2018 IPR010879 Domain of unknown function DUF1508 CH53_604 dcac4d1c1d629a7b8705c399a4d87e14 112 Pfam PF07411 Domain of unknown function (DUF1508) 11 58 1.3E-22 T 18-10-2018 IPR010879 Domain of unknown function DUF1508 CH53_309 503e8a0154e0eec0af506ade62282e77 286 SUPERFAMILY SSF54211 2 150 3.57E-22 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_309 503e8a0154e0eec0af506ade62282e77 286 Pfam PF00288 GHMP kinases N terminal domain 73 120 2.1E-8 T 18-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CH53_309 503e8a0154e0eec0af506ade62282e77 286 PIRSF PIRSF033887 1 280 9.6E-64 T 18-10-2018 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443 CH53_309 503e8a0154e0eec0af506ade62282e77 286 Gene3D G3DSA:3.30.230.10 2 142 6.1E-15 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH53_1933 e493abb5ec6cc6b99f574a90a1bfbbbd 623 Gene3D G3DSA:2.40.170.20 156 623 2.1E-155 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH53_1933 e493abb5ec6cc6b99f574a90a1bfbbbd 623 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 606 623 - T 18-10-2018 IPR010917 TonB-dependent receptor, conserved site CH53_1933 e493abb5ec6cc6b99f574a90a1bfbbbd 623 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 3 623 35.79 T 18-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 CH53_1933 e493abb5ec6cc6b99f574a90a1bfbbbd 623 Gene3D G3DSA:2.170.130.10 25 155 8.1E-39 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CH53_1933 e493abb5ec6cc6b99f574a90a1bfbbbd 623 Pfam PF00593 TonB dependent receptor 185 622 9.9E-42 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CH53_1933 e493abb5ec6cc6b99f574a90a1bfbbbd 623 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 150 2.1E-30 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain CH53_1933 e493abb5ec6cc6b99f574a90a1bfbbbd 623 SUPERFAMILY SSF56935 30 623 3.36E-121 T 18-10-2018 CH53_1933 e493abb5ec6cc6b99f574a90a1bfbbbd 623 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 3 623 1.6E-227 T 18-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 CH53_2329 f4be38849b49b38e0beb74535d8acb71 216 SMART SM01207 10 185 2.9E-84 T 18-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CH53_2329 f4be38849b49b38e0beb74535d8acb71 216 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 1.7E-81 T 18-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CH53_2329 f4be38849b49b38e0beb74535d8acb71 216 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 5.8E-51 T 18-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CH53_2329 f4be38849b49b38e0beb74535d8acb71 216 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.689 T 18-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CH53_851 55d0efdb99f3b639e020ab6ca06a86fe 504 Gene3D G3DSA:3.40.50.300 251 503 2.4E-46 T 18-10-2018 CH53_851 55d0efdb99f3b639e020ab6ca06a86fe 504 Pfam PF00005 ABC transporter 280 434 8.1E-24 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_851 55d0efdb99f3b639e020ab6ca06a86fe 504 Pfam PF00005 ABC transporter 29 180 1.4E-27 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_851 55d0efdb99f3b639e020ab6ca06a86fe 504 SUPERFAMILY SSF52540 12 238 2.66E-56 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_851 55d0efdb99f3b639e020ab6ca06a86fe 504 Gene3D G3DSA:3.40.50.300 9 246 3.7E-57 T 18-10-2018 CH53_851 55d0efdb99f3b639e020ab6ca06a86fe 504 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_851 55d0efdb99f3b639e020ab6ca06a86fe 504 SMART SM00382 38 228 6.5E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_851 55d0efdb99f3b639e020ab6ca06a86fe 504 SMART SM00382 288 483 0.004 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_851 55d0efdb99f3b639e020ab6ca06a86fe 504 SUPERFAMILY SSF52540 271 495 4.49E-45 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2613 1d59be86c262e30e251f989dffd87ac4 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 8.8E-52 T 18-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CH53_2613 1d59be86c262e30e251f989dffd87ac4 413 Gene3D G3DSA:3.40.50.720 109 297 2.6E-110 T 18-10-2018 CH53_2613 1d59be86c262e30e251f989dffd87ac4 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 18-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CH53_2613 1d59be86c262e30e251f989dffd87ac4 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 2.1E-37 T 18-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CH53_2613 1d59be86c262e30e251f989dffd87ac4 413 Gene3D G3DSA:3.30.70.260 328 412 1.3E-32 T 18-10-2018 CH53_2613 1d59be86c262e30e251f989dffd87ac4 413 SUPERFAMILY SSF52283 7 135 1.83E-48 T 18-10-2018 CH53_2613 1d59be86c262e30e251f989dffd87ac4 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 18-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CH53_2613 1d59be86c262e30e251f989dffd87ac4 413 SUPERFAMILY SSF51735 108 295 1.89E-57 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2613 1d59be86c262e30e251f989dffd87ac4 413 Gene3D G3DSA:3.40.50.720 14 312 2.6E-110 T 18-10-2018 CH53_2613 1d59be86c262e30e251f989dffd87ac4 413 SUPERFAMILY SSF55021 338 412 8.02E-19 T 18-10-2018 CH53_2613 1d59be86c262e30e251f989dffd87ac4 413 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 18-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CH53_1291 fd29a7cd5bc66afe5e71397cc2db3e6d 482 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 52 452 5.4E-167 T 18-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_1291 fd29a7cd5bc66afe5e71397cc2db3e6d 482 Gene3D G3DSA:3.40.710.10 26 90 3.1E-6 T 18-10-2018 CH53_1291 fd29a7cd5bc66afe5e71397cc2db3e6d 482 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 26 473 2.2E-163 T 18-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_1291 fd29a7cd5bc66afe5e71397cc2db3e6d 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 291 313 1.9E-38 T 18-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_1291 fd29a7cd5bc66afe5e71397cc2db3e6d 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 350 364 1.9E-38 T 18-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_1291 fd29a7cd5bc66afe5e71397cc2db3e6d 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 429 442 1.9E-38 T 18-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_1291 fd29a7cd5bc66afe5e71397cc2db3e6d 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 365 379 1.9E-38 T 18-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_1291 fd29a7cd5bc66afe5e71397cc2db3e6d 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 63 82 1.9E-38 T 18-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_1291 fd29a7cd5bc66afe5e71397cc2db3e6d 482 Gene3D G3DSA:3.50.80.20 91 186 2.4E-22 T 18-10-2018 CH53_1291 fd29a7cd5bc66afe5e71397cc2db3e6d 482 Gene3D G3DSA:3.40.710.10 248 482 7.5E-68 T 18-10-2018 CH53_1291 fd29a7cd5bc66afe5e71397cc2db3e6d 482 SUPERFAMILY SSF56601 28 479 6.14E-104 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CH53_552 1f20a48f6323a47c9836d8540c564744 191 Pfam PF00293 NUDIX domain 45 169 4.6E-13 T 18-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CH53_552 1f20a48f6323a47c9836d8540c564744 191 SUPERFAMILY SSF55811 11 188 6.23E-51 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CH53_552 1f20a48f6323a47c9836d8540c564744 191 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 9 185 1.2E-54 T 18-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CH53_552 1f20a48f6323a47c9836d8540c564744 191 Gene3D G3DSA:3.90.79.10 1 190 5.5E-58 T 18-10-2018 CH53_2406 dc3d4306b0df0e86e05c444ce43e4291 342 Pfam PF13247 4Fe-4S dicluster domain 111 212 9.9E-23 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_2406 dc3d4306b0df0e86e05c444ce43e4291 342 SUPERFAMILY SSF54862 37 330 5.69E-68 T 18-10-2018 CH53_2406 dc3d4306b0df0e86e05c444ce43e4291 342 Gene3D G3DSA:3.30.70.20 34 181 1.5E-48 T 18-10-2018 CH53_2406 dc3d4306b0df0e86e05c444ce43e4291 342 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 150 161 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_2406 dc3d4306b0df0e86e05c444ce43e4291 342 Gene3D G3DSA:3.30.70.20 35 267 1.5E-48 T 18-10-2018 CH53_2482 7dd6abb494a85f756b11a5b1b12453f1 269 Pfam PF00106 short chain dehydrogenase 8 190 3.4E-41 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2482 7dd6abb494a85f756b11a5b1b12453f1 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.9E-16 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2482 7dd6abb494a85f756b11a5b1b12453f1 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.9E-16 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2482 7dd6abb494a85f756b11a5b1b12453f1 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.9E-16 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2482 7dd6abb494a85f756b11a5b1b12453f1 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.9E-16 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2482 7dd6abb494a85f756b11a5b1b12453f1 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.9E-11 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2482 7dd6abb494a85f756b11a5b1b12453f1 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.9E-11 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2482 7dd6abb494a85f756b11a5b1b12453f1 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.9E-11 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2482 7dd6abb494a85f756b11a5b1b12453f1 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CH53_2482 7dd6abb494a85f756b11a5b1b12453f1 269 Gene3D G3DSA:3.40.50.720 1 259 2.8E-54 T 18-10-2018 CH53_2482 7dd6abb494a85f756b11a5b1b12453f1 269 SUPERFAMILY SSF51735 1 258 4.05E-56 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3906 0af8d75bce7b492d59779b4f29ea3782 348 Gene3D G3DSA:3.90.226.10 104 300 1.2E-42 T 18-10-2018 CH53_3906 0af8d75bce7b492d59779b4f29ea3782 348 Pfam PF01343 Peptidase family S49 161 304 3.9E-45 T 18-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CH53_3906 0af8d75bce7b492d59779b4f29ea3782 348 SUPERFAMILY SSF52096 96 298 1.41E-30 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CH53_3906 0af8d75bce7b492d59779b4f29ea3782 348 Gene3D G3DSA:3.40.1750.20 201 265 1.2E-42 T 18-10-2018 CH53_3906 0af8d75bce7b492d59779b4f29ea3782 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 9.4E-59 T 18-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 CH53_3968 8e50e3499818e0e407de9706472c8b6e 222 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 214 24.164 T 18-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CH53_3968 8e50e3499818e0e407de9706472c8b6e 222 SUPERFAMILY SSF52540 1 207 1.8E-54 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3968 8e50e3499818e0e407de9706472c8b6e 222 Gene3D G3DSA:3.40.50.300 3 220 3.0E-53 T 18-10-2018 CH53_3968 8e50e3499818e0e407de9706472c8b6e 222 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 7.7E-43 T 18-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CH53_3968 8e50e3499818e0e407de9706472c8b6e 222 PIRSF PIRSF006755 1 220 4.0E-67 T 18-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CH53_3968 8e50e3499818e0e407de9706472c8b6e 222 Pfam PF13500 AAA domain 4 205 3.9E-29 T 18-10-2018 CH53_3302 28b73475db77fd6758fc89622edd40ea 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 1.0E-43 T 18-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 CH53_3302 28b73475db77fd6758fc89622edd40ea 213 Gene3D G3DSA:3.40.50.300 4 213 2.7E-61 T 18-10-2018 CH53_3302 28b73475db77fd6758fc89622edd40ea 213 PRINTS PR00988 Uridine kinase signature 157 168 4.1E-38 T 18-10-2018 CH53_3302 28b73475db77fd6758fc89622edd40ea 213 PRINTS PR00988 Uridine kinase signature 8 25 4.1E-38 T 18-10-2018 CH53_3302 28b73475db77fd6758fc89622edd40ea 213 PRINTS PR00988 Uridine kinase signature 87 102 4.1E-38 T 18-10-2018 CH53_3302 28b73475db77fd6758fc89622edd40ea 213 PRINTS PR00988 Uridine kinase signature 143 153 4.1E-38 T 18-10-2018 CH53_3302 28b73475db77fd6758fc89622edd40ea 213 PRINTS PR00988 Uridine kinase signature 179 192 4.1E-38 T 18-10-2018 CH53_3302 28b73475db77fd6758fc89622edd40ea 213 PRINTS PR00988 Uridine kinase signature 42 53 4.1E-38 T 18-10-2018 CH53_3302 28b73475db77fd6758fc89622edd40ea 213 TIGRFAM TIGR00235 udk: uridine kinase 6 213 1.2E-95 T 18-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 CH53_3302 28b73475db77fd6758fc89622edd40ea 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 41.199 T 18-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 CH53_3302 28b73475db77fd6758fc89622edd40ea 213 SUPERFAMILY SSF52540 8 205 1.63E-50 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_183 66796c235c014e3233e7af3657e0b30d 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 3.6E-246 T 18-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CH53_183 66796c235c014e3233e7af3657e0b30d 550 Gene3D G3DSA:1.20.1270.20 149 232 1.4E-27 T 18-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CH53_183 66796c235c014e3233e7af3657e0b30d 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 544 9.5E-159 T 18-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CH53_183 66796c235c014e3233e7af3657e0b30d 550 SUPERFAMILY SSF56821 1 549 4.12E-188 T 18-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 CH53_183 66796c235c014e3233e7af3657e0b30d 550 Gene3D G3DSA:3.40.50.2030 380 548 7.4E-59 T 18-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CH53_183 66796c235c014e3233e7af3657e0b30d 550 Gene3D G3DSA:1.20.1270.20 1 137 5.9E-35 T 18-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CH53_183 66796c235c014e3233e7af3657e0b30d 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 20.77 T 18-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CH53_183 66796c235c014e3233e7af3657e0b30d 550 PIRSF PIRSF000076 1 550 1.5E-240 T 18-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CH53_183 66796c235c014e3233e7af3657e0b30d 550 Gene3D G3DSA:3.40.50.2030 234 379 3.2E-60 T 18-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CH53_3288 1dbb869ecd298ac5b6f50cf23840f866 115 PIRSF PIRSF004761 1 115 2.8E-31 T 18-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 CH53_3288 1dbb869ecd298ac5b6f50cf23840f866 115 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 18-10-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CH53_3288 1dbb869ecd298ac5b6f50cf23840f866 115 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 115 19.255 T 18-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 CH53_3288 1dbb869ecd298ac5b6f50cf23840f866 115 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 113 1.5E-27 T 18-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 CH53_3288 1dbb869ecd298ac5b6f50cf23840f866 115 Gene3D G3DSA:3.30.2320.80 1 115 1.4E-24 T 18-10-2018 CH53_3288 1dbb869ecd298ac5b6f50cf23840f866 115 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 115 2.6E-34 T 18-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 CH53_1398 e1e1bd0dac0f9468e75b70f5fae32bba 279 Gene3D G3DSA:3.40.50.1980 147 279 1.3E-51 T 18-10-2018 CH53_1398 e1e1bd0dac0f9468e75b70f5fae32bba 279 Pfam PF01497 Periplasmic binding protein 29 253 2.5E-28 T 18-10-2018 IPR002491 ABC transporter periplasmic binding domain CH53_1398 e1e1bd0dac0f9468e75b70f5fae32bba 279 SUPERFAMILY SSF53807 26 273 7.46E-49 T 18-10-2018 CH53_1398 e1e1bd0dac0f9468e75b70f5fae32bba 279 Gene3D G3DSA:3.40.50.1980 25 146 4.3E-42 T 18-10-2018 CH53_1362 00feac3039874003ea7487e42fda56e3 335 Pfam PF04055 Radical SAM superfamily 110 255 3.0E-8 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_1362 00feac3039874003ea7487e42fda56e3 335 Gene3D G3DSA:3.20.20.70 43 326 3.4E-89 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_1362 00feac3039874003ea7487e42fda56e3 335 Pfam PF13353 4Fe-4S single cluster domain 104 175 1.4E-6 T 18-10-2018 CH53_1362 00feac3039874003ea7487e42fda56e3 335 SUPERFAMILY SSF102114 94 316 4.58E-26 T 18-10-2018 CH53_1362 00feac3039874003ea7487e42fda56e3 335 PIRSF PIRSF004911 2 335 7.8E-118 T 18-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CH53_1362 00feac3039874003ea7487e42fda56e3 335 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 7 327 4.3E-159 T 18-10-2018 IPR022462 Lysine-2,3-aminomutase-like CH53_1362 00feac3039874003ea7487e42fda56e3 335 TIGRFAM TIGR00238 TIGR00238: KamA family protein 5 320 1.7E-132 T 18-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CH53_3096 0f96382333137bf0677a015b5e8b2472 381 Pfam PF01979 Amidohydrolase family 50 379 3.1E-40 T 18-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CH53_3096 0f96382333137bf0677a015b5e8b2472 381 Gene3D G3DSA:2.30.40.10 7 376 1.1E-135 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_3096 0f96382333137bf0677a015b5e8b2472 381 PIRSF PIRSF038994 1 381 1.5E-114 T 18-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CH53_3096 0f96382333137bf0677a015b5e8b2472 381 Gene3D G3DSA:3.20.20.140 55 344 1.1E-135 T 18-10-2018 CH53_3096 0f96382333137bf0677a015b5e8b2472 381 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 7.6E-163 T 18-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CH53_3096 0f96382333137bf0677a015b5e8b2472 381 SUPERFAMILY SSF51338 1 53 1.03E-19 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_3096 0f96382333137bf0677a015b5e8b2472 381 SUPERFAMILY SSF51556 54 350 1.05E-98 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_889 9c0969283020d83f85c0c047d3cf4aa3 643 SUPERFAMILY SSF52540 1 225 1.08E-65 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_889 9c0969283020d83f85c0c047d3cf4aa3 643 Pfam PF02687 FtsX-like permease family 549 636 5.8E-10 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CH53_889 9c0969283020d83f85c0c047d3cf4aa3 643 Gene3D G3DSA:3.40.50.300 1 250 9.9E-65 T 18-10-2018 CH53_889 9c0969283020d83f85c0c047d3cf4aa3 643 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_889 9c0969283020d83f85c0c047d3cf4aa3 643 Pfam PF00005 ABC transporter 21 169 1.6E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_889 9c0969283020d83f85c0c047d3cf4aa3 643 SMART SM00382 30 217 1.8E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_889 9c0969283020d83f85c0c047d3cf4aa3 643 Pfam PF12704 MacB-like periplasmic core domain 270 486 4.5E-34 T 18-10-2018 IPR025857 MacB-like periplasmic core domain CH53_2161 dd1d08b6e4abf2257e1fd5b8ef6ebdc7 943 Gene3D G3DSA:3.40.50.300 617 936 4.3E-138 T 18-10-2018 CH53_2161 dd1d08b6e4abf2257e1fd5b8ef6ebdc7 943 Gene3D G3DSA:1.10.8.280 287 403 3.1E-244 T 18-10-2018 CH53_2161 dd1d08b6e4abf2257e1fd5b8ef6ebdc7 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 18-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 CH53_2161 dd1d08b6e4abf2257e1fd5b8ef6ebdc7 943 Gene3D G3DSA:3.30.190.20 130 244 3.1E-244 T 18-10-2018 CH53_2161 dd1d08b6e4abf2257e1fd5b8ef6ebdc7 943 Gene3D G3DSA:1.20.1580.10 90 492 3.1E-244 T 18-10-2018 CH53_2161 dd1d08b6e4abf2257e1fd5b8ef6ebdc7 943 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2161 dd1d08b6e4abf2257e1fd5b8ef6ebdc7 943 Gene3D G3DSA:3.40.50.300 6 595 3.1E-244 T 18-10-2018 CH53_2161 dd1d08b6e4abf2257e1fd5b8ef6ebdc7 943 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2161 dd1d08b6e4abf2257e1fd5b8ef6ebdc7 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.903 T 18-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 CH53_2161 dd1d08b6e4abf2257e1fd5b8ef6ebdc7 943 SUPERFAMILY SSF52540 615 911 3.68E-52 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2161 dd1d08b6e4abf2257e1fd5b8ef6ebdc7 943 SUPERFAMILY SSF52540 1 569 7.17E-44 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2161 dd1d08b6e4abf2257e1fd5b8ef6ebdc7 943 Gene3D G3DSA:1.20.1580.10 692 830 4.3E-138 T 18-10-2018 CH53_3389 298816b205cb11ebcca02b51d7214be4 181 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 2 180 2.6E-60 T 18-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 CH53_3389 298816b205cb11ebcca02b51d7214be4 181 PIRSF PIRSF006135 1 181 6.7E-56 T 18-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 CH53_3389 298816b205cb11ebcca02b51d7214be4 181 Gene3D G3DSA:3.40.50.300 1 181 6.4E-64 T 18-10-2018 CH53_3389 298816b205cb11ebcca02b51d7214be4 181 SUPERFAMILY SSF52540 1 181 2.19E-52 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2961 0af73d6ea77909e4779315ee2e111ca3 403 SUPERFAMILY SSF103473 9 389 7.46E-55 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_2961 0af73d6ea77909e4779315ee2e111ca3 403 Pfam PF07690 Major Facilitator Superfamily 25 350 4.4E-35 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_2961 0af73d6ea77909e4779315ee2e111ca3 403 Gene3D G3DSA:1.20.1250.20 13 390 1.7E-42 T 18-10-2018 CH53_1910 78e9fa56b863dc536500620c851ea8e3 878 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 133 144 - T 18-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CH53_1910 78e9fa56b863dc536500620c851ea8e3 878 Gene3D G3DSA:1.20.1440.90 303 388 9.6E-24 T 18-10-2018 CH53_1910 78e9fa56b863dc536500620c851ea8e3 878 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 536 548 - T 18-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CH53_1910 78e9fa56b863dc536500620c851ea8e3 878 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 878 18.25 T 18-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CH53_1910 78e9fa56b863dc536500620c851ea8e3 878 SUPERFAMILY SSF51621 6 878 0.0 T 18-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CH53_1910 78e9fa56b863dc536500620c851ea8e3 878 Pfam PF00311 Phosphoenolpyruvate carboxylase 128 878 1.9E-289 T 18-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CH53_1910 78e9fa56b863dc536500620c851ea8e3 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 244 259 4.9E-68 T 18-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CH53_1910 78e9fa56b863dc536500620c851ea8e3 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 534 554 4.9E-68 T 18-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CH53_1910 78e9fa56b863dc536500620c851ea8e3 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 385 405 4.9E-68 T 18-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CH53_1910 78e9fa56b863dc536500620c851ea8e3 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 132 145 4.9E-68 T 18-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CH53_1910 78e9fa56b863dc536500620c851ea8e3 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 185 201 4.9E-68 T 18-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CH53_1910 78e9fa56b863dc536500620c851ea8e3 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 708 734 4.9E-68 T 18-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CH53_1910 78e9fa56b863dc536500620c851ea8e3 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 576 605 4.9E-68 T 18-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CH53_1370 832d03e525d9e2d4559e21bb07594ec7 583 SUPERFAMILY SSF52833 467 579 7.31E-24 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_1370 832d03e525d9e2d4559e21bb07594ec7 583 ProSitePatterns PS00194 Thioredoxin family active site. 489 507 - T 18-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CH53_1370 832d03e525d9e2d4559e21bb07594ec7 583 Pfam PF13899 Thioredoxin-like 479 554 1.1E-12 T 18-10-2018 CH53_1370 832d03e525d9e2d4559e21bb07594ec7 583 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 581 40.064 T 18-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 CH53_1370 832d03e525d9e2d4559e21bb07594ec7 583 Pfam PF11412 Disulphide bond corrector protein DsbC 39 150 2.7E-33 T 18-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CH53_1370 832d03e525d9e2d4559e21bb07594ec7 583 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 188 393 1.5E-20 T 18-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CH53_1370 832d03e525d9e2d4559e21bb07594ec7 583 SUPERFAMILY SSF74863 38 153 6.8E-40 T 18-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CH53_1370 832d03e525d9e2d4559e21bb07594ec7 583 Gene3D G3DSA:2.60.40.1250 31 167 8.7E-44 T 18-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CH53_1370 832d03e525d9e2d4559e21bb07594ec7 583 Gene3D G3DSA:3.40.30.10 456 581 1.5E-35 T 18-10-2018 CH53_3576 128f25ceb896f30c06b56bb615690fa8 408 Gene3D G3DSA:1.10.150.130 58 181 2.0E-12 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal CH53_3576 128f25ceb896f30c06b56bb615690fa8 408 Pfam PF12167 Arm DNA-binding domain 1 48 1.9E-18 T 18-10-2018 IPR022000 Min27-like integrase, DNA-binding domain CH53_3576 128f25ceb896f30c06b56bb615690fa8 408 Pfam PF00589 Phage integrase family 183 376 1.1E-21 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CH53_3576 128f25ceb896f30c06b56bb615690fa8 408 Gene3D G3DSA:1.10.443.10 184 393 3.7E-39 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CH53_3576 128f25ceb896f30c06b56bb615690fa8 408 SUPERFAMILY SSF56349 62 383 1.09E-51 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CH53_3119 5d30e00ca1114bbd88b29158fe5f56af 546 SUPERFAMILY SSF53738 209 317 2.47E-8 T 18-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3119 5d30e00ca1114bbd88b29158fe5f56af 546 Gene3D G3DSA:3.30.310.50 443 545 1.8E-35 T 18-10-2018 CH53_3119 5d30e00ca1114bbd88b29158fe5f56af 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 1.4E-17 T 18-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3119 5d30e00ca1114bbd88b29158fe5f56af 546 SUPERFAMILY SSF53738 26 235 4.24E-51 T 18-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3119 5d30e00ca1114bbd88b29158fe5f56af 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 543 0.0 T 18-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 CH53_3119 5d30e00ca1114bbd88b29158fe5f56af 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 18-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3119 5d30e00ca1114bbd88b29158fe5f56af 546 Gene3D G3DSA:3.40.120.10 12 218 1.6E-75 T 18-10-2018 CH53_3119 5d30e00ca1114bbd88b29158fe5f56af 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 489 539 2.7E-8 T 18-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3119 5d30e00ca1114bbd88b29158fe5f56af 546 Gene3D G3DSA:3.40.120.10 318 442 1.7E-35 T 18-10-2018 CH53_3119 5d30e00ca1114bbd88b29158fe5f56af 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 439 2.1E-29 T 18-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3119 5d30e00ca1114bbd88b29158fe5f56af 546 Gene3D G3DSA:3.40.120.10 223 317 3.3E-45 T 18-10-2018 CH53_3119 5d30e00ca1114bbd88b29158fe5f56af 546 SUPERFAMILY SSF53738 305 446 1.41E-31 T 18-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3119 5d30e00ca1114bbd88b29158fe5f56af 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 1.2E-36 T 18-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3119 5d30e00ca1114bbd88b29158fe5f56af 546 SUPERFAMILY SSF55957 432 543 1.33E-20 T 18-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CH53_3764 f6536eacc9da0a4db952a2d936b170a9 360 SUPERFAMILY SSF75620 12 353 2.88E-135 T 18-10-2018 CH53_3764 f6536eacc9da0a4db952a2d936b170a9 360 Gene3D G3DSA:3.30.160.20 210 297 1.8E-93 T 18-10-2018 CH53_3764 f6536eacc9da0a4db952a2d936b170a9 360 Gene3D G3DSA:1.20.58.410 2 101 2.1E-5 T 18-10-2018 CH53_3764 f6536eacc9da0a4db952a2d936b170a9 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 6.7E-172 T 18-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CH53_3764 f6536eacc9da0a4db952a2d936b170a9 360 SMART SM00937 63 178 6.7E-70 T 18-10-2018 IPR005139 Peptide chain release factor GO:0006415 CH53_3764 f6536eacc9da0a4db952a2d936b170a9 360 Pfam PF00472 RF-1 domain 216 321 7.6E-40 T 18-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CH53_3764 f6536eacc9da0a4db952a2d936b170a9 360 Gene3D G3DSA:3.30.70.1660 111 342 1.8E-93 T 18-10-2018 CH53_3764 f6536eacc9da0a4db952a2d936b170a9 360 Pfam PF03462 PCRF domain 12 203 7.9E-75 T 18-10-2018 IPR005139 Peptide chain release factor GO:0006415 CH53_3764 f6536eacc9da0a4db952a2d936b170a9 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 18-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CH53_3764 f6536eacc9da0a4db952a2d936b170a9 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.961 T 18-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CH53_3510 ddeaed97b1bea87d6e999786ff90063c 178 SUPERFAMILY SSF49401 35 178 5.97E-26 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_3510 ddeaed97b1bea87d6e999786ff90063c 178 Gene3D G3DSA:2.60.40.1090 28 177 4.8E-34 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_3510 ddeaed97b1bea87d6e999786ff90063c 178 Pfam PF16970 Type-1 fimbrial protein, A 55 178 4.7E-16 T 18-10-2018 IPR039458 Type-1 fimbrial protein, A CH53_1499 ed4eb4cf2a2d277cbeb0c9ad55262501 240 Pfam PF08348 YheO-like PAS domain 29 137 5.0E-36 T 18-10-2018 IPR013559 YheO-like CH53_1499 ed4eb4cf2a2d277cbeb0c9ad55262501 240 Pfam PF13309 HTH domain 171 228 3.2E-19 T 18-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain CH53_1499 ed4eb4cf2a2d277cbeb0c9ad55262501 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 153 2.0E-62 T 18-10-2018 IPR013559 YheO-like CH53_1770 a9cce7d7037e16779cdf890fcf49d618 287 Gene3D G3DSA:1.10.287.80 6 283 5.0E-112 T 18-10-2018 CH53_1770 a9cce7d7037e16779cdf890fcf49d618 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 2.4E-111 T 18-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1770 a9cce7d7037e16779cdf890fcf49d618 287 SUPERFAMILY SSF52943 2 287 2.62E-96 T 18-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1770 a9cce7d7037e16779cdf890fcf49d618 287 Gene3D G3DSA:3.40.1380.10 61 206 5.0E-112 T 18-10-2018 CH53_1770 a9cce7d7037e16779cdf890fcf49d618 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.354 T 18-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1770 a9cce7d7037e16779cdf890fcf49d618 287 Pfam PF00231 ATP synthase 5 286 9.1E-96 T 18-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1770 a9cce7d7037e16779cdf890fcf49d618 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 18-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1770 a9cce7d7037e16779cdf890fcf49d618 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 3.4E-38 T 18-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1770 a9cce7d7037e16779cdf890fcf49d618 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 3.4E-38 T 18-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1770 a9cce7d7037e16779cdf890fcf49d618 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 3.4E-38 T 18-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1770 a9cce7d7037e16779cdf890fcf49d618 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 3.4E-38 T 18-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_2732 e7656282e467d1195828040a06b4408a 262 PIRSF PIRSF000456 4 262 6.7E-107 T 18-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CH53_2732 e7656282e467d1195828040a06b4408a 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.9E-108 T 18-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CH53_2732 e7656282e467d1195828040a06b4408a 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 47.901 T 18-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CH53_2732 e7656282e467d1195828040a06b4408a 262 SUPERFAMILY SSF51161 2 262 4.72E-77 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily CH53_2732 e7656282e467d1195828040a06b4408a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 9.4E-7 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_2732 e7656282e467d1195828040a06b4408a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 8.0E-10 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_2732 e7656282e467d1195828040a06b4408a 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 18-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CH53_2732 e7656282e467d1195828040a06b4408a 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 7.3E-29 T 18-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 CH53_2732 e7656282e467d1195828040a06b4408a 262 Gene3D G3DSA:1.20.1180.10 197 262 2.6E-27 T 18-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 CH53_2732 e7656282e467d1195828040a06b4408a 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 18-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CH53_2732 e7656282e467d1195828040a06b4408a 262 Gene3D G3DSA:2.160.10.10 1 196 6.1E-52 T 18-10-2018 CH53_1859 fbbf586ef666696b4990ee4251ee5023 55 Pfam PF00471 Ribosomal protein L33 7 53 8.8E-19 T 18-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1859 fbbf586ef666696b4990ee4251ee5023 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 18-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1859 fbbf586ef666696b4990ee4251ee5023 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.908 T 18-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1859 fbbf586ef666696b4990ee4251ee5023 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 8.4E-28 T 18-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1859 fbbf586ef666696b4990ee4251ee5023 55 SUPERFAMILY SSF57829 1 53 3.72E-20 T 18-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CH53_1859 fbbf586ef666696b4990ee4251ee5023 55 Gene3D G3DSA:2.20.28.120 1 55 2.8E-31 T 18-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_4419 8d220921b693d957be6538ac9a2f3a28 338 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 8 288 1.5E-95 T 18-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CH53_4419 8d220921b693d957be6538ac9a2f3a28 338 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 230 247 - T 18-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CH53_4419 8d220921b693d957be6538ac9a2f3a28 338 Gene3D G3DSA:3.20.20.300 1 338 2.2E-131 T 18-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 CH53_4419 8d220921b693d957be6538ac9a2f3a28 338 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 328 47.317 T 18-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 CH53_4419 8d220921b693d957be6538ac9a2f3a28 338 SUPERFAMILY SSF51445 1 293 2.32E-84 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_4 4e7831a08e0fcf5d8cb729835df9bfdd 413 SUPERFAMILY SSF53901 215 412 1.5E-74 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_4 4e7831a08e0fcf5d8cb729835df9bfdd 413 Gene3D G3DSA:3.40.47.10 1 255 7.5E-88 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_4 4e7831a08e0fcf5d8cb729835df9bfdd 413 PIRSF PIRSF000447 1 413 8.6E-202 T 18-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CH53_4 4e7831a08e0fcf5d8cb729835df9bfdd 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 1.5E-40 T 18-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CH53_4 4e7831a08e0fcf5d8cb729835df9bfdd 413 SMART SM00825 Beta-ketoacyl synthase 6 413 1.5E-14 T 18-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH53_4 4e7831a08e0fcf5d8cb729835df9bfdd 413 Gene3D G3DSA:3.40.47.10 261 413 1.4E-58 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_4 4e7831a08e0fcf5d8cb729835df9bfdd 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 18-10-2018 IPR018201 Beta-ketoacyl synthase, active site CH53_4 4e7831a08e0fcf5d8cb729835df9bfdd 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 6.0E-197 T 18-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CH53_4 4e7831a08e0fcf5d8cb729835df9bfdd 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 6.4E-60 T 18-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CH53_4 4e7831a08e0fcf5d8cb729835df9bfdd 413 SUPERFAMILY SSF53901 4 252 2.17E-76 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_1498 b378a5cc94a7b3a062b8e5fbce41ed99 123 Pfam PF02635 DsrE/DsrF-like family 2 123 8.9E-26 T 18-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein CH53_1498 b378a5cc94a7b3a062b8e5fbce41ed99 123 Gene3D G3DSA:3.40.1260.10 1 123 4.2E-54 T 18-10-2018 IPR027396 DsrEFH-like CH53_1498 b378a5cc94a7b3a062b8e5fbce41ed99 123 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 1 123 1.2E-52 T 18-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 CH53_1498 b378a5cc94a7b3a062b8e5fbce41ed99 123 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 1 123 37.126 T 18-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 CH53_1498 b378a5cc94a7b3a062b8e5fbce41ed99 123 SUPERFAMILY SSF75169 2 123 1.82E-34 T 18-10-2018 IPR027396 DsrEFH-like CH53_2600 6d9d7487919a3441792777b387a6d18b 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 18-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CH53_2600 6d9d7487919a3441792777b387a6d18b 384 SUPERFAMILY SSF55973 111 232 5.89E-52 T 18-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CH53_2600 6d9d7487919a3441792777b387a6d18b 384 PIRSF PIRSF000497 1 382 6.5E-175 T 18-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CH53_2600 6d9d7487919a3441792777b387a6d18b 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 18-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CH53_2600 6d9d7487919a3441792777b387a6d18b 384 Gene3D G3DSA:3.30.300.10 5 233 1.7E-180 T 18-10-2018 CH53_2600 6d9d7487919a3441792777b387a6d18b 384 Gene3D G3DSA:3.30.300.10 11 270 1.7E-180 T 18-10-2018 CH53_2600 6d9d7487919a3441792777b387a6d18b 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 7.7E-200 T 18-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CH53_2600 6d9d7487919a3441792777b387a6d18b 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 3.9E-70 T 18-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CH53_2600 6d9d7487919a3441792777b387a6d18b 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 2.3E-43 T 18-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CH53_2600 6d9d7487919a3441792777b387a6d18b 384 SUPERFAMILY SSF55973 3 109 9.81E-48 T 18-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CH53_2600 6d9d7487919a3441792777b387a6d18b 384 Gene3D G3DSA:3.30.300.10 103 372 1.7E-180 T 18-10-2018 CH53_2600 6d9d7487919a3441792777b387a6d18b 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 2.9E-45 T 18-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CH53_2600 6d9d7487919a3441792777b387a6d18b 384 SUPERFAMILY SSF55973 233 382 7.46E-72 T 18-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CH53_2600 6d9d7487919a3441792777b387a6d18b 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.758 T 18-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CH53_2269 b4b12b7873041710b049ab1e0565f0b4 1486 Gene3D G3DSA:3.20.20.70 430 792 0.0 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2269 b4b12b7873041710b049ab1e0565f0b4 1486 Pfam PF01493 GXGXG motif 1236 1419 2.9E-76 T 18-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 CH53_2269 b4b12b7873041710b049ab1e0565f0b4 1486 Gene3D G3DSA:3.20.20.70 483 1169 0.0 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2269 b4b12b7873041710b049ab1e0565f0b4 1486 Pfam PF00310 Glutamine amidotransferases class-II 12 425 2.6E-177 T 18-10-2018 IPR017932 Glutamine amidotransferase type 2 domain CH53_2269 b4b12b7873041710b049ab1e0565f0b4 1486 SUPERFAMILY SSF56235 12 429 1.47E-150 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CH53_2269 b4b12b7873041710b049ab1e0565f0b4 1486 SUPERFAMILY SSF51395 434 1189 1.75E-252 T 18-10-2018 CH53_2269 b4b12b7873041710b049ab1e0565f0b4 1486 Gene3D G3DSA:2.160.20.60 1197 1468 1.8E-103 T 18-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 CH53_2269 b4b12b7873041710b049ab1e0565f0b4 1486 Pfam PF01645 Conserved region in glutamate synthase 793 1156 2.4E-157 T 18-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CH53_2269 b4b12b7873041710b049ab1e0565f0b4 1486 Pfam PF04898 Glutamate synthase central domain 457 737 1.7E-104 T 18-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 CH53_2269 b4b12b7873041710b049ab1e0565f0b4 1486 Gene3D G3DSA:3.60.20.10 12 545 0.0 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CH53_2269 b4b12b7873041710b049ab1e0565f0b4 1486 SUPERFAMILY SSF69336 1211 1465 1.7E-89 T 18-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 SUPERFAMILY SSF52935 329 479 9.29E-39 T 18-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 SUPERFAMILY SSF50800 74 168 6.8E-24 T 18-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 2.9E-169 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 6.1E-29 T 18-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 Gene3D G3DSA:3.20.20.60 6 341 3.1E-152 T 18-10-2018 CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 7.0E-131 T 18-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 18-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 Gene3D G3DSA:2.40.33.10 74 172 3.1E-152 T 18-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 SUPERFAMILY SSF51621 4 344 5.23E-87 T 18-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 Gene3D G3DSA:3.40.1380.20 342 474 3.1E-152 T 18-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 6.3E-52 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 6.3E-52 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 6.3E-52 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 6.3E-52 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 6.3E-52 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 6.3E-52 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_3809 74113e6ede608bea7dea8ff795ccb7e5 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 6.3E-52 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CH53_2990 01fa35b66be0cb2cc8a0e70928467fe5 449 SUPERFAMILY SSF56327 173 448 1.24E-72 T 18-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CH53_2990 01fa35b66be0cb2cc8a0e70928467fe5 449 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 18-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CH53_2990 01fa35b66be0cb2cc8a0e70928467fe5 449 Pfam PF02056 Family 4 glycosyl hydrolase 5 187 1.1E-76 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_2990 01fa35b66be0cb2cc8a0e70928467fe5 449 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 198 420 5.0E-62 T 18-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CH53_2990 01fa35b66be0cb2cc8a0e70928467fe5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 4.1E-40 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_2990 01fa35b66be0cb2cc8a0e70928467fe5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 4.1E-40 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_2990 01fa35b66be0cb2cc8a0e70928467fe5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 4.1E-40 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_2990 01fa35b66be0cb2cc8a0e70928467fe5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 4.1E-40 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_2990 01fa35b66be0cb2cc8a0e70928467fe5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 4.1E-40 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_2990 01fa35b66be0cb2cc8a0e70928467fe5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 4.1E-40 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_2990 01fa35b66be0cb2cc8a0e70928467fe5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 4.1E-40 T 18-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CH53_2990 01fa35b66be0cb2cc8a0e70928467fe5 449 Gene3D G3DSA:3.90.1820.20 1 443 9.1E-138 T 18-10-2018 CH53_2990 01fa35b66be0cb2cc8a0e70928467fe5 449 SUPERFAMILY SSF51735 4 170 5.59E-51 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_976 48a782f9078a98d48c56388d28844211 284 SUPERFAMILY SSF52374 1 281 2.6E-105 T 18-10-2018 CH53_976 48a782f9078a98d48c56388d28844211 284 Gene3D G3DSA:3.30.1300.10 180 283 9.8E-31 T 18-10-2018 CH53_976 48a782f9078a98d48c56388d28844211 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.948 T 18-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CH53_976 48a782f9078a98d48c56388d28844211 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.2E-102 T 18-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CH53_976 48a782f9078a98d48c56388d28844211 284 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 62 2.4E-7 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CH53_976 48a782f9078a98d48c56388d28844211 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 3.7E-114 T 18-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CH53_976 48a782f9078a98d48c56388d28844211 284 Gene3D G3DSA:3.40.50.620 1 179 1.2E-80 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_3056 7e4d9d403b309a6e9bcf838f1761709d 366 Gene3D G3DSA:3.30.70.270 190 365 7.9E-52 T 18-10-2018 CH53_3056 7e4d9d403b309a6e9bcf838f1761709d 366 Pfam PF05230 MASE2 domain 35 122 6.7E-32 T 18-10-2018 IPR007894 MASE2 CH53_3056 7e4d9d403b309a6e9bcf838f1761709d 366 SMART SM00267 194 365 1.0E-57 T 18-10-2018 IPR000160 GGDEF domain CH53_3056 7e4d9d403b309a6e9bcf838f1761709d 366 Pfam PF00990 Diguanylate cyclase, GGDEF domain 206 361 5.8E-45 T 18-10-2018 IPR000160 GGDEF domain CH53_3056 7e4d9d403b309a6e9bcf838f1761709d 366 SUPERFAMILY SSF55073 210 364 2.12E-46 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_3056 7e4d9d403b309a6e9bcf838f1761709d 366 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 203 364 6.0E-55 T 18-10-2018 IPR000160 GGDEF domain CH53_4102 1c5a06ebdd80c8e39af5b721b59ca4a0 383 PIRSF PIRSF003085 6 378 1.4E-125 T 18-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CH53_4102 1c5a06ebdd80c8e39af5b721b59ca4a0 383 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 1.1E-100 T 18-10-2018 CH53_4102 1c5a06ebdd80c8e39af5b721b59ca4a0 383 SUPERFAMILY SSF53335 117 370 4.8E-76 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_4102 1c5a06ebdd80c8e39af5b721b59ca4a0 383 Gene3D G3DSA:3.40.50.150 117 376 3.2E-99 T 18-10-2018 CH53_557 d89658313c2a96ad021552638e68c31c 831 SMART SM00926 40 94 6.7E-16 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_557 d89658313c2a96ad021552638e68c31c 831 Gene3D G3DSA:3.40.50.740 97 624 0.0 T 18-10-2018 CH53_557 d89658313c2a96ad021552638e68c31c 831 Pfam PF00384 Molybdopterin oxidoreductase 97 569 6.1E-92 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_557 d89658313c2a96ad021552638e68c31c 831 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 23 4.2E-6 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CH53_557 d89658313c2a96ad021552638e68c31c 831 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 7.3E-5 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CH53_557 d89658313c2a96ad021552638e68c31c 831 SUPERFAMILY SSF50692 689 828 5.65E-41 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CH53_557 d89658313c2a96ad021552638e68c31c 831 Gene3D G3DSA:3.30.200.210 40 667 0.0 T 18-10-2018 CH53_557 d89658313c2a96ad021552638e68c31c 831 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 829 32.289 T 18-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 CH53_557 d89658313c2a96ad021552638e68c31c 831 Pfam PF01568 Molydopterin dinucleotide binding domain 715 823 5.3E-24 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CH53_557 d89658313c2a96ad021552638e68c31c 831 Gene3D G3DSA:3.40.228.10 176 704 0.0 T 18-10-2018 CH53_557 d89658313c2a96ad021552638e68c31c 831 Gene3D G3DSA:2.40.40.20 705 829 1.4E-47 T 18-10-2018 CH53_557 d89658313c2a96ad021552638e68c31c 831 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 45 62 - T 18-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 CH53_557 d89658313c2a96ad021552638e68c31c 831 SUPERFAMILY SSF53706 37 702 2.36E-203 T 18-10-2018 CH53_557 d89658313c2a96ad021552638e68c31c 831 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 40 93 9.6E-18 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_557 d89658313c2a96ad021552638e68c31c 831 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 829 0.0 T 18-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 CH53_2704 2b80b04a56d5180fb8f3a61e4febf763 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 2.1E-231 T 18-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CH53_2704 2b80b04a56d5180fb8f3a61e4febf763 401 Gene3D G3DSA:3.40.640.10 34 292 4.1E-146 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_2704 2b80b04a56d5180fb8f3a61e4febf763 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 18-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CH53_2704 2b80b04a56d5180fb8f3a61e4febf763 401 Gene3D G3DSA:3.90.1150.10 22 389 4.1E-146 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_2704 2b80b04a56d5180fb8f3a61e4febf763 401 SUPERFAMILY SSF53383 5 397 1.6E-110 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_2704 2b80b04a56d5180fb8f3a61e4febf763 401 Pfam PF00266 Aminotransferase class-V 22 388 1.6E-139 T 18-10-2018 IPR000192 Aminotransferase class V domain CH53_1339 2575c5fa08a703d6be79c6db0e11dd51 313 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 299 5.1E-120 T 18-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CH53_1339 2575c5fa08a703d6be79c6db0e11dd51 313 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 312 29.938 T 18-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CH53_1339 2575c5fa08a703d6be79c6db0e11dd51 313 Gene3D G3DSA:3.40.50.300 16 296 7.5E-106 T 18-10-2018 CH53_1339 2575c5fa08a703d6be79c6db0e11dd51 313 SUPERFAMILY SSF52540 13 157 1.24E-17 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1339 2575c5fa08a703d6be79c6db0e11dd51 313 Gene3D G3DSA:1.10.20.140 119 190 7.5E-106 T 18-10-2018 CH53_1339 2575c5fa08a703d6be79c6db0e11dd51 313 Pfam PF01715 IPP transferase 46 291 1.2E-85 T 18-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CH53_3987 c150fb826a5b7f4e64305cf7730fe70f 281 SUPERFAMILY SSF52833 38 131 1.57E-18 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_3987 c150fb826a5b7f4e64305cf7730fe70f 281 Gene3D G3DSA:1.20.1050.10 133 249 2.3E-113 T 18-10-2018 CH53_3987 c150fb826a5b7f4e64305cf7730fe70f 281 SUPERFAMILY SSF47616 117 259 1.21E-34 T 18-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CH53_3987 c150fb826a5b7f4e64305cf7730fe70f 281 Pfam PF13410 Glutathione S-transferase, C-terminal domain 174 243 2.2E-9 T 18-10-2018 CH53_3987 c150fb826a5b7f4e64305cf7730fe70f 281 Pfam PF02798 Glutathione S-transferase, N-terminal domain 44 126 4.9E-9 T 18-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CH53_3987 c150fb826a5b7f4e64305cf7730fe70f 281 Gene3D G3DSA:3.40.30.10 19 255 2.3E-113 T 18-10-2018 CH53_3356 e913fe65a81c60c794105591a65ba3da 462 Gene3D G3DSA:3.40.309.10 238 417 3.5E-108 T 18-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CH53_3356 e913fe65a81c60c794105591a65ba3da 462 Gene3D G3DSA:3.40.605.10 33 237 3.5E-108 T 18-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CH53_3356 e913fe65a81c60c794105591a65ba3da 462 Pfam PF00171 Aldehyde dehydrogenase family 25 416 4.5E-29 T 18-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CH53_3356 e913fe65a81c60c794105591a65ba3da 462 SUPERFAMILY SSF53720 31 453 1.44E-57 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CH53_3356 e913fe65a81c60c794105591a65ba3da 462 PIRSF PIRSF036410 1 462 1.5E-207 T 18-10-2018 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related CH53_1332 64af54ffd8bf5c3d0fbcd2ba279951d4 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 129 1.9E-36 T 18-10-2018 IPR000944 Transcription regulator Rrf2-type CH53_1332 64af54ffd8bf5c3d0fbcd2ba279951d4 141 Gene3D G3DSA:1.10.10.10 1 136 3.2E-34 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1332 64af54ffd8bf5c3d0fbcd2ba279951d4 141 Pfam PF02082 Transcriptional regulator 2 82 4.6E-24 T 18-10-2018 IPR000944 Transcription regulator Rrf2-type CH53_1332 64af54ffd8bf5c3d0fbcd2ba279951d4 141 SUPERFAMILY SSF46785 2 131 1.43E-34 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1332 64af54ffd8bf5c3d0fbcd2ba279951d4 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 18-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CH53_1332 64af54ffd8bf5c3d0fbcd2ba279951d4 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 46.098 T 18-10-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 CH53_1905 90b1679f4c1a787d714e98ecbb92a543 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.9E-21 T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1905 90b1679f4c1a787d714e98ecbb92a543 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.9E-21 T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1905 90b1679f4c1a787d714e98ecbb92a543 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.9E-21 T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1905 90b1679f4c1a787d714e98ecbb92a543 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 1.9E-32 T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1905 90b1679f4c1a787d714e98ecbb92a543 71 SUPERFAMILY SSF143800 1 66 3.92E-26 T 18-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1905 90b1679f4c1a787d714e98ecbb92a543 71 Pfam PF01197 Ribosomal protein L31 1 64 1.3E-28 T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1905 90b1679f4c1a787d714e98ecbb92a543 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1905 90b1679f4c1a787d714e98ecbb92a543 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 29.953 T 18-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1905 90b1679f4c1a787d714e98ecbb92a543 71 Gene3D G3DSA:2.30.170.50 1 70 3.5E-32 T 18-10-2018 CH53_3695 be6ecec66e240814a2e820ff9da6dfd0 207 Gene3D G3DSA:3.40.225.10 2 207 9.7E-58 T 18-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CH53_3695 be6ecec66e240814a2e820ff9da6dfd0 207 SMART SM01007 8 187 1.7E-56 T 18-10-2018 IPR001303 Class II aldolase/adducin N-terminal CH53_3695 be6ecec66e240814a2e820ff9da6dfd0 207 SUPERFAMILY SSF53639 1 206 3.34E-59 T 18-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CH53_3695 be6ecec66e240814a2e820ff9da6dfd0 207 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 185 2.0E-42 T 18-10-2018 IPR001303 Class II aldolase/adducin N-terminal CH53_2015 53cf02988cf4c8eab82755b7651d5e37 451 Gene3D G3DSA:1.20.1250.20 18 226 4.0E-58 T 18-10-2018 CH53_2015 53cf02988cf4c8eab82755b7651d5e37 451 PIRSF PIRSF002808 5 450 2.8E-172 T 18-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 CH53_2015 53cf02988cf4c8eab82755b7651d5e37 451 Pfam PF07690 Major Facilitator Superfamily 34 400 7.8E-45 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_2015 53cf02988cf4c8eab82755b7651d5e37 451 Gene3D G3DSA:1.20.1250.20 240 449 3.4E-62 T 18-10-2018 CH53_2015 53cf02988cf4c8eab82755b7651d5e37 451 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 18-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 CH53_2015 53cf02988cf4c8eab82755b7651d5e37 451 SUPERFAMILY SSF103473 10 442 3.92E-83 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_2015 53cf02988cf4c8eab82755b7651d5e37 451 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 5.8E-262 T 18-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 CH53_2015 53cf02988cf4c8eab82755b7651d5e37 451 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 9.4E-165 T 18-10-2018 CH53_3751 6443e0c3ec73b73d3faf5c39d1581f41 195 SUPERFAMILY SSF48498 77 191 5.93E-21 T 18-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH53_3751 6443e0c3ec73b73d3faf5c39d1581f41 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.7E-6 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_3751 6443e0c3ec73b73d3faf5c39d1581f41 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.7E-6 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_3751 6443e0c3ec73b73d3faf5c39d1581f41 195 Gene3D G3DSA:1.10.357.10 1 194 1.9E-57 T 18-10-2018 CH53_3751 6443e0c3ec73b73d3faf5c39d1581f41 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 1.7E-13 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_3751 6443e0c3ec73b73d3faf5c39d1581f41 195 SUPERFAMILY SSF46689 3 70 5.07E-17 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1539 e1975f8b9a0e9835e11f842b2e34a677 225 Gene3D G3DSA:3.20.20.70 4 221 1.3E-83 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_1539 e1975f8b9a0e9835e11f842b2e34a677 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 9.3E-99 T 18-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CH53_1539 e1975f8b9a0e9835e11f842b2e34a677 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 7.7E-94 T 18-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CH53_1539 e1975f8b9a0e9835e11f842b2e34a677 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 18-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CH53_1539 e1975f8b9a0e9835e11f842b2e34a677 225 SUPERFAMILY SSF51366 3 218 1.26E-75 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CH53_1539 e1975f8b9a0e9835e11f842b2e34a677 225 PIRSF PIRSF001461 1 225 7.2E-107 T 18-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CH53_1539 e1975f8b9a0e9835e11f842b2e34a677 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 18-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 SUPERFAMILY SSF51905 1 365 6.74E-43 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 Gene3D G3DSA:3.50.50.60 7 329 3.1E-97 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 Gene3D G3DSA:3.30.390.30 346 469 1.4E-42 T 18-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 PIRSF PIRSF000350 2 466 1.6E-58 T 18-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 458 1.9E-17 T 18-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 Gene3D G3DSA:1.10.287.990 37 107 3.1E-97 T 18-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 6.4E-40 T 18-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 433 453 3.6E-40 T 18-10-2018 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 3.6E-40 T 18-10-2018 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 426 3.6E-40 T 18-10-2018 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 3.6E-40 T 18-10-2018 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.6E-40 T 18-10-2018 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.6E-40 T 18-10-2018 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 3.6E-40 T 18-10-2018 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 3.6E-40 T 18-10-2018 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 3.6E-40 T 18-10-2018 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 4.1E-19 T 18-10-2018 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 4.1E-19 T 18-10-2018 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 4.1E-19 T 18-10-2018 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.1E-19 T 18-10-2018 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 4.1E-19 T 18-10-2018 CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 Gene3D G3DSA:3.50.50.60 147 268 3.1E-97 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1926 d5cc5236e91e14eb524caa653c9f14ed 482 SUPERFAMILY SSF55424 348 466 8.08E-25 T 18-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CH53_2176 015d9b9f9be4648cc961085b17cf7b7c 306 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 306 68.83 T 18-10-2018 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 CH53_2176 015d9b9f9be4648cc961085b17cf7b7c 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 50.441 T 18-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 CH53_2176 015d9b9f9be4648cc961085b17cf7b7c 306 PIRSF PIRSF026649 3 306 1.5E-93 T 18-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CH53_2176 015d9b9f9be4648cc961085b17cf7b7c 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 306 5.9E-138 T 18-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 CH53_2176 015d9b9f9be4648cc961085b17cf7b7c 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 297 1.1E-102 T 18-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CH53_2093 c5e586af0f6f6cbc907bad075cb345ad 167 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 18-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2093 c5e586af0f6f6cbc907bad075cb345ad 167 Gene3D G3DSA:3.30.70.1730 1 126 6.4E-35 T 18-10-2018 CH53_2093 c5e586af0f6f6cbc907bad075cb345ad 167 Pfam PF00466 Ribosomal protein L10 6 101 6.3E-25 T 18-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CH53_2093 c5e586af0f6f6cbc907bad075cb345ad 167 SUPERFAMILY SSF160369 4 162 3.14E-47 T 18-10-2018 CH53_2093 c5e586af0f6f6cbc907bad075cb345ad 167 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 157 3.0E-4 T 18-10-2018 CH53_2093 c5e586af0f6f6cbc907bad075cb345ad 167 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.221 T 18-10-2018 IPR022973 Ribosomal protein L10 CH53_1149 a142b598f93d4ed249ae2ca8dd205bc6 210 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 8.8E-79 T 18-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 CH53_1149 a142b598f93d4ed249ae2ca8dd205bc6 210 Pfam PF02734 DAK2 domain 32 205 1.4E-56 T 18-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CH53_1149 a142b598f93d4ed249ae2ca8dd205bc6 210 SUPERFAMILY SSF101473 3 206 2.88E-59 T 18-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CH53_1149 a142b598f93d4ed249ae2ca8dd205bc6 210 SMART SM01120 32 206 4.0E-83 T 18-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CH53_1149 a142b598f93d4ed249ae2ca8dd205bc6 210 Gene3D G3DSA:1.25.40.340 1 209 2.7E-73 T 18-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CH53_1187 975c74ec0771049474680055c299513f 402 Pfam PF07690 Major Facilitator Superfamily 21 194 1.7E-23 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_1187 975c74ec0771049474680055c299513f 402 SUPERFAMILY SSF103473 10 395 4.19E-38 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_1187 975c74ec0771049474680055c299513f 402 Gene3D G3DSA:1.20.1250.20 12 205 6.7E-24 T 18-10-2018 CH53_1187 975c74ec0771049474680055c299513f 402 Gene3D G3DSA:1.20.1250.20 206 400 6.6E-6 T 18-10-2018 CH53_4103 452318030922b0777b49b94f087aa33d 217 SUPERFAMILY SSF63380 1 93 1.79E-28 T 18-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CH53_4103 452318030922b0777b49b94f087aa33d 217 SUPERFAMILY SSF63380 93 199 7.65E-32 T 18-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CH53_4103 452318030922b0777b49b94f087aa33d 217 Gene3D G3DSA:2.40.30.20 94 192 2.2E-28 T 18-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_4103 452318030922b0777b49b94f087aa33d 217 Gene3D G3DSA:2.40.30.20 1 89 4.5E-33 T 18-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_4103 452318030922b0777b49b94f087aa33d 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 7.1E-84 T 18-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CH53_4103 452318030922b0777b49b94f087aa33d 217 Pfam PF00677 Lumazine binding domain 3 87 4.7E-22 T 18-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CH53_4103 452318030922b0777b49b94f087aa33d 217 Pfam PF00677 Lumazine binding domain 100 185 1.7E-21 T 18-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CH53_4103 452318030922b0777b49b94f087aa33d 217 PIRSF PIRSF000498 1 210 4.2E-74 T 18-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CH53_1600 6fb89ced0b2d7e5f0796f909743a738e 404 Gene3D G3DSA:1.20.1250.20 21 213 2.9E-19 T 18-10-2018 CH53_1600 6fb89ced0b2d7e5f0796f909743a738e 404 Pfam PF07690 Major Facilitator Superfamily 28 329 8.3E-31 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_1600 6fb89ced0b2d7e5f0796f909743a738e 404 SUPERFAMILY SSF103473 19 398 1.7E-48 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_1600 6fb89ced0b2d7e5f0796f909743a738e 404 Gene3D G3DSA:1.20.1250.20 218 401 1.4E-18 T 18-10-2018 CH53_1815 42ab4d7a2a68ded28c8a70ebbbc35e24 752 Pfam PF00158 Sigma-54 interaction domain 12 178 1.6E-61 T 18-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CH53_1815 42ab4d7a2a68ded28c8a70ebbbc35e24 752 Pfam PF02954 Bacterial regulatory protein, Fis family 281 316 1.4E-9 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_1815 42ab4d7a2a68ded28c8a70ebbbc35e24 752 Gene3D G3DSA:3.40.50.300 3 183 1.1E-58 T 18-10-2018 CH53_1815 42ab4d7a2a68ded28c8a70ebbbc35e24 752 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 220 229 - T 18-10-2018 IPR025944 Sigma-54 interaction domain, conserved site CH53_1815 42ab4d7a2a68ded28c8a70ebbbc35e24 752 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 285 302 8.4E-6 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_1815 42ab4d7a2a68ded28c8a70ebbbc35e24 752 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 302 322 8.4E-6 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_1815 42ab4d7a2a68ded28c8a70ebbbc35e24 752 SUPERFAMILY SSF46689 220 316 5.38E-10 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1815 42ab4d7a2a68ded28c8a70ebbbc35e24 752 Gene3D G3DSA:1.10.10.60 275 317 9.8E-10 T 18-10-2018 CH53_1815 42ab4d7a2a68ded28c8a70ebbbc35e24 752 Gene3D G3DSA:1.25.40.10 390 749 4.5E-8 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1815 42ab4d7a2a68ded28c8a70ebbbc35e24 752 SMART SM00382 32 175 2.2E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1815 42ab4d7a2a68ded28c8a70ebbbc35e24 752 Gene3D G3DSA:1.10.8.60 184 253 2.2E-17 T 18-10-2018 CH53_1815 42ab4d7a2a68ded28c8a70ebbbc35e24 752 SUPERFAMILY SSF52540 11 248 4.21E-65 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_172 057482b2ae1ea5f8c6fe002bfcd0bf45 574 Pfam PF00005 ABC transporter 356 503 2.5E-32 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_172 057482b2ae1ea5f8c6fe002bfcd0bf45 574 SUPERFAMILY SSF52540 333 572 9.5E-71 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_172 057482b2ae1ea5f8c6fe002bfcd0bf45 574 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 534 5.6E-160 T 18-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 CH53_172 057482b2ae1ea5f8c6fe002bfcd0bf45 574 SMART SM00382 365 550 3.1E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_172 057482b2ae1ea5f8c6fe002bfcd0bf45 574 Gene3D G3DSA:1.20.1560.10 4 321 9.6E-29 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_172 057482b2ae1ea5f8c6fe002bfcd0bf45 574 SUPERFAMILY SSF90123 7 327 3.27E-41 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_172 057482b2ae1ea5f8c6fe002bfcd0bf45 574 Gene3D G3DSA:3.40.50.300 330 574 2.5E-78 T 18-10-2018 CH53_172 057482b2ae1ea5f8c6fe002bfcd0bf45 574 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_172 057482b2ae1ea5f8c6fe002bfcd0bf45 574 Pfam PF00664 ABC transporter transmembrane region 30 287 1.3E-10 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CH53_3525 8ef5c15ce2d15388b9c64931f29c1a1e 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 14 33 - T 18-10-2018 IPR019844 Cold-shock conserved site CH53_3525 8ef5c15ce2d15388b9c64931f29c1a1e 66 PRINTS PR00050 Cold shock protein signature 24 33 1.7E-17 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_3525 8ef5c15ce2d15388b9c64931f29c1a1e 66 PRINTS PR00050 Cold shock protein signature 3 18 1.7E-17 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_3525 8ef5c15ce2d15388b9c64931f29c1a1e 66 PRINTS PR00050 Cold shock protein signature 39 57 1.7E-17 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_3525 8ef5c15ce2d15388b9c64931f29c1a1e 66 Pfam PF00313 'Cold-shock' DNA-binding domain 1 65 2.7E-33 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_3525 8ef5c15ce2d15388b9c64931f29c1a1e 66 Gene3D G3DSA:2.40.50.140 1 66 1.1E-30 T 18-10-2018 CH53_3525 8ef5c15ce2d15388b9c64931f29c1a1e 66 SMART SM00357 2 66 1.1E-30 T 18-10-2018 IPR011129 Cold shock domain GO:0003676 CH53_3525 8ef5c15ce2d15388b9c64931f29c1a1e 66 SUPERFAMILY SSF50249 2 65 1.52E-24 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_3525 8ef5c15ce2d15388b9c64931f29c1a1e 66 PIRSF PIRSF002599 1 66 2.4E-25 T 18-10-2018 IPR012156 Cold shock, CspA GO:0003676 CH53_561 a67d991b431f21e97045b740ae03ad48 92 Gene3D G3DSA:1.10.10.10 2 92 8.6E-35 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_561 a67d991b431f21e97045b740ae03ad48 92 Pfam PF09904 Winged helix-turn helix 3 90 8.6E-39 T 18-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 CH53_561 a67d991b431f21e97045b740ae03ad48 92 PIRSF PIRSF037266 1 92 1.0E-40 T 18-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 CH53_2567 0d294cc20ce628e69f3cfb78351dc9a7 251 SUPERFAMILY SSF53056 40 250 1.15E-53 T 18-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CH53_2567 0d294cc20ce628e69f3cfb78351dc9a7 251 Gene3D G3DSA:3.40.1050.10 47 251 6.7E-56 T 18-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CH53_2567 0d294cc20ce628e69f3cfb78351dc9a7 251 Pfam PF00484 Carbonic anhydrase 98 247 3.7E-34 T 18-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CH53_2567 0d294cc20ce628e69f3cfb78351dc9a7 251 SMART SM00947 91 251 2.4E-45 T 18-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CH53_2194 dc47471db5ded3983bccb38b6e49a092 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 1.7E-18 T 18-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CH53_2194 dc47471db5ded3983bccb38b6e49a092 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 1.7E-18 T 18-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CH53_2194 dc47471db5ded3983bccb38b6e49a092 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 1.7E-18 T 18-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CH53_2194 dc47471db5ded3983bccb38b6e49a092 154 SUPERFAMILY SSF51230 79 154 1.96E-26 T 18-10-2018 IPR011053 Single hybrid motif CH53_2194 dc47471db5ded3983bccb38b6e49a092 154 Pfam PF00364 Biotin-requiring enzyme 81 153 1.9E-25 T 18-10-2018 IPR000089 Biotin/lipoyl attachment CH53_2194 dc47471db5ded3983bccb38b6e49a092 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 4.7E-65 T 18-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CH53_2194 dc47471db5ded3983bccb38b6e49a092 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 18-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CH53_2194 dc47471db5ded3983bccb38b6e49a092 154 Gene3D G3DSA:2.40.50.100 75 154 3.1E-32 T 18-10-2018 CH53_2474 22f81ef0eccf665f95789f2304e4a1b6 391 PIRSF PIRSF031982 65 391 2.3E-84 T 18-10-2018 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL CH53_2474 22f81ef0eccf665f95789f2304e4a1b6 391 SUPERFAMILY SSF53474 104 357 2.52E-30 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_72 39ca77ee70fb13aaf779d2c7cf89dfb8 160 Pfam PF04115 Ureidoglycolate lyase 3 157 5.2E-42 T 18-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 CH53_72 39ca77ee70fb13aaf779d2c7cf89dfb8 160 Gene3D G3DSA:2.60.120.480 1 159 2.0E-55 T 18-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 CH53_72 39ca77ee70fb13aaf779d2c7cf89dfb8 160 SUPERFAMILY SSF51182 2 151 2.31E-50 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_72 39ca77ee70fb13aaf779d2c7cf89dfb8 160 PIRSF PIRSF017306 1 159 2.5E-68 T 18-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 CH53_3805 cec32aec03f195b8ca76c1e0967d2d5f 252 Pfam PF00005 ABC transporter 20 149 3.8E-29 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3805 cec32aec03f195b8ca76c1e0967d2d5f 252 SUPERFAMILY SSF52540 3 219 3.22E-54 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3805 cec32aec03f195b8ca76c1e0967d2d5f 252 Gene3D G3DSA:3.40.50.300 1 241 6.2E-59 T 18-10-2018 CH53_3805 cec32aec03f195b8ca76c1e0967d2d5f 252 SMART SM00382 29 199 7.8E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_4241 855a62e121a0b898d5d1f70618b798fb 286 Gene3D G3DSA:3.20.20.150 1 285 7.9E-76 T 18-10-2018 CH53_4241 855a62e121a0b898d5d1f70618b798fb 286 Pfam PF01261 Xylose isomerase-like TIM barrel 23 234 4.2E-32 T 18-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CH53_4241 855a62e121a0b898d5d1f70618b798fb 286 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 2 284 7.5E-148 T 18-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 CH53_4241 855a62e121a0b898d5d1f70618b798fb 286 SUPERFAMILY SSF51658 11 278 7.99E-54 T 18-10-2018 IPR036237 Xylose isomerase-like superfamily CH53_3897 113814af219aab69f24b568a2c32e018 339 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 12 336 7.2E-125 T 18-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CH53_3897 113814af219aab69f24b568a2c32e018 339 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 10 338 38.835 T 18-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CH53_3897 113814af219aab69f24b568a2c32e018 339 SUPERFAMILY SSF47648 11 74 8.11E-15 T 18-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_3897 113814af219aab69f24b568a2c32e018 339 Pfam PF02885 Glycosyl transferase family, helical bundle domain 11 69 1.3E-12 T 18-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_3897 113814af219aab69f24b568a2c32e018 339 Gene3D G3DSA:3.40.1030.10 74 328 8.1E-124 T 18-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_3897 113814af219aab69f24b568a2c32e018 339 Pfam PF00591 Glycosyl transferase family, a/b domain 81 328 1.3E-98 T 18-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_3897 113814af219aab69f24b568a2c32e018 339 SUPERFAMILY SSF52418 77 335 3.66E-92 T 18-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_3897 113814af219aab69f24b568a2c32e018 339 Gene3D G3DSA:1.20.970.10 17 190 8.1E-124 T 18-10-2018 CH53_1669 08dc5752db365db8f0b6e2f2fb5dd23a 823 Gene3D G3DSA:2.60.40.2070 748 823 5.8E-23 T 18-10-2018 CH53_1669 08dc5752db365db8f0b6e2f2fb5dd23a 823 Pfam PF13953 PapC C-terminal domain 751 805 2.3E-11 T 18-10-2018 IPR025949 PapC-like, C-terminal domain CH53_1669 08dc5752db365db8f0b6e2f2fb5dd23a 823 Gene3D G3DSA:2.60.40.3110 259 347 2.2E-29 T 18-10-2018 CH53_1669 08dc5752db365db8f0b6e2f2fb5dd23a 823 SUPERFAMILY SSF141729 24 145 1.57E-29 T 18-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 CH53_1669 08dc5752db365db8f0b6e2f2fb5dd23a 823 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 301 311 - T 18-10-2018 IPR018030 Fimbrial membrane usher, conserved site CH53_1669 08dc5752db365db8f0b6e2f2fb5dd23a 823 Pfam PF00577 Outer membrane usher protein 188 738 5.1E-167 T 18-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 CH53_1669 08dc5752db365db8f0b6e2f2fb5dd23a 823 Gene3D G3DSA:2.60.40.2610 653 744 4.1E-12 T 18-10-2018 CH53_1669 08dc5752db365db8f0b6e2f2fb5dd23a 823 Pfam PF13954 PapC N-terminal domain 26 169 5.6E-35 T 18-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 CH53_1669 08dc5752db365db8f0b6e2f2fb5dd23a 823 Gene3D G3DSA:3.10.20.410 24 146 1.7E-20 T 18-10-2018 CH53_2233 f80b66dfce04c89aa21b1bbff6d024de 471 Gene3D G3DSA:3.30.1360.60 2 78 5.5E-23 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_2233 f80b66dfce04c89aa21b1bbff6d024de 471 SUPERFAMILY SSF55604 10 82 1.44E-20 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_2233 f80b66dfce04c89aa21b1bbff6d024de 471 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_2233 f80b66dfce04c89aa21b1bbff6d024de 471 Pfam PF02378 Phosphotransferase system, EIIC 112 404 1.3E-33 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_2233 f80b66dfce04c89aa21b1bbff6d024de 471 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 1.9E-17 T 18-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CH53_2233 f80b66dfce04c89aa21b1bbff6d024de 471 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 460 2.1E-212 T 18-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 CH53_2233 f80b66dfce04c89aa21b1bbff6d024de 471 Pfam PF00367 phosphotransferase system, EIIB 11 42 2.6E-13 T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_3329 7e6742a44860948290d86f0640827605 196 Pfam PF00117 Glutamine amidotransferase class-I 35 194 7.2E-19 T 18-10-2018 IPR017926 Glutamine amidotransferase CH53_3329 7e6742a44860948290d86f0640827605 196 Gene3D G3DSA:3.40.50.880 1 196 8.8E-69 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_3329 7e6742a44860948290d86f0640827605 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.725 T 18-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CH53_3329 7e6742a44860948290d86f0640827605 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-5 T 18-10-2018 CH53_3329 7e6742a44860948290d86f0640827605 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 9.7E-5 T 18-10-2018 CH53_3329 7e6742a44860948290d86f0640827605 196 SUPERFAMILY SSF52317 3 195 4.13E-53 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_3329 7e6742a44860948290d86f0640827605 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 6.4E-70 T 18-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CH53_3329 7e6742a44860948290d86f0640827605 196 PIRSF PIRSF000495 1 196 9.8E-64 T 18-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CH53_1606 4136de7e0f1634f74dd8752edf4ebe56 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 36.611 T 18-10-2018 IPR019598 Universal stress protein B CH53_1606 4136de7e0f1634f74dd8752edf4ebe56 111 Pfam PF10625 Universal stress protein B (UspB) 1 105 3.1E-54 T 18-10-2018 IPR019598 Universal stress protein B CH53_3467 7fe4e9678ef82edeb4abe8e687e3e7fe 357 SUPERFAMILY SSF56235 29 326 2.85E-95 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CH53_3467 7fe4e9678ef82edeb4abe8e687e3e7fe 357 Gene3D G3DSA:3.60.60.10 26 347 3.8E-128 T 18-10-2018 CH53_3467 7fe4e9678ef82edeb4abe8e687e3e7fe 357 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 29 317 1.9E-46 T 18-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal CH53_4059 ad5d3f6e54f6463d3a2bd8b654058836 115 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 4 115 4.1E-40 T 18-10-2018 IPR014320 Phage shock protein, PspC CH53_4059 ad5d3f6e54f6463d3a2bd8b654058836 115 Pfam PF04024 PspC domain 4 61 9.7E-17 T 18-10-2018 IPR007168 Phage shock protein, PspC, N-terminal CH53_550 d9a50b25d749a8f4322e5ef7282472bf 151 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 31.954 T 18-10-2018 IPR003791 Protein of unknown function UPF0178 CH53_550 d9a50b25d749a8f4322e5ef7282472bf 151 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 7.2E-51 T 18-10-2018 IPR003791 Protein of unknown function UPF0178 CH53_1312 c1a094989fbe4f7fb8a00977e07d3cc0 578 Gene3D G3DSA:3.10.20.310 102 189 3.3E-30 T 18-10-2018 CH53_1312 c1a094989fbe4f7fb8a00977e07d3cc0 578 Gene3D G3DSA:3.10.20.310 21 101 3.2E-31 T 18-10-2018 CH53_1312 c1a094989fbe4f7fb8a00977e07d3cc0 578 Pfam PF07244 Surface antigen variable number repeat 190 251 1.1E-6 T 18-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CH53_1312 c1a094989fbe4f7fb8a00977e07d3cc0 578 Gene3D G3DSA:3.10.20.310 190 266 8.9E-25 T 18-10-2018 CH53_1312 c1a094989fbe4f7fb8a00977e07d3cc0 578 Pfam PF01103 Surface antigen 358 575 4.8E-29 T 18-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CH53_1312 c1a094989fbe4f7fb8a00977e07d3cc0 578 Gene3D G3DSA:2.40.160.50 267 578 1.6E-122 T 18-10-2018 CH53_1312 c1a094989fbe4f7fb8a00977e07d3cc0 578 Pfam PF17243 POTRA domain TamA domain 1 26 100 1.9E-20 T 18-10-2018 IPR035243 TamA, POTRA domain 1 CH53_60 0a5182c589b1f0b484099873687dd6d9 555 Gene3D G3DSA:3.40.50.261 192 331 8.0E-182 T 18-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CH53_60 0a5182c589b1f0b484099873687dd6d9 555 Pfam PF02629 CoA binding domain 195 286 3.5E-8 T 18-10-2018 IPR003781 CoA-binding GO:0048037 CH53_60 0a5182c589b1f0b484099873687dd6d9 555 Pfam PF00549 CoA-ligase 336 489 3.9E-47 T 18-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CH53_60 0a5182c589b1f0b484099873687dd6d9 555 Gene3D G3DSA:3.40.50.720 106 554 8.0E-182 T 18-10-2018 CH53_60 0a5182c589b1f0b484099873687dd6d9 555 SUPERFAMILY SSF52210 328 494 7.2E-7 T 18-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CH53_60 0a5182c589b1f0b484099873687dd6d9 555 Gene3D G3DSA:3.40.50.261 332 496 8.0E-182 T 18-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CH53_60 0a5182c589b1f0b484099873687dd6d9 555 SUPERFAMILY SSF52210 187 317 1.2E-14 T 18-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CH53_1862 b49e842164c3a8362e5dfc7eaee6d05d 260 Pfam PF00535 Glycosyl transferase family 2 8 133 6.2E-19 T 18-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CH53_1862 b49e842164c3a8362e5dfc7eaee6d05d 260 SUPERFAMILY SSF53448 4 159 4.59E-28 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_1862 b49e842164c3a8362e5dfc7eaee6d05d 260 Gene3D G3DSA:3.90.550.10 1 201 2.6E-27 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_3015 05957186e3dc260a923574194137a159 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 66 7.8E-18 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3015 05957186e3dc260a923574194137a159 302 SUPERFAMILY SSF46785 5 84 1.54E-19 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3015 05957186e3dc260a923574194137a159 302 Pfam PF03466 LysR substrate binding domain 94 291 5.4E-24 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_3015 05957186e3dc260a923574194137a159 302 SUPERFAMILY SSF53850 96 294 4.71E-25 T 18-10-2018 CH53_3015 05957186e3dc260a923574194137a159 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.5E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3015 05957186e3dc260a923574194137a159 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.5E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3015 05957186e3dc260a923574194137a159 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.5E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3015 05957186e3dc260a923574194137a159 302 Gene3D G3DSA:3.40.190.10 164 260 1.1E-44 T 18-10-2018 CH53_3015 05957186e3dc260a923574194137a159 302 Gene3D G3DSA:1.10.10.10 7 92 1.5E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3015 05957186e3dc260a923574194137a159 302 Gene3D G3DSA:3.40.190.10 104 288 1.1E-44 T 18-10-2018 CH53_302 f1c867da7fa41f83f3e999612e4fcd38 508 Pfam PF13347 MFS/sugar transport protein 13 445 1.7E-49 T 18-10-2018 CH53_302 f1c867da7fa41f83f3e999612e4fcd38 508 Gene3D G3DSA:1.20.1250.20 3 440 1.6E-14 T 18-10-2018 CH53_302 f1c867da7fa41f83f3e999612e4fcd38 508 SUPERFAMILY SSF103473 8 447 4.05E-30 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_1641 c130125f38157a9eafe2a68f7fbabc0d 334 SUPERFAMILY SSF52540 12 260 1.25E-71 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1641 c130125f38157a9eafe2a68f7fbabc0d 334 Pfam PF00005 ABC transporter 37 188 1.1E-31 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1641 c130125f38157a9eafe2a68f7fbabc0d 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 305 4.8E-18 T 18-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CH53_1641 c130125f38157a9eafe2a68f7fbabc0d 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 323 2.1E-25 T 18-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CH53_1641 c130125f38157a9eafe2a68f7fbabc0d 334 Gene3D G3DSA:3.40.50.300 9 334 2.7E-94 T 18-10-2018 CH53_1641 c130125f38157a9eafe2a68f7fbabc0d 334 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1641 c130125f38157a9eafe2a68f7fbabc0d 334 SMART SM00382 46 238 3.3E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1293 da0c2ba59a2edf374151470c64d421b0 360 SUPERFAMILY SSF55874 186 350 4.71E-30 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1293 da0c2ba59a2edf374151470c64d421b0 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 9.8E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1293 da0c2ba59a2edf374151470c64d421b0 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 9.8E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1293 da0c2ba59a2edf374151470c64d421b0 360 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 348 1.7E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_1293 da0c2ba59a2edf374151470c64d421b0 360 Gene3D G3DSA:1.10.287.130 87 197 9.8E-18 T 18-10-2018 CH53_1293 da0c2ba59a2edf374151470c64d421b0 360 SMART SM00388 136 196 1.1E-9 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_1293 da0c2ba59a2edf374151470c64d421b0 360 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 195 2.4E-8 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_1293 da0c2ba59a2edf374151470c64d421b0 360 SUPERFAMILY SSF47384 121 194 2.94E-12 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_1293 da0c2ba59a2edf374151470c64d421b0 360 Gene3D G3DSA:3.30.565.10 205 353 3.5E-27 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1293 da0c2ba59a2edf374151470c64d421b0 360 SMART SM00387 242 351 5.9E-25 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_855 42c42bc63e6565ca56d205240c2d9ed5 496 SUPERFAMILY SSF53067 257 494 3.53E-40 T 18-10-2018 CH53_855 42c42bc63e6565ca56d205240c2d9ed5 496 PIRSF PIRSF000538 2 496 1.7E-74 T 18-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_855 42c42bc63e6565ca56d205240c2d9ed5 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 253 4.9E-64 T 18-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CH53_855 42c42bc63e6565ca56d205240c2d9ed5 496 Gene3D G3DSA:3.30.420.40 247 496 9.1E-46 T 18-10-2018 CH53_855 42c42bc63e6565ca56d205240c2d9ed5 496 SUPERFAMILY SSF53067 4 253 3.74E-56 T 18-10-2018 CH53_855 42c42bc63e6565ca56d205240c2d9ed5 496 Gene3D G3DSA:3.30.420.40 1 245 2.7E-65 T 18-10-2018 CH53_855 42c42bc63e6565ca56d205240c2d9ed5 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 360 380 - T 18-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_855 42c42bc63e6565ca56d205240c2d9ed5 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 264 446 1.2E-17 T 18-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CH53_529 099b02916f022b3beb02e9201748550e 227 SMART SM00448 1 111 8.4E-39 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_529 099b02916f022b3beb02e9201748550e 227 SUPERFAMILY SSF46894 126 226 3.4E-25 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_529 099b02916f022b3beb02e9201748550e 227 SUPERFAMILY SSF52172 1 123 1.32E-36 T 18-10-2018 IPR011006 CheY-like superfamily CH53_529 099b02916f022b3beb02e9201748550e 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 5.0E-20 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_529 099b02916f022b3beb02e9201748550e 227 Gene3D G3DSA:3.40.50.2300 1 118 2.2E-32 T 18-10-2018 CH53_529 099b02916f022b3beb02e9201748550e 227 Gene3D G3DSA:1.10.10.10 119 227 1.1E-29 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_529 099b02916f022b3beb02e9201748550e 227 Pfam PF00072 Response regulator receiver domain 3 111 4.4E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_529 099b02916f022b3beb02e9201748550e 227 SMART SM00862 150 226 9.0E-21 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_3929 4fcf565651210286f7bab60db6136d51 213 Gene3D G3DSA:1.10.1670.10 11 203 1.9E-77 T 18-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CH53_3929 4fcf565651210286f7bab60db6136d51 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.1E-7 T 18-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CH53_3929 4fcf565651210286f7bab60db6136d51 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 2.0E-87 T 18-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CH53_3929 4fcf565651210286f7bab60db6136d51 213 Gene3D G3DSA:1.10.340.30 21 132 1.9E-77 T 18-10-2018 CH53_3929 4fcf565651210286f7bab60db6136d51 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.4E-19 T 18-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CH53_3929 4fcf565651210286f7bab60db6136d51 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 18-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CH53_3929 4fcf565651210286f7bab60db6136d51 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 18-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CH53_3929 4fcf565651210286f7bab60db6136d51 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.968 T 18-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CH53_3929 4fcf565651210286f7bab60db6136d51 213 SUPERFAMILY SSF48150 2 207 8.17E-73 T 18-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CH53_3929 4fcf565651210286f7bab60db6136d51 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 18-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CH53_3929 4fcf565651210286f7bab60db6136d51 213 PIRSF PIRSF001435 1 211 9.5E-51 T 18-10-2018 CH53_3929 4fcf565651210286f7bab60db6136d51 213 SMART SM00478 38 185 2.2E-53 T 18-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CH53_3929 4fcf565651210286f7bab60db6136d51 213 SMART SM00525 186 206 4.4E-5 T 18-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CH53_3967 bcf1d140dd7a69af191ca4e31dbd879d 405 Gene3D G3DSA:3.30.420.40 92 382 6.6E-90 T 18-10-2018 CH53_3967 bcf1d140dd7a69af191ca4e31dbd879d 405 SUPERFAMILY SSF46785 12 77 3.49E-16 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3967 bcf1d140dd7a69af191ca4e31dbd879d 405 Gene3D G3DSA:1.10.10.10 1 82 1.5E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3967 bcf1d140dd7a69af191ca4e31dbd879d 405 SUPERFAMILY SSF53067 88 394 1.86E-43 T 18-10-2018 CH53_3967 bcf1d140dd7a69af191ca4e31dbd879d 405 Pfam PF00480 ROK family 96 388 2.0E-49 T 18-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CH53_3967 bcf1d140dd7a69af191ca4e31dbd879d 405 Gene3D G3DSA:3.30.420.40 209 377 6.6E-90 T 18-10-2018 CH53_2191 f2fba00973961de6c2bfeab0a9a5dee7 484 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 18-10-2018 IPR018212 Sodium/solute symporter, conserved site CH53_2191 f2fba00973961de6c2bfeab0a9a5dee7 484 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 472 2.0E-239 T 18-10-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0036376 CH53_2191 f2fba00973961de6c2bfeab0a9a5dee7 484 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 18-10-2018 IPR018212 Sodium/solute symporter, conserved site CH53_2191 f2fba00973961de6c2bfeab0a9a5dee7 484 Pfam PF00474 Sodium:solute symporter family 36 432 4.7E-132 T 18-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CH53_2191 f2fba00973961de6c2bfeab0a9a5dee7 484 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 3.6E-108 T 18-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CH53_2191 f2fba00973961de6c2bfeab0a9a5dee7 484 Gene3D G3DSA:1.20.1730.10 25 481 3.0E-84 T 18-10-2018 IPR038377 Sodium/glucose symporter superfamily CH53_4251 d98cde1af1f709b974fc8d1be4a61691 289 Pfam PF03881 Fructosamine kinase 1 285 8.8E-117 T 18-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CH53_4251 d98cde1af1f709b974fc8d1be4a61691 289 PIRSF PIRSF006221 1 287 6.8E-91 T 18-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CH53_4251 d98cde1af1f709b974fc8d1be4a61691 289 Gene3D G3DSA:3.30.200.20 1 92 5.3E-20 T 18-10-2018 CH53_4251 d98cde1af1f709b974fc8d1be4a61691 289 Gene3D G3DSA:3.90.1200.10 98 286 1.5E-58 T 18-10-2018 CH53_4251 d98cde1af1f709b974fc8d1be4a61691 289 SUPERFAMILY SSF56112 4 280 1.68E-39 T 18-10-2018 IPR011009 Protein kinase-like domain superfamily CH53_4409 2aff502981c6b9dd2d595d7fecb7a146 411 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 408 2.3E-155 T 18-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CH53_4409 2aff502981c6b9dd2d595d7fecb7a146 411 Pfam PF01546 Peptidase family M20/M25/M40 139 400 3.4E-15 T 18-10-2018 IPR002933 Peptidase M20 GO:0016787 CH53_4409 2aff502981c6b9dd2d595d7fecb7a146 411 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 18-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CH53_4409 2aff502981c6b9dd2d595d7fecb7a146 411 Gene3D G3DSA:3.30.70.360 208 319 2.0E-175 T 18-10-2018 CH53_4409 2aff502981c6b9dd2d595d7fecb7a146 411 PIRSF PIRSF037215 1 408 5.0E-183 T 18-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CH53_4409 2aff502981c6b9dd2d595d7fecb7a146 411 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 18-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CH53_4409 2aff502981c6b9dd2d595d7fecb7a146 411 SUPERFAMILY SSF53187 1 400 4.02E-78 T 18-10-2018 CH53_4409 2aff502981c6b9dd2d595d7fecb7a146 411 SUPERFAMILY SSF55031 208 320 2.41E-42 T 18-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CH53_4409 2aff502981c6b9dd2d595d7fecb7a146 411 Gene3D G3DSA:3.40.630.10 4 400 2.0E-175 T 18-10-2018 CH53_4409 2aff502981c6b9dd2d595d7fecb7a146 411 Pfam PF07687 Peptidase dimerisation domain 206 302 1.9E-12 T 18-10-2018 IPR011650 Peptidase M20, dimerisation domain CH53_4409 2aff502981c6b9dd2d595d7fecb7a146 411 Hamap MF_00550 Peptidase T [pepT]. 1 404 54.804 T 18-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CH53_1828 4a90eb33e3ca258115ab4bba1157ecf4 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.409 T 18-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CH53_1828 4a90eb33e3ca258115ab4bba1157ecf4 207 Pfam PF00625 Guanylate kinase 5 186 3.2E-67 T 18-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CH53_1828 4a90eb33e3ca258115ab4bba1157ecf4 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.1E-74 T 18-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CH53_1828 4a90eb33e3ca258115ab4bba1157ecf4 207 Gene3D G3DSA:3.30.63.10 37 96 4.4E-74 T 18-10-2018 CH53_1828 4a90eb33e3ca258115ab4bba1157ecf4 207 SUPERFAMILY SSF52540 3 189 4.44E-69 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1828 4a90eb33e3ca258115ab4bba1157ecf4 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 18-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CH53_1828 4a90eb33e3ca258115ab4bba1157ecf4 207 Gene3D G3DSA:3.40.50.300 8 183 4.4E-74 T 18-10-2018 CH53_1828 4a90eb33e3ca258115ab4bba1157ecf4 207 SMART SM00072 3 187 5.6E-79 T 18-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CH53_4012 0a873332ad116165cf241a37550c2687 259 Gene3D G3DSA:2.60.120.620 20 244 1.1E-8 T 18-10-2018 CH53_4012 0a873332ad116165cf241a37550c2687 259 SUPERFAMILY SSF51197 25 241 7.55E-10 T 18-10-2018 CH53_4126 35bce363346758fabcb2e6fb301cf4d2 503 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 23 489 45.541 T 18-10-2018 IPR003846 Uncharacterised protein family UPF0061 CH53_4126 35bce363346758fabcb2e6fb301cf4d2 503 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 26 473 1.3E-153 T 18-10-2018 IPR003846 Uncharacterised protein family UPF0061 CH53_1505 24e1b938c7ef8b8f883dc44d46b6c729 183 SUPERFAMILY SSF52218 5 176 8.38E-48 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_1505 24e1b938c7ef8b8f883dc44d46b6c729 183 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 1 182 50.899 T 18-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CH53_1505 24e1b938c7ef8b8f883dc44d46b6c729 183 Gene3D G3DSA:3.40.50.360 6 177 2.4E-51 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_1505 24e1b938c7ef8b8f883dc44d46b6c729 183 Pfam PF02525 Flavodoxin-like fold 6 173 3.4E-40 T 18-10-2018 IPR003680 Flavodoxin-like fold CH53_3414 71cca600f8ac7549d2646093641c4008 880 Gene3D G3DSA:1.10.8.60 782 876 9.7E-13 T 18-10-2018 CH53_3414 71cca600f8ac7549d2646093641c4008 880 SUPERFAMILY SSF81923 12 126 6.28E-17 T 18-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CH53_3414 71cca600f8ac7549d2646093641c4008 880 Gene3D G3DSA:3.40.50.300 185 378 3.4E-62 T 18-10-2018 CH53_3414 71cca600f8ac7549d2646093641c4008 880 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 330 342 - T 18-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CH53_3414 71cca600f8ac7549d2646093641c4008 880 Gene3D G3DSA:3.40.50.300 380 558 2.3E-40 T 18-10-2018 CH53_3414 71cca600f8ac7549d2646093641c4008 880 Pfam PF07724 AAA domain (Cdc48 subfamily) 611 775 7.0E-40 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CH53_3414 71cca600f8ac7549d2646093641c4008 880 SMART SM01086 782 875 3.2E-11 T 18-10-2018 IPR019489 Clp ATPase, C-terminal CH53_3414 71cca600f8ac7549d2646093641c4008 880 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 864 0.0 T 18-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 CH53_3414 71cca600f8ac7549d2646093641c4008 880 Gene3D G3DSA:1.10.1780.10 2 161 2.0E-43 T 18-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CH53_3414 71cca600f8ac7549d2646093641c4008 880 SUPERFAMILY SSF52540 560 852 8.78E-63 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3414 71cca600f8ac7549d2646093641c4008 880 SMART SM00382 611 762 3.7E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3414 71cca600f8ac7549d2646093641c4008 880 SMART SM00382 234 379 1.9E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3414 71cca600f8ac7549d2646093641c4008 880 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 782 860 8.9E-14 T 18-10-2018 IPR019489 Clp ATPase, C-terminal CH53_3414 71cca600f8ac7549d2646093641c4008 880 Gene3D G3DSA:3.40.50.300 564 780 1.3E-66 T 18-10-2018 CH53_3414 71cca600f8ac7549d2646093641c4008 880 SUPERFAMILY SSF52540 196 527 2.99E-66 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3414 71cca600f8ac7549d2646093641c4008 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 689 707 2.0E-32 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_3414 71cca600f8ac7549d2646093641c4008 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 2.0E-32 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_3414 71cca600f8ac7549d2646093641c4008 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 660 678 2.0E-32 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_3414 71cca600f8ac7549d2646093641c4008 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 722 736 2.0E-32 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_3414 71cca600f8ac7549d2646093641c4008 880 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 239 351 1.2E-9 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CH53_3414 71cca600f8ac7549d2646093641c4008 880 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 23 66 7.2E-4 T 18-10-2018 IPR004176 Clp, N-terminal CH53_2028 ff9ab2efe975f14e6c89d8f74da047a5 505 SUPERFAMILY SSF52540 298 501 1.4E-52 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2028 ff9ab2efe975f14e6c89d8f74da047a5 505 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 230 502 65.497 T 18-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CH53_2028 ff9ab2efe975f14e6c89d8f74da047a5 505 SUPERFAMILY SSF47364 202 281 3.01E-22 T 18-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 CH53_2028 ff9ab2efe975f14e6c89d8f74da047a5 505 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 230 501 5.9E-115 T 18-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CH53_2028 ff9ab2efe975f14e6c89d8f74da047a5 505 SMART SM00962 301 502 1.6E-122 T 18-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CH53_2028 ff9ab2efe975f14e6c89d8f74da047a5 505 SMART SM00382 300 491 7.3E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2028 ff9ab2efe975f14e6c89d8f74da047a5 505 SMART SM00963 207 287 2.3E-25 T 18-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CH53_2028 ff9ab2efe975f14e6c89d8f74da047a5 505 Gene3D G3DSA:1.20.120.140 204 500 7.6E-117 T 18-10-2018 CH53_2028 ff9ab2efe975f14e6c89d8f74da047a5 505 Pfam PF02881 SRP54-type protein, helical bundle domain 218 283 5.2E-13 T 18-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CH53_2028 ff9ab2efe975f14e6c89d8f74da047a5 505 Gene3D G3DSA:3.40.50.300 299 490 7.6E-117 T 18-10-2018 CH53_2028 ff9ab2efe975f14e6c89d8f74da047a5 505 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 475 488 - T 18-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CH53_2028 ff9ab2efe975f14e6c89d8f74da047a5 505 Pfam PF00448 SRP54-type protein, GTPase domain 301 501 4.2E-77 T 18-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CH53_572 0ce2a62d05d4bb9a9a91c40756b6b0e1 150 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 5 150 18.871 T 18-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CH53_572 0ce2a62d05d4bb9a9a91c40756b6b0e1 150 Pfam PF04284 Protein of unknown function (DUF441) 9 147 3.0E-47 T 18-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CH53_572 0ce2a62d05d4bb9a9a91c40756b6b0e1 150 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 21 132 4.0E-28 T 18-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CH53_1473 449b83f9da0f9078679876dff88fcbaf 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.6E-73 T 18-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CH53_1473 449b83f9da0f9078679876dff88fcbaf 177 PIRSF PIRSF002162 1 177 1.0E-43 T 18-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1473 449b83f9da0f9078679876dff88fcbaf 177 Pfam PF00347 Ribosomal protein L6 90 164 6.6E-19 T 18-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1473 449b83f9da0f9078679876dff88fcbaf 177 Pfam PF00347 Ribosomal protein L6 11 82 2.4E-19 T 18-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1473 449b83f9da0f9078679876dff88fcbaf 177 Gene3D G3DSA:3.90.930.12 1 82 1.6E-30 T 18-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1473 449b83f9da0f9078679876dff88fcbaf 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 18-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1473 449b83f9da0f9078679876dff88fcbaf 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.0E-33 T 18-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CH53_1473 449b83f9da0f9078679876dff88fcbaf 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.0E-33 T 18-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CH53_1473 449b83f9da0f9078679876dff88fcbaf 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.0E-33 T 18-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CH53_1473 449b83f9da0f9078679876dff88fcbaf 177 SUPERFAMILY SSF56053 83 177 9.08E-36 T 18-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1473 449b83f9da0f9078679876dff88fcbaf 177 SUPERFAMILY SSF56053 1 82 2.09E-23 T 18-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1473 449b83f9da0f9078679876dff88fcbaf 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.652 T 18-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CH53_1473 449b83f9da0f9078679876dff88fcbaf 177 Gene3D G3DSA:3.90.930.12 83 177 9.7E-40 T 18-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_3877 01ad947089dfd7a3e91b00b2880540b2 301 Gene3D G3DSA:1.10.3720.10 99 297 3.1E-16 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3877 01ad947089dfd7a3e91b00b2880540b2 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 299 1.0E-25 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_3877 01ad947089dfd7a3e91b00b2880540b2 301 SUPERFAMILY SSF161098 99 282 2.88E-23 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3877 01ad947089dfd7a3e91b00b2880540b2 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 69 2.1E-13 T 18-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CH53_3109 24b08a45c503bceac6909460c10196e9 545 Gene3D G3DSA:3.10.20.310 54 136 2.4E-7 T 18-10-2018 CH53_3109 24b08a45c503bceac6909460c10196e9 545 Pfam PF08479 POTRA domain, ShlB-type 60 136 9.2E-25 T 18-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type CH53_3109 24b08a45c503bceac6909460c10196e9 545 Gene3D G3DSA:2.40.160.50 169 545 1.6E-103 T 18-10-2018 CH53_3109 24b08a45c503bceac6909460c10196e9 545 PIRSF PIRSF029745 5 545 2.8E-160 T 18-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 CH53_3109 24b08a45c503bceac6909460c10196e9 545 Pfam PF17287 POTRA domain 137 191 2.0E-21 T 18-10-2018 IPR035251 ShlB, POTRA domain CH53_3109 24b08a45c503bceac6909460c10196e9 545 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 196 509 5.8E-110 T 18-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal CH53_3886 3f04b069eaf842e77737f2ee021edc2c 211 Pfam PF16031 TonB N-terminal region 2 130 5.2E-27 T 18-10-2018 CH53_3886 3f04b069eaf842e77737f2ee021edc2c 211 Gene3D G3DSA:3.30.2420.10 123 211 6.7E-28 T 18-10-2018 CH53_3886 3f04b069eaf842e77737f2ee021edc2c 211 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 134 204 7.4E-18 T 18-10-2018 IPR006260 TonB/TolA, C-terminal CH53_3886 3f04b069eaf842e77737f2ee021edc2c 211 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 133 193 4.9E-16 T 18-10-2018 IPR037682 TonB, C-terminal GO:0055085 CH53_3886 3f04b069eaf842e77737f2ee021edc2c 211 PRINTS PR01374 Gram-negative bacterial tonB protein signature 64 74 5.0E-33 T 18-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CH53_3886 3f04b069eaf842e77737f2ee021edc2c 211 PRINTS PR01374 Gram-negative bacterial tonB protein signature 128 149 5.0E-33 T 18-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CH53_3886 3f04b069eaf842e77737f2ee021edc2c 211 PRINTS PR01374 Gram-negative bacterial tonB protein signature 149 167 5.0E-33 T 18-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CH53_3886 3f04b069eaf842e77737f2ee021edc2c 211 PRINTS PR01374 Gram-negative bacterial tonB protein signature 168 185 5.0E-33 T 18-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CH53_3886 3f04b069eaf842e77737f2ee021edc2c 211 SUPERFAMILY SSF74653 129 197 9.03E-19 T 18-10-2018 CH53_2142 8ef6b0bad3e70f27ecc2c11528a0d17e 525 Gene3D G3DSA:1.10.3720.10 281 525 5.8E-72 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2142 8ef6b0bad3e70f27ecc2c11528a0d17e 525 Gene3D G3DSA:3.10.650.10 106 279 5.0E-52 T 18-10-2018 CH53_2142 8ef6b0bad3e70f27ecc2c11528a0d17e 525 Gene3D G3DSA:2.40.430.10 126 215 5.0E-52 T 18-10-2018 CH53_2142 8ef6b0bad3e70f27ecc2c11528a0d17e 525 SUPERFAMILY SSF160964 23 271 1.96E-82 T 18-10-2018 CH53_2142 8ef6b0bad3e70f27ecc2c11528a0d17e 525 SUPERFAMILY SSF161098 272 514 3.92E-59 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2142 8ef6b0bad3e70f27ecc2c11528a0d17e 525 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 309 512 1.9E-20 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_2142 8ef6b0bad3e70f27ecc2c11528a0d17e 525 Gene3D G3DSA:1.20.58.370 9 103 7.7E-39 T 18-10-2018 IPR035277 MalF, N-terminal CH53_2142 8ef6b0bad3e70f27ecc2c11528a0d17e 525 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 108 271 5.4E-62 T 18-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain CH53_1820 dcbb7408b2fac66bcda7e162968c0b27 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 7.3E-12 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1820 dcbb7408b2fac66bcda7e162968c0b27 228 SUPERFAMILY SSF46894 141 210 5.78E-15 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_1820 dcbb7408b2fac66bcda7e162968c0b27 228 Gene3D G3DSA:1.10.10.10 145 211 8.3E-15 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1820 dcbb7408b2fac66bcda7e162968c0b27 228 Pfam PF08448 PAS fold 16 126 4.4E-7 T 18-10-2018 IPR013656 PAS fold-4 CH53_1820 dcbb7408b2fac66bcda7e162968c0b27 228 SUPERFAMILY SSF55785 4 123 6.07E-5 T 18-10-2018 IPR035965 PAS domain superfamily CH53_1820 dcbb7408b2fac66bcda7e162968c0b27 228 SMART SM00421 148 205 5.1E-5 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2360 33a19a5ed00a15a1f34be1af79a5c6e4 157 Pfam PF03830 PTS system sorbose subfamily IIB component 6 152 1.1E-47 T 18-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CH53_2360 33a19a5ed00a15a1f34be1af79a5c6e4 157 Gene3D G3DSA:3.40.35.10 1 157 3.1E-57 T 18-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CH53_2360 33a19a5ed00a15a1f34be1af79a5c6e4 157 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 5 153 1.9E-58 T 18-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CH53_2360 33a19a5ed00a15a1f34be1af79a5c6e4 157 SUPERFAMILY SSF52728 5 154 2.35E-45 T 18-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CH53_296 ac16fc96224b2f70bc3c5ea1952c2734 141 Pfam PF06530 Phage antitermination protein Q 2 122 3.2E-41 T 18-10-2018 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 SUPERFAMILY SSF52374 3 647 5.63E-137 T 18-10-2018 CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 4.1E-30 T 18-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 SUPERFAMILY SSF47323 652 929 8.22E-79 T 18-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 Gene3D G3DSA:1.10.730.20 640 929 4.4E-93 T 18-10-2018 CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 Gene3D G3DSA:3.40.50.620 25 629 2.1E-231 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 3.8E-298 T 18-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 Gene3D G3DSA:3.90.740.10 195 408 2.1E-231 T 18-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 1.1E-31 T 18-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 1.1E-31 T 18-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 1.1E-31 T 18-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 1.1E-31 T 18-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 1.1E-31 T 18-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.379 T 18-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 640 3.7E-223 T 18-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 7.2E-10 T 18-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CH53_1071 e6a7bf527b433778e3dc1739982beae8 938 SUPERFAMILY SSF50677 204 403 3.66E-56 T 18-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CH53_729 bc5278981132312f1d98bceec6ed4d88 572 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 124 5.1E-51 T 18-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_729 bc5278981132312f1d98bceec6ed4d88 572 Hamap MF_01953 Urease subunit alpha [ureC]. 2 572 53.571 T 18-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_729 bc5278981132312f1d98bceec6ed4d88 572 SUPERFAMILY SSF51338 2 183 1.39E-56 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_729 bc5278981132312f1d98bceec6ed4d88 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 432 445 3.8E-27 T 18-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_729 bc5278981132312f1d98bceec6ed4d88 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 300 317 3.8E-27 T 18-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_729 bc5278981132312f1d98bceec6ed4d88 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 406 421 3.8E-27 T 18-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_729 bc5278981132312f1d98bceec6ed4d88 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 339 355 3.8E-27 T 18-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_729 bc5278981132312f1d98bceec6ed4d88 572 SUPERFAMILY SSF51556 135 571 5.53E-179 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_729 bc5278981132312f1d98bceec6ed4d88 572 Gene3D G3DSA:2.30.40.10 4 485 1.4E-278 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_729 bc5278981132312f1d98bceec6ed4d88 572 SUPERFAMILY SSF51338 414 484 4.66E-10 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_729 bc5278981132312f1d98bceec6ed4d88 572 Gene3D G3DSA:3.20.20.140 134 569 1.4E-278 T 18-10-2018 CH53_729 bc5278981132312f1d98bceec6ed4d88 572 ProSitePatterns PS01120 Urease nickel ligands signature. 132 145 - T 18-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_729 bc5278981132312f1d98bceec6ed4d88 572 ProSitePatterns PS00145 Urease active site. 322 338 - T 18-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_729 bc5278981132312f1d98bceec6ed4d88 572 Pfam PF01979 Amidohydrolase family 130 459 1.2E-70 T 18-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CH53_729 bc5278981132312f1d98bceec6ed4d88 572 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 3 571 4.3E-284 T 18-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_3667 5a1506f077ac5f2217dbef2a2cf7afd8 172 SUPERFAMILY SSF49401 26 171 4.97E-28 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_3667 5a1506f077ac5f2217dbef2a2cf7afd8 172 Pfam PF00419 Fimbrial protein 28 171 5.1E-10 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_3667 5a1506f077ac5f2217dbef2a2cf7afd8 172 Gene3D G3DSA:2.60.40.1090 25 171 8.7E-27 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_2080 6f3d96f1d8023d8a46ec1f35c1069466 345 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 209 332 2.8E-34 T 18-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_2080 6f3d96f1d8023d8a46ec1f35c1069466 345 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 8 332 2.4E-103 T 18-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_2080 6f3d96f1d8023d8a46ec1f35c1069466 345 SUPERFAMILY SSF56194 205 342 3.92E-51 T 18-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_2080 6f3d96f1d8023d8a46ec1f35c1069466 345 Gene3D G3DSA:3.90.78.10 222 345 3.0E-45 T 18-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_2080 6f3d96f1d8023d8a46ec1f35c1069466 345 Gene3D G3DSA:3.30.43.10 7 71 9.5E-16 T 18-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 CH53_2080 6f3d96f1d8023d8a46ec1f35c1069466 345 Gene3D G3DSA:3.30.465.10 72 221 2.0E-53 T 18-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CH53_2080 6f3d96f1d8023d8a46ec1f35c1069466 345 SUPERFAMILY SSF56176 7 199 1.85E-43 T 18-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CH53_2080 6f3d96f1d8023d8a46ec1f35c1069466 345 Pfam PF01565 FAD binding domain 22 153 3.9E-23 T 18-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CH53_2080 6f3d96f1d8023d8a46ec1f35c1069466 345 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 345 85.998 T 18-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_2361 c8de47d0f134ad70d58996a6dce1a21f 755 Gene3D G3DSA:3.90.199.10 31 162 7.7E-59 T 18-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CH53_2361 c8de47d0f134ad70d58996a6dce1a21f 755 Gene3D G3DSA:3.30.1360.40 163 344 1.2E-70 T 18-10-2018 CH53_2361 c8de47d0f134ad70d58996a6dce1a21f 755 SUPERFAMILY SSF101904 498 749 9.29E-52 T 18-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CH53_2361 c8de47d0f134ad70d58996a6dce1a21f 755 SMART SM00434 12 462 1.3E-236 T 18-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CH53_2361 c8de47d0f134ad70d58996a6dce1a21f 755 Gene3D G3DSA:2.120.10.90 501 725 1.3E-10 T 18-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CH53_2361 c8de47d0f134ad70d58996a6dce1a21f 755 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 469 3.4E-133 T 18-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CH53_2361 c8de47d0f134ad70d58996a6dce1a21f 755 Gene3D G3DSA:1.10.268.10 345 484 9.3E-45 T 18-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CH53_2361 c8de47d0f134ad70d58996a6dce1a21f 755 SUPERFAMILY SSF56719 32 483 5.23E-153 T 18-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CH53_2361 c8de47d0f134ad70d58996a6dce1a21f 755 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 633 1.4E-4 T 18-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CH53_2361 c8de47d0f134ad70d58996a6dce1a21f 755 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 696 2.4E-7 T 18-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CH53_2361 c8de47d0f134ad70d58996a6dce1a21f 755 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 742 0.0 T 18-10-2018 CH53_2361 c8de47d0f134ad70d58996a6dce1a21f 755 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 743 33.898 T 18-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_132 6f91810208efafe05d663cf838b85568 375 Gene3D G3DSA:2.40.160.10 22 375 2.7E-150 T 18-10-2018 IPR023614 Porin domain superfamily CH53_132 6f91810208efafe05d663cf838b85568 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 277 296 1.6E-68 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_132 6f91810208efafe05d663cf838b85568 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 1.6E-68 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_132 6f91810208efafe05d663cf838b85568 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 1.6E-68 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_132 6f91810208efafe05d663cf838b85568 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 1.6E-68 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_132 6f91810208efafe05d663cf838b85568 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 246 263 1.6E-68 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_132 6f91810208efafe05d663cf838b85568 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 1.6E-68 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_132 6f91810208efafe05d663cf838b85568 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 6.6E-15 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_132 6f91810208efafe05d663cf838b85568 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 240 252 6.6E-15 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_132 6f91810208efafe05d663cf838b85568 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 6.6E-15 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_132 6f91810208efafe05d663cf838b85568 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 6.6E-15 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_132 6f91810208efafe05d663cf838b85568 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 327 344 6.6E-15 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_132 6f91810208efafe05d663cf838b85568 375 SUPERFAMILY SSF56935 22 375 9.42E-82 T 18-10-2018 CH53_132 6f91810208efafe05d663cf838b85568 375 Pfam PF00267 Gram-negative porin 27 375 3.9E-141 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_412 71bb74d428d6c554c0e3864d64d95108 280 PIRSF PIRSF001430 19 269 8.7E-77 T 18-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_412 71bb74d428d6c554c0e3864d64d95108 280 Gene3D G3DSA:3.30.70.580 16 122 1.9E-39 T 18-10-2018 CH53_412 71bb74d428d6c554c0e3864d64d95108 280 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 20 256 6.4E-76 T 18-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_412 71bb74d428d6c554c0e3864d64d95108 280 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 19 261 34.524 T 18-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_412 71bb74d428d6c554c0e3864d64d95108 280 Pfam PF01416 tRNA pseudouridine synthase 160 262 7.7E-29 T 18-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_412 71bb74d428d6c554c0e3864d64d95108 280 Pfam PF01416 tRNA pseudouridine synthase 26 120 1.8E-9 T 18-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_412 71bb74d428d6c554c0e3864d64d95108 280 SUPERFAMILY SSF55120 19 273 1.44E-90 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_412 71bb74d428d6c554c0e3864d64d95108 280 Gene3D G3DSA:3.30.70.660 123 260 6.8E-50 T 18-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 CH53_2368 c0f6f63b3f191b9468ad48bf8394f767 385 Gene3D G3DSA:1.20.1090.10 183 385 9.0E-47 T 18-10-2018 CH53_2368 c0f6f63b3f191b9468ad48bf8394f767 385 SUPERFAMILY SSF56796 1 384 1.83E-107 T 18-10-2018 CH53_2368 c0f6f63b3f191b9468ad48bf8394f767 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 18-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CH53_2368 c0f6f63b3f191b9468ad48bf8394f767 385 Gene3D G3DSA:3.40.50.1970 1 182 2.2E-49 T 18-10-2018 CH53_2368 c0f6f63b3f191b9468ad48bf8394f767 385 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 262 282 - T 18-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CH53_2368 c0f6f63b3f191b9468ad48bf8394f767 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 358 2.0E-90 T 18-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CH53_284 77f2cb84bc3f3eb49f14b980749ae15f 356 SUPERFAMILY SSF69279 182 353 1.13E-42 T 18-10-2018 CH53_284 77f2cb84bc3f3eb49f14b980749ae15f 356 SUPERFAMILY SSF69279 7 180 2.66E-51 T 18-10-2018 CH53_284 77f2cb84bc3f3eb49f14b980749ae15f 356 Pfam PF05954 Phage late control gene D protein (GPD) 31 327 4.2E-14 T 18-10-2018 CH53_284 77f2cb84bc3f3eb49f14b980749ae15f 356 PIRSF PIRSF004440 2 356 2.9E-73 T 18-10-2018 IPR026276 Baseplate protein GpP CH53_284 77f2cb84bc3f3eb49f14b980749ae15f 356 Gene3D G3DSA:3.55.50.10 96 180 1.0E-93 T 18-10-2018 CH53_284 77f2cb84bc3f3eb49f14b980749ae15f 356 Gene3D G3DSA:2.30.300.10 12 345 1.0E-93 T 18-10-2018 CH53_284 77f2cb84bc3f3eb49f14b980749ae15f 356 Gene3D G3DSA:3.30.1920.10 204 285 1.0E-93 T 18-10-2018 IPR023399 Baseplate-like, two-layer sandwich fold CH53_755 1fec6904116aea64799dfd06ea16c9da 399 Gene3D G3DSA:3.40.50.300 34 287 3.7E-78 T 18-10-2018 CH53_755 1fec6904116aea64799dfd06ea16c9da 399 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_755 1fec6904116aea64799dfd06ea16c9da 399 Pfam PF00005 ABC transporter 45 192 7.4E-34 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_755 1fec6904116aea64799dfd06ea16c9da 399 Pfam PF00571 CBS domain 346 393 2.3E-6 T 18-10-2018 IPR000644 CBS domain CH53_755 1fec6904116aea64799dfd06ea16c9da 399 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 394 1.3E-176 T 18-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 CH53_755 1fec6904116aea64799dfd06ea16c9da 399 SUPERFAMILY SSF54631 275 396 1.01E-13 T 18-10-2018 CH53_755 1fec6904116aea64799dfd06ea16c9da 399 Gene3D G3DSA:3.10.580.10 295 395 1.3E-9 T 18-10-2018 CH53_755 1fec6904116aea64799dfd06ea16c9da 399 SUPERFAMILY SSF52540 43 271 2.66E-75 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_755 1fec6904116aea64799dfd06ea16c9da 399 SMART SM00382 53 242 1.0E-19 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 Gene3D G3DSA:3.20.19.10 653 890 9.2E-107 T 18-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 Pfam PF00330 Aconitase family (aconitate hydratase) 73 562 2.2E-180 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 Gene3D G3DSA:3.30.499.10 373 590 1.6E-100 T 18-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 Gene3D G3DSA:3.30.499.20 6 372 1.3E-158 T 18-10-2018 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 Pfam PF00694 Aconitase C-terminal domain 691 818 2.1E-49 T 18-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 Gene3D G3DSA:1.10.1440.20 592 650 2.8E-17 T 18-10-2018 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 PRINTS PR00415 Aconitase family signature 431 442 7.7E-42 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 PRINTS PR00415 Aconitase family signature 493 506 7.7E-42 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 PRINTS PR00415 Aconitase family signature 279 292 7.7E-42 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 PRINTS PR00415 Aconitase family signature 146 159 7.7E-42 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 PRINTS PR00415 Aconitase family signature 372 386 7.7E-42 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 PRINTS PR00415 Aconitase family signature 170 178 7.7E-42 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 PRINTS PR00415 Aconitase family signature 217 232 7.7E-42 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 PRINTS PR00415 Aconitase family signature 293 306 7.7E-42 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 PRINTS PR00415 Aconitase family signature 203 216 7.7E-42 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 SUPERFAMILY SSF52016 629 890 3.34E-90 T 18-10-2018 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 SUPERFAMILY SSF53732 11 626 1.57E-219 T 18-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 890 0.0 T 18-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 18-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CH53_3911 7f951790bb5b340413d6ef1bb1d1555a 890 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 18-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CH53_2708 44b72c5fbc39941faa90859a442ecc87 368 Gene3D G3DSA:3.40.50.150 177 358 1.2E-56 T 18-10-2018 CH53_2708 44b72c5fbc39941faa90859a442ecc87 368 Gene3D G3DSA:3.30.70.2810 1 80 8.4E-34 T 18-10-2018 CH53_2708 44b72c5fbc39941faa90859a442ecc87 368 SUPERFAMILY SSF53335 185 295 1.11E-11 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_2708 44b72c5fbc39941faa90859a442ecc87 368 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 2 356 85.234 T 18-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 CH53_2708 44b72c5fbc39941faa90859a442ecc87 368 Pfam PF01728 FtsJ-like methyltransferase 187 261 2.1E-7 T 18-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CH53_2708 44b72c5fbc39941faa90859a442ecc87 368 Gene3D G3DSA:3.30.2300.20 81 176 1.2E-38 T 18-10-2018 CH53_2708 44b72c5fbc39941faa90859a442ecc87 368 PIRSF PIRSF028774 2 361 1.6E-190 T 18-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 CH53_1329 b85da7ab68f38ca3c7d46581b316f1cb 543 SUPERFAMILY SSF47203 287 447 6.93E-39 T 18-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CH53_1329 b85da7ab68f38ca3c7d46581b316f1cb 543 Gene3D G3DSA:1.20.140.10 290 468 2.4E-36 T 18-10-2018 CH53_1329 b85da7ab68f38ca3c7d46581b316f1cb 543 SUPERFAMILY SSF56645 77 296 1.69E-32 T 18-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CH53_1329 b85da7ab68f38ca3c7d46581b316f1cb 543 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 289 441 2.2E-30 T 18-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CH53_1329 b85da7ab68f38ca3c7d46581b316f1cb 543 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 183 195 - T 18-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CH53_1329 b85da7ab68f38ca3c7d46581b316f1cb 543 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 181 279 1.2E-13 T 18-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CH53_1329 b85da7ab68f38ca3c7d46581b316f1cb 543 Gene3D G3DSA:2.40.110.20 130 289 4.7E-55 T 18-10-2018 CH53_2063 e1e3e5a8b5745a3d40124b9c382cf5fa 220 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.2E-32 T 18-10-2018 CH53_2063 e1e3e5a8b5745a3d40124b9c382cf5fa 220 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.2E-32 T 18-10-2018 CH53_2063 e1e3e5a8b5745a3d40124b9c382cf5fa 220 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.2E-32 T 18-10-2018 CH53_2063 e1e3e5a8b5745a3d40124b9c382cf5fa 220 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 1.0E-32 T 18-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CH53_2063 e1e3e5a8b5745a3d40124b9c382cf5fa 220 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 140 19.555 T 18-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CH53_1175 b4899a738fe66a4ecb889a70fa0ceec0 82 Pfam PF12844 Helix-turn-helix domain 14 71 6.9E-8 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_1175 b4899a738fe66a4ecb889a70fa0ceec0 82 Gene3D G3DSA:1.10.260.40 1 79 2.7E-27 T 18-10-2018 CH53_1175 b4899a738fe66a4ecb889a70fa0ceec0 82 SUPERFAMILY SSF47413 6 70 4.5E-13 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_1175 b4899a738fe66a4ecb889a70fa0ceec0 82 SMART SM00530 15 68 4.2E-5 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_63 7e888ae835524ce0d41a5e314b30a097 261 SUPERFAMILY SSF51182 16 260 3.63E-63 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_63 7e888ae835524ce0d41a5e314b30a097 261 TIGRFAM TIGR03214 ura-cupin: putative allantoin catabolism protein 3 260 9.6E-110 T 18-10-2018 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 CH53_63 7e888ae835524ce0d41a5e314b30a097 261 Pfam PF07883 Cupin domain 185 249 5.1E-8 T 18-10-2018 IPR013096 Cupin 2, conserved barrel CH53_63 7e888ae835524ce0d41a5e314b30a097 261 Gene3D G3DSA:2.60.120.10 1 261 6.4E-90 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_1554 3a1696c69f8c19f759ae975f68c62b51 293 SUPERFAMILY SSF118352 226 282 1.96E-20 T 18-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CH53_1554 3a1696c69f8c19f759ae975f68c62b51 293 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 285 32.945 T 18-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CH53_1554 3a1696c69f8c19f759ae975f68c62b51 293 Gene3D G3DSA:3.90.1280.10 227 285 1.6E-23 T 18-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CH53_1554 3a1696c69f8c19f759ae975f68c62b51 293 Pfam PF01430 Hsp33 protein 5 274 1.1E-87 T 18-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CH53_1554 3a1696c69f8c19f759ae975f68c62b51 293 Gene3D G3DSA:1.10.287.480 178 226 5.1E-23 T 18-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily CH53_1554 3a1696c69f8c19f759ae975f68c62b51 293 PIRSF PIRSF005261 1 285 4.0E-75 T 18-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CH53_1554 3a1696c69f8c19f759ae975f68c62b51 293 SUPERFAMILY SSF64397 4 233 1.07E-76 T 18-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CH53_1554 3a1696c69f8c19f759ae975f68c62b51 293 Gene3D G3DSA:3.55.30.10 1 177 7.1E-67 T 18-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CH53_1079 6e02865d2429cc4002ea8793a14e20bc 816 SUPERFAMILY SSF49695 103 205 5.39E-11 T 18-10-2018 IPR011024 Gamma-crystallin-like CH53_1079 6e02865d2429cc4002ea8793a14e20bc 816 SUPERFAMILY SSF49695 18 105 1.79E-11 T 18-10-2018 IPR011024 Gamma-crystallin-like CH53_1079 6e02865d2429cc4002ea8793a14e20bc 816 SUPERFAMILY SSF55729 715 813 8.23E-6 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_1079 6e02865d2429cc4002ea8793a14e20bc 816 Gene3D G3DSA:2.60.20.10 5 108 4.3E-19 T 18-10-2018 CH53_1079 6e02865d2429cc4002ea8793a14e20bc 816 Gene3D G3DSA:2.60.20.10 109 206 2.5E-20 T 18-10-2018 CH53_1079 6e02865d2429cc4002ea8793a14e20bc 816 Gene3D G3DSA:3.40.630.30 666 816 2.7E-5 T 18-10-2018 CH53_1079 6e02865d2429cc4002ea8793a14e20bc 816 Pfam PF08964 Beta/Gamma crystallin 24 104 2.2E-6 T 18-10-2018 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal GO:0016020|GO:0098609 CH53_1571 b973dae45c9f6d557ee2cc4f89a0d4c8 109 SUPERFAMILY SSF52821 2 100 1.24E-27 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily CH53_1571 b973dae45c9f6d557ee2cc4f89a0d4c8 109 Gene3D G3DSA:3.40.250.10 1 107 3.1E-29 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily CH53_1571 b973dae45c9f6d557ee2cc4f89a0d4c8 109 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.348 T 18-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 CH53_1571 b973dae45c9f6d557ee2cc4f89a0d4c8 109 SMART SM00450 7 102 1.3E-18 T 18-10-2018 IPR001763 Rhodanese-like domain CH53_1571 b973dae45c9f6d557ee2cc4f89a0d4c8 109 Pfam PF00581 Rhodanese-like domain 9 97 3.7E-14 T 18-10-2018 IPR001763 Rhodanese-like domain CH53_1721 08e16de01914350f6e832ea52e85b41e 481 Gene3D G3DSA:3.20.20.80 1 478 1.4E-181 T 18-10-2018 CH53_1721 08e16de01914350f6e832ea52e85b41e 481 SUPERFAMILY SSF51445 8 477 3.68E-172 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_1721 08e16de01914350f6e832ea52e85b41e 481 Pfam PF00232 Glycosyl hydrolase family 1 7 475 1.2E-171 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_1721 08e16de01914350f6e832ea52e85b41e 481 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 18-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CH53_1721 08e16de01914350f6e832ea52e85b41e 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 374 382 3.9E-17 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_1721 08e16de01914350f6e832ea52e85b41e 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 395 406 3.9E-17 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_1721 08e16de01914350f6e832ea52e85b41e 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 3.9E-17 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_1721 08e16de01914350f6e832ea52e85b41e 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 3.9E-17 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_1721 08e16de01914350f6e832ea52e85b41e 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 3.9E-17 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_2206 abde2979fc06da56341b8df82db72206 284 SUPERFAMILY SSF56317 2 267 1.83E-71 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CH53_2206 abde2979fc06da56341b8df82db72206 284 Gene3D G3DSA:3.60.110.10 1 271 1.7E-84 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CH53_2206 abde2979fc06da56341b8df82db72206 284 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 18-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site CH53_2206 abde2979fc06da56341b8df82db72206 284 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 6.1E-48 T 18-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 SUPERFAMILY SSF55785 186 296 9.67E-22 T 18-10-2018 IPR035965 PAS domain superfamily CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 SMART SM00267 452 625 8.1E-58 T 18-10-2018 IPR000160 GGDEF domain CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 Gene3D G3DSA:3.30.450.20 176 309 1.6E-20 T 18-10-2018 CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 Gene3D G3DSA:3.30.450.40 10 159 9.4E-15 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 Gene3D G3DSA:3.30.70.270 463 625 1.2E-49 T 18-10-2018 CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 SMART SM00086 416 452 500.0 T 18-10-2018 IPR001610 PAC motif CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 SMART SM00086 252 294 5.0E-5 T 18-10-2018 IPR001610 PAC motif CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 SUPERFAMILY SSF55785 330 449 3.84E-13 T 18-10-2018 IPR035965 PAS domain superfamily CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 Pfam PF00990 Diguanylate cyclase, GGDEF domain 463 619 4.5E-45 T 18-10-2018 IPR000160 GGDEF domain CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 177 301 3.3E-21 T 18-10-2018 IPR000014 PAS domain CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 343 458 6.3E-8 T 18-10-2018 IPR000014 PAS domain CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 SUPERFAMILY SSF55073 468 625 1.49E-43 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 Gene3D G3DSA:3.30.450.20 335 462 5.4E-15 T 18-10-2018 CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 SMART SM00091 179 245 2.0E-5 T 18-10-2018 IPR000014 PAS domain CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 SMART SM00091 345 411 0.023 T 18-10-2018 IPR000014 PAS domain CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 Pfam PF08448 PAS fold 352 453 3.0E-8 T 18-10-2018 IPR013656 PAS fold-4 CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 Pfam PF08447 PAS fold 205 287 1.5E-10 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 SMART SM00065 26 170 4.8E-7 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 462 622 3.0E-38 T 18-10-2018 IPR000160 GGDEF domain CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 Pfam PF01590 GAF domain 31 152 3.2E-5 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_2494 a5a213c5454ed24c8e722d20ef4ed2bf 625 SUPERFAMILY SSF55781 31 158 4.71E-24 T 18-10-2018 CH53_1302 e9cb6d4ef937a0fcf304497e45cb107b 313 SUPERFAMILY SSF56327 146 312 1.7E-42 T 18-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CH53_1302 e9cb6d4ef937a0fcf304497e45cb107b 313 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 1.5E-136 T 18-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 CH53_1302 e9cb6d4ef937a0fcf304497e45cb107b 313 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 59.788 T 18-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CH53_1302 e9cb6d4ef937a0fcf304497e45cb107b 313 Gene3D G3DSA:3.40.50.720 1 146 8.3E-64 T 18-10-2018 CH53_1302 e9cb6d4ef937a0fcf304497e45cb107b 313 PIRSF PIRSF000102 1 312 3.9E-60 T 18-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CH53_1302 e9cb6d4ef937a0fcf304497e45cb107b 313 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 2.9E-51 T 18-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CH53_1302 e9cb6d4ef937a0fcf304497e45cb107b 313 SUPERFAMILY SSF51735 1 145 5.37E-39 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1302 e9cb6d4ef937a0fcf304497e45cb107b 313 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 18-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CH53_1302 e9cb6d4ef937a0fcf304497e45cb107b 313 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 2.6E-45 T 18-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CH53_1302 e9cb6d4ef937a0fcf304497e45cb107b 313 Gene3D G3DSA:3.90.110.10 147 312 1.9E-55 T 18-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 Pfam PF10410 DnaB-helicase binding domain of primase 370 424 2.5E-12 T 18-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 1.9E-150 T 18-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 SMART SM00400 36 90 1.4E-36 T 18-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 Gene3D G3DSA:1.10.860.10 434 581 1.5E-52 T 18-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 9.7E-35 T 18-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 SUPERFAMILY SSF56731 115 427 3.05E-114 T 18-10-2018 CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 Gene3D G3DSA:3.40.1360.10 241 367 5.9E-44 T 18-10-2018 CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 Gene3D G3DSA:3.90.980.10 115 240 3.2E-48 T 18-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 SMART SM00766 450 575 2.2E-55 T 18-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 Gene3D G3DSA:1.20.50.20 368 426 7.8E-29 T 18-10-2018 CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 SUPERFAMILY SSF57783 4 100 2.21E-35 T 18-10-2018 CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 Hamap MF_00974 DNA primase [dnaG]. 4 576 30.446 T 18-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 SUPERFAMILY SSF117023 447 578 6.15E-46 T 18-10-2018 CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 Pfam PF13155 Toprim-like 263 348 2.0E-14 T 18-10-2018 CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 6.2E-44 T 18-10-2018 IPR013264 DNA primase, catalytic core, N-terminal CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 Pfam PF01807 CHC2 zinc finger 7 100 1.0E-40 T 18-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 Gene3D G3DSA:3.90.580.10 1 101 9.6E-38 T 18-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 CH53_2325 10d485f91982f9bdf6ca845705ceb7bb 582 SMART SM00493 259 330 1.8E-22 T 18-10-2018 IPR006171 TOPRIM domain CH53_142 71a3df8a653af441bc19faffcbe69144 255 Pfam PF02698 DUF218 domain 80 241 7.1E-25 T 18-10-2018 IPR003848 Domain of unknown function DUF218 CH53_2763 bdde2334e206649b9b2ac5138807a023 364 PIRSF PIRSF006280 1 363 6.8E-180 T 18-10-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 CH53_2763 bdde2334e206649b9b2ac5138807a023 364 Gene3D G3DSA:3.30.1330.30 115 194 4.6E-5 T 18-10-2018 IPR029064 50S ribosomal protein L30e-like CH53_2763 bdde2334e206649b9b2ac5138807a023 364 SUPERFAMILY SSF55315 119 196 9.77E-10 T 18-10-2018 IPR029064 50S ribosomal protein L30e-like CH53_2763 bdde2334e206649b9b2ac5138807a023 364 Gene3D G3DSA:3.40.1280.10 195 364 5.5E-41 T 18-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH53_2763 bdde2334e206649b9b2ac5138807a023 364 SMART SM00967 126 201 1.0E-8 T 18-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CH53_2763 bdde2334e206649b9b2ac5138807a023 364 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 127 199 7.0E-12 T 18-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CH53_2763 bdde2334e206649b9b2ac5138807a023 364 SUPERFAMILY SSF75217 210 361 4.97E-40 T 18-10-2018 IPR029028 Alpha/beta knot methyltransferases CH53_2763 bdde2334e206649b9b2ac5138807a023 364 Pfam PF00588 SpoU rRNA Methylase family 217 354 6.3E-31 T 18-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 PIRSF PIRSF000770 7 285 2.8E-33 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 Pfam PF04545 Sigma-70, region 4 229 280 3.2E-16 T 18-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 Pfam PF00140 Sigma-70 factor, region 1.2 15 40 4.4E-7 T 18-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 Gene3D G3DSA:1.20.120.1810 2 122 8.5E-27 T 18-10-2018 CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 Gene3D G3DSA:1.10.10.10 214 284 2.9E-16 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 54.347 T 18-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 Pfam PF04542 Sigma-70 region 2 53 122 3.3E-16 T 18-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 SUPERFAMILY SSF88659 200 284 5.42E-19 T 18-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 284 5.4E-130 T 18-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 SUPERFAMILY SSF88946 12 122 2.98E-39 T 18-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 3.9E-19 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 PRINTS PR00046 Major sigma-70 factor signature 253 268 3.9E-19 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 3.9E-19 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 PRINTS PR00046 Major sigma-70 factor signature 268 279 3.9E-19 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_2031 9df2f27d65525c2bc6c425a7507b8adc 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 280 5.9E-35 T 18-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CH53_752 75dbc48c3a7e2b348f8e88aba08a4283 134 Pfam PF07972 NrdI Flavodoxin like 5 123 1.8E-47 T 18-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI CH53_752 75dbc48c3a7e2b348f8e88aba08a4283 134 Gene3D G3DSA:3.40.50.360 3 134 6.7E-46 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_752 75dbc48c3a7e2b348f8e88aba08a4283 134 TIGRFAM TIGR00333 nrdI: nrdI protein 5 132 3.5E-51 T 18-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI CH53_752 75dbc48c3a7e2b348f8e88aba08a4283 134 PIRSF PIRSF005087 1 134 4.8E-54 T 18-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI CH53_752 75dbc48c3a7e2b348f8e88aba08a4283 134 SUPERFAMILY SSF52218 1 132 1.54E-23 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_752 75dbc48c3a7e2b348f8e88aba08a4283 134 Hamap MF_00128 Protein NrdI [nrdI]. 3 133 35.433 T 18-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial CH53_2296 816dc5c0dd56e7bacb97236452719c2d 265 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 1.5E-22 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_2296 816dc5c0dd56e7bacb97236452719c2d 265 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 3.1E-8 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_2296 816dc5c0dd56e7bacb97236452719c2d 265 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 3.1E-8 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_2296 816dc5c0dd56e7bacb97236452719c2d 265 Gene3D G3DSA:1.10.10.10 3 82 3.9E-23 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2296 816dc5c0dd56e7bacb97236452719c2d 265 SUPERFAMILY SSF46785 2 76 4.95E-22 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2296 816dc5c0dd56e7bacb97236452719c2d 265 SUPERFAMILY SSF48008 94 227 1.41E-20 T 18-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CH53_2296 816dc5c0dd56e7bacb97236452719c2d 265 SMART SM00895 96 220 2.7E-15 T 18-10-2018 IPR011711 GntR, C-terminal CH53_2296 816dc5c0dd56e7bacb97236452719c2d 265 Gene3D G3DSA:1.20.120.530 83 229 3.6E-20 T 18-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CH53_2296 816dc5c0dd56e7bacb97236452719c2d 265 Pfam PF07729 FCD domain 96 219 9.0E-18 T 18-10-2018 IPR011711 GntR, C-terminal CH53_2296 816dc5c0dd56e7bacb97236452719c2d 265 SMART SM00345 13 72 2.7E-25 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1367 0c9a64207fb5bab941a95fbdb8713658 478 SUPERFAMILY SSF48557 2 458 1.41E-142 T 18-10-2018 IPR008948 L-Aspartase-like GO:0003824 CH53_1367 0c9a64207fb5bab941a95fbdb8713658 478 Gene3D G3DSA:1.10.275.10 6 142 9.8E-59 T 18-10-2018 IPR024083 Fumarase/histidase, N-terminal CH53_1367 0c9a64207fb5bab941a95fbdb8713658 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 3.9E-5 T 18-10-2018 CH53_1367 0c9a64207fb5bab941a95fbdb8713658 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 3.9E-5 T 18-10-2018 CH53_1367 0c9a64207fb5bab941a95fbdb8713658 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 3.9E-5 T 18-10-2018 CH53_1367 0c9a64207fb5bab941a95fbdb8713658 478 Pfam PF10415 Fumarase C C-terminus 411 464 4.1E-17 T 18-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CH53_1367 0c9a64207fb5bab941a95fbdb8713658 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 5.2E-27 T 18-10-2018 IPR000362 Fumarate lyase family CH53_1367 0c9a64207fb5bab941a95fbdb8713658 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 5.2E-27 T 18-10-2018 IPR000362 Fumarate lyase family CH53_1367 0c9a64207fb5bab941a95fbdb8713658 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 5.2E-27 T 18-10-2018 IPR000362 Fumarate lyase family CH53_1367 0c9a64207fb5bab941a95fbdb8713658 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 5.2E-27 T 18-10-2018 IPR000362 Fumarate lyase family CH53_1367 0c9a64207fb5bab941a95fbdb8713658 478 Gene3D G3DSA:1.20.200.10 143 410 1.4E-114 T 18-10-2018 CH53_1367 0c9a64207fb5bab941a95fbdb8713658 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 1.2E-265 T 18-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 CH53_1367 0c9a64207fb5bab941a95fbdb8713658 478 Gene3D G3DSA:1.10.40.30 411 460 2.4E-29 T 18-10-2018 CH53_1367 0c9a64207fb5bab941a95fbdb8713658 478 Pfam PF00206 Lyase 13 345 1.2E-108 T 18-10-2018 IPR022761 Fumarate lyase, N-terminal CH53_1367 0c9a64207fb5bab941a95fbdb8713658 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 18-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CH53_1663 4530eb26b398a6f5e35bfc2d22f70a5d 510 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 502 8.4E-265 T 18-10-2018 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 CH53_1663 4530eb26b398a6f5e35bfc2d22f70a5d 510 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1663 4530eb26b398a6f5e35bfc2d22f70a5d 510 SUPERFAMILY SSF52540 3 229 2.56E-52 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1663 4530eb26b398a6f5e35bfc2d22f70a5d 510 Pfam PF00005 ABC transporter 20 171 5.5E-29 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1663 4530eb26b398a6f5e35bfc2d22f70a5d 510 Gene3D G3DSA:3.40.50.300 3 240 1.1E-52 T 18-10-2018 CH53_1663 4530eb26b398a6f5e35bfc2d22f70a5d 510 Gene3D G3DSA:3.40.50.300 256 509 9.7E-45 T 18-10-2018 CH53_1663 4530eb26b398a6f5e35bfc2d22f70a5d 510 SUPERFAMILY SSF52540 242 485 1.14E-46 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1663 4530eb26b398a6f5e35bfc2d22f70a5d 510 Pfam PF00005 ABC transporter 278 433 2.9E-19 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1663 4530eb26b398a6f5e35bfc2d22f70a5d 510 SMART SM00382 29 219 9.7E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1663 4530eb26b398a6f5e35bfc2d22f70a5d 510 SMART SM00382 286 482 2.4E-7 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_605 21c632c3d38448fd46d12877955ea65f 459 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 18-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CH53_605 21c632c3d38448fd46d12877955ea65f 459 Pfam PF16325 Peptidase family U32 C-terminal domain 364 445 1.4E-19 T 18-10-2018 IPR032525 Peptidase family U32, C-terminal CH53_605 21c632c3d38448fd46d12877955ea65f 459 Gene3D G3DSA:2.40.30.10 360 446 1.9E-9 T 18-10-2018 CH53_605 21c632c3d38448fd46d12877955ea65f 459 Pfam PF01136 Peptidase family U32 81 348 2.3E-95 T 18-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 93 319 4.2E-35 T 18-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 Gene3D G3DSA:1.10.601.10 86 168 5.5E-46 T 18-10-2018 CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 Pfam PF04545 Sigma-70, region 4 264 317 2.7E-15 T 18-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 Gene3D G3DSA:1.10.10.10 169 244 5.7E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 289 315 - T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 120 133 - T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 12 330 39.935 T 18-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 Pfam PF04539 Sigma-70 region 3 176 250 2.5E-20 T 18-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 SUPERFAMILY SSF88659 169 243 8.72E-15 T 18-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 Gene3D G3DSA:1.10.10.10 246 322 1.0E-19 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 SUPERFAMILY SSF88946 58 166 1.96E-45 T 18-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 50 330 3.6E-144 T 18-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 PRINTS PR00046 Major sigma-70 factor signature 268 280 2.5E-27 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 PRINTS PR00046 Major sigma-70 factor signature 304 315 2.5E-27 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 PRINTS PR00046 Major sigma-70 factor signature 289 304 2.5E-27 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 PRINTS PR00046 Major sigma-70 factor signature 120 133 2.5E-27 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 PRINTS PR00046 Major sigma-70 factor signature 144 152 2.5E-27 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 Pfam PF04542 Sigma-70 region 2 96 165 3.2E-21 T 18-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 SUPERFAMILY SSF88659 227 324 1.68E-23 T 18-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CH53_924 dce3ff09c5e2389f4b215b274cd143c9 332 Pfam PF00140 Sigma-70 factor, region 1.2 58 89 5.1E-11 T 18-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CH53_1032 aa1219bc70a04a2cd23a8e67beba7999 599 Pfam PF00501 AMP-binding enzyme 15 468 3.8E-93 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CH53_1032 aa1219bc70a04a2cd23a8e67beba7999 599 Gene3D G3DSA:3.40.50.12780 2 322 1.0E-54 T 18-10-2018 CH53_1032 aa1219bc70a04a2cd23a8e67beba7999 599 SUPERFAMILY SSF56801 9 597 1.31E-112 T 18-10-2018 CH53_1032 aa1219bc70a04a2cd23a8e67beba7999 599 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 18-10-2018 IPR020845 AMP-binding, conserved site CH53_1032 aa1219bc70a04a2cd23a8e67beba7999 599 Gene3D G3DSA:3.40.50.12780 323 459 4.5E-34 T 18-10-2018 CH53_4004 d5abe84407339d46494dfcfa8a470366 815 Pfam PF10139 Putative bacterial virulence factor 24 454 2.8E-134 T 18-10-2018 IPR017030 Virulence effector, SrfC CH53_4004 d5abe84407339d46494dfcfa8a470366 815 Pfam PF10139 Putative bacterial virulence factor 464 805 2.5E-66 T 18-10-2018 IPR017030 Virulence effector, SrfC CH53_4004 d5abe84407339d46494dfcfa8a470366 815 PIRSF PIRSF034586 456 813 1.3E-122 T 18-10-2018 IPR017030 Virulence effector, SrfC CH53_4004 d5abe84407339d46494dfcfa8a470366 815 PIRSF PIRSF034586 1 459 3.0E-180 T 18-10-2018 IPR017030 Virulence effector, SrfC CH53_110 47c5b97e98d7557842697436bea72192 684 Pfam PF13361 UvrD-like helicase C-terminal domain 587 659 3.7E-13 T 18-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CH53_110 47c5b97e98d7557842697436bea72192 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 6.0E-64 T 18-10-2018 IPR022161 DNA helicase IV, N-terminal domain CH53_110 47c5b97e98d7557842697436bea72192 684 Gene3D G3DSA:3.40.50.300 189 339 1.1E-28 T 18-10-2018 CH53_110 47c5b97e98d7557842697436bea72192 684 Gene3D G3DSA:3.40.50.300 345 499 1.2E-21 T 18-10-2018 CH53_110 47c5b97e98d7557842697436bea72192 684 SUPERFAMILY SSF52540 195 675 5.95E-84 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_110 47c5b97e98d7557842697436bea72192 684 Gene3D G3DSA:3.40.50.300 500 676 1.9E-25 T 18-10-2018 CH53_110 47c5b97e98d7557842697436bea72192 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 490 1.0E-40 T 18-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CH53_761 56ad92353535fd9bfbac602311b46555 753 Pfam PF11924 Inverse autotransporter, beta-domain 137 409 1.2E-106 T 18-10-2018 IPR024519 Inverse autotransporter, beta-domain CH53_761 56ad92353535fd9bfbac602311b46555 753 Gene3D G3DSA:3.10.350.10 30 88 1.6E-6 T 18-10-2018 IPR036779 LysM domain superfamily CH53_761 56ad92353535fd9bfbac602311b46555 753 SMART SM00257 38 84 0.0013 T 18-10-2018 IPR018392 LysM domain CH53_761 56ad92353535fd9bfbac602311b46555 753 Gene3D G3DSA:2.40.160.160 172 416 9.7E-104 T 18-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily CH53_761 56ad92353535fd9bfbac602311b46555 753 PRINTS PR01369 Intimin signature 289 308 1.8E-6 T 18-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CH53_761 56ad92353535fd9bfbac602311b46555 753 PRINTS PR01369 Intimin signature 445 457 1.8E-6 T 18-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CH53_761 56ad92353535fd9bfbac602311b46555 753 PRINTS PR01369 Intimin signature 261 276 1.8E-6 T 18-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CH53_2972 60a927e0b32bbe3e834ab652cfca32a0 305 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 147 159 - T 18-10-2018 IPR033140 Lipase, GDXG, putative serine active site CH53_2972 60a927e0b32bbe3e834ab652cfca32a0 305 Gene3D G3DSA:3.40.50.1820 1 300 9.1E-76 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2972 60a927e0b32bbe3e834ab652cfca32a0 305 Pfam PF07859 alpha/beta hydrolase fold 75 280 1.0E-61 T 18-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 CH53_2972 60a927e0b32bbe3e834ab652cfca32a0 305 SUPERFAMILY SSF53474 23 295 2.26E-59 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_629 a8681073947a55a6f09bd4c6b2f44a30 376 Gene3D G3DSA:3.20.20.20 1 263 2.7E-102 T 18-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_629 a8681073947a55a6f09bd4c6b2f44a30 376 Pfam PF04551 GcpE protein 13 356 4.0E-129 T 18-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CH53_629 a8681073947a55a6f09bd4c6b2f44a30 376 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 361 34.215 T 18-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CH53_629 a8681073947a55a6f09bd4c6b2f44a30 376 SUPERFAMILY SSF56014 268 356 4.06E-11 T 18-10-2018 CH53_629 a8681073947a55a6f09bd4c6b2f44a30 376 Gene3D G3DSA:3.30.413.10 264 363 2.2E-22 T 18-10-2018 CH53_629 a8681073947a55a6f09bd4c6b2f44a30 376 SUPERFAMILY SSF51604 40 141 1.73E-5 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CH53_629 a8681073947a55a6f09bd4c6b2f44a30 376 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 354 6.9E-124 T 18-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CH53_629 a8681073947a55a6f09bd4c6b2f44a30 376 PIRSF PIRSF004640 1 366 6.1E-143 T 18-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CH53_3019 93b57826635aa67b0ef133eeca0e59b0 300 Gene3D G3DSA:1.10.10.10 3 89 1.4E-26 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3019 93b57826635aa67b0ef133eeca0e59b0 300 Pfam PF03466 LysR substrate binding domain 89 285 5.7E-44 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_3019 93b57826635aa67b0ef133eeca0e59b0 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.8E-5 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3019 93b57826635aa67b0ef133eeca0e59b0 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.8E-5 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3019 93b57826635aa67b0ef133eeca0e59b0 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.8E-5 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3019 93b57826635aa67b0ef133eeca0e59b0 300 SUPERFAMILY SSF46785 6 111 5.59E-23 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3019 93b57826635aa67b0ef133eeca0e59b0 300 SUPERFAMILY SSF53850 89 290 1.09E-46 T 18-10-2018 CH53_3019 93b57826635aa67b0ef133eeca0e59b0 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.3E-19 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3019 93b57826635aa67b0ef133eeca0e59b0 300 Gene3D G3DSA:3.40.190.10 162 258 3.8E-64 T 18-10-2018 CH53_3019 93b57826635aa67b0ef133eeca0e59b0 300 Gene3D G3DSA:3.40.190.10 91 285 3.8E-64 T 18-10-2018 CH53_2916 3bf37559ad630e624799bb5a42784434 563 Gene3D G3DSA:1.20.1530.20 6 397 8.5E-79 T 18-10-2018 IPR038770 Sodium/solute symporter superfamily CH53_2916 3bf37559ad630e624799bb5a42784434 563 SUPERFAMILY SSF51735 418 547 5.65E-26 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2916 3bf37559ad630e624799bb5a42784434 563 Gene3D G3DSA:3.40.50.720 413 550 1.3E-26 T 18-10-2018 CH53_2916 3bf37559ad630e624799bb5a42784434 563 Pfam PF02254 TrkA-N domain 421 534 4.9E-21 T 18-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CH53_2916 3bf37559ad630e624799bb5a42784434 563 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 1.1E-78 T 18-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CH53_2916 3bf37559ad630e624799bb5a42784434 563 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 1.5E-81 T 18-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CH53_2265 322df837e46b6a6d9c342c7aaa5642ef 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 4.7E-18 T 18-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CH53_2265 322df837e46b6a6d9c342c7aaa5642ef 213 Gene3D G3DSA:1.20.1050.10 89 193 9.7E-80 T 18-10-2018 CH53_2265 322df837e46b6a6d9c342c7aaa5642ef 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 101 194 6.6E-12 T 18-10-2018 IPR004046 Glutathione S-transferase, C-terminal CH53_2265 322df837e46b6a6d9c342c7aaa5642ef 213 SUPERFAMILY SSF52833 7 90 3.02E-22 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_2265 322df837e46b6a6d9c342c7aaa5642ef 213 SUPERFAMILY SSF47616 82 208 3.13E-26 T 18-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CH53_2265 322df837e46b6a6d9c342c7aaa5642ef 213 Gene3D G3DSA:3.40.30.10 12 200 9.7E-80 T 18-10-2018 CH53_3173 5b8becc11e45a38fa088b2cdf662d009 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 2.1E-66 T 18-10-2018 IPR016040 NAD(P)-binding domain CH53_3173 5b8becc11e45a38fa088b2cdf662d009 338 SUPERFAMILY SSF51735 1 336 1.08E-100 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3173 5b8becc11e45a38fa088b2cdf662d009 338 Gene3D G3DSA:3.40.50.720 3 262 3.8E-143 T 18-10-2018 CH53_3173 5b8becc11e45a38fa088b2cdf662d009 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 335 1.1E-144 T 18-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 CH53_3173 5b8becc11e45a38fa088b2cdf662d009 338 Gene3D G3DSA:3.90.25.10 182 328 3.8E-143 T 18-10-2018 CH53_2811 737d9dba646130b8e52eb3a7aa0e4eb2 162 Gene3D G3DSA:3.40.630.30 1 158 1.1E-35 T 18-10-2018 CH53_2811 737d9dba646130b8e52eb3a7aa0e4eb2 162 Pfam PF00583 Acetyltransferase (GNAT) family 60 147 5.9E-14 T 18-10-2018 IPR000182 GNAT domain CH53_2811 737d9dba646130b8e52eb3a7aa0e4eb2 162 SUPERFAMILY SSF55729 1 152 6.48E-25 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_1786 17be31bc014c281dc6721597dfb0fbd5 139 Gene3D G3DSA:3.40.1650.10 8 136 5.2E-38 T 18-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CH53_1786 17be31bc014c281dc6721597dfb0fbd5 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.308 T 18-10-2018 IPR023064 D-ribose pyranase GO:0016872 CH53_1786 17be31bc014c281dc6721597dfb0fbd5 139 SUPERFAMILY SSF102546 1 139 8.5E-45 T 18-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CH53_1786 17be31bc014c281dc6721597dfb0fbd5 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 1.2E-49 T 18-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CH53_2449 e33c2f0383bf90626aecfd35c639b425 238 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 26 150 5.2E-34 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_2449 e33c2f0383bf90626aecfd35c639b425 238 SUPERFAMILY SSF49354 21 150 5.23E-34 T 18-10-2018 IPR008962 PapD-like superfamily CH53_2449 e33c2f0383bf90626aecfd35c639b425 238 Gene3D G3DSA:2.60.40.10 27 148 5.8E-36 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2449 e33c2f0383bf90626aecfd35c639b425 238 Gene3D G3DSA:2.60.40.10 152 235 3.6E-21 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2449 e33c2f0383bf90626aecfd35c639b425 238 PRINTS PR00969 Pili chaperone signature 100 117 2.8E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2449 e33c2f0383bf90626aecfd35c639b425 238 PRINTS PR00969 Pili chaperone signature 26 35 2.8E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2449 e33c2f0383bf90626aecfd35c639b425 238 PRINTS PR00969 Pili chaperone signature 132 147 2.8E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2449 e33c2f0383bf90626aecfd35c639b425 238 PRINTS PR00969 Pili chaperone signature 72 93 2.8E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2449 e33c2f0383bf90626aecfd35c639b425 238 PRINTS PR00969 Pili chaperone signature 167 182 2.8E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2449 e33c2f0383bf90626aecfd35c639b425 238 SUPERFAMILY SSF49584 155 233 1.01E-20 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_2449 e33c2f0383bf90626aecfd35c639b425 238 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 172 231 3.2E-18 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_2709 f23e0af5dd34b98b193fd69a5f0a6652 250 SMART SM00475 3 250 7.3E-95 T 18-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CH53_2709 f23e0af5dd34b98b193fd69a5f0a6652 250 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 250 43.7 T 18-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 CH53_2709 f23e0af5dd34b98b193fd69a5f0a6652 250 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 159 7.9E-32 T 18-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CH53_2709 f23e0af5dd34b98b193fd69a5f0a6652 250 SMART SM00279 162 197 3.2E-9 T 18-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CH53_2709 f23e0af5dd34b98b193fd69a5f0a6652 250 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 249 5.0E-25 T 18-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 CH53_2709 f23e0af5dd34b98b193fd69a5f0a6652 250 SUPERFAMILY SSF88723 4 159 5.4E-41 T 18-10-2018 IPR029060 PIN-like domain superfamily CH53_2709 f23e0af5dd34b98b193fd69a5f0a6652 250 Gene3D G3DSA:1.10.150.20 162 250 4.0E-28 T 18-10-2018 CH53_2709 f23e0af5dd34b98b193fd69a5f0a6652 250 SUPERFAMILY SSF47807 160 244 1.94E-22 T 18-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CH53_2709 f23e0af5dd34b98b193fd69a5f0a6652 250 Gene3D G3DSA:3.40.50.1010 1 161 3.1E-59 T 18-10-2018 CH53_534 e6e74f4e86ea97d455311043ef458526 736 Pfam PF05159 Capsule polysaccharide biosynthesis protein 455 572 1.1E-6 T 18-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 CH53_534 e6e74f4e86ea97d455311043ef458526 736 Pfam PF10111 Glycosyltransferase like family 2 9 262 2.0E-30 T 18-10-2018 IPR019290 Glycosyltransferase 2-like, prokaryotic type CH53_534 e6e74f4e86ea97d455311043ef458526 736 SUPERFAMILY SSF53448 7 234 6.0E-25 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_534 e6e74f4e86ea97d455311043ef458526 736 Gene3D G3DSA:3.90.550.10 2 232 2.3E-22 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_1094 a1e641aeab6081e5efae117ffc0cfa63 639 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 495 523 - T 18-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CH53_1094 a1e641aeab6081e5efae117ffc0cfa63 639 SUPERFAMILY SSF53955 473 635 2.72E-50 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily CH53_1094 a1e641aeab6081e5efae117ffc0cfa63 639 Gene3D G3DSA:1.10.530.10 467 639 3.9E-52 T 18-10-2018 CH53_1094 a1e641aeab6081e5efae117ffc0cfa63 639 SUPERFAMILY SSF48435 23 471 2.09E-137 T 18-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 CH53_1094 a1e641aeab6081e5efae117ffc0cfa63 639 Gene3D G3DSA:1.10.1240.20 397 466 1.0E-27 T 18-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 CH53_1094 a1e641aeab6081e5efae117ffc0cfa63 639 Pfam PF14718 Soluble lytic murein transglycosylase L domain 400 466 1.3E-24 T 18-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 CH53_1094 a1e641aeab6081e5efae117ffc0cfa63 639 Gene3D G3DSA:1.25.20.10 23 384 1.9E-119 T 18-10-2018 CH53_1094 a1e641aeab6081e5efae117ffc0cfa63 639 Pfam PF01464 Transglycosylase SLT domain 478 590 6.6E-33 T 18-10-2018 IPR008258 Transglycosylase SLT domain 1 CH53_233 af5326af767a36470b9ee811562b7a90 312 SUPERFAMILY SSF53613 7 290 1.22E-65 T 18-10-2018 IPR029056 Ribokinase-like CH53_233 af5326af767a36470b9ee811562b7a90 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 18-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CH53_233 af5326af767a36470b9ee811562b7a90 312 PIRSF PIRSF000535 2 311 3.2E-114 T 18-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CH53_233 af5326af767a36470b9ee811562b7a90 312 Gene3D G3DSA:3.40.1190.20 2 310 2.7E-90 T 18-10-2018 IPR029056 Ribokinase-like CH53_233 af5326af767a36470b9ee811562b7a90 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 2.0E-98 T 18-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CH53_233 af5326af767a36470b9ee811562b7a90 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 4.6E-100 T 18-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 CH53_233 af5326af767a36470b9ee811562b7a90 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 18-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CH53_233 af5326af767a36470b9ee811562b7a90 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 6.4E-63 T 18-10-2018 IPR011611 Carbohydrate kinase PfkB CH53_3315 3e1569cabfdf760d0448c4d3901e0673 211 SUPERFAMILY SSF51695 1 184 3.4E-10 T 18-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CH53_3333 11901afdb20c87d7669b72dfdaaa8dfb 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 18-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 CH53_3333 11901afdb20c87d7669b72dfdaaa8dfb 299 Pfam PF08029 HisG, C-terminal domain 223 296 3.3E-24 T 18-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CH53_3333 11901afdb20c87d7669b72dfdaaa8dfb 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.245 T 18-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 CH53_3333 11901afdb20c87d7669b72dfdaaa8dfb 299 SUPERFAMILY SSF54913 226 298 1.22E-21 T 18-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CH53_3333 11901afdb20c87d7669b72dfdaaa8dfb 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 2.4E-47 T 18-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CH53_3333 11901afdb20c87d7669b72dfdaaa8dfb 299 Gene3D G3DSA:3.40.190.10 7 221 1.2E-73 T 18-10-2018 CH53_3333 11901afdb20c87d7669b72dfdaaa8dfb 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 298 4.9E-33 T 18-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CH53_3333 11901afdb20c87d7669b72dfdaaa8dfb 299 Gene3D G3DSA:3.30.70.120 226 299 6.6E-35 T 18-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CH53_3333 11901afdb20c87d7669b72dfdaaa8dfb 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 9.0E-56 T 18-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CH53_3333 11901afdb20c87d7669b72dfdaaa8dfb 299 SUPERFAMILY SSF53850 6 224 1.09E-69 T 18-10-2018 CH53_3333 11901afdb20c87d7669b72dfdaaa8dfb 299 Gene3D G3DSA:3.40.190.10 103 192 1.2E-73 T 18-10-2018 CH53_3512 3b59fdeba08e8f332dbaca0b142eb748 866 Gene3D G3DSA:3.10.20.410 44 168 2.0E-24 T 18-10-2018 CH53_3512 3b59fdeba08e8f332dbaca0b142eb748 866 Pfam PF00577 Outer membrane usher protein 207 776 4.2E-162 T 18-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 CH53_3512 3b59fdeba08e8f332dbaca0b142eb748 866 Pfam PF13953 PapC C-terminal domain 785 849 6.6E-18 T 18-10-2018 IPR025949 PapC-like, C-terminal domain CH53_3512 3b59fdeba08e8f332dbaca0b142eb748 866 Gene3D G3DSA:2.60.40.2610 691 781 4.2E-31 T 18-10-2018 CH53_3512 3b59fdeba08e8f332dbaca0b142eb748 866 SUPERFAMILY SSF141729 64 182 1.57E-28 T 18-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 CH53_3512 3b59fdeba08e8f332dbaca0b142eb748 866 Pfam PF13954 PapC N-terminal domain 46 190 4.9E-36 T 18-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 CH53_3512 3b59fdeba08e8f332dbaca0b142eb748 866 Gene3D G3DSA:2.60.40.3110 276 365 6.8E-37 T 18-10-2018 CH53_3512 3b59fdeba08e8f332dbaca0b142eb748 866 Gene3D G3DSA:2.60.40.2070 783 866 2.0E-14 T 18-10-2018 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 Hamap MF_01201 Alanine racemase. 1 357 33.947 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 SUPERFAMILY SSF50621 227 358 8.02E-43 T 18-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 18-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 TIGRFAM TIGR00492 alr: alanine racemase 3 357 5.6E-134 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 Gene3D G3DSA:2.40.37.10 8 352 2.8E-130 T 18-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 Gene3D G3DSA:3.20.20.10 10 217 2.8E-130 T 18-10-2018 IPR029066 PLP-binding barrel CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 SUPERFAMILY SSF51419 8 234 1.13E-71 T 18-10-2018 IPR029066 PLP-binding barrel CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 SMART SM01005 233 357 1.2E-58 T 18-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 PRINTS PR00992 Alanine racemase signature 339 352 1.5E-70 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 PRINTS PR00992 Alanine racemase signature 249 264 1.5E-70 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 PRINTS PR00992 Alanine racemase signature 155 166 1.5E-70 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 PRINTS PR00992 Alanine racemase signature 192 219 1.5E-70 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 PRINTS PR00992 Alanine racemase signature 287 304 1.5E-70 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 PRINTS PR00992 Alanine racemase signature 60 78 1.5E-70 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 PRINTS PR00992 Alanine racemase signature 120 132 1.5E-70 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 PRINTS PR00992 Alanine racemase signature 266 281 1.5E-70 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 PRINTS PR00992 Alanine racemase signature 26 42 1.5E-70 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 4.0E-38 T 18-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_2158 1ef1204a993e26bd435491677b9eedc2 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 3.0E-71 T 18-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_805 cfa3bab87254960d2cc238d6f092d9af 115 Pfam PF01245 Ribosomal protein L19 3 113 1.2E-49 T 18-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_805 cfa3bab87254960d2cc238d6f092d9af 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 18-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_805 cfa3bab87254960d2cc238d6f092d9af 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 18-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_805 cfa3bab87254960d2cc238d6f092d9af 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 18-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_805 cfa3bab87254960d2cc238d6f092d9af 115 Gene3D G3DSA:2.30.30.790 2 115 3.1E-16 T 18-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_805 cfa3bab87254960d2cc238d6f092d9af 115 PIRSF PIRSF002191 1 115 1.6E-49 T 18-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_805 cfa3bab87254960d2cc238d6f092d9af 115 SUPERFAMILY SSF50104 2 114 2.61E-47 T 18-10-2018 IPR008991 Translation protein SH3-like domain superfamily CH53_805 cfa3bab87254960d2cc238d6f092d9af 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.023 T 18-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_805 cfa3bab87254960d2cc238d6f092d9af 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 18-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_805 cfa3bab87254960d2cc238d6f092d9af 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 2.8E-52 T 18-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_3564 d4243730baf6a2d7a243164e6bcc9945 279 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 251 276 2.2E-67 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_3564 d4243730baf6a2d7a243164e6bcc9945 279 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 227 248 2.2E-67 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_3564 d4243730baf6a2d7a243164e6bcc9945 279 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 118 137 2.2E-67 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_3564 d4243730baf6a2d7a243164e6bcc9945 279 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 79 98 2.2E-67 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_3564 d4243730baf6a2d7a243164e6bcc9945 279 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 98 118 2.2E-67 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_3564 d4243730baf6a2d7a243164e6bcc9945 279 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 206 226 2.2E-67 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_3564 d4243730baf6a2d7a243164e6bcc9945 279 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 137 149 1.1E-31 T 18-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CH53_3564 d4243730baf6a2d7a243164e6bcc9945 279 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 267 277 1.1E-31 T 18-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CH53_3564 d4243730baf6a2d7a243164e6bcc9945 279 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 77 86 1.1E-31 T 18-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CH53_3564 d4243730baf6a2d7a243164e6bcc9945 279 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 177 189 1.1E-31 T 18-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CH53_3564 d4243730baf6a2d7a243164e6bcc9945 279 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 199 211 1.1E-31 T 18-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CH53_3564 d4243730baf6a2d7a243164e6bcc9945 279 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 149 163 1.1E-31 T 18-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CH53_3564 d4243730baf6a2d7a243164e6bcc9945 279 Pfam PF00813 FliP family 82 273 2.9E-77 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_3564 d4243730baf6a2d7a243164e6bcc9945 279 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 81 277 7.5E-93 T 18-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CH53_3564 d4243730baf6a2d7a243164e6bcc9945 279 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 206 221 - T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_3564 d4243730baf6a2d7a243164e6bcc9945 279 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 254 266 - T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CH53_3678 970e86c8f82a0f67a47c646acac7b049 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 2.3E-57 T 18-10-2018 CH53_3678 970e86c8f82a0f67a47c646acac7b049 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 8.6E-58 T 18-10-2018 IPR000150 Cof family GO:0016787 CH53_3678 970e86c8f82a0f67a47c646acac7b049 270 Gene3D G3DSA:3.30.1240.10 83 189 1.6E-78 T 18-10-2018 CH53_3678 970e86c8f82a0f67a47c646acac7b049 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 232 2.1E-20 T 18-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CH53_3678 970e86c8f82a0f67a47c646acac7b049 270 Gene3D G3DSA:3.40.50.1000 6 259 1.6E-78 T 18-10-2018 IPR023214 HAD superfamily CH53_3678 970e86c8f82a0f67a47c646acac7b049 270 SUPERFAMILY SSF56784 1 264 1.07E-66 T 18-10-2018 IPR036412 HAD-like superfamily CH53_3678 970e86c8f82a0f67a47c646acac7b049 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 18-10-2018 CH53_2764 631a3188cb344b1cdcb3ee0c81b18370 510 Gene3D G3DSA:1.20.1720.10 14 219 1.2E-46 T 18-10-2018 CH53_2764 631a3188cb344b1cdcb3ee0c81b18370 510 Pfam PF07690 Major Facilitator Superfamily 18 412 2.7E-54 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_2764 631a3188cb344b1cdcb3ee0c81b18370 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 6.9E-5 T 18-10-2018 CH53_2764 631a3188cb344b1cdcb3ee0c81b18370 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 6.9E-5 T 18-10-2018 CH53_2764 631a3188cb344b1cdcb3ee0c81b18370 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 204 222 6.9E-5 T 18-10-2018 CH53_2764 631a3188cb344b1cdcb3ee0c81b18370 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 6.9E-5 T 18-10-2018 CH53_2764 631a3188cb344b1cdcb3ee0c81b18370 510 SUPERFAMILY SSF103473 8 499 1.27E-73 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_2764 631a3188cb344b1cdcb3ee0c81b18370 510 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 497 1.7E-209 T 18-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CH53_983 8f99cf99103219fb7aaa42e9b34899ed 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 4.3E-74 T 18-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 CH53_983 8f99cf99103219fb7aaa42e9b34899ed 178 Gene3D G3DSA:3.40.50.2020 1 176 5.2E-66 T 18-10-2018 CH53_983 8f99cf99103219fb7aaa42e9b34899ed 178 SUPERFAMILY SSF53271 3 173 4.33E-55 T 18-10-2018 IPR029057 Phosphoribosyltransferase-like CH53_983 8f99cf99103219fb7aaa42e9b34899ed 178 Pfam PF00156 Phosphoribosyl transferase domain 12 160 2.6E-25 T 18-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 SUPERFAMILY SSF82693 136 324 1.88E-21 T 18-10-2018 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 Gene3D G3DSA:3.30.70.1320 135 326 1.3E-292 T 18-10-2018 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 Gene3D G3DSA:3.30.70.1430 557 649 1.3E-292 T 18-10-2018 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 Gene3D G3DSA:1.20.1640.10 503 1005 1.3E-292 T 18-10-2018 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 SUPERFAMILY SSF82693 40 135 4.19E-23 T 18-10-2018 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 Gene3D G3DSA:3.30.70.1440 650 847 1.3E-292 T 18-10-2018 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 Gene3D G3DSA:1.20.1640.10 10 502 1.3E-292 T 18-10-2018 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.8E-85 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-85 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-85 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 3.8E-85 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 3.8E-85 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.8E-85 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.8E-85 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.8E-85 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.8E-85 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 SUPERFAMILY SSF82714 183 265 1.24E-15 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 SUPERFAMILY SSF82693 555 650 3.66E-18 T 18-10-2018 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 SUPERFAMILY SSF82866 290 491 1.28E-46 T 18-10-2018 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 Gene3D G3DSA:3.30.2090.10 179 269 1.3E-292 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 SUPERFAMILY SSF82714 703 785 1.44E-15 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 SUPERFAMILY SSF82866 815 1010 3.27E-41 T 18-10-2018 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 Gene3D G3DSA:3.30.2090.10 701 789 1.3E-292 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 Gene3D G3DSA:3.30.70.1430 40 797 1.3E-292 T 18-10-2018 CH53_601 d228bbff89b8fda57d94003efb60d1e0 1024 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 27.293 T 18-10-2018 IPR023931 Multidrug resistance protein MdtC CH53_1419 c760d053584c4c3f3af6872575d5c9a3 83 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 45 83 7.2E-19 T 18-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 CH53_1419 c760d053584c4c3f3af6872575d5c9a3 83 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 27 83 2.4E-11 T 18-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 CH53_4011 e5bb6764aec59ddf64fdf14fe33600b4 215 Gene3D G3DSA:3.40.190.10 22 211 3.1E-44 T 18-10-2018 CH53_4011 e5bb6764aec59ddf64fdf14fe33600b4 215 Pfam PF03466 LysR substrate binding domain 14 213 8.3E-24 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_4011 e5bb6764aec59ddf64fdf14fe33600b4 215 Gene3D G3DSA:3.40.190.10 82 184 3.1E-44 T 18-10-2018 CH53_4011 e5bb6764aec59ddf64fdf14fe33600b4 215 SUPERFAMILY SSF53850 15 215 1.23E-28 T 18-10-2018 CH53_1278 7c9e00083616da5c2c86fd5d99eadff2 136 Pfam PF02033 Ribosome-binding factor A 7 115 4.9E-30 T 18-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CH53_1278 7c9e00083616da5c2c86fd5d99eadff2 136 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 116 25.789 T 18-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CH53_1278 7c9e00083616da5c2c86fd5d99eadff2 136 ProSitePatterns PS01319 Ribosome-binding factor A signature. 82 103 - T 18-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 CH53_1278 7c9e00083616da5c2c86fd5d99eadff2 136 SUPERFAMILY SSF89919 2 110 2.62E-31 T 18-10-2018 IPR023799 Ribosome-binding factor A domain superfamily CH53_1278 7c9e00083616da5c2c86fd5d99eadff2 136 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 121 7.8E-41 T 18-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CH53_1278 7c9e00083616da5c2c86fd5d99eadff2 136 Gene3D G3DSA:3.30.300.20 1 111 3.8E-38 T 18-10-2018 IPR015946 K homology domain-like, alpha/beta CH53_1278 7c9e00083616da5c2c86fd5d99eadff2 136 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 103 6.0E-50 T 18-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CH53_1873 9db68ea5ac4c6348af08072b737772ad 143 Pfam PF00581 Rhodanese-like domain 43 133 3.1E-17 T 18-10-2018 IPR001763 Rhodanese-like domain CH53_1873 9db68ea5ac4c6348af08072b737772ad 143 SMART SM00450 40 138 3.7E-20 T 18-10-2018 IPR001763 Rhodanese-like domain CH53_1873 9db68ea5ac4c6348af08072b737772ad 143 Gene3D G3DSA:3.40.250.10 22 141 5.4E-25 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily CH53_1873 9db68ea5ac4c6348af08072b737772ad 143 SUPERFAMILY SSF52821 15 142 9.17E-31 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily CH53_746 0aad72fc6d5437184fd1714e55589be7 343 SUPERFAMILY SSF53474 5 335 5.87E-25 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_746 0aad72fc6d5437184fd1714e55589be7 343 PIRSF PIRSF031982 3 342 7.3E-67 T 18-10-2018 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL CH53_746 0aad72fc6d5437184fd1714e55589be7 343 Pfam PF07224 Chlorophyllase 70 174 5.5E-5 T 18-10-2018 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164 CH53_3157 3ca8477914bef1b484eec64c8eba2ece 269 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 149 266 1.6E-43 T 18-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal CH53_3157 3ca8477914bef1b484eec64c8eba2ece 269 SUPERFAMILY SSF48452 158 262 4.11E-15 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_3157 3ca8477914bef1b484eec64c8eba2ece 269 Pfam PF16331 TolA binding protein trimerisation 37 110 6.8E-24 T 18-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 CH53_3157 3ca8477914bef1b484eec64c8eba2ece 269 Pfam PF13432 Tetratricopeptide repeat 156 220 7.2E-10 T 18-10-2018 CH53_3157 3ca8477914bef1b484eec64c8eba2ece 269 Gene3D G3DSA:1.20.5.110 35 113 5.7E-33 T 18-10-2018 CH53_3157 3ca8477914bef1b484eec64c8eba2ece 269 Gene3D G3DSA:1.25.40.10 149 269 8.9E-32 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_3157 3ca8477914bef1b484eec64c8eba2ece 269 Pfam PF13174 Tetratricopeptide repeat 224 256 1.8E-7 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_3157 3ca8477914bef1b484eec64c8eba2ece 269 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 6 269 20.275 T 18-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 CH53_2310 82179d4421a64fe09c2095b58dab1123 395 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 374 49.537 T 18-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 CH53_2310 82179d4421a64fe09c2095b58dab1123 395 Gene3D G3DSA:3.40.50.150 8 182 5.4E-57 T 18-10-2018 CH53_2310 82179d4421a64fe09c2095b58dab1123 395 PIRSF PIRSF037565 1 375 1.3E-164 T 18-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 CH53_2310 82179d4421a64fe09c2095b58dab1123 395 Pfam PF05175 Methyltransferase small domain 200 371 2.1E-52 T 18-10-2018 IPR007848 Methyltransferase small domain GO:0008168 CH53_2310 82179d4421a64fe09c2095b58dab1123 395 Gene3D G3DSA:3.40.50.150 184 380 2.8E-48 T 18-10-2018 CH53_2310 82179d4421a64fe09c2095b58dab1123 395 SUPERFAMILY SSF53335 192 372 1.23E-22 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_2310 82179d4421a64fe09c2095b58dab1123 395 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 18-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CH53_276 15fa395f7eb068403e0689a68ba34e3c 513 SUPERFAMILY SSF55604 9 83 6.28E-21 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_276 15fa395f7eb068403e0689a68ba34e3c 513 Pfam PF00367 phosphotransferase system, EIIB 10 43 1.5E-14 T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_276 15fa395f7eb068403e0689a68ba34e3c 513 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_276 15fa395f7eb068403e0689a68ba34e3c 513 Pfam PF02378 Phosphotransferase system, EIIC 107 425 5.4E-31 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_276 15fa395f7eb068403e0689a68ba34e3c 513 Gene3D G3DSA:3.30.1360.60 2 79 9.5E-25 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_3679 429db5f68153c5550eb2286dd4d2c5f6 389 Pfam PF07690 Major Facilitator Superfamily 22 243 5.7E-15 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_3679 429db5f68153c5550eb2286dd4d2c5f6 389 Gene3D G3DSA:1.20.1250.20 207 385 1.5E-19 T 18-10-2018 CH53_3679 429db5f68153c5550eb2286dd4d2c5f6 389 SUPERFAMILY SSF103473 22 387 2.49E-39 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_3679 429db5f68153c5550eb2286dd4d2c5f6 389 Gene3D G3DSA:1.20.1250.20 19 196 8.4E-19 T 18-10-2018 CH53_3598 cfb6f0a1458580d641957866278802ba 1329 PIRSF PIRSF000197 75 1329 0.0 T 18-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CH53_3598 cfb6f0a1458580d641957866278802ba 1329 Pfam PF01619 Proline dehydrogenase 271 570 1.4E-99 T 18-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 CH53_3598 cfb6f0a1458580d641957866278802ba 1329 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 889 896 - T 18-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CH53_3598 cfb6f0a1458580d641957866278802ba 1329 Pfam PF00171 Aldehyde dehydrogenase family 667 1111 4.8E-113 T 18-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CH53_3598 cfb6f0a1458580d641957866278802ba 1329 SUPERFAMILY SSF51730 263 618 4.32E-122 T 18-10-2018 IPR029041 FAD-linked oxidoreductase-like CH53_3598 cfb6f0a1458580d641957866278802ba 1329 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 917 928 - T 18-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CH53_3598 cfb6f0a1458580d641957866278802ba 1329 Gene3D G3DSA:3.20.20.220 221 611 1.8E-160 T 18-10-2018 CH53_3598 cfb6f0a1458580d641957866278802ba 1329 Gene3D G3DSA:3.40.309.10 892 1089 9.4E-142 T 18-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CH53_3598 cfb6f0a1458580d641957866278802ba 1329 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 149 260 4.3E-45 T 18-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CH53_3598 cfb6f0a1458580d641957866278802ba 1329 SUPERFAMILY SSF81935 89 262 3.4E-65 T 18-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CH53_3598 cfb6f0a1458580d641957866278802ba 1329 Gene3D G3DSA:1.10.1220.10 11 52 4.8E-23 T 18-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CH53_3598 cfb6f0a1458580d641957866278802ba 1329 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 611 1120 2.2E-248 T 18-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CH53_3598 cfb6f0a1458580d641957866278802ba 1329 Gene3D G3DSA:1.20.5.550 88 139 1.6E-29 T 18-10-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CH53_3598 cfb6f0a1458580d641957866278802ba 1329 Gene3D G3DSA:3.40.605.10 644 1117 9.4E-142 T 18-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CH53_3598 cfb6f0a1458580d641957866278802ba 1329 SUPERFAMILY SSF53720 664 1117 7.33E-126 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CH53_3598 cfb6f0a1458580d641957866278802ba 1329 SUPERFAMILY SSF47598 4 45 7.78E-10 T 18-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 CH53_2320 fbc36d1c5fcedafa6eff2ff860e43348 132 Gene3D G3DSA:1.10.3290.10 1 132 2.9E-28 T 18-10-2018 IPR036597 Fido-like domain superfamily CH53_2320 fbc36d1c5fcedafa6eff2ff860e43348 132 SUPERFAMILY SSF140931 5 130 8.63E-26 T 18-10-2018 IPR036597 Fido-like domain superfamily CH53_2320 fbc36d1c5fcedafa6eff2ff860e43348 132 Pfam PF02661 Fic/DOC family 5 86 5.4E-13 T 18-10-2018 IPR003812 Fido domain CH53_3154 82f862bfd8e1730a576672d1a21578be 389 TIGRFAM TIGR02794 tolA_full: protein TolA 13 388 1.4E-91 T 18-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 CH53_3154 82f862bfd8e1730a576672d1a21578be 389 SUPERFAMILY SSF74653 302 389 8.44E-21 T 18-10-2018 CH53_3154 82f862bfd8e1730a576672d1a21578be 389 Pfam PF06519 TolA C-terminal 294 386 6.5E-36 T 18-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 CH53_3154 82f862bfd8e1730a576672d1a21578be 389 Gene3D G3DSA:3.30.1150.10 311 383 7.1E-35 T 18-10-2018 CH53_2867 55407b5a8ca27014cda7b37d884f2ac6 137 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 118 1.5E-27 T 18-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CH53_2867 55407b5a8ca27014cda7b37d884f2ac6 137 Gene3D G3DSA:3.10.129.10 2 135 2.3E-34 T 18-10-2018 CH53_2867 55407b5a8ca27014cda7b37d884f2ac6 137 SUPERFAMILY SSF54637 2 130 2.2E-36 T 18-10-2018 IPR029069 HotDog domain superfamily CH53_2867 55407b5a8ca27014cda7b37d884f2ac6 137 PIRSF PIRSF003230 1 135 2.7E-22 T 18-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CH53_2867 55407b5a8ca27014cda7b37d884f2ac6 137 Pfam PF03061 Thioesterase superfamily 15 95 2.4E-15 T 18-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CH53_240 1f35140f8c795b84da623d7b418dde28 157 SUPERFAMILY SSF52728 3 156 1.44E-51 T 18-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CH53_240 1f35140f8c795b84da623d7b418dde28 157 Gene3D G3DSA:3.40.35.10 1 156 1.1E-52 T 18-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CH53_240 1f35140f8c795b84da623d7b418dde28 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 5.7E-50 T 18-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CH53_240 1f35140f8c795b84da623d7b418dde28 157 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 152 1.1E-69 T 18-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CH53_44 f98e90127213eb599dbdc8ba384b6bb2 245 Gene3D G3DSA:1.10.10.10 178 243 1.4E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_44 f98e90127213eb599dbdc8ba384b6bb2 245 SUPERFAMILY SSF75516 2 163 5.49E-39 T 18-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily CH53_44 f98e90127213eb599dbdc8ba384b6bb2 245 Pfam PF03472 Autoinducer binding domain 13 157 2.4E-30 T 18-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CH53_44 f98e90127213eb599dbdc8ba384b6bb2 245 Pfam PF00196 Bacterial regulatory proteins, luxR family 181 234 1.0E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_44 f98e90127213eb599dbdc8ba384b6bb2 245 Gene3D G3DSA:3.30.450.80 1 176 1.7E-71 T 18-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily CH53_44 f98e90127213eb599dbdc8ba384b6bb2 245 SUPERFAMILY SSF46894 180 242 4.42E-14 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_44 f98e90127213eb599dbdc8ba384b6bb2 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 212 224 2.0E-9 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_44 f98e90127213eb599dbdc8ba384b6bb2 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 212 2.0E-9 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_44 f98e90127213eb599dbdc8ba384b6bb2 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 196 2.0E-9 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_44 f98e90127213eb599dbdc8ba384b6bb2 245 ProSitePatterns PS00622 LuxR-type HTH domain signature. 196 223 - T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_44 f98e90127213eb599dbdc8ba384b6bb2 245 SMART SM00421 179 236 1.8E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2687 8135d3344d96b5b4c08c6b1f6e914937 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 39.572 T 18-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CH53_2687 8135d3344d96b5b4c08c6b1f6e914937 264 SUPERFAMILY SSF55831 1 264 2.62E-129 T 18-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CH53_2687 8135d3344d96b5b4c08c6b1f6e914937 264 Pfam PF00303 Thymidylate synthase 2 264 1.3E-125 T 18-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CH53_2687 8135d3344d96b5b4c08c6b1f6e914937 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 18-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CH53_2687 8135d3344d96b5b4c08c6b1f6e914937 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 2.5E-47 T 18-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CH53_2687 8135d3344d96b5b4c08c6b1f6e914937 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 2.5E-47 T 18-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CH53_2687 8135d3344d96b5b4c08c6b1f6e914937 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.5E-47 T 18-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CH53_2687 8135d3344d96b5b4c08c6b1f6e914937 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 2.5E-47 T 18-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CH53_2687 8135d3344d96b5b4c08c6b1f6e914937 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.5E-47 T 18-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CH53_2687 8135d3344d96b5b4c08c6b1f6e914937 264 Gene3D G3DSA:3.30.572.10 1 264 1.2E-133 T 18-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CH53_2687 8135d3344d96b5b4c08c6b1f6e914937 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 7.4E-42 T 18-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CH53_2687 8135d3344d96b5b4c08c6b1f6e914937 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 1.1E-92 T 18-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CH53_3357 616c27c219cdba611d0e2a867fab08fa 338 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 176 5.2E-47 T 18-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CH53_3357 616c27c219cdba611d0e2a867fab08fa 338 Pfam PF01923 Cobalamin adenosyltransferase 3 166 5.6E-53 T 18-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CH53_3357 616c27c219cdba611d0e2a867fab08fa 338 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 157 6.0E-45 T 18-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CH53_3357 616c27c219cdba611d0e2a867fab08fa 338 Gene3D G3DSA:1.20.1200.10 12 188 1.8E-50 T 18-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CH53_3357 616c27c219cdba611d0e2a867fab08fa 338 Pfam PF03928 Haem-degrading 207 330 4.0E-26 T 18-10-2018 IPR005624 Haem-degrading CH53_3357 616c27c219cdba611d0e2a867fab08fa 338 Gene3D G3DSA:3.30.450.150 194 337 1.6E-46 T 18-10-2018 IPR038084 GlcG-like domain superfamily CH53_3357 616c27c219cdba611d0e2a867fab08fa 338 PIRSF PIRSF036411 1 335 2.7E-106 T 18-10-2018 IPR009221 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, bifunctional PduO CH53_3357 616c27c219cdba611d0e2a867fab08fa 338 SUPERFAMILY SSF89028 1 175 3.14E-50 T 18-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CH53_3357 616c27c219cdba611d0e2a867fab08fa 338 SUPERFAMILY SSF143744 199 334 2.22E-37 T 18-10-2018 IPR038084 GlcG-like domain superfamily CH53_4390 bb775173b9bcfea251cc73dd41222113 118 Gene3D G3DSA:2.10.109.10 4 117 3.6E-36 T 18-10-2018 CH53_4390 bb775173b9bcfea251cc73dd41222113 118 Pfam PF00717 Peptidase S24-like 35 89 4.3E-8 T 18-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CH53_4390 bb775173b9bcfea251cc73dd41222113 118 SUPERFAMILY SSF51306 10 113 6.8E-26 T 18-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CH53_4390 bb775173b9bcfea251cc73dd41222113 118 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 30 40 7.7E-5 T 18-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CH53_4390 bb775173b9bcfea251cc73dd41222113 118 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 41 52 7.7E-5 T 18-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CH53_4390 bb775173b9bcfea251cc73dd41222113 118 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 69 81 7.7E-5 T 18-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CH53_3936 0ad07f59ca585058d436a7aa4d10d36a 193 PIRSF PIRSF006102 1 193 1.6E-61 T 18-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CH53_3936 0ad07f59ca585058d436a7aa4d10d36a 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.2E-90 T 18-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 CH53_3936 0ad07f59ca585058d436a7aa4d10d36a 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.392 T 18-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 CH53_3936 0ad07f59ca585058d436a7aa4d10d36a 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 5.3E-60 T 18-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CH53_4200 285954b2e674579edc4f17730aa4097e 75 SUPERFAMILY SSF47413 8 65 9.56E-6 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_4200 285954b2e674579edc4f17730aa4097e 75 ProDom PD057771 CRO REGULATORY TRANSCRIPTION CP-933R REPRESSOR DNA-BINDING REGULATION BACTERIOPHAGE PROTEIN REGULATOR 1 75 3.0E-30 T 18-10-2018 IPR020114 Cro repressor, HK022-type CH53_4200 285954b2e674579edc4f17730aa4097e 75 Gene3D G3DSA:1.10.260.40 1 71 8.0E-7 T 18-10-2018 CH53_4200 285954b2e674579edc4f17730aa4097e 75 Pfam PF13384 Homeodomain-like domain 10 32 1.0E-5 T 18-10-2018 CH53_251 bb3c71dfacd1f85f25f9de2ad0398d02 396 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 1.5E-156 T 18-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CH53_251 bb3c71dfacd1f85f25f9de2ad0398d02 396 Gene3D G3DSA:3.20.20.150 1 391 2.3E-145 T 18-10-2018 CH53_251 bb3c71dfacd1f85f25f9de2ad0398d02 396 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 392 5.3E-214 T 18-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CH53_251 bb3c71dfacd1f85f25f9de2ad0398d02 396 PIRSF PIRSF016049 1 392 4.2E-178 T 18-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CH53_251 bb3c71dfacd1f85f25f9de2ad0398d02 396 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 396 224.075 T 18-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CH53_251 bb3c71dfacd1f85f25f9de2ad0398d02 396 SUPERFAMILY SSF51658 1 383 1.09E-78 T 18-10-2018 IPR036237 Xylose isomerase-like superfamily CH53_632 035e8cad8a47ef1137d5e223fbc68bc3 398 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 29 383 2.8E-170 T 18-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 CH53_632 035e8cad8a47ef1137d5e223fbc68bc3 398 Gene3D G3DSA:3.20.20.70 93 363 3.6E-113 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_632 035e8cad8a47ef1137d5e223fbc68bc3 398 SUPERFAMILY SSF102114 130 348 6.28E-15 T 18-10-2018 CH53_632 035e8cad8a47ef1137d5e223fbc68bc3 398 Gene3D G3DSA:1.10.150.530 1 92 2.8E-29 T 18-10-2018 CH53_632 035e8cad8a47ef1137d5e223fbc68bc3 398 Pfam PF04055 Radical SAM superfamily 134 302 1.0E-17 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_632 035e8cad8a47ef1137d5e223fbc68bc3 398 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 31 378 74.7 T 18-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 CH53_632 035e8cad8a47ef1137d5e223fbc68bc3 398 PIRSF PIRSF006004 24 391 2.6E-147 T 18-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 CH53_3791 441332c67c022391baa5bf5f61990530 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 8 321 4.6E-144 T 18-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 CH53_3791 441332c67c022391baa5bf5f61990530 323 Gene3D G3DSA:3.40.50.150 93 323 5.3E-21 T 18-10-2018 CH53_3791 441332c67c022391baa5bf5f61990530 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.2E-163 T 18-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like CH53_3791 441332c67c022391baa5bf5f61990530 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 322 54.267 T 18-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 CH53_3791 441332c67c022391baa5bf5f61990530 323 SUPERFAMILY SSF53335 91 323 5.92E-33 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_86 a12c838c703b9d80c7f3931dfddf0ba8 741 Gene3D G3DSA:3.40.50.2000 397 722 0.0 T 18-10-2018 CH53_86 a12c838c703b9d80c7f3931dfddf0ba8 741 PIRSF PIRSF000460 1 741 7.3E-206 T 18-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CH53_86 a12c838c703b9d80c7f3931dfddf0ba8 741 Pfam PF00343 Carbohydrate phosphorylase 26 736 0.0 T 18-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CH53_86 a12c838c703b9d80c7f3931dfddf0ba8 741 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 582 594 - T 18-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CH53_86 a12c838c703b9d80c7f3931dfddf0ba8 741 Gene3D G3DSA:3.40.50.2000 1 736 0.0 T 18-10-2018 CH53_86 a12c838c703b9d80c7f3931dfddf0ba8 741 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 1 736 0.0 T 18-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CH53_86 a12c838c703b9d80c7f3931dfddf0ba8 741 SUPERFAMILY SSF53756 1 737 3.06E-276 T 18-10-2018 CH53_4197 7de3286050b723296433356d85fe924e 268 Pfam PF04492 Bacteriophage replication protein O 4 98 8.4E-37 T 18-10-2018 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 CH53_4197 7de3286050b723296433356d85fe924e 268 Gene3D G3DSA:1.10.10.10 2 101 9.2E-40 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4197 7de3286050b723296433356d85fe924e 268 TIGRFAM TIGR01610 phage_O_Nterm: phage replication protein O, N-terminal domain 6 98 2.3E-29 T 18-10-2018 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 CH53_1645 aca983b8d078413600e852be443e5728 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 18-10-2018 IPR023765 Solute-binding protein family 5, conserved site CH53_1645 aca983b8d078413600e852be443e5728 535 Gene3D G3DSA:3.10.105.10 292 510 1.2E-196 T 18-10-2018 CH53_1645 aca983b8d078413600e852be443e5728 535 Gene3D G3DSA:3.40.190.10 211 523 1.2E-196 T 18-10-2018 CH53_1645 aca983b8d078413600e852be443e5728 535 PIRSF PIRSF002741 22 534 1.2E-119 T 18-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CH53_1645 aca983b8d078413600e852be443e5728 535 Gene3D G3DSA:3.90.76.10 50 210 1.2E-196 T 18-10-2018 CH53_1645 aca983b8d078413600e852be443e5728 535 SUPERFAMILY SSF53850 29 534 3.44E-161 T 18-10-2018 CH53_1645 aca983b8d078413600e852be443e5728 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 5.0E-107 T 18-10-2018 IPR000914 Solute-binding protein family 5 domain CH53_432 6bf72db07bd8b16f816af944cbb84fc0 268 Pfam PF01925 Sulfite exporter TauE/SafE 14 248 1.3E-46 T 18-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CH53_8 8172de4faeda58c3298dd1fc7af162b3 317 Gene3D G3DSA:3.40.47.10 1 317 4.5E-123 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_8 8172de4faeda58c3298dd1fc7af162b3 317 SUPERFAMILY SSF53901 4 317 3.12E-69 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_8 8172de4faeda58c3298dd1fc7af162b3 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 4.3E-31 T 18-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CH53_8 8172de4faeda58c3298dd1fc7af162b3 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 4.1E-36 T 18-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CH53_8 8172de4faeda58c3298dd1fc7af162b3 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 1.7E-146 T 18-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CH53_8 8172de4faeda58c3298dd1fc7af162b3 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 69.412 T 18-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CH53_3495 16683ff4bc56f17b8f344a0ff1acea3e 197 Gene3D G3DSA:3.40.1440.10 80 186 4.3E-5 T 18-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CH53_3363 4bea0bb4541e8333fd3104e3d9ac949b 113 PIRSF PIRSF011503 1 113 2.5E-39 T 18-10-2018 IPR009192 Diol/glycerol dehydratase reactivating factor, small subunit CH53_3363 4bea0bb4541e8333fd3104e3d9ac949b 113 Pfam PF02288 Dehydratase medium subunit 7 113 5.4E-35 T 18-10-2018 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor CH53_3363 4bea0bb4541e8333fd3104e3d9ac949b 113 SUPERFAMILY SSF52968 2 113 2.88E-39 T 18-10-2018 IPR010254 B12-dependent dehydratases, beta subunit CH53_3363 4bea0bb4541e8333fd3104e3d9ac949b 113 Gene3D G3DSA:3.40.50.10150 1 113 6.2E-39 T 18-10-2018 IPR010254 B12-dependent dehydratases, beta subunit CH53_651 44d77290f3e5c99d9863356bbf17779c 221 PIRSF PIRSF008159 4 221 1.5E-72 T 18-10-2018 IPR016537 Uncharacterised conserved protein UCP008159, CH53_651 44d77290f3e5c99d9863356bbf17779c 221 Pfam PF06226 Protein of unknown function (DUF1007) 22 220 6.3E-64 T 18-10-2018 IPR010412 Protein of unknown function DUF1007 CH53_772 75400fa142c80026eac9ec81ceb653df 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.4E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_772 75400fa142c80026eac9ec81ceb653df 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.4E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_772 75400fa142c80026eac9ec81ceb653df 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.4E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_772 75400fa142c80026eac9ec81ceb653df 243 SUPERFAMILY SSF51735 3 242 2.19E-70 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_772 75400fa142c80026eac9ec81ceb653df 243 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 243 5.9E-127 T 18-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CH53_772 75400fa142c80026eac9ec81ceb653df 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 9.8E-56 T 18-10-2018 CH53_772 75400fa142c80026eac9ec81ceb653df 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 189 3.0E-4 T 18-10-2018 CH53_772 75400fa142c80026eac9ec81ceb653df 243 Gene3D G3DSA:3.40.50.720 3 243 4.9E-72 T 18-10-2018 CH53_772 75400fa142c80026eac9ec81ceb653df 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.6E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_772 75400fa142c80026eac9ec81ceb653df 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.6E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_772 75400fa142c80026eac9ec81ceb653df 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.6E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_772 75400fa142c80026eac9ec81ceb653df 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.6E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_772 75400fa142c80026eac9ec81ceb653df 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 2.6E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_772 75400fa142c80026eac9ec81ceb653df 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.6E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3080 07afc487ee5b809a6ebc4df63b3d254e 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 18-10-2018 IPR020549 Endoribonuclease YbeY, conserved site CH53_3080 07afc487ee5b809a6ebc4df63b3d254e 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.117 T 18-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CH53_3080 07afc487ee5b809a6ebc4df63b3d254e 157 Pfam PF02130 Uncharacterized protein family UPF0054 21 144 8.1E-39 T 18-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CH53_3080 07afc487ee5b809a6ebc4df63b3d254e 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 145 4.9E-36 T 18-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CH53_3080 07afc487ee5b809a6ebc4df63b3d254e 157 Gene3D G3DSA:3.40.390.30 1 155 1.5E-59 T 18-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 CH53_3080 07afc487ee5b809a6ebc4df63b3d254e 157 SUPERFAMILY SSF55486 3 151 3.42E-49 T 18-10-2018 CH53_2807 eaf282e02e8862cce87b379c7453e02d 422 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 413 7.7E-65 T 18-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CH53_2807 eaf282e02e8862cce87b379c7453e02d 422 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 413 2.6E-150 T 18-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CH53_2807 eaf282e02e8862cce87b379c7453e02d 422 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 9 81 1.0E-22 T 18-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CH53_3181 1fa53ef0457f329d4f85902f212ae7a9 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 5.1E-66 T 18-10-2018 IPR000150 Cof family GO:0016787 CH53_3181 1fa53ef0457f329d4f85902f212ae7a9 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 221 240 1.8E-5 T 18-10-2018 CH53_3181 1fa53ef0457f329d4f85902f212ae7a9 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 7 21 1.8E-5 T 18-10-2018 CH53_3181 1fa53ef0457f329d4f85902f212ae7a9 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 244 256 1.8E-5 T 18-10-2018 CH53_3181 1fa53ef0457f329d4f85902f212ae7a9 273 SUPERFAMILY SSF56784 1 271 6.62E-67 T 18-10-2018 IPR036412 HAD-like superfamily CH53_3181 1fa53ef0457f329d4f85902f212ae7a9 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 18-10-2018 CH53_3181 1fa53ef0457f329d4f85902f212ae7a9 273 Gene3D G3DSA:3.40.50.1000 4 267 2.6E-61 T 18-10-2018 IPR023214 HAD superfamily CH53_3181 1fa53ef0457f329d4f85902f212ae7a9 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 74 2.5E-13 T 18-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CH53_3181 1fa53ef0457f329d4f85902f212ae7a9 273 Gene3D G3DSA:3.30.1240.10 84 196 2.6E-61 T 18-10-2018 CH53_3181 1fa53ef0457f329d4f85902f212ae7a9 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 4.6E-63 T 18-10-2018 CH53_1038 c83a852f8b6d315864993836f63509ab 200 SUPERFAMILY SSF52016 1 194 7.06E-60 T 18-10-2018 CH53_1038 c83a852f8b6d315864993836f63509ab 200 Gene3D G3DSA:3.20.19.10 1 180 2.2E-77 T 18-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CH53_1038 c83a852f8b6d315864993836f63509ab 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 3.8E-97 T 18-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CH53_1038 c83a852f8b6d315864993836f63509ab 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.869 T 18-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CH53_1038 c83a852f8b6d315864993836f63509ab 200 Pfam PF00694 Aconitase C-terminal domain 1 125 2.4E-39 T 18-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 CH53_2284 604698aad9d568b86d4b06c2d9724441 351 Pfam PF00107 Zinc-binding dehydrogenase 187 310 2.6E-22 T 18-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CH53_2284 604698aad9d568b86d4b06c2d9724441 351 SUPERFAMILY SSF50129 16 175 5.03E-51 T 18-10-2018 IPR011032 GroES-like superfamily CH53_2284 604698aad9d568b86d4b06c2d9724441 351 Gene3D G3DSA:3.90.180.10 10 343 3.0E-133 T 18-10-2018 CH53_2284 604698aad9d568b86d4b06c2d9724441 351 SUPERFAMILY SSF51735 150 314 6.41E-43 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2284 604698aad9d568b86d4b06c2d9724441 351 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 18-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CH53_2284 604698aad9d568b86d4b06c2d9724441 351 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 145 5.4E-25 T 18-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CH53_2284 604698aad9d568b86d4b06c2d9724441 351 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 180 207 - T 18-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CH53_2284 604698aad9d568b86d4b06c2d9724441 351 Gene3D G3DSA:3.40.50.720 168 323 3.0E-133 T 18-10-2018 CH53_2284 604698aad9d568b86d4b06c2d9724441 351 SMART SM00829 9 344 1.2E-4 T 18-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CH53_1455 ee9240b781bc462ad55dcae3cdee12aa 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 4.1E-114 T 18-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CH53_1455 ee9240b781bc462ad55dcae3cdee12aa 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 1.6E-30 T 18-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CH53_1455 ee9240b781bc462ad55dcae3cdee12aa 315 SUPERFAMILY SSF50486 208 309 3.73E-36 T 18-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 CH53_1455 ee9240b781bc462ad55dcae3cdee12aa 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 18-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CH53_1455 ee9240b781bc462ad55dcae3cdee12aa 315 Gene3D G3DSA:3.10.25.10 210 315 1.0E-38 T 18-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CH53_1455 ee9240b781bc462ad55dcae3cdee12aa 315 SUPERFAMILY SSF53328 5 207 2.75E-67 T 18-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CH53_1455 ee9240b781bc462ad55dcae3cdee12aa 315 Pfam PF00551 Formyl transferase 6 181 9.7E-51 T 18-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CH53_1455 ee9240b781bc462ad55dcae3cdee12aa 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 37.092 T 18-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CH53_1455 ee9240b781bc462ad55dcae3cdee12aa 315 Gene3D G3DSA:3.40.50.170 1 209 1.7E-89 T 18-10-2018 CH53_245 90f145a2930dd67dba14086b025e88d9 384 Gene3D G3DSA:3.40.50.10490 2 197 2.4E-60 T 18-10-2018 CH53_245 90f145a2930dd67dba14086b025e88d9 384 Gene3D G3DSA:3.40.50.10490 198 376 1.1E-70 T 18-10-2018 CH53_245 90f145a2930dd67dba14086b025e88d9 384 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 13 382 1.9E-177 T 18-10-2018 IPR014180 Sugar isomerase, AgaS GO:0016853 CH53_245 90f145a2930dd67dba14086b025e88d9 384 Pfam PF01380 SIS domain 225 351 1.7E-18 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_245 90f145a2930dd67dba14086b025e88d9 384 Pfam PF01380 SIS domain 53 188 8.8E-25 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_245 90f145a2930dd67dba14086b025e88d9 384 SUPERFAMILY SSF53697 15 373 8.69E-52 T 18-10-2018 CH53_553 11a31e4fd913c9bdfc7eb0e79ea19f5e 95 Gene3D G3DSA:3.30.2310.20 1 95 7.5E-30 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CH53_553 11a31e4fd913c9bdfc7eb0e79ea19f5e 95 SUPERFAMILY SSF143011 1 82 1.05E-22 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CH53_553 11a31e4fd913c9bdfc7eb0e79ea19f5e 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 1.9E-12 T 18-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CH53_553 11a31e4fd913c9bdfc7eb0e79ea19f5e 95 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 86 3.1E-8 T 18-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CH53_1729 c665e9a736a50d3d6d906052339bd21d 361 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 18-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CH53_1729 c665e9a736a50d3d6d906052339bd21d 361 Gene3D G3DSA:1.20.1050.90 120 297 3.4E-79 T 18-10-2018 CH53_1729 c665e9a736a50d3d6d906052339bd21d 361 Gene3D G3DSA:3.40.50.300 8 331 3.4E-79 T 18-10-2018 CH53_1729 c665e9a736a50d3d6d906052339bd21d 361 SUPERFAMILY SSF52540 1 340 2.61E-40 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1729 c665e9a736a50d3d6d906052339bd21d 361 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 7.1E-132 T 18-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CH53_1729 c665e9a736a50d3d6d906052339bd21d 361 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 361 98.526 T 18-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CH53_1729 c665e9a736a50d3d6d906052339bd21d 361 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 342 4.1E-40 T 18-10-2018 IPR003395 RecF/RecN/SMC, N-terminal CH53_1729 c665e9a736a50d3d6d906052339bd21d 361 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 18-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CH53_1552 097b847c346d2e8219cf2a34672af483 226 Gene3D G3DSA:3.40.50.1000 9 201 2.8E-25 T 18-10-2018 IPR023214 HAD superfamily CH53_1552 097b847c346d2e8219cf2a34672af483 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 4.0E-16 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1552 097b847c346d2e8219cf2a34672af483 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 181 194 6.4E-9 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1552 097b847c346d2e8219cf2a34672af483 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 6.4E-9 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1552 097b847c346d2e8219cf2a34672af483 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 6.4E-9 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1552 097b847c346d2e8219cf2a34672af483 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 6.4E-9 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1552 097b847c346d2e8219cf2a34672af483 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 6.4E-9 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1552 097b847c346d2e8219cf2a34672af483 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 1.2E-12 T 18-10-2018 CH53_1552 097b847c346d2e8219cf2a34672af483 226 SUPERFAMILY SSF56784 6 217 3.6E-44 T 18-10-2018 IPR036412 HAD-like superfamily CH53_3115 07a6822f33bd120dfa60bec3c4deb6fd 247 Pfam PF13610 DDE domain 75 211 2.0E-50 T 18-10-2018 IPR032874 DDE domain CH53_3115 07a6822f33bd120dfa60bec3c4deb6fd 247 SUPERFAMILY SSF53098 71 195 6.07E-13 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_3115 07a6822f33bd120dfa60bec3c4deb6fd 247 Gene3D G3DSA:3.30.420.10 70 207 1.4E-5 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CH53_3083 c86df855cd1e6a5fbdc6525115445998 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 5.1E-18 T 18-10-2018 CH53_3083 c86df855cd1e6a5fbdc6525115445998 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 5.1E-18 T 18-10-2018 CH53_3083 c86df855cd1e6a5fbdc6525115445998 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 5.1E-18 T 18-10-2018 CH53_3083 c86df855cd1e6a5fbdc6525115445998 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 5.1E-18 T 18-10-2018 CH53_3083 c86df855cd1e6a5fbdc6525115445998 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 9 392 6.1E-127 T 18-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CH53_3083 c86df855cd1e6a5fbdc6525115445998 393 Pfam PF01494 FAD binding domain 8 341 1.6E-26 T 18-10-2018 IPR002938 FAD-binding domain GO:0071949 CH53_3083 c86df855cd1e6a5fbdc6525115445998 393 Gene3D G3DSA:3.30.9.50 84 271 1.9E-105 T 18-10-2018 CH53_3083 c86df855cd1e6a5fbdc6525115445998 393 SUPERFAMILY SSF51905 7 384 3.05E-60 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_3083 c86df855cd1e6a5fbdc6525115445998 393 Gene3D G3DSA:3.50.50.60 9 340 1.9E-105 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_1298 4b8de00e8f26d1b54ba112da6a650455 323 Gene3D G3DSA:1.10.600.10 1 322 1.1E-121 T 18-10-2018 IPR008949 Isoprenoid synthase domain superfamily CH53_1298 4b8de00e8f26d1b54ba112da6a650455 323 Pfam PF00348 Polyprenyl synthetase 32 263 4.7E-75 T 18-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 CH53_1298 4b8de00e8f26d1b54ba112da6a650455 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 18-10-2018 IPR033749 Polyprenyl synthetase, conserved site CH53_1298 4b8de00e8f26d1b54ba112da6a650455 323 SUPERFAMILY SSF48576 6 322 2.7E-97 T 18-10-2018 IPR008949 Isoprenoid synthase domain superfamily CH53_1298 4b8de00e8f26d1b54ba112da6a650455 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 18-10-2018 IPR033749 Polyprenyl synthetase, conserved site CH53_1438 c5e5b9ede3ccd692e27212cac1f0861d 438 SUPERFAMILY SSF118215 8 412 4.18E-125 T 18-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CH53_1438 c5e5b9ede3ccd692e27212cac1f0861d 438 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 9.6E-119 T 18-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CH53_1438 c5e5b9ede3ccd692e27212cac1f0861d 438 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 18-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CH53_1438 c5e5b9ede3ccd692e27212cac1f0861d 438 Gene3D G3DSA:1.10.3860.10 1 427 1.5E-137 T 18-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CH53_1438 c5e5b9ede3ccd692e27212cac1f0861d 438 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 1 428 45.845 T 18-10-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 CH53_1438 c5e5b9ede3ccd692e27212cac1f0861d 438 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 6.5E-53 T 18-10-2018 CH53_1438 c5e5b9ede3ccd692e27212cac1f0861d 438 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 6.5E-53 T 18-10-2018 CH53_1438 c5e5b9ede3ccd692e27212cac1f0861d 438 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 6.5E-53 T 18-10-2018 CH53_1438 c5e5b9ede3ccd692e27212cac1f0861d 438 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 6.5E-53 T 18-10-2018 CH53_1438 c5e5b9ede3ccd692e27212cac1f0861d 438 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 6.5E-53 T 18-10-2018 CH53_1438 c5e5b9ede3ccd692e27212cac1f0861d 438 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 6.5E-53 T 18-10-2018 CH53_1438 c5e5b9ede3ccd692e27212cac1f0861d 438 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 6.5E-53 T 18-10-2018 CH53_1438 c5e5b9ede3ccd692e27212cac1f0861d 438 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 6.5E-53 T 18-10-2018 CH53_1438 c5e5b9ede3ccd692e27212cac1f0861d 438 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 18-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CH53_4229 e053e58c6dc6aec28e7f26aeae7475c4 397 SUPERFAMILY SSF56349 98 380 6.47E-44 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CH53_4229 e053e58c6dc6aec28e7f26aeae7475c4 397 Pfam PF13356 Arm DNA-binding domain 2 86 7.3E-13 T 18-10-2018 IPR025166 Integrase, DNA-binding domain CH53_4229 e053e58c6dc6aec28e7f26aeae7475c4 397 Gene3D G3DSA:1.10.150.130 93 205 2.3E-20 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal CH53_4229 e053e58c6dc6aec28e7f26aeae7475c4 397 Gene3D G3DSA:1.10.443.10 206 390 1.2E-12 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CH53_4229 e053e58c6dc6aec28e7f26aeae7475c4 397 Pfam PF00589 Phage integrase family 215 370 3.9E-13 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CH53_4229 e053e58c6dc6aec28e7f26aeae7475c4 397 Gene3D G3DSA:3.30.160.390 1 88 8.6E-18 T 18-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CH53_883 87e5bb8f021f5fb15e5722a2e9fe6279 384 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 32 125 6.9E-6 T 18-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CH53_883 87e5bb8f021f5fb15e5722a2e9fe6279 384 SUPERFAMILY SSF54826 2 127 1.65E-28 T 18-10-2018 CH53_883 87e5bb8f021f5fb15e5722a2e9fe6279 384 Gene3D G3DSA:3.20.20.120 118 381 1.0E-90 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CH53_883 87e5bb8f021f5fb15e5722a2e9fe6279 384 Pfam PF13378 Enolase C-terminal domain-like 152 374 1.1E-46 T 18-10-2018 IPR029065 Enolase C-terminal domain-like CH53_883 87e5bb8f021f5fb15e5722a2e9fe6279 384 Gene3D G3DSA:3.30.390.10 1 117 3.2E-27 T 18-10-2018 IPR029017 Enolase-like, N-terminal CH53_883 87e5bb8f021f5fb15e5722a2e9fe6279 384 SUPERFAMILY SSF51604 113 379 4.06E-59 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CH53_883 87e5bb8f021f5fb15e5722a2e9fe6279 384 SMART SM00922 150 253 1.1E-14 T 18-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CH53_577 0ba954efa100e633514563e7ad24b365 189 PIRSF PIRSF028103 5 180 2.2E-64 T 18-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 CH53_577 0ba954efa100e633514563e7ad24b365 189 Pfam PF13740 ACT domain 7 82 1.0E-25 T 18-10-2018 CH53_577 0ba954efa100e633514563e7ad24b365 189 SUPERFAMILY SSF55021 91 179 2.0E-18 T 18-10-2018 CH53_577 0ba954efa100e633514563e7ad24b365 189 Gene3D G3DSA:3.30.70.260 91 188 4.1E-32 T 18-10-2018 CH53_577 0ba954efa100e633514563e7ad24b365 189 SUPERFAMILY SSF55021 7 85 1.83E-16 T 18-10-2018 CH53_577 0ba954efa100e633514563e7ad24b365 189 Gene3D G3DSA:3.30.70.260 5 89 1.4E-25 T 18-10-2018 CH53_3289 6ddd33a7bb6c1d936e519d47c0e16fa1 92 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 84 2.5E-26 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CH53_3289 6ddd33a7bb6c1d936e519d47c0e16fa1 92 Pfam PF01455 HupF/HypC family 1 74 1.4E-26 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CH53_3289 6ddd33a7bb6c1d936e519d47c0e16fa1 92 SUPERFAMILY SSF159127 1 87 6.15E-28 T 18-10-2018 IPR037254 HupF/HypC superfamily CH53_3289 6ddd33a7bb6c1d936e519d47c0e16fa1 92 Gene3D G3DSA:2.40.50.970 1 83 3.9E-26 T 18-10-2018 IPR037254 HupF/HypC superfamily CH53_3289 6ddd33a7bb6c1d936e519d47c0e16fa1 92 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 18-10-2018 IPR019812 Hydrogenase assembly chaperone, conserved site CH53_3289 6ddd33a7bb6c1d936e519d47c0e16fa1 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 65 77 5.5E-22 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CH53_3289 6ddd33a7bb6c1d936e519d47c0e16fa1 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 5.5E-22 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CH53_3289 6ddd33a7bb6c1d936e519d47c0e16fa1 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 5.5E-22 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CH53_3289 6ddd33a7bb6c1d936e519d47c0e16fa1 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 47 63 5.5E-22 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CH53_2484 29a56bec5fc9c804455bfd8ba06ed235 229 Pfam PF01988 VIT family 14 221 1.4E-51 T 18-10-2018 IPR008217 Ccc1 family CH53_374 0a082545826bb16efa4da2d5df8162bb 181 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 157 1.8E-33 T 18-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_374 0a082545826bb16efa4da2d5df8162bb 181 Gene3D G3DSA:1.20.120.1200 1 159 1.1E-47 T 18-10-2018 CH53_1475 efc89824c716fc59a7318033130c78cc 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 18-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1475 efc89824c716fc59a7318033130c78cc 101 SUPERFAMILY SSF57716 2 101 2.85E-36 T 18-10-2018 CH53_1475 efc89824c716fc59a7318033130c78cc 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.588 T 18-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid CH53_1475 efc89824c716fc59a7318033130c78cc 101 Gene3D G3DSA:4.10.830.10 41 101 3.4E-23 T 18-10-2018 CH53_1475 efc89824c716fc59a7318033130c78cc 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 4.9E-26 T 18-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2562 0fe4dd7bbf96f25fdd04fd777f73c140 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 9.1E-6 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2562 0fe4dd7bbf96f25fdd04fd777f73c140 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 9.1E-6 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2562 0fe4dd7bbf96f25fdd04fd777f73c140 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 9.1E-6 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2562 0fe4dd7bbf96f25fdd04fd777f73c140 204 Gene3D G3DSA:3.40.50.2300 1 131 5.8E-28 T 18-10-2018 CH53_2562 0fe4dd7bbf96f25fdd04fd777f73c140 204 SUPERFAMILY SSF52172 2 122 5.98E-26 T 18-10-2018 IPR011006 CheY-like superfamily CH53_2562 0fe4dd7bbf96f25fdd04fd777f73c140 204 Gene3D G3DSA:1.10.10.10 132 204 2.4E-17 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2562 0fe4dd7bbf96f25fdd04fd777f73c140 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 198 2.1E-14 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2562 0fe4dd7bbf96f25fdd04fd777f73c140 204 Pfam PF00072 Response regulator receiver domain 4 113 3.8E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_2562 0fe4dd7bbf96f25fdd04fd777f73c140 204 SMART SM00421 141 198 3.5E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2562 0fe4dd7bbf96f25fdd04fd777f73c140 204 SMART SM00448 1 113 1.5E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_2562 0fe4dd7bbf96f25fdd04fd777f73c140 204 SUPERFAMILY SSF46894 136 202 1.84E-14 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_269 09404601130180c0f51299aef6326e74 334 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 45.475 T 18-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CH53_269 09404601130180c0f51299aef6326e74 334 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 5.8E-98 T 18-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CH53_1060 440275e0670fd7763b38589e9bf8a3f7 291 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 271 2.6E-149 T 18-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CH53_1060 440275e0670fd7763b38589e9bf8a3f7 291 Gene3D G3DSA:3.60.21.10 1 279 4.3E-83 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like CH53_1060 440275e0670fd7763b38589e9bf8a3f7 291 SUPERFAMILY SSF56300 1 259 9.42E-57 T 18-10-2018 CH53_1060 440275e0670fd7763b38589e9bf8a3f7 291 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 51.675 T 18-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CH53_1060 440275e0670fd7763b38589e9bf8a3f7 291 Pfam PF00149 Calcineurin-like phosphoesterase 2 127 2.1E-13 T 18-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CH53_1060 440275e0670fd7763b38589e9bf8a3f7 291 PIRSF PIRSF000903 1 275 2.2E-122 T 18-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CH53_4072 c4b4a6cf080a963bce6cc565a6384696 299 SUPERFAMILY SSF46785 1 87 3.87E-17 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_4072 c4b4a6cf080a963bce6cc565a6384696 299 SUPERFAMILY SSF53850 88 297 1.57E-27 T 18-10-2018 CH53_4072 c4b4a6cf080a963bce6cc565a6384696 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.7E-14 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_4072 c4b4a6cf080a963bce6cc565a6384696 299 Gene3D G3DSA:3.40.190.290 90 298 1.0E-27 T 18-10-2018 CH53_4072 c4b4a6cf080a963bce6cc565a6384696 299 Pfam PF03466 LysR substrate binding domain 87 296 3.1E-28 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_4072 c4b4a6cf080a963bce6cc565a6384696 299 Gene3D G3DSA:1.10.10.10 1 83 6.9E-21 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4072 c4b4a6cf080a963bce6cc565a6384696 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_4072 c4b4a6cf080a963bce6cc565a6384696 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_4072 c4b4a6cf080a963bce6cc565a6384696 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1301 4c3bbd65b743484c503355af653628cd 91 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 6.5E-38 T 18-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain CH53_1301 4c3bbd65b743484c503355af653628cd 91 SUPERFAMILY SSF47413 4 72 6.75E-31 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_1301 4c3bbd65b743484c503355af653628cd 91 Gene3D G3DSA:1.10.260.40 3 71 2.3E-33 T 18-10-2018 CH53_1004 9ec8f5398bdd0f9d9d9c37c2218b558d 347 Gene3D G3DSA:3.20.20.70 1 345 2.5E-116 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_1004 9ec8f5398bdd0f9d9d9c37c2218b558d 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 1.1E-198 T 18-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CH53_1004 9ec8f5398bdd0f9d9d9c37c2218b558d 347 PIRSF PIRSF000235 1 347 1.0E-200 T 18-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CH53_1004 9ec8f5398bdd0f9d9d9c37c2218b558d 347 SUPERFAMILY SSF51412 7 335 7.2E-101 T 18-10-2018 CH53_1004 9ec8f5398bdd0f9d9d9c37c2218b558d 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 50.591 T 18-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CH53_1004 9ec8f5398bdd0f9d9d9c37c2218b558d 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 2.6E-79 T 18-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CH53_1004 9ec8f5398bdd0f9d9d9c37c2218b558d 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 18-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CH53_1004 9ec8f5398bdd0f9d9d9c37c2218b558d 347 SMART SM01240 7 344 2.7E-141 T 18-10-2018 CH53_3241 052a1dff967519135161b1dbcb4fa9cd 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3241 052a1dff967519135161b1dbcb4fa9cd 240 SUPERFAMILY SSF52540 1 235 1.12E-80 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3241 052a1dff967519135161b1dbcb4fa9cd 240 SMART SM00382 26 213 7.4E-16 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3241 052a1dff967519135161b1dbcb4fa9cd 240 Pfam PF00005 ABC transporter 17 165 1.2E-35 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3241 052a1dff967519135161b1dbcb4fa9cd 240 PIRSF PIRSF039085 1 240 2.5E-109 T 18-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CH53_3241 052a1dff967519135161b1dbcb4fa9cd 240 Gene3D G3DSA:3.40.50.300 1 240 3.9E-80 T 18-10-2018 CH53_3306 c55ee63805b0b7d7f13b65e1fab805cb 528 Pfam PF03741 Integral membrane protein TerC family 15 203 1.9E-50 T 18-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 CH53_3306 c55ee63805b0b7d7f13b65e1fab805cb 528 SMART SM01091 441 520 4.6E-26 T 18-10-2018 IPR005170 Transporter-associated domain CH53_3306 c55ee63805b0b7d7f13b65e1fab805cb 528 Pfam PF00571 CBS domain 304 361 0.005 T 18-10-2018 IPR000644 CBS domain CH53_3306 c55ee63805b0b7d7f13b65e1fab805cb 528 Pfam PF00571 CBS domain 375 424 2.8E-6 T 18-10-2018 IPR000644 CBS domain CH53_3306 c55ee63805b0b7d7f13b65e1fab805cb 528 Gene3D G3DSA:3.10.580.10 285 436 1.3E-39 T 18-10-2018 CH53_3306 c55ee63805b0b7d7f13b65e1fab805cb 528 Pfam PF03471 Transporter associated domain 442 519 2.1E-17 T 18-10-2018 IPR005170 Transporter-associated domain CH53_3306 c55ee63805b0b7d7f13b65e1fab805cb 528 SUPERFAMILY SSF54631 292 426 7.83E-25 T 18-10-2018 CH53_3306 c55ee63805b0b7d7f13b65e1fab805cb 528 SUPERFAMILY SSF56176 439 520 1.42E-21 T 18-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CH53_3306 c55ee63805b0b7d7f13b65e1fab805cb 528 Gene3D G3DSA:3.30.465.10 437 520 6.5E-20 T 18-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CH53_2622 4901dbf336ec042488d2af002276e4ce 959 SUPERFAMILY SSF53383 17 441 5.61E-98 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_2622 4901dbf336ec042488d2af002276e4ce 959 SUPERFAMILY SSF53383 466 953 8.7E-98 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_2622 4901dbf336ec042488d2af002276e4ce 959 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 958 25.477 T 18-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CH53_2622 4901dbf336ec042488d2af002276e4ce 959 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 952 0.0 T 18-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CH53_2622 4901dbf336ec042488d2af002276e4ce 959 Gene3D G3DSA:3.40.640.10 96 355 2.1E-97 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_2622 4901dbf336ec042488d2af002276e4ce 959 Gene3D G3DSA:3.40.640.10 525 756 1.7E-60 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_2622 4901dbf336ec042488d2af002276e4ce 959 Gene3D G3DSA:3.90.1150.10 767 902 1.3E-41 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_2622 4901dbf336ec042488d2af002276e4ce 959 Pfam PF02347 Glycine cleavage system P-protein 16 440 3.4E-182 T 18-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CH53_2622 4901dbf336ec042488d2af002276e4ce 959 Pfam PF02347 Glycine cleavage system P-protein 477 739 1.3E-8 T 18-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CH53_965 9a3af23f4f5b4af505bd2f0590994093 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 61 79 6.1E-45 T 18-10-2018 CH53_965 9a3af23f4f5b4af505bd2f0590994093 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 280 293 6.1E-45 T 18-10-2018 CH53_965 9a3af23f4f5b4af505bd2f0590994093 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 215 233 6.1E-45 T 18-10-2018 CH53_965 9a3af23f4f5b4af505bd2f0590994093 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 243 260 6.1E-45 T 18-10-2018 CH53_965 9a3af23f4f5b4af505bd2f0590994093 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 92 107 6.1E-45 T 18-10-2018 CH53_965 9a3af23f4f5b4af505bd2f0590994093 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 191 206 6.1E-45 T 18-10-2018 CH53_965 9a3af23f4f5b4af505bd2f0590994093 303 Pfam PF01497 Periplasmic binding protein 44 277 1.3E-37 T 18-10-2018 IPR002491 ABC transporter periplasmic binding domain CH53_965 9a3af23f4f5b4af505bd2f0590994093 303 Gene3D G3DSA:3.40.50.1980 40 128 2.4E-22 T 18-10-2018 CH53_965 9a3af23f4f5b4af505bd2f0590994093 303 SUPERFAMILY SSF53807 40 297 1.02E-53 T 18-10-2018 CH53_965 9a3af23f4f5b4af505bd2f0590994093 303 Gene3D G3DSA:3.40.50.1980 131 302 6.0E-55 T 18-10-2018 CH53_825 d42791190891b3cd5ccaee2baaa59296 442 Gene3D G3DSA:1.20.1250.20 200 380 4.4E-19 T 18-10-2018 CH53_825 d42791190891b3cd5ccaee2baaa59296 442 SUPERFAMILY SSF103473 7 370 2.35E-40 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_825 d42791190891b3cd5ccaee2baaa59296 442 Pfam PF07690 Major Facilitator Superfamily 12 286 7.4E-18 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_825 d42791190891b3cd5ccaee2baaa59296 442 Gene3D G3DSA:1.20.1250.20 3 189 6.0E-12 T 18-10-2018 CH53_3140 d3fe824762bce1f13975e60fa6a2d41b 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 1.5E-34 T 18-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_3140 d3fe824762bce1f13975e60fa6a2d41b 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 7.1E-276 T 18-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_3140 d3fe824762bce1f13975e60fa6a2d41b 588 SUPERFAMILY SSF51905 4 438 2.7E-76 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_3140 d3fe824762bce1f13975e60fa6a2d41b 588 SUPERFAMILY SSF56425 236 356 6.58E-42 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_3140 d3fe824762bce1f13975e60fa6a2d41b 588 Gene3D G3DSA:3.50.50.60 9 416 1.4E-172 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_3140 d3fe824762bce1f13975e60fa6a2d41b 588 SUPERFAMILY SSF46977 452 588 1.27E-44 T 18-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_3140 d3fe824762bce1f13975e60fa6a2d41b 588 Gene3D G3DSA:3.90.700.10 246 350 1.4E-172 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_3140 d3fe824762bce1f13975e60fa6a2d41b 588 PIRSF PIRSF000171 1 580 3.2E-45 T 18-10-2018 CH53_3140 d3fe824762bce1f13975e60fa6a2d41b 588 Gene3D G3DSA:1.20.58.100 431 547 1.8E-39 T 18-10-2018 CH53_3140 d3fe824762bce1f13975e60fa6a2d41b 588 Pfam PF00890 FAD binding domain 9 405 1.8E-117 T 18-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_3140 d3fe824762bce1f13975e60fa6a2d41b 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 8.8E-242 T 18-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_3140 d3fe824762bce1f13975e60fa6a2d41b 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.0E-5 T 18-10-2018 CH53_3140 d3fe824762bce1f13975e60fa6a2d41b 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 7.0E-5 T 18-10-2018 CH53_3140 d3fe824762bce1f13975e60fa6a2d41b 588 Gene3D G3DSA:4.10.80.40 548 588 7.9E-25 T 18-10-2018 CH53_3140 d3fe824762bce1f13975e60fa6a2d41b 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 18-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_4135 36dcb57df9b420036b78f7035183f093 384 Gene3D G3DSA:3.90.1150.10 253 380 3.1E-37 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_4135 36dcb57df9b420036b78f7035183f093 384 SUPERFAMILY SSF53383 4 376 6.05E-111 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_4135 36dcb57df9b420036b78f7035183f093 384 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 373 3.6E-126 T 18-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CH53_4135 36dcb57df9b420036b78f7035183f093 384 PIRSF PIRSF000390 1 380 2.4E-107 T 18-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CH53_4135 36dcb57df9b420036b78f7035183f093 384 Gene3D G3DSA:3.40.640.10 1 252 1.5E-91 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_4135 36dcb57df9b420036b78f7035183f093 384 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 70.7 T 18-10-2018 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 CH53_4297 e271d8f76de46741271ab5a7f56d204b 419 Gene3D G3DSA:2.30.30.60 202 244 2.4E-5 T 18-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily CH53_4297 e271d8f76de46741271ab5a7f56d204b 419 SUPERFAMILY SSF50182 187 252 3.2E-12 T 18-10-2018 IPR010920 LSM domain superfamily CH53_4297 e271d8f76de46741271ab5a7f56d204b 419 Pfam PF00924 Mechanosensitive ion channel 143 398 3.8E-56 T 18-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CH53_3116 613317dfc34e6f76d9a520266ed7b482 236 Pfam PF14437 MafB19-like deaminase 117 227 2.1E-14 T 18-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CH53_3323 c27ed825d4e925b6ab5ceed1cbababf4 296 SUPERFAMILY SSF53448 1 282 1.22E-59 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_3323 c27ed825d4e925b6ab5ceed1cbababf4 296 Gene3D G3DSA:3.90.550.10 1 296 3.1E-85 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_3323 c27ed825d4e925b6ab5ceed1cbababf4 296 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 272 5.6E-114 T 18-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 CH53_3323 c27ed825d4e925b6ab5ceed1cbababf4 296 Pfam PF00483 Nucleotidyl transferase 5 272 1.5E-25 T 18-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CH53_1030 b8926b51cce76f3ffa73000e1ed2ba06 164 Gene3D G3DSA:3.30.70.260 1 80 1.2E-34 T 18-10-2018 CH53_1030 b8926b51cce76f3ffa73000e1ed2ba06 164 Gene3D G3DSA:3.30.70.1150 81 158 5.7E-27 T 18-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CH53_1030 b8926b51cce76f3ffa73000e1ed2ba06 164 Pfam PF10369 Small subunit of acetolactate synthase 85 159 1.4E-23 T 18-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CH53_1030 b8926b51cce76f3ffa73000e1ed2ba06 164 SUPERFAMILY SSF55021 3 75 1.16E-21 T 18-10-2018 CH53_1030 b8926b51cce76f3ffa73000e1ed2ba06 164 Pfam PF01842 ACT domain 5 69 7.1E-15 T 18-10-2018 IPR002912 ACT domain CH53_1030 b8926b51cce76f3ffa73000e1ed2ba06 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 77 8.0E-37 T 18-10-2018 CH53_1030 b8926b51cce76f3ffa73000e1ed2ba06 164 SUPERFAMILY SSF55021 80 163 4.43E-25 T 18-10-2018 CH53_1030 b8926b51cce76f3ffa73000e1ed2ba06 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 160 4.0E-66 T 18-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CH53_3858 f2d5bc20a5062dd414f82c83ba3e2d2d 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 18-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CH53_3858 f2d5bc20a5062dd414f82c83ba3e2d2d 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 7.4E-106 T 18-10-2018 CH53_3858 f2d5bc20a5062dd414f82c83ba3e2d2d 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 3.9E-23 T 18-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase CH53_3858 f2d5bc20a5062dd414f82c83ba3e2d2d 268 Gene3D G3DSA:3.60.10.10 1 267 7.5E-83 T 18-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CH53_3858 f2d5bc20a5062dd414f82c83ba3e2d2d 268 SUPERFAMILY SSF56219 1 267 3.27E-87 T 18-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CH53_3858 f2d5bc20a5062dd414f82c83ba3e2d2d 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 18-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 CH53_3858 f2d5bc20a5062dd414f82c83ba3e2d2d 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 1.5E-89 T 18-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CH53_3975 33611b7264c1ddb8c42243d6cb93ef98 206 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 4.0E-8 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_3975 33611b7264c1ddb8c42243d6cb93ef98 206 Gene3D G3DSA:2.160.10.10 2 206 4.9E-54 T 18-10-2018 CH53_3975 33611b7264c1ddb8c42243d6cb93ef98 206 SUPERFAMILY SSF51161 30 199 1.39E-38 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 2 451 5.0E-200 T 18-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 2 590 7.2E-264 T 18-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 SMART SM00956 398 501 6.7E-49 T 18-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 Pfam PF00271 Helicase conserved C-terminal domain 215 317 2.1E-19 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 Pfam PF09382 RQC domain 393 504 3.1E-36 T 18-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 Gene3D G3DSA:1.10.150.80 511 597 1.7E-30 T 18-10-2018 CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 SMART SM00490 237 318 2.2E-27 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 Pfam PF16124 RecQ zinc-binding 330 391 4.9E-16 T 18-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 SUPERFAMILY SSF52540 2 188 2.03E-46 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 SMART SM00487 9 205 2.7E-32 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 Pfam PF00270 DEAD/DEAH box helicase 15 172 4.9E-21 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 SUPERFAMILY SSF47819 519 595 2.03E-26 T 18-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 SMART SM00341 518 597 2.7E-25 T 18-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 Gene3D G3DSA:1.10.10.10 328 510 2.8E-50 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 Gene3D G3DSA:3.40.50.300 1 195 1.1E-85 T 18-10-2018 CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 SUPERFAMILY SSF52540 195 443 9.96E-64 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 Gene3D G3DSA:3.40.50.300 196 327 1.8E-43 T 18-10-2018 CH53_2009 6d35b975c2649d0837dcdf0a224fcb01 597 Pfam PF00570 HRDC domain 522 588 1.2E-23 T 18-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CH53_3214 672d490977195cf7beb59a44460ba4d9 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 44 285 4.7E-47 T 18-10-2018 CH53_3214 672d490977195cf7beb59a44460ba4d9 309 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 305 5.4E-99 T 18-10-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 CH53_3214 672d490977195cf7beb59a44460ba4d9 309 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 268 6.0E-83 T 18-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 CH53_3214 672d490977195cf7beb59a44460ba4d9 309 Gene3D G3DSA:3.40.190.10 31 272 7.2E-56 T 18-10-2018 CH53_3214 672d490977195cf7beb59a44460ba4d9 309 Gene3D G3DSA:3.40.190.10 117 243 7.2E-56 T 18-10-2018 CH53_3214 672d490977195cf7beb59a44460ba4d9 309 SUPERFAMILY SSF53850 44 299 4.74E-46 T 18-10-2018 CH53_2229 a24191a82bb021d1adaabaf0387a8f85 92 Gene3D G3DSA:3.30.2310.20 1 92 1.1E-35 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CH53_2229 a24191a82bb021d1adaabaf0387a8f85 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 3 92 2.5E-22 T 18-10-2018 IPR007711 Toxin HigB-1 CH53_2229 a24191a82bb021d1adaabaf0387a8f85 92 SUPERFAMILY SSF143011 1 92 1.96E-14 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CH53_1201 07e48e6582953aa2b96f61a187a64c88 240 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 98 115 - T 18-10-2018 IPR018046 Pili assembly chaperone, conserved site CH53_1201 07e48e6582953aa2b96f61a187a64c88 240 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 140 9.6E-35 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_1201 07e48e6582953aa2b96f61a187a64c88 240 Gene3D G3DSA:2.60.40.10 22 141 6.8E-38 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_1201 07e48e6582953aa2b96f61a187a64c88 240 Gene3D G3DSA:2.60.40.10 143 235 1.1E-18 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_1201 07e48e6582953aa2b96f61a187a64c88 240 SUPERFAMILY SSF49354 17 140 2.88E-34 T 18-10-2018 IPR008962 PapD-like superfamily CH53_1201 07e48e6582953aa2b96f61a187a64c88 240 PRINTS PR00969 Pili chaperone signature 122 137 1.1E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1201 07e48e6582953aa2b96f61a187a64c88 240 PRINTS PR00969 Pili chaperone signature 158 173 1.1E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1201 07e48e6582953aa2b96f61a187a64c88 240 PRINTS PR00969 Pili chaperone signature 99 116 1.1E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1201 07e48e6582953aa2b96f61a187a64c88 240 PRINTS PR00969 Pili chaperone signature 23 32 1.1E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1201 07e48e6582953aa2b96f61a187a64c88 240 PRINTS PR00969 Pili chaperone signature 69 90 1.1E-29 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1201 07e48e6582953aa2b96f61a187a64c88 240 SUPERFAMILY SSF49584 146 235 1.01E-17 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_1201 07e48e6582953aa2b96f61a187a64c88 240 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 164 220 5.8E-9 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_128 bb03efaceab9abc7a886670475cf6131 336 Gene3D G3DSA:3.20.20.70 1 336 5.1E-146 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_128 bb03efaceab9abc7a886670475cf6131 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 18-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CH53_128 bb03efaceab9abc7a886670475cf6131 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 6.2E-93 T 18-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CH53_128 bb03efaceab9abc7a886670475cf6131 336 SUPERFAMILY SSF51395 1 334 7.69E-106 T 18-10-2018 CH53_128 bb03efaceab9abc7a886670475cf6131 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.439 T 18-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CH53_128 bb03efaceab9abc7a886670475cf6131 336 PIRSF PIRSF000164 13 336 1.2E-96 T 18-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 CH53_128 bb03efaceab9abc7a886670475cf6131 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 18-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CH53_128 bb03efaceab9abc7a886670475cf6131 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.8E-159 T 18-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CH53_3590 f46ed9313166020c5a2377467fcbf241 497 SUPERFAMILY SSF64518 1 497 1.7E-108 T 18-10-2018 CH53_3590 f46ed9313166020c5a2377467fcbf241 497 Gene3D G3DSA:1.20.1330.10 44 456 2.5E-134 T 18-10-2018 CH53_3590 f46ed9313166020c5a2377467fcbf241 497 PRINTS PR00207 Flagellin signature 75 94 5.2E-32 T 18-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CH53_3590 f46ed9313166020c5a2377467fcbf241 497 PRINTS PR00207 Flagellin signature 36 53 5.2E-32 T 18-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CH53_3590 f46ed9313166020c5a2377467fcbf241 497 PRINTS PR00207 Flagellin signature 110 133 5.2E-32 T 18-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CH53_3590 f46ed9313166020c5a2377467fcbf241 497 Gene3D G3DSA:2.170.280.10 176 404 2.5E-134 T 18-10-2018 CH53_3590 f46ed9313166020c5a2377467fcbf241 497 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 140 1.6E-45 T 18-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CH53_3590 f46ed9313166020c5a2377467fcbf241 497 Gene3D G3DSA:1.20.58.1830 4 496 2.5E-134 T 18-10-2018 CH53_3590 f46ed9313166020c5a2377467fcbf241 497 Gene3D G3DSA:2.30.220.10 192 290 2.5E-134 T 18-10-2018 CH53_3590 f46ed9313166020c5a2377467fcbf241 497 Pfam PF00700 Bacterial flagellin C-terminal helical region 412 496 6.9E-30 T 18-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CH53_652 3310966e4af6055c7036ef2ba2d66a18 383 SUPERFAMILY SSF103473 7 372 1.15E-36 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_652 3310966e4af6055c7036ef2ba2d66a18 383 Gene3D G3DSA:1.20.1250.20 185 376 3.4E-37 T 18-10-2018 CH53_652 3310966e4af6055c7036ef2ba2d66a18 383 Pfam PF12832 MFS_1 like family 8 360 5.9E-49 T 18-10-2018 IPR024989 Major facilitator superfamily associated domain CH53_652 3310966e4af6055c7036ef2ba2d66a18 383 Gene3D G3DSA:1.20.1250.20 4 183 1.4E-17 T 18-10-2018 CH53_652 3310966e4af6055c7036ef2ba2d66a18 383 PIRSF PIRSF004925 1 383 2.5E-110 T 18-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter CH53_4249 2c36c178678505e736479b0a25524ff1 294 SUPERFAMILY SSF81345 5 261 9.42E-39 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_4249 2c36c178678505e736479b0a25524ff1 294 Pfam PF00950 ABC 3 transport family 10 265 5.8E-90 T 18-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CH53_4249 2c36c178678505e736479b0a25524ff1 294 Gene3D G3DSA:1.10.3470.10 41 270 1.5E-8 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_1753 0de03a2c4d941cfcfc789efff13c9c1b 258 SUPERFAMILY SSF52540 12 245 4.61E-61 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1753 0de03a2c4d941cfcfc789efff13c9c1b 258 Pfam PF00005 ABC transporter 27 182 2.0E-35 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1753 0de03a2c4d941cfcfc789efff13c9c1b 258 SMART SM00382 36 238 4.9E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1753 0de03a2c4d941cfcfc789efff13c9c1b 258 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1753 0de03a2c4d941cfcfc789efff13c9c1b 258 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 12 258 7.3E-121 T 18-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CH53_1753 0de03a2c4d941cfcfc789efff13c9c1b 258 Gene3D G3DSA:3.40.50.300 10 256 8.7E-68 T 18-10-2018 CH53_1261 08b94ba7bc64fb6c758065d33ffade9b 193 Pfam PF00625 Guanylate kinase 2 176 4.0E-5 T 18-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CH53_1261 08b94ba7bc64fb6c758065d33ffade9b 193 SMART SM00072 1 181 1.3E-8 T 18-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CH53_1261 08b94ba7bc64fb6c758065d33ffade9b 193 Gene3D G3DSA:3.40.50.300 7 175 7.2E-17 T 18-10-2018 CH53_1261 08b94ba7bc64fb6c758065d33ffade9b 193 SUPERFAMILY SSF52540 1 180 3.84E-34 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1261 08b94ba7bc64fb6c758065d33ffade9b 193 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 177 2.4E-64 T 18-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CH53_1261 08b94ba7bc64fb6c758065d33ffade9b 193 Gene3D G3DSA:3.30.63.10 34 89 7.2E-17 T 18-10-2018 CH53_1261 08b94ba7bc64fb6c758065d33ffade9b 193 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 178 34.514 T 18-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CH53_2914 2eacb2187b1f4e838690e4cbd52c3281 336 Gene3D G3DSA:3.90.25.10 194 327 1.0E-136 T 18-10-2018 CH53_2914 2eacb2187b1f4e838690e4cbd52c3281 336 Gene3D G3DSA:3.40.50.720 3 272 1.0E-136 T 18-10-2018 CH53_2914 2eacb2187b1f4e838690e4cbd52c3281 336 SUPERFAMILY SSF51735 1 333 2.1E-93 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2914 2eacb2187b1f4e838690e4cbd52c3281 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 333 8.7E-136 T 18-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 CH53_2914 2eacb2187b1f4e838690e4cbd52c3281 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 260 1.4E-56 T 18-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CH53_1084 03c33cbc11e9fe107c70a81670216857 429 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 18-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CH53_1084 03c33cbc11e9fe107c70a81670216857 429 Gene3D G3DSA:3.40.50.1100 85 394 1.7E-141 T 18-10-2018 CH53_1084 03c33cbc11e9fe107c70a81670216857 429 TIGRFAM TIGR00260 thrC: threonine synthase 52 397 2.1E-121 T 18-10-2018 IPR004450 Threonine synthase-like CH53_1084 03c33cbc11e9fe107c70a81670216857 429 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 96 370 1.1E-23 T 18-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CH53_1084 03c33cbc11e9fe107c70a81670216857 429 SUPERFAMILY SSF53686 1 426 2.1E-133 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH53_1084 03c33cbc11e9fe107c70a81670216857 429 Gene3D G3DSA:3.90.1380.10 1 81 7.0E-34 T 18-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily CH53_1084 03c33cbc11e9fe107c70a81670216857 429 Gene3D G3DSA:3.40.50.1100 103 401 1.7E-141 T 18-10-2018 CH53_1084 03c33cbc11e9fe107c70a81670216857 429 Pfam PF14821 Threonine synthase N terminus 8 80 3.5E-11 T 18-10-2018 IPR029144 Threonine synthase, N-terminal CH53_3739 a4ff70d41ba7ee9bf8d59734adcc7ba8 269 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 7 265 1.1E-118 T 18-10-2018 IPR010247 N-formylglutamate deformylase CH53_3739 a4ff70d41ba7ee9bf8d59734adcc7ba8 269 Gene3D G3DSA:3.40.630.40 4 265 5.7E-68 T 18-10-2018 CH53_3739 a4ff70d41ba7ee9bf8d59734adcc7ba8 269 SUPERFAMILY SSF53187 6 264 9.42E-77 T 18-10-2018 CH53_3739 a4ff70d41ba7ee9bf8d59734adcc7ba8 269 Pfam PF05013 N-formylglutamate amidohydrolase 15 232 4.8E-63 T 18-10-2018 IPR007709 N-formylglutamate amidohydrolase CH53_1265 916c710933b143d8a319c1192450aede 720 SUPERFAMILY SSF55904 572 719 2.35E-45 T 18-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 CH53_1265 916c710933b143d8a319c1192450aede 720 PIRSF PIRSF009393 1 720 4.4E-291 T 18-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CH53_1265 916c710933b143d8a319c1192450aede 720 Gene3D G3DSA:3.90.1150.10 421 600 4.0E-68 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_1265 916c710933b143d8a319c1192450aede 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 18-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CH53_1265 916c710933b143d8a319c1192450aede 720 SUPERFAMILY SSF52172 1 108 3.28E-34 T 18-10-2018 IPR011006 CheY-like superfamily CH53_1265 916c710933b143d8a319c1192450aede 720 Gene3D G3DSA:3.40.50.220 1 108 4.6E-22 T 18-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 CH53_1265 916c710933b143d8a319c1192450aede 720 SUPERFAMILY SSF53383 109 566 8.12E-120 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_1265 916c710933b143d8a319c1192450aede 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 704 6.0E-45 T 18-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CH53_1265 916c710933b143d8a319c1192450aede 720 Gene3D G3DSA:3.40.640.10 109 420 9.6E-86 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_1265 916c710933b143d8a319c1192450aede 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 549 2.8E-196 T 18-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CH53_1265 916c710933b143d8a319c1192450aede 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 719 0.0 T 18-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 CH53_1265 916c710933b143d8a319c1192450aede 720 Gene3D G3DSA:3.90.100.10 601 720 1.5E-41 T 18-10-2018 CH53_1265 916c710933b143d8a319c1192450aede 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 5 103 7.4E-25 T 18-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CH53_28 d2a073b5d4ba199b03529dc04dc4c97d 586 Gene3D G3DSA:3.40.190.10 24 255 8.8E-18 T 18-10-2018 CH53_28 d2a073b5d4ba199b03529dc04dc4c97d 586 SMART SM00387 466 574 8.3E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_28 d2a073b5d4ba199b03529dc04dc4c97d 586 Pfam PF00512 His Kinase A (phospho-acceptor) domain 354 414 3.1E-6 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_28 d2a073b5d4ba199b03529dc04dc4c97d 586 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 24 256 6.3E-33 T 18-10-2018 CH53_28 d2a073b5d4ba199b03529dc04dc4c97d 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 515 1.9E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_28 d2a073b5d4ba199b03529dc04dc4c97d 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 548 1.9E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_28 d2a073b5d4ba199b03529dc04dc4c97d 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 529 1.9E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_28 d2a073b5d4ba199b03529dc04dc4c97d 586 Gene3D G3DSA:3.40.190.10 112 230 8.8E-18 T 18-10-2018 CH53_28 d2a073b5d4ba199b03529dc04dc4c97d 586 Gene3D G3DSA:3.30.565.10 430 575 2.2E-20 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_28 d2a073b5d4ba199b03529dc04dc4c97d 586 SUPERFAMILY SSF53850 35 256 5.67E-13 T 18-10-2018 CH53_28 d2a073b5d4ba199b03529dc04dc4c97d 586 SUPERFAMILY SSF55874 430 574 3.27E-23 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_28 d2a073b5d4ba199b03529dc04dc4c97d 586 SUPERFAMILY SSF47384 341 415 3.53E-8 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_28 d2a073b5d4ba199b03529dc04dc4c97d 586 Gene3D G3DSA:1.10.287.130 329 417 2.6E-15 T 18-10-2018 CH53_28 d2a073b5d4ba199b03529dc04dc4c97d 586 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 470 573 3.8E-9 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_4062 f1abd57e0ebbf2b33eb4632ad148172e 341 Pfam PF00158 Sigma-54 interaction domain 9 170 2.8E-60 T 18-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CH53_4062 f1abd57e0ebbf2b33eb4632ad148172e 341 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 18-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH53_4062 f1abd57e0ebbf2b33eb4632ad148172e 341 SUPERFAMILY SSF46689 222 333 6.72E-7 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_4062 f1abd57e0ebbf2b33eb4632ad148172e 341 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 18-10-2018 IPR025944 Sigma-54 interaction domain, conserved site CH53_4062 f1abd57e0ebbf2b33eb4632ad148172e 341 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 297 314 9.4E-7 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_4062 f1abd57e0ebbf2b33eb4632ad148172e 341 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 314 334 9.4E-7 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_4062 f1abd57e0ebbf2b33eb4632ad148172e 341 SMART SM00382 28 180 1.5E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_4062 f1abd57e0ebbf2b33eb4632ad148172e 341 Gene3D G3DSA:3.40.50.300 1 179 6.6E-57 T 18-10-2018 CH53_4062 f1abd57e0ebbf2b33eb4632ad148172e 341 Pfam PF02954 Bacterial regulatory protein, Fis family 294 330 7.5E-7 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CH53_4062 f1abd57e0ebbf2b33eb4632ad148172e 341 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 331 1.0E-164 T 18-10-2018 IPR014317 Transcription activator PspF CH53_4062 f1abd57e0ebbf2b33eb4632ad148172e 341 Gene3D G3DSA:1.10.10.60 265 335 3.7E-7 T 18-10-2018 CH53_4062 f1abd57e0ebbf2b33eb4632ad148172e 341 Gene3D G3DSA:1.10.8.60 180 264 1.2E-28 T 18-10-2018 CH53_4062 f1abd57e0ebbf2b33eb4632ad148172e 341 SUPERFAMILY SSF52540 9 245 3.82E-64 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1594 91ea0e53971ec9405bce1b704c2ad0b5 646 Gene3D G3DSA:3.40.50.970 416 615 6.8E-45 T 18-10-2018 CH53_1594 91ea0e53971ec9405bce1b704c2ad0b5 646 SUPERFAMILY SSF52467 185 367 8.18E-40 T 18-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH53_1594 91ea0e53971ec9405bce1b704c2ad0b5 646 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 353 1.4E-30 T 18-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CH53_1594 91ea0e53971ec9405bce1b704c2ad0b5 646 Gene3D G3DSA:3.40.50.1220 214 405 3.6E-34 T 18-10-2018 CH53_1594 91ea0e53971ec9405bce1b704c2ad0b5 646 SUPERFAMILY SSF52518 2 208 4.72E-32 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_1594 91ea0e53971ec9405bce1b704c2ad0b5 646 Gene3D G3DSA:3.40.50.970 1 212 6.1E-32 T 18-10-2018 CH53_1594 91ea0e53971ec9405bce1b704c2ad0b5 646 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 644 7.6E-287 T 18-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 CH53_1594 91ea0e53971ec9405bce1b704c2ad0b5 646 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 196 6.7E-33 T 18-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CH53_1594 91ea0e53971ec9405bce1b704c2ad0b5 646 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 478 497 - T 18-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CH53_1594 91ea0e53971ec9405bce1b704c2ad0b5 646 SUPERFAMILY SSF52518 419 630 6.43E-53 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_1594 91ea0e53971ec9405bce1b704c2ad0b5 646 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 442 601 1.7E-39 T 18-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CH53_390 68b99aaa2c688d83e604bd87d4269b90 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 36.378 T 18-10-2018 IPR007334 Uncharacterised protein family UPF0208 CH53_390 68b99aaa2c688d83e604bd87d4269b90 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 1.4E-59 T 18-10-2018 IPR007334 Uncharacterised protein family UPF0208 CH53_3668 9895f4d3a4c01910ea2368f13b3369e8 159 SUPERFAMILY SSF49401 36 159 7.46E-21 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_3668 9895f4d3a4c01910ea2368f13b3369e8 159 Gene3D G3DSA:2.60.40.1090 38 158 3.6E-31 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_3668 9895f4d3a4c01910ea2368f13b3369e8 159 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 91 112 7.0E-5 T 18-10-2018 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 CH53_3668 9895f4d3a4c01910ea2368f13b3369e8 159 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 31 54 7.0E-5 T 18-10-2018 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 CH53_3668 9895f4d3a4c01910ea2368f13b3369e8 159 Pfam PF00419 Fimbrial protein 28 158 4.3E-16 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_3802 bea4d532f1972d79382a15cbd4f5c4b5 334 Gene3D G3DSA:3.40.50.300 23 184 1.3E-39 T 18-10-2018 CH53_3802 bea4d532f1972d79382a15cbd4f5c4b5 334 SUPERFAMILY SSF52540 23 255 7.92E-54 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3802 bea4d532f1972d79382a15cbd4f5c4b5 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 334 8.0E-42 T 18-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CH53_3802 bea4d532f1972d79382a15cbd4f5c4b5 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 185.171 T 18-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CH53_3802 bea4d532f1972d79382a15cbd4f5c4b5 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 8.1E-149 T 18-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CH53_3802 bea4d532f1972d79382a15cbd4f5c4b5 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 8 238 5.8E-117 T 18-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CH53_3802 bea4d532f1972d79382a15cbd4f5c4b5 334 Gene3D G3DSA:1.10.8.60 185 258 5.4E-29 T 18-10-2018 CH53_3802 bea4d532f1972d79382a15cbd4f5c4b5 334 Gene3D G3DSA:1.10.10.10 260 334 1.1E-32 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3802 bea4d532f1972d79382a15cbd4f5c4b5 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 1.2E-33 T 18-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CH53_3802 bea4d532f1972d79382a15cbd4f5c4b5 334 SUPERFAMILY SSF46785 260 331 3.27E-25 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3802 bea4d532f1972d79382a15cbd4f5c4b5 334 SMART SM00382 54 181 6.4E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2476 e5b4596aec6f78e68d11055cbe4fbf45 312 Gene3D G3DSA:3.20.20.330 1 309 4.7E-119 T 18-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CH53_2476 e5b4596aec6f78e68d11055cbe4fbf45 312 PIRSF PIRSF037505 273 312 0.017 T 18-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 CH53_2476 e5b4596aec6f78e68d11055cbe4fbf45 312 PIRSF PIRSF037505 3 250 4.9E-5 T 18-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 CH53_2476 e5b4596aec6f78e68d11055cbe4fbf45 312 SUPERFAMILY SSF82282 11 311 7.19E-87 T 18-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CH53_2476 e5b4596aec6f78e68d11055cbe4fbf45 312 Pfam PF02574 Homocysteine S-methyltransferase 17 309 7.6E-80 T 18-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CH53_1573 9125aff5a21137c4d2fbdcfdb4e7285b 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.1E-24 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_1573 9125aff5a21137c4d2fbdcfdb4e7285b 252 Gene3D G3DSA:1.10.10.10 1 58 2.0E-8 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1573 9125aff5a21137c4d2fbdcfdb4e7285b 252 SMART SM01134 72 233 9.2E-72 T 18-10-2018 CH53_1573 9125aff5a21137c4d2fbdcfdb4e7285b 252 Gene3D G3DSA:3.30.750.70 70 133 3.9E-10 T 18-10-2018 CH53_1573 9125aff5a21137c4d2fbdcfdb4e7285b 252 SUPERFAMILY SSF100950 74 233 1.22E-29 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_1573 9125aff5a21137c4d2fbdcfdb4e7285b 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 9.9E-54 T 18-10-2018 IPR014036 DeoR C-terminal sensor domain CH53_1573 9125aff5a21137c4d2fbdcfdb4e7285b 252 SMART SM00420 6 58 5.2E-27 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_1573 9125aff5a21137c4d2fbdcfdb4e7285b 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.7E-12 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_1573 9125aff5a21137c4d2fbdcfdb4e7285b 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.7E-12 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_1573 9125aff5a21137c4d2fbdcfdb4e7285b 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 18-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CH53_1573 9125aff5a21137c4d2fbdcfdb4e7285b 252 SUPERFAMILY SSF46785 3 73 1.62E-16 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_402 81462583134cadf211a3e6e62d42be61 238 Gene3D G3DSA:1.10.3720.10 7 229 8.3E-43 T 18-10-2018 IPR035906 MetI-like superfamily CH53_402 81462583134cadf211a3e6e62d42be61 238 SUPERFAMILY SSF161098 17 214 2.22E-37 T 18-10-2018 IPR035906 MetI-like superfamily CH53_402 81462583134cadf211a3e6e62d42be61 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 219 1.2E-15 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_402 81462583134cadf211a3e6e62d42be61 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 7.7E-14 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CH53_3835 b7df90b9d12eece3f91c8288e0c2f231 524 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 511 4.3E-279 T 18-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CH53_3835 b7df90b9d12eece3f91c8288e0c2f231 524 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 524 363.814 T 18-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CH53_3835 b7df90b9d12eece3f91c8288e0c2f231 524 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 512 6.3E-279 T 18-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CH53_382 c7d6a4c523ed19dc529e8ed5e0675f81 167 Gene3D G3DSA:1.20.58.1610 1 124 1.0E-42 T 18-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_382 c7d6a4c523ed19dc529e8ed5e0675f81 167 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 27 123 1.5E-31 T 18-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_382 c7d6a4c523ed19dc529e8ed5e0675f81 167 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 19.956 T 18-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 CH53_3041 6c12275bf334c866ebeb1eadf78408e5 294 SUPERFAMILY SSF53697 106 288 1.88E-40 T 18-10-2018 CH53_3041 6c12275bf334c866ebeb1eadf78408e5 294 SUPERFAMILY SSF46689 16 89 4.66E-9 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3041 6c12275bf334c866ebeb1eadf78408e5 294 Gene3D G3DSA:1.10.10.10 16 89 1.7E-8 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3041 6c12275bf334c866ebeb1eadf78408e5 294 Pfam PF01418 Helix-turn-helix domain, rpiR family 15 90 1.1E-23 T 18-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CH53_3041 6c12275bf334c866ebeb1eadf78408e5 294 Gene3D G3DSA:3.40.50.10490 105 288 4.8E-42 T 18-10-2018 CH53_3041 6c12275bf334c866ebeb1eadf78408e5 294 Pfam PF01380 SIS domain 138 266 5.3E-32 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_1299 8419e4dbd118c0c6421ec9f4e6304969 113 Gene3D G3DSA:1.10.10.10 2 72 3.3E-21 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1299 8419e4dbd118c0c6421ec9f4e6304969 113 Pfam PF02316 Mu DNA-binding domain 10 57 2.1E-11 T 18-10-2018 IPR003314 Mu-type HTH domain GO:0003677 CH53_1299 8419e4dbd118c0c6421ec9f4e6304969 113 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 6 112 0.01 T 18-10-2018 IPR010749 Protein of unknown function DUF1323 CH53_1299 8419e4dbd118c0c6421ec9f4e6304969 113 SUPERFAMILY SSF46955 3 68 9.06E-18 T 18-10-2018 IPR009061 Putative DNA-binding domain superfamily CH53_522 2d53283505f0d97793075e846a4b018e 327 Gene3D G3DSA:3.30.1400.10 185 325 6.5E-55 T 18-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 CH53_522 2d53283505f0d97793075e846a4b018e 327 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 190 316 2.2E-49 T 18-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CH53_522 2d53283505f0d97793075e846a4b018e 327 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 319 24.729 T 18-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 CH53_522 2d53283505f0d97793075e846a4b018e 327 SMART SM00771 187 317 2.4E-78 T 18-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CH53_522 2d53283505f0d97793075e846a4b018e 327 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 317 4.9E-83 T 18-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 CH53_522 2d53283505f0d97793075e846a4b018e 327 SUPERFAMILY SSF64383 188 321 7.59E-49 T 18-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 CH53_522 2d53283505f0d97793075e846a4b018e 327 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 210 324 1.0E-54 T 18-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CH53_2209 913c135b82fdff973ef9d6660e23e076 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 23.674 T 18-10-2018 IPR012451 Protein of unknown function DUF1656 CH53_2209 913c135b82fdff973ef9d6660e23e076 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 3.2E-20 T 18-10-2018 IPR012451 Protein of unknown function DUF1656 CH53_386 8c03d5ed0796234b71100033de0c7261 197 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 1 193 45.809 T 18-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 CH53_386 8c03d5ed0796234b71100033de0c7261 197 SUPERFAMILY SSF109604 2 191 8.11E-45 T 18-10-2018 CH53_386 8c03d5ed0796234b71100033de0c7261 197 Pfam PF13023 HD domain 9 159 5.5E-18 T 18-10-2018 IPR006674 HD domain CH53_386 8c03d5ed0796234b71100033de0c7261 197 SMART SM00471 24 149 4.7E-7 T 18-10-2018 IPR003607 HD/PDEase domain CH53_386 8c03d5ed0796234b71100033de0c7261 197 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 78 174 9.0E-50 T 18-10-2018 CH53_386 8c03d5ed0796234b71100033de0c7261 197 Gene3D G3DSA:1.10.3210.10 1 196 7.9E-86 T 18-10-2018 CH53_2503 6b62d2e917abba6e850eb62415a92b72 241 Gene3D G3DSA:3.40.1410.10 70 233 1.2E-39 T 18-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CH53_2503 6b62d2e917abba6e850eb62415a92b72 241 SMART SM00866 86 225 2.6E-32 T 18-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CH53_2503 6b62d2e917abba6e850eb62415a92b72 241 SMART SM00345 6 65 7.3E-23 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_2503 6b62d2e917abba6e850eb62415a92b72 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 3.0E-22 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_2503 6b62d2e917abba6e850eb62415a92b72 241 Gene3D G3DSA:1.10.10.10 1 69 4.4E-21 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2503 6b62d2e917abba6e850eb62415a92b72 241 SUPERFAMILY SSF46785 2 69 5.22E-19 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2503 6b62d2e917abba6e850eb62415a92b72 241 SUPERFAMILY SSF64288 53 232 1.02E-46 T 18-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CH53_2503 6b62d2e917abba6e850eb62415a92b72 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 7.6E-9 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_2503 6b62d2e917abba6e850eb62415a92b72 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 7.6E-9 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_2503 6b62d2e917abba6e850eb62415a92b72 241 Pfam PF07702 UTRA domain 87 224 1.7E-29 T 18-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CH53_3891 9e68700865179e2f648706eb3196cdc5 135 SUPERFAMILY SSF57933 50 101 6.02E-5 T 18-10-2018 IPR035898 TAZ domain superfamily Reactome: R-HSA-1234158|Reactome: R-HSA-1368082|Reactome: R-HSA-1912408|Reactome: R-HSA-1989781|Reactome: R-HSA-201722|Reactome: R-HSA-210744|Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862|Reactome: R-HSA-3134973|Reactome: R-HSA-3214847|Reactome: R-HSA-3371568|Reactome: R-HSA-381340|Reactome: R-HSA-3899300|Reactome: R-HSA-400253|Reactome: R-HSA-5617472|Reactome: R-HSA-5621575|Reactome: R-HSA-8866907|Reactome: R-HSA-8941856|Reactome: R-HSA-9013508|Reactome: R-HSA-9013695|Reactome: R-HSA-9018519|Reactome: R-HSA-918233|Reactome: R-HSA-933541 CH53_3891 9e68700865179e2f648706eb3196cdc5 135 Pfam PF03692 Putative zinc- or iron-chelating domain 7 98 1.5E-9 T 18-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CH53_1019 cb2b32792b8691cccc5042d3f21088e3 400 Pfam PF01098 Cell cycle protein 33 387 8.1E-123 T 18-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_1019 cb2b32792b8691cccc5042d3f21088e3 400 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 345 369 - T 18-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_1019 cb2b32792b8691cccc5042d3f21088e3 400 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 29 396 41.97 T 18-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_1019 cb2b32792b8691cccc5042d3f21088e3 400 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 31 386 4.2E-134 T 18-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_2808 bb10b922876e3899d03a59c231398eac 249 Gene3D G3DSA:2.40.10.220 117 244 1.3E-34 T 18-10-2018 CH53_2808 bb10b922876e3899d03a59c231398eac 249 Pfam PF07317 Flagellar regulator YcgR 9 112 4.0E-30 T 18-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CH53_2808 bb10b922876e3899d03a59c231398eac 249 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 4 242 29.064 T 18-10-2018 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 CH53_2808 bb10b922876e3899d03a59c231398eac 249 Gene3D G3DSA:2.30.110.10 7 115 1.0E-5 T 18-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CH53_2808 bb10b922876e3899d03a59c231398eac 249 Pfam PF07238 PilZ domain 115 233 2.1E-9 T 18-10-2018 IPR009875 PilZ domain GO:0035438 CH53_1333 57067d75a4647273cd2e8cab83999e6d 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 2.8E-201 T 18-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CH53_1333 57067d75a4647273cd2e8cab83999e6d 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 218.017 T 18-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CH53_1333 57067d75a4647273cd2e8cab83999e6d 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 18-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CH53_1333 57067d75a4647273cd2e8cab83999e6d 432 Gene3D G3DSA:3.90.170.10 267 432 3.6E-71 T 18-10-2018 CH53_1333 57067d75a4647273cd2e8cab83999e6d 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 2.7E-178 T 18-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CH53_1333 57067d75a4647273cd2e8cab83999e6d 432 Gene3D G3DSA:3.40.440.10 6 249 4.5E-106 T 18-10-2018 CH53_1333 57067d75a4647273cd2e8cab83999e6d 432 SMART SM00788 4 425 2.5E-296 T 18-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CH53_1333 57067d75a4647273cd2e8cab83999e6d 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 18-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CH53_1333 57067d75a4647273cd2e8cab83999e6d 432 Gene3D G3DSA:1.10.300.10 102 201 4.5E-106 T 18-10-2018 CH53_1333 57067d75a4647273cd2e8cab83999e6d 432 SUPERFAMILY SSF52540 3 431 2.44E-178 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2362 ea90c6437bf4fdd98a838839d8fc5245 246 SMART SM00563 67 182 3.8E-39 T 18-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CH53_2362 ea90c6437bf4fdd98a838839d8fc5245 246 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 1.9E-47 T 18-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 CH53_2362 ea90c6437bf4fdd98a838839d8fc5245 246 Pfam PF01553 Acyltransferase 59 180 9.4E-32 T 18-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CH53_2362 ea90c6437bf4fdd98a838839d8fc5245 246 SUPERFAMILY SSF69593 2 237 1.7E-62 T 18-10-2018 CH53_2728 8e921d12cd88eee3ce1f6c9eff149015 794 Gene3D G3DSA:3.10.20.310 265 346 1.0E-15 T 18-10-2018 CH53_2728 8e921d12cd88eee3ce1f6c9eff149015 794 Pfam PF01103 Surface antigen 448 794 4.0E-101 T 18-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CH53_2728 8e921d12cd88eee3ce1f6c9eff149015 794 Pfam PF07244 Surface antigen variable number repeat 92 172 2.9E-11 T 18-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CH53_2728 8e921d12cd88eee3ce1f6c9eff149015 794 Pfam PF07244 Surface antigen variable number repeat 266 344 2.2E-11 T 18-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CH53_2728 8e921d12cd88eee3ce1f6c9eff149015 794 Pfam PF07244 Surface antigen variable number repeat 176 263 3.0E-15 T 18-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CH53_2728 8e921d12cd88eee3ce1f6c9eff149015 794 Pfam PF07244 Surface antigen variable number repeat 348 421 7.4E-15 T 18-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CH53_2728 8e921d12cd88eee3ce1f6c9eff149015 794 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 794 4.4E-283 T 18-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CH53_2728 8e921d12cd88eee3ce1f6c9eff149015 794 PIRSF PIRSF006076 1 794 1.5E-253 T 18-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CH53_2728 8e921d12cd88eee3ce1f6c9eff149015 794 Gene3D G3DSA:3.10.20.310 175 264 9.4E-23 T 18-10-2018 CH53_2728 8e921d12cd88eee3ce1f6c9eff149015 794 Gene3D G3DSA:3.10.20.310 92 174 6.6E-16 T 18-10-2018 CH53_2728 8e921d12cd88eee3ce1f6c9eff149015 794 Gene3D G3DSA:3.10.20.310 19 91 2.8E-20 T 18-10-2018 CH53_2728 8e921d12cd88eee3ce1f6c9eff149015 794 Gene3D G3DSA:2.40.160.50 426 794 4.5E-144 T 18-10-2018 CH53_2728 8e921d12cd88eee3ce1f6c9eff149015 794 Gene3D G3DSA:3.10.20.310 347 425 8.8E-26 T 18-10-2018 CH53_2728 8e921d12cd88eee3ce1f6c9eff149015 794 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 794 25.989 T 18-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CH53_2805 0695c5be567f8249abc181676aa92e3d 363 Gene3D G3DSA:3.40.1190.20 56 362 5.2E-77 T 18-10-2018 IPR029056 Ribokinase-like CH53_2805 0695c5be567f8249abc181676aa92e3d 363 SUPERFAMILY SSF46785 2 55 1.09E-9 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2805 0695c5be567f8249abc181676aa92e3d 363 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 18-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CH53_2805 0695c5be567f8249abc181676aa92e3d 363 Gene3D G3DSA:1.10.10.10 2 55 1.7E-9 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2805 0695c5be567f8249abc181676aa92e3d 363 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 48 1.3E-12 T 18-10-2018 CH53_2805 0695c5be567f8249abc181676aa92e3d 363 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 303 316 - T 18-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CH53_2805 0695c5be567f8249abc181676aa92e3d 363 Pfam PF00294 pfkB family carbohydrate kinase 59 348 2.1E-61 T 18-10-2018 IPR011611 Carbohydrate kinase PfkB CH53_2805 0695c5be567f8249abc181676aa92e3d 363 SUPERFAMILY SSF53613 60 352 3.59E-60 T 18-10-2018 IPR029056 Ribokinase-like CH53_2350 dab705f80e4c821e8fe7cf0f2769b9fe 101 Gene3D G3DSA:3.30.70.100 1 101 1.5E-27 T 18-10-2018 CH53_2350 dab705f80e4c821e8fe7cf0f2769b9fe 101 SUPERFAMILY SSF54909 1 98 4.54E-29 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_2350 dab705f80e4c821e8fe7cf0f2769b9fe 101 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 84 3.8E-17 T 18-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CH53_547 ec19291252b7f968007eb226960a0829 137 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 3 136 7.0E-43 T 18-10-2018 IPR016052 Bacteriophage 933W, L0136 CH53_547 ec19291252b7f968007eb226960a0829 137 Gene3D G3DSA:2.40.50.200 27 137 7.9E-43 T 18-10-2018 IPR036700 Bacterial OB-fold superfamily CH53_547 ec19291252b7f968007eb226960a0829 137 Pfam PF04076 Bacterial OB fold (BOF) protein 30 135 2.3E-36 T 18-10-2018 IPR005220 Bacterial OB-fold CH53_547 ec19291252b7f968007eb226960a0829 137 SUPERFAMILY SSF101756 39 135 6.41E-36 T 18-10-2018 IPR036700 Bacterial OB-fold superfamily CH53_705 63c491544a92a394316b0b89f7f508f0 88 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 7 87 5.0E-27 T 18-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 CH53_705 63c491544a92a394316b0b89f7f508f0 88 Pfam PF10963 Phage tail assembly chaperone 7 88 2.3E-32 T 18-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 CH53_1984 a098256e874fb2fca045ba2d6a577c52 463 Gene3D G3DSA:1.20.1740.10 11 461 4.3E-54 T 18-10-2018 CH53_1984 a098256e874fb2fca045ba2d6a577c52 463 PIRSF PIRSF006060 1 463 5.2E-64 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_1984 a098256e874fb2fca045ba2d6a577c52 463 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 18-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CH53_1984 a098256e874fb2fca045ba2d6a577c52 463 Pfam PF00324 Amino acid permease 18 430 3.2E-103 T 18-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CH53_501 3431a8f817203a9cd6538a9c895a1bbd 566 Pfam PF06580 Histidine kinase 359 437 7.7E-25 T 18-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CH53_501 3431a8f817203a9cd6538a9c895a1bbd 566 SMART SM00387 451 553 2.7E-7 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_501 3431a8f817203a9cd6538a9c895a1bbd 566 Gene3D G3DSA:1.10.1760.20 44 204 4.8E-11 T 18-10-2018 CH53_501 3431a8f817203a9cd6538a9c895a1bbd 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 455 550 1.1E-7 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_501 3431a8f817203a9cd6538a9c895a1bbd 566 Pfam PF07694 5TMR of 5TMR-LYT 28 193 2.0E-46 T 18-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CH53_501 3431a8f817203a9cd6538a9c895a1bbd 566 Gene3D G3DSA:3.30.450.40 230 378 2.9E-5 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_501 3431a8f817203a9cd6538a9c895a1bbd 566 Gene3D G3DSA:3.30.565.10 411 556 3.0E-17 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_501 3431a8f817203a9cd6538a9c895a1bbd 566 SUPERFAMILY SSF55874 413 549 6.29E-17 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_501 3431a8f817203a9cd6538a9c895a1bbd 566 SUPERFAMILY SSF55781 226 345 6.17E-6 T 18-10-2018 CH53_2774 1f1368e3eb9dbd5baf9e5d64ecd2cc95 386 Pfam PF00155 Aminotransferase class I and II 32 383 2.3E-62 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_2774 1f1368e3eb9dbd5baf9e5d64ecd2cc95 386 SUPERFAMILY SSF53383 9 385 1.46E-99 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_2774 1f1368e3eb9dbd5baf9e5d64ecd2cc95 386 Gene3D G3DSA:3.40.640.10 45 284 2.3E-142 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_2774 1f1368e3eb9dbd5baf9e5d64ecd2cc95 386 Gene3D G3DSA:3.90.1150.10 20 383 2.3E-142 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_4141 499b8d27990b1743efc2d46de4907076 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 2.3E-53 T 18-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CH53_4141 499b8d27990b1743efc2d46de4907076 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.029 T 18-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CH53_4141 499b8d27990b1743efc2d46de4907076 98 SUPERFAMILY SSF47729 3 93 1.77E-31 T 18-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CH53_4141 499b8d27990b1743efc2d46de4907076 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 9.9E-31 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_4141 499b8d27990b1743efc2d46de4907076 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_4141 499b8d27990b1743efc2d46de4907076 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_4141 499b8d27990b1743efc2d46de4907076 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_4141 499b8d27990b1743efc2d46de4907076 98 Gene3D G3DSA:4.10.520.10 1 98 1.1E-37 T 18-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CH53_4141 499b8d27990b1743efc2d46de4907076 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 18-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CH53_4141 499b8d27990b1743efc2d46de4907076 98 SMART SM00411 3 92 2.2E-42 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CH53_111 3972c309fe22e4e35e09b480e45d65e1 150 Pfam PF03733 Inner membrane component domain 77 127 6.8E-19 T 18-10-2018 IPR005185 Inner membrane component domain CH53_111 3972c309fe22e4e35e09b480e45d65e1 150 Pfam PF03733 Inner membrane component domain 4 53 1.5E-9 T 18-10-2018 IPR005185 Inner membrane component domain CH53_111 3972c309fe22e4e35e09b480e45d65e1 150 PIRSF PIRSF028777 1 139 1.1E-54 T 18-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 CH53_592 f8c68c425824494276be2dfbd37105b6 689 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 1.3E-31 T 18-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CH53_592 f8c68c425824494276be2dfbd37105b6 689 SUPERFAMILY SSF140356 3 105 1.57E-34 T 18-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 CH53_592 f8c68c425824494276be2dfbd37105b6 689 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.269 T 18-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CH53_592 f8c68c425824494276be2dfbd37105b6 689 Gene3D G3DSA:3.30.870.10 500 686 4.5E-72 T 18-10-2018 CH53_592 f8c68c425824494276be2dfbd37105b6 689 Pfam PF02503 Polyphosphate kinase middle domain 119 320 9.1E-43 T 18-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CH53_592 f8c68c425824494276be2dfbd37105b6 689 Gene3D G3DSA:3.30.1840.10 110 307 2.4E-75 T 18-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 CH53_592 f8c68c425824494276be2dfbd37105b6 689 SUPERFAMILY SSF56024 315 497 2.42E-55 T 18-10-2018 CH53_592 f8c68c425824494276be2dfbd37105b6 689 SUPERFAMILY SSF143724 107 312 7.06E-60 T 18-10-2018 CH53_592 f8c68c425824494276be2dfbd37105b6 689 Gene3D G3DSA:3.30.870.10 317 499 6.2E-74 T 18-10-2018 CH53_592 f8c68c425824494276be2dfbd37105b6 689 Gene3D G3DSA:1.20.58.310 9 109 5.1E-38 T 18-10-2018 CH53_592 f8c68c425824494276be2dfbd37105b6 689 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 6.5E-258 T 18-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CH53_592 f8c68c425824494276be2dfbd37105b6 689 SUPERFAMILY SSF56024 500 682 5.61E-69 T 18-10-2018 CH53_592 f8c68c425824494276be2dfbd37105b6 689 PIRSF PIRSF015589 1 688 5.0E-243 T 18-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CH53_592 f8c68c425824494276be2dfbd37105b6 689 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 6.9E-144 T 18-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CH53_1116 d2d4c89cf5466f7744469d7c08f6e458 407 Pfam PF01676 Metalloenzyme superfamily 2 398 4.0E-44 T 18-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CH53_1116 d2d4c89cf5466f7744469d7c08f6e458 407 SUPERFAMILY SSF143856 117 235 1.31E-50 T 18-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CH53_1116 d2d4c89cf5466f7744469d7c08f6e458 407 Gene3D G3DSA:3.30.70.1250 115 238 3.6E-157 T 18-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CH53_1116 d2d4c89cf5466f7744469d7c08f6e458 407 SUPERFAMILY SSF53649 1 407 9.71E-74 T 18-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CH53_1116 d2d4c89cf5466f7744469d7c08f6e458 407 PIRSF PIRSF001491 1 407 5.6E-167 T 18-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CH53_1116 d2d4c89cf5466f7744469d7c08f6e458 407 Gene3D G3DSA:3.40.720.10 3 406 3.6E-157 T 18-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CH53_1116 d2d4c89cf5466f7744469d7c08f6e458 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 56.128 T 18-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CH53_1116 d2d4c89cf5466f7744469d7c08f6e458 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 404 1.6E-195 T 18-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CH53_4031 7ece74d049d19d2f44150c48ebcd8038 434 Gene3D G3DSA:3.30.565.10 275 428 6.7E-32 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_4031 7ece74d049d19d2f44150c48ebcd8038 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 423 1.4E-19 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_4031 7ece74d049d19d2f44150c48ebcd8038 434 SMART SM00388 211 271 4.2E-5 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_4031 7ece74d049d19d2f44150c48ebcd8038 434 SMART SM00304 158 210 5.0E-4 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_4031 7ece74d049d19d2f44150c48ebcd8038 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 1.7E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_4031 7ece74d049d19d2f44150c48ebcd8038 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 1.7E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_4031 7ece74d049d19d2f44150c48ebcd8038 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.7E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_4031 7ece74d049d19d2f44150c48ebcd8038 434 SUPERFAMILY SSF47384 194 271 1.14E-9 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_4031 7ece74d049d19d2f44150c48ebcd8038 434 SMART SM00387 315 425 2.0E-32 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_4031 7ece74d049d19d2f44150c48ebcd8038 434 SUPERFAMILY SSF55874 260 423 2.62E-37 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_4031 7ece74d049d19d2f44150c48ebcd8038 434 Gene3D G3DSA:1.10.287.130 162 272 4.2E-19 T 18-10-2018 CH53_744 9d9a4279d5d894b60106643882819fba 111 Gene3D G3DSA:3.90.1150.40 1 111 2.6E-56 T 18-10-2018 CH53_744 9d9a4279d5d894b60106643882819fba 111 SUPERFAMILY SSF159894 1 111 8.63E-58 T 18-10-2018 CH53_744 9d9a4279d5d894b60106643882819fba 111 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 1.7E-59 T 18-10-2018 IPR018994 Protein of unknown function DUF2002 CH53_672 41cfd5e9e377af99bdc7dc6f4de448d9 234 Gene3D G3DSA:1.20.1440.100 43 116 1.3E-12 T 18-10-2018 CH53_672 41cfd5e9e377af99bdc7dc6f4de448d9 234 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 25 234 1.8E-126 T 18-10-2018 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CH53_672 41cfd5e9e377af99bdc7dc6f4de448d9 234 Pfam PF12710 haloacid dehalogenase-like hydrolase 32 215 1.3E-12 T 18-10-2018 CH53_672 41cfd5e9e377af99bdc7dc6f4de448d9 234 SUPERFAMILY SSF56784 29 218 6.94E-10 T 18-10-2018 IPR036412 HAD-like superfamily CH53_672 41cfd5e9e377af99bdc7dc6f4de448d9 234 Gene3D G3DSA:3.40.50.1000 32 232 1.3E-12 T 18-10-2018 IPR023214 HAD superfamily CH53_886 0b35b48b1f7428538983bbe1b0d46436 268 Gene3D G3DSA:3.10.129.10 2 114 3.4E-13 T 18-10-2018 CH53_886 0b35b48b1f7428538983bbe1b0d46436 268 Pfam PF01575 MaoC like domain 7 81 6.1E-6 T 18-10-2018 IPR002539 MaoC-like dehydratase domain CH53_886 0b35b48b1f7428538983bbe1b0d46436 268 SUPERFAMILY SSF54637 5 92 4.47E-12 T 18-10-2018 IPR029069 HotDog domain superfamily CH53_2533 584bbf0ca02270019bb45ad8779541d2 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 129 184 3.7E-9 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2533 584bbf0ca02270019bb45ad8779541d2 200 SUPERFAMILY SSF46894 126 187 2.48E-10 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_2533 584bbf0ca02270019bb45ad8779541d2 200 SMART SM00421 127 184 1.5E-7 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2533 584bbf0ca02270019bb45ad8779541d2 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 130 144 3.1E-5 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2533 584bbf0ca02270019bb45ad8779541d2 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 172 3.1E-5 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2533 584bbf0ca02270019bb45ad8779541d2 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 160 3.1E-5 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2533 584bbf0ca02270019bb45ad8779541d2 200 Gene3D G3DSA:1.10.10.10 123 189 5.4E-10 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_888 c7807dee46f8ce9b6462f954ab699c10 455 SUPERFAMILY SSF56954 2 445 1.44E-86 T 18-10-2018 CH53_888 c7807dee46f8ce9b6462f954ab699c10 455 Gene3D G3DSA:1.20.1600.10 42 443 1.6E-98 T 18-10-2018 CH53_888 c7807dee46f8ce9b6462f954ab699c10 455 Gene3D G3DSA:2.20.200.10 88 332 1.6E-98 T 18-10-2018 CH53_888 c7807dee46f8ce9b6462f954ab699c10 455 Pfam PF02321 Outer membrane efflux protein 51 235 2.7E-23 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CH53_888 c7807dee46f8ce9b6462f954ab699c10 455 Pfam PF02321 Outer membrane efflux protein 263 441 1.9E-19 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CH53_888 c7807dee46f8ce9b6462f954ab699c10 455 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 2 443 7.3E-80 T 18-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 CH53_1838 98313f41c018343a4ef82e70844213ad 321 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 79 274 2.0E-21 T 18-10-2018 IPR000477 Reverse transcriptase domain CH53_1838 98313f41c018343a4ef82e70844213ad 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 265 271 3.3E-21 T 18-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CH53_1838 98313f41c018343a4ef82e70844213ad 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 134 152 3.3E-21 T 18-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CH53_1838 98313f41c018343a4ef82e70844213ad 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 153 163 3.3E-21 T 18-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CH53_1838 98313f41c018343a4ef82e70844213ad 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 214 225 3.3E-21 T 18-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CH53_1838 98313f41c018343a4ef82e70844213ad 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 181 194 3.3E-21 T 18-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CH53_1838 98313f41c018343a4ef82e70844213ad 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 199 212 3.3E-21 T 18-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CH53_1838 98313f41c018343a4ef82e70844213ad 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 73 86 3.3E-21 T 18-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CH53_1838 98313f41c018343a4ef82e70844213ad 321 SUPERFAMILY SSF56672 69 240 1.11E-9 T 18-10-2018 CH53_2140 9f1b8c981a260d0b246ba6d0b2490dfb 135 Hamap MF_01048 Protein PsiE [psiE]. 1 135 25.773 T 18-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 CH53_2140 9f1b8c981a260d0b246ba6d0b2490dfb 135 PIRSF PIRSF029598 1 135 9.2E-48 T 18-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 CH53_2140 9f1b8c981a260d0b246ba6d0b2490dfb 135 Pfam PF06146 Phosphate-starvation-inducible E 60 122 2.2E-15 T 18-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like CH53_376 80cd29b99b4c7b8274f235bf2d69e94c 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 18-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_376 80cd29b99b4c7b8274f235bf2d69e94c 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 18-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_376 80cd29b99b4c7b8274f235bf2d69e94c 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 23.927 T 18-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_376 80cd29b99b4c7b8274f235bf2d69e94c 325 Pfam PF00146 NADH dehydrogenase 17 316 2.0E-120 T 18-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_857 8c0716d82548ccb6e4172090b712b825 420 Gene3D G3DSA:3.40.50.2300 41 368 2.2E-114 T 18-10-2018 CH53_857 8c0716d82548ccb6e4172090b712b825 420 SUPERFAMILY SSF53822 38 387 9.16E-95 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_857 8c0716d82548ccb6e4172090b712b825 420 Pfam PF13458 Periplasmic binding protein 38 377 2.0E-82 T 18-10-2018 IPR028081 Leucine-binding protein domain CH53_857 8c0716d82548ccb6e4172090b712b825 420 TIGRFAM TIGR03669 urea_ABC_arch: urea ABC transporter, substrate-binding protein 39 413 3.5E-184 T 18-10-2018 IPR019968 Urea ABC transporter, substrate-binding protein CH53_857 8c0716d82548ccb6e4172090b712b825 420 Gene3D G3DSA:3.40.50.2300 154 383 2.2E-114 T 18-10-2018 CH53_780 08ed17e82bb58337274a79bcd81c1e7a 115 SUPERFAMILY SSF54637 12 107 4.72E-18 T 18-10-2018 IPR029069 HotDog domain superfamily CH53_780 08ed17e82bb58337274a79bcd81c1e7a 115 Pfam PF07977 FabA-like domain 26 102 1.3E-6 T 18-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CH53_780 08ed17e82bb58337274a79bcd81c1e7a 115 Gene3D G3DSA:3.10.129.10 3 115 1.3E-33 T 18-10-2018 CH53_780 08ed17e82bb58337274a79bcd81c1e7a 115 PIRSF PIRSF030962 1 115 3.8E-37 T 18-10-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CH53_2097 ddc000889914beaff3dffee5696e79da 376 Pfam PF04055 Radical SAM superfamily 83 220 1.5E-9 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_2097 ddc000889914beaff3dffee5696e79da 376 Gene3D G3DSA:3.20.20.70 13 367 4.8E-106 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2097 ddc000889914beaff3dffee5696e79da 376 SMART SM00876 259 362 1.7E-31 T 18-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CH53_2097 ddc000889914beaff3dffee5696e79da 376 SUPERFAMILY SSF102114 39 364 1.96E-54 T 18-10-2018 CH53_2097 ddc000889914beaff3dffee5696e79da 376 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 5 369 5.2E-165 T 18-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 CH53_2097 ddc000889914beaff3dffee5696e79da 376 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 259 361 1.8E-23 T 18-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CH53_160 7fc8ee920434e8a42b4e158e5986da64 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 18-10-2018 IPR024002 Formate/nitrite transporter, conserved site CH53_160 7fc8ee920434e8a42b4e158e5986da64 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 1.5E-93 T 18-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 CH53_160 7fc8ee920434e8a42b4e158e5986da64 285 Pfam PF01226 Formate/nitrite transporter 15 276 7.3E-76 T 18-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 CH53_160 7fc8ee920434e8a42b4e158e5986da64 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 1.9E-129 T 18-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 CH53_160 7fc8ee920434e8a42b4e158e5986da64 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 18-10-2018 IPR024002 Formate/nitrite transporter, conserved site CH53_160 7fc8ee920434e8a42b4e158e5986da64 285 Gene3D G3DSA:1.20.1080.10 1 268 3.1E-104 T 18-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CH53_3749 935f5c80cbbf7f71e960d0cbff1a4757 413 Pfam PF07690 Major Facilitator Superfamily 37 373 4.5E-36 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_3749 935f5c80cbbf7f71e960d0cbff1a4757 413 SUPERFAMILY SSF103473 32 399 5.36E-48 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_3749 935f5c80cbbf7f71e960d0cbff1a4757 413 Gene3D G3DSA:1.20.1250.20 31 410 4.2E-49 T 18-10-2018 CH53_3317 f1333c9def3a6ed29d516af7306a3a84 235 Pfam PF00483 Nucleotidyl transferase 41 175 1.8E-4 T 18-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CH53_3317 f1333c9def3a6ed29d516af7306a3a84 235 SUPERFAMILY SSF53448 1 218 7.51E-13 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_3317 f1333c9def3a6ed29d516af7306a3a84 235 PIRSF PIRSF028162 1 234 6.6E-57 T 18-10-2018 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted CH53_3317 f1333c9def3a6ed29d516af7306a3a84 235 Gene3D G3DSA:3.90.550.10 3 235 1.9E-37 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_1306 44ca6f665f19948e17c9824b0b54e263 461 SUPERFAMILY SSF53623 95 308 4.71E-50 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CH53_1306 44ca6f665f19948e17c9824b0b54e263 461 Gene3D G3DSA:3.90.190.20 314 451 1.5E-29 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CH53_1306 44ca6f665f19948e17c9824b0b54e263 461 SUPERFAMILY SSF53244 312 449 3.92E-36 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CH53_1306 44ca6f665f19948e17c9824b0b54e263 461 Gene3D G3DSA:3.40.50.720 1 90 4.4E-35 T 18-10-2018 CH53_1306 44ca6f665f19948e17c9824b0b54e263 461 Gene3D G3DSA:3.40.1190.10 91 313 2.1E-52 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CH53_1306 44ca6f665f19948e17c9824b0b54e263 461 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 1.9E-9 T 18-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CH53_1306 44ca6f665f19948e17c9824b0b54e263 461 Pfam PF08245 Mur ligase middle domain 108 291 3.3E-18 T 18-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CH53_1306 44ca6f665f19948e17c9824b0b54e263 461 SUPERFAMILY SSF51984 1 90 1.57E-23 T 18-10-2018 CH53_1306 44ca6f665f19948e17c9824b0b54e263 461 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.296 T 18-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 CH53_1306 44ca6f665f19948e17c9824b0b54e263 461 Pfam PF01225 Mur ligase family, catalytic domain 2 98 9.3E-19 T 18-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CH53_1306 44ca6f665f19948e17c9824b0b54e263 461 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 7.0E-259 T 18-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 CH53_1679 1808e09b08f811759c1594bff9473dc5 323 Gene3D G3DSA:3.30.70.20 18 164 1.3E-101 T 18-10-2018 CH53_1679 1808e09b08f811759c1594bff9473dc5 323 Gene3D G3DSA:3.30.70.20 28 229 1.3E-101 T 18-10-2018 CH53_1679 1808e09b08f811759c1594bff9473dc5 323 PIRSF PIRSF036298 1 314 1.8E-166 T 18-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 CH53_1679 1808e09b08f811759c1594bff9473dc5 323 SUPERFAMILY SSF54862 28 274 1.36E-69 T 18-10-2018 CH53_1679 1808e09b08f811759c1594bff9473dc5 323 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 135 146 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_1679 1808e09b08f811759c1594bff9473dc5 323 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 2.7E-141 T 18-10-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 CH53_1679 1808e09b08f811759c1594bff9473dc5 323 Pfam PF13247 4Fe-4S dicluster domain 94 190 8.8E-25 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_1679 1808e09b08f811759c1594bff9473dc5 323 Pfam PF09163 Formate dehydrogenase N, transmembrane 248 290 5.2E-22 T 18-10-2018 IPR015246 Formate dehydrogenase, transmembrane CH53_1679 1808e09b08f811759c1594bff9473dc5 323 Gene3D G3DSA:1.20.5.480 249 296 2.3E-25 T 18-10-2018 IPR038384 Formate dehydrogenase, C-terminal domain superfamily CH53_93 dec3f9eda40d85dd54ff4adc22e6a835 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 239 4.4E-15 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_93 dec3f9eda40d85dd54ff4adc22e6a835 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 28 149 1.1E-38 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_93 dec3f9eda40d85dd54ff4adc22e6a835 246 Gene3D G3DSA:2.60.40.10 29 150 2.4E-38 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_93 dec3f9eda40d85dd54ff4adc22e6a835 246 PRINTS PR00969 Pili chaperone signature 170 185 1.3E-23 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_93 dec3f9eda40d85dd54ff4adc22e6a835 246 PRINTS PR00969 Pili chaperone signature 77 98 1.3E-23 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_93 dec3f9eda40d85dd54ff4adc22e6a835 246 PRINTS PR00969 Pili chaperone signature 131 146 1.3E-23 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_93 dec3f9eda40d85dd54ff4adc22e6a835 246 PRINTS PR00969 Pili chaperone signature 28 37 1.3E-23 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_93 dec3f9eda40d85dd54ff4adc22e6a835 246 PRINTS PR00969 Pili chaperone signature 105 122 1.3E-23 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_93 dec3f9eda40d85dd54ff4adc22e6a835 246 SUPERFAMILY SSF49584 151 243 9.94E-15 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_93 dec3f9eda40d85dd54ff4adc22e6a835 246 Gene3D G3DSA:2.60.40.10 154 246 7.5E-21 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_93 dec3f9eda40d85dd54ff4adc22e6a835 246 SUPERFAMILY SSF49354 24 149 1.07E-37 T 18-10-2018 IPR008962 PapD-like superfamily CH53_1701 1b4abd55da39f9f997ae9ce628d7584b 219 Pfam PF00691 OmpA family 115 210 2.9E-21 T 18-10-2018 IPR006665 OmpA-like domain CH53_1701 1b4abd55da39f9f997ae9ce628d7584b 219 SUPERFAMILY SSF103088 103 218 1.44E-36 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_1701 1b4abd55da39f9f997ae9ce628d7584b 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 1.3E-6 T 18-10-2018 CH53_1701 1b4abd55da39f9f997ae9ce628d7584b 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 1.3E-6 T 18-10-2018 CH53_1701 1b4abd55da39f9f997ae9ce628d7584b 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 132 158 1.3E-6 T 18-10-2018 CH53_1701 1b4abd55da39f9f997ae9ce628d7584b 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 1.3E-6 T 18-10-2018 CH53_1701 1b4abd55da39f9f997ae9ce628d7584b 219 PRINTS PR01021 OMPA domain signature 146 161 1.4E-13 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CH53_1701 1b4abd55da39f9f997ae9ce628d7584b 219 PRINTS PR01021 OMPA domain signature 116 138 1.4E-13 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CH53_1701 1b4abd55da39f9f997ae9ce628d7584b 219 PRINTS PR01021 OMPA domain signature 161 177 1.4E-13 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CH53_1701 1b4abd55da39f9f997ae9ce628d7584b 219 Gene3D G3DSA:3.30.1330.60 79 219 7.6E-52 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_1701 1b4abd55da39f9f997ae9ce628d7584b 219 Pfam PF13488 Glycine zipper 38 85 1.9E-11 T 18-10-2018 IPR039567 Glycine zipper domain CH53_1559 adf93eaeff65e676023eaa9146cd8c44 165 Gene3D G3DSA:3.10.50.30 79 158 2.0E-31 T 18-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 CH53_1559 adf93eaeff65e676023eaa9146cd8c44 165 SUPERFAMILY SSF54534 81 156 1.31E-22 T 18-10-2018 CH53_1559 adf93eaeff65e676023eaa9146cd8c44 165 Hamap MF_00930 Transcription elongation factor GreB [greB]. 2 157 52.339 T 18-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CH53_1559 adf93eaeff65e676023eaa9146cd8c44 165 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 5.3E-24 T 18-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CH53_1559 adf93eaeff65e676023eaa9146cd8c44 165 SUPERFAMILY SSF46557 4 79 2.35E-26 T 18-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CH53_1559 adf93eaeff65e676023eaa9146cd8c44 165 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 4.5E-26 T 18-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CH53_1559 adf93eaeff65e676023eaa9146cd8c44 165 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 155 28.435 T 18-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CH53_1559 adf93eaeff65e676023eaa9146cd8c44 165 PIRSF PIRSF006092 1 158 9.4E-61 T 18-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CH53_1559 adf93eaeff65e676023eaa9146cd8c44 165 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 18-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CH53_1559 adf93eaeff65e676023eaa9146cd8c44 165 Gene3D G3DSA:1.10.287.180 2 77 4.6E-29 T 18-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CH53_1559 adf93eaeff65e676023eaa9146cd8c44 165 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 4 157 4.3E-71 T 18-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CH53_32 e74b953bf4bf076d050507691b71a381 414 Gene3D G3DSA:1.20.1250.20 209 414 3.3E-29 T 18-10-2018 CH53_32 e74b953bf4bf076d050507691b71a381 414 SUPERFAMILY SSF103473 9 399 1.92E-72 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_32 e74b953bf4bf076d050507691b71a381 414 Hamap MF_01528 Multidrug resistance protein MdtG [mdtG]. 1 404 46.361 T 18-10-2018 IPR023692 Multidrug resistance protein MdtG GO:0005215|GO:0005886 CH53_32 e74b953bf4bf076d050507691b71a381 414 Gene3D G3DSA:1.20.1250.20 10 196 2.1E-38 T 18-10-2018 CH53_32 e74b953bf4bf076d050507691b71a381 414 PRINTS PR01035 Tetracycline resistance protein signature 346 369 9.6E-12 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CH53_32 e74b953bf4bf076d050507691b71a381 414 PRINTS PR01035 Tetracycline resistance protein signature 112 133 9.6E-12 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CH53_32 e74b953bf4bf076d050507691b71a381 414 PRINTS PR01035 Tetracycline resistance protein signature 311 331 9.6E-12 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CH53_32 e74b953bf4bf076d050507691b71a381 414 PRINTS PR01035 Tetracycline resistance protein signature 85 109 9.6E-12 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CH53_32 e74b953bf4bf076d050507691b71a381 414 PRINTS PR01035 Tetracycline resistance protein signature 23 39 9.6E-12 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CH53_32 e74b953bf4bf076d050507691b71a381 414 PRINTS PR01035 Tetracycline resistance protein signature 142 164 9.6E-12 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CH53_32 e74b953bf4bf076d050507691b71a381 414 Pfam PF07690 Major Facilitator Superfamily 18 248 1.5E-37 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_932 82835442415c4bfb981bf4b0ec5bbd38 262 SUPERFAMILY SSF53850 1 249 3.49E-64 T 18-10-2018 CH53_932 82835442415c4bfb981bf4b0ec5bbd38 262 SMART SM00062 27 250 5.6E-58 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_932 82835442415c4bfb981bf4b0ec5bbd38 262 SMART SM00079 27 249 6.0E-5 T 18-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CH53_932 82835442415c4bfb981bf4b0ec5bbd38 262 Gene3D G3DSA:3.40.190.10 112 209 5.6E-66 T 18-10-2018 CH53_932 82835442415c4bfb981bf4b0ec5bbd38 262 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 248 7.1E-61 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_932 82835442415c4bfb981bf4b0ec5bbd38 262 Gene3D G3DSA:3.40.190.10 30 246 5.6E-66 T 18-10-2018 CH53_2165 0965a4d80cb7ee80ae1aabb79ff8211a 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 74 2.7E-16 T 18-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CH53_2165 0965a4d80cb7ee80ae1aabb79ff8211a 222 Gene3D G3DSA:3.40.30.10 1 83 1.8E-37 T 18-10-2018 CH53_2165 0965a4d80cb7ee80ae1aabb79ff8211a 222 SUPERFAMILY SSF47616 84 215 2.65E-22 T 18-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CH53_2165 0965a4d80cb7ee80ae1aabb79ff8211a 222 SUPERFAMILY SSF52833 2 78 2.24E-21 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_2165 0965a4d80cb7ee80ae1aabb79ff8211a 222 Pfam PF14497 Glutathione S-transferase, C-terminal domain 138 209 1.1E-7 T 18-10-2018 IPR004046 Glutathione S-transferase, C-terminal CH53_2165 0965a4d80cb7ee80ae1aabb79ff8211a 222 Gene3D G3DSA:1.20.1050.10 86 212 3.6E-27 T 18-10-2018 CH53_3023 6f062b8889e9c9cb0e78fbdab26108d9 368 Gene3D G3DSA:1.10.287.470 94 159 6.7E-59 T 18-10-2018 CH53_3023 6f062b8889e9c9cb0e78fbdab26108d9 368 Gene3D G3DSA:2.40.30.170 46 280 6.7E-59 T 18-10-2018 CH53_3023 6f062b8889e9c9cb0e78fbdab26108d9 368 Gene3D G3DSA:2.40.420.20 41 352 6.7E-59 T 18-10-2018 CH53_3023 6f062b8889e9c9cb0e78fbdab26108d9 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 261 9.1E-14 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH53_3023 6f062b8889e9c9cb0e78fbdab26108d9 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 355 2.7E-61 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CH53_3023 6f062b8889e9c9cb0e78fbdab26108d9 368 Gene3D G3DSA:2.40.50.100 60 206 6.7E-59 T 18-10-2018 CH53_3023 6f062b8889e9c9cb0e78fbdab26108d9 368 SUPERFAMILY SSF111369 51 261 3.66E-20 T 18-10-2018 CH53_1015 e19860a7fc767c8de1e94811fabb2fee 285 Pfam PF08478 POTRA domain, FtsQ-type 57 126 2.9E-22 T 18-10-2018 IPR013685 POTRA domain, FtsQ-type CH53_1015 e19860a7fc767c8de1e94811fabb2fee 285 Pfam PF03799 Cell division protein FtsQ 130 244 4.2E-26 T 18-10-2018 IPR005548 Cell division protein FtsQ/DivIB CH53_1015 e19860a7fc767c8de1e94811fabb2fee 285 Gene3D G3DSA:3.10.20.310 58 126 2.5E-33 T 18-10-2018 CH53_1015 e19860a7fc767c8de1e94811fabb2fee 285 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 26 252 24.862 T 18-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 CH53_1015 e19860a7fc767c8de1e94811fabb2fee 285 Gene3D G3DSA:3.40.50.11690 127 259 4.4E-50 T 18-10-2018 CH53_270 9c0d75b35ca7e3680c1e5d73f92a2ab5 75 PIRSF PIRSF006188 1 72 7.2E-33 T 18-10-2018 IPR009857 Uncharacterised protein family UPF0352 CH53_270 9c0d75b35ca7e3680c1e5d73f92a2ab5 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 4.8E-23 T 18-10-2018 IPR009857 Uncharacterised protein family UPF0352 CH53_270 9c0d75b35ca7e3680c1e5d73f92a2ab5 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 5.0E-30 T 18-10-2018 IPR009857 Uncharacterised protein family UPF0352 CH53_270 9c0d75b35ca7e3680c1e5d73f92a2ab5 75 SUPERFAMILY SSF158651 1 75 1.96E-30 T 18-10-2018 IPR023202 YejL-like superfamily CH53_270 9c0d75b35ca7e3680c1e5d73f92a2ab5 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 22.436 T 18-10-2018 IPR009857 Uncharacterised protein family UPF0352 CH53_270 9c0d75b35ca7e3680c1e5d73f92a2ab5 75 Gene3D G3DSA:1.10.3390.10 1 75 2.5E-33 T 18-10-2018 IPR023202 YejL-like superfamily CH53_3989 da6509189595e1e492bbf472a06b803d 479 SMART SM00849 34 227 1.3E-29 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_3989 da6509189595e1e492bbf472a06b803d 479 Gene3D G3DSA:3.40.50.360 253 395 6.5E-39 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_3989 da6509189595e1e492bbf472a06b803d 479 Hamap MF_01312 Anaerobic nitric oxide reductase flavorubredoxin [norV]. 1 479 81.633 T 18-10-2018 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin GO:0005506|GO:0016966 CH53_3989 da6509189595e1e492bbf472a06b803d 479 PRINTS PR00163 Rubredoxin signature 430 446 4.4E-6 T 18-10-2018 IPR024935 Rubredoxin domain GO:0005506 CH53_3989 da6509189595e1e492bbf472a06b803d 479 PRINTS PR00163 Rubredoxin signature 460 476 4.4E-6 T 18-10-2018 IPR024935 Rubredoxin domain GO:0005506 CH53_3989 da6509189595e1e492bbf472a06b803d 479 Pfam PF00753 Metallo-beta-lactamase superfamily 34 172 7.8E-9 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_3989 da6509189595e1e492bbf472a06b803d 479 SUPERFAMILY SSF52218 251 394 1.4E-35 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_3989 da6509189595e1e492bbf472a06b803d 479 SUPERFAMILY SSF57802 431 478 1.53E-15 T 18-10-2018 CH53_3989 da6509189595e1e492bbf472a06b803d 479 Gene3D G3DSA:2.20.28.10 428 479 9.7E-20 T 18-10-2018 CH53_3989 da6509189595e1e492bbf472a06b803d 479 PIRSF PIRSF005243 1 399 1.3E-161 T 18-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 CH53_3989 da6509189595e1e492bbf472a06b803d 479 Gene3D G3DSA:3.60.15.10 1 247 1.9E-106 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_3989 da6509189595e1e492bbf472a06b803d 479 Pfam PF00258 Flavodoxin 256 389 4.7E-11 T 18-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CH53_3989 da6509189595e1e492bbf472a06b803d 479 Pfam PF00301 Rubredoxin 431 476 3.9E-18 T 18-10-2018 IPR024935 Rubredoxin domain GO:0005506 CH53_3989 da6509189595e1e492bbf472a06b803d 479 SUPERFAMILY SSF56281 8 285 4.19E-50 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_2844 30cf6dc7d9fd35f936134962e18c4268 306 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 88 104 - T 18-10-2018 IPR033749 Polyprenyl synthetase, conserved site CH53_2844 30cf6dc7d9fd35f936134962e18c4268 306 Gene3D G3DSA:1.10.600.10 8 306 1.8E-107 T 18-10-2018 IPR008949 Isoprenoid synthase domain superfamily CH53_2844 30cf6dc7d9fd35f936134962e18c4268 306 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 222 234 - T 18-10-2018 IPR033749 Polyprenyl synthetase, conserved site CH53_2844 30cf6dc7d9fd35f936134962e18c4268 306 SUPERFAMILY SSF48576 9 289 5.14E-88 T 18-10-2018 IPR008949 Isoprenoid synthase domain superfamily CH53_2844 30cf6dc7d9fd35f936134962e18c4268 306 Pfam PF00348 Polyprenyl synthetase 39 273 2.3E-58 T 18-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 CH53_1677 613165bdb4a624980050cf54e8857405 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 308 49.522 T 18-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CH53_1677 613165bdb4a624980050cf54e8857405 309 Gene3D G3DSA:3.90.1670.10 26 309 1.1E-90 T 18-10-2018 IPR024064 FdhE-like superfamily CH53_1677 613165bdb4a624980050cf54e8857405 309 PIRSF PIRSF018296 1 309 2.2E-133 T 18-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CH53_1677 613165bdb4a624980050cf54e8857405 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 23 306 1.4E-112 T 18-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CH53_1677 613165bdb4a624980050cf54e8857405 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 307 1.3E-118 T 18-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CH53_1677 613165bdb4a624980050cf54e8857405 309 SUPERFAMILY SSF144020 26 308 2.62E-95 T 18-10-2018 IPR024064 FdhE-like superfamily CH53_871 9714b96c07b1ab413e2cb31cabd67697 416 SUPERFAMILY SSF51735 169 332 1.73E-20 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_871 9714b96c07b1ab413e2cb31cabd67697 416 Gene3D G3DSA:3.90.180.10 14 348 1.9E-40 T 18-10-2018 CH53_871 9714b96c07b1ab413e2cb31cabd67697 416 Pfam PF00107 Zinc-binding dehydrogenase 187 327 2.6E-15 T 18-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CH53_871 9714b96c07b1ab413e2cb31cabd67697 416 SUPERFAMILY SSF50129 3 189 9.6E-26 T 18-10-2018 IPR011032 GroES-like superfamily CH53_871 9714b96c07b1ab413e2cb31cabd67697 416 Gene3D G3DSA:3.40.50.720 156 316 1.9E-40 T 18-10-2018 CH53_871 9714b96c07b1ab413e2cb31cabd67697 416 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 98 5.0E-6 T 18-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CH53_2276 bc8bfe3a7a56c5c429d4d1a4d2b3d208 117 Pfam PF02021 Uncharacterised protein family UPF0102 10 102 8.3E-22 T 18-10-2018 IPR003509 Uncharacterised protein family UPF0102 CH53_2276 bc8bfe3a7a56c5c429d4d1a4d2b3d208 117 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 4 116 5.7E-40 T 18-10-2018 IPR003509 Uncharacterised protein family UPF0102 CH53_2276 bc8bfe3a7a56c5c429d4d1a4d2b3d208 117 SUPERFAMILY SSF52980 4 112 1.61E-19 T 18-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CH53_2276 bc8bfe3a7a56c5c429d4d1a4d2b3d208 117 Hamap MF_00048 UPF0102 protein YraN [yraN]. 3 115 22.254 T 18-10-2018 IPR003509 Uncharacterised protein family UPF0102 CH53_2276 bc8bfe3a7a56c5c429d4d1a4d2b3d208 117 Gene3D G3DSA:3.40.1350.10 10 117 8.7E-29 T 18-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 CH53_2900 cd4dfeabb00c372f826a09dbef6cab24 658 SUPERFAMILY SSF52540 35 222 6.46E-55 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2900 cd4dfeabb00c372f826a09dbef6cab24 658 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 363 1.7E-33 T 18-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CH53_2900 cd4dfeabb00c372f826a09dbef6cab24 658 Gene3D G3DSA:3.30.300.150 512 640 2.7E-46 T 18-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_2900 cd4dfeabb00c372f826a09dbef6cab24 658 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 514 655 1.1E-59 T 18-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_2900 cd4dfeabb00c372f826a09dbef6cab24 658 SUPERFAMILY SSF48019 243 367 5.27E-36 T 18-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CH53_2900 cd4dfeabb00c372f826a09dbef6cab24 658 Gene3D G3DSA:3.40.50.300 13 177 6.2E-103 T 18-10-2018 CH53_2900 cd4dfeabb00c372f826a09dbef6cab24 658 Gene3D G3DSA:1.10.8.60 8 240 6.2E-103 T 18-10-2018 CH53_2900 cd4dfeabb00c372f826a09dbef6cab24 658 SMART SM00382 37 179 1.6E-6 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2900 cd4dfeabb00c372f826a09dbef6cab24 658 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 4.8E-134 T 18-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CH53_2900 cd4dfeabb00c372f826a09dbef6cab24 658 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 432 512 3.0E-22 T 18-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_2900 cd4dfeabb00c372f826a09dbef6cab24 658 Gene3D G3DSA:1.20.272.10 242 363 7.1E-45 T 18-10-2018 CH53_2900 cd4dfeabb00c372f826a09dbef6cab24 658 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.9E-5 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_2900 cd4dfeabb00c372f826a09dbef6cab24 658 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.9E-5 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 CH53_2900 cd4dfeabb00c372f826a09dbef6cab24 658 Pfam PF13177 DNA polymerase III, delta subunit 20 177 7.6E-42 T 18-10-2018 CH53_3842 a54a0f77a8c654cc8a8c8d6eeb15bc42 349 SUPERFAMILY SSF103481 66 148 3.92E-12 T 18-10-2018 CH53_3842 a54a0f77a8c654cc8a8c8d6eeb15bc42 349 SUPERFAMILY SSF103481 193 288 1.28E-6 T 18-10-2018 CH53_3842 a54a0f77a8c654cc8a8c8d6eeb15bc42 349 Pfam PF00892 EamA-like transporter family 155 284 3.0E-8 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_3842 a54a0f77a8c654cc8a8c8d6eeb15bc42 349 Pfam PF00892 EamA-like transporter family 10 144 4.5E-19 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_354 6e4aeaca62bff9d7ec11a2453ed1c4c1 323 Gene3D G3DSA:3.30.390.10 4 302 6.1E-127 T 18-10-2018 IPR029017 Enolase-like, N-terminal CH53_354 6e4aeaca62bff9d7ec11a2453ed1c4c1 323 SUPERFAMILY SSF54826 1 98 1.57E-28 T 18-10-2018 CH53_354 6e4aeaca62bff9d7ec11a2453ed1c4c1 323 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 321 23.223 T 18-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 CH53_354 6e4aeaca62bff9d7ec11a2453ed1c4c1 323 SMART SM00922 115 210 5.9E-9 T 18-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CH53_354 6e4aeaca62bff9d7ec11a2453ed1c4c1 323 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 307 3.5E-118 T 18-10-2018 CH53_354 6e4aeaca62bff9d7ec11a2453ed1c4c1 323 Pfam PF13378 Enolase C-terminal domain-like 127 273 2.5E-14 T 18-10-2018 IPR029065 Enolase C-terminal domain-like CH53_354 6e4aeaca62bff9d7ec11a2453ed1c4c1 323 SUPERFAMILY SSF51604 108 313 3.01E-50 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CH53_354 6e4aeaca62bff9d7ec11a2453ed1c4c1 323 Gene3D G3DSA:3.20.20.120 98 295 6.1E-127 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CH53_1341 bcbdb20c121232609af546b9a1698d67 610 Gene3D G3DSA:2.60.40.3500 10 121 1.2E-14 T 18-10-2018 CH53_1341 bcbdb20c121232609af546b9a1698d67 610 SUPERFAMILY SSF54106 498 542 1.57E-10 T 18-10-2018 CH53_1341 bcbdb20c121232609af546b9a1698d67 610 Gene3D G3DSA:3.40.630.40 205 447 5.5E-69 T 18-10-2018 CH53_1341 bcbdb20c121232609af546b9a1698d67 610 Pfam PF11741 AMIN domain 21 115 3.1E-8 T 18-10-2018 IPR021731 AMIN domain CH53_1341 bcbdb20c121232609af546b9a1698d67 610 SUPERFAMILY SSF53187 216 440 1.13E-51 T 18-10-2018 CH53_1341 bcbdb20c121232609af546b9a1698d67 610 Gene3D G3DSA:3.10.350.10 494 548 5.5E-15 T 18-10-2018 IPR036779 LysM domain superfamily CH53_1341 bcbdb20c121232609af546b9a1698d67 610 SMART SM00257 499 542 8.2E-14 T 18-10-2018 IPR018392 LysM domain CH53_1341 bcbdb20c121232609af546b9a1698d67 610 SMART SM00257 565 608 1.3E-16 T 18-10-2018 IPR018392 LysM domain CH53_1341 bcbdb20c121232609af546b9a1698d67 610 Gene3D G3DSA:3.10.350.10 549 610 3.0E-17 T 18-10-2018 IPR036779 LysM domain superfamily CH53_1341 bcbdb20c121232609af546b9a1698d67 610 Pfam PF01476 LysM domain 500 542 1.5E-11 T 18-10-2018 IPR018392 LysM domain CH53_1341 bcbdb20c121232609af546b9a1698d67 610 Pfam PF01476 LysM domain 566 608 2.6E-14 T 18-10-2018 IPR018392 LysM domain CH53_1341 bcbdb20c121232609af546b9a1698d67 610 SUPERFAMILY SSF54106 564 608 5.1E-11 T 18-10-2018 CH53_1341 bcbdb20c121232609af546b9a1698d67 610 SMART SM00646 278 437 4.4E-72 T 18-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CH53_1341 bcbdb20c121232609af546b9a1698d67 610 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 218 437 4.3E-48 T 18-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CH53_969 e5eb87910c41f4fd37555f6c09e32402 192 Pfam PF13563 2'-5' RNA ligase superfamily 22 142 8.0E-11 T 18-10-2018 CH53_969 e5eb87910c41f4fd37555f6c09e32402 192 SUPERFAMILY SSF55144 14 184 5.49E-42 T 18-10-2018 IPR009097 Cyclic phosphodiesterase CH53_969 e5eb87910c41f4fd37555f6c09e32402 192 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 13 182 21.122 T 18-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CH53_969 e5eb87910c41f4fd37555f6c09e32402 192 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 14 182 2.1E-34 T 18-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CH53_969 e5eb87910c41f4fd37555f6c09e32402 192 Gene3D G3DSA:3.90.1140.10 10 183 2.0E-47 T 18-10-2018 CH53_247 ffb88f929556862d897f9026b9669e62 632 Gene3D G3DSA:3.20.20.70 205 430 5.9E-10 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_247 ffb88f929556862d897f9026b9669e62 632 SUPERFAMILY SSF51445 218 525 3.09E-33 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_84 b97d6d4371d23c54a4fd434082b870d5 428 Pfam PF00072 Response regulator receiver domain 13 124 5.1E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_84 b97d6d4371d23c54a4fd434082b870d5 428 SUPERFAMILY SSF52172 12 151 2.42E-34 T 18-10-2018 IPR011006 CheY-like superfamily CH53_84 b97d6d4371d23c54a4fd434082b870d5 428 SMART SM00448 11 124 7.1E-34 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_84 b97d6d4371d23c54a4fd434082b870d5 428 Gene3D G3DSA:3.60.40.10 139 419 1.0E-58 T 18-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CH53_84 b97d6d4371d23c54a4fd434082b870d5 428 SMART SM00331 173 418 2.9E-16 T 18-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CH53_84 b97d6d4371d23c54a4fd434082b870d5 428 Gene3D G3DSA:3.40.50.2300 10 132 1.0E-31 T 18-10-2018 CH53_84 b97d6d4371d23c54a4fd434082b870d5 428 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 200 418 1.2E-36 T 18-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CH53_265 76b8398df55504ba89a778866da568d2 406 SUPERFAMILY SSF103473 9 401 5.75E-71 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_265 76b8398df55504ba89a778866da568d2 406 Gene3D G3DSA:1.20.1720.10 18 397 9.8E-103 T 18-10-2018 CH53_265 76b8398df55504ba89a778866da568d2 406 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 17 397 1.6E-137 T 18-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 CH53_265 76b8398df55504ba89a778866da568d2 406 Pfam PF07690 Major Facilitator Superfamily 23 365 4.7E-46 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_1072 49009711eb9dc633b6051d6109837fd2 312 SUPERFAMILY SSF52374 15 175 1.35E-36 T 18-10-2018 CH53_1072 49009711eb9dc633b6051d6109837fd2 312 Pfam PF01687 Riboflavin kinase 184 306 2.2E-37 T 18-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 CH53_1072 49009711eb9dc633b6051d6109837fd2 312 Gene3D G3DSA:2.40.30.30 186 310 7.0E-38 T 18-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 CH53_1072 49009711eb9dc633b6051d6109837fd2 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 4.7E-113 T 18-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CH53_1072 49009711eb9dc633b6051d6109837fd2 312 PIRSF PIRSF004491 1 310 3.0E-102 T 18-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CH53_1072 49009711eb9dc633b6051d6109837fd2 312 SUPERFAMILY SSF82114 174 307 8.28E-44 T 18-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 CH53_1072 49009711eb9dc633b6051d6109837fd2 312 Gene3D G3DSA:3.40.50.620 1 185 8.7E-60 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_1072 49009711eb9dc633b6051d6109837fd2 312 SMART SM00904 183 307 4.7E-62 T 18-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 CH53_1072 49009711eb9dc633b6051d6109837fd2 312 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 49 4.2E-7 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CH53_1072 49009711eb9dc633b6051d6109837fd2 312 Pfam PF06574 FAD synthetase 12 167 6.8E-57 T 18-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CH53_3244 9096dee43fdd455ce69acc8e1e062740 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 38 68 8.1E-11 T 18-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CH53_3244 9096dee43fdd455ce69acc8e1e062740 88 Gene3D G3DSA:1.20.120.910 1 73 7.9E-21 T 18-10-2018 CH53_3244 9096dee43fdd455ce69acc8e1e062740 88 SUPERFAMILY SSF57716 38 72 1.07E-5 T 18-10-2018 CH53_2185 72f9ba88ce9852eaa28b4df20400dc26 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 18-10-2018 IPR019844 Cold-shock conserved site CH53_2185 72f9ba88ce9852eaa28b4df20400dc26 70 PIRSF PIRSF002599 1 70 4.8E-24 T 18-10-2018 IPR012156 Cold shock, CspA GO:0003676 CH53_2185 72f9ba88ce9852eaa28b4df20400dc26 70 PRINTS PR00050 Cold shock protein signature 7 22 1.0E-17 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_2185 72f9ba88ce9852eaa28b4df20400dc26 70 PRINTS PR00050 Cold shock protein signature 43 61 1.0E-17 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_2185 72f9ba88ce9852eaa28b4df20400dc26 70 PRINTS PR00050 Cold shock protein signature 28 37 1.0E-17 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_2185 72f9ba88ce9852eaa28b4df20400dc26 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.1E-32 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_2185 72f9ba88ce9852eaa28b4df20400dc26 70 SUPERFAMILY SSF50249 3 69 2.57E-25 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_2185 72f9ba88ce9852eaa28b4df20400dc26 70 Gene3D G3DSA:2.40.50.140 2 69 1.9E-29 T 18-10-2018 CH53_2185 72f9ba88ce9852eaa28b4df20400dc26 70 SMART SM00357 6 70 1.5E-32 T 18-10-2018 IPR011129 Cold shock domain GO:0003676 CH53_3057 afcfec428578766548ed15d323b1a337 73 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 73 26.6 T 18-10-2018 IPR024905 Sec-independent protein translocase protein TatE CH53_3057 afcfec428578766548ed15d323b1a337 73 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 67 18.915 T 18-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CH53_3057 afcfec428578766548ed15d323b1a337 73 Pfam PF02416 mttA/Hcf106 family 4 47 5.1E-11 T 18-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CH53_3057 afcfec428578766548ed15d323b1a337 73 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 7.0E-18 T 18-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CH53_94 7f99249bdd1f3821862abdbd7327b63c 871 Gene3D G3DSA:2.60.40.2070 787 871 1.9E-18 T 18-10-2018 CH53_94 7f99249bdd1f3821862abdbd7327b63c 871 Gene3D G3DSA:2.60.40.2610 694 785 2.7E-29 T 18-10-2018 CH53_94 7f99249bdd1f3821862abdbd7327b63c 871 SUPERFAMILY SSF141729 54 175 1.03E-26 T 18-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 CH53_94 7f99249bdd1f3821862abdbd7327b63c 871 Pfam PF00577 Outer membrane usher protein 212 780 1.2E-139 T 18-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 CH53_94 7f99249bdd1f3821862abdbd7327b63c 871 Pfam PF13954 PapC N-terminal domain 55 198 1.2E-32 T 18-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 CH53_94 7f99249bdd1f3821862abdbd7327b63c 871 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 328 338 - T 18-10-2018 IPR018030 Fimbrial membrane usher, conserved site CH53_94 7f99249bdd1f3821862abdbd7327b63c 871 Gene3D G3DSA:3.10.20.410 53 175 1.5E-25 T 18-10-2018 CH53_94 7f99249bdd1f3821862abdbd7327b63c 871 Pfam PF13953 PapC C-terminal domain 789 853 5.6E-18 T 18-10-2018 IPR025949 PapC-like, C-terminal domain CH53_94 7f99249bdd1f3821862abdbd7327b63c 871 Gene3D G3DSA:2.60.40.3110 286 375 6.8E-35 T 18-10-2018 CH53_3024 7e527091d2946fda362f10a07978a066 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 64 2.7E-12 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_3024 7e527091d2946fda362f10a07978a066 204 SUPERFAMILY SSF46689 11 93 6.16E-16 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3024 7e527091d2946fda362f10a07978a066 204 Gene3D G3DSA:1.10.357.10 14 202 3.4E-26 T 18-10-2018 CH53_3024 7e527091d2946fda362f10a07978a066 204 SUPERFAMILY SSF48498 89 187 1.02E-6 T 18-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH53_3024 7e527091d2946fda362f10a07978a066 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 3.3E-5 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_3024 7e527091d2946fda362f10a07978a066 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 3.3E-5 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_850 afe29338ee569d6e27a8196d24236efd 334 SUPERFAMILY SSF53822 33 304 9.42E-64 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_850 afe29338ee569d6e27a8196d24236efd 334 Gene3D G3DSA:3.40.50.2300 135 272 7.0E-85 T 18-10-2018 CH53_850 afe29338ee569d6e27a8196d24236efd 334 Gene3D G3DSA:3.40.50.2300 38 304 7.0E-85 T 18-10-2018 CH53_850 afe29338ee569d6e27a8196d24236efd 334 Pfam PF13407 Periplasmic binding protein domain 37 292 1.2E-53 T 18-10-2018 IPR025997 Periplasmic binding protein CH53_3179 f7a5a487cb6066a144795c5123430238 231 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 220 1.2E-75 T 18-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CH53_3179 f7a5a487cb6066a144795c5123430238 231 SUPERFAMILY SSF161098 5 220 2.49E-52 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3179 f7a5a487cb6066a144795c5123430238 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 227 1.9E-24 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_3179 f7a5a487cb6066a144795c5123430238 231 Gene3D G3DSA:1.10.3720.10 2 226 3.4E-65 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3606 afbc01ad51fcf929096dacf44a9272c4 269 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 217 259 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CH53_3606 afbc01ad51fcf929096dacf44a9272c4 269 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 232 247 3.1E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_3606 afbc01ad51fcf929096dacf44a9272c4 269 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 263 3.1E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_3606 afbc01ad51fcf929096dacf44a9272c4 269 SUPERFAMILY SSF46689 216 265 2.78E-11 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3606 afbc01ad51fcf929096dacf44a9272c4 269 Pfam PF12833 Helix-turn-helix domain 187 264 9.1E-15 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_3606 afbc01ad51fcf929096dacf44a9272c4 269 Gene3D G3DSA:1.10.10.60 161 267 1.5E-24 T 18-10-2018 CH53_3606 afbc01ad51fcf929096dacf44a9272c4 269 SMART SM00342 181 263 2.8E-20 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_3957 ec7bd5d96e7203ccb639c6ea4b2000ce 343 Gene3D G3DSA:3.40.50.2300 66 335 6.4E-58 T 18-10-2018 CH53_3957 ec7bd5d96e7203ccb639c6ea4b2000ce 343 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 321 5.9E-56 T 18-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH53_3957 ec7bd5d96e7203ccb639c6ea4b2000ce 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 18-10-2018 CH53_3957 ec7bd5d96e7203ccb639c6ea4b2000ce 343 SMART SM00354 5 75 2.1E-29 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_3957 ec7bd5d96e7203ccb639c6ea4b2000ce 343 Gene3D G3DSA:1.10.260.40 3 63 8.7E-21 T 18-10-2018 CH53_3957 ec7bd5d96e7203ccb639c6ea4b2000ce 343 SUPERFAMILY SSF47413 4 63 1.04E-16 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_3957 ec7bd5d96e7203ccb639c6ea4b2000ce 343 Gene3D G3DSA:3.40.50.2300 165 340 6.4E-58 T 18-10-2018 CH53_3957 ec7bd5d96e7203ccb639c6ea4b2000ce 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 7.4E-17 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_3957 ec7bd5d96e7203ccb639c6ea4b2000ce 343 SUPERFAMILY SSF53822 65 342 1.12E-56 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_3213 d56920d99722fc0052fd60d12476cab1 278 SUPERFAMILY SSF52540 24 261 5.09E-57 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3213 d56920d99722fc0052fd60d12476cab1 278 SMART SM00382 50 271 3.3E-6 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3213 d56920d99722fc0052fd60d12476cab1 278 Gene3D G3DSA:3.40.50.300 21 273 2.8E-61 T 18-10-2018 CH53_3213 d56920d99722fc0052fd60d12476cab1 278 Pfam PF00005 ABC transporter 41 202 3.0E-33 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3213 d56920d99722fc0052fd60d12476cab1 278 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3213 d56920d99722fc0052fd60d12476cab1 278 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 25 269 9.2E-91 T 18-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 CH53_2012 6ded80f9e91dbac24b666bc59f858512 342 Gene3D G3DSA:3.40.50.1820 24 333 1.3E-44 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2012 6ded80f9e91dbac24b666bc59f858512 342 Pfam PF12146 Serine aminopeptidase, S33 51 311 1.4E-55 T 18-10-2018 IPR022742 Serine aminopeptidase, S33 CH53_2012 6ded80f9e91dbac24b666bc59f858512 342 SUPERFAMILY SSF53474 30 328 1.16E-36 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_398 65818e92e30ff440e4c5dbeab7a0e999 185 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 167 4.8E-40 T 18-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 CH53_398 65818e92e30ff440e4c5dbeab7a0e999 185 SUPERFAMILY SSF56300 1 163 8.59E-37 T 18-10-2018 CH53_398 65818e92e30ff440e4c5dbeab7a0e999 185 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 161 4.1E-23 T 18-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 CH53_398 65818e92e30ff440e4c5dbeab7a0e999 185 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 120 144 - T 18-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site CH53_398 65818e92e30ff440e4c5dbeab7a0e999 185 Gene3D G3DSA:3.60.21.10 1 183 9.4E-69 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like CH53_1102 dada4f9ce74d8a6ab989c7fb0b248d74 273 Gene3D G3DSA:2.60.120.10 3 85 2.6E-7 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_1102 dada4f9ce74d8a6ab989c7fb0b248d74 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 5.1E-6 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_1102 dada4f9ce74d8a6ab989c7fb0b248d74 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 5.1E-6 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_1102 dada4f9ce74d8a6ab989c7fb0b248d74 273 SUPERFAMILY SSF46689 171 221 1.43E-7 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1102 dada4f9ce74d8a6ab989c7fb0b248d74 273 Pfam PF12833 Helix-turn-helix domain 193 271 8.1E-25 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_1102 dada4f9ce74d8a6ab989c7fb0b248d74 273 SUPERFAMILY SSF51215 16 158 5.49E-14 T 18-10-2018 IPR037923 Transcription regulator HTH-like CH53_1102 dada4f9ce74d8a6ab989c7fb0b248d74 273 SMART SM00342 187 270 3.2E-29 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_1102 dada4f9ce74d8a6ab989c7fb0b248d74 273 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 266 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CH53_1102 dada4f9ce74d8a6ab989c7fb0b248d74 273 Gene3D G3DSA:1.10.10.60 166 273 1.2E-28 T 18-10-2018 CH53_1102 dada4f9ce74d8a6ab989c7fb0b248d74 273 Pfam PF02311 AraC-like ligand binding domain 15 154 1.0E-23 T 18-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CH53_1102 dada4f9ce74d8a6ab989c7fb0b248d74 273 SUPERFAMILY SSF46689 223 272 1.16E-12 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1102 dada4f9ce74d8a6ab989c7fb0b248d74 273 Hamap MF_01534 HTH-type transcriptional activator RhaS [rhaS]. 1 273 54.679 T 18-10-2018 IPR023609 Transcription regulator HTH, RhaS GO:0003700|GO:0006355|GO:0019299 CH53_2005 008ba5cd629143cde82652f1a0f08a39 319 Gene3D G3DSA:1.20.58.340 243 319 2.1E-25 T 18-10-2018 CH53_2005 008ba5cd629143cde82652f1a0f08a39 319 Pfam PF01544 CorA-like Mg2+ transporter protein 29 315 6.7E-53 T 18-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CH53_2005 008ba5cd629143cde82652f1a0f08a39 319 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 319 2.3E-107 T 18-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 CH53_2005 008ba5cd629143cde82652f1a0f08a39 319 SUPERFAMILY SSF144083 254 317 3.14E-20 T 18-10-2018 CH53_2005 008ba5cd629143cde82652f1a0f08a39 319 SUPERFAMILY SSF143865 1 258 2.75E-36 T 18-10-2018 CH53_466 de0c1f952b2e34618c7cbfca9f6f223c 345 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 18-10-2018 CH53_466 de0c1f952b2e34618c7cbfca9f6f223c 345 Gene3D G3DSA:3.40.50.2300 162 292 4.4E-69 T 18-10-2018 CH53_466 de0c1f952b2e34618c7cbfca9f6f223c 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.6E-19 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_466 de0c1f952b2e34618c7cbfca9f6f223c 345 SMART SM00354 1 71 2.1E-31 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_466 de0c1f952b2e34618c7cbfca9f6f223c 345 Gene3D G3DSA:1.10.260.40 1 58 2.2E-22 T 18-10-2018 CH53_466 de0c1f952b2e34618c7cbfca9f6f223c 345 SUPERFAMILY SSF47413 2 59 2.36E-18 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_466 de0c1f952b2e34618c7cbfca9f6f223c 345 Gene3D G3DSA:3.40.50.2300 75 305 4.4E-69 T 18-10-2018 CH53_466 de0c1f952b2e34618c7cbfca9f6f223c 345 Pfam PF13377 Periplasmic binding protein-like domain 172 331 1.3E-30 T 18-10-2018 CH53_466 de0c1f952b2e34618c7cbfca9f6f223c 345 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.0E-5 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_466 de0c1f952b2e34618c7cbfca9f6f223c 345 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.0E-5 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_466 de0c1f952b2e34618c7cbfca9f6f223c 345 SUPERFAMILY SSF53822 61 335 5.5E-69 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_198 736567251bfcb124bf39ce84de05e15a 263 Pfam PF00753 Metallo-beta-lactamase superfamily 34 236 1.3E-25 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_198 736567251bfcb124bf39ce84de05e15a 263 SUPERFAMILY SSF56281 14 252 1.25E-30 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_198 736567251bfcb124bf39ce84de05e15a 263 Gene3D G3DSA:3.60.15.10 1 263 6.5E-73 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_198 736567251bfcb124bf39ce84de05e15a 263 SMART SM00849 34 247 1.4E-19 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_2179 e75578223e7876d4ade3c40e799123c3 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 312 2.0E-42 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_3321 c02a4d06e773132c8d0d3a15724163cc 378 Gene3D G3DSA:3.40.50.2000 1 184 3.6E-5 T 18-10-2018 CH53_3321 c02a4d06e773132c8d0d3a15724163cc 378 Gene3D G3DSA:3.40.50.2000 190 378 4.1E-37 T 18-10-2018 CH53_3321 c02a4d06e773132c8d0d3a15724163cc 378 SUPERFAMILY SSF53756 3 378 1.75E-63 T 18-10-2018 CH53_3321 c02a4d06e773132c8d0d3a15724163cc 378 Pfam PF00534 Glycosyl transferases group 1 203 354 2.7E-27 T 18-10-2018 IPR001296 Glycosyl transferase, family 1 CH53_4260 9325f6a80772402c52623ae571a25c2c 278 Gene3D G3DSA:2.60.120.10 10 264 3.5E-121 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_4260 9325f6a80772402c52623ae571a25c2c 278 Gene3D G3DSA:2.60.120.520 30 144 3.5E-121 T 18-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CH53_4260 9325f6a80772402c52623ae571a25c2c 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 56.026 T 18-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CH53_4260 9325f6a80772402c52623ae571a25c2c 278 SUPERFAMILY SSF51182 1 262 1.78E-105 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_4260 9325f6a80772402c52623ae571a25c2c 278 PIRSF PIRSF006625 1 278 1.7E-136 T 18-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CH53_4260 9325f6a80772402c52623ae571a25c2c 278 Pfam PF04962 KduI/IolB family 69 272 5.9E-33 T 18-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CH53_3902 9f54bafd5c8cdf7524ec47ce3402d9ae 809 Pfam PF03797 Autotransporter beta-domain 555 782 1.6E-12 T 18-10-2018 IPR005546 Autotransporter beta-domain CH53_3902 9f54bafd5c8cdf7524ec47ce3402d9ae 809 Gene3D G3DSA:2.40.128.130 546 809 5.7E-25 T 18-10-2018 IPR036709 Autotransporter beta-domain superfamily CH53_3902 9f54bafd5c8cdf7524ec47ce3402d9ae 809 SUPERFAMILY SSF103515 537 809 6.8E-13 T 18-10-2018 IPR036709 Autotransporter beta-domain superfamily CH53_3902 9f54bafd5c8cdf7524ec47ce3402d9ae 809 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 401 809 1.1E-9 T 18-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CH53_1000 5d359ee31557cf90e0577472b3c1d5fc 302 SUPERFAMILY SSF54675 14 129 3.22E-32 T 18-10-2018 CH53_1000 5d359ee31557cf90e0577472b3c1d5fc 302 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 300 9.3E-59 T 18-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 CH53_1000 5d359ee31557cf90e0577472b3c1d5fc 302 Gene3D G3DSA:3.90.1170.20 22 300 4.9E-116 T 18-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 CH53_1000 5d359ee31557cf90e0577472b3c1d5fc 302 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 128 3.4E-27 T 18-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CH53_1000 5d359ee31557cf90e0577472b3c1d5fc 302 SUPERFAMILY SSF51690 130 301 2.79E-56 T 18-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CH53_1000 5d359ee31557cf90e0577472b3c1d5fc 302 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 301 3.3E-97 T 18-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 CH53_1000 5d359ee31557cf90e0577472b3c1d5fc 302 PIRSF PIRSF006250 17 302 7.0E-104 T 18-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CH53_1000 5d359ee31557cf90e0577472b3c1d5fc 302 Gene3D G3DSA:3.20.20.70 139 291 4.9E-116 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3602 8ffd14ba151b65aa9531ed18811d2176 434 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 73 420 2.1E-100 T 18-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CH53_3602 8ffd14ba151b65aa9531ed18811d2176 434 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 16 433 4.5E-170 T 18-10-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 CH53_3602 8ffd14ba151b65aa9531ed18811d2176 434 SUPERFAMILY SSF54909 66 427 7.51E-95 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_3602 8ffd14ba151b65aa9531ed18811d2176 434 Pfam PF04261 Dyp-type peroxidase family 73 421 4.0E-111 T 18-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CH53_1035 0b72c259a1a3c0efe71f3389bed479fa 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 1.1E-36 T 18-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CH53_1035 0b72c259a1a3c0efe71f3389bed479fa 520 SUPERFAMILY SSF110921 391 499 1.07E-25 T 18-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CH53_1035 0b72c259a1a3c0efe71f3389bed479fa 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 2.0E-251 T 18-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CH53_1035 0b72c259a1a3c0efe71f3389bed479fa 520 Gene3D G3DSA:1.10.238.260 280 392 3.4E-33 T 18-10-2018 CH53_1035 0b72c259a1a3c0efe71f3389bed479fa 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 43.323 T 18-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CH53_1035 0b72c259a1a3c0efe71f3389bed479fa 520 Pfam PF00682 HMGL-like 4 273 5.5E-106 T 18-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CH53_1035 0b72c259a1a3c0efe71f3389bed479fa 520 Gene3D G3DSA:3.30.160.270 393 501 4.9E-12 T 18-10-2018 CH53_1035 0b72c259a1a3c0efe71f3389bed479fa 520 Gene3D G3DSA:3.20.20.70 1 277 3.5E-108 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_1035 0b72c259a1a3c0efe71f3389bed479fa 520 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 18-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CH53_1035 0b72c259a1a3c0efe71f3389bed479fa 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 18-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CH53_1035 0b72c259a1a3c0efe71f3389bed479fa 520 SUPERFAMILY SSF51569 1 291 1.36E-100 T 18-10-2018 CH53_1035 0b72c259a1a3c0efe71f3389bed479fa 520 SMART SM00917 369 500 1.1E-37 T 18-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CH53_1898 b9db8be2dce17c4145d7850a39077b43 161 Pfam PF03737 Aldolase/RraA 5 152 2.7E-35 T 18-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CH53_1898 b9db8be2dce17c4145d7850a39077b43 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.199 T 18-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 CH53_1898 b9db8be2dce17c4145d7850a39077b43 161 SUPERFAMILY SSF89562 2 158 4.97E-44 T 18-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CH53_1898 b9db8be2dce17c4145d7850a39077b43 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.9E-62 T 18-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 CH53_1898 b9db8be2dce17c4145d7850a39077b43 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 2.9E-87 T 18-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 CH53_1898 b9db8be2dce17c4145d7850a39077b43 161 Gene3D G3DSA:3.50.30.40 1 161 6.2E-61 T 18-10-2018 CH53_2628 ca22ed8b8811323ef8deeb4c53b9da0d 88 Gene3D G3DSA:1.10.150.250 1 88 4.7E-40 T 18-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily CH53_2628 ca22ed8b8811323ef8deeb4c53b9da0d 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 1.4E-26 T 18-10-2018 IPR005631 Flavinator of succinate dehydrogenase CH53_2628 ca22ed8b8811323ef8deeb4c53b9da0d 88 SUPERFAMILY SSF109910 2 78 6.15E-28 T 18-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily CH53_2495 3c84ffc88d04906c225f1dc779da1481 317 SUPERFAMILY SSF53613 4 297 5.46E-67 T 18-10-2018 IPR029056 Ribokinase-like CH53_2495 3c84ffc88d04906c225f1dc779da1481 317 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 307 1.1E-89 T 18-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CH53_2495 3c84ffc88d04906c225f1dc779da1481 317 Pfam PF00294 pfkB family carbohydrate kinase 18 295 8.1E-59 T 18-10-2018 IPR011611 Carbohydrate kinase PfkB CH53_2495 3c84ffc88d04906c225f1dc779da1481 317 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 18-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CH53_2495 3c84ffc88d04906c225f1dc779da1481 317 Gene3D G3DSA:3.40.1190.20 1 309 1.6E-109 T 18-10-2018 IPR029056 Ribokinase-like CH53_2495 3c84ffc88d04906c225f1dc779da1481 317 PIRSF PIRSF000535 1 311 5.2E-96 T 18-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CH53_2495 3c84ffc88d04906c225f1dc779da1481 317 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 18-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CH53_225 3649f970c4d4ab816b0cd9df4790ceb6 206 SUPERFAMILY SSF52833 1 83 1.77E-23 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_225 3649f970c4d4ab816b0cd9df4790ceb6 206 Gene3D G3DSA:3.40.30.10 1 83 3.1E-33 T 18-10-2018 CH53_225 3649f970c4d4ab816b0cd9df4790ceb6 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 79 6.5E-14 T 18-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CH53_225 3649f970c4d4ab816b0cd9df4790ceb6 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 119 194 9.7E-6 T 18-10-2018 IPR004046 Glutathione S-transferase, C-terminal CH53_225 3649f970c4d4ab816b0cd9df4790ceb6 206 SUPERFAMILY SSF47616 72 202 5.15E-25 T 18-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CH53_225 3649f970c4d4ab816b0cd9df4790ceb6 206 Gene3D G3DSA:1.20.1050.10 85 201 3.0E-41 T 18-10-2018 CH53_754 974f03404baa98a0e6f431a773f43077 323 Gene3D G3DSA:1.10.620.20 6 292 1.5E-115 T 18-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CH53_754 974f03404baa98a0e6f431a773f43077 323 SUPERFAMILY SSF47240 9 323 3.45E-106 T 18-10-2018 IPR009078 Ferritin-like superfamily CH53_754 974f03404baa98a0e6f431a773f43077 323 PIRSF PIRSF000355 6 320 4.3E-84 T 18-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_754 974f03404baa98a0e6f431a773f43077 323 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 11 323 1.9E-145 T 18-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CH53_754 974f03404baa98a0e6f431a773f43077 323 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 101 117 - T 18-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_754 974f03404baa98a0e6f431a773f43077 323 Pfam PF00268 Ribonucleotide reductase, small chain 13 278 7.8E-87 T 18-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 Gene3D G3DSA:2.40.50.100 1151 1215 8.6E-60 T 18-10-2018 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 Gene3D G3DSA:1.10.132.30 641 790 4.3E-66 T 18-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.9E-27 T 18-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 18-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 18-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 Gene3D G3DSA:1.10.274.100 490 640 3.6E-37 T 18-10-2018 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 SUPERFAMILY SSF64484 16 1363 0.0 T 18-10-2018 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 7.9E-89 T 18-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 SMART SM00663 235 514 1.1E-184 T 18-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 Gene3D G3DSA:1.10.40.90 374 416 2.0E-21 T 18-10-2018 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.4E-18 T 18-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 Gene3D G3DSA:1.10.150.390 1316 1375 2.9E-28 T 18-10-2018 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 Gene3D G3DSA:1.10.1790.20 1135 1314 8.6E-60 T 18-10-2018 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 Gene3D G3DSA:2.40.50.100 1023 1126 4.5E-28 T 18-10-2018 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 8.1E-27 T 18-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1374 19.007 T 18-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 5.7E-79 T 18-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_2096 a28c483f6dea1c182af8d8c3bc3765fc 1406 Gene3D G3DSA:2.40.50.100 948 1022 1.6E-26 T 18-10-2018 CH53_1434 c17823474030298582777347e8269be8 493 Gene3D G3DSA:3.30.1370.120 171 265 1.7E-11 T 18-10-2018 IPR038591 NolW-like superfamily CH53_1434 c17823474030298582777347e8269be8 493 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 28 490 1.5E-175 T 18-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CH53_1434 c17823474030298582777347e8269be8 493 Gene3D G3DSA:3.30.1370.120 101 168 1.4E-29 T 18-10-2018 IPR038591 NolW-like superfamily CH53_1434 c17823474030298582777347e8269be8 493 Gene3D G3DSA:3.55.50.30 16 99 4.0E-23 T 18-10-2018 CH53_1434 c17823474030298582777347e8269be8 493 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 269 289 6.2E-39 T 18-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CH53_1434 c17823474030298582777347e8269be8 493 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 377 392 6.2E-39 T 18-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CH53_1434 c17823474030298582777347e8269be8 493 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 343 362 6.2E-39 T 18-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CH53_1434 c17823474030298582777347e8269be8 493 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 468 487 6.2E-39 T 18-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CH53_1434 c17823474030298582777347e8269be8 493 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 187 204 6.2E-39 T 18-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CH53_1434 c17823474030298582777347e8269be8 493 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 435 468 - T 18-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 CH53_1434 c17823474030298582777347e8269be8 493 Pfam PF03958 Bacterial type II/III secretion system short domain 175 266 6.7E-16 T 18-10-2018 IPR005644 NolW-like CH53_1434 c17823474030298582777347e8269be8 493 Pfam PF00263 Bacterial type II and III secretion system protein 330 486 1.6E-35 T 18-10-2018 IPR004846 Type II/III secretion system GO:0009306 CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 SUPERFAMILY SSF56712 1 608 1.02E-187 T 18-10-2018 IPR023405 DNA topoisomerase, type IA, core domain CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 633 2.6E-278 T 18-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 18-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 Gene3D G3DSA:1.10.290.10 289 416 3.3E-174 T 18-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 3.5E-24 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 3.5E-24 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 3.5E-24 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 3.5E-24 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 3.5E-24 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 Gene3D G3DSA:3.40.50.140 1 156 3.3E-62 T 18-10-2018 CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 Pfam PF01751 Toprim domain 3 134 3.6E-18 T 18-10-2018 IPR006171 TOPRIM domain CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 Gene3D G3DSA:1.10.460.10 162 602 3.3E-174 T 18-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 SMART SM00437 280 558 8.5E-102 T 18-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 SMART SM00493 1 124 1.1E-31 T 18-10-2018 IPR006171 TOPRIM domain CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 Pfam PF01131 DNA topoisomerase 158 593 2.2E-109 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 Gene3D G3DSA:2.70.20.10 217 488 3.3E-174 T 18-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 SMART SM00436 128 223 3.9E-36 T 18-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CH53_3855 1d78dfbbf63f93aa536e20aef8d81d9a 641 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 641 65.662 T 18-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CH53_1385 0bb640926c40d1bd1d1b1e0479ac4eba 286 Pfam PF01380 SIS domain 132 260 9.9E-19 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_1385 0bb640926c40d1bd1d1b1e0479ac4eba 286 SUPERFAMILY SSF53697 110 273 2.43E-35 T 18-10-2018 CH53_1385 0bb640926c40d1bd1d1b1e0479ac4eba 286 SUPERFAMILY SSF46689 1 77 7.88E-18 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1385 0bb640926c40d1bd1d1b1e0479ac4eba 286 Gene3D G3DSA:3.40.50.10490 100 280 4.5E-38 T 18-10-2018 CH53_1385 0bb640926c40d1bd1d1b1e0479ac4eba 286 Gene3D G3DSA:1.10.10.10 1 80 3.7E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1385 0bb640926c40d1bd1d1b1e0479ac4eba 286 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 3.7E-22 T 18-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CH53_3360 78f00d3e03ecb5287ba662e9c3c72275 215 Pfam PF06130 Phosphate propanoyltransferase 23 101 7.4E-27 T 18-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 CH53_3360 78f00d3e03ecb5287ba662e9c3c72275 215 Pfam PF06130 Phosphate propanoyltransferase 131 196 2.4E-17 T 18-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 CH53_3360 78f00d3e03ecb5287ba662e9c3c72275 215 PIRSF PIRSF010130 1 210 2.4E-85 T 18-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 CH53_2739 9b5d810b92b2e0d1088e4bcdf6b5d0d4 455 Gene3D G3DSA:3.40.50.620 17 237 1.0E-69 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_2739 9b5d810b92b2e0d1088e4bcdf6b5d0d4 455 Pfam PF11734 TilS substrate C-terminal domain 379 451 9.6E-27 T 18-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CH53_2739 9b5d810b92b2e0d1088e4bcdf6b5d0d4 455 SMART SM00977 379 451 2.8E-27 T 18-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CH53_2739 9b5d810b92b2e0d1088e4bcdf6b5d0d4 455 SUPERFAMILY SSF52402 16 237 3.53E-62 T 18-10-2018 CH53_2739 9b5d810b92b2e0d1088e4bcdf6b5d0d4 455 Gene3D G3DSA:1.20.59.20 238 322 1.1E-28 T 18-10-2018 CH53_2739 9b5d810b92b2e0d1088e4bcdf6b5d0d4 455 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 379 423 1.7E-13 T 18-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CH53_2739 9b5d810b92b2e0d1088e4bcdf6b5d0d4 455 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 24 207 3.8E-52 T 18-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CH53_2739 9b5d810b92b2e0d1088e4bcdf6b5d0d4 455 Pfam PF01171 PP-loop family 24 202 2.4E-57 T 18-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CH53_2739 9b5d810b92b2e0d1088e4bcdf6b5d0d4 455 SUPERFAMILY SSF82829 238 322 3.14E-23 T 18-10-2018 CH53_2739 9b5d810b92b2e0d1088e4bcdf6b5d0d4 455 SUPERFAMILY SSF56037 349 452 1.1E-30 T 18-10-2018 CH53_2739 9b5d810b92b2e0d1088e4bcdf6b5d0d4 455 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 12 311 23.311 T 18-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CH53_2739 9b5d810b92b2e0d1088e4bcdf6b5d0d4 455 Pfam PF09179 TilS substrate binding domain 252 319 1.5E-17 T 18-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CH53_2201 168c5baed1469f5d32f45e52f6b1a00b 330 PIRSF PIRSF038471 2 283 7.2E-75 T 18-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CH53_2201 168c5baed1469f5d32f45e52f6b1a00b 330 Gene3D G3DSA:2.40.10.340 122 266 9.7E-35 T 18-10-2018 CH53_2201 168c5baed1469f5d32f45e52f6b1a00b 330 Gene3D G3DSA:2.40.10.350 180 257 9.7E-35 T 18-10-2018 CH53_2201 168c5baed1469f5d32f45e52f6b1a00b 330 Pfam PF04085 rod shape-determining protein MreC 123 269 2.2E-37 T 18-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CH53_2201 168c5baed1469f5d32f45e52f6b1a00b 330 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 275 5.8E-116 T 18-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CH53_2789 704d2a95a16e3192a40388f40890a3a3 266 SMART SM00900 151 249 3.1E-34 T 18-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CH53_2789 704d2a95a16e3192a40388f40890a3a3 266 Pfam PF04205 FMN-binding domain 151 246 1.3E-15 T 18-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CH53_2789 704d2a95a16e3192a40388f40890a3a3 266 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 9 257 2.2E-99 T 18-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 CH53_2789 704d2a95a16e3192a40388f40890a3a3 266 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 10 261 36.058 T 18-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 CH53_2789 704d2a95a16e3192a40388f40890a3a3 266 PIRSF PIRSF009437 2 264 3.0E-100 T 18-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 CH53_882 0084af8aaf42d074a471a2228147a7ec 536 Gene3D G3DSA:3.10.105.10 290 511 4.2E-110 T 18-10-2018 CH53_882 0084af8aaf42d074a471a2228147a7ec 536 Gene3D G3DSA:3.40.190.10 209 523 4.2E-110 T 18-10-2018 CH53_882 0084af8aaf42d074a471a2228147a7ec 536 PIRSF PIRSF002741 1 535 4.1E-74 T 18-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CH53_882 0084af8aaf42d074a471a2228147a7ec 536 SUPERFAMILY SSF53850 29 534 1.52E-109 T 18-10-2018 CH53_882 0084af8aaf42d074a471a2228147a7ec 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 444 8.6E-79 T 18-10-2018 IPR000914 Solute-binding protein family 5 domain CH53_882 0084af8aaf42d074a471a2228147a7ec 536 Gene3D G3DSA:3.90.76.10 47 208 4.2E-110 T 18-10-2018 CH53_2930 9a17cf166ac197cb3729e5e24c88f248 354 Gene3D G3DSA:3.30.470.20 79 320 6.7E-95 T 18-10-2018 CH53_2930 9a17cf166ac197cb3729e5e24c88f248 354 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 328 1.3E-109 T 18-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CH53_2930 9a17cf166ac197cb3729e5e24c88f248 354 SUPERFAMILY SSF52440 2 74 3.17E-15 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CH53_2930 9a17cf166ac197cb3729e5e24c88f248 354 SUPERFAMILY SSF56059 79 274 1.02E-56 T 18-10-2018 CH53_2930 9a17cf166ac197cb3729e5e24c88f248 354 Gene3D G3DSA:3.40.50.20 1 70 4.5E-31 T 18-10-2018 CH53_2930 9a17cf166ac197cb3729e5e24c88f248 354 Pfam PF02222 ATP-grasp domain 88 254 1.0E-53 T 18-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CH53_2930 9a17cf166ac197cb3729e5e24c88f248 354 SUPERFAMILY SSF51246 278 353 3.37E-19 T 18-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CH53_2930 9a17cf166ac197cb3729e5e24c88f248 354 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 32.885 T 18-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CH53_2930 9a17cf166ac197cb3729e5e24c88f248 354 Gene3D G3DSA:3.30.1490.20 94 155 6.7E-95 T 18-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CH53_658 16523c400f1a95891b227422f0de6d7b 384 Gene3D G3DSA:2.40.37.30 8 380 2.9E-149 T 18-10-2018 CH53_658 16523c400f1a95891b227422f0de6d7b 384 SUPERFAMILY SSF51419 34 269 2.81E-22 T 18-10-2018 IPR029066 PLP-binding barrel CH53_658 16523c400f1a95891b227422f0de6d7b 384 Pfam PF01168 Alanine racemase, N-terminal domain 33 264 2.7E-18 T 18-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_658 16523c400f1a95891b227422f0de6d7b 384 Gene3D G3DSA:3.20.20.10 99 251 2.9E-149 T 18-10-2018 IPR029066 PLP-binding barrel CH53_3600 a3e120fcd505d4fdc75116183be35dc4 282 Pfam PF03239 Iron permease FTR1 family 1 264 6.7E-68 T 18-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 CH53_505 bff3090a4dbbc05648154d21558129ef 158 Pfam PF05232 Chlorhexidine efflux transporter 74 136 1.8E-22 T 18-10-2018 IPR007896 Chlorhexidine efflux transporter CH53_505 bff3090a4dbbc05648154d21558129ef 158 Pfam PF05232 Chlorhexidine efflux transporter 6 68 5.8E-25 T 18-10-2018 IPR007896 Chlorhexidine efflux transporter CH53_3759 40fd3c01eefbf6a6c3c45b0e1994eaf0 90 Pfam PF10762 Protein of unknown function (DUF2583) 1 87 2.0E-46 T 18-10-2018 IPR019698 Protein of unknown function DUF2583 CH53_1399 0c2c189748b724d35b9bde5236ec8fb3 334 Pfam PF01032 FecCD transport family 18 327 6.4E-95 T 18-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CH53_1399 0c2c189748b724d35b9bde5236ec8fb3 334 Gene3D G3DSA:1.10.3470.10 4 333 4.4E-132 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_1399 0c2c189748b724d35b9bde5236ec8fb3 334 SUPERFAMILY SSF81345 3 327 9.68E-88 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_1521 4b3277ce17cbc3fb13fd0c7f78c0760c 405 Gene3D G3DSA:3.90.1150.10 29 392 3.8E-156 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_1521 4b3277ce17cbc3fb13fd0c7f78c0760c 405 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 1.2E-208 T 18-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 CH53_1521 4b3277ce17cbc3fb13fd0c7f78c0760c 405 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 72.098 T 18-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CH53_1521 4b3277ce17cbc3fb13fd0c7f78c0760c 405 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CH53_1521 4b3277ce17cbc3fb13fd0c7f78c0760c 405 PIRSF PIRSF000521 28 156 2.1E-7 T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CH53_1521 4b3277ce17cbc3fb13fd0c7f78c0760c 405 PIRSF PIRSF000521 173 402 6.7E-35 T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CH53_1521 4b3277ce17cbc3fb13fd0c7f78c0760c 405 Pfam PF00202 Aminotransferase class-III 24 399 2.5E-135 T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CH53_1521 4b3277ce17cbc3fb13fd0c7f78c0760c 405 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 4.9E-153 T 18-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CH53_1521 4b3277ce17cbc3fb13fd0c7f78c0760c 405 SUPERFAMILY SSF53383 17 399 8.25E-127 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_1521 4b3277ce17cbc3fb13fd0c7f78c0760c 405 Gene3D G3DSA:3.40.640.10 59 304 3.8E-156 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_2441 9c1ac8da8e0849f9cb4942805c53d42a 487 SUPERFAMILY SSF51556 123 427 1.87E-74 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_2441 9c1ac8da8e0849f9cb4942805c53d42a 487 Gene3D G3DSA:3.20.20.140 124 427 1.1E-126 T 18-10-2018 CH53_2441 9c1ac8da8e0849f9cb4942805c53d42a 487 Gene3D G3DSA:2.30.40.10 72 477 1.1E-126 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_2441 9c1ac8da8e0849f9cb4942805c53d42a 487 SUPERFAMILY SSF51338 68 131 1.37E-9 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_2441 9c1ac8da8e0849f9cb4942805c53d42a 487 SUPERFAMILY SSF51338 414 483 6.17E-13 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_2441 9c1ac8da8e0849f9cb4942805c53d42a 487 Pfam PF01979 Amidohydrolase family 119 465 1.1E-25 T 18-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CH53_2208 bc3fee38d6a36c213104620a3b7b2607 303 SUPERFAMILY SSF46785 4 109 1.75E-23 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2208 bc3fee38d6a36c213104620a3b7b2607 303 Pfam PF03466 LysR substrate binding domain 89 292 1.6E-40 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_2208 bc3fee38d6a36c213104620a3b7b2607 303 Gene3D G3DSA:3.40.190.290 91 293 1.9E-54 T 18-10-2018 CH53_2208 bc3fee38d6a36c213104620a3b7b2607 303 Gene3D G3DSA:1.10.10.10 3 88 5.4E-28 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2208 bc3fee38d6a36c213104620a3b7b2607 303 SUPERFAMILY SSF53850 90 295 1.86E-41 T 18-10-2018 CH53_2208 bc3fee38d6a36c213104620a3b7b2607 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.9E-20 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1548 fc55e66d03e443e5a82f18c182cd6bba 293 Pfam PF11104 Type IV pilus assembly protein PilM; 9 167 4.6E-17 T 18-10-2018 IPR005883 Type IV pilus assembly protein PilM CH53_1548 fc55e66d03e443e5a82f18c182cd6bba 293 Gene3D G3DSA:3.30.420.40 8 168 2.3E-12 T 18-10-2018 CH53_1548 fc55e66d03e443e5a82f18c182cd6bba 293 SUPERFAMILY SSF53067 28 165 1.17E-5 T 18-10-2018 CH53_1548 fc55e66d03e443e5a82f18c182cd6bba 293 Gene3D G3DSA:3.30.1490.300 82 137 2.3E-12 T 18-10-2018 CH53_2008 cef8a0b7ec48898b08b09eff9441fffa 285 SUPERFAMILY SSF56931 32 284 5.62E-92 T 18-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CH53_2008 cef8a0b7ec48898b08b09eff9441fffa 285 PRINTS PR01486 Bacterial phospholipase A1 protein signature 119 138 3.7E-82 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CH53_2008 cef8a0b7ec48898b08b09eff9441fffa 285 PRINTS PR01486 Bacterial phospholipase A1 protein signature 74 91 3.7E-82 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CH53_2008 cef8a0b7ec48898b08b09eff9441fffa 285 PRINTS PR01486 Bacterial phospholipase A1 protein signature 232 249 3.7E-82 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CH53_2008 cef8a0b7ec48898b08b09eff9441fffa 285 PRINTS PR01486 Bacterial phospholipase A1 protein signature 164 182 3.7E-82 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CH53_2008 cef8a0b7ec48898b08b09eff9441fffa 285 PRINTS PR01486 Bacterial phospholipase A1 protein signature 199 217 3.7E-82 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CH53_2008 cef8a0b7ec48898b08b09eff9441fffa 285 PRINTS PR01486 Bacterial phospholipase A1 protein signature 254 274 3.7E-82 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CH53_2008 cef8a0b7ec48898b08b09eff9441fffa 285 PRINTS PR01486 Bacterial phospholipase A1 protein signature 149 163 3.7E-82 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CH53_2008 cef8a0b7ec48898b08b09eff9441fffa 285 PRINTS PR01486 Bacterial phospholipase A1 protein signature 96 112 3.7E-82 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CH53_2008 cef8a0b7ec48898b08b09eff9441fffa 285 Gene3D G3DSA:2.40.230.10 26 285 2.0E-103 T 18-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CH53_2008 cef8a0b7ec48898b08b09eff9441fffa 285 Pfam PF02253 Phospholipase A1 36 281 7.5E-96 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CH53_902 f6bcd1cdd0594d92cd741ba4594c6892 167 Gene3D G3DSA:2.60.40.1090 32 166 1.2E-28 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_902 f6bcd1cdd0594d92cd741ba4594c6892 167 SUPERFAMILY SSF49401 21 166 4.97E-33 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_3926 d40c06205aa36bb2e1484f306d00d737 688 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 1.8E-32 T 18-10-2018 IPR025299 CstA, C-terminal domain CH53_3926 d40c06205aa36bb2e1484f306d00d737 688 Pfam PF02554 Carbon starvation protein CstA 32 407 1.4E-169 T 18-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CH53_1143 3f49fbcb7ca5f826e0225eec65ccced6 398 Pfam PF07690 Major Facilitator Superfamily 17 324 8.5E-9 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_1143 3f49fbcb7ca5f826e0225eec65ccced6 398 Gene3D G3DSA:1.20.1250.20 12 190 1.7E-8 T 18-10-2018 CH53_1143 3f49fbcb7ca5f826e0225eec65ccced6 398 SUPERFAMILY SSF103473 12 385 3.92E-28 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_1143 3f49fbcb7ca5f826e0225eec65ccced6 398 Gene3D G3DSA:1.20.1250.20 199 386 7.8E-19 T 18-10-2018 CH53_1524 b01ce96d585f297f967cbe9fe77de1d7 102 Gene3D G3DSA:2.30.30.110 1 102 6.3E-34 T 18-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CH53_1524 b01ce96d585f297f967cbe9fe77de1d7 102 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 13 101 5.0E-22 T 18-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 CH53_1524 b01ce96d585f297f967cbe9fe77de1d7 102 Pfam PF01845 CcdB protein 2 101 3.0E-33 T 18-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 CH53_1524 b01ce96d585f297f967cbe9fe77de1d7 102 SUPERFAMILY SSF50118 1 102 6.54E-30 T 18-10-2018 CH53_3208 aff73a864737e6cf4a1b54333aa4cb12 570 SUPERFAMILY SSF55103 275 567 1.83E-114 T 18-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CH53_3208 aff73a864737e6cf4a1b54333aa4cb12 570 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 10 568 58.902 T 18-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CH53_3208 aff73a864737e6cf4a1b54333aa4cb12 570 Gene3D G3DSA:3.30.465.10 106 268 3.9E-77 T 18-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CH53_3208 aff73a864737e6cf4a1b54333aa4cb12 570 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 7.5E-146 T 18-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CH53_3208 aff73a864737e6cf4a1b54333aa4cb12 570 Gene3D G3DSA:3.30.43.10 2 103 1.8E-10 T 18-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 CH53_3208 aff73a864737e6cf4a1b54333aa4cb12 570 PIRSF PIRSF000101 4 569 1.7E-292 T 18-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CH53_3208 aff73a864737e6cf4a1b54333aa4cb12 570 Gene3D G3DSA:3.30.1370.20 435 519 1.2E-40 T 18-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CH53_3208 aff73a864737e6cf4a1b54333aa4cb12 570 Pfam PF01565 FAD binding domain 47 167 1.2E-7 T 18-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CH53_3208 aff73a864737e6cf4a1b54333aa4cb12 570 SUPERFAMILY SSF56176 9 271 1.64E-71 T 18-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CH53_3208 aff73a864737e6cf4a1b54333aa4cb12 570 Gene3D G3DSA:3.30.70.610 269 356 1.7E-18 T 18-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CH53_3208 aff73a864737e6cf4a1b54333aa4cb12 570 Gene3D G3DSA:3.30.70.610 357 434 2.2E-18 T 18-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CH53_2251 3e40ad8e8819a515db19b1e8db3353ce 324 Pfam PF01699 Sodium/calcium exchanger protein 175 317 4.2E-27 T 18-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CH53_2251 3e40ad8e8819a515db19b1e8db3353ce 324 Pfam PF01699 Sodium/calcium exchanger protein 5 143 5.7E-30 T 18-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CH53_2251 3e40ad8e8819a515db19b1e8db3353ce 324 Gene3D G3DSA:1.20.58.1130 8 207 1.7E-86 T 18-10-2018 CH53_2251 3e40ad8e8819a515db19b1e8db3353ce 324 Gene3D G3DSA:1.20.1420.30 35 309 1.7E-86 T 18-10-2018 CH53_2251 3e40ad8e8819a515db19b1e8db3353ce 324 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 2.3E-90 T 18-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 CH53_3729 cb63e18032d7da5dd909eeab84748213 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 1.1E-100 T 18-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CH53_3729 cb63e18032d7da5dd909eeab84748213 335 PIRSF PIRSF000267 2 335 1.1E-88 T 18-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CH53_3729 cb63e18032d7da5dd909eeab84748213 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 213 6.2E-43 T 18-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CH53_3375 0d23e8d63668bb60a947673ac8cbd9a5 378 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 24 367 1.5E-87 T 18-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CH53_3375 0d23e8d63668bb60a947673ac8cbd9a5 378 Pfam PF01888 CbiD 18 273 3.8E-94 T 18-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CH53_3375 0d23e8d63668bb60a947673ac8cbd9a5 378 SUPERFAMILY SSF111342 8 291 3.92E-88 T 18-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CH53_3375 0d23e8d63668bb60a947673ac8cbd9a5 378 PIRSF PIRSF026782 13 374 1.6E-131 T 18-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CH53_3375 0d23e8d63668bb60a947673ac8cbd9a5 378 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 17 367 31.117 T 18-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CH53_3375 0d23e8d63668bb60a947673ac8cbd9a5 378 Gene3D G3DSA:3.30.2110.10 19 188 1.4E-47 T 18-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CH53_2773 715e817bcc5c649a1f0fbc8fff50f637 256 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 4.0E-29 T 18-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CH53_2773 715e817bcc5c649a1f0fbc8fff50f637 256 SUPERFAMILY SSF56317 2 249 1.31E-60 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CH53_2773 715e817bcc5c649a1f0fbc8fff50f637 256 Gene3D G3DSA:3.60.110.10 1 256 8.2E-82 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CH53_2773 715e817bcc5c649a1f0fbc8fff50f637 256 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 137 157 - T 18-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site CH53_224 fb2ad79dd81de06192a6b2295d560603 219 SUPERFAMILY SSF56784 1 213 4.91E-27 T 18-10-2018 IPR036412 HAD-like superfamily CH53_224 fb2ad79dd81de06192a6b2295d560603 219 Gene3D G3DSA:1.20.1440.100 15 87 1.3E-64 T 18-10-2018 CH53_224 fb2ad79dd81de06192a6b2295d560603 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 1.0E-33 T 18-10-2018 CH53_224 fb2ad79dd81de06192a6b2295d560603 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 199 2.2E-47 T 18-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CH53_224 fb2ad79dd81de06192a6b2295d560603 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 188 9.5E-26 T 18-10-2018 CH53_224 fb2ad79dd81de06192a6b2295d560603 219 Gene3D G3DSA:3.40.50.1000 3 213 1.3E-64 T 18-10-2018 IPR023214 HAD superfamily CH53_2517 c1194cbbd2991b25b96b37bf83797a4f 470 PIRSF PIRSF012293 2 470 3.4E-190 T 18-10-2018 IPR009377 Ethanolamine utilisation EutA CH53_2517 c1194cbbd2991b25b96b37bf83797a4f 470 SUPERFAMILY SSF53067 8 265 1.57E-6 T 18-10-2018 CH53_2517 c1194cbbd2991b25b96b37bf83797a4f 470 Pfam PF06277 Ethanolamine utilisation protein EutA 5 468 9.0E-172 T 18-10-2018 IPR009377 Ethanolamine utilisation EutA CH53_784 77cd701bdbc33e654c839da4c0c7944a 85 Gene3D G3DSA:1.10.1200.10 4 84 1.4E-17 T 18-10-2018 IPR036736 ACP-like superfamily CH53_784 77cd701bdbc33e654c839da4c0c7944a 85 Pfam PF00550 Phosphopantetheine attachment site 7 62 2.0E-7 T 18-10-2018 IPR009081 Phosphopantetheine binding ACP domain CH53_784 77cd701bdbc33e654c839da4c0c7944a 85 SUPERFAMILY SSF47336 2 83 4.19E-11 T 18-10-2018 IPR036736 ACP-like superfamily CH53_647 66782d9d56271dad4baed78b29c0e8df 164 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 2.7E-47 T 18-10-2018 IPR000944 Transcription regulator Rrf2-type CH53_647 66782d9d56271dad4baed78b29c0e8df 164 Pfam PF02082 Transcriptional regulator 1 83 2.4E-27 T 18-10-2018 IPR000944 Transcription regulator Rrf2-type CH53_647 66782d9d56271dad4baed78b29c0e8df 164 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 164 52.162 T 18-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 CH53_647 66782d9d56271dad4baed78b29c0e8df 164 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 3.8E-67 T 18-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 CH53_647 66782d9d56271dad4baed78b29c0e8df 164 Gene3D G3DSA:1.10.10.10 1 144 3.2E-56 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_647 66782d9d56271dad4baed78b29c0e8df 164 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 18-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CH53_647 66782d9d56271dad4baed78b29c0e8df 164 SUPERFAMILY SSF46785 2 133 9.79E-37 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_4019 c6621639af9b38e246e608ed782bac0a 157 SMART SM00871 1 154 2.9E-34 T 18-10-2018 IPR010499 Bacterial transcription activator, effector binding CH53_4019 c6621639af9b38e246e608ed782bac0a 157 SUPERFAMILY SSF55136 1 155 8.2E-37 T 18-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CH53_4019 c6621639af9b38e246e608ed782bac0a 157 Pfam PF06445 GyrI-like small molecule binding domain 1 150 6.6E-28 T 18-10-2018 IPR029442 GyrI-like small molecule binding domain CH53_4019 c6621639af9b38e246e608ed782bac0a 157 Hamap MF_01896 DNA gyrase inhibitor [sbmC]. 1 156 38.75 T 18-10-2018 IPR024911 DNA gyrase inhibitor GyrI GO:0008657 CH53_4019 c6621639af9b38e246e608ed782bac0a 157 Gene3D G3DSA:3.20.80.10 1 156 1.0E-40 T 18-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CH53_2767 a61c1e50b5710fc9f95dc2890cf7e2a8 113 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 105 2.2E-16 T 18-10-2018 IPR008407 Branched-chain amino acid transport, AzlD CH53_414 bd8ead36dc899d1cac923ea3cedb73de 375 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 18-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CH53_414 bd8ead36dc899d1cac923ea3cedb73de 375 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 4.7E-29 T 18-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 CH53_414 bd8ead36dc899d1cac923ea3cedb73de 375 Gene3D G3DSA:3.40.50.720 3 277 7.0E-110 T 18-10-2018 CH53_414 bd8ead36dc899d1cac923ea3cedb73de 375 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 46.131 T 18-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 CH53_414 bd8ead36dc899d1cac923ea3cedb73de 375 Gene3D G3DSA:3.30.1370.170 293 374 1.6E-31 T 18-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 CH53_414 bd8ead36dc899d1cac923ea3cedb73de 375 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 33 278 4.3E-15 T 18-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CH53_414 bd8ead36dc899d1cac923ea3cedb73de 375 SUPERFAMILY SSF52283 7 128 1.13E-14 T 18-10-2018 CH53_414 bd8ead36dc899d1cac923ea3cedb73de 375 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 256 6.3E-31 T 18-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CH53_414 bd8ead36dc899d1cac923ea3cedb73de 375 Gene3D G3DSA:3.40.50.720 92 257 7.0E-110 T 18-10-2018 CH53_414 bd8ead36dc899d1cac923ea3cedb73de 375 SUPERFAMILY SSF51735 91 257 1.47E-33 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_414 bd8ead36dc899d1cac923ea3cedb73de 375 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 18-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CH53_2885 9fc6b073f8f14e1c06fe43fbc0c79042 285 Pfam PF00950 ABC 3 transport family 14 273 2.2E-50 T 18-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CH53_2885 9fc6b073f8f14e1c06fe43fbc0c79042 285 SUPERFAMILY SSF81345 11 270 3.14E-21 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_16 16f7e7fea57ede4b56f3bcf3c5cd6228 348 Pfam PF01979 Amidohydrolase family 15 307 8.7E-22 T 18-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CH53_16 16f7e7fea57ede4b56f3bcf3c5cd6228 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 47.423 T 18-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_16 16f7e7fea57ede4b56f3bcf3c5cd6228 348 PIRSF PIRSF001237 4 348 2.1E-142 T 18-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_16 16f7e7fea57ede4b56f3bcf3c5cd6228 348 SUPERFAMILY SSF51556 6 347 1.1E-147 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_16 16f7e7fea57ede4b56f3bcf3c5cd6228 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 1.5E-150 T 18-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_16 16f7e7fea57ede4b56f3bcf3c5cd6228 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 18-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_16 16f7e7fea57ede4b56f3bcf3c5cd6228 348 Gene3D G3DSA:3.20.20.140 6 348 6.7E-107 T 18-10-2018 CH53_3223 205975f29cc98b84c70c7e6be5c54b9d 284 SMART SM00450 7 133 1.6E-25 T 18-10-2018 IPR001763 Rhodanese-like domain CH53_3223 205975f29cc98b84c70c7e6be5c54b9d 284 SMART SM00450 156 276 1.5E-16 T 18-10-2018 IPR001763 Rhodanese-like domain CH53_3223 205975f29cc98b84c70c7e6be5c54b9d 284 Gene3D G3DSA:3.40.250.10 153 277 4.7E-38 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily CH53_3223 205975f29cc98b84c70c7e6be5c54b9d 284 Gene3D G3DSA:3.40.250.10 1 152 1.1E-48 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily CH53_3223 205975f29cc98b84c70c7e6be5c54b9d 284 SUPERFAMILY SSF52821 159 280 6.29E-32 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily CH53_3223 205975f29cc98b84c70c7e6be5c54b9d 284 ProSitePatterns PS00380 Rhodanese signature 1. 43 54 - T 18-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 CH53_3223 205975f29cc98b84c70c7e6be5c54b9d 284 SUPERFAMILY SSF52821 1 151 4.32E-42 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily CH53_3223 205975f29cc98b84c70c7e6be5c54b9d 284 Pfam PF00581 Rhodanese-like domain 8 129 5.8E-17 T 18-10-2018 IPR001763 Rhodanese-like domain CH53_3223 205975f29cc98b84c70c7e6be5c54b9d 284 Pfam PF00581 Rhodanese-like domain 158 272 1.7E-11 T 18-10-2018 IPR001763 Rhodanese-like domain CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 Gene3D G3DSA:3.50.50.60 150 271 4.3E-125 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 Gene3D G3DSA:3.30.390.30 346 467 3.9E-45 T 18-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 18-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 SUPERFAMILY SSF51905 2 337 4.26E-57 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 Gene3D G3DSA:3.50.50.60 9 332 4.3E-125 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 5.6E-35 T 18-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 SUPERFAMILY SSF55424 343 466 2.06E-38 T 18-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.2E-68 T 18-10-2018 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.2E-68 T 18-10-2018 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.2E-68 T 18-10-2018 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.2E-68 T 18-10-2018 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.2E-68 T 18-10-2018 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.2E-68 T 18-10-2018 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.2E-68 T 18-10-2018 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.2E-68 T 18-10-2018 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.2E-68 T 18-10-2018 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 PIRSF PIRSF000350 1 468 2.6E-86 T 18-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 2.2E-63 T 18-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 458 2.2E-148 T 18-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 6.2E-41 T 18-10-2018 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 6.2E-41 T 18-10-2018 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 6.2E-41 T 18-10-2018 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.2E-41 T 18-10-2018 CH53_993 1a402b262ab4c703873b6b2a41c124fd 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 6.2E-41 T 18-10-2018 CH53_3966 4a5acf4e1ba2003969f8cd083685f87f 304 Gene3D G3DSA:1.10.10.10 1 85 5.5E-31 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3966 4a5acf4e1ba2003969f8cd083685f87f 304 Gene3D G3DSA:3.40.190.10 165 272 9.3E-57 T 18-10-2018 CH53_3966 4a5acf4e1ba2003969f8cd083685f87f 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.2E-22 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3966 4a5acf4e1ba2003969f8cd083685f87f 304 SUPERFAMILY SSF46785 4 87 1.17E-23 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3966 4a5acf4e1ba2003969f8cd083685f87f 304 Gene3D G3DSA:3.40.190.10 90 282 9.3E-57 T 18-10-2018 CH53_3966 4a5acf4e1ba2003969f8cd083685f87f 304 Pfam PF03466 LysR substrate binding domain 89 296 7.8E-44 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_3966 4a5acf4e1ba2003969f8cd083685f87f 304 SUPERFAMILY SSF53850 90 298 2.64E-39 T 18-10-2018 CH53_3966 4a5acf4e1ba2003969f8cd083685f87f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.5E-10 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3966 4a5acf4e1ba2003969f8cd083685f87f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.5E-10 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3966 4a5acf4e1ba2003969f8cd083685f87f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.5E-10 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1542 30747c355d1a686753ea08b55cde1962 362 Gene3D G3DSA:3.40.50.1970 1 172 3.2E-64 T 18-10-2018 CH53_1542 30747c355d1a686753ea08b55cde1962 362 PIRSF PIRSF001455 9 359 7.3E-105 T 18-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CH53_1542 30747c355d1a686753ea08b55cde1962 362 SUPERFAMILY SSF56796 4 357 4.84E-115 T 18-10-2018 CH53_1542 30747c355d1a686753ea08b55cde1962 362 Gene3D G3DSA:1.20.1090.10 173 361 8.6E-65 T 18-10-2018 CH53_1542 30747c355d1a686753ea08b55cde1962 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 1.8E-120 T 18-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CH53_1542 30747c355d1a686753ea08b55cde1962 362 Pfam PF01761 3-dehydroquinate synthase 67 326 2.6E-108 T 18-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CH53_1542 30747c355d1a686753ea08b55cde1962 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 357 74.405 T 18-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CH53_2299 9b568c2ce50cc0f9309cc2c53a99d13d 469 Gene3D G3DSA:1.10.2020.10 46 137 9.6E-202 T 18-10-2018 CH53_2299 9b568c2ce50cc0f9309cc2c53a99d13d 469 Gene3D G3DSA:3.20.20.140 7 465 9.6E-202 T 18-10-2018 CH53_2299 9b568c2ce50cc0f9309cc2c53a99d13d 469 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 49.343 T 18-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CH53_2299 9b568c2ce50cc0f9309cc2c53a99d13d 469 SUPERFAMILY SSF51556 3 465 4.08E-180 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_2299 9b568c2ce50cc0f9309cc2c53a99d13d 469 Pfam PF02614 Glucuronate isomerase 1 465 4.7E-228 T 18-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CH53_2137 55a617206f61c06c58309cd303be2d7e 307 Pfam PF01758 Sodium Bile acid symporter family 36 213 1.3E-39 T 18-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CH53_2137 55a617206f61c06c58309cd303be2d7e 307 Gene3D G3DSA:1.20.1530.20 1 307 8.5E-120 T 18-10-2018 IPR038770 Sodium/solute symporter superfamily CH53_1819 c395af5b20573daeee9f714e21012519 238 SMART SM00421 148 205 1.0E-5 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1819 c395af5b20573daeee9f714e21012519 238 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 2.5E-11 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1819 c395af5b20573daeee9f714e21012519 238 Gene3D G3DSA:1.10.10.10 145 211 2.5E-13 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1819 c395af5b20573daeee9f714e21012519 238 SUPERFAMILY SSF46894 139 210 7.82E-14 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_1819 c395af5b20573daeee9f714e21012519 238 Pfam PF08448 PAS fold 16 125 2.7E-10 T 18-10-2018 IPR013656 PAS fold-4 CH53_2123 487b17951684f3d9c806c42137302f94 575 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 5.6E-254 T 18-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CH53_2123 487b17951684f3d9c806c42137302f94 575 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 43.94 T 18-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CH53_2123 487b17951684f3d9c806c42137302f94 575 PIRSF PIRSF000719 1 575 1.0E-298 T 18-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CH53_2123 487b17951684f3d9c806c42137302f94 575 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 7 572 0.0 T 18-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CH53_3979 4470ef5bdd98ee5b3eae4f50997efeba 152 Pfam PF00583 Acetyltransferase (GNAT) family 39 136 6.2E-16 T 18-10-2018 IPR000182 GNAT domain CH53_3979 4470ef5bdd98ee5b3eae4f50997efeba 152 Gene3D G3DSA:3.40.630.30 5 149 7.5E-36 T 18-10-2018 CH53_3979 4470ef5bdd98ee5b3eae4f50997efeba 152 SUPERFAMILY SSF55729 9 136 2.16E-30 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_1269 c79ef02a22de963ae4fbb5207ed4eefc 173 PIRSF PIRSF025550 1 173 1.3E-80 T 18-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT CH53_1269 c79ef02a22de963ae4fbb5207ed4eefc 173 SUPERFAMILY SSF55718 42 137 1.88E-22 T 18-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CH53_1269 c79ef02a22de963ae4fbb5207ed4eefc 173 Pfam PF02036 SCP-2 sterol transfer family 45 133 1.5E-19 T 18-10-2018 IPR003033 SCP2 sterol-binding domain CH53_1269 c79ef02a22de963ae4fbb5207ed4eefc 173 Gene3D G3DSA:3.30.1050.10 57 138 3.6E-8 T 18-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CH53_252 8c2042b735378df9a51806ea68681553 490 SUPERFAMILY SSF48179 283 487 1.5E-65 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_252 8c2042b735378df9a51806ea68681553 490 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 1.5E-22 T 18-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CH53_252 8c2042b735378df9a51806ea68681553 490 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 1.5E-22 T 18-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CH53_252 8c2042b735378df9a51806ea68681553 490 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 1.5E-22 T 18-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CH53_252 8c2042b735378df9a51806ea68681553 490 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 1.5E-22 T 18-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CH53_252 8c2042b735378df9a51806ea68681553 490 Gene3D G3DSA:3.40.50.720 8 281 1.0E-103 T 18-10-2018 CH53_252 8c2042b735378df9a51806ea68681553 490 Gene3D G3DSA:1.10.1040.10 282 490 4.9E-78 T 18-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CH53_252 8c2042b735378df9a51806ea68681553 490 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 18-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CH53_252 8c2042b735378df9a51806ea68681553 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 4.1E-42 T 18-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CH53_252 8c2042b735378df9a51806ea68681553 490 SUPERFAMILY SSF51735 4 282 1.18E-93 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_252 8c2042b735378df9a51806ea68681553 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 461 1.4E-96 T 18-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CH53_2778 b94a076a6b211a0d4ebbeedb3d91d2a7 346 SUPERFAMILY SSF100950 16 339 3.61E-105 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_2778 b94a076a6b211a0d4ebbeedb3d91d2a7 346 Pfam PF01008 Initiation factor 2 subunit family 53 334 7.3E-65 T 18-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 CH53_2778 b94a076a6b211a0d4ebbeedb3d91d2a7 346 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 13 345 35.721 T 18-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CH53_2778 b94a076a6b211a0d4ebbeedb3d91d2a7 346 Gene3D G3DSA:1.20.120.1840 8 179 1.0E-40 T 18-10-2018 CH53_2778 b94a076a6b211a0d4ebbeedb3d91d2a7 346 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 13 333 2.9E-124 T 18-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CH53_2778 b94a076a6b211a0d4ebbeedb3d91d2a7 346 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 41 334 1.3E-90 T 18-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CH53_2778 b94a076a6b211a0d4ebbeedb3d91d2a7 346 Gene3D G3DSA:3.40.50.10470 180 340 6.5E-53 T 18-10-2018 CH53_3459 cdaf3dbab2ea93fcafcf49deb5af32f5 143 SUPERFAMILY SSF55804 4 141 4.06E-26 T 18-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CH53_3459 cdaf3dbab2ea93fcafcf49deb5af32f5 143 Gene3D G3DSA:3.40.930.10 1 143 1.4E-27 T 18-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CH53_3459 cdaf3dbab2ea93fcafcf49deb5af32f5 143 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 142 8.1E-21 T 18-10-2018 IPR002178 PTS EIIA type-2 domain CH53_2851 b4f8fd264a31bef3c476acdbae0fd21b 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 18-10-2018 IPR030470 UbiA prenyltransferase conserved site CH53_2851 b4f8fd264a31bef3c476acdbae0fd21b 296 Gene3D G3DSA:1.10.357.140 13 181 4.7E-19 T 18-10-2018 CH53_2851 b4f8fd264a31bef3c476acdbae0fd21b 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 18.398 T 18-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CH53_2851 b4f8fd264a31bef3c476acdbae0fd21b 296 Pfam PF01040 UbiA prenyltransferase family 18 266 2.2E-60 T 18-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CH53_2851 b4f8fd264a31bef3c476acdbae0fd21b 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 281 4.1E-92 T 18-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CH53_2759 b50908e5b5be4393a1c16cd0687b2f38 451 PIRSF PIRSF000850 1 451 1.9E-256 T 18-10-2018 CH53_2759 b50908e5b5be4393a1c16cd0687b2f38 451 Pfam PF13091 PLD-like domain 257 402 2.9E-21 T 18-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CH53_2759 b50908e5b5be4393a1c16cd0687b2f38 451 SMART SM00155 352 379 0.0025 T 18-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CH53_2759 b50908e5b5be4393a1c16cd0687b2f38 451 SMART SM00155 133 159 0.0049 T 18-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CH53_2759 b50908e5b5be4393a1c16cd0687b2f38 451 SUPERFAMILY SSF56024 10 210 6.28E-25 T 18-10-2018 CH53_2759 b50908e5b5be4393a1c16cd0687b2f38 451 SUPERFAMILY SSF56024 252 393 1.29E-18 T 18-10-2018 CH53_2759 b50908e5b5be4393a1c16cd0687b2f38 451 Gene3D G3DSA:3.30.870.10 24 232 4.7E-174 T 18-10-2018 CH53_2759 b50908e5b5be4393a1c16cd0687b2f38 451 Gene3D G3DSA:3.30.870.10 18 447 4.7E-174 T 18-10-2018 CH53_885 dd072d2f9bd8575e151d5c353171cd1d 82 Pfam PF00550 Phosphopantetheine attachment site 10 75 9.1E-10 T 18-10-2018 IPR009081 Phosphopantetheine binding ACP domain CH53_885 dd072d2f9bd8575e151d5c353171cd1d 82 SUPERFAMILY SSF47336 4 80 7.07E-14 T 18-10-2018 IPR036736 ACP-like superfamily CH53_885 dd072d2f9bd8575e151d5c353171cd1d 82 Gene3D G3DSA:1.10.1200.10 1 82 1.0E-12 T 18-10-2018 IPR036736 ACP-like superfamily CH53_1153 604d81986d4bba2c7ba0d2a8199c2bc0 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 248 2.2E-15 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH53_1153 604d81986d4bba2c7ba0d2a8199c2bc0 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 354 3.0E-97 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CH53_1153 604d81986d4bba2c7ba0d2a8199c2bc0 360 Gene3D G3DSA:2.40.50.100 56 188 5.7E-74 T 18-10-2018 CH53_1153 604d81986d4bba2c7ba0d2a8199c2bc0 360 Gene3D G3DSA:1.10.287.470 90 149 5.7E-74 T 18-10-2018 CH53_1153 604d81986d4bba2c7ba0d2a8199c2bc0 360 SUPERFAMILY SSF111369 48 203 4.45E-24 T 18-10-2018 CH53_1153 604d81986d4bba2c7ba0d2a8199c2bc0 360 Gene3D G3DSA:2.40.420.20 34 350 5.7E-74 T 18-10-2018 CH53_1153 604d81986d4bba2c7ba0d2a8199c2bc0 360 Gene3D G3DSA:2.40.30.170 41 268 5.7E-74 T 18-10-2018 CH53_2475 f285ef591c29f6feb8d0b4f6b6efeea7 409 SUPERFAMILY SSF103473 14 394 4.84E-40 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_2475 f285ef591c29f6feb8d0b4f6b6efeea7 409 Pfam PF07690 Major Facilitator Superfamily 17 358 2.6E-30 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_2475 f285ef591c29f6feb8d0b4f6b6efeea7 409 Gene3D G3DSA:1.20.1250.20 14 393 5.5E-38 T 18-10-2018 CH53_2252 2732923ccebdc7bc946ff9383cfae80e 269 Gene3D G3DSA:3.40.50.300 6 249 3.4E-63 T 18-10-2018 CH53_2252 2732923ccebdc7bc946ff9383cfae80e 269 Pfam PF00005 ABC transporter 26 172 5.7E-29 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2252 2732923ccebdc7bc946ff9383cfae80e 269 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2252 2732923ccebdc7bc946ff9383cfae80e 269 SMART SM00382 33 230 4.7E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2252 2732923ccebdc7bc946ff9383cfae80e 269 SUPERFAMILY SSF52540 8 236 2.72E-62 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2183 d7e4d1cb5ca4ff0764ada9087a1fd87d 470 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 464 2.5E-115 T 18-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CH53_2183 d7e4d1cb5ca4ff0764ada9087a1fd87d 470 Pfam PF00939 Sodium:sulfate symporter transmembrane region 7 470 7.2E-145 T 18-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CH53_2183 d7e4d1cb5ca4ff0764ada9087a1fd87d 470 PIRSF PIRSF002457 2 470 2.9E-135 T 18-10-2018 IPR030676 Citrate carrier CitT-related CH53_3561 300e3fd3d09d7e2e4a1feffce46fc1de 326 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 139 4.4E-23 T 18-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CH53_3561 300e3fd3d09d7e2e4a1feffce46fc1de 326 SUPERFAMILY SSF64518 1 324 3.01E-57 T 18-10-2018 CH53_3561 300e3fd3d09d7e2e4a1feffce46fc1de 326 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 200 2.4E-70 T 18-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 CH53_3561 300e3fd3d09d7e2e4a1feffce46fc1de 326 Gene3D G3DSA:1.20.1330.10 40 272 6.2E-67 T 18-10-2018 CH53_2203 c9e72bc3305eee841ddccaf2a9320bef 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 31.266 T 18-10-2018 IPR003697 Maf-like protein GO:0047429 CH53_2203 c9e72bc3305eee841ddccaf2a9320bef 197 PIRSF PIRSF006305 1 191 6.7E-51 T 18-10-2018 IPR003697 Maf-like protein GO:0047429 CH53_2203 c9e72bc3305eee841ddccaf2a9320bef 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 1.2E-61 T 18-10-2018 IPR003697 Maf-like protein GO:0047429 CH53_2203 c9e72bc3305eee841ddccaf2a9320bef 197 Gene3D G3DSA:3.90.950.10 2 190 7.1E-73 T 18-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CH53_2203 c9e72bc3305eee841ddccaf2a9320bef 197 Pfam PF02545 Maf-like protein 4 184 2.8E-56 T 18-10-2018 IPR003697 Maf-like protein GO:0047429 CH53_2203 c9e72bc3305eee841ddccaf2a9320bef 197 SUPERFAMILY SSF52972 2 184 1.31E-59 T 18-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CH53_1696 96bce6e20be51cf9d5555b10c8a4f95a 304 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.603 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_1696 96bce6e20be51cf9d5555b10c8a4f95a 304 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 9.1E-150 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_1696 96bce6e20be51cf9d5555b10c8a4f95a 304 Gene3D G3DSA:3.30.930.10 1 214 3.8E-110 T 18-10-2018 CH53_1696 96bce6e20be51cf9d5555b10c8a4f95a 304 Gene3D G3DSA:1.20.58.180 215 297 4.9E-34 T 18-10-2018 CH53_1696 96bce6e20be51cf9d5555b10c8a4f95a 304 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 1.3E-175 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_1696 96bce6e20be51cf9d5555b10c8a4f95a 304 SUPERFAMILY SSF55681 8 292 4.03E-134 T 18-10-2018 CH53_1696 96bce6e20be51cf9d5555b10c8a4f95a 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.1E-71 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_1696 96bce6e20be51cf9d5555b10c8a4f95a 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.1E-71 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_1696 96bce6e20be51cf9d5555b10c8a4f95a 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.1E-71 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_1696 96bce6e20be51cf9d5555b10c8a4f95a 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.1E-71 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_1696 96bce6e20be51cf9d5555b10c8a4f95a 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.1E-71 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_1696 96bce6e20be51cf9d5555b10c8a4f95a 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.1E-71 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CH53_1924 45540b95a16b24c84aa4654e0f0fbc25 108 SUPERFAMILY SSF143100 5 71 4.19E-8 T 18-10-2018 IPR035069 TTHA1013/TTHA0281-like CH53_1924 45540b95a16b24c84aa4654e0f0fbc25 108 Pfam PF05534 HicB family 58 102 3.6E-16 T 18-10-2018 IPR008651 Uncharacterised protein family HicB CH53_1924 45540b95a16b24c84aa4654e0f0fbc25 108 SUPERFAMILY SSF47598 71 106 6.12E-7 T 18-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 CH53_3320 bbf6b807064b416de248724ea0c8daf6 298 Gene3D G3DSA:3.40.50.720 8 284 1.2E-84 T 18-10-2018 CH53_3320 bbf6b807064b416de248724ea0c8daf6 298 Gene3D G3DSA:3.90.25.10 173 291 1.2E-84 T 18-10-2018 CH53_3320 bbf6b807064b416de248724ea0c8daf6 298 Pfam PF16363 GDP-mannose 4,6 dehydratase 9 279 6.1E-40 T 18-10-2018 IPR016040 NAD(P)-binding domain CH53_3320 bbf6b807064b416de248724ea0c8daf6 298 SUPERFAMILY SSF51735 2 296 2.52E-63 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1532 3c8264a5d10f2e23e7e055c0db9c8535 431 Gene3D G3DSA:3.20.20.140 63 370 3.7E-184 T 18-10-2018 CH53_1532 3c8264a5d10f2e23e7e055c0db9c8535 431 SUPERFAMILY SSF51556 62 381 9.72E-107 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_1532 3c8264a5d10f2e23e7e055c0db9c8535 431 Gene3D G3DSA:2.30.40.10 16 416 3.7E-184 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_1532 3c8264a5d10f2e23e7e055c0db9c8535 431 Pfam PF07969 Amidohydrolase family 51 409 7.4E-54 T 18-10-2018 IPR013108 Amidohydrolase 3 CH53_1532 3c8264a5d10f2e23e7e055c0db9c8535 431 SUPERFAMILY SSF51338 11 67 2.21E-6 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_3540 b3ff4e2319c29712e41bdc98bff693e1 287 PIRSF PIRSF000410 7 285 1.8E-99 T 18-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR CH53_3540 b3ff4e2319c29712e41bdc98bff693e1 287 SUPERFAMILY SSF53335 92 281 2.97E-59 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_3540 b3ff4e2319c29712e41bdc98bff693e1 287 SMART SM00138 24 284 4.3E-116 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CH53_3540 b3ff4e2319c29712e41bdc98bff693e1 287 Gene3D G3DSA:3.40.50.150 91 284 6.9E-72 T 18-10-2018 CH53_3540 b3ff4e2319c29712e41bdc98bff693e1 287 PRINTS PR00996 Glutamate methyltransferase family signature 224 238 3.4E-45 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CH53_3540 b3ff4e2319c29712e41bdc98bff693e1 287 PRINTS PR00996 Glutamate methyltransferase family signature 46 59 3.4E-45 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CH53_3540 b3ff4e2319c29712e41bdc98bff693e1 287 PRINTS PR00996 Glutamate methyltransferase family signature 152 168 3.4E-45 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CH53_3540 b3ff4e2319c29712e41bdc98bff693e1 287 PRINTS PR00996 Glutamate methyltransferase family signature 243 266 3.4E-45 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CH53_3540 b3ff4e2319c29712e41bdc98bff693e1 287 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 3.4E-45 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CH53_3540 b3ff4e2319c29712e41bdc98bff693e1 287 PRINTS PR00996 Glutamate methyltransferase family signature 85 97 3.4E-45 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CH53_3540 b3ff4e2319c29712e41bdc98bff693e1 287 Gene3D G3DSA:1.10.155.10 11 90 7.0E-33 T 18-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily CH53_3540 b3ff4e2319c29712e41bdc98bff693e1 287 Pfam PF01739 CheR methyltransferase, SAM binding domain 92 279 2.3E-59 T 18-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CH53_3540 b3ff4e2319c29712e41bdc98bff693e1 287 Pfam PF03705 CheR methyltransferase, all-alpha domain 26 77 7.4E-20 T 18-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CH53_3540 b3ff4e2319c29712e41bdc98bff693e1 287 SUPERFAMILY SSF47757 15 91 3.53E-25 T 18-10-2018 CH53_4112 76e5678930fff73dccca25b0616ed592 406 Gene3D G3DSA:3.90.1150.10 8 398 4.7E-169 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_4112 76e5678930fff73dccca25b0616ed592 406 Pfam PF00266 Aminotransferase class-V 26 394 1.2E-156 T 18-10-2018 IPR000192 Aminotransferase class V domain CH53_4112 76e5678930fff73dccca25b0616ed592 406 SUPERFAMILY SSF53383 4 401 2.89E-124 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_4112 76e5678930fff73dccca25b0616ed592 406 Hamap MF_01831 Cysteine desulfurase [sufS]. 1 406 72.544 T 18-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CH53_4112 76e5678930fff73dccca25b0616ed592 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 405 9.7E-180 T 18-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CH53_4112 76e5678930fff73dccca25b0616ed592 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 217 236 - T 18-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CH53_4112 76e5678930fff73dccca25b0616ed592 406 Gene3D G3DSA:3.40.640.10 36 297 4.7E-169 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_1888 4d70ce2e47f857d299776f6d393dcd87 329 Gene3D G3DSA:3.40.190.10 114 325 2.7E-140 T 18-10-2018 CH53_1888 4d70ce2e47f857d299776f6d393dcd87 329 Pfam PF13531 Bacterial extracellular solute-binding protein 33 280 4.6E-46 T 18-10-2018 CH53_1888 4d70ce2e47f857d299776f6d393dcd87 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 18-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 CH53_1888 4d70ce2e47f857d299776f6d393dcd87 329 SUPERFAMILY SSF53850 21 326 9.12E-92 T 18-10-2018 CH53_1888 4d70ce2e47f857d299776f6d393dcd87 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 13 326 3.9E-177 T 18-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CH53_1888 4d70ce2e47f857d299776f6d393dcd87 329 Gene3D G3DSA:3.40.190.10 27 295 2.7E-140 T 18-10-2018 CH53_622 ba6c4542b8af5126f736ebaafc537b2b 459 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.082 T 18-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CH53_622 ba6c4542b8af5126f736ebaafc537b2b 459 Pfam PF02601 Exonuclease VII, large subunit 126 440 3.2E-99 T 18-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CH53_622 ba6c4542b8af5126f736ebaafc537b2b 459 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 359 3.9E-135 T 18-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CH53_622 ba6c4542b8af5126f736ebaafc537b2b 459 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 1.3E-32 T 18-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CH53_2432 5967e81f5f862956e999fe53a8c02757 252 Pfam PF00005 ABC transporter 17 164 3.4E-28 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2432 5967e81f5f862956e999fe53a8c02757 252 SMART SM00382 26 213 1.4E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2432 5967e81f5f862956e999fe53a8c02757 252 Gene3D G3DSA:3.40.50.300 1 252 1.9E-65 T 18-10-2018 CH53_2432 5967e81f5f862956e999fe53a8c02757 252 SUPERFAMILY SSF52540 1 225 4.77E-59 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1433 2570a79250d42df3694f34f37070471c 404 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 5 402 7.9E-86 T 18-10-2018 IPR012843 Type III secretion system YscD/HrpQ CH53_1433 2570a79250d42df3694f34f37070471c 404 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 159 399 1.3E-16 T 18-10-2018 IPR032034 Yop protein translocation protein D, periplasmic domain CH53_3436 214711f2f4172034755ed41df67b6bc5 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.1E-21 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3436 214711f2f4172034755ed41df67b6bc5 210 Pfam PF00072 Response regulator receiver domain 5 113 4.9E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3436 214711f2f4172034755ed41df67b6bc5 210 SMART SM00421 147 204 7.7E-25 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3436 214711f2f4172034755ed41df67b6bc5 210 SMART SM00448 3 116 1.1E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3436 214711f2f4172034755ed41df67b6bc5 210 Gene3D G3DSA:3.40.50.12740 4 210 1.2E-54 T 18-10-2018 CH53_3436 214711f2f4172034755ed41df67b6bc5 210 SUPERFAMILY SSF52172 2 131 4.27E-31 T 18-10-2018 IPR011006 CheY-like superfamily CH53_3436 214711f2f4172034755ed41df67b6bc5 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3436 214711f2f4172034755ed41df67b6bc5 210 SUPERFAMILY SSF46894 141 210 1.5E-20 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_3436 214711f2f4172034755ed41df67b6bc5 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 5.2E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3436 214711f2f4172034755ed41df67b6bc5 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 5.2E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3436 214711f2f4172034755ed41df67b6bc5 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 5.2E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1629 faebde2fc0f50d36013c62a7d813e07d 239 PRINTS PR00969 Pili chaperone signature 29 38 4.8E-34 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1629 faebde2fc0f50d36013c62a7d813e07d 239 PRINTS PR00969 Pili chaperone signature 78 99 4.8E-34 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1629 faebde2fc0f50d36013c62a7d813e07d 239 PRINTS PR00969 Pili chaperone signature 106 123 4.8E-34 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1629 faebde2fc0f50d36013c62a7d813e07d 239 PRINTS PR00969 Pili chaperone signature 167 182 4.8E-34 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1629 faebde2fc0f50d36013c62a7d813e07d 239 PRINTS PR00969 Pili chaperone signature 132 147 4.8E-34 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_1629 faebde2fc0f50d36013c62a7d813e07d 239 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 150 3.7E-46 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_1629 faebde2fc0f50d36013c62a7d813e07d 239 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 105 122 - T 18-10-2018 IPR018046 Pili assembly chaperone, conserved site CH53_1629 faebde2fc0f50d36013c62a7d813e07d 239 Gene3D G3DSA:2.60.40.10 153 234 1.5E-20 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_1629 faebde2fc0f50d36013c62a7d813e07d 239 SUPERFAMILY SSF49354 24 150 1.21E-45 T 18-10-2018 IPR008962 PapD-like superfamily CH53_1629 faebde2fc0f50d36013c62a7d813e07d 239 Gene3D G3DSA:2.60.40.10 30 150 6.8E-46 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_1629 faebde2fc0f50d36013c62a7d813e07d 239 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 173 230 2.3E-14 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_1629 faebde2fc0f50d36013c62a7d813e07d 239 SUPERFAMILY SSF49584 152 233 3.14E-20 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_1108 02eae06273af40668fbd0cdc3f49692b 302 SUPERFAMILY SSF46785 5 89 1.59E-21 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1108 02eae06273af40668fbd0cdc3f49692b 302 Pfam PF03466 LysR substrate binding domain 89 286 7.1E-42 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_1108 02eae06273af40668fbd0cdc3f49692b 302 Gene3D G3DSA:1.10.10.10 3 92 2.7E-28 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1108 02eae06273af40668fbd0cdc3f49692b 302 SUPERFAMILY SSF53850 89 289 4.71E-43 T 18-10-2018 CH53_1108 02eae06273af40668fbd0cdc3f49692b 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 7.0E-20 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1108 02eae06273af40668fbd0cdc3f49692b 302 Gene3D G3DSA:3.40.190.290 93 289 1.2E-60 T 18-10-2018 CH53_70 932252e09261d3b166e12cb191034239 593 Gene3D G3DSA:3.40.50.1220 187 358 1.7E-47 T 18-10-2018 CH53_70 932252e09261d3b166e12cb191034239 593 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 2.2E-32 T 18-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CH53_70 932252e09261d3b166e12cb191034239 593 SUPERFAMILY SSF52518 4 184 3.74E-48 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_70 932252e09261d3b166e12cb191034239 593 SUPERFAMILY SSF52518 369 571 7.61E-50 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_70 932252e09261d3b166e12cb191034239 593 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 172 1.0E-52 T 18-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CH53_70 932252e09261d3b166e12cb191034239 593 SUPERFAMILY SSF52467 157 361 9.82E-48 T 18-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH53_70 932252e09261d3b166e12cb191034239 593 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 329 2.6E-36 T 18-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CH53_70 932252e09261d3b166e12cb191034239 593 Gene3D G3DSA:3.40.50.970 359 582 7.7E-64 T 18-10-2018 CH53_70 932252e09261d3b166e12cb191034239 593 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 4 588 0.0 T 18-10-2018 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47 CH53_70 932252e09261d3b166e12cb191034239 593 Gene3D G3DSA:3.40.50.970 3 171 1.7E-67 T 18-10-2018 CH53_491 c3b71844554f882cc878fd071c85e2fe 808 SUPERFAMILY SSF53706 56 690 1.57E-157 T 18-10-2018 CH53_491 c3b71844554f882cc878fd071c85e2fe 808 Gene3D G3DSA:2.40.40.20 663 808 1.5E-41 T 18-10-2018 CH53_491 c3b71844554f882cc878fd071c85e2fe 808 Gene3D G3DSA:3.40.50.740 366 615 7.2E-45 T 18-10-2018 CH53_491 c3b71844554f882cc878fd071c85e2fe 808 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 59 77 - T 18-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 CH53_491 c3b71844554f882cc878fd071c85e2fe 808 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 42 2.0E-5 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CH53_491 c3b71844554f882cc878fd071c85e2fe 808 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 725 752 - T 18-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CH53_491 c3b71844554f882cc878fd071c85e2fe 808 Pfam PF00384 Molybdopterin oxidoreductase 117 567 5.9E-79 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_491 c3b71844554f882cc878fd071c85e2fe 808 SUPERFAMILY SSF50692 634 807 1.74E-38 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CH53_491 c3b71844554f882cc878fd071c85e2fe 808 Gene3D G3DSA:3.40.50.740 50 326 3.1E-75 T 18-10-2018 CH53_491 c3b71844554f882cc878fd071c85e2fe 808 SMART SM00926 54 114 3.9E-8 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_491 c3b71844554f882cc878fd071c85e2fe 808 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 12 808 0.0 T 18-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 CH53_491 c3b71844554f882cc878fd071c85e2fe 808 Pfam PF01568 Molydopterin dinucleotide binding domain 689 800 5.9E-27 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CH53_491 c3b71844554f882cc878fd071c85e2fe 808 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 58 113 8.8E-8 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_1529 a3adb278aa35dca5442c2e4a0d2f529a 680 Gene3D G3DSA:2.40.170.20 184 680 4.9E-63 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH53_1529 a3adb278aa35dca5442c2e4a0d2f529a 680 SUPERFAMILY SSF56935 59 680 1.25E-90 T 18-10-2018 CH53_1529 a3adb278aa35dca5442c2e4a0d2f529a 680 Gene3D G3DSA:2.170.130.10 68 179 1.9E-13 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CH53_1529 a3adb278aa35dca5442c2e4a0d2f529a 680 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 73 680 1.5E-257 T 18-10-2018 IPR010100 TonB-dependent copper receptor CH53_1529 a3adb278aa35dca5442c2e4a0d2f529a 680 Pfam PF00593 TonB dependent receptor 226 679 1.6E-41 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CH53_1529 a3adb278aa35dca5442c2e4a0d2f529a 680 Pfam PF07715 TonB-dependent Receptor Plug Domain 85 172 3.6E-13 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain CH53_71 f2b34dfa441c3033c1d4ff17a12c0330 272 SMART SM00346 21 111 2.4E-29 T 18-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CH53_71 f2b34dfa441c3033c1d4ff17a12c0330 272 Gene3D G3DSA:1.10.10.10 19 93 2.7E-15 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_71 f2b34dfa441c3033c1d4ff17a12c0330 272 SUPERFAMILY SSF46785 22 95 7.44E-13 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_71 f2b34dfa441c3033c1d4ff17a12c0330 272 Gene3D G3DSA:3.30.450.40 94 269 4.7E-62 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_71 f2b34dfa441c3033c1d4ff17a12c0330 272 SUPERFAMILY SSF55781 86 266 3.73E-51 T 18-10-2018 CH53_71 f2b34dfa441c3033c1d4ff17a12c0330 272 Pfam PF09339 IclR helix-turn-helix domain 23 74 8.7E-11 T 18-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CH53_71 f2b34dfa441c3033c1d4ff17a12c0330 272 Pfam PF01614 Bacterial transcriptional regulator 141 263 2.5E-38 T 18-10-2018 IPR014757 Transcription regulator IclR, C-terminal CH53_3585 9ce999ca13c8f532a638160c647e69ba 986 SUPERFAMILY SSF55781 438 590 1.03E-8 T 18-10-2018 CH53_3585 9ce999ca13c8f532a638160c647e69ba 986 SUPERFAMILY SSF109604 602 683 1.22E-7 T 18-10-2018 CH53_3585 9ce999ca13c8f532a638160c647e69ba 986 SMART SM00471 606 916 1.3E-4 T 18-10-2018 IPR003607 HD/PDEase domain CH53_3585 9ce999ca13c8f532a638160c647e69ba 986 Pfam PF13487 HD domain 833 898 3.4E-20 T 18-10-2018 CH53_3585 9ce999ca13c8f532a638160c647e69ba 986 Gene3D G3DSA:1.10.3210.10 590 694 2.0E-18 T 18-10-2018 CH53_3585 9ce999ca13c8f532a638160c647e69ba 986 Gene3D G3DSA:1.10.3210.10 824 954 8.2E-24 T 18-10-2018 CH53_3585 9ce999ca13c8f532a638160c647e69ba 986 SUPERFAMILY SSF109604 835 940 3.77E-6 T 18-10-2018 CH53_3585 9ce999ca13c8f532a638160c647e69ba 986 SMART SM00065 435 589 0.005 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_3585 9ce999ca13c8f532a638160c647e69ba 986 Gene3D G3DSA:3.30.450.20 230 273 1.9E-11 T 18-10-2018 CH53_3585 9ce999ca13c8f532a638160c647e69ba 986 Gene3D G3DSA:3.30.450.40 426 589 3.1E-9 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_3585 9ce999ca13c8f532a638160c647e69ba 986 Gene3D G3DSA:1.20.1480.50 334 425 7.2E-9 T 18-10-2018 CH53_3585 9ce999ca13c8f532a638160c647e69ba 986 Gene3D G3DSA:3.30.450.20 176 229 1.9E-11 T 18-10-2018 CH53_3535 d43f11d6b7c6c10d8837651cb1cfb8fe 397 Gene3D G3DSA:3.30.1330.60 106 293 9.4E-62 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_3535 d43f11d6b7c6c10d8837651cb1cfb8fe 397 SUPERFAMILY SSF103088 155 263 1.28E-17 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_3535 d43f11d6b7c6c10d8837651cb1cfb8fe 397 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 66 4.8E-21 T 18-10-2018 IPR025713 Motility protein B, N-terminal domain CH53_3535 d43f11d6b7c6c10d8837651cb1cfb8fe 397 Pfam PF00691 OmpA family 159 253 1.5E-11 T 18-10-2018 IPR006665 OmpA-like domain CH53_4088 bea8e9c5545620481e3f950376665ec3 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 3.0E-7 T 18-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CH53_4088 bea8e9c5545620481e3f950376665ec3 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 3.0E-7 T 18-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CH53_4088 bea8e9c5545620481e3f950376665ec3 298 Gene3D G3DSA:3.20.20.100 2 298 4.6E-107 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CH53_4088 bea8e9c5545620481e3f950376665ec3 298 SUPERFAMILY SSF51430 10 295 2.36E-72 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CH53_4088 bea8e9c5545620481e3f950376665ec3 298 Pfam PF00248 Aldo/keto reductase family 17 291 1.4E-62 T 18-10-2018 IPR023210 NADP-dependent oxidoreductase domain CH53_157 c85b20ddc348b9734cc52f48ef33bd67 361 PIRSF PIRSF000525 1 361 9.8E-152 T 18-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CH53_157 c85b20ddc348b9734cc52f48ef33bd67 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 51.871 T 18-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CH53_157 c85b20ddc348b9734cc52f48ef33bd67 361 Gene3D G3DSA:3.90.1150.10 258 361 9.1E-42 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_157 c85b20ddc348b9734cc52f48ef33bd67 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 6.6E-158 T 18-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CH53_157 c85b20ddc348b9734cc52f48ef33bd67 361 Gene3D G3DSA:3.40.640.10 17 257 4.0E-92 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_157 c85b20ddc348b9734cc52f48ef33bd67 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 18-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CH53_157 c85b20ddc348b9734cc52f48ef33bd67 361 Pfam PF00266 Aminotransferase class-V 4 349 3.8E-67 T 18-10-2018 IPR000192 Aminotransferase class V domain CH53_157 c85b20ddc348b9734cc52f48ef33bd67 361 SUPERFAMILY SSF53383 3 361 1.12E-120 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_66 92c130cb5312a27e0684d57a6d783e29 453 TIGRFAM TIGR03178 allantoinase: allantoinase 4 449 1.0E-195 T 18-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 CH53_66 92c130cb5312a27e0684d57a6d783e29 453 SUPERFAMILY SSF51338 3 448 6.43E-31 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_66 92c130cb5312a27e0684d57a6d783e29 453 Gene3D G3DSA:2.30.40.10 1 57 8.3E-12 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_66 92c130cb5312a27e0684d57a6d783e29 453 SUPERFAMILY SSF51556 54 379 1.03E-98 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_66 92c130cb5312a27e0684d57a6d783e29 453 Gene3D G3DSA:3.20.20.140 58 418 3.1E-141 T 18-10-2018 CH53_66 92c130cb5312a27e0684d57a6d783e29 453 Pfam PF01979 Amidohydrolase family 50 431 6.9E-22 T 18-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CH53_66 92c130cb5312a27e0684d57a6d783e29 453 Hamap MF_01645 Allantoinase [allB]. 2 450 52.801 T 18-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 CH53_1561 860234beb09d618edb5bcade565923d1 74 Pfam PF04023 FeoA domain 7 63 2.9E-7 T 18-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CH53_1561 860234beb09d618edb5bcade565923d1 74 SUPERFAMILY SSF50037 5 70 4.58E-15 T 18-10-2018 IPR008988 Transcriptional repressor, C-terminal CH53_1561 860234beb09d618edb5bcade565923d1 74 Gene3D G3DSA:2.30.30.90 1 73 1.1E-28 T 18-10-2018 IPR038157 Ferrous iron transporter, core domain CH53_1561 860234beb09d618edb5bcade565923d1 74 SMART SM00899 1 72 2.1E-8 T 18-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CH53_1899 696aec1b61332128c4472720ea03fbcd 305 PIRSF PIRSF005355 1 305 2.0E-88 T 18-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 CH53_1899 696aec1b61332128c4472720ea03fbcd 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 18 301 1.5E-128 T 18-10-2018 CH53_1899 696aec1b61332128c4472720ea03fbcd 305 Pfam PF01040 UbiA prenyltransferase family 29 277 9.2E-37 T 18-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CH53_1899 696aec1b61332128c4472720ea03fbcd 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 9 302 21.182 T 18-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CH53_4038 f2bf1135f2bf9169b163e675b82e5340 201 Pfam PF02525 Flavodoxin-like fold 3 196 2.1E-47 T 18-10-2018 IPR003680 Flavodoxin-like fold CH53_4038 f2bf1135f2bf9169b163e675b82e5340 201 Gene3D G3DSA:3.40.50.360 1 201 3.0E-66 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_4038 f2bf1135f2bf9169b163e675b82e5340 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.899 T 18-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 CH53_4038 f2bf1135f2bf9169b163e675b82e5340 201 SUPERFAMILY SSF52218 1 199 1.03E-58 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_20 283b6796255f7e20af456634a464d7f7 195 Pfam PF00196 Bacterial regulatory proteins, luxR family 134 184 8.7E-13 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_20 283b6796255f7e20af456634a464d7f7 195 Gene3D G3DSA:1.10.10.10 100 191 4.3E-13 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_20 283b6796255f7e20af456634a464d7f7 195 SUPERFAMILY SSF46894 127 189 2.14E-14 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_20 283b6796255f7e20af456634a464d7f7 195 SMART SM00421 131 188 2.4E-7 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 SUPERFAMILY SSF52021 3 143 1.44E-56 T 18-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 Gene3D G3DSA:3.50.30.20 2 151 3.8E-61 T 18-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 7.5E-150 T 18-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.0E-40 T 18-10-2018 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.0E-40 T 18-10-2018 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.0E-40 T 18-10-2018 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.0E-40 T 18-10-2018 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.0E-40 T 18-10-2018 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.1E-51 T 18-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 18-10-2018 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 18-10-2018 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 18-10-2018 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.5 T 18-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 Pfam PF00117 Glutamine amidotransferase class-I 197 372 2.9E-49 T 18-10-2018 IPR017926 Glutamine amidotransferase CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 SMART SM01097 3 133 2.3E-90 T 18-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 SUPERFAMILY SSF52317 153 378 3.21E-64 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 Gene3D G3DSA:3.40.50.880 152 379 5.4E-76 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.4E-11 T 18-10-2018 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.4E-11 T 18-10-2018 CH53_1066 9903575b2e118fea484417f8ca46f1d1 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.4E-11 T 18-10-2018 CH53_1510 d60b72c951e756a7e1e4936d6ecefc9f 293 Gene3D G3DSA:1.10.3720.10 89 286 3.9E-29 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1510 d60b72c951e756a7e1e4936d6ecefc9f 293 SUPERFAMILY SSF161098 93 275 1.44E-35 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1510 d60b72c951e756a7e1e4936d6ecefc9f 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 287 1.7E-25 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_3212 f670e6b49b0348da9bb96a1d6f1b39fd 82 Pfam PF04226 Transglycosylase associated protein 33 81 1.5E-14 T 18-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 CH53_694 7f1cc6694162da6daaab25f84f72224d 228 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 18-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CH53_694 7f1cc6694162da6daaab25f84f72224d 228 Gene3D G3DSA:3.40.470.10 1 228 6.9E-105 T 18-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CH53_694 7f1cc6694162da6daaab25f84f72224d 228 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.169 T 18-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CH53_694 7f1cc6694162da6daaab25f84f72224d 228 SUPERFAMILY SSF52141 5 221 1.46E-94 T 18-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CH53_694 7f1cc6694162da6daaab25f84f72224d 228 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 2.0E-87 T 18-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CH53_694 7f1cc6694162da6daaab25f84f72224d 228 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 2.3E-24 T 18-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CH53_694 7f1cc6694162da6daaab25f84f72224d 228 SMART SM00986 49 210 3.2E-42 T 18-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CH53_694 7f1cc6694162da6daaab25f84f72224d 228 SMART SM00987 49 210 3.2E-42 T 18-10-2018 CH53_3029 a238e5732e454146bfff2d99f71dc6db 363 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 335 1.9E-88 T 18-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CH53_3029 a238e5732e454146bfff2d99f71dc6db 363 Gene3D G3DSA:3.20.20.70 4 363 1.5E-143 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3029 a238e5732e454146bfff2d99f71dc6db 363 SUPERFAMILY SSF51395 2 359 1.89E-120 T 18-10-2018 CH53_2004 d831edc987e8457184ca03bed5defd4a 157 Gene3D G3DSA:2.60.120.10 19 128 1.1E-10 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_2004 d831edc987e8457184ca03bed5defd4a 157 SUPERFAMILY SSF51182 27 121 8.07E-19 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_2004 d831edc987e8457184ca03bed5defd4a 157 Pfam PF05523 WxcM-like, C-terminal 51 119 3.8E-5 T 18-10-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 CH53_2004 d831edc987e8457184ca03bed5defd4a 157 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 4 132 6.1E-50 T 18-10-2018 IPR027565 Cupin fold metalloprotein, WbuC family CH53_4290 4349bdf2d217deb8a6b2413fe3384b94 211 Pfam PF14834 Glutathione S-transferase, C-terminal domain 95 211 2.9E-51 T 18-10-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|KEGG: 00983+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 CH53_4290 4349bdf2d217deb8a6b2413fe3384b94 211 SUPERFAMILY SSF47616 90 207 1.35E-13 T 18-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CH53_4290 4349bdf2d217deb8a6b2413fe3384b94 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 86 4.9E-12 T 18-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CH53_4290 4349bdf2d217deb8a6b2413fe3384b94 211 Gene3D G3DSA:3.40.30.10 8 206 2.1E-85 T 18-10-2018 CH53_4290 4349bdf2d217deb8a6b2413fe3384b94 211 Gene3D G3DSA:1.20.1050.10 90 198 2.1E-85 T 18-10-2018 CH53_4290 4349bdf2d217deb8a6b2413fe3384b94 211 SUPERFAMILY SSF52833 5 113 3.68E-18 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_3526 52c94cad2190cfb1bcaa9214100a777d 63 Pfam PF10781 Dextransucrase DSRB 1 60 6.8E-38 T 18-10-2018 IPR019717 Dextransucrase DSRB CH53_3526 52c94cad2190cfb1bcaa9214100a777d 63 Hamap MF_01549 Protein DsrB [dsrB]. 1 62 27.264 T 18-10-2018 IPR019717 Dextransucrase DSRB CH53_1489 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 18-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1489 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 18-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1489 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 18-10-2018 IPR036838 Ribosomal protein S10 domain superfamily CH53_1489 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 18-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1489 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 18-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1489 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 18-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1489 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 1 103 3.9E-38 T 18-10-2018 IPR036838 Ribosomal protein S10 domain superfamily CH53_1489 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 18-10-2018 IPR027486 Ribosomal protein S10 domain CH53_1489 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 18-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1489 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.1E-35 T 18-10-2018 IPR027486 Ribosomal protein S10 domain CH53_1246 1cf2820367df5c331c124b77419c13f0 277 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 9 53 9.1E-9 T 18-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CH53_1246 1cf2820367df5c331c124b77419c13f0 277 Gene3D G3DSA:1.10.3720.10 64 272 1.4E-23 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1246 1cf2820367df5c331c124b77419c13f0 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 274 1.4E-28 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_1246 1cf2820367df5c331c124b77419c13f0 277 SUPERFAMILY SSF161098 71 256 1.31E-27 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2083 b3c5eacd180170b658c187fe398a7724 183 SUPERFAMILY SSF55729 2 171 2.16E-21 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_2083 b3c5eacd180170b658c187fe398a7724 183 Gene3D G3DSA:3.40.630.30 1 173 1.2E-40 T 18-10-2018 CH53_2083 b3c5eacd180170b658c187fe398a7724 183 Pfam PF13673 Acetyltransferase (GNAT) domain 47 149 4.3E-11 T 18-10-2018 IPR000182 GNAT domain CH53_2054 ede4f0f0f4cb339f83fcd54e3468d2a3 253 Pfam PF01048 Phosphorylase superfamily 21 245 1.2E-38 T 18-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CH53_2054 ede4f0f0f4cb339f83fcd54e3468d2a3 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 3.5E-127 T 18-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 CH53_2054 ede4f0f0f4cb339f83fcd54e3468d2a3 253 SUPERFAMILY SSF53167 6 250 1.13E-73 T 18-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CH53_2054 ede4f0f0f4cb339f83fcd54e3468d2a3 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 18-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_2054 ede4f0f0f4cb339f83fcd54e3468d2a3 253 Gene3D G3DSA:3.40.50.1580 1 253 5.7E-80 T 18-10-2018 CH53_1027 46656ca3ad53850cb3b746ee78ca6099 152 SUPERFAMILY SSF89447 1 138 3.77E-46 T 18-10-2018 IPR037914 SpoVT-AbrB domain superfamily CH53_1027 46656ca3ad53850cb3b746ee78ca6099 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 1.6E-23 T 18-10-2018 IPR020603 MraZ domain CH53_1027 46656ca3ad53850cb3b746ee78ca6099 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 142 1.5E-20 T 18-10-2018 IPR020603 MraZ domain CH53_1027 46656ca3ad53850cb3b746ee78ca6099 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 1.4E-63 T 18-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CH53_1027 46656ca3ad53850cb3b746ee78ca6099 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 141 1.0E-78 T 18-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CH53_1027 46656ca3ad53850cb3b746ee78ca6099 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 58.058 T 18-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CH53_1027 46656ca3ad53850cb3b746ee78ca6099 152 Gene3D G3DSA:2.40.330.20 1 150 3.2E-43 T 18-10-2018 IPR038619 MraZ superfamily CH53_2464 056f0fe6c12bfc0fdd8d725bc2f96ece 80 Gene3D G3DSA:3.40.50.1110 3 77 3.7E-7 T 18-10-2018 IPR036514 SGNH hydrolase superfamily CH53_2464 056f0fe6c12bfc0fdd8d725bc2f96ece 80 SUPERFAMILY SSF52266 24 75 2.14E-9 T 18-10-2018 CH53_2046 6f9d0cced34be0fb2fae6921464c2956 281 SUPERFAMILY SSF161098 4 277 3.18E-58 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2046 6f9d0cced34be0fb2fae6921464c2956 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 276 1.5E-20 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_2046 6f9d0cced34be0fb2fae6921464c2956 281 Gene3D G3DSA:1.10.3720.10 2 274 6.5E-53 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2619 70d318fdf5a455f4d9e0ba4eede7af13 404 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 18-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CH53_2619 70d318fdf5a455f4d9e0ba4eede7af13 404 Pfam PF01494 FAD binding domain 4 347 1.3E-27 T 18-10-2018 IPR002938 FAD-binding domain GO:0071949 CH53_2619 70d318fdf5a455f4d9e0ba4eede7af13 404 SUPERFAMILY SSF51905 4 387 2.87E-60 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2619 70d318fdf5a455f4d9e0ba4eede7af13 404 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 394 2.0E-137 T 18-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CH53_2619 70d318fdf5a455f4d9e0ba4eede7af13 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 1.9E-19 T 18-10-2018 CH53_2619 70d318fdf5a455f4d9e0ba4eede7af13 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 1.9E-19 T 18-10-2018 CH53_2619 70d318fdf5a455f4d9e0ba4eede7af13 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.9E-19 T 18-10-2018 CH53_2619 70d318fdf5a455f4d9e0ba4eede7af13 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 1.9E-19 T 18-10-2018 CH53_2619 70d318fdf5a455f4d9e0ba4eede7af13 404 Gene3D G3DSA:3.50.50.60 259 404 6.3E-50 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2619 70d318fdf5a455f4d9e0ba4eede7af13 404 Gene3D G3DSA:3.50.50.60 1 251 1.3E-81 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_3456 56e463ad3ac8cd2e8b821563c1fa8977 249 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 134 206 6.0E-12 T 18-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CH53_3456 56e463ad3ac8cd2e8b821563c1fa8977 249 SUPERFAMILY SSF56214 132 217 1.92E-15 T 18-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CH53_3456 56e463ad3ac8cd2e8b821563c1fa8977 249 Gene3D G3DSA:3.90.470.20 129 234 2.3E-6 T 18-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CH53_3456 56e463ad3ac8cd2e8b821563c1fa8977 249 PRINTS PR01399 Enterobactin synthetase component D signature 60 80 6.5E-9 T 18-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 CH53_3456 56e463ad3ac8cd2e8b821563c1fa8977 249 PRINTS PR01399 Enterobactin synthetase component D signature 90 108 6.5E-9 T 18-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 CH53_1258 3d26da4d37e3f1cd78e1b19dba475937 250 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 1 248 2.4E-118 T 18-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK CH53_1258 3d26da4d37e3f1cd78e1b19dba475937 250 Pfam PF00005 ABC transporter 15 171 1.1E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1258 3d26da4d37e3f1cd78e1b19dba475937 250 Gene3D G3DSA:3.40.50.300 1 250 3.0E-66 T 18-10-2018 CH53_1258 3d26da4d37e3f1cd78e1b19dba475937 250 PIRSF PIRSF037116 1 250 1.2E-139 T 18-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK CH53_1258 3d26da4d37e3f1cd78e1b19dba475937 250 SMART SM00382 23 221 4.6E-15 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1258 3d26da4d37e3f1cd78e1b19dba475937 250 SUPERFAMILY SSF52540 1 246 1.95E-55 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1258 3d26da4d37e3f1cd78e1b19dba475937 250 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2199 b551912ccdf38fe8db8a66775b516891 639 SUPERFAMILY SSF55073 230 383 8.37E-20 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_2199 b551912ccdf38fe8db8a66775b516891 639 SMART SM00267 213 382 1.2E-19 T 18-10-2018 IPR000160 GGDEF domain CH53_2199 b551912ccdf38fe8db8a66775b516891 639 SUPERFAMILY SSF141868 399 630 2.75E-33 T 18-10-2018 IPR035919 EAL domain superfamily CH53_2199 b551912ccdf38fe8db8a66775b516891 639 Pfam PF00563 EAL domain 400 627 1.4E-36 T 18-10-2018 IPR001633 EAL domain CH53_2199 b551912ccdf38fe8db8a66775b516891 639 SMART SM00052 392 632 1.8E-24 T 18-10-2018 IPR001633 EAL domain CH53_2199 b551912ccdf38fe8db8a66775b516891 639 Gene3D G3DSA:3.30.70.270 207 383 3.6E-22 T 18-10-2018 CH53_2199 b551912ccdf38fe8db8a66775b516891 639 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 33 130 5.8E-33 T 18-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 CH53_2199 b551912ccdf38fe8db8a66775b516891 639 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 376 2.7E-23 T 18-10-2018 IPR000160 GGDEF domain CH53_2199 b551912ccdf38fe8db8a66775b516891 639 Gene3D G3DSA:3.20.20.450 391 628 2.4E-30 T 18-10-2018 IPR035919 EAL domain superfamily CH53_1587 ef94d952ad6bf712f6c97fd161418523 170 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 164 2.4E-68 T 18-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 CH53_1587 ef94d952ad6bf712f6c97fd161418523 170 Pfam PF01202 Shikimate kinase 12 166 5.8E-14 T 18-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CH53_1587 ef94d952ad6bf712f6c97fd161418523 170 PRINTS PR01100 Shikimate kinase family signature 6 21 8.9E-6 T 18-10-2018 CH53_1587 ef94d952ad6bf712f6c97fd161418523 170 PRINTS PR01100 Shikimate kinase family signature 100 117 8.9E-6 T 18-10-2018 CH53_1587 ef94d952ad6bf712f6c97fd161418523 170 Gene3D G3DSA:3.40.50.300 2 169 2.0E-68 T 18-10-2018 CH53_1587 ef94d952ad6bf712f6c97fd161418523 170 SUPERFAMILY SSF52540 3 165 1.38E-28 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3758 46dc5512cb558539163ecf8272dfcec2 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 35.725 T 18-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CH53_3758 46dc5512cb558539163ecf8272dfcec2 196 SUPERFAMILY SSF53178 4 193 1.57E-69 T 18-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 CH53_3758 46dc5512cb558539163ecf8272dfcec2 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 18-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CH53_3758 46dc5512cb558539163ecf8272dfcec2 196 Gene3D G3DSA:3.40.50.1470 1 195 7.2E-73 T 18-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 CH53_3758 46dc5512cb558539163ecf8272dfcec2 196 Pfam PF01195 Peptidyl-tRNA hydrolase 6 189 5.7E-53 T 18-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CH53_3758 46dc5512cb558539163ecf8272dfcec2 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 191 1.4E-68 T 18-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CH53_3758 46dc5512cb558539163ecf8272dfcec2 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 18-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CH53_1713 f7a07b067c661897e6bd8385c4fc10f7 382 SUPERFAMILY SSF51604 95 357 6.55E-74 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CH53_1713 f7a07b067c661897e6bd8385c4fc10f7 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 18-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CH53_1713 f7a07b067c661897e6bd8385c4fc10f7 382 SUPERFAMILY SSF54826 1 112 8.46E-32 T 18-10-2018 CH53_1713 f7a07b067c661897e6bd8385c4fc10f7 382 Gene3D G3DSA:3.30.390.10 11 372 1.9E-147 T 18-10-2018 IPR029017 Enolase-like, N-terminal CH53_1713 f7a07b067c661897e6bd8385c4fc10f7 382 Pfam PF13378 Enolase C-terminal domain-like 137 355 2.0E-54 T 18-10-2018 IPR029065 Enolase C-terminal domain-like CH53_1713 f7a07b067c661897e6bd8385c4fc10f7 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 2.3E-27 T 18-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CH53_1713 f7a07b067c661897e6bd8385c4fc10f7 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 18-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CH53_1713 f7a07b067c661897e6bd8385c4fc10f7 382 Gene3D G3DSA:3.20.20.120 102 344 1.9E-147 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CH53_1713 f7a07b067c661897e6bd8385c4fc10f7 382 SMART SM00922 125 230 9.9E-16 T 18-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CH53_1713 f7a07b067c661897e6bd8385c4fc10f7 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 75.694 T 18-10-2018 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6 CH53_258 ca9ac3aa5901418956ceb0993b0139e0 533 SUPERFAMILY SSF141868 271 517 2.35E-71 T 18-10-2018 IPR035919 EAL domain superfamily CH53_258 ca9ac3aa5901418956ceb0993b0139e0 533 Pfam PF00563 EAL domain 272 505 6.2E-63 T 18-10-2018 IPR001633 EAL domain CH53_258 ca9ac3aa5901418956ceb0993b0139e0 533 Pfam PF12792 CSS motif domain associated with EAL 46 240 1.3E-33 T 18-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CH53_258 ca9ac3aa5901418956ceb0993b0139e0 533 SMART SM00052 265 510 2.0E-81 T 18-10-2018 IPR001633 EAL domain CH53_258 ca9ac3aa5901418956ceb0993b0139e0 533 Gene3D G3DSA:3.20.20.450 265 523 7.7E-76 T 18-10-2018 IPR035919 EAL domain superfamily CH53_4276 25e891def425164b16b63b10304d14b6 237 Gene3D G3DSA:1.10.1710.10 1 131 8.8E-25 T 18-10-2018 IPR036442 ProQ/FinO domain superfamily CH53_4276 25e891def425164b16b63b10304d14b6 237 SMART SM00945 5 119 5.0E-61 T 18-10-2018 IPR016103 ProQ/FinO domain CH53_4276 25e891def425164b16b63b10304d14b6 237 Pfam PF17516 ProQ C-terminal domain 187 237 7.9E-25 T 18-10-2018 IPR035236 RNA chaperone ProQ, C-terminal CH53_4276 25e891def425164b16b63b10304d14b6 237 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 237 30.988 T 18-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 CH53_4276 25e891def425164b16b63b10304d14b6 237 SUPERFAMILY SSF48657 5 119 1.96E-39 T 18-10-2018 IPR036442 ProQ/FinO domain superfamily CH53_4276 25e891def425164b16b63b10304d14b6 237 Pfam PF04352 ProQ/FINO family 8 115 7.6E-43 T 18-10-2018 IPR016103 ProQ/FinO domain CH53_2652 d20c1429dafe275092279f77b3ac3987 127 SUPERFAMILY SSF46785 18 124 4.02E-29 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2652 d20c1429dafe275092279f77b3ac3987 127 Pfam PF01638 HxlR-like helix-turn-helix 32 120 1.8E-25 T 18-10-2018 IPR002577 Helix-turn-helix, HxlR type CH53_2652 d20c1429dafe275092279f77b3ac3987 127 Gene3D G3DSA:1.10.10.10 7 127 8.3E-35 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_990 8e52f654412150bf51e481e9bfdfd420 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 2.6E-66 T 18-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CH53_990 8e52f654412150bf51e481e9bfdfd420 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 18-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CH53_990 8e52f654412150bf51e481e9bfdfd420 865 Gene3D G3DSA:3.30.499.10 683 865 7.9E-76 T 18-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CH53_990 8e52f654412150bf51e481e9bfdfd420 865 Gene3D G3DSA:3.40.1060.10 385 681 2.8E-152 T 18-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CH53_990 8e52f654412150bf51e481e9bfdfd420 865 Gene3D G3DSA:1.25.40.310 1 161 2.6E-73 T 18-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CH53_990 8e52f654412150bf51e481e9bfdfd420 865 SUPERFAMILY SSF52016 163 370 1.26E-69 T 18-10-2018 CH53_990 8e52f654412150bf51e481e9bfdfd420 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 7.7E-40 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_990 8e52f654412150bf51e481e9bfdfd420 865 PIRSF PIRSF036687 1 859 0.0 T 18-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CH53_990 8e52f654412150bf51e481e9bfdfd420 865 SUPERFAMILY SSF74778 2 160 3.01E-67 T 18-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CH53_990 8e52f654412150bf51e481e9bfdfd420 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 18-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CH53_990 8e52f654412150bf51e481e9bfdfd420 865 Gene3D G3DSA:3.30.499.10 402 529 2.8E-152 T 18-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CH53_990 8e52f654412150bf51e481e9bfdfd420 865 Gene3D G3DSA:3.20.19.10 162 361 4.3E-79 T 18-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CH53_990 8e52f654412150bf51e481e9bfdfd420 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 8.0E-96 T 18-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CH53_990 8e52f654412150bf51e481e9bfdfd420 865 SUPERFAMILY SSF53732 379 859 6.15E-151 T 18-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CH53_990 8e52f654412150bf51e481e9bfdfd420 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 18-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CH53_4404 91e85d55d8c309efb58caaece6138bcb 456 Gene3D G3DSA:1.10.275.10 1 117 1.8E-53 T 18-10-2018 IPR024083 Fumarase/histidase, N-terminal CH53_4404 91e85d55d8c309efb58caaece6138bcb 456 Gene3D G3DSA:1.10.40.30 382 445 2.5E-157 T 18-10-2018 CH53_4404 91e85d55d8c309efb58caaece6138bcb 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 3.6E-52 T 18-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 CH53_4404 91e85d55d8c309efb58caaece6138bcb 456 SUPERFAMILY SSF48557 10 454 9.58E-105 T 18-10-2018 IPR008948 L-Aspartase-like GO:0003824 CH53_4404 91e85d55d8c309efb58caaece6138bcb 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 18-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CH53_4404 91e85d55d8c309efb58caaece6138bcb 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.7E-17 T 18-10-2018 IPR000362 Fumarate lyase family CH53_4404 91e85d55d8c309efb58caaece6138bcb 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.7E-17 T 18-10-2018 IPR000362 Fumarate lyase family CH53_4404 91e85d55d8c309efb58caaece6138bcb 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.7E-17 T 18-10-2018 IPR000362 Fumarate lyase family CH53_4404 91e85d55d8c309efb58caaece6138bcb 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.7E-17 T 18-10-2018 IPR000362 Fumarate lyase family CH53_4404 91e85d55d8c309efb58caaece6138bcb 456 Pfam PF00206 Lyase 14 312 7.7E-77 T 18-10-2018 IPR022761 Fumarate lyase, N-terminal CH53_4404 91e85d55d8c309efb58caaece6138bcb 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 6.0E-151 T 18-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CH53_4404 91e85d55d8c309efb58caaece6138bcb 456 Gene3D G3DSA:1.20.200.10 118 446 2.5E-157 T 18-10-2018 CH53_3075 7e3c02f6738f650583803be7caf3cc18 246 SUPERFAMILY SSF161098 24 223 3.27E-37 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3075 7e3c02f6738f650583803be7caf3cc18 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 132 2.5E-15 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CH53_3075 7e3c02f6738f650583803be7caf3cc18 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 237 2.8E-25 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_3075 7e3c02f6738f650583803be7caf3cc18 246 Gene3D G3DSA:1.10.3720.10 18 238 2.7E-44 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1164 1c69957863a706dfc9c1fb9274b3aa29 291 Gene3D G3DSA:3.20.20.70 1 291 6.1E-100 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_1164 1c69957863a706dfc9c1fb9274b3aa29 291 Hamap MF_02052 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [lsrF]. 1 291 75.339 T 18-10-2018 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase GO:0016747 CH53_1164 1c69957863a706dfc9c1fb9274b3aa29 291 SMART SM01133 51 259 9.5E-28 T 18-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CH53_1164 1c69957863a706dfc9c1fb9274b3aa29 291 Pfam PF01791 DeoC/LacD family aldolase 52 258 5.2E-18 T 18-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CH53_1164 1c69957863a706dfc9c1fb9274b3aa29 291 PIRSF PIRSF038992 31 288 9.1E-78 T 18-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CH53_1164 1c69957863a706dfc9c1fb9274b3aa29 291 SUPERFAMILY SSF51569 35 274 6.96E-62 T 18-10-2018 CH53_285 975443373834d2a1d7f2263d05ec8211 468 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 21 120 3.0E-47 T 18-10-2018 IPR009826 DNA circulation, N-terminal CH53_285 975443373834d2a1d7f2263d05ec8211 468 Pfam PF07157 DNA circularisation protein N-terminus 25 118 7.5E-34 T 18-10-2018 IPR009826 DNA circulation, N-terminal CH53_641 133436b9674ee09e7af4e43c50465fb1 111 Gene3D G3DSA:3.10.20.30 1 111 1.4E-37 T 18-10-2018 IPR012675 Beta-grasp domain superfamily CH53_641 133436b9674ee09e7af4e43c50465fb1 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 18-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CH53_641 133436b9674ee09e7af4e43c50465fb1 111 SUPERFAMILY SSF54292 4 109 1.4E-35 T 18-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CH53_641 133436b9674ee09e7af4e43c50465fb1 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 92 7.3E-16 T 18-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CH53_641 133436b9674ee09e7af4e43c50465fb1 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 4.7E-62 T 18-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 CH53_641 133436b9674ee09e7af4e43c50465fb1 111 PRINTS PR00355 Adrenodoxin signature 42 52 5.4E-10 T 18-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CH53_641 133436b9674ee09e7af4e43c50465fb1 111 PRINTS PR00355 Adrenodoxin signature 60 74 5.4E-10 T 18-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CH53_641 133436b9674ee09e7af4e43c50465fb1 111 PRINTS PR00355 Adrenodoxin signature 83 91 5.4E-10 T 18-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CH53_2943 d742ee9da24fd37b0dc23c1bf2809131 264 Pfam PF12833 Helix-turn-helix domain 184 260 3.2E-19 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_2943 d742ee9da24fd37b0dc23c1bf2809131 264 Gene3D G3DSA:2.60.120.10 5 97 9.0E-8 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_2943 d742ee9da24fd37b0dc23c1bf2809131 264 Pfam PF02311 AraC-like ligand binding domain 38 106 1.7E-7 T 18-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CH53_2943 d742ee9da24fd37b0dc23c1bf2809131 264 SUPERFAMILY SSF51182 24 205 2.99E-15 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_2943 d742ee9da24fd37b0dc23c1bf2809131 264 SUPERFAMILY SSF46689 216 260 3.94E-7 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_2943 d742ee9da24fd37b0dc23c1bf2809131 264 Gene3D G3DSA:1.10.10.60 162 264 1.0E-18 T 18-10-2018 CH53_2943 d742ee9da24fd37b0dc23c1bf2809131 264 SMART SM00342 178 260 4.5E-17 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_4006 74b44d7d293627a468fef7d9890650b4 555 SUPERFAMILY SSF52518 357 552 1.91E-66 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_4006 74b44d7d293627a468fef7d9890650b4 555 Gene3D G3DSA:3.40.50.1220 183 360 4.5E-58 T 18-10-2018 CH53_4006 74b44d7d293627a468fef7d9890650b4 555 Gene3D G3DSA:3.40.50.970 1 177 1.8E-69 T 18-10-2018 CH53_4006 74b44d7d293627a468fef7d9890650b4 555 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 419 438 - T 18-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CH53_4006 74b44d7d293627a468fef7d9890650b4 555 Gene3D G3DSA:3.40.50.970 361 554 6.9E-61 T 18-10-2018 CH53_4006 74b44d7d293627a468fef7d9890650b4 555 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 326 5.6E-42 T 18-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CH53_4006 74b44d7d293627a468fef7d9890650b4 555 SUPERFAMILY SSF52518 1 177 2.31E-60 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_4006 74b44d7d293627a468fef7d9890650b4 555 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 1.0E-59 T 18-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CH53_4006 74b44d7d293627a468fef7d9890650b4 555 SUPERFAMILY SSF52467 186 350 2.31E-55 T 18-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH53_4006 74b44d7d293627a468fef7d9890650b4 555 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 553 9.0E-201 T 18-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CH53_4006 74b44d7d293627a468fef7d9890650b4 555 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 382 530 1.1E-48 T 18-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CH53_3305 68b5304a5e6c9607240fbe7dc6a2d070 452 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 448 2.3E-130 T 18-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CH53_3305 68b5304a5e6c9607240fbe7dc6a2d070 452 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 438 4.0E-178 T 18-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 CH53_1504 40fdef8f2fef2776f04e0888ac4739ba 602 Pfam PF00999 Sodium/hydrogen exchanger family 10 373 6.4E-66 T 18-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CH53_1504 40fdef8f2fef2776f04e0888ac4739ba 602 Gene3D G3DSA:3.40.50.720 400 561 2.5E-35 T 18-10-2018 CH53_1504 40fdef8f2fef2776f04e0888ac4739ba 602 SUPERFAMILY SSF51735 402 529 6.39E-30 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1504 40fdef8f2fef2776f04e0888ac4739ba 602 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 6.2E-88 T 18-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CH53_1504 40fdef8f2fef2776f04e0888ac4739ba 602 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 599 50.256 T 18-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 CH53_1504 40fdef8f2fef2776f04e0888ac4739ba 602 Gene3D G3DSA:1.20.1530.20 3 385 1.1E-81 T 18-10-2018 IPR038770 Sodium/solute symporter superfamily CH53_1504 40fdef8f2fef2776f04e0888ac4739ba 602 Pfam PF02254 TrkA-N domain 403 513 2.4E-24 T 18-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CH53_836 39de97d2491711cf4ed730f85a153207 206 SUPERFAMILY SSF89155 3 206 1.57E-54 T 18-10-2018 IPR036411 TorD-like superfamily CH53_836 39de97d2491711cf4ed730f85a153207 206 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 6 206 43.259 T 18-10-2018 IPR028611 Tat proofreading chaperone DmsD GO:0005048 CH53_836 39de97d2491711cf4ed730f85a153207 206 Gene3D G3DSA:1.10.3480.10 2 206 8.6E-53 T 18-10-2018 CH53_836 39de97d2491711cf4ed730f85a153207 206 Pfam PF02613 Nitrate reductase delta subunit 47 161 4.1E-22 T 18-10-2018 IPR020945 DMSO/Nitrate reductase chaperone CH53_836 39de97d2491711cf4ed730f85a153207 206 PIRSF PIRSF004690 1 206 6.3E-66 T 18-10-2018 IPR026269 Tat proofreading chaperone DmsD-type CH53_1643 4288dea3f9b9c3403237e8e58af5b7cd 300 SUPERFAMILY SSF161098 93 280 1.57E-29 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1643 4288dea3f9b9c3403237e8e58af5b7cd 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 3.3E-14 T 18-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CH53_1643 4288dea3f9b9c3403237e8e58af5b7cd 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 7.1E-30 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_1643 4288dea3f9b9c3403237e8e58af5b7cd 300 Gene3D G3DSA:1.10.3720.10 88 295 9.2E-24 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3132 98d83c65344b992741261cef9b8d967d 316 SMART SM00797 23 298 3.2E-139 T 18-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CH53_3132 98d83c65344b992741261cef9b8d967d 316 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 307 4.2E-118 T 18-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CH53_3132 98d83c65344b992741261cef9b8d967d 316 SUPERFAMILY SSF50891 173 288 1.06E-11 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily CH53_3132 98d83c65344b992741261cef9b8d967d 316 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 24 281 1.3E-89 T 18-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CH53_3132 98d83c65344b992741261cef9b8d967d 316 Gene3D G3DSA:2.40.100.10 170 310 1.4E-54 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily CH53_3792 0b4800532573409737e0e51f978fe12f 267 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 24 262 2.3E-124 T 18-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CH53_3792 0b4800532573409737e0e51f978fe12f 267 SUPERFAMILY SSF53335 40 262 5.42E-41 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_3792 0b4800532573409737e0e51f978fe12f 267 Pfam PF13649 Methyltransferase domain 80 178 1.1E-13 T 18-10-2018 CH53_3792 0b4800532573409737e0e51f978fe12f 267 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 23 262 42.814 T 18-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CH53_3792 0b4800532573409737e0e51f978fe12f 267 Gene3D G3DSA:3.40.50.150 38 267 3.3E-67 T 18-10-2018 CH53_3792 0b4800532573409737e0e51f978fe12f 267 PIRSF PIRSF006325 21 263 1.2E-132 T 18-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CH53_3698 933eca7b751e14ab2bef0aee07ac565e 315 Gene3D G3DSA:3.40.50.2300 152 276 8.0E-21 T 18-10-2018 CH53_3698 933eca7b751e14ab2bef0aee07ac565e 315 SUPERFAMILY SSF47413 2 59 3.71E-15 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_3698 933eca7b751e14ab2bef0aee07ac565e 315 Gene3D G3DSA:3.40.50.2300 56 290 8.0E-21 T 18-10-2018 CH53_3698 933eca7b751e14ab2bef0aee07ac565e 315 Gene3D G3DSA:1.10.260.40 3 55 1.5E-18 T 18-10-2018 CH53_3698 933eca7b751e14ab2bef0aee07ac565e 315 Pfam PF13377 Periplasmic binding protein-like domain 161 301 4.6E-10 T 18-10-2018 CH53_3698 933eca7b751e14ab2bef0aee07ac565e 315 SUPERFAMILY SSF53822 59 296 1.61E-19 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_3698 933eca7b751e14ab2bef0aee07ac565e 315 SMART SM00354 1 71 1.5E-22 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_3698 933eca7b751e14ab2bef0aee07ac565e 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.0E-17 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_97 b918173e69bddb07e514aff5f8f7567a 512 Gene3D G3DSA:3.20.20.450 253 504 1.4E-83 T 18-10-2018 IPR035919 EAL domain superfamily CH53_97 b918173e69bddb07e514aff5f8f7567a 512 SUPERFAMILY SSF141868 258 501 5.62E-76 T 18-10-2018 IPR035919 EAL domain superfamily CH53_97 b918173e69bddb07e514aff5f8f7567a 512 Pfam PF00563 EAL domain 258 490 1.1E-65 T 18-10-2018 IPR001633 EAL domain CH53_97 b918173e69bddb07e514aff5f8f7567a 512 SMART SM00052 252 496 1.2E-95 T 18-10-2018 IPR001633 EAL domain CH53_576 bae957795bb2bdb95bd6b9a50b3f2beb 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 7.9E-34 T 18-10-2018 IPR002220 DapA-like GO:0016829 CH53_576 bae957795bb2bdb95bd6b9a50b3f2beb 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 7.9E-34 T 18-10-2018 IPR002220 DapA-like GO:0016829 CH53_576 bae957795bb2bdb95bd6b9a50b3f2beb 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 7.9E-34 T 18-10-2018 IPR002220 DapA-like GO:0016829 CH53_576 bae957795bb2bdb95bd6b9a50b3f2beb 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 7.9E-34 T 18-10-2018 IPR002220 DapA-like GO:0016829 CH53_576 bae957795bb2bdb95bd6b9a50b3f2beb 293 Gene3D G3DSA:3.20.20.70 1 293 1.2E-111 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_576 bae957795bb2bdb95bd6b9a50b3f2beb 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 289 6.2E-115 T 18-10-2018 IPR002220 DapA-like GO:0016829 CH53_576 bae957795bb2bdb95bd6b9a50b3f2beb 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 18-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CH53_576 bae957795bb2bdb95bd6b9a50b3f2beb 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 18-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CH53_576 bae957795bb2bdb95bd6b9a50b3f2beb 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 289 64.923 T 18-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CH53_576 bae957795bb2bdb95bd6b9a50b3f2beb 293 SMART SM01130 1 291 4.2E-143 T 18-10-2018 IPR002220 DapA-like GO:0016829 CH53_576 bae957795bb2bdb95bd6b9a50b3f2beb 293 SUPERFAMILY SSF51569 2 291 2.09E-97 T 18-10-2018 CH53_576 bae957795bb2bdb95bd6b9a50b3f2beb 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 289 1.2E-119 T 18-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CH53_576 bae957795bb2bdb95bd6b9a50b3f2beb 293 PIRSF PIRSF001365 1 293 3.0E-93 T 18-10-2018 IPR002220 DapA-like GO:0016829 CH53_1596 edb2da8f4db07fd10ec24c98fc21c868 277 SUPERFAMILY SSF53697 117 270 5.46E-27 T 18-10-2018 CH53_1596 edb2da8f4db07fd10ec24c98fc21c868 277 SUPERFAMILY SSF46689 11 85 2.69E-19 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1596 edb2da8f4db07fd10ec24c98fc21c868 277 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 80 7.1E-13 T 18-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CH53_1596 edb2da8f4db07fd10ec24c98fc21c868 277 Gene3D G3DSA:3.40.50.10490 111 277 1.7E-36 T 18-10-2018 CH53_1596 edb2da8f4db07fd10ec24c98fc21c868 277 Pfam PF01380 SIS domain 142 268 4.4E-24 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_1596 edb2da8f4db07fd10ec24c98fc21c868 277 Gene3D G3DSA:1.10.10.10 6 83 5.0E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_988 d71287c5d4790a09cff4c99bf96ccba7 295 SUPERFAMILY SSF103481 45 139 1.02E-7 T 18-10-2018 CH53_988 d71287c5d4790a09cff4c99bf96ccba7 295 SUPERFAMILY SSF103481 189 289 1.7E-12 T 18-10-2018 CH53_988 d71287c5d4790a09cff4c99bf96ccba7 295 Pfam PF00892 EamA-like transporter family 157 284 2.3E-13 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_2232 df30ee6afd6f9dec779222febe4d6800 315 Gene3D G3DSA:3.40.50.2300 68 302 1.2E-67 T 18-10-2018 CH53_2232 df30ee6afd6f9dec779222febe4d6800 315 SUPERFAMILY SSF47413 3 60 4.13E-16 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_2232 df30ee6afd6f9dec779222febe4d6800 315 Gene3D G3DSA:1.10.260.40 1 61 3.1E-20 T 18-10-2018 CH53_2232 df30ee6afd6f9dec779222febe4d6800 315 Gene3D G3DSA:3.40.50.2300 163 279 1.2E-67 T 18-10-2018 CH53_2232 df30ee6afd6f9dec779222febe4d6800 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.2E-6 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_2232 df30ee6afd6f9dec779222febe4d6800 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.2E-6 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_2232 df30ee6afd6f9dec779222febe4d6800 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 313 3.7E-155 T 18-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 CH53_2232 df30ee6afd6f9dec779222febe4d6800 315 Pfam PF13377 Periplasmic binding protein-like domain 168 304 9.3E-15 T 18-10-2018 CH53_2232 df30ee6afd6f9dec779222febe4d6800 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 9.3E-20 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_2232 df30ee6afd6f9dec779222febe4d6800 315 SUPERFAMILY SSF53822 63 314 3.34E-62 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_2232 df30ee6afd6f9dec779222febe4d6800 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 18-10-2018 CH53_2232 df30ee6afd6f9dec779222febe4d6800 315 SMART SM00354 4 74 8.5E-32 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_3974 2334c7052c17164481ab5f45fa81a34d 249 Gene3D G3DSA:3.40.50.720 1 235 1.3E-67 T 18-10-2018 CH53_3974 2334c7052c17164481ab5f45fa81a34d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 4.3E-20 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3974 2334c7052c17164481ab5f45fa81a34d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 4.3E-20 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3974 2334c7052c17164481ab5f45fa81a34d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 4.3E-20 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3974 2334c7052c17164481ab5f45fa81a34d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 4.3E-20 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3974 2334c7052c17164481ab5f45fa81a34d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 4.3E-20 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3974 2334c7052c17164481ab5f45fa81a34d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 4.3E-20 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3974 2334c7052c17164481ab5f45fa81a34d 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.7E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3974 2334c7052c17164481ab5f45fa81a34d 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.7E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3974 2334c7052c17164481ab5f45fa81a34d 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.7E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3974 2334c7052c17164481ab5f45fa81a34d 249 SUPERFAMILY SSF51735 2 224 5.49E-63 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3974 2334c7052c17164481ab5f45fa81a34d 249 Pfam PF00106 short chain dehydrogenase 2 187 1.4E-54 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3974 2334c7052c17164481ab5f45fa81a34d 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CH53_757 4353f27a0a3cbc063cbbb7a1fc794b7e 334 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 31 311 6.9E-52 T 18-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 CH53_757 4353f27a0a3cbc063cbbb7a1fc794b7e 334 Gene3D G3DSA:3.40.190.10 25 324 1.1E-138 T 18-10-2018 CH53_757 4353f27a0a3cbc063cbbb7a1fc794b7e 334 SUPERFAMILY SSF53850 24 325 3.91E-93 T 18-10-2018 CH53_757 4353f27a0a3cbc063cbbb7a1fc794b7e 334 Gene3D G3DSA:3.40.190.100 113 252 1.1E-138 T 18-10-2018 CH53_2870 48909599bf369c617419486975656840 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 8.5E-55 T 18-10-2018 IPR000150 Cof family GO:0016787 CH53_2870 48909599bf369c617419486975656840 273 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 273 64.119 T 18-10-2018 IPR023938 HMP-PP phosphatase GO:0016818 CH53_2870 48909599bf369c617419486975656840 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 18-10-2018 CH53_2870 48909599bf369c617419486975656840 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 18-10-2018 CH53_2870 48909599bf369c617419486975656840 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 2.2E-52 T 18-10-2018 CH53_2870 48909599bf369c617419486975656840 273 Gene3D G3DSA:3.40.50.1000 6 254 7.9E-55 T 18-10-2018 IPR023214 HAD superfamily CH53_2870 48909599bf369c617419486975656840 273 SUPERFAMILY SSF56784 1 262 1.61E-60 T 18-10-2018 IPR036412 HAD-like superfamily CH53_2870 48909599bf369c617419486975656840 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 6.1E-34 T 18-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CH53_2870 48909599bf369c617419486975656840 273 Gene3D G3DSA:3.30.1240.10 82 184 7.9E-55 T 18-10-2018 CH53_3364 433f406b4aa6309501958be6d76d6538 608 Gene3D G3DSA:3.90.470.30 77 370 4.2E-267 T 18-10-2018 CH53_3364 433f406b4aa6309501958be6d76d6538 608 SUPERFAMILY SSF82317 93 254 1.83E-67 T 18-10-2018 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain superfamily CH53_3364 433f406b4aa6309501958be6d76d6538 608 Gene3D G3DSA:3.30.420.40 405 582 4.2E-267 T 18-10-2018 CH53_3364 433f406b4aa6309501958be6d76d6538 608 TIGRFAM TIGR04491 reactive_PduG: diol dehydratase reactivase alpha subunit 3 601 6.2E-290 T 18-10-2018 IPR009191 Diol dehydratase-reactivating factor alpha subunit CH53_3364 433f406b4aa6309501958be6d76d6538 608 Gene3D G3DSA:3.50.30.70 97 247 4.2E-267 T 18-10-2018 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain superfamily CH53_3364 433f406b4aa6309501958be6d76d6538 608 Pfam PF08841 Diol dehydratase reactivase ATPase-like domain 275 602 1.4E-161 T 18-10-2018 IPR030994 Diol dehydratase reactivase ATPase-like domain CH53_3364 433f406b4aa6309501958be6d76d6538 608 PIRSF PIRSF011502 1 608 0.0 T 18-10-2018 IPR009191 Diol dehydratase-reactivating factor alpha subunit CH53_3364 433f406b4aa6309501958be6d76d6538 608 SUPERFAMILY SSF53067 2 403 2.85E-69 T 18-10-2018 CH53_3364 433f406b4aa6309501958be6d76d6538 608 Gene3D G3DSA:3.30.420.40 3 600 4.2E-267 T 18-10-2018 CH53_3364 433f406b4aa6309501958be6d76d6538 608 SUPERFAMILY SSF53067 406 600 9.61E-33 T 18-10-2018 CH53_3364 433f406b4aa6309501958be6d76d6538 608 Gene3D G3DSA:2.40.50.140 466 510 4.2E-267 T 18-10-2018 CH53_1956 2dfb5c2afb1359e8d1d626b1f9ddc752 293 Gene3D G3DSA:3.40.190.10 90 290 7.9E-31 T 18-10-2018 CH53_1956 2dfb5c2afb1359e8d1d626b1f9ddc752 293 SUPERFAMILY SSF46785 1 111 9.66E-23 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1956 2dfb5c2afb1359e8d1d626b1f9ddc752 293 Gene3D G3DSA:1.10.10.10 1 83 7.5E-24 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1956 2dfb5c2afb1359e8d1d626b1f9ddc752 293 Pfam PF03466 LysR substrate binding domain 89 293 5.7E-40 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_1956 2dfb5c2afb1359e8d1d626b1f9ddc752 293 Gene3D G3DSA:3.40.190.10 165 269 7.9E-31 T 18-10-2018 CH53_1956 2dfb5c2afb1359e8d1d626b1f9ddc752 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.7E-20 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1956 2dfb5c2afb1359e8d1d626b1f9ddc752 293 SUPERFAMILY SSF53850 89 293 9.23E-35 T 18-10-2018 CH53_209 2c2033d2261a71373ceac41877e4b754 562 SUPERFAMILY SSF116726 291 374 3.79E-11 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_209 2c2033d2261a71373ceac41877e4b754 562 Gene3D G3DSA:3.30.70.1450 299 373 9.4E-7 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_209 2c2033d2261a71373ceac41877e4b754 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 1.3E-39 T 18-10-2018 IPR006512 YidE/YbjL duplication CH53_209 2c2033d2261a71373ceac41877e4b754 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 390 541 8.8E-47 T 18-10-2018 IPR006512 YidE/YbjL duplication CH53_209 2c2033d2261a71373ceac41877e4b754 562 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 59.038 T 18-10-2018 IPR023017 Transport protein YbjL, putative CH53_209 2c2033d2261a71373ceac41877e4b754 562 Pfam PF02080 TrkA-C domain 306 372 2.1E-9 T 18-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CH53_209 2c2033d2261a71373ceac41877e4b754 562 Pfam PF02080 TrkA-C domain 227 278 5.8E-9 T 18-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CH53_209 2c2033d2261a71373ceac41877e4b754 562 SUPERFAMILY SSF116726 227 282 1.7E-10 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_209 2c2033d2261a71373ceac41877e4b754 562 Gene3D G3DSA:3.30.70.1450 223 285 2.0E-9 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_209 2c2033d2261a71373ceac41877e4b754 562 Pfam PF06826 Predicted Permease Membrane Region 385 554 1.1E-41 T 18-10-2018 IPR006512 YidE/YbjL duplication CH53_209 2c2033d2261a71373ceac41877e4b754 562 Pfam PF06826 Predicted Permease Membrane Region 17 182 3.5E-40 T 18-10-2018 IPR006512 YidE/YbjL duplication CH53_3033 a9a8382a19240768a4fbe73b0b26754f 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 8 445 1.0E-168 T 18-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CH53_3033 a9a8382a19240768a4fbe73b0b26754f 445 Pfam PF02447 GntP family permease 8 444 4.4E-157 T 18-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CH53_3033 a9a8382a19240768a4fbe73b0b26754f 445 PIRSF PIRSF002746 4 445 1.9E-143 T 18-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CH53_1239 8f3218bf14f2550830586938d560de30 965 PRINTS PR00986 Valyl-tRNA synthetase signature 514 532 2.1E-35 T 18-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CH53_1239 8f3218bf14f2550830586938d560de30 965 PRINTS PR00986 Valyl-tRNA synthetase signature 483 504 2.1E-35 T 18-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CH53_1239 8f3218bf14f2550830586938d560de30 965 PRINTS PR00986 Valyl-tRNA synthetase signature 383 396 2.1E-35 T 18-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CH53_1239 8f3218bf14f2550830586938d560de30 965 PRINTS PR00986 Valyl-tRNA synthetase signature 250 267 2.1E-35 T 18-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CH53_1239 8f3218bf14f2550830586938d560de30 965 PRINTS PR00986 Valyl-tRNA synthetase signature 49 60 2.1E-35 T 18-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CH53_1239 8f3218bf14f2550830586938d560de30 965 Gene3D G3DSA:1.10.730.10 592 831 2.2E-72 T 18-10-2018 CH53_1239 8f3218bf14f2550830586938d560de30 965 SUPERFAMILY SSF52374 14 655 6.26E-137 T 18-10-2018 CH53_1239 8f3218bf14f2550830586938d560de30 965 Gene3D G3DSA:3.40.50.620 383 567 1.7E-42 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_1239 8f3218bf14f2550830586938d560de30 965 Gene3D G3DSA:3.90.740.10 211 375 5.4E-49 T 18-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CH53_1239 8f3218bf14f2550830586938d560de30 965 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 56 67 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_1239 8f3218bf14f2550830586938d560de30 965 Gene3D G3DSA:3.40.50.620 16 210 3.4E-64 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_1239 8f3218bf14f2550830586938d560de30 965 TIGRFAM TIGR00422 valS: valine--tRNA ligase 16 944 0.0 T 18-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CH53_1239 8f3218bf14f2550830586938d560de30 965 Hamap MF_02004 Valine--tRNA ligase [valS]. 15 963 16.19 T 18-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CH53_1239 8f3218bf14f2550830586938d560de30 965 Pfam PF08264 Anticodon-binding domain of tRNA 688 839 3.9E-44 T 18-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CH53_1239 8f3218bf14f2550830586938d560de30 965 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 900 958 3.6E-16 T 18-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CH53_1239 8f3218bf14f2550830586938d560de30 965 SUPERFAMILY SSF47323 656 913 1.16E-72 T 18-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_1239 8f3218bf14f2550830586938d560de30 965 Gene3D G3DSA:1.10.287.380 891 962 1.3E-18 T 18-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CH53_1239 8f3218bf14f2550830586938d560de30 965 SUPERFAMILY SSF46589 898 961 6.8E-16 T 18-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CH53_1239 8f3218bf14f2550830586938d560de30 965 SUPERFAMILY SSF50677 205 379 5.76E-57 T 18-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CH53_1239 8f3218bf14f2550830586938d560de30 965 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 1.3E-230 T 18-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3527 842fed02441bbce21afa8c8daf93d0d2 579 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 318 340 - T 18-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CH53_3527 842fed02441bbce21afa8c8daf93d0d2 579 Gene3D G3DSA:1.20.120.30 49 216 6.2E-5 T 18-10-2018 CH53_3527 842fed02441bbce21afa8c8daf93d0d2 579 SMART SM00283 293 540 1.3E-89 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_3527 842fed02441bbce21afa8c8daf93d0d2 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 468 497 1.9E-60 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3527 842fed02441bbce21afa8c8daf93d0d2 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 30 55 1.9E-60 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3527 842fed02441bbce21afa8c8daf93d0d2 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 343 1.9E-60 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3527 842fed02441bbce21afa8c8daf93d0d2 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 418 1.9E-60 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3527 842fed02441bbce21afa8c8daf93d0d2 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 1.9E-60 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3527 842fed02441bbce21afa8c8daf93d0d2 579 Pfam PF02203 Tar ligand binding domain homologue 27 192 6.0E-28 T 18-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CH53_3527 842fed02441bbce21afa8c8daf93d0d2 579 SUPERFAMILY SSF47170 56 190 1.96E-13 T 18-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CH53_3527 842fed02441bbce21afa8c8daf93d0d2 579 SMART SM00304 240 292 4.9E-7 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_3527 842fed02441bbce21afa8c8daf93d0d2 579 Gene3D G3DSA:1.10.287.950 240 542 5.7E-91 T 18-10-2018 CH53_3527 842fed02441bbce21afa8c8daf93d0d2 579 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 351 508 6.7E-54 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_3527 842fed02441bbce21afa8c8daf93d0d2 579 SUPERFAMILY SSF58104 260 541 1.57E-71 T 18-10-2018 CH53_3527 842fed02441bbce21afa8c8daf93d0d2 579 Pfam PF00672 HAMP domain 242 287 2.3E-8 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_708 6235b04c742b3959828a832cb65a3862 88 SUPERFAMILY SSF47413 2 70 2.2E-11 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_708 6235b04c742b3959828a832cb65a3862 88 Gene3D G3DSA:1.10.260.40 1 88 1.4E-19 T 18-10-2018 CH53_708 6235b04c742b3959828a832cb65a3862 88 SMART SM00530 5 64 5.7E-8 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_708 6235b04c742b3959828a832cb65a3862 88 Pfam PF13560 Helix-turn-helix domain 5 61 1.5E-7 T 18-10-2018 CH53_3058 65f395b1574250c42d1654b1658525b4 321 Pfam PF04055 Radical SAM superfamily 91 251 9.7E-16 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_3058 65f395b1574250c42d1654b1658525b4 321 SMART SM00729 84 293 3.1E-16 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CH53_3058 65f395b1574250c42d1654b1658525b4 321 SUPERFAMILY SSF102114 53 316 8.37E-68 T 18-10-2018 CH53_3058 65f395b1574250c42d1654b1658525b4 321 PIRSF PIRSF005963 2 320 1.4E-130 T 18-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CH53_3058 65f395b1574250c42d1654b1658525b4 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.919 T 18-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CH53_3058 65f395b1574250c42d1654b1658525b4 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 2.8E-159 T 18-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CH53_3058 65f395b1574250c42d1654b1658525b4 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 27 73 7.0E-7 T 18-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CH53_3058 65f395b1574250c42d1654b1658525b4 321 Gene3D G3DSA:3.20.20.70 82 294 5.9E-21 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3063 2e96f7104c0bc1261f30f660ab282cb9 370 Pfam PF01098 Cell cycle protein 21 364 2.7E-122 T 18-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_3063 2e96f7104c0bc1261f30f660ab282cb9 370 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 11 366 29.216 T 18-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_3063 2e96f7104c0bc1261f30f660ab282cb9 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 1.0E-136 T 18-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_3063 2e96f7104c0bc1261f30f660ab282cb9 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 18-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_2609 2b3c1987a81ad253baff6d6f2433c54f 205 Pfam PF01810 LysE type translocator 14 200 3.0E-48 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CH53_2609 2b3c1987a81ad253baff6d6f2433c54f 205 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 38.006 T 18-10-2018 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 CH53_2609 2b3c1987a81ad253baff6d6f2433c54f 205 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 1.6E-65 T 18-10-2018 IPR004777 L-lysine exporter/arginine exporter GO:0016021 CH53_3563 3cf9b6b36fc8745436b88af2e057fcd5 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.5E-23 T 18-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CH53_3563 3cf9b6b36fc8745436b88af2e057fcd5 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.5E-23 T 18-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CH53_3563 3cf9b6b36fc8745436b88af2e057fcd5 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.5E-23 T 18-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CH53_3563 3cf9b6b36fc8745436b88af2e057fcd5 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 5.7E-33 T 18-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 CH53_3563 3cf9b6b36fc8745436b88af2e057fcd5 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.6E-29 T 18-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CH53_3563 3cf9b6b36fc8745436b88af2e057fcd5 89 PIRSF PIRSF004669 1 89 5.0E-32 T 18-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CH53_2049 823899ec9bc55dd2100902a22ecf9575 318 Pfam PF03547 Membrane transport protein 169 310 7.0E-16 T 18-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CH53_2049 823899ec9bc55dd2100902a22ecf9575 318 Pfam PF03547 Membrane transport protein 17 154 6.0E-11 T 18-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CH53_2104 8415155a2b1fe73166f1c55e374fc94e 259 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 2.8E-9 T 18-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CH53_2104 8415155a2b1fe73166f1c55e374fc94e 259 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 44.423 T 18-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CH53_2104 8415155a2b1fe73166f1c55e374fc94e 259 Gene3D G3DSA:3.90.79.10 126 256 4.7E-38 T 18-10-2018 CH53_2104 8415155a2b1fe73166f1c55e374fc94e 259 Pfam PF00293 NUDIX domain 131 234 2.2E-15 T 18-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CH53_2104 8415155a2b1fe73166f1c55e374fc94e 259 SUPERFAMILY SSF55811 79 241 2.44E-39 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CH53_2104 8415155a2b1fe73166f1c55e374fc94e 259 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 18-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CH53_2104 8415155a2b1fe73166f1c55e374fc94e 259 Gene3D G3DSA:3.90.79.20 2 125 5.3E-47 T 18-10-2018 CH53_2104 8415155a2b1fe73166f1c55e374fc94e 259 SUPERFAMILY SSF55811 2 96 4.36E-31 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CH53_3274 6da9ffe915f257964378a380b5de978e 719 SUPERFAMILY SSF46689 601 707 3.0E-5 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3274 6da9ffe915f257964378a380b5de978e 719 SUPERFAMILY SSF55781 189 365 1.85E-21 T 18-10-2018 CH53_3274 6da9ffe915f257964378a380b5de978e 719 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 412 425 - T 18-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH53_3274 6da9ffe915f257964378a380b5de978e 719 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 474 489 - T 18-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH53_3274 6da9ffe915f257964378a380b5de978e 719 Pfam PF01590 GAF domain 209 352 1.8E-9 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_3274 6da9ffe915f257964378a380b5de978e 719 SUPERFAMILY SSF55781 15 173 6.98E-13 T 18-10-2018 CH53_3274 6da9ffe915f257964378a380b5de978e 719 SUPERFAMILY SSF52540 387 624 1.39E-71 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3274 6da9ffe915f257964378a380b5de978e 719 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 601 610 - T 18-10-2018 IPR025944 Sigma-54 interaction domain, conserved site CH53_3274 6da9ffe915f257964378a380b5de978e 719 Gene3D G3DSA:3.30.450.40 194 363 1.0E-23 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_3274 6da9ffe915f257964378a380b5de978e 719 Gene3D G3DSA:1.10.8.60 559 625 5.3E-24 T 18-10-2018 CH53_3274 6da9ffe915f257964378a380b5de978e 719 Gene3D G3DSA:3.30.450.40 14 185 2.9E-11 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_3274 6da9ffe915f257964378a380b5de978e 719 Gene3D G3DSA:3.40.50.300 376 558 9.3E-64 T 18-10-2018 CH53_3274 6da9ffe915f257964378a380b5de978e 719 Gene3D G3DSA:1.10.10.60 647 711 8.5E-8 T 18-10-2018 CH53_3274 6da9ffe915f257964378a380b5de978e 719 Pfam PF00158 Sigma-54 interaction domain 388 554 6.2E-70 T 18-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CH53_3274 6da9ffe915f257964378a380b5de978e 719 SMART SM00382 408 552 8.9E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3274 6da9ffe915f257964378a380b5de978e 719 SMART SM00065 32 180 0.012 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_3274 6da9ffe915f257964378a380b5de978e 719 SMART SM00065 208 362 1.2E-15 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_4264 51e29e0c400d097bf036d9b49eea522d 306 SUPERFAMILY SSF161098 30 306 1.31E-69 T 18-10-2018 IPR035906 MetI-like superfamily CH53_4264 51e29e0c400d097bf036d9b49eea522d 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 300 2.7E-17 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_4264 51e29e0c400d097bf036d9b49eea522d 306 Gene3D G3DSA:1.10.3720.10 23 297 5.6E-63 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1029 3d0a575b9dcd668246ea1cdfa4bb0924 334 SUPERFAMILY SSF47413 2 58 2.31E-15 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_1029 3d0a575b9dcd668246ea1cdfa4bb0924 334 SUPERFAMILY SSF53822 60 314 4.32E-40 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_1029 3d0a575b9dcd668246ea1cdfa4bb0924 334 Gene3D G3DSA:1.10.260.40 1 61 3.1E-28 T 18-10-2018 CH53_1029 3d0a575b9dcd668246ea1cdfa4bb0924 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 1.3E-18 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_1029 3d0a575b9dcd668246ea1cdfa4bb0924 334 Gene3D G3DSA:3.40.50.2300 62 154 4.7E-25 T 18-10-2018 CH53_1029 3d0a575b9dcd668246ea1cdfa4bb0924 334 SMART SM00354 1 73 2.9E-31 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_1029 3d0a575b9dcd668246ea1cdfa4bb0924 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 3.4E-149 T 18-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 CH53_1029 3d0a575b9dcd668246ea1cdfa4bb0924 334 Gene3D G3DSA:3.40.50.2300 155 334 3.5E-28 T 18-10-2018 CH53_1029 3d0a575b9dcd668246ea1cdfa4bb0924 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 304 1.2E-13 T 18-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH53_1684 d23e8dc68c3bae8defc450306710c860 653 SMART SM00304 310 362 5.4E-6 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_1684 d23e8dc68c3bae8defc450306710c860 653 SMART SM00283 363 610 5.6E-91 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_1684 d23e8dc68c3bae8defc450306710c860 653 Pfam PF00672 HAMP domain 310 358 5.2E-7 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_1684 d23e8dc68c3bae8defc450306710c860 653 SUPERFAMILY SSF58104 330 612 6.15E-75 T 18-10-2018 CH53_1684 d23e8dc68c3bae8defc450306710c860 653 Pfam PF16591 Helical bimodular sensor domain 57 284 4.4E-17 T 18-10-2018 IPR032255 Helical bimodular sensor domain CH53_1684 d23e8dc68c3bae8defc450306710c860 653 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 422 577 1.6E-56 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_1684 d23e8dc68c3bae8defc450306710c860 653 Gene3D G3DSA:1.20.1440.210 135 245 5.0E-11 T 18-10-2018 CH53_1684 d23e8dc68c3bae8defc450306710c860 653 Gene3D G3DSA:1.10.287.950 309 612 1.2E-93 T 18-10-2018 CH53_1684 d23e8dc68c3bae8defc450306710c860 653 Gene3D G3DSA:1.20.1440.210 57 272 5.0E-11 T 18-10-2018 CH53_1684 d23e8dc68c3bae8defc450306710c860 653 SMART SM01358 39 288 5.7E-51 T 18-10-2018 IPR032255 Helical bimodular sensor domain CH53_1684 d23e8dc68c3bae8defc450306710c860 653 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 413 7.9E-59 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_1684 d23e8dc68c3bae8defc450306710c860 653 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 461 488 7.9E-59 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_1684 d23e8dc68c3bae8defc450306710c860 653 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 490 519 7.9E-59 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_1684 d23e8dc68c3bae8defc450306710c860 653 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 538 567 7.9E-59 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_373 a7a203101dd93c57048df3ba9cdc1794 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 20.017 T 18-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CH53_373 a7a203101dd93c57048df3ba9cdc1794 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 5.1E-22 T 18-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CH53_574 3c9b764440c2e0056cc8626d6f69f792 237 Pfam PF01259 SAICAR synthetase 7 231 5.8E-58 T 18-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CH53_574 3c9b764440c2e0056cc8626d6f69f792 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 18-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CH53_574 3c9b764440c2e0056cc8626d6f69f792 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 8.7E-78 T 18-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CH53_574 3c9b764440c2e0056cc8626d6f69f792 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.519 T 18-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CH53_574 3c9b764440c2e0056cc8626d6f69f792 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 18-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CH53_574 3c9b764440c2e0056cc8626d6f69f792 237 Gene3D G3DSA:3.30.470.20 85 220 4.4E-90 T 18-10-2018 CH53_574 3c9b764440c2e0056cc8626d6f69f792 237 SUPERFAMILY SSF56104 2 232 3.27E-75 T 18-10-2018 CH53_574 3c9b764440c2e0056cc8626d6f69f792 237 Gene3D G3DSA:3.30.200.20 7 231 4.4E-90 T 18-10-2018 CH53_1534 929a8f52023be39462ee1154067e5173 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 6.3E-36 T 18-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CH53_1534 929a8f52023be39462ee1154067e5173 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 107 1.4E-39 T 18-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CH53_1534 929a8f52023be39462ee1154067e5173 108 SUPERFAMILY SSF50022 1 107 5.69E-36 T 18-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CH53_1534 929a8f52023be39462ee1154067e5173 108 Gene3D G3DSA:2.102.10.10 1 108 3.1E-32 T 18-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CH53_3944 f11fbcec522bbe1e4fa1639cd58bf3f0 569 PIRSF PIRSF000538 5 558 3.7E-41 T 18-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_3944 f11fbcec522bbe1e4fa1639cd58bf3f0 569 SUPERFAMILY SSF53067 289 548 1.21E-45 T 18-10-2018 CH53_3944 f11fbcec522bbe1e4fa1639cd58bf3f0 569 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 144 1.5E-6 T 18-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CH53_3944 f11fbcec522bbe1e4fa1639cd58bf3f0 569 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 295 505 1.6E-36 T 18-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CH53_3944 f11fbcec522bbe1e4fa1639cd58bf3f0 569 Hamap MF_00520 Ribulokinase [araB]. 5 562 52.216 T 18-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 CH53_3944 f11fbcec522bbe1e4fa1639cd58bf3f0 569 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 6 552 1.4E-227 T 18-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 CH53_3944 f11fbcec522bbe1e4fa1639cd58bf3f0 569 Gene3D G3DSA:3.30.420.40 9 530 8.2E-122 T 18-10-2018 CH53_3944 f11fbcec522bbe1e4fa1639cd58bf3f0 569 SUPERFAMILY SSF53067 8 288 1.85E-23 T 18-10-2018 CH53_3944 f11fbcec522bbe1e4fa1639cd58bf3f0 569 Gene3D G3DSA:3.30.420.460 340 541 8.2E-122 T 18-10-2018 CH53_2846 6b42a0b407c985062803946a5c959703 483 Gene3D G3DSA:3.40.50.620 176 397 9.6E-53 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_2846 6b42a0b407c985062803946a5c959703 483 SUPERFAMILY SSF52402 175 373 1.65E-41 T 18-10-2018 CH53_2846 6b42a0b407c985062803946a5c959703 483 SUPERFAMILY SSF52821 392 482 2.1E-11 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily CH53_2846 6b42a0b407c985062803946a5c959703 483 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 384 483 7.7E-43 T 18-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 CH53_2846 6b42a0b407c985062803946a5c959703 483 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 483 228.83 T 18-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 CH53_2846 6b42a0b407c985062803946a5c959703 483 Gene3D G3DSA:3.40.250.10 398 483 1.7E-9 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily CH53_2846 6b42a0b407c985062803946a5c959703 483 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 176 370 3.0E-79 T 18-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 CH53_2846 6b42a0b407c985062803946a5c959703 483 Pfam PF02926 THUMP domain 63 162 2.6E-23 T 18-10-2018 IPR004114 THUMP domain GO:0003723 CH53_2846 6b42a0b407c985062803946a5c959703 483 Gene3D G3DSA:3.30.2130.30 1 175 1.1E-34 T 18-10-2018 CH53_2846 6b42a0b407c985062803946a5c959703 483 SMART SM00981 76 166 1.7E-22 T 18-10-2018 IPR004114 THUMP domain GO:0003723 CH53_2846 6b42a0b407c985062803946a5c959703 483 SUPERFAMILY SSF143437 1 174 4.53E-47 T 18-10-2018 CH53_2846 6b42a0b407c985062803946a5c959703 483 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 374 1.1E-129 T 18-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 CH53_731 a3146419f9bca7692336c5cdbe6c0346 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 2.9E-43 T 18-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_731 a3146419f9bca7692336c5cdbe6c0346 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 1.0E-46 T 18-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_731 a3146419f9bca7692336c5cdbe6c0346 100 SUPERFAMILY SSF54111 1 99 7.19E-41 T 18-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_731 a3146419f9bca7692336c5cdbe6c0346 100 Gene3D G3DSA:3.30.280.10 1 100 3.8E-43 T 18-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_731 a3146419f9bca7692336c5cdbe6c0346 100 Pfam PF00547 Urease, gamma subunit 1 99 2.6E-42 T 18-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_731 a3146419f9bca7692336c5cdbe6c0346 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 32.942 T 18-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_731 a3146419f9bca7692336c5cdbe6c0346 100 PIRSF PIRSF001223 1 100 3.9E-48 T 18-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CH53_2391 80a01c22ac10f0adddee171750aaa4d6 513 Gene3D G3DSA:2.40.30.170 228 325 3.5E-23 T 18-10-2018 CH53_2391 80a01c22ac10f0adddee171750aaa4d6 513 SUPERFAMILY SSF111369 131 322 3.27E-13 T 18-10-2018 CH53_2391 80a01c22ac10f0adddee171750aaa4d6 513 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 206 394 4.7E-36 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CH53_2391 80a01c22ac10f0adddee171750aaa4d6 513 Gene3D G3DSA:2.40.50.320 429 508 1.0E-19 T 18-10-2018 CH53_2391 80a01c22ac10f0adddee171750aaa4d6 513 Pfam PF11604 Copper binding periplasmic protein CusF 435 499 3.4E-17 T 18-10-2018 IPR021647 Copper binding periplasmic protein CusF CH53_2391 80a01c22ac10f0adddee171750aaa4d6 513 Gene3D G3DSA:2.40.420.20 326 418 2.2E-24 T 18-10-2018 CH53_2391 80a01c22ac10f0adddee171750aaa4d6 513 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 112 318 4.7E-64 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH53_1028 96f243f17f1b4dedfb8d228d5fd0773f 146 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 9 142 1.0E-63 T 18-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 CH53_1028 96f243f17f1b4dedfb8d228d5fd0773f 146 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 1 145 35.066 T 18-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 CH53_1028 96f243f17f1b4dedfb8d228d5fd0773f 146 Pfam PF06610 L-alanine exporter 5 142 3.0E-71 T 18-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 CH53_4086 5f7825c5aa1dc781d9ca6861c8905678 256 Gene3D G3DSA:2.40.30.170 12 219 3.6E-36 T 18-10-2018 CH53_4086 5f7825c5aa1dc781d9ca6861c8905678 256 Pfam PF13437 HlyD family secretion protein 125 204 1.2E-7 T 18-10-2018 CH53_4086 5f7825c5aa1dc781d9ca6861c8905678 256 Gene3D G3DSA:2.40.50.100 14 159 3.6E-36 T 18-10-2018 CH53_4086 5f7825c5aa1dc781d9ca6861c8905678 256 Pfam PF13533 Biotin-lipoyl like 16 62 6.0E-16 T 18-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CH53_4086 5f7825c5aa1dc781d9ca6861c8905678 256 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 15 200 6.1E-35 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CH53_4086 5f7825c5aa1dc781d9ca6861c8905678 256 SUPERFAMILY SSF111369 14 187 2.88E-25 T 18-10-2018 CH53_4086 5f7825c5aa1dc781d9ca6861c8905678 256 Gene3D G3DSA:1.10.287.470 48 124 3.6E-36 T 18-10-2018 CH53_1568 048ac52e8efa0be61e28ff23eabc975c 698 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 103 690 1.0E-242 T 18-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CH53_1568 048ac52e8efa0be61e28ff23eabc975c 698 Pfam PF02446 4-alpha-glucanotransferase 151 669 4.1E-131 T 18-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CH53_1568 048ac52e8efa0be61e28ff23eabc975c 698 SUPERFAMILY SSF51445 131 691 2.8E-149 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_1568 048ac52e8efa0be61e28ff23eabc975c 698 Gene3D G3DSA:3.20.20.80 144 688 6.7E-123 T 18-10-2018 CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 Gene3D G3DSA:2.40.50.100 62 95 1.2E-5 T 18-10-2018 CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 24 443 3.4E-116 T 18-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 Gene3D G3DSA:2.40.30.170 328 422 5.8E-7 T 18-10-2018 CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 340 364 3.3E-64 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 74 94 3.3E-64 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 328 3.3E-64 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 387 3.3E-64 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 32 55 3.3E-64 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 407 422 3.3E-64 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 422 442 3.3E-64 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 Pfam PF00529 HlyD membrane-fusion protein of T1SS 34 401 2.9E-20 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 376 1.1E-7 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 Gene3D G3DSA:2.40.50.100 292 327 5.8E-7 T 18-10-2018 CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 Gene3D G3DSA:1.10.287.470 96 189 1.2E-5 T 18-10-2018 CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 Gene3D G3DSA:1.10.287.470 239 291 5.8E-7 T 18-10-2018 CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 Gene3D G3DSA:2.40.30.170 51 61 1.2E-5 T 18-10-2018 CH53_3005 aa30f950592a5cc04c54e75991e53c17 443 ProSitePatterns PS00543 HlyD family secretion proteins signature. 407 429 - T 18-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 CH53_3191 1c0d65e13f9dcebc3e70de89ea282931 305 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 260 3.6E-92 T 18-10-2018 IPR010119 Gluconeogenesis factor CH53_3191 1c0d65e13f9dcebc3e70de89ea282931 305 Gene3D G3DSA:3.40.50.12300 9 301 6.0E-74 T 18-10-2018 IPR038136 Gluconeogenesis factor superfamily CH53_3191 1c0d65e13f9dcebc3e70de89ea282931 305 Hamap MF_00973 Gluconeogenesis factor. 8 300 31.402 T 18-10-2018 IPR010119 Gluconeogenesis factor CH53_3191 1c0d65e13f9dcebc3e70de89ea282931 305 SUPERFAMILY SSF142338 11 294 2.35E-78 T 18-10-2018 CH53_3191 1c0d65e13f9dcebc3e70de89ea282931 305 Pfam PF01933 Uncharacterised protein family UPF0052 12 296 3.1E-71 T 18-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CH53_3171 5b003926fae38b322711d6fd989aaf07 383 PRINTS PR00959 Mevalonate kinase family signature 25 49 4.0E-46 T 18-10-2018 CH53_3171 5b003926fae38b322711d6fd989aaf07 383 PRINTS PR00959 Mevalonate kinase family signature 328 345 4.0E-46 T 18-10-2018 CH53_3171 5b003926fae38b322711d6fd989aaf07 383 PRINTS PR00959 Mevalonate kinase family signature 119 141 4.0E-46 T 18-10-2018 CH53_3171 5b003926fae38b322711d6fd989aaf07 383 PRINTS PR00959 Mevalonate kinase family signature 162 181 4.0E-46 T 18-10-2018 CH53_3171 5b003926fae38b322711d6fd989aaf07 383 PIRSF PIRSF000530 1 383 2.3E-119 T 18-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CH53_3171 5b003926fae38b322711d6fd989aaf07 383 Pfam PF08544 GHMP kinases C terminal 279 361 4.9E-10 T 18-10-2018 IPR013750 GHMP kinase, C-terminal domain CH53_3171 5b003926fae38b322711d6fd989aaf07 383 SUPERFAMILY SSF54211 3 203 4.63E-64 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_3171 5b003926fae38b322711d6fd989aaf07 383 SUPERFAMILY SSF55060 205 381 3.84E-53 T 18-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CH53_3171 5b003926fae38b322711d6fd989aaf07 383 PRINTS PR00473 Galactokinase signature 263 277 9.6E-30 T 18-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CH53_3171 5b003926fae38b322711d6fd989aaf07 383 PRINTS PR00473 Galactokinase signature 92 103 9.6E-30 T 18-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CH53_3171 5b003926fae38b322711d6fd989aaf07 383 PRINTS PR00473 Galactokinase signature 27 45 9.6E-30 T 18-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CH53_3171 5b003926fae38b322711d6fd989aaf07 383 PRINTS PR00473 Galactokinase signature 112 130 9.6E-30 T 18-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CH53_3171 5b003926fae38b322711d6fd989aaf07 383 Pfam PF00288 GHMP kinases N terminal domain 114 181 3.2E-15 T 18-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CH53_3171 5b003926fae38b322711d6fd989aaf07 383 Gene3D G3DSA:3.30.70.890 206 382 3.9E-60 T 18-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CH53_3171 5b003926fae38b322711d6fd989aaf07 383 Hamap MF_00246 Galactokinase [galK]. 25 382 42.318 T 18-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CH53_3171 5b003926fae38b322711d6fd989aaf07 383 TIGRFAM TIGR00131 gal_kin: galactokinase 5 383 4.2E-154 T 18-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CH53_3171 5b003926fae38b322711d6fd989aaf07 383 Gene3D G3DSA:3.30.230.10 2 205 6.0E-66 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH53_3171 5b003926fae38b322711d6fd989aaf07 383 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 18-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CH53_3171 5b003926fae38b322711d6fd989aaf07 383 Pfam PF10509 Galactokinase galactose-binding signature 11 57 1.7E-22 T 18-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CH53_3171 5b003926fae38b322711d6fd989aaf07 383 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 18-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CH53_3125 d15cd0010bc2adbdbd66f3edc33cca88 562 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 557 5.3E-263 T 18-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CH53_3125 d15cd0010bc2adbdbd66f3edc33cca88 562 Pfam PF03814 Potassium-transporting ATPase A subunit 12 556 8.0E-243 T 18-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CH53_3125 d15cd0010bc2adbdbd66f3edc33cca88 562 PIRSF PIRSF001294 1 560 2.2E-240 T 18-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CH53_3125 d15cd0010bc2adbdbd66f3edc33cca88 562 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 558 35.337 T 18-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CH53_2576 37729f75667e1802470d3aa1b4865d30 90 SUPERFAMILY SSF111148 1 89 5.75E-39 T 18-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 CH53_2576 37729f75667e1802470d3aa1b4865d30 90 PIRSF PIRSF029827 1 90 8.1E-43 T 18-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CH53_2576 37729f75667e1802470d3aa1b4865d30 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 6.1E-39 T 18-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CH53_2576 37729f75667e1802470d3aa1b4865d30 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.289 T 18-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CH53_2576 37729f75667e1802470d3aa1b4865d30 90 Gene3D G3DSA:1.10.3880.10 1 90 1.5E-36 T 18-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 CH53_2576 37729f75667e1802470d3aa1b4865d30 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 3.0E-38 T 18-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 Pfam PF08461 Ribonuclease R winged-helix domain 23 85 1.4E-16 T 18-10-2018 IPR013668 Ribonuclease R winged-helix domain CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 SUPERFAMILY SSF50249 138 236 5.14E-15 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 Pfam PF00773 RNB domain 260 587 9.3E-106 T 18-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 SUPERFAMILY SSF50249 643 732 4.32E-21 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 SMART SM00955 260 588 7.8E-181 T 18-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 SMART SM00316 80 142 49.0 T 18-10-2018 IPR022967 RNA-binding domain, S1 CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 SMART SM00316 643 726 3.3E-13 T 18-10-2018 IPR022967 RNA-binding domain, S1 CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 SMART SM00357 150 214 2.0 T 18-10-2018 IPR011129 Cold shock domain GO:0003676 CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 SMART SM00357 86 145 6.7E-17 T 18-10-2018 IPR011129 Cold shock domain GO:0003676 CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 Pfam PF08206 Ribonuclease B OB domain 87 144 1.3E-21 T 18-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 Pfam PF08206 Ribonuclease B OB domain 158 213 5.2E-5 T 18-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 Gene3D G3DSA:2.40.50.140 148 214 3.3E-5 T 18-10-2018 CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 Gene3D G3DSA:2.40.50.140 73 147 1.9E-16 T 18-10-2018 CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 Pfam PF00575 S1 RNA binding domain 642 724 1.0E-16 T 18-10-2018 IPR003029 S1 domain GO:0003676 CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 Hamap MF_01895 Ribonuclease R [rnr]. 38 726 57.02 T 18-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 SUPERFAMILY SSF50249 67 145 6.86E-18 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 Gene3D G3DSA:2.40.50.140 646 753 1.5E-23 T 18-10-2018 CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 726 4.4E-272 T 18-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 SUPERFAMILY SSF50249 222 642 1.09E-140 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_1331 8e0e592728283d54cf02fee6d7f43fbb 848 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 726 1.2E-276 T 18-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CH53_387 0c4f228853da160333fb9f60395e8b2c 611 SUPERFAMILY SSF116726 322 393 8.11E-18 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_387 0c4f228853da160333fb9f60395e8b2c 611 Gene3D G3DSA:3.30.70.1450 324 397 8.4E-17 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_387 0c4f228853da160333fb9f60395e8b2c 611 Pfam PF02080 TrkA-C domain 327 393 8.2E-13 T 18-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CH53_387 0c4f228853da160333fb9f60395e8b2c 611 Pfam PF02080 TrkA-C domain 232 298 5.1E-15 T 18-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CH53_387 0c4f228853da160333fb9f60395e8b2c 611 Gene3D G3DSA:3.30.70.1450 230 307 1.5E-13 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_387 0c4f228853da160333fb9f60395e8b2c 611 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 559 575 - T 18-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 CH53_387 0c4f228853da160333fb9f60395e8b2c 611 Pfam PF03600 Citrate transporter 16 197 6.4E-37 T 18-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CH53_387 0c4f228853da160333fb9f60395e8b2c 611 SUPERFAMILY SSF116726 231 290 7.59E-10 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_387 0c4f228853da160333fb9f60395e8b2c 611 Pfam PF03600 Citrate transporter 431 608 7.8E-21 T 18-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CH53_2376 984ff5bedb43d3f099b15615787060bd 152 Pfam PF07811 TadE-like protein 14 55 2.1E-7 T 18-10-2018 IPR012495 TadE-like CH53_187 241846e49fad4255f628be1b5ac36a1a 339 SUPERFAMILY SSF53383 3 336 2.2E-110 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_187 241846e49fad4255f628be1b5ac36a1a 339 PIRSF PIRSF017617 1 339 2.7E-129 T 18-10-2018 IPR023603 Threonine aldolase CH53_187 241846e49fad4255f628be1b5ac36a1a 339 Gene3D G3DSA:3.90.1150.10 246 336 3.7E-27 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_187 241846e49fad4255f628be1b5ac36a1a 339 Gene3D G3DSA:3.40.640.10 1 245 1.4E-97 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_187 241846e49fad4255f628be1b5ac36a1a 339 Pfam PF01212 Beta-eliminating lyase 4 284 9.2E-95 T 18-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CH53_942 9feac7232d2636400b5b2ddc2dd6ffd8 135 Gene3D G3DSA:3.30.160.250 1 86 1.9E-21 T 18-10-2018 CH53_942 9feac7232d2636400b5b2ddc2dd6ffd8 135 Gene3D G3DSA:1.10.1220.10 101 135 8.6E-6 T 18-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CH53_942 9feac7232d2636400b5b2ddc2dd6ffd8 135 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 129 2.6E-29 T 18-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system CH53_942 9feac7232d2636400b5b2ddc2dd6ffd8 135 SUPERFAMILY SSF143100 1 61 5.1E-15 T 18-10-2018 IPR035069 TTHA1013/TTHA0281-like CH53_953 7d2a0f93cf9e4bac6bcc6e39b5b0a1c3 443 Gene3D G3DSA:3.40.1350.30 134 270 1.1E-119 T 18-10-2018 CH53_953 7d2a0f93cf9e4bac6bcc6e39b5b0a1c3 443 SUPERFAMILY SSF53335 75 435 1.15E-83 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_953 7d2a0f93cf9e4bac6bcc6e39b5b0a1c3 443 Gene3D G3DSA:3.40.50.150 88 432 1.1E-119 T 18-10-2018 CH53_953 7d2a0f93cf9e4bac6bcc6e39b5b0a1c3 443 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 430 1.1E-137 T 18-10-2018 CH53_953 7d2a0f93cf9e4bac6bcc6e39b5b0a1c3 443 Gene3D G3DSA:2.40.50.140 1 87 1.1E-30 T 18-10-2018 CH53_953 7d2a0f93cf9e4bac6bcc6e39b5b0a1c3 443 Pfam PF01938 TRAM domain 11 66 1.2E-10 T 18-10-2018 IPR002792 TRAM domain CH53_953 7d2a0f93cf9e4bac6bcc6e39b5b0a1c3 443 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 369 399 - T 18-10-2018 IPR030390 RNA methyltransferase TrmA, active site CH53_953 7d2a0f93cf9e4bac6bcc6e39b5b0a1c3 443 SUPERFAMILY SSF50249 2 66 1.88E-13 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_953 7d2a0f93cf9e4bac6bcc6e39b5b0a1c3 443 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 438 62.987 T 18-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CH53_953 7d2a0f93cf9e4bac6bcc6e39b5b0a1c3 443 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 420 430 - T 18-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site CH53_953 7d2a0f93cf9e4bac6bcc6e39b5b0a1c3 443 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 125 435 1.0E-25 T 18-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CH53_1949 a76672df31c9c71954759b5ba0f7545e 507 SUPERFAMILY SSF52540 189 502 4.78E-48 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1949 a76672df31c9c71954759b5ba0f7545e 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.8E-43 T 18-10-2018 CH53_1949 a76672df31c9c71954759b5ba0f7545e 507 Gene3D G3DSA:3.40.50.300 188 498 1.1E-54 T 18-10-2018 CH53_1949 a76672df31c9c71954759b5ba0f7545e 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 390 9.1E-89 T 18-10-2018 IPR000523 Magnesium chelatase ChlI domain CH53_1949 a76672df31c9c71954759b5ba0f7545e 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 3.6E-7 T 18-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CH53_1949 a76672df31c9c71954759b5ba0f7545e 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 3.6E-7 T 18-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CH53_1949 a76672df31c9c71954759b5ba0f7545e 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 3.6E-7 T 18-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CH53_1949 a76672df31c9c71954759b5ba0f7545e 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 3.6E-7 T 18-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CH53_1949 a76672df31c9c71954759b5ba0f7545e 507 SMART SM00382 210 390 1.4E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1949 a76672df31c9c71954759b5ba0f7545e 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 1.6E-209 T 18-10-2018 IPR004482 Mg chelatase-related protein CH53_1949 a76672df31c9c71954759b5ba0f7545e 507 SUPERFAMILY SSF54211 10 169 3.68E-29 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_1949 a76672df31c9c71954759b5ba0f7545e 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 3.5E-29 T 18-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 SUPERFAMILY SSF53784 3 315 6.67E-110 T 18-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 PIRSF PIRSF000532 1 327 2.8E-123 T 18-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 122 139 3.0E-82 T 18-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 214 226 3.0E-82 T 18-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 3.0E-82 T 18-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 160 176 3.0E-82 T 18-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 3.0E-82 T 18-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 140 158 3.0E-82 T 18-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 195 3.0E-82 T 18-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 263 3.0E-82 T 18-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 3.0E-82 T 18-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 Pfam PF00365 Phosphofructokinase 4 277 1.0E-107 T 18-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 Gene3D G3DSA:3.40.50.460 144 253 7.2E-114 T 18-10-2018 CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 327 45.166 T 18-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 Gene3D G3DSA:3.40.50.450 4 281 7.2E-114 T 18-10-2018 CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 ProSitePatterns PS00433 Phosphofructokinase signature. 245 263 - T 18-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CH53_1887 7bf9cfe33b1da926296c2a4d017d82a1 327 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 302 5.6E-121 T 18-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CH53_4271 fd6bd34ec1e1f630c580e05dc146d88e 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 4.5E-14 T 18-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CH53_4271 fd6bd34ec1e1f630c580e05dc146d88e 263 SUPERFAMILY SSF55781 77 259 1.11E-52 T 18-10-2018 CH53_4271 fd6bd34ec1e1f630c580e05dc146d88e 263 SUPERFAMILY SSF46785 13 86 8.84E-16 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_4271 fd6bd34ec1e1f630c580e05dc146d88e 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 2.8E-40 T 18-10-2018 IPR014757 Transcription regulator IclR, C-terminal CH53_4271 fd6bd34ec1e1f630c580e05dc146d88e 263 SMART SM00346 13 102 1.4E-36 T 18-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CH53_4271 fd6bd34ec1e1f630c580e05dc146d88e 263 Gene3D G3DSA:1.10.10.10 6 82 2.3E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4271 fd6bd34ec1e1f630c580e05dc146d88e 263 Gene3D G3DSA:3.30.450.40 85 263 4.4E-65 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_237 149374dfdf6d0152309cfe9d1a1f8c6a 826 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 62 823 0.0 T 18-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 CH53_237 149374dfdf6d0152309cfe9d1a1f8c6a 826 Pfam PF01568 Molydopterin dinucleotide binding domain 683 797 1.7E-23 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CH53_237 149374dfdf6d0152309cfe9d1a1f8c6a 826 Gene3D G3DSA:2.40.40.20 657 820 4.0E-48 T 18-10-2018 CH53_237 149374dfdf6d0152309cfe9d1a1f8c6a 826 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 506 523 - T 18-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CH53_237 149374dfdf6d0152309cfe9d1a1f8c6a 826 Gene3D G3DSA:3.40.228.10 198 649 3.4E-232 T 18-10-2018 CH53_237 149374dfdf6d0152309cfe9d1a1f8c6a 826 SUPERFAMILY SSF53706 63 683 1.06E-168 T 18-10-2018 CH53_237 149374dfdf6d0152309cfe9d1a1f8c6a 826 Pfam PF00384 Molybdopterin oxidoreductase 105 563 3.2E-93 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_237 149374dfdf6d0152309cfe9d1a1f8c6a 826 Gene3D G3DSA:3.90.55.10 61 623 3.4E-232 T 18-10-2018 CH53_237 149374dfdf6d0152309cfe9d1a1f8c6a 826 SUPERFAMILY SSF50692 676 820 2.26E-38 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CH53_237 149374dfdf6d0152309cfe9d1a1f8c6a 826 Gene3D G3DSA:3.40.50.740 105 572 3.4E-232 T 18-10-2018 CH53_606 2b08e0c7913a80d1d85471e7816d88c7 299 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 6 299 46.335 T 18-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 CH53_606 2b08e0c7913a80d1d85471e7816d88c7 299 Pfam PF00781 Diacylglycerol kinase catalytic domain 7 129 1.6E-27 T 18-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CH53_606 2b08e0c7913a80d1d85471e7816d88c7 299 Gene3D G3DSA:2.60.200.40 126 284 3.8E-89 T 18-10-2018 CH53_606 2b08e0c7913a80d1d85471e7816d88c7 299 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 7 298 8.9E-143 T 18-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 CH53_606 2b08e0c7913a80d1d85471e7816d88c7 299 Gene3D G3DSA:3.40.50.10330 25 287 3.8E-89 T 18-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 CH53_606 2b08e0c7913a80d1d85471e7816d88c7 299 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 4 293 7.1E-91 T 18-10-2018 IPR005218 Diacylglycerol/lipid kinase CH53_606 2b08e0c7913a80d1d85471e7816d88c7 299 SUPERFAMILY SSF111331 2 296 2.62E-71 T 18-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CH53_606 2b08e0c7913a80d1d85471e7816d88c7 299 SMART SM00046 6 133 9.5E-19 T 18-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CH53_2409 f639a324308b3efa363b8e3828d7140f 163 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 148 3.5E-47 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CH53_2409 f639a324308b3efa363b8e3828d7140f 163 PRINTS PR00446 Hydrogen uptake protein signature 15 26 6.2E-23 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CH53_2409 f639a324308b3efa363b8e3828d7140f 163 PRINTS PR00446 Hydrogen uptake protein signature 67 83 6.2E-23 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CH53_2409 f639a324308b3efa363b8e3828d7140f 163 PRINTS PR00446 Hydrogen uptake protein signature 35 52 6.2E-23 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CH53_2409 f639a324308b3efa363b8e3828d7140f 163 PRINTS PR00446 Hydrogen uptake protein signature 56 66 6.2E-23 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CH53_2409 f639a324308b3efa363b8e3828d7140f 163 PRINTS PR00446 Hydrogen uptake protein signature 3 15 6.2E-23 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CH53_2409 f639a324308b3efa363b8e3828d7140f 163 SUPERFAMILY SSF53163 1 153 1.12E-45 T 18-10-2018 IPR023430 Peptidase HybD-like domain superfamily CH53_2409 f639a324308b3efa363b8e3828d7140f 163 Gene3D G3DSA:3.40.50.1450 1 160 1.8E-45 T 18-10-2018 IPR023430 Peptidase HybD-like domain superfamily CH53_2409 f639a324308b3efa363b8e3828d7140f 163 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 151 5.7E-49 T 18-10-2018 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 CH53_2409 f639a324308b3efa363b8e3828d7140f 163 Pfam PF01750 Hydrogenase maturation protease 20 146 6.1E-33 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CH53_1707 284bd9ff9f4872e2a9e3f1ea76b33ce0 552 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 552 55.406 T 18-10-2018 IPR023018 Transport protein YidE, putative CH53_1707 284bd9ff9f4872e2a9e3f1ea76b33ce0 552 Gene3D G3DSA:3.30.70.1450 198 274 7.4E-9 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_1707 284bd9ff9f4872e2a9e3f1ea76b33ce0 552 SUPERFAMILY SSF116726 272 356 7.32E-12 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_1707 284bd9ff9f4872e2a9e3f1ea76b33ce0 552 Gene3D G3DSA:3.30.70.1450 288 364 3.7E-10 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_1707 284bd9ff9f4872e2a9e3f1ea76b33ce0 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 4.9E-44 T 18-10-2018 IPR006512 YidE/YbjL duplication CH53_1707 284bd9ff9f4872e2a9e3f1ea76b33ce0 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 2.0E-49 T 18-10-2018 IPR006512 YidE/YbjL duplication CH53_1707 284bd9ff9f4872e2a9e3f1ea76b33ce0 552 Pfam PF02080 TrkA-C domain 293 358 2.6E-8 T 18-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CH53_1707 284bd9ff9f4872e2a9e3f1ea76b33ce0 552 Pfam PF06826 Predicted Permease Membrane Region 374 546 7.7E-46 T 18-10-2018 IPR006512 YidE/YbjL duplication CH53_1707 284bd9ff9f4872e2a9e3f1ea76b33ce0 552 Pfam PF06826 Predicted Permease Membrane Region 10 179 1.3E-46 T 18-10-2018 IPR006512 YidE/YbjL duplication CH53_1707 284bd9ff9f4872e2a9e3f1ea76b33ce0 552 SUPERFAMILY SSF116726 206 271 1.44E-9 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CH53_503 14af81d27a44229bb019d791e958e490 414 Pfam PF07690 Major Facilitator Superfamily 219 399 2.0E-16 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_503 14af81d27a44229bb019d791e958e490 414 SUPERFAMILY SSF103473 5 391 5.75E-47 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_503 14af81d27a44229bb019d791e958e490 414 Gene3D G3DSA:1.20.1250.20 2 186 1.1E-20 T 18-10-2018 CH53_503 14af81d27a44229bb019d791e958e490 414 Gene3D G3DSA:1.20.1250.20 215 411 1.4E-20 T 18-10-2018 CH53_2924 0edc0310ab6743f87a7632df57b0e48b 304 SUPERFAMILY SSF117892 49 183 1.02E-40 T 18-10-2018 IPR036013 Band 7/SPFH domain superfamily CH53_2924 0edc0310ab6743f87a7632df57b0e48b 304 Gene3D G3DSA:3.30.479.30 46 178 2.0E-42 T 18-10-2018 CH53_2924 0edc0310ab6743f87a7632df57b0e48b 304 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 18-10-2018 IPR018080 Band 7/stomatin-like, conserved site CH53_2924 0edc0310ab6743f87a7632df57b0e48b 304 Pfam PF01145 SPFH domain / Band 7 family 22 200 9.4E-31 T 18-10-2018 IPR001107 Band 7 domain CH53_2924 0edc0310ab6743f87a7632df57b0e48b 304 SMART SM00244 18 176 1.1E-59 T 18-10-2018 IPR001107 Band 7 domain CH53_2924 0edc0310ab6743f87a7632df57b0e48b 304 PRINTS PR00721 Stomatin signature 128 151 3.2E-27 T 18-10-2018 IPR001972 Stomatin family GO:0016020 CH53_2924 0edc0310ab6743f87a7632df57b0e48b 304 PRINTS PR00721 Stomatin signature 171 192 3.2E-27 T 18-10-2018 IPR001972 Stomatin family GO:0016020 CH53_2924 0edc0310ab6743f87a7632df57b0e48b 304 PRINTS PR00721 Stomatin signature 152 170 3.2E-27 T 18-10-2018 IPR001972 Stomatin family GO:0016020 CH53_2924 0edc0310ab6743f87a7632df57b0e48b 304 PRINTS PR00721 Stomatin signature 108 125 3.2E-27 T 18-10-2018 IPR001972 Stomatin family GO:0016020 CH53_2924 0edc0310ab6743f87a7632df57b0e48b 304 PRINTS PR00721 Stomatin signature 73 94 3.2E-27 T 18-10-2018 IPR001972 Stomatin family GO:0016020 CH53_2953 5c2bb8596be62279ac573746aa7bf43b 63 SUPERFAMILY SSF46689 3 49 4.66E-5 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_214 2620b3b4f20598528bfe3d3eff29ce60 431 TIGRFAM TIGR00814 stp: serine transporter 20 419 4.4E-179 T 18-10-2018 IPR004694 Hydroxy amino acid transporter GO:0006865|GO:0015171|GO:0016021 CH53_217 1b051ffba79427cdd7939793de59ee61 455 SUPERFAMILY SSF54631 343 452 4.3E-19 T 18-10-2018 CH53_217 1b051ffba79427cdd7939793de59ee61 455 Gene3D G3DSA:3.40.50.1100 40 153 1.1E-109 T 18-10-2018 CH53_217 1b051ffba79427cdd7939793de59ee61 455 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 18-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CH53_217 1b051ffba79427cdd7939793de59ee61 455 SUPERFAMILY SSF53686 4 320 2.23E-94 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH53_217 1b051ffba79427cdd7939793de59ee61 455 Pfam PF00571 CBS domain 344 387 4.0E-6 T 18-10-2018 IPR000644 CBS domain CH53_217 1b051ffba79427cdd7939793de59ee61 455 Pfam PF00571 CBS domain 401 448 0.0018 T 18-10-2018 IPR000644 CBS domain CH53_217 1b051ffba79427cdd7939793de59ee61 455 Gene3D G3DSA:3.10.580.10 336 454 9.8E-19 T 18-10-2018 CH53_217 1b051ffba79427cdd7939793de59ee61 455 Gene3D G3DSA:3.40.50.1100 9 309 1.1E-109 T 18-10-2018 CH53_217 1b051ffba79427cdd7939793de59ee61 455 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 301 2.3E-64 T 18-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CH53_217 1b051ffba79427cdd7939793de59ee61 455 SMART SM00116 342 389 8.7E-5 T 18-10-2018 IPR000644 CBS domain CH53_217 1b051ffba79427cdd7939793de59ee61 455 SMART SM00116 406 451 91.0 T 18-10-2018 IPR000644 CBS domain CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 Gene3D G3DSA:2.40.37.10 216 351 6.6E-111 T 18-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 SUPERFAMILY SSF50621 227 354 4.19E-42 T 18-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 Pfam PF00842 Alanine racemase, C-terminal domain 232 352 1.5E-37 T 18-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 18-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 SUPERFAMILY SSF51419 10 233 1.6E-63 T 18-10-2018 IPR029066 PLP-binding barrel CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 Hamap MF_01201 Alanine racemase. 2 356 32.141 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 PRINTS PR00992 Alanine racemase signature 248 263 2.9E-69 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 PRINTS PR00992 Alanine racemase signature 61 79 2.9E-69 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 PRINTS PR00992 Alanine racemase signature 190 217 2.9E-69 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 PRINTS PR00992 Alanine racemase signature 338 351 2.9E-69 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 PRINTS PR00992 Alanine racemase signature 286 303 2.9E-69 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 PRINTS PR00992 Alanine racemase signature 121 133 2.9E-69 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 PRINTS PR00992 Alanine racemase signature 27 43 2.9E-69 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 PRINTS PR00992 Alanine racemase signature 155 166 2.9E-69 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 PRINTS PR00992 Alanine racemase signature 265 280 2.9E-69 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 TIGRFAM TIGR00492 alr: alanine racemase 5 354 4.3E-117 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 Gene3D G3DSA:3.20.20.10 11 215 6.6E-111 T 18-10-2018 IPR029066 PLP-binding barrel CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 SMART SM01005 232 356 4.1E-56 T 18-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_3839 bff1837ac5f1700fcf89435db0cf34f1 358 Pfam PF01168 Alanine racemase, N-terminal domain 10 217 2.2E-65 T 18-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CH53_2090 3f0db8b79c3aa21e2123b26b5ffd87e7 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 1.1E-70 T 18-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CH53_2090 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SMART SM00738 6 115 2.0E-50 T 18-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CH53_2090 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Pfam PF02357 Transcription termination factor nusG 7 112 2.1E-27 T 18-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CH53_2090 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.616 T 18-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CH53_2090 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Gene3D G3DSA:3.30.70.940 1 121 6.5E-48 T 18-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CH53_2090 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Gene3D G3DSA:2.30.30.30 122 180 2.3E-26 T 18-10-2018 IPR014722 Ribosomal protein L2, domain 2 CH53_2090 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SUPERFAMILY SSF50104 125 180 1.15E-19 T 18-10-2018 IPR008991 Translation protein SH3-like domain superfamily CH53_2090 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Pfam PF00467 KOW motif 130 162 9.5E-8 T 18-10-2018 IPR005824 KOW CH53_2090 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SMART SM00739 127 154 2.0E-6 T 18-10-2018 IPR005824 KOW CH53_2090 3f0db8b79c3aa21e2123b26b5ffd87e7 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 18-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CH53_2090 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SUPERFAMILY SSF82679 6 116 3.4E-40 T 18-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CH53_2090 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 18-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CH53_2090 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 18-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CH53_2090 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 18-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CH53_986 1487cbc702623d9a5b8d2a0c50b14029 287 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 1.7E-114 T 18-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CH53_986 1487cbc702623d9a5b8d2a0c50b14029 287 SUPERFAMILY SSF53335 6 283 7.44E-88 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_986 1487cbc702623d9a5b8d2a0c50b14029 287 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 38.758 T 18-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CH53_986 1487cbc702623d9a5b8d2a0c50b14029 287 Pfam PF17284 Spermidine synthase tetramerisation domain 6 57 1.8E-17 T 18-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CH53_986 1487cbc702623d9a5b8d2a0c50b14029 287 Gene3D G3DSA:2.30.140.10 1 54 4.9E-26 T 18-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CH53_986 1487cbc702623d9a5b8d2a0c50b14029 287 Pfam PF01564 Spermine/spermidine synthase domain 60 240 6.3E-66 T 18-10-2018 CH53_986 1487cbc702623d9a5b8d2a0c50b14029 287 Gene3D G3DSA:3.40.50.150 55 286 1.1E-79 T 18-10-2018 CH53_986 1487cbc702623d9a5b8d2a0c50b14029 287 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 18-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CH53_815 f596e1a3d2c1f1f36586e2715b946be6 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 1.9E-59 T 18-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase CH53_815 f596e1a3d2c1f1f36586e2715b946be6 188 Gene3D G3DSA:1.10.150.240 18 89 6.4E-46 T 18-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CH53_815 f596e1a3d2c1f1f36586e2715b946be6 188 Gene3D G3DSA:3.40.50.1000 7 185 6.4E-46 T 18-10-2018 IPR023214 HAD superfamily CH53_815 f596e1a3d2c1f1f36586e2715b946be6 188 SUPERFAMILY SSF56784 4 185 9.34E-44 T 18-10-2018 IPR036412 HAD-like superfamily CH53_815 f596e1a3d2c1f1f36586e2715b946be6 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 1.4E-29 T 18-10-2018 CH53_815 f596e1a3d2c1f1f36586e2715b946be6 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 123 183 9.5E-14 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_3235 0f6162a837ba26894562631c22dcac08 420 SUPERFAMILY SSF48230 78 353 1.46E-58 T 18-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 CH53_3235 0f6162a837ba26894562631c22dcac08 420 Pfam PF05426 Alginate lyase 70 350 2.8E-91 T 18-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 CH53_3235 0f6162a837ba26894562631c22dcac08 420 Gene3D G3DSA:1.50.10.100 28 394 1.7E-124 T 18-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 CH53_626 49357148d4ba3b8b92ef7ad437520148 393 SMART SM00564 289 321 150.0 T 18-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CH53_626 49357148d4ba3b8b92ef7ad437520148 393 SMART SM00564 115 147 0.37 T 18-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CH53_626 49357148d4ba3b8b92ef7ad437520148 393 SMART SM00564 65 96 0.22 T 18-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CH53_626 49357148d4ba3b8b92ef7ad437520148 393 SMART SM00564 201 232 24.0 T 18-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CH53_626 49357148d4ba3b8b92ef7ad437520148 393 SMART SM00564 156 187 6.2E-4 T 18-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CH53_626 49357148d4ba3b8b92ef7ad437520148 393 SMART SM00564 252 283 7.7E-6 T 18-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CH53_626 49357148d4ba3b8b92ef7ad437520148 393 SMART SM00564 330 362 2.3 T 18-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CH53_626 49357148d4ba3b8b92ef7ad437520148 393 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 392 3.1E-135 T 18-10-2018 IPR017687 Outer membrane protein assembly factor BamB CH53_626 49357148d4ba3b8b92ef7ad437520148 393 Pfam PF13360 PQQ-like domain 78 320 2.2E-50 T 18-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat CH53_626 49357148d4ba3b8b92ef7ad437520148 393 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 393 40.887 T 18-10-2018 IPR017687 Outer membrane protein assembly factor BamB CH53_626 49357148d4ba3b8b92ef7ad437520148 393 Gene3D G3DSA:2.130.10.10 21 392 3.0E-94 T 18-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CH53_626 49357148d4ba3b8b92ef7ad437520148 393 SUPERFAMILY SSF50998 24 385 1.01E-76 T 18-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CH53_2530 e9ce53acacd0bb395c22d5fc414653fc 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 18-10-2018 CH53_2530 e9ce53acacd0bb395c22d5fc414653fc 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.0E-19 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_2530 e9ce53acacd0bb395c22d5fc414653fc 331 Gene3D G3DSA:1.10.260.40 1 57 2.2E-21 T 18-10-2018 CH53_2530 e9ce53acacd0bb395c22d5fc414653fc 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.9E-5 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_2530 e9ce53acacd0bb395c22d5fc414653fc 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.9E-5 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_2530 e9ce53acacd0bb395c22d5fc414653fc 331 SUPERFAMILY SSF47413 1 56 5.23E-17 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_2530 e9ce53acacd0bb395c22d5fc414653fc 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 321 4.8E-44 T 18-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH53_2530 e9ce53acacd0bb395c22d5fc414653fc 331 SUPERFAMILY SSF53822 62 319 1.61E-39 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_2530 e9ce53acacd0bb395c22d5fc414653fc 331 SMART SM00354 1 73 2.4E-23 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_2530 e9ce53acacd0bb395c22d5fc414653fc 331 Gene3D G3DSA:3.40.50.2300 63 305 1.6E-43 T 18-10-2018 CH53_2530 e9ce53acacd0bb395c22d5fc414653fc 331 Gene3D G3DSA:3.40.50.2300 161 295 1.6E-43 T 18-10-2018 CH53_3544 3d11ee66a09e696725b0a08e69096d32 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 4.5E-42 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CH53_3544 3d11ee66a09e696725b0a08e69096d32 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 4.5E-42 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CH53_3544 3d11ee66a09e696725b0a08e69096d32 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 4.5E-42 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CH53_3544 3d11ee66a09e696725b0a08e69096d32 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 4.5E-42 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CH53_3544 3d11ee66a09e696725b0a08e69096d32 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 4.5E-42 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CH53_3544 3d11ee66a09e696725b0a08e69096d32 382 Gene3D G3DSA:3.40.1690.10 217 359 9.7E-60 T 18-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CH53_3544 3d11ee66a09e696725b0a08e69096d32 382 SUPERFAMILY SSF160544 251 355 8.24E-41 T 18-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CH53_3544 3d11ee66a09e696725b0a08e69096d32 382 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 4.1E-125 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CH53_3544 3d11ee66a09e696725b0a08e69096d32 382 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 3.2E-133 T 18-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 CH53_1113 91f4a32c624e548631d41fc3d120fce9 230 Pfam PF10144 Bacterial virulence factor haemolysin 1 162 3.1E-67 T 18-10-2018 IPR019305 Uncharacterised protein family Smp CH53_3007 8bfe995dc7d5edbb5728403818d99770 232 Pfam PF00849 RNA pseudouridylate synthase 25 181 4.3E-26 T 18-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_3007 8bfe995dc7d5edbb5728403818d99770 232 SUPERFAMILY SSF55120 11 226 1.76E-58 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_3007 8bfe995dc7d5edbb5728403818d99770 232 Gene3D G3DSA:3.30.2350.10 8 229 7.1E-63 T 18-10-2018 CH53_3007 8bfe995dc7d5edbb5728403818d99770 232 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 18-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_2829 7d0ff59f83f4b6070b8c5176251e7e97 200 Gene3D G3DSA:3.40.30.10 1 197 1.4E-71 T 18-10-2018 CH53_2829 7d0ff59f83f4b6070b8c5176251e7e97 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 6.4E-11 T 18-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CH53_2829 7d0ff59f83f4b6070b8c5176251e7e97 200 Pfam PF00578 AhpC/TSA family 5 139 3.6E-35 T 18-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CH53_2829 7d0ff59f83f4b6070b8c5176251e7e97 200 SUPERFAMILY SSF52833 1 194 1.07E-64 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_2829 7d0ff59f83f4b6070b8c5176251e7e97 200 PIRSF PIRSF000239 1 199 8.3E-58 T 18-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CH53_2899 147accccaef058518845e82cd284fced 130 Gene3D G3DSA:3.10.180.10 6 130 2.2E-33 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_2899 147accccaef058518845e82cd284fced 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 2.8E-14 T 18-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CH53_2899 147accccaef058518845e82cd284fced 130 SUPERFAMILY SSF54593 6 129 1.48E-24 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_230 e56b94dcf5936b020648a2b90bf26e25 360 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 20 357 4.2E-126 T 18-10-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 CH53_230 e56b94dcf5936b020648a2b90bf26e25 360 Pfam PF03601 Conserved hypothetical protein 698 23 337 9.0E-108 T 18-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CH53_2606 98eaeb144db19b416fce5c86ff5e8954 387 Gene3D G3DSA:3.40.50.1260 10 378 2.2E-154 T 18-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2606 98eaeb144db19b416fce5c86ff5e8954 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.2E-82 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2606 98eaeb144db19b416fce5c86ff5e8954 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.2E-82 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2606 98eaeb144db19b416fce5c86ff5e8954 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.2E-82 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2606 98eaeb144db19b416fce5c86ff5e8954 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.2E-82 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2606 98eaeb144db19b416fce5c86ff5e8954 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.2E-82 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2606 98eaeb144db19b416fce5c86ff5e8954 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.2E-82 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2606 98eaeb144db19b416fce5c86ff5e8954 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.2E-82 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2606 98eaeb144db19b416fce5c86ff5e8954 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.2E-82 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2606 98eaeb144db19b416fce5c86ff5e8954 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.2E-82 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2606 98eaeb144db19b416fce5c86ff5e8954 387 PIRSF PIRSF000724 1 387 1.1E-131 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2606 98eaeb144db19b416fce5c86ff5e8954 387 Pfam PF00162 Phosphoglycerate kinase 6 373 8.6E-139 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2606 98eaeb144db19b416fce5c86ff5e8954 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.093 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2606 98eaeb144db19b416fce5c86ff5e8954 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 18-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2606 98eaeb144db19b416fce5c86ff5e8954 387 SUPERFAMILY SSF53748 3 383 1.18E-143 T 18-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_2606 98eaeb144db19b416fce5c86ff5e8954 387 Gene3D G3DSA:3.40.50.1260 165 373 2.2E-154 T 18-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CH53_707 02d30e884c156603bddf9cab44f046f6 113 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 47 107 4.1E-11 T 18-10-2018 IPR039561 Peptidase M15C GO:0008233 CH53_707 02d30e884c156603bddf9cab44f046f6 113 SUPERFAMILY SSF55166 11 107 8.63E-16 T 18-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CH53_707 02d30e884c156603bddf9cab44f046f6 113 Gene3D G3DSA:3.30.1380.10 1 107 3.3E-13 T 18-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CH53_901 cc008dfa6150d54523e9b1dd79a29d6c 846 Gene3D G3DSA:3.10.20.410 37 160 6.8E-23 T 18-10-2018 CH53_901 cc008dfa6150d54523e9b1dd79a29d6c 846 Pfam PF00577 Outer membrane usher protein 201 749 1.4E-187 T 18-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 CH53_901 cc008dfa6150d54523e9b1dd79a29d6c 846 Gene3D G3DSA:2.60.40.3110 274 362 2.3E-28 T 18-10-2018 CH53_901 cc008dfa6150d54523e9b1dd79a29d6c 846 Gene3D G3DSA:2.60.40.2070 758 835 1.2E-28 T 18-10-2018 CH53_901 cc008dfa6150d54523e9b1dd79a29d6c 846 Pfam PF13953 PapC C-terminal domain 760 816 3.8E-15 T 18-10-2018 IPR025949 PapC-like, C-terminal domain CH53_901 cc008dfa6150d54523e9b1dd79a29d6c 846 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 316 326 - T 18-10-2018 IPR018030 Fimbrial membrane usher, conserved site CH53_901 cc008dfa6150d54523e9b1dd79a29d6c 846 Gene3D G3DSA:2.60.40.2610 663 754 3.2E-15 T 18-10-2018 CH53_901 cc008dfa6150d54523e9b1dd79a29d6c 846 Pfam PF13954 PapC N-terminal domain 39 182 3.2E-38 T 18-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 CH53_901 cc008dfa6150d54523e9b1dd79a29d6c 846 SUPERFAMILY SSF141729 37 159 2.22E-31 T 18-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 CH53_1957 8dfc76612b4a7929439f931a81897074 492 SUPERFAMILY SSF48179 210 343 3.74E-39 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_1957 8dfc76612b4a7929439f931a81897074 492 SUPERFAMILY SSF48179 348 485 4.93E-41 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_1957 8dfc76612b4a7929439f931a81897074 492 SUPERFAMILY SSF51735 29 209 2.33E-57 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1957 8dfc76612b4a7929439f931a81897074 492 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 486 39.053 T 18-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CH53_1957 8dfc76612b4a7929439f931a81897074 492 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 9.4E-58 T 18-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CH53_1957 8dfc76612b4a7929439f931a81897074 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 483 1.1E-21 T 18-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CH53_1957 8dfc76612b4a7929439f931a81897074 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 9.0E-26 T 18-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CH53_1957 8dfc76612b4a7929439f931a81897074 492 Gene3D G3DSA:1.10.1040.10 209 492 4.9E-126 T 18-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CH53_1957 8dfc76612b4a7929439f931a81897074 492 Gene3D G3DSA:3.40.50.720 1 208 2.0E-86 T 18-10-2018 CH53_1957 8dfc76612b4a7929439f931a81897074 492 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 1.4E-133 T 18-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CH53_1103 3005bc19f3fddb2f46162e70bb20a9cb 485 PIRSF PIRSF000538 1 483 3.4E-48 T 18-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_1103 3005bc19f3fddb2f46162e70bb20a9cb 485 Gene3D G3DSA:3.30.420.40 232 485 4.0E-97 T 18-10-2018 CH53_1103 3005bc19f3fddb2f46162e70bb20a9cb 485 SUPERFAMILY SSF53067 243 460 2.41E-35 T 18-10-2018 CH53_1103 3005bc19f3fddb2f46162e70bb20a9cb 485 Hamap MF_01535 Rhamnulokinase [rhaB]. 1 478 54.744 T 18-10-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 CH53_1103 3005bc19f3fddb2f46162e70bb20a9cb 485 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 248 434 1.0E-29 T 18-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CH53_1103 3005bc19f3fddb2f46162e70bb20a9cb 485 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 2 455 1.2E-238 T 18-10-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 CH53_1103 3005bc19f3fddb2f46162e70bb20a9cb 485 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 238 2.7E-35 T 18-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CH53_1103 3005bc19f3fddb2f46162e70bb20a9cb 485 SUPERFAMILY SSF53067 2 240 6.47E-52 T 18-10-2018 CH53_1103 3005bc19f3fddb2f46162e70bb20a9cb 485 Gene3D G3DSA:3.30.420.40 1 231 3.8E-92 T 18-10-2018 CH53_3174 f45fb45ca731fffffc91b3ba5d82e2be 272 Pfam PF02517 CAAX protease self-immunity 172 259 1.1E-19 T 18-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 CH53_3569 fb458fc354f88e29735ef1b16966edda 452 Gene3D G3DSA:3.30.750.140 297 409 2.9E-37 T 18-10-2018 IPR038610 FliK-like, C-terminal domain superfamily CH53_3569 fb458fc354f88e29735ef1b16966edda 452 PRINTS PR01007 Flagellar hook-length control protein signature 283 305 9.2E-38 T 18-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CH53_3569 fb458fc354f88e29735ef1b16966edda 452 PRINTS PR01007 Flagellar hook-length control protein signature 306 328 9.2E-38 T 18-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CH53_3569 fb458fc354f88e29735ef1b16966edda 452 PRINTS PR01007 Flagellar hook-length control protein signature 331 349 9.2E-38 T 18-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CH53_3569 fb458fc354f88e29735ef1b16966edda 452 PRINTS PR01007 Flagellar hook-length control protein signature 349 364 9.2E-38 T 18-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CH53_3569 fb458fc354f88e29735ef1b16966edda 452 PRINTS PR01007 Flagellar hook-length control protein signature 364 387 9.2E-38 T 18-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CH53_3569 fb458fc354f88e29735ef1b16966edda 452 PRINTS PR01007 Flagellar hook-length control protein signature 55 68 9.2E-38 T 18-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CH53_3569 fb458fc354f88e29735ef1b16966edda 452 Pfam PF02120 Flagellar hook-length control protein FliK 316 398 4.7E-21 T 18-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal CH53_2723 8a151da480e4a762958e91a9f145cf80 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.451 T 18-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CH53_2723 8a151da480e4a762958e91a9f145cf80 185 Gene3D G3DSA:3.30.1360.40 35 100 6.0E-30 T 18-10-2018 CH53_2723 8a151da480e4a762958e91a9f145cf80 185 Gene3D G3DSA:1.10.132.20 101 185 3.6E-28 T 18-10-2018 CH53_2723 8a151da480e4a762958e91a9f145cf80 185 Pfam PF01765 Ribosome recycling factor 20 183 3.3E-62 T 18-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CH53_2723 8a151da480e4a762958e91a9f145cf80 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.3E-78 T 18-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CH53_2723 8a151da480e4a762958e91a9f145cf80 185 Gene3D G3DSA:1.10.132.20 1 34 7.7E-7 T 18-10-2018 CH53_2723 8a151da480e4a762958e91a9f145cf80 185 SUPERFAMILY SSF55194 2 184 1.06E-69 T 18-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 CH53_2976 808536a5d13ca65a2b6ff829da14c1dd 143 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 50 143 7.0E-28 T 18-10-2018 IPR004914 Antirestriction protein CH53_2976 808536a5d13ca65a2b6ff829da14c1dd 143 Gene3D G3DSA:1.10.472.120 2 143 4.8E-52 T 18-10-2018 CH53_2976 808536a5d13ca65a2b6ff829da14c1dd 143 Pfam PF03230 Antirestriction protein 53 143 6.2E-35 T 18-10-2018 IPR004914 Antirestriction protein CH53_2734 25a564b2a3c4c02b4238558604620e20 198 Gene3D G3DSA:3.30.420.10 2 197 6.2E-73 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CH53_2734 25a564b2a3c4c02b4238558604620e20 198 SUPERFAMILY SSF53098 5 196 2.88E-68 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_2734 25a564b2a3c4c02b4238558604620e20 198 Pfam PF01351 Ribonuclease HII 14 189 4.1E-38 T 18-10-2018 IPR024567 Ribonuclease HII/HIII domain CH53_2734 25a564b2a3c4c02b4238558604620e20 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 12 191 39.374 T 18-10-2018 IPR022898 Ribonuclease HII GO:0004523 CH53_2126 aee863a3f7916176f031e7a1cb1c8c50 221 Gene3D G3DSA:3.40.1080.10 1 218 2.9E-92 T 18-10-2018 CH53_2126 aee863a3f7916176f031e7a1cb1c8c50 221 SMART SM00882 5 198 2.5E-63 T 18-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CH53_2126 aee863a3f7916176f031e7a1cb1c8c50 221 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 204 2.1E-92 T 18-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CH53_2126 aee863a3f7916176f031e7a1cb1c8c50 221 SUPERFAMILY SSF100950 2 214 1.26E-67 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_2126 aee863a3f7916176f031e7a1cb1c8c50 221 Pfam PF01144 Coenzyme A transferase 6 196 6.4E-37 T 18-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CH53_2126 aee863a3f7916176f031e7a1cb1c8c50 221 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 43 51 - T 18-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 CH53_46 547f2879fc806652663441547781d127 312 Pfam PF04960 Glutaminase 25 309 1.2E-100 T 18-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CH53_46 547f2879fc806652663441547781d127 312 SUPERFAMILY SSF56601 4 309 1.74E-105 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CH53_46 547f2879fc806652663441547781d127 312 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 309 4.4E-109 T 18-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CH53_46 547f2879fc806652663441547781d127 312 Hamap MF_00313 Glutaminase [glsA]. 7 309 41.375 T 18-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CH53_46 547f2879fc806652663441547781d127 312 Gene3D G3DSA:3.40.710.10 2 311 2.7E-113 T 18-10-2018 CH53_2127 05b1a2da22a4724c2888fab79b8a0a4a 220 SUPERFAMILY SSF100950 2 217 2.14E-76 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_2127 05b1a2da22a4724c2888fab79b8a0a4a 220 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 18-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 CH53_2127 05b1a2da22a4724c2888fab79b8a0a4a 220 Gene3D G3DSA:3.40.1080.10 1 220 1.3E-78 T 18-10-2018 CH53_2127 05b1a2da22a4724c2888fab79b8a0a4a 220 Pfam PF01144 Coenzyme A transferase 8 214 2.0E-66 T 18-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CH53_2127 05b1a2da22a4724c2888fab79b8a0a4a 220 SMART SM00882 5 216 1.4E-68 T 18-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CH53_2127 05b1a2da22a4724c2888fab79b8a0a4a 220 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 4 215 9.8E-65 T 18-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CH53_2905 cadf3cf8526672258d6b661c8363da43 326 Gene3D G3DSA:3.40.50.1400 162 300 7.1E-92 T 18-10-2018 CH53_2905 cadf3cf8526672258d6b661c8363da43 326 Gene3D G3DSA:3.40.50.1400 6 318 7.1E-92 T 18-10-2018 CH53_2905 cadf3cf8526672258d6b661c8363da43 326 Pfam PF00762 Ferrochelatase 5 318 1.6E-108 T 18-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CH53_2905 cadf3cf8526672258d6b661c8363da43 326 TIGRFAM TIGR00109 hemH: ferrochelatase 2 318 4.5E-108 T 18-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CH53_2905 cadf3cf8526672258d6b661c8363da43 326 Hamap MF_00323 Ferrochelatase [hemH]. 3 319 37.788 T 18-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CH53_2905 cadf3cf8526672258d6b661c8363da43 326 SUPERFAMILY SSF53800 2 322 3.79E-101 T 18-10-2018 CH53_2905 cadf3cf8526672258d6b661c8363da43 326 ProSitePatterns PS00534 Ferrochelatase signature. 188 206 - T 18-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CH53_1993 ce2230c94df828329807558582e8bb68 848 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 18-10-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 CH53_1993 ce2230c94df828329807558582e8bb68 848 PIRSF PIRSF001444 1 847 0.0 T 18-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CH53_1993 ce2230c94df828329807558582e8bb68 848 Pfam PF01295 Adenylate cyclase, class-I 228 825 2.0E-262 T 18-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CH53_1993 ce2230c94df828329807558582e8bb68 848 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 18-10-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 CH53_1993 ce2230c94df828329807558582e8bb68 848 Pfam PF12633 Adenylate cyclase NT domain 5 200 6.9E-80 T 18-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 CH53_4125 7e171c1f8f53f2b0ed19f408f007f7e8 271 Pfam PF01497 Periplasmic binding protein 22 248 1.6E-29 T 18-10-2018 IPR002491 ABC transporter periplasmic binding domain CH53_4125 7e171c1f8f53f2b0ed19f408f007f7e8 271 SUPERFAMILY SSF53807 20 271 4.71E-47 T 18-10-2018 CH53_4125 7e171c1f8f53f2b0ed19f408f007f7e8 271 Gene3D G3DSA:3.40.50.1980 140 270 1.3E-42 T 18-10-2018 CH53_4125 7e171c1f8f53f2b0ed19f408f007f7e8 271 Gene3D G3DSA:3.40.50.1980 18 139 4.1E-36 T 18-10-2018 CH53_4047 4d5207847475726bb90c6ed7fabb281b 297 SUPERFAMILY SSF52402 15 233 1.96E-52 T 18-10-2018 CH53_4047 4d5207847475726bb90c6ed7fabb281b 297 PIRSF PIRSF004976 2 282 7.8E-70 T 18-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 CH53_4047 4d5207847475726bb90c6ed7fabb281b 297 Pfam PF01171 PP-loop family 41 201 1.2E-13 T 18-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CH53_4047 4d5207847475726bb90c6ed7fabb281b 297 Gene3D G3DSA:3.40.50.620 2 264 8.2E-48 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_4047 4d5207847475726bb90c6ed7fabb281b 297 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 8 269 55.783 T 18-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 CH53_3870 d1dee1946cda2fb6ab538e1d3d6150ab 199 SUPERFAMILY SSF57716 142 191 8.08E-18 T 18-10-2018 CH53_3870 d1dee1946cda2fb6ab538e1d3d6150ab 199 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 18-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CH53_3870 d1dee1946cda2fb6ab538e1d3d6150ab 199 SUPERFAMILY SSF52540 1 141 4.26E-41 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3870 d1dee1946cda2fb6ab538e1d3d6150ab 199 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.915 T 18-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CH53_3870 d1dee1946cda2fb6ab538e1d3d6150ab 199 Gene3D G3DSA:3.40.50.300 1 141 5.4E-26 T 18-10-2018 CH53_3870 d1dee1946cda2fb6ab538e1d3d6150ab 199 Gene3D G3DSA:3.30.60.20 144 190 4.0E-10 T 18-10-2018 CH53_3870 d1dee1946cda2fb6ab538e1d3d6150ab 199 PIRSF PIRSF035805 1 197 1.8E-59 T 18-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CH53_3870 d1dee1946cda2fb6ab538e1d3d6150ab 199 Pfam PF00265 Thymidine kinase 2 186 5.4E-62 T 18-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CH53_854 da1941aaddbc690a6d2394dceb904526 293 SUPERFAMILY SSF51658 16 279 1.7E-55 T 18-10-2018 IPR036237 Xylose isomerase-like superfamily CH53_854 da1941aaddbc690a6d2394dceb904526 293 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 4 283 4.7E-136 T 18-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 CH53_854 da1941aaddbc690a6d2394dceb904526 293 Gene3D G3DSA:3.20.20.150 2 286 1.6E-72 T 18-10-2018 CH53_854 da1941aaddbc690a6d2394dceb904526 293 Pfam PF01261 Xylose isomerase-like TIM barrel 23 234 1.6E-35 T 18-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CH53_925 1ff3101b53fc49a2451fdc1293b3d2d0 321 SMART SM00257 72 116 5.4E-10 T 18-10-2018 IPR018392 LysM domain CH53_925 1ff3101b53fc49a2451fdc1293b3d2d0 321 Gene3D G3DSA:3.10.350.10 66 120 3.1E-10 T 18-10-2018 IPR036779 LysM domain superfamily CH53_925 1ff3101b53fc49a2451fdc1293b3d2d0 321 Pfam PF01551 Peptidase family M23 221 314 3.8E-31 T 18-10-2018 IPR016047 Peptidase M23 CH53_925 1ff3101b53fc49a2451fdc1293b3d2d0 321 Gene3D G3DSA:2.70.70.10 171 321 4.9E-38 T 18-10-2018 IPR011055 Duplicated hybrid motif CH53_925 1ff3101b53fc49a2451fdc1293b3d2d0 321 Pfam PF01476 LysM domain 73 114 6.3E-9 T 18-10-2018 IPR018392 LysM domain CH53_925 1ff3101b53fc49a2451fdc1293b3d2d0 321 SUPERFAMILY SSF51261 72 318 5.75E-50 T 18-10-2018 IPR011055 Duplicated hybrid motif CH53_1687 8e8ab99ebf805408931071fead3e6b55 96 SUPERFAMILY SSF143011 1 95 7.98E-23 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CH53_1687 8e8ab99ebf805408931071fead3e6b55 96 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 4 96 9.2E-28 T 18-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin CH53_1687 8e8ab99ebf805408931071fead3e6b55 96 Gene3D G3DSA:3.30.2310.20 3 96 2.1E-28 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CH53_1687 8e8ab99ebf805408931071fead3e6b55 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 6 95 9.1E-23 T 18-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CH53_1687 8e8ab99ebf805408931071fead3e6b55 96 PIRSF PIRSF006156 4 96 2.6E-17 T 18-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin CH53_1458 42262e8b4b55da21a8823cdb021615e6 136 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 1.2E-45 T 18-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CH53_1458 42262e8b4b55da21a8823cdb021615e6 136 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 132 24.215 T 18-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CH53_1458 42262e8b4b55da21a8823cdb021615e6 136 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 18-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site CH53_1458 42262e8b4b55da21a8823cdb021615e6 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 5.2E-12 T 18-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CH53_1458 42262e8b4b55da21a8823cdb021615e6 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 5.2E-12 T 18-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CH53_1458 42262e8b4b55da21a8823cdb021615e6 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 5.2E-12 T 18-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CH53_1458 42262e8b4b55da21a8823cdb021615e6 136 SUPERFAMILY SSF81330 12 127 4.58E-35 T 18-10-2018 IPR036019 Gated mechanosensitive channel CH53_1458 42262e8b4b55da21a8823cdb021615e6 136 Gene3D G3DSA:1.10.1200.120 3 134 1.3E-42 T 18-10-2018 IPR036019 Gated mechanosensitive channel CH53_1458 42262e8b4b55da21a8823cdb021615e6 136 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 9.7E-54 T 18-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CH53_420 59fc2c3736df157fc5e2dbaba721c689 237 SUPERFAMILY SSF52833 65 229 2.84E-37 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_420 59fc2c3736df157fc5e2dbaba721c689 237 Gene3D G3DSA:3.40.30.10 66 237 1.6E-42 T 18-10-2018 CH53_420 59fc2c3736df157fc5e2dbaba721c689 237 Pfam PF01323 DSBA-like thioredoxin domain 88 227 6.4E-20 T 18-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CH53_2714 ab84d43c5c4c369f0f2fc5e4d5dc6285 257 SUPERFAMILY SSF55120 2 236 2.72E-62 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_2714 ab84d43c5c4c369f0f2fc5e4d5dc6285 257 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 18-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_2714 ab84d43c5c4c369f0f2fc5e4d5dc6285 257 Pfam PF00849 RNA pseudouridylate synthase 10 170 2.0E-34 T 18-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_2714 ab84d43c5c4c369f0f2fc5e4d5dc6285 257 Gene3D G3DSA:3.30.2350.10 3 234 4.5E-62 T 18-10-2018 CH53_2746 dee3929750bda24c6d1d28eda684522f 572 Gene3D G3DSA:3.40.50.800 4 554 5.7E-242 T 18-10-2018 IPR036621 Anticodon-binding domain superfamily CH53_2746 dee3929750bda24c6d1d28eda684522f 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 377 3.2E-26 T 18-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CH53_2746 dee3929750bda24c6d1d28eda684522f 572 Gene3D G3DSA:3.30.930.10 11 465 5.7E-242 T 18-10-2018 CH53_2746 dee3929750bda24c6d1d28eda684522f 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 42.832 T 18-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CH53_2746 dee3929750bda24c6d1d28eda684522f 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 566 1.1E-270 T 18-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CH53_2746 dee3929750bda24c6d1d28eda684522f 572 Gene3D G3DSA:3.90.960.10 240 389 5.7E-242 T 18-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CH53_2746 dee3929750bda24c6d1d28eda684522f 572 PIRSF PIRSF001535 1 572 1.7E-275 T 18-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CH53_2746 dee3929750bda24c6d1d28eda684522f 572 SUPERFAMILY SSF55826 218 390 2.49E-31 T 18-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CH53_2746 dee3929750bda24c6d1d28eda684522f 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.9E-19 T 18-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CH53_2746 dee3929750bda24c6d1d28eda684522f 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.9E-19 T 18-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CH53_2746 dee3929750bda24c6d1d28eda684522f 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.9E-19 T 18-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CH53_2746 dee3929750bda24c6d1d28eda684522f 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.9E-19 T 18-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CH53_2746 dee3929750bda24c6d1d28eda684522f 572 SUPERFAMILY SSF52954 462 570 6.64E-33 T 18-10-2018 CH53_2746 dee3929750bda24c6d1d28eda684522f 572 SUPERFAMILY SSF55681 10 478 6.76E-107 T 18-10-2018 CH53_2746 dee3929750bda24c6d1d28eda684522f 572 Pfam PF03129 Anticodon binding domain 475 567 1.0E-20 T 18-10-2018 IPR004154 Anticodon-binding CH53_2746 dee3929750bda24c6d1d28eda684522f 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 3.6E-49 T 18-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3163 dc7859b7786c0db1d2992d6f6b4cb6ab 241 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 229 7.2E-63 T 18-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CH53_3163 dc7859b7786c0db1d2992d6f6b4cb6ab 241 Pfam PF04973 Nicotinamide mononucleotide transporter 23 227 3.5E-54 T 18-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CH53_2381 7ef4c8b4376c8e2cc991d9fbecfb9e9e 427 Gene3D G3DSA:3.40.50.300 171 420 1.4E-73 T 18-10-2018 CH53_2381 7ef4c8b4376c8e2cc991d9fbecfb9e9e 427 SUPERFAMILY SSF52540 54 364 6.07E-58 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2381 7ef4c8b4376c8e2cc991d9fbecfb9e9e 427 Gene3D G3DSA:3.30.450.380 3 168 8.3E-38 T 18-10-2018 CH53_2381 7ef4c8b4376c8e2cc991d9fbecfb9e9e 427 Pfam PF00437 Type II/IV secretion system protein 74 349 2.5E-81 T 18-10-2018 IPR001482 Type II/IV secretion system protein CH53_3273 d38a737fc09d61161ed03c5c418d5bbe 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 280 1.8E-121 T 18-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 CH53_3273 d38a737fc09d61161ed03c5c418d5bbe 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 84 93 - T 18-10-2018 IPR024002 Formate/nitrite transporter, conserved site CH53_3273 d38a737fc09d61161ed03c5c418d5bbe 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 281 5.1E-90 T 18-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 CH53_3273 d38a737fc09d61161ed03c5c418d5bbe 285 Gene3D G3DSA:1.20.1080.10 1 269 7.5E-98 T 18-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CH53_3273 d38a737fc09d61161ed03c5c418d5bbe 285 Pfam PF01226 Formate/nitrite transporter 15 277 2.1E-74 T 18-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 CH53_3273 d38a737fc09d61161ed03c5c418d5bbe 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 169 179 - T 18-10-2018 IPR024002 Formate/nitrite transporter, conserved site CH53_3398 43988cf82c297d89402c1aa39a813684 465 PIRSF PIRSF006603 10 461 5.4E-68 T 18-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CH53_3398 43988cf82c297d89402c1aa39a813684 465 TIGRFAM TIGR00797 matE: MATE efflux family protein 30 434 1.4E-64 T 18-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CH53_3398 43988cf82c297d89402c1aa39a813684 465 Pfam PF01554 MatE 30 190 3.1E-36 T 18-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CH53_3398 43988cf82c297d89402c1aa39a813684 465 Pfam PF01554 MatE 260 421 1.3E-18 T 18-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CH53_1791 528955c1985ed04507358a9d3452e798 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 3.5E-6 T 18-10-2018 CH53_1791 528955c1985ed04507358a9d3452e798 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 3.5E-6 T 18-10-2018 CH53_1791 528955c1985ed04507358a9d3452e798 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 3.5E-6 T 18-10-2018 CH53_1791 528955c1985ed04507358a9d3452e798 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 3.5E-6 T 18-10-2018 CH53_1791 528955c1985ed04507358a9d3452e798 474 SUPERFAMILY SSF103473 13 451 7.06E-60 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_1791 528955c1985ed04507358a9d3452e798 474 Gene3D G3DSA:1.20.1250.20 256 453 4.1E-13 T 18-10-2018 CH53_1791 528955c1985ed04507358a9d3452e798 474 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 430 4.0E-73 T 18-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CH53_1791 528955c1985ed04507358a9d3452e798 474 Pfam PF07690 Major Facilitator Superfamily 16 405 1.9E-42 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_1791 528955c1985ed04507358a9d3452e798 474 Gene3D G3DSA:1.20.1720.10 12 247 3.0E-44 T 18-10-2018 CH53_4008 47108778ad175701c290b4c6e86da613 127 Pfam PF01042 Endoribonuclease L-PSP 13 122 1.5E-21 T 18-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CH53_4008 47108778ad175701c290b4c6e86da613 127 SUPERFAMILY SSF55298 1 125 3.3E-27 T 18-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CH53_4008 47108778ad175701c290b4c6e86da613 127 Gene3D G3DSA:3.30.1330.40 8 126 3.8E-28 T 18-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CH53_2954 79641238874ed01f1db0a10558285cf7 229 Gene3D G3DSA:3.40.190.10 101 201 3.9E-43 T 18-10-2018 CH53_2954 79641238874ed01f1db0a10558285cf7 229 Pfam PF03466 LysR substrate binding domain 24 224 1.4E-29 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_2954 79641238874ed01f1db0a10558285cf7 229 SUPERFAMILY SSF53850 26 225 1.81E-26 T 18-10-2018 CH53_2954 79641238874ed01f1db0a10558285cf7 229 Gene3D G3DSA:3.40.190.10 31 220 3.9E-43 T 18-10-2018 CH53_99 0c231723e4875d07e36ae042f12a7ab3 144 Pfam PF00486 Transcriptional regulatory protein, C terminal 56 130 5.0E-8 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_99 0c231723e4875d07e36ae042f12a7ab3 144 SUPERFAMILY SSF46894 52 130 4.54E-10 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_99 0c231723e4875d07e36ae042f12a7ab3 144 Gene3D G3DSA:1.10.10.10 41 134 9.6E-12 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2957 cf1b22dabd3b00447706f1efd159cf42 247 SUPERFAMILY SSF51735 2 247 4.09E-73 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2957 cf1b22dabd3b00447706f1efd159cf42 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.9E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2957 cf1b22dabd3b00447706f1efd159cf42 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.9E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2957 cf1b22dabd3b00447706f1efd159cf42 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.9E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2957 cf1b22dabd3b00447706f1efd159cf42 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 246 2.3E-56 T 18-10-2018 CH53_2957 cf1b22dabd3b00447706f1efd159cf42 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 9.7E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2957 cf1b22dabd3b00447706f1efd159cf42 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 9.7E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2957 cf1b22dabd3b00447706f1efd159cf42 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 9.7E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2957 cf1b22dabd3b00447706f1efd159cf42 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 9.7E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2957 cf1b22dabd3b00447706f1efd159cf42 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 9.7E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2957 cf1b22dabd3b00447706f1efd159cf42 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 9.7E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2957 cf1b22dabd3b00447706f1efd159cf42 247 Gene3D G3DSA:3.40.50.720 1 246 6.4E-73 T 18-10-2018 CH53_3769 aeb5835f16fd11f5b360f9ab3cf232a1 566 Pfam PF00916 Sulfate permease family 29 414 3.8E-81 T 18-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CH53_3769 aeb5835f16fd11f5b360f9ab3cf232a1 566 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 18-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 CH53_3769 aeb5835f16fd11f5b360f9ab3cf232a1 566 Gene3D G3DSA:3.30.750.24 445 562 6.1E-22 T 18-10-2018 IPR036513 STAS domain superfamily CH53_3769 aeb5835f16fd11f5b360f9ab3cf232a1 566 SUPERFAMILY SSF52091 453 562 7.46E-14 T 18-10-2018 IPR036513 STAS domain superfamily CH53_3769 aeb5835f16fd11f5b360f9ab3cf232a1 566 Pfam PF01740 STAS domain 457 558 2.2E-9 T 18-10-2018 IPR002645 STAS domain CH53_3769 aeb5835f16fd11f5b360f9ab3cf232a1 566 TIGRFAM TIGR00815 sulP: sulfate permease 18 558 4.1E-134 T 18-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 CH53_3735 89c000ca2b42ccff7885f86195ed9501 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 18-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CH53_3735 89c000ca2b42ccff7885f86195ed9501 495 Gene3D G3DSA:3.40.309.10 250 440 2.3E-142 T 18-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CH53_3735 89c000ca2b42ccff7885f86195ed9501 495 SUPERFAMILY SSF53720 4 458 4.97E-124 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CH53_3735 89c000ca2b42ccff7885f86195ed9501 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 18-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CH53_3735 89c000ca2b42ccff7885f86195ed9501 495 Gene3D G3DSA:3.40.605.10 10 452 2.3E-142 T 18-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CH53_3735 89c000ca2b42ccff7885f86195ed9501 495 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 6 489 1.6E-260 T 18-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 CH53_3735 89c000ca2b42ccff7885f86195ed9501 495 Pfam PF00171 Aldehyde dehydrogenase family 12 461 7.0E-120 T 18-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CH53_3735 89c000ca2b42ccff7885f86195ed9501 495 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 4 489 58.394 T 18-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 CH53_1577 995b49ddc89297defe5da716a0f5766f 476 Pfam PF08323 Starch synthase catalytic domain 2 234 9.8E-71 T 18-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CH53_1577 995b49ddc89297defe5da716a0f5766f 476 Pfam PF00534 Glycosyl transferases group 1 289 448 3.6E-15 T 18-10-2018 IPR001296 Glycosyl transferase, family 1 CH53_1577 995b49ddc89297defe5da716a0f5766f 476 Gene3D G3DSA:3.40.50.2000 249 458 3.7E-187 T 18-10-2018 CH53_1577 995b49ddc89297defe5da716a0f5766f 476 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 45.824 T 18-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CH53_1577 995b49ddc89297defe5da716a0f5766f 476 Gene3D G3DSA:3.40.50.2000 3 473 3.7E-187 T 18-10-2018 CH53_1577 995b49ddc89297defe5da716a0f5766f 476 SUPERFAMILY SSF53756 3 476 1.08E-116 T 18-10-2018 CH53_1577 995b49ddc89297defe5da716a0f5766f 476 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 476 1.5E-168 T 18-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CH53_2782 428f9638c10be3ca2bb436658e397741 616 Gene3D G3DSA:3.40.50.2000 405 585 5.0E-123 T 18-10-2018 CH53_2782 428f9638c10be3ca2bb436658e397741 616 Gene3D G3DSA:3.40.50.11380 265 404 5.0E-123 T 18-10-2018 CH53_3954 b6961db78923a2193facf050fb6dc788 236 SUPERFAMILY SSF64288 90 227 1.04E-30 T 18-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CH53_3954 b6961db78923a2193facf050fb6dc788 236 Pfam PF07702 UTRA domain 88 212 7.1E-23 T 18-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CH53_3954 b6961db78923a2193facf050fb6dc788 236 SMART SM00866 83 220 2.7E-10 T 18-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CH53_3954 b6961db78923a2193facf050fb6dc788 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 66 3.7E-15 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_3954 b6961db78923a2193facf050fb6dc788 236 SMART SM00345 7 66 5.8E-11 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_3954 b6961db78923a2193facf050fb6dc788 236 Gene3D G3DSA:1.10.10.10 3 66 4.2E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3954 b6961db78923a2193facf050fb6dc788 236 Gene3D G3DSA:3.40.1410.10 79 224 6.8E-22 T 18-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CH53_3954 b6961db78923a2193facf050fb6dc788 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 4.3E-10 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_3954 b6961db78923a2193facf050fb6dc788 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 4.3E-10 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_3954 b6961db78923a2193facf050fb6dc788 236 SUPERFAMILY SSF46785 4 68 9.74E-15 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1042 dd752452dfa635883cf354d42d69d6dd 389 SUPERFAMILY SSF103473 8 387 1.57E-48 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_1042 dd752452dfa635883cf354d42d69d6dd 389 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 13 387 1.3E-159 T 18-10-2018 IPR004750 Sugar efflux GO:0005351|GO:0008643|GO:0016021 CH53_1042 dd752452dfa635883cf354d42d69d6dd 389 Gene3D G3DSA:1.20.1250.20 7 200 6.6E-21 T 18-10-2018 CH53_1042 dd752452dfa635883cf354d42d69d6dd 389 Gene3D G3DSA:1.20.1250.20 201 388 6.2E-19 T 18-10-2018 CH53_1042 dd752452dfa635883cf354d42d69d6dd 389 Pfam PF07690 Major Facilitator Superfamily 15 341 3.3E-32 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_1823 7ffec3528763d711579c50f80fb65b29 404 Pfam PF03616 Sodium/glutamate symporter 2 366 2.1E-160 T 18-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CH53_1823 7ffec3528763d711579c50f80fb65b29 404 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 397 24.736 T 18-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CH53_1823 7ffec3528763d711579c50f80fb65b29 404 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 9.7E-191 T 18-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CH53_2478 26001bac1edc06aa17d814a196599e54 302 Gene3D G3DSA:1.20.1510.10 21 219 5.2E-60 T 18-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CH53_2478 26001bac1edc06aa17d814a196599e54 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 225 299 7.5E-22 T 18-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain CH53_2478 26001bac1edc06aa17d814a196599e54 302 SUPERFAMILY SSF161111 18 220 1.83E-55 T 18-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CH53_2478 26001bac1edc06aa17d814a196599e54 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 22 300 1.8E-66 T 18-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CH53_2478 26001bac1edc06aa17d814a196599e54 302 Pfam PF01545 Cation efflux family 26 219 5.0E-45 T 18-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CH53_2478 26001bac1edc06aa17d814a196599e54 302 Gene3D G3DSA:3.30.70.1350 220 301 1.9E-20 T 18-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CH53_2478 26001bac1edc06aa17d814a196599e54 302 SUPERFAMILY SSF160240 223 301 2.75E-21 T 18-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CH53_1625 ec48329726c43a10e7c6d976480f4e8b 572 Gene3D G3DSA:2.20.25.430 281 397 0.0 T 18-10-2018 CH53_1625 ec48329726c43a10e7c6d976480f4e8b 572 Gene3D G3DSA:1.50.10.20 27 527 0.0 T 18-10-2018 CH53_1625 ec48329726c43a10e7c6d976480f4e8b 572 Pfam PF06917 Periplasmic pectate lyase 18 572 0.0 T 18-10-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 CH53_1625 ec48329726c43a10e7c6d976480f4e8b 572 Gene3D G3DSA:2.30.30.880 69 562 0.0 T 18-10-2018 CH53_1256 8ce1edaeea1e3c55956a63b0c5c51664 374 PIRSF PIRSF007313 1 366 5.3E-164 T 18-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 CH53_1256 8ce1edaeea1e3c55956a63b0c5c51664 374 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 356 1.8E-157 T 18-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 CH53_3901 c3270b0c7dd990246f73490a89ab24ea 206 SUPERFAMILY SSF55821 1 203 8.55E-66 T 18-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CH53_3901 c3270b0c7dd990246f73490a89ab24ea 206 Gene3D G3DSA:3.90.870.10 1 206 4.6E-70 T 18-10-2018 CH53_3901 c3270b0c7dd990246f73490a89ab24ea 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 4.4E-74 T 18-10-2018 IPR006070 YrdC-like domain GO:0003725 CH53_3901 c3270b0c7dd990246f73490a89ab24ea 206 Pfam PF01300 Telomere recombination 23 198 7.2E-47 T 18-10-2018 IPR006070 YrdC-like domain GO:0003725 CH53_3045 cbd31022078b8681dbe58f6cdeb3977f 373 SMART SM00558 92 215 2.2E-5 T 18-10-2018 IPR003347 JmjC domain CH53_3045 cbd31022078b8681dbe58f6cdeb3977f 373 Gene3D G3DSA:2.60.120.650 2 204 1.1E-79 T 18-10-2018 CH53_3045 cbd31022078b8681dbe58f6cdeb3977f 373 Pfam PF08007 Cupin superfamily protein 10 310 6.9E-101 T 18-10-2018 IPR003347 JmjC domain CH53_3045 cbd31022078b8681dbe58f6cdeb3977f 373 SUPERFAMILY SSF51197 6 292 2.88E-72 T 18-10-2018 CH53_3045 cbd31022078b8681dbe58f6cdeb3977f 373 Gene3D G3DSA:1.10.10.2510 205 373 3.3E-57 T 18-10-2018 CH53_2691 4491a2c839bcc08322b8bd963397b21d 123 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 37 118 3.9E-19 T 18-10-2018 IPR022204 Prepilin peptidase dependent protein C CH53_2691 4491a2c839bcc08322b8bd963397b21d 123 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site CH53_3776 51903a215cece491609444b1bcc01353 184 PIRSF PIRSF004690 1 183 1.5E-61 T 18-10-2018 IPR026269 Tat proofreading chaperone DmsD-type CH53_3776 51903a215cece491609444b1bcc01353 184 SUPERFAMILY SSF89155 2 180 2.88E-47 T 18-10-2018 IPR036411 TorD-like superfamily CH53_3776 51903a215cece491609444b1bcc01353 184 Gene3D G3DSA:1.10.3480.10 1 181 9.7E-33 T 18-10-2018 CH53_3776 51903a215cece491609444b1bcc01353 184 Pfam PF02613 Nitrate reductase delta subunit 46 147 1.0E-14 T 18-10-2018 IPR020945 DMSO/Nitrate reductase chaperone CH53_2196 be9de322a6467ed86855362b96c83328 199 Pfam PF01794 Ferric reductase like transmembrane component 48 161 1.1E-15 T 18-10-2018 IPR013130 Ferric reductase transmembrane component-like domain CH53_2196 be9de322a6467ed86855362b96c83328 199 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 5 197 21.269 T 18-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 CH53_3594 17219f2645b5427379cde915729e25f6 266 SMART SM00062 42 263 1.7E-88 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3594 17219f2645b5427379cde915729e25f6 266 Gene3D G3DSA:3.40.190.10 126 225 1.4E-72 T 18-10-2018 CH53_3594 17219f2645b5427379cde915729e25f6 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 261 8.8E-73 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3594 17219f2645b5427379cde915729e25f6 266 Gene3D G3DSA:3.40.190.10 40 260 1.4E-72 T 18-10-2018 CH53_3594 17219f2645b5427379cde915729e25f6 266 SMART SM00079 42 262 8.6E-5 T 18-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CH53_3594 17219f2645b5427379cde915729e25f6 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 18-10-2018 IPR018313 Solute-binding protein family 3, conserved site CH53_3594 17219f2645b5427379cde915729e25f6 266 SUPERFAMILY SSF53850 15 264 6.52E-78 T 18-10-2018 CH53_103 0efff650c89fa91045b947b2f2428d0e 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 109 1.0E-50 T 18-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE CH53_103 0efff650c89fa91045b947b2f2428d0e 109 SUPERFAMILY SSF69721 2 109 2.09E-41 T 18-10-2018 IPR025526 DsrC-like domain superfamily CH53_103 0efff650c89fa91045b947b2f2428d0e 109 Gene3D G3DSA:3.30.1420.10 1 37 8.9E-13 T 18-10-2018 CH53_103 0efff650c89fa91045b947b2f2428d0e 109 PIRSF PIRSF006223 2 109 5.4E-47 T 18-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE CH53_103 0efff650c89fa91045b947b2f2428d0e 109 Gene3D G3DSA:1.10.10.370 39 109 1.7E-32 T 18-10-2018 CH53_103 0efff650c89fa91045b947b2f2428d0e 109 Pfam PF04358 DsrC like protein 3 109 6.4E-46 T 18-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE CH53_2923 53e516f86c4c4b56623aa1de216a18e0 149 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 145 1.6E-22 T 18-10-2018 IPR002810 NfeD-like, C-terminal domain CH53_2923 53e516f86c4c4b56623aa1de216a18e0 149 Gene3D G3DSA:2.40.50.140 82 149 7.2E-10 T 18-10-2018 CH53_2923 53e516f86c4c4b56623aa1de216a18e0 149 SUPERFAMILY SSF141322 88 147 7.19E-6 T 18-10-2018 CH53_3190 af1d40578f676bd6b1fc0c6edf2332eb 670 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 663 0.0 T 18-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 CH53_3190 af1d40578f676bd6b1fc0c6edf2332eb 670 SMART SM00487 9 426 3.4E-29 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH53_3190 af1d40578f676bd6b1fc0c6edf2332eb 670 SUPERFAMILY SSF52540 3 415 7.07E-139 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3190 af1d40578f676bd6b1fc0c6edf2332eb 670 SUPERFAMILY SSF52540 37 580 6.07E-35 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3190 af1d40578f676bd6b1fc0c6edf2332eb 670 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.2E-18 T 18-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain CH53_3190 af1d40578f676bd6b1fc0c6edf2332eb 670 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 665 43.796 T 18-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 CH53_3190 af1d40578f676bd6b1fc0c6edf2332eb 670 Gene3D G3DSA:4.10.860.10 613 670 2.8E-22 T 18-10-2018 CH53_3190 af1d40578f676bd6b1fc0c6edf2332eb 670 Pfam PF04851 Type III restriction enzyme, res subunit 11 119 9.3E-10 T 18-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CH53_3190 af1d40578f676bd6b1fc0c6edf2332eb 670 Pfam PF00271 Helicase conserved C-terminal domain 439 544 2.7E-16 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_3190 af1d40578f676bd6b1fc0c6edf2332eb 670 SUPERFAMILY SSF46600 619 666 1.31E-12 T 18-10-2018 IPR036876 UVR domain superfamily CH53_3190 af1d40578f676bd6b1fc0c6edf2332eb 670 Gene3D G3DSA:3.40.50.300 1 240 5.1E-76 T 18-10-2018 CH53_3190 af1d40578f676bd6b1fc0c6edf2332eb 670 Gene3D G3DSA:3.40.50.300 415 596 1.3E-46 T 18-10-2018 CH53_3190 af1d40578f676bd6b1fc0c6edf2332eb 670 SMART SM00490 460 546 1.0E-18 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_3190 af1d40578f676bd6b1fc0c6edf2332eb 670 Gene3D G3DSA:3.40.50.300 275 414 2.3E-51 T 18-10-2018 CH53_3190 af1d40578f676bd6b1fc0c6edf2332eb 670 Pfam PF02151 UvrB/uvrC motif 631 665 1.4E-9 T 18-10-2018 IPR001943 UVR domain GO:0005515 CH53_133 268d72e9a5eecf42a5a47209719d1c42 396 Gene3D G3DSA:3.40.640.10 45 315 6.4E-163 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_133 268d72e9a5eecf42a5a47209719d1c42 396 Pfam PF00155 Aminotransferase class I and II 27 392 4.2E-91 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_133 268d72e9a5eecf42a5a47209719d1c42 396 Gene3D G3DSA:3.90.1150.10 11 391 6.4E-163 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_133 268d72e9a5eecf42a5a47209719d1c42 396 SUPERFAMILY SSF53383 1 396 8.01E-117 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_133 268d72e9a5eecf42a5a47209719d1c42 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.2E-39 T 18-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CH53_133 268d72e9a5eecf42a5a47209719d1c42 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.2E-39 T 18-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CH53_133 268d72e9a5eecf42a5a47209719d1c42 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.2E-39 T 18-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CH53_133 268d72e9a5eecf42a5a47209719d1c42 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.2E-39 T 18-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CH53_133 268d72e9a5eecf42a5a47209719d1c42 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 18-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CH53_2862 5306b07d11fbc6ebd70cad83d1316884 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 394 5.2E-17 T 18-10-2018 IPR019489 Clp ATPase, C-terminal CH53_2862 5306b07d11fbc6ebd70cad83d1316884 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.274 T 18-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CH53_2862 5306b07d11fbc6ebd70cad83d1316884 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 4.8E-213 T 18-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CH53_2862 5306b07d11fbc6ebd70cad83d1316884 423 SMART SM00994 12 51 1.0E-24 T 18-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CH53_2862 5306b07d11fbc6ebd70cad83d1316884 423 Gene3D G3DSA:1.10.8.60 316 423 4.9E-42 T 18-10-2018 CH53_2862 5306b07d11fbc6ebd70cad83d1316884 423 SUPERFAMILY SSF57716 13 48 5.84E-12 T 18-10-2018 CH53_2862 5306b07d11fbc6ebd70cad83d1316884 423 SMART SM01086 317 412 8.1E-34 T 18-10-2018 IPR019489 Clp ATPase, C-terminal CH53_2862 5306b07d11fbc6ebd70cad83d1316884 423 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.2E-20 T 18-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CH53_2862 5306b07d11fbc6ebd70cad83d1316884 423 SUPERFAMILY SSF52540 63 402 2.31E-71 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2862 5306b07d11fbc6ebd70cad83d1316884 423 SMART SM00382 111 302 2.8E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2862 5306b07d11fbc6ebd70cad83d1316884 423 Gene3D G3DSA:3.40.50.300 62 315 6.6E-108 T 18-10-2018 CH53_2862 5306b07d11fbc6ebd70cad83d1316884 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 2.2E-48 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CH53_2862 5306b07d11fbc6ebd70cad83d1316884 423 Gene3D G3DSA:3.30.50.30 2 52 9.3E-28 T 18-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily CH53_2326 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 18-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2326 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 18-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2326 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 18-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2326 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 18-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2326 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 6.3E-22 T 18-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2326 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 18-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2326 e0f63aa874b218a4c9d359851efe3e90 71 Gene3D G3DSA:1.20.5.1150 16 54 2.1E-21 T 18-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2326 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 18-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2326 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 18-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2326 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 18-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1309 6077192233a4b7385ac47e2ba1ea0048 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.031 T 18-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CH53_1309 6077192233a4b7385ac47e2ba1ea0048 175 SUPERFAMILY SSF50324 3 175 3.27E-67 T 18-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CH53_1309 6077192233a4b7385ac47e2ba1ea0048 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 1.6E-55 T 18-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CH53_1309 6077192233a4b7385ac47e2ba1ea0048 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 18-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CH53_1309 6077192233a4b7385ac47e2ba1ea0048 175 Gene3D G3DSA:3.90.80.10 2 175 1.1E-70 T 18-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CH53_1598 aca688812c529dab69dccc26b64d8162 501 Pfam PF00171 Aldehyde dehydrogenase family 16 480 1.5E-135 T 18-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CH53_1598 aca688812c529dab69dccc26b64d8162 501 SUPERFAMILY SSF53720 3 485 5.5E-142 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CH53_1598 aca688812c529dab69dccc26b64d8162 501 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 4 485 8.5E-200 T 18-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 CH53_1598 aca688812c529dab69dccc26b64d8162 501 Gene3D G3DSA:3.40.605.10 24 462 1.0E-146 T 18-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CH53_1598 aca688812c529dab69dccc26b64d8162 501 Gene3D G3DSA:3.40.309.10 249 454 1.0E-146 T 18-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CH53_1611 038c9bbe672d0108dfb02dd14128ec3f 680 Pfam PF01432 Peptidase family M3 222 677 2.6E-167 T 18-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CH53_1611 038c9bbe672d0108dfb02dd14128ec3f 680 Gene3D G3DSA:1.10.1370.10 140 610 2.2E-264 T 18-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CH53_1611 038c9bbe672d0108dfb02dd14128ec3f 680 SUPERFAMILY SSF55486 1 677 6.68E-213 T 18-10-2018 CH53_1611 038c9bbe672d0108dfb02dd14128ec3f 680 Gene3D G3DSA:1.10.1370.40 13 675 2.2E-264 T 18-10-2018 CH53_2749 3e16d535461f691e8df7b9a32c4c0f7a 271 PIRSF PIRSF002854 1 271 3.3E-105 T 18-10-2018 IPR004872 Lipoprotein NlpA family CH53_2749 3e16d535461f691e8df7b9a32c4c0f7a 271 Pfam PF03180 NLPA lipoprotein 33 271 1.2E-98 T 18-10-2018 IPR004872 Lipoprotein NlpA family CH53_2749 3e16d535461f691e8df7b9a32c4c0f7a 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 6.4E-146 T 18-10-2018 IPR004872 Lipoprotein NlpA family CH53_2749 3e16d535461f691e8df7b9a32c4c0f7a 271 Gene3D G3DSA:3.40.190.10 115 221 6.0E-101 T 18-10-2018 CH53_2749 3e16d535461f691e8df7b9a32c4c0f7a 271 SUPERFAMILY SSF53850 33 271 2.51E-83 T 18-10-2018 CH53_2749 3e16d535461f691e8df7b9a32c4c0f7a 271 Gene3D G3DSA:3.40.190.10 34 265 6.0E-101 T 18-10-2018 CH53_3164 52a2a5a2848d750608d44eb008fdffdf 309 Pfam PF01545 Cation efflux family 16 208 1.1E-53 T 18-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CH53_3164 52a2a5a2848d750608d44eb008fdffdf 309 SUPERFAMILY SSF160240 213 287 1.09E-10 T 18-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CH53_3164 52a2a5a2848d750608d44eb008fdffdf 309 SUPERFAMILY SSF161111 10 209 1.11E-62 T 18-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CH53_3164 52a2a5a2848d750608d44eb008fdffdf 309 Gene3D G3DSA:1.20.1510.10 12 208 6.3E-51 T 18-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CH53_3164 52a2a5a2848d750608d44eb008fdffdf 309 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 288 2.9E-97 T 18-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CH53_3265 8db24951b12c1c47c7ad5f20e03aa301 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.4E-16 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3265 8db24951b12c1c47c7ad5f20e03aa301 289 SUPERFAMILY SSF53850 85 286 1.09E-38 T 18-10-2018 CH53_3265 8db24951b12c1c47c7ad5f20e03aa301 289 Gene3D G3DSA:1.10.10.10 1 87 1.0E-21 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3265 8db24951b12c1c47c7ad5f20e03aa301 289 Pfam PF03466 LysR substrate binding domain 85 285 1.6E-40 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_3265 8db24951b12c1c47c7ad5f20e03aa301 289 Gene3D G3DSA:3.40.190.290 89 288 5.5E-35 T 18-10-2018 CH53_3265 8db24951b12c1c47c7ad5f20e03aa301 289 SUPERFAMILY SSF46785 1 109 1.52E-18 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2017 be4266998bd0f936850875439cd65b16 424 SUPERFAMILY SSF51905 1 419 3.09E-24 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2017 be4266998bd0f936850875439cd65b16 424 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 420 50.617 T 18-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CH53_2017 be4266998bd0f936850875439cd65b16 424 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 417 2.8E-178 T 18-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CH53_2017 be4266998bd0f936850875439cd65b16 424 Pfam PF00890 FAD binding domain 4 404 7.0E-60 T 18-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_2017 be4266998bd0f936850875439cd65b16 424 Gene3D G3DSA:3.50.50.60 1 109 2.1E-6 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2017 be4266998bd0f936850875439cd65b16 424 PIRSF PIRSF000141 1 423 4.0E-171 T 18-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CH53_147 e7d1dd2156b928d1389e03939687cc69 69 SMART SM00357 5 69 2.9E-28 T 18-10-2018 IPR011129 Cold shock domain GO:0003676 CH53_147 e7d1dd2156b928d1389e03939687cc69 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.1E-30 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_147 e7d1dd2156b928d1389e03939687cc69 69 PRINTS PR00050 Cold shock protein signature 6 21 7.0E-16 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_147 e7d1dd2156b928d1389e03939687cc69 69 PRINTS PR00050 Cold shock protein signature 42 60 7.0E-16 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_147 e7d1dd2156b928d1389e03939687cc69 69 PRINTS PR00050 Cold shock protein signature 27 36 7.0E-16 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_147 e7d1dd2156b928d1389e03939687cc69 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 18-10-2018 IPR019844 Cold-shock conserved site CH53_147 e7d1dd2156b928d1389e03939687cc69 69 PIRSF PIRSF002599 1 69 2.7E-24 T 18-10-2018 IPR012156 Cold shock, CspA GO:0003676 CH53_147 e7d1dd2156b928d1389e03939687cc69 69 Gene3D G3DSA:2.40.50.140 1 68 5.8E-30 T 18-10-2018 CH53_147 e7d1dd2156b928d1389e03939687cc69 69 SUPERFAMILY SSF50249 4 68 9.9E-25 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_1882 25b98d76bce6bee0dc53d7b4b401966d 165 Pfam PF07813 LTXXQ motif family protein 50 145 3.2E-21 T 18-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 CH53_1882 25b98d76bce6bee0dc53d7b4b401966d 165 PIRSF PIRSF034445 1 155 3.8E-32 T 18-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 CH53_1882 25b98d76bce6bee0dc53d7b4b401966d 165 Gene3D G3DSA:1.20.120.1490 50 159 1.7E-40 T 18-10-2018 CH53_638 37559249de88472880d7641936e012e9 292 Pfam PF14581 SseB protein C-terminal domain 167 277 1.0E-34 T 18-10-2018 IPR027945 SseB protein, C-terminal CH53_638 37559249de88472880d7641936e012e9 292 Pfam PF07179 SseB protein N-terminal domain 23 151 5.9E-30 T 18-10-2018 IPR009839 SseB protein N-terminal domain CH53_4094 8b50b86e4a409c940f6f69d53da57169 215 SMART SM00479 18 203 4.4E-40 T 18-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CH53_4094 8b50b86e4a409c940f6f69d53da57169 215 Gene3D G3DSA:3.30.420.10 9 214 1.9E-58 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CH53_4094 8b50b86e4a409c940f6f69d53da57169 215 Hamap MF_00157 Ribonuclease T [rnt]. 1 215 117.314 T 18-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CH53_4094 8b50b86e4a409c940f6f69d53da57169 215 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 3.2E-106 T 18-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CH53_4094 8b50b86e4a409c940f6f69d53da57169 215 SUPERFAMILY SSF53098 9 207 6.07E-58 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_4094 8b50b86e4a409c940f6f69d53da57169 215 Pfam PF00929 Exonuclease 20 194 7.0E-38 T 18-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CH53_2041 a7a762f491ea37171d332692241448d7 225 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 136 1.7E-5 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_2041 a7a762f491ea37171d332692241448d7 225 Gene3D G3DSA:2.60.40.10 23 152 1.1E-28 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2041 a7a762f491ea37171d332692241448d7 225 SUPERFAMILY SSF49354 20 136 2.59E-9 T 18-10-2018 IPR008962 PapD-like superfamily CH53_2125 69acb28b6658d0d5454b126054ea5503 440 TIGRFAM TIGR00366 TIGR00366: TIGR00366 family protein 4 428 1.7E-215 T 18-10-2018 IPR006161 Conserved hypothetical protein CHP00336 CH53_2125 69acb28b6658d0d5454b126054ea5503 440 Pfam PF02667 Short chain fatty acid transporter 1 440 2.4E-220 T 18-10-2018 IPR006160 Short chain fatty acid transporter AtoE CH53_1824 0a83ed289b33728f788da5916e148cd3 693 Gene3D G3DSA:2.40.50.140 47 141 3.5E-14 T 18-10-2018 CH53_1824 0a83ed289b33728f788da5916e148cd3 693 SUPERFAMILY SSF52540 208 453 2.26E-58 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1824 0a83ed289b33728f788da5916e148cd3 693 Pfam PF00270 DEAD/DEAH box helicase 272 431 8.5E-19 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CH53_1824 0a83ed289b33728f788da5916e148cd3 693 SUPERFAMILY SSF50249 9 176 1.37E-42 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_1824 0a83ed289b33728f788da5916e148cd3 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 3.2E-242 T 18-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 CH53_1824 0a83ed289b33728f788da5916e148cd3 693 SMART SM00490 505 589 2.0E-21 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_1824 0a83ed289b33728f788da5916e148cd3 693 Pfam PF17191 RecG wedge domain 14 172 5.3E-22 T 18-10-2018 IPR033454 RecG, wedge domain CH53_1824 0a83ed289b33728f788da5916e148cd3 693 SMART SM00487 265 459 2.2E-29 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH53_1824 0a83ed289b33728f788da5916e148cd3 693 SUPERFAMILY SSF52540 292 653 8.29E-44 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1824 0a83ed289b33728f788da5916e148cd3 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 2.6E-16 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_1824 0a83ed289b33728f788da5916e148cd3 693 Gene3D G3DSA:3.40.50.300 457 630 4.3E-50 T 18-10-2018 CH53_1824 0a83ed289b33728f788da5916e148cd3 693 Gene3D G3DSA:3.40.50.300 208 450 2.4E-81 T 18-10-2018 CH53_2848 f4729c728e47d2a6f8f747d2ff50b186 303 SUPERFAMILY SSF48179 168 289 6.12E-34 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_2848 f4729c728e47d2a6f8f747d2ff50b186 303 SUPERFAMILY SSF51735 1 167 1.23E-59 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2848 f4729c728e47d2a6f8f747d2ff50b186 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 6.1E-82 T 18-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 CH53_2848 f4729c728e47d2a6f8f747d2ff50b186 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 1.1E-23 T 18-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain CH53_2848 f4729c728e47d2a6f8f747d2ff50b186 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 2.6E-33 T 18-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain CH53_2848 f4729c728e47d2a6f8f747d2ff50b186 303 Gene3D G3DSA:3.40.50.720 1 167 4.6E-54 T 18-10-2018 CH53_2848 f4729c728e47d2a6f8f747d2ff50b186 303 Gene3D G3DSA:1.10.1040.10 168 290 6.3E-43 T 18-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CH53_3078 9c950ceba2a22e511565e5a8307336d6 515 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 496 24.358 T 18-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CH53_3078 9c950ceba2a22e511565e5a8307336d6 515 SUPERFAMILY SSF56317 216 491 4.19E-37 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CH53_3078 9c950ceba2a22e511565e5a8307336d6 515 Gene3D G3DSA:3.60.110.10 217 479 3.6E-8 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CH53_3078 9c950ceba2a22e511565e5a8307336d6 515 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 458 6.3E-104 T 18-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CH53_3078 9c950ceba2a22e511565e5a8307336d6 515 Pfam PF00795 Carbon-nitrogen hydrolase 224 476 1.7E-34 T 18-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CH53_2779 d79a0323042b03b1beafcec1efcc0723 399 Pfam PF01636 Phosphotransferase enzyme family 33 263 1.9E-13 T 18-10-2018 IPR002575 Aminoglycoside phosphotransferase CH53_2779 d79a0323042b03b1beafcec1efcc0723 399 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 399 209.606 T 18-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 CH53_2779 d79a0323042b03b1beafcec1efcc0723 399 Gene3D G3DSA:3.30.200.20 1 115 6.5E-38 T 18-10-2018 CH53_2779 d79a0323042b03b1beafcec1efcc0723 399 PIRSF PIRSF031134 1 399 2.0E-164 T 18-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 CH53_2779 d79a0323042b03b1beafcec1efcc0723 399 Gene3D G3DSA:3.90.1200.10 116 398 1.7E-101 T 18-10-2018 CH53_2779 d79a0323042b03b1beafcec1efcc0723 399 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 33 396 2.3E-159 T 18-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 CH53_2779 d79a0323042b03b1beafcec1efcc0723 399 SUPERFAMILY SSF56112 1 397 1.12E-88 T 18-10-2018 IPR011009 Protein kinase-like domain superfamily CH53_575 544d2924fd98b9d6a5397c146e46f490 352 PIRSF PIRSF026343 9 346 2.5E-110 T 18-10-2018 IPR014524 Outer membrane protein assembly factor BamC CH53_575 544d2924fd98b9d6a5397c146e46f490 352 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 344 38.43 T 18-10-2018 IPR014524 Outer membrane protein assembly factor BamC CH53_575 544d2924fd98b9d6a5397c146e46f490 352 Gene3D G3DSA:3.30.530.50 101 213 1.4E-44 T 18-10-2018 CH53_575 544d2924fd98b9d6a5397c146e46f490 352 Gene3D G3DSA:3.30.310.170 227 351 3.1E-48 T 18-10-2018 CH53_575 544d2924fd98b9d6a5397c146e46f490 352 Pfam PF06804 NlpB/DapX lipoprotein 40 343 2.8E-110 T 18-10-2018 IPR010653 NlpB/DapX lipoprotein CH53_639 d8206bfb9a31eb7c637e4d299dd5c66c 432 PIRSF PIRSF036388 2 432 9.7E-238 T 18-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CH53_639 d8206bfb9a31eb7c637e4d299dd5c66c 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 110 422 2.7E-106 T 18-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CH53_639 d8206bfb9a31eb7c637e4d299dd5c66c 432 SUPERFAMILY SSF53187 108 427 1.16E-103 T 18-10-2018 CH53_639 d8206bfb9a31eb7c637e4d299dd5c66c 432 Pfam PF12404 Peptidase 6 82 1.9E-34 T 18-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CH53_639 d8206bfb9a31eb7c637e4d299dd5c66c 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 1.5E-47 T 18-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CH53_639 d8206bfb9a31eb7c637e4d299dd5c66c 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 1.5E-47 T 18-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CH53_639 d8206bfb9a31eb7c637e4d299dd5c66c 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 1.5E-47 T 18-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CH53_639 d8206bfb9a31eb7c637e4d299dd5c66c 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 1.5E-47 T 18-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CH53_639 d8206bfb9a31eb7c637e4d299dd5c66c 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 1.5E-47 T 18-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CH53_639 d8206bfb9a31eb7c637e4d299dd5c66c 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 18-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CH53_639 d8206bfb9a31eb7c637e4d299dd5c66c 432 Hamap MF_00504 Peptidase B [pepB]. 4 428 69.324 T 18-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CH53_639 d8206bfb9a31eb7c637e4d299dd5c66c 432 Gene3D G3DSA:3.40.630.10 94 431 7.1E-108 T 18-10-2018 CH53_310 890605ba686c5257fffbb461f54b35bb 148 TIGRFAM TIGR01501 MthylAspMutase: methylaspartate mutase, S subunit 4 135 6.3E-66 T 18-10-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CH53_310 890605ba686c5257fffbb461f54b35bb 148 SUPERFAMILY SSF52242 3 134 5.49E-32 T 18-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 CH53_310 890605ba686c5257fffbb461f54b35bb 148 Hamap MF_00526 Glutamate mutase sigma subunit [glmS]. 1 137 35.575 T 18-10-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CH53_310 890605ba686c5257fffbb461f54b35bb 148 Pfam PF02310 B12 binding domain 5 95 2.8E-11 T 18-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CH53_310 890605ba686c5257fffbb461f54b35bb 148 Gene3D G3DSA:3.40.50.280 1 146 1.9E-32 T 18-10-2018 CH53_4121 71c1ef91159dac708adc276378781a52 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 272 73.088 T 18-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein CH53_4121 71c1ef91159dac708adc276378781a52 273 SUPERFAMILY SSF47454 173 230 5.49E-5 T 18-10-2018 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily GO:0003677|GO:0006355 CH53_4121 71c1ef91159dac708adc276378781a52 273 Pfam PF03618 Kinase/pyrophosphorylase 5 263 3.7E-73 T 18-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CH53_2250 7dde764f8d82823e34dacf7ea4f63839 340 SUPERFAMILY SSF53697 24 335 1.56E-66 T 18-10-2018 CH53_2250 7dde764f8d82823e34dacf7ea4f63839 340 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 62 330 1.0E-123 T 18-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CH53_2250 7dde764f8d82823e34dacf7ea4f63839 340 PIRSF PIRSF004692 7 340 1.3E-133 T 18-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CH53_2250 7dde764f8d82823e34dacf7ea4f63839 340 Pfam PF01380 SIS domain 59 189 4.8E-31 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_2250 7dde764f8d82823e34dacf7ea4f63839 340 Gene3D G3DSA:3.10.580.10 213 337 1.1E-44 T 18-10-2018 CH53_2250 7dde764f8d82823e34dacf7ea4f63839 340 Gene3D G3DSA:3.40.50.10490 21 212 9.0E-65 T 18-10-2018 CH53_2250 7dde764f8d82823e34dacf7ea4f63839 340 Pfam PF00571 CBS domain 286 337 3.8E-6 T 18-10-2018 IPR000644 CBS domain CH53_2250 7dde764f8d82823e34dacf7ea4f63839 340 Pfam PF00571 CBS domain 218 273 6.1E-5 T 18-10-2018 IPR000644 CBS domain CH53_4346 6f2d6fa7c3b2c8713d4f71ec6fe60a67 460 Pfam PF00271 Helicase conserved C-terminal domain 235 337 1.4E-27 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_4346 6f2d6fa7c3b2c8713d4f71ec6fe60a67 460 Pfam PF03880 DbpA RNA binding domain 387 455 6.6E-23 T 18-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CH53_4346 6f2d6fa7c3b2c8713d4f71ec6fe60a67 460 SMART SM00490 256 337 5.1E-30 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_4346 6f2d6fa7c3b2c8713d4f71ec6fe60a67 460 Gene3D G3DSA:3.40.50.300 4 210 2.5E-68 T 18-10-2018 CH53_4346 6f2d6fa7c3b2c8713d4f71ec6fe60a67 460 Pfam PF00270 DEAD/DEAH box helicase 28 191 1.1E-43 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CH53_4346 6f2d6fa7c3b2c8713d4f71ec6fe60a67 460 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 6 460 72.072 T 18-10-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 CH53_4346 6f2d6fa7c3b2c8713d4f71ec6fe60a67 460 SMART SM00487 23 220 1.2E-56 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH53_4346 6f2d6fa7c3b2c8713d4f71ec6fe60a67 460 Gene3D G3DSA:3.40.50.300 217 387 4.3E-48 T 18-10-2018 CH53_4346 6f2d6fa7c3b2c8713d4f71ec6fe60a67 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 18-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CH53_4346 6f2d6fa7c3b2c8713d4f71ec6fe60a67 460 Gene3D G3DSA:3.30.70.330 388 458 1.5E-20 T 18-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CH53_4346 6f2d6fa7c3b2c8713d4f71ec6fe60a67 460 SUPERFAMILY SSF52540 74 358 4.63E-71 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2845 74b02e9b1a80d92fedb8df8e182502eb 84 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 16.198 T 18-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CH53_2845 74b02e9b1a80d92fedb8df8e182502eb 84 Gene3D G3DSA:1.10.287.1040 9 84 3.0E-25 T 18-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 CH53_2845 74b02e9b1a80d92fedb8df8e182502eb 84 Pfam PF02609 Exonuclease VII small subunit 15 65 3.2E-20 T 18-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CH53_2845 74b02e9b1a80d92fedb8df8e182502eb 84 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 14 69 7.8E-23 T 18-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CH53_2845 74b02e9b1a80d92fedb8df8e182502eb 84 SUPERFAMILY SSF116842 8 75 3.53E-21 T 18-10-2018 CH53_2845 74b02e9b1a80d92fedb8df8e182502eb 84 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 14 56 2.0E-16 T 18-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CH53_2845 74b02e9b1a80d92fedb8df8e182502eb 84 PIRSF PIRSF006488 3 84 1.9E-25 T 18-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CH53_2456 b08e0d8a653ea7b88fe7b41c9daae927 290 SUPERFAMILY SSF46894 18 102 2.44E-13 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_2456 b08e0d8a653ea7b88fe7b41c9daae927 290 SMART SM00862 25 102 2.2E-9 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_2456 b08e0d8a653ea7b88fe7b41c9daae927 290 Gene3D G3DSA:1.10.10.10 7 103 3.5E-13 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2456 b08e0d8a653ea7b88fe7b41c9daae927 290 Pfam PF00486 Transcriptional regulatory protein, C terminal 28 102 2.5E-10 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_1110 4c0040647d01514e7a0a594e38acff18 424 SMART SM00530 6 62 4.3E-6 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_1110 4c0040647d01514e7a0a594e38acff18 424 SUPERFAMILY SSF52540 232 404 4.47E-27 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1110 4c0040647d01514e7a0a594e38acff18 424 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 5.8E-20 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CH53_1110 4c0040647d01514e7a0a594e38acff18 424 SUPERFAMILY SSF47413 5 59 7.7E-9 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_1110 4c0040647d01514e7a0a594e38acff18 424 SUPERFAMILY SSF52374 65 229 5.38E-20 T 18-10-2018 CH53_1110 4c0040647d01514e7a0a594e38acff18 424 Gene3D G3DSA:3.40.50.300 231 399 5.5E-58 T 18-10-2018 CH53_1110 4c0040647d01514e7a0a594e38acff18 424 Pfam PF13521 AAA domain 234 394 2.6E-33 T 18-10-2018 IPR038727 NadR/Ttd14, AAA domain CH53_1110 4c0040647d01514e7a0a594e38acff18 424 Gene3D G3DSA:3.40.50.620 63 230 1.9E-44 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_1110 4c0040647d01514e7a0a594e38acff18 424 Gene3D G3DSA:1.10.260.40 5 60 1.5E-5 T 18-10-2018 CH53_1110 4c0040647d01514e7a0a594e38acff18 424 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 6.2E-155 T 18-10-2018 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0000309|GO:0009435 KEGG: 00760+2.7.7.1+2.7.1.22 CH53_1110 4c0040647d01514e7a0a594e38acff18 424 PIRSF PIRSF004776 2 415 3.9E-218 T 18-10-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 CH53_1110 4c0040647d01514e7a0a594e38acff18 424 Pfam PF01381 Helix-turn-helix 7 58 1.5E-5 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_2531 9a8516f983d04dc09fe0590e726bdcc0 62 Gene3D G3DSA:1.10.10.60 7 61 4.9E-10 T 18-10-2018 CH53_2531 9a8516f983d04dc09fe0590e726bdcc0 62 Pfam PF01527 Transposase 4 48 2.9E-15 T 18-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CH53_2531 9a8516f983d04dc09fe0590e726bdcc0 62 SUPERFAMILY SSF46689 1 50 1.49E-13 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3186 6b1c1d356a637f93692d184def8323eb 260 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 21 259 2.7E-66 T 18-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 CH53_3186 6b1c1d356a637f93692d184def8323eb 260 Gene3D G3DSA:3.40.50.150 20 212 9.1E-35 T 18-10-2018 CH53_3186 6b1c1d356a637f93692d184def8323eb 260 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 13 259 29.872 T 18-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 CH53_3186 6b1c1d356a637f93692d184def8323eb 260 SUPERFAMILY SSF53335 19 253 1.67E-36 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_3186 6b1c1d356a637f93692d184def8323eb 260 Pfam PF08241 Methyltransferase domain 56 147 1.0E-22 T 18-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CH53_4349 0e514cd01a302ab9776ea08a2cd2a298 461 Gene3D G3DSA:3.60.120.10 2 454 1.3E-172 T 18-10-2018 IPR005801 ADC synthase GO:0009058 CH53_4349 0e514cd01a302ab9776ea08a2cd2a298 461 Pfam PF00425 chorismate binding enzyme 190 444 2.6E-92 T 18-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CH53_4349 0e514cd01a302ab9776ea08a2cd2a298 461 PRINTS PR00095 Anthranilate synthase component I signature 306 319 1.9E-16 T 18-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CH53_4349 0e514cd01a302ab9776ea08a2cd2a298 461 PRINTS PR00095 Anthranilate synthase component I signature 386 400 1.9E-16 T 18-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CH53_4349 0e514cd01a302ab9776ea08a2cd2a298 461 PRINTS PR00095 Anthranilate synthase component I signature 292 305 1.9E-16 T 18-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CH53_4349 0e514cd01a302ab9776ea08a2cd2a298 461 PRINTS PR00095 Anthranilate synthase component I signature 401 415 1.9E-16 T 18-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CH53_4349 0e514cd01a302ab9776ea08a2cd2a298 461 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 154 1.7E-27 T 18-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CH53_4349 0e514cd01a302ab9776ea08a2cd2a298 461 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 107 447 4.5E-128 T 18-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 CH53_4349 0e514cd01a302ab9776ea08a2cd2a298 461 SUPERFAMILY SSF56322 7 452 3.79E-145 T 18-10-2018 IPR005801 ADC synthase GO:0009058 CH53_2624 0c5eabffa1f34217203542c742664d29 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 184 0.0026 T 18-10-2018 CH53_2624 0c5eabffa1f34217203542c742664d29 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 248 5.3E-57 T 18-10-2018 CH53_2624 0c5eabffa1f34217203542c742664d29 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 8.4E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2624 0c5eabffa1f34217203542c742664d29 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 8.4E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2624 0c5eabffa1f34217203542c742664d29 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 8.4E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2624 0c5eabffa1f34217203542c742664d29 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 8.4E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2624 0c5eabffa1f34217203542c742664d29 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 8.4E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2624 0c5eabffa1f34217203542c742664d29 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 8.4E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2624 0c5eabffa1f34217203542c742664d29 249 Gene3D G3DSA:3.40.50.720 1 248 5.3E-80 T 18-10-2018 CH53_2624 0c5eabffa1f34217203542c742664d29 249 SUPERFAMILY SSF51735 2 248 3.64E-75 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2624 0c5eabffa1f34217203542c742664d29 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CH53_2624 0c5eabffa1f34217203542c742664d29 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.0E-10 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2624 0c5eabffa1f34217203542c742664d29 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 2.0E-10 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2624 0c5eabffa1f34217203542c742664d29 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.0E-10 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_1834 9eec8cc95fc1bfda1dc78ebb7783095b 664 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 114 232 3.9E-11 T 18-10-2018 IPR000014 PAS domain CH53_1834 9eec8cc95fc1bfda1dc78ebb7783095b 664 SMART SM00267 225 394 1.2E-59 T 18-10-2018 IPR000160 GGDEF domain CH53_1834 9eec8cc95fc1bfda1dc78ebb7783095b 664 SUPERFAMILY SSF55785 123 233 2.09E-13 T 18-10-2018 IPR035965 PAS domain superfamily CH53_1834 9eec8cc95fc1bfda1dc78ebb7783095b 664 Pfam PF00563 EAL domain 411 644 7.3E-65 T 18-10-2018 IPR001633 EAL domain CH53_1834 9eec8cc95fc1bfda1dc78ebb7783095b 664 Gene3D G3DSA:3.30.70.270 233 406 2.6E-56 T 18-10-2018 CH53_1834 9eec8cc95fc1bfda1dc78ebb7783095b 664 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 389 2.8E-44 T 18-10-2018 IPR000160 GGDEF domain CH53_1834 9eec8cc95fc1bfda1dc78ebb7783095b 664 Pfam PF13426 PAS domain 122 224 7.4E-8 T 18-10-2018 IPR000014 PAS domain CH53_1834 9eec8cc95fc1bfda1dc78ebb7783095b 664 SMART SM00052 404 649 4.0E-112 T 18-10-2018 IPR001633 EAL domain CH53_1834 9eec8cc95fc1bfda1dc78ebb7783095b 664 SUPERFAMILY SSF141868 411 656 6.67E-84 T 18-10-2018 IPR035919 EAL domain superfamily CH53_1834 9eec8cc95fc1bfda1dc78ebb7783095b 664 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 392 1.1E-37 T 18-10-2018 IPR000160 GGDEF domain CH53_1834 9eec8cc95fc1bfda1dc78ebb7783095b 664 SMART SM00091 110 176 2.4E-4 T 18-10-2018 IPR000014 PAS domain CH53_1834 9eec8cc95fc1bfda1dc78ebb7783095b 664 Gene3D G3DSA:3.30.450.20 116 232 1.8E-13 T 18-10-2018 CH53_1834 9eec8cc95fc1bfda1dc78ebb7783095b 664 SUPERFAMILY SSF55073 242 396 1.02E-44 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_1834 9eec8cc95fc1bfda1dc78ebb7783095b 664 Gene3D G3DSA:3.20.20.450 407 660 2.5E-89 T 18-10-2018 IPR035919 EAL domain superfamily CH53_2597 fc7a423e2179b35ce5ddb7358681c8b0 98 SMART SM00418 10 88 3.5E-26 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_2597 fc7a423e2179b35ce5ddb7358681c8b0 98 SUPERFAMILY SSF46785 7 92 1.07E-24 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2597 fc7a423e2179b35ce5ddb7358681c8b0 98 Gene3D G3DSA:1.10.10.10 1 97 2.0E-25 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2597 fc7a423e2179b35ce5ddb7358681c8b0 98 Pfam PF01022 Bacterial regulatory protein, arsR family 18 63 2.9E-13 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_2597 fc7a423e2179b35ce5ddb7358681c8b0 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 3.6E-11 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_2597 fc7a423e2179b35ce5ddb7358681c8b0 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 3.6E-11 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_2597 fc7a423e2179b35ce5ddb7358681c8b0 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 3.6E-11 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_2001 38c401bed3e91e36a86f877f4603aa64 216 Gene3D G3DSA:1.10.357.10 10 175 4.6E-14 T 18-10-2018 CH53_2001 38c401bed3e91e36a86f877f4603aa64 216 Pfam PF02796 Helix-turn-helix domain of resolvase 26 61 1.2E-5 T 18-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CH53_2001 38c401bed3e91e36a86f877f4603aa64 216 SUPERFAMILY SSF46689 19 80 1.89E-9 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1229 51f13a919b7c984028ca444c843fc000 438 Pfam PF04917 Bacterial shufflon protein, N-terminal constant region 49 360 1.1E-14 T 18-10-2018 IPR007001 Bacterial shufflon protein, N-terminal CH53_1893 5c50afa68459472ff14909838fe48640 394 SUPERFAMILY SSF103473 7 390 2.75E-58 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_1893 5c50afa68459472ff14909838fe48640 394 Pfam PF07690 Major Facilitator Superfamily 14 350 1.2E-37 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_1893 5c50afa68459472ff14909838fe48640 394 Gene3D G3DSA:1.20.1720.10 9 383 7.5E-121 T 18-10-2018 CH53_1017 d45b0894eb4047f3910f4994913c51c9 491 SUPERFAMILY SSF53244 323 477 1.68E-46 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CH53_1017 d45b0894eb4047f3910f4994913c51c9 491 Pfam PF01225 Mur ligase family, catalytic domain 21 118 3.6E-29 T 18-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CH53_1017 d45b0894eb4047f3910f4994913c51c9 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 418 3.6E-21 T 18-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CH53_1017 d45b0894eb4047f3910f4994913c51c9 491 Gene3D G3DSA:3.90.190.20 325 491 3.8E-52 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CH53_1017 d45b0894eb4047f3910f4994913c51c9 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 2.0E-183 T 18-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_1017 d45b0894eb4047f3910f4994913c51c9 491 Pfam PF08245 Mur ligase middle domain 124 304 2.9E-27 T 18-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CH53_1017 d45b0894eb4047f3910f4994913c51c9 491 SUPERFAMILY SSF51984 20 106 2.88E-29 T 18-10-2018 CH53_1017 d45b0894eb4047f3910f4994913c51c9 491 Gene3D G3DSA:3.40.1190.10 108 324 7.7E-87 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CH53_1017 d45b0894eb4047f3910f4994913c51c9 491 Gene3D G3DSA:3.40.50.720 20 107 4.0E-34 T 18-10-2018 CH53_1017 d45b0894eb4047f3910f4994913c51c9 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.662 T 18-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_1017 d45b0894eb4047f3910f4994913c51c9 491 SUPERFAMILY SSF53623 105 322 1.31E-73 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CH53_1508 564f9cc5fa66a2a44452070cd68b402e 289 Gene3D G3DSA:3.60.130.10 1 283 2.7E-99 T 18-10-2018 CH53_1508 564f9cc5fa66a2a44452070cd68b402e 289 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 272 3.1E-67 T 18-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 CH53_1508 564f9cc5fa66a2a44452070cd68b402e 289 SUPERFAMILY SSF51197 7 281 3.3E-96 T 18-10-2018 CH53_3909 6d9c2617aab40d7f43998221de1f8729 324 SUPERFAMILY SSF53850 91 322 1.6E-43 T 18-10-2018 CH53_3909 6d9c2617aab40d7f43998221de1f8729 324 Pfam PF03466 LysR substrate binding domain 92 288 9.0E-41 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_3909 6d9c2617aab40d7f43998221de1f8729 324 Gene3D G3DSA:1.10.10.10 1 86 1.1E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3909 6d9c2617aab40d7f43998221de1f8729 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3909 6d9c2617aab40d7f43998221de1f8729 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3909 6d9c2617aab40d7f43998221de1f8729 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3909 6d9c2617aab40d7f43998221de1f8729 324 Gene3D G3DSA:3.40.190.10 167 267 1.1E-99 T 18-10-2018 CH53_3909 6d9c2617aab40d7f43998221de1f8729 324 SUPERFAMILY SSF46785 1 85 7.39E-13 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3909 6d9c2617aab40d7f43998221de1f8729 324 Gene3D G3DSA:3.40.190.10 92 303 1.1E-99 T 18-10-2018 CH53_3909 6d9c2617aab40d7f43998221de1f8729 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.4E-14 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1262 199f9a7a70a890052bb01da384cd9b8c 209 Gene3D G3DSA:3.40.50.720 1 209 1.7E-50 T 18-10-2018 CH53_1262 199f9a7a70a890052bb01da384cd9b8c 209 SUPERFAMILY SSF51735 1 199 7.91E-37 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1262 199f9a7a70a890052bb01da384cd9b8c 209 SMART SM00859 3 95 0.0013 T 18-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 PIRSF PIRSF000770 3 240 2.0E-40 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 Pfam PF04539 Sigma-70 region 3 97 163 5.1E-14 T 18-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 1.3E-84 T 18-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 Gene3D G3DSA:1.10.1740.10 4 85 4.1E-27 T 18-10-2018 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 62.55 T 18-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 Pfam PF04542 Sigma-70 region 2 16 88 2.2E-16 T 18-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 Gene3D G3DSA:1.20.140.160 87 239 7.6E-46 T 18-10-2018 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 9.4E-33 T 18-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 Pfam PF04545 Sigma-70, region 4 185 234 2.7E-17 T 18-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 SUPERFAMILY SSF88946 5 88 1.88E-23 T 18-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 PRINTS PR00046 Major sigma-70 factor signature 221 232 1.6E-13 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 PRINTS PR00046 Major sigma-70 factor signature 43 56 1.6E-13 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 PRINTS PR00046 Major sigma-70 factor signature 67 75 1.6E-13 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 PRINTS PR00046 Major sigma-70 factor signature 189 201 1.6E-13 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 PRINTS PR00046 Major sigma-70 factor signature 206 221 1.6E-13 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 SUPERFAMILY SSF88659 150 238 1.68E-21 T 18-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CH53_3591 071d6d2ac11bec34414014e2d97ffd86 240 SUPERFAMILY SSF88659 90 162 5.67E-15 T 18-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CH53_2607 fb5323542b3d3a9d07f6642329a70ce8 358 Gene3D G3DSA:3.20.20.70 2 358 9.3E-152 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2607 fb5323542b3d3a9d07f6642329a70ce8 358 SUPERFAMILY SSF51569 4 355 2.05E-130 T 18-10-2018 CH53_2607 fb5323542b3d3a9d07f6642329a70ce8 358 PIRSF PIRSF001359 13 358 3.9E-102 T 18-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CH53_2607 fb5323542b3d3a9d07f6642329a70ce8 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 18-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CH53_2607 fb5323542b3d3a9d07f6642329a70ce8 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 18-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CH53_2607 fb5323542b3d3a9d07f6642329a70ce8 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 8.2E-188 T 18-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 CH53_2607 fb5323542b3d3a9d07f6642329a70ce8 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 1.3E-89 T 18-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CH53_2607 fb5323542b3d3a9d07f6642329a70ce8 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 8.8E-115 T 18-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CH53_3714 10b3005046e870799e070027a59b1a37 208 SUPERFAMILY SSF55186 84 204 1.96E-22 T 18-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CH53_3714 10b3005046e870799e070027a59b1a37 208 SUPERFAMILY SSF50447 1 79 4.59E-14 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CH53_3714 10b3005046e870799e070027a59b1a37 208 Gene3D G3DSA:2.40.30.130 1 79 8.2E-18 T 18-10-2018 CH53_3714 10b3005046e870799e070027a59b1a37 208 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 198 3.7E-5 T 18-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CH53_3714 10b3005046e870799e070027a59b1a37 208 Gene3D G3DSA:3.30.980.10 84 208 4.7E-12 T 18-10-2018 CH53_3551 39e67b165ad93bb31ed1924fe4361d7e 137 Pfam PF00460 Flagella basal body rod protein 9 39 3.1E-12 T 18-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CH53_3551 39e67b165ad93bb31ed1924fe4361d7e 137 PIRSF PIRSF002889 1 137 1.3E-41 T 18-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CH53_3551 39e67b165ad93bb31ed1924fe4361d7e 137 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 6.2E-42 T 18-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CH53_3551 39e67b165ad93bb31ed1924fe4361d7e 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 18-10-2018 IPR019776 Flagellar basal body rod protein, conserved site CH53_164 a34851b1109cc6b41cabf0bccd40fa31 430 SUPERFAMILY SSF55681 116 424 6.63E-100 T 18-10-2018 CH53_164 a34851b1109cc6b41cabf0bccd40fa31 430 PIRSF PIRSF001529 1 430 1.5E-181 T 18-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CH53_164 a34851b1109cc6b41cabf0bccd40fa31 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 406 1.4E-34 T 18-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_164 a34851b1109cc6b41cabf0bccd40fa31 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.0E-28 T 18-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 CH53_164 a34851b1109cc6b41cabf0bccd40fa31 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 41.477 T 18-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CH53_164 a34851b1109cc6b41cabf0bccd40fa31 430 Gene3D G3DSA:3.30.930.10 105 430 2.2E-115 T 18-10-2018 CH53_164 a34851b1109cc6b41cabf0bccd40fa31 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 4.2E-179 T 18-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CH53_164 a34851b1109cc6b41cabf0bccd40fa31 430 SUPERFAMILY SSF46589 1 112 2.41E-29 T 18-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CH53_164 a34851b1109cc6b41cabf0bccd40fa31 430 Gene3D G3DSA:1.10.287.40 1 104 1.0E-17 T 18-10-2018 CH53_164 a34851b1109cc6b41cabf0bccd40fa31 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 8.3E-34 T 18-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CH53_164 a34851b1109cc6b41cabf0bccd40fa31 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 8.3E-34 T 18-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CH53_164 a34851b1109cc6b41cabf0bccd40fa31 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 8.3E-34 T 18-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CH53_164 a34851b1109cc6b41cabf0bccd40fa31 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 8.3E-34 T 18-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CH53_164 a34851b1109cc6b41cabf0bccd40fa31 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 8.3E-34 T 18-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CH53_1268 ab5ef58a86229c0b86f0f16e4fb11815 97 Pfam PF01541 GIY-YIG catalytic domain 6 77 2.9E-11 T 18-10-2018 IPR000305 GIY-YIG endonuclease CH53_1268 ab5ef58a86229c0b86f0f16e4fb11815 97 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 3 95 31.935 T 18-10-2018 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease CH53_1268 ab5ef58a86229c0b86f0f16e4fb11815 97 Gene3D G3DSA:3.40.1440.10 2 95 1.4E-26 T 18-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CH53_1268 ab5ef58a86229c0b86f0f16e4fb11815 97 SUPERFAMILY SSF82771 5 76 1.44E-11 T 18-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CH53_3560 954f0e8ceac8baebb38ebf32b75a0aa5 555 SUPERFAMILY SSF64518 98 553 4.58E-48 T 18-10-2018 CH53_3560 954f0e8ceac8baebb38ebf32b75a0aa5 555 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 345 2.7E-74 T 18-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CH53_3560 954f0e8ceac8baebb38ebf32b75a0aa5 555 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 497 553 9.5E-7 T 18-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH53_3560 954f0e8ceac8baebb38ebf32b75a0aa5 555 PRINTS PR01005 Flagellar hook-associated protein signature 473 494 8.4E-82 T 18-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CH53_3560 954f0e8ceac8baebb38ebf32b75a0aa5 555 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 8.4E-82 T 18-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CH53_3560 954f0e8ceac8baebb38ebf32b75a0aa5 555 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 8.4E-82 T 18-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CH53_3560 954f0e8ceac8baebb38ebf32b75a0aa5 555 PRINTS PR01005 Flagellar hook-associated protein signature 448 467 8.4E-82 T 18-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CH53_3560 954f0e8ceac8baebb38ebf32b75a0aa5 555 PRINTS PR01005 Flagellar hook-associated protein signature 520 544 8.4E-82 T 18-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CH53_3560 954f0e8ceac8baebb38ebf32b75a0aa5 555 PRINTS PR01005 Flagellar hook-associated protein signature 124 144 8.4E-82 T 18-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CH53_3560 954f0e8ceac8baebb38ebf32b75a0aa5 555 PRINTS PR01005 Flagellar hook-associated protein signature 260 282 8.4E-82 T 18-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CH53_3560 954f0e8ceac8baebb38ebf32b75a0aa5 555 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 8.4E-82 T 18-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CH53_3560 954f0e8ceac8baebb38ebf32b75a0aa5 555 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 8.4E-82 T 18-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CH53_3560 954f0e8ceac8baebb38ebf32b75a0aa5 555 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 8.4E-82 T 18-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CH53_3560 954f0e8ceac8baebb38ebf32b75a0aa5 555 Pfam PF00460 Flagella basal body rod protein 6 35 8.6E-6 T 18-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CH53_1105 5ba9ccc01d9ad683d87e31706a051679 274 TIGRFAM TIGR02624 rhamnu_1P_ald: rhamnulose-1-phosphate aldolase 1 272 2.5E-139 T 18-10-2018 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 CH53_1105 5ba9ccc01d9ad683d87e31706a051679 274 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 238 8.7E-38 T 18-10-2018 IPR001303 Class II aldolase/adducin N-terminal CH53_1105 5ba9ccc01d9ad683d87e31706a051679 274 SMART SM01007 11 239 1.6E-35 T 18-10-2018 IPR001303 Class II aldolase/adducin N-terminal CH53_1105 5ba9ccc01d9ad683d87e31706a051679 274 Hamap MF_00770 Rhamnulose-1-phosphate aldolase [rhaD]. 1 272 57.592 T 18-10-2018 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 CH53_1105 5ba9ccc01d9ad683d87e31706a051679 274 Gene3D G3DSA:3.40.225.10 1 274 1.9E-87 T 18-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CH53_1105 5ba9ccc01d9ad683d87e31706a051679 274 SUPERFAMILY SSF53639 1 270 1.53E-73 T 18-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CH53_673 e2c40a491ad9e4cde1eb09ae9402d04f 295 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 43.699 T 18-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 CH53_673 e2c40a491ad9e4cde1eb09ae9402d04f 295 SUPERFAMILY SSF53697 4 248 7.7E-75 T 18-10-2018 CH53_673 e2c40a491ad9e4cde1eb09ae9402d04f 295 Gene3D G3DSA:1.10.8.1080 219 295 2.6E-30 T 18-10-2018 CH53_673 e2c40a491ad9e4cde1eb09ae9402d04f 295 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 18-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 CH53_673 e2c40a491ad9e4cde1eb09ae9402d04f 295 Gene3D G3DSA:3.40.50.10490 1 218 7.7E-86 T 18-10-2018 CH53_673 e2c40a491ad9e4cde1eb09ae9402d04f 295 Pfam PF01380 SIS domain 129 208 5.3E-9 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_673 e2c40a491ad9e4cde1eb09ae9402d04f 295 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 295 4.6E-130 T 18-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 CH53_2959 6981af38b3cca774ad8ed160f7afdece 156 Gene3D G3DSA:3.10.450.50 25 147 1.1E-27 T 18-10-2018 CH53_2959 6981af38b3cca774ad8ed160f7afdece 156 Pfam PF12680 SnoaL-like domain 31 128 8.3E-8 T 18-10-2018 IPR037401 SnoaL-like domain CH53_2959 6981af38b3cca774ad8ed160f7afdece 156 SUPERFAMILY SSF54427 29 144 4.39E-18 T 18-10-2018 IPR032710 NTF2-like domain superfamily CH53_3983 cd84c89f6f13bc2fdd519c5edd587547 586 Gene3D G3DSA:3.40.50.300 1 293 1.6E-82 T 18-10-2018 CH53_3983 cd84c89f6f13bc2fdd519c5edd587547 586 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 12 292 1.1E-86 T 18-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 CH53_3983 cd84c89f6f13bc2fdd519c5edd587547 586 SMART SM00382 327 521 0.055 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3983 cd84c89f6f13bc2fdd519c5edd587547 586 SMART SM00382 7 226 3.5 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3983 cd84c89f6f13bc2fdd519c5edd587547 586 SUPERFAMILY SSF52540 319 549 8.83E-42 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3983 cd84c89f6f13bc2fdd519c5edd587547 586 Pfam PF02374 Anion-transporting ATPase 10 291 9.7E-80 T 18-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 CH53_3983 cd84c89f6f13bc2fdd519c5edd587547 586 Pfam PF02374 Anion-transporting ATPase 330 484 8.2E-31 T 18-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 CH53_3983 cd84c89f6f13bc2fdd519c5edd587547 586 Pfam PF02374 Anion-transporting ATPase 485 584 3.2E-7 T 18-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 CH53_3983 cd84c89f6f13bc2fdd519c5edd587547 586 SUPERFAMILY SSF52540 1 263 2.55E-47 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3983 cd84c89f6f13bc2fdd519c5edd587547 586 PIRSF PIRSF001327 1 586 2.4E-260 T 18-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 CH53_3983 cd84c89f6f13bc2fdd519c5edd587547 586 Gene3D G3DSA:3.40.50.300 312 583 2.4E-68 T 18-10-2018 CH53_3983 cd84c89f6f13bc2fdd519c5edd587547 586 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 7 572 2.9E-289 T 18-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 CH53_3853 d93e5fb76452ea9407c71a49893ba780 183 Gene3D G3DSA:3.40.109.10 1 183 3.9E-43 T 18-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CH53_3853 d93e5fb76452ea9407c71a49893ba780 183 SUPERFAMILY SSF55469 1 181 2.75E-39 T 18-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CH53_3853 d93e5fb76452ea9407c71a49893ba780 183 PIRSF PIRSF000232 1 183 2.0E-64 T 18-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CH53_3853 d93e5fb76452ea9407c71a49893ba780 183 Pfam PF00881 Nitroreductase family 8 161 3.9E-22 T 18-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CH53_3620 52260a870676b20bf905c679a4438ff9 218 Gene3D G3DSA:3.40.50.12740 2 209 1.1E-56 T 18-10-2018 CH53_3620 52260a870676b20bf905c679a4438ff9 218 SMART SM00448 2 115 1.7E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3620 52260a870676b20bf905c679a4438ff9 218 SUPERFAMILY SSF46894 137 210 1.09E-18 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_3620 52260a870676b20bf905c679a4438ff9 218 SMART SM00421 146 203 5.1E-18 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3620 52260a870676b20bf905c679a4438ff9 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3620 52260a870676b20bf905c679a4438ff9 218 Pfam PF00072 Response regulator receiver domain 4 116 1.8E-29 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3620 52260a870676b20bf905c679a4438ff9 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.4E-10 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3620 52260a870676b20bf905c679a4438ff9 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.4E-10 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3620 52260a870676b20bf905c679a4438ff9 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.4E-10 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3620 52260a870676b20bf905c679a4438ff9 218 SUPERFAMILY SSF52172 3 131 6.69E-32 T 18-10-2018 IPR011006 CheY-like superfamily CH53_3620 52260a870676b20bf905c679a4438ff9 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 6.7E-19 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_4406 741f4c7f2579b1fa2df3d6358cb9c8b0 223 SMART SM00862 145 220 7.6E-21 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_4406 741f4c7f2579b1fa2df3d6358cb9c8b0 223 Gene3D G3DSA:3.40.50.2300 1 120 5.1E-40 T 18-10-2018 CH53_4406 741f4c7f2579b1fa2df3d6358cb9c8b0 223 Gene3D G3DSA:1.10.10.10 123 223 1.1E-26 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4406 741f4c7f2579b1fa2df3d6358cb9c8b0 223 SMART SM00448 1 112 2.0E-39 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_4406 741f4c7f2579b1fa2df3d6358cb9c8b0 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 5.7E-21 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_4406 741f4c7f2579b1fa2df3d6358cb9c8b0 223 Pfam PF00072 Response regulator receiver domain 3 112 4.9E-26 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_4406 741f4c7f2579b1fa2df3d6358cb9c8b0 223 SUPERFAMILY SSF52172 1 175 1.02E-38 T 18-10-2018 IPR011006 CheY-like superfamily CH53_332 5f9813d0cb991ffb65ac85a8d4c7f758 80 SUPERFAMILY SSF52009 2 77 1.7E-16 T 18-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 CH53_332 5f9813d0cb991ffb65ac85a8d4c7f758 80 Pfam PF00391 PEP-utilising enzyme, mobile domain 2 67 5.7E-12 T 18-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CH53_332 5f9813d0cb991ffb65ac85a8d4c7f758 80 Gene3D G3DSA:3.50.30.10 2 75 9.2E-18 T 18-10-2018 CH53_1907 00b415fd23a94f1edc7c4ea1127d4090 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 381 1.6E-142 T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CH53_1907 00b415fd23a94f1edc7c4ea1127d4090 386 Gene3D G3DSA:3.40.640.10 1 247 1.5E-87 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_1907 00b415fd23a94f1edc7c4ea1127d4090 386 SUPERFAMILY SSF53383 5 381 1.36E-123 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_1907 00b415fd23a94f1edc7c4ea1127d4090 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CH53_1907 00b415fd23a94f1edc7c4ea1127d4090 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 381 3.2E-207 T 18-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 CH53_1907 00b415fd23a94f1edc7c4ea1127d4090 386 PIRSF PIRSF001434 1 383 1.4E-135 T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CH53_1907 00b415fd23a94f1edc7c4ea1127d4090 386 Gene3D G3DSA:3.90.1150.10 248 384 1.6E-54 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_1053 8faa440156d7861609dda9d66f29696b 217 Gene3D G3DSA:3.30.2350.10 2 217 3.8E-72 T 18-10-2018 CH53_1053 8faa440156d7861609dda9d66f29696b 217 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 6 213 1.6E-57 T 18-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_1053 8faa440156d7861609dda9d66f29696b 217 Pfam PF00849 RNA pseudouridylate synthase 20 167 2.6E-28 T 18-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_1053 8faa440156d7861609dda9d66f29696b 217 SUPERFAMILY SSF55120 6 214 2.24E-62 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_1053 8faa440156d7861609dda9d66f29696b 217 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 58 72 - T 18-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_1900 9d53f9337702f0afe50913a59efb9182 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 2.6E-6 T 18-10-2018 IPR019489 Clp ATPase, C-terminal CH53_1900 9d53f9337702f0afe50913a59efb9182 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 8.4E-7 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CH53_1900 9d53f9337702f0afe50913a59efb9182 443 Gene3D G3DSA:1.10.8.60 335 440 1.6E-41 T 18-10-2018 CH53_1900 9d53f9337702f0afe50913a59efb9182 443 SUPERFAMILY SSF52540 3 441 1.82E-96 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1900 9d53f9337702f0afe50913a59efb9182 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.585 T 18-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CH53_1900 9d53f9337702f0afe50913a59efb9182 443 SMART SM01086 335 434 4.4E-24 T 18-10-2018 IPR019489 Clp ATPase, C-terminal CH53_1900 9d53f9337702f0afe50913a59efb9182 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 1.3E-231 T 18-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CH53_1900 9d53f9337702f0afe50913a59efb9182 443 SMART SM00382 49 332 7.9E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1900 9d53f9337702f0afe50913a59efb9182 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 187 329 2.7E-41 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CH53_2573 24dd3f68d8b742961520a872b6cd31ed 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 4.4E-21 T 18-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CH53_2573 24dd3f68d8b742961520a872b6cd31ed 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 718 0.0 T 18-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 CH53_2573 24dd3f68d8b742961520a872b6cd31ed 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 705 1.1E-47 T 18-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CH53_2573 24dd3f68d8b742961520a872b6cd31ed 720 Gene3D G3DSA:3.90.1150.10 421 600 4.6E-71 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_2573 24dd3f68d8b742961520a872b6cd31ed 720 Gene3D G3DSA:3.40.50.220 2 108 1.5E-22 T 18-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 CH53_2573 24dd3f68d8b742961520a872b6cd31ed 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 18-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CH53_2573 24dd3f68d8b742961520a872b6cd31ed 720 SUPERFAMILY SSF55904 572 719 8.24E-46 T 18-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 CH53_2573 24dd3f68d8b742961520a872b6cd31ed 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 549 6.5E-195 T 18-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CH53_2573 24dd3f68d8b742961520a872b6cd31ed 720 PIRSF PIRSF009393 2 719 1.9E-289 T 18-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CH53_2573 24dd3f68d8b742961520a872b6cd31ed 720 SUPERFAMILY SSF52172 1 108 1.79E-30 T 18-10-2018 IPR011006 CheY-like superfamily CH53_2573 24dd3f68d8b742961520a872b6cd31ed 720 Gene3D G3DSA:3.90.100.10 601 720 2.0E-40 T 18-10-2018 CH53_2573 24dd3f68d8b742961520a872b6cd31ed 720 SUPERFAMILY SSF53383 109 566 1.67E-118 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_2573 24dd3f68d8b742961520a872b6cd31ed 720 Gene3D G3DSA:3.40.640.10 109 420 2.3E-86 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_4258 ab66ac5595985a012a68944fc3978e89 221 SUPERFAMILY SSF56784 6 215 1.71E-49 T 18-10-2018 IPR036412 HAD-like superfamily CH53_4258 ab66ac5595985a012a68944fc3978e89 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 190 3.6E-25 T 18-10-2018 CH53_4258 ab66ac5595985a012a68944fc3978e89 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 5.0E-8 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_4258 ab66ac5595985a012a68944fc3978e89 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 5.0E-8 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_4258 ab66ac5595985a012a68944fc3978e89 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 5.0E-8 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_4258 ab66ac5595985a012a68944fc3978e89 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 5.0E-8 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_4258 ab66ac5595985a012a68944fc3978e89 221 Gene3D G3DSA:3.40.50.1000 10 202 4.0E-60 T 18-10-2018 IPR023214 HAD superfamily CH53_4258 ab66ac5595985a012a68944fc3978e89 221 Gene3D G3DSA:1.10.150.240 20 91 4.0E-60 T 18-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CH53_4258 ab66ac5595985a012a68944fc3978e89 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 191 1.1E-12 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1484 b809f598f80073bab3bc75627b009ce4 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-45 T 18-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CH53_1484 b809f598f80073bab3bc75627b009ce4 92 Gene3D G3DSA:3.30.860.10 1 92 3.9E-43 T 18-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1484 b809f598f80073bab3bc75627b009ce4 92 Pfam PF00203 Ribosomal protein S19 3 83 1.3E-35 T 18-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1484 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.5E-24 T 18-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1484 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.5E-24 T 18-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1484 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.5E-24 T 18-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1484 b809f598f80073bab3bc75627b009ce4 92 PIRSF PIRSF002144 1 92 2.3E-31 T 18-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1484 b809f598f80073bab3bc75627b009ce4 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 18-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1484 b809f598f80073bab3bc75627b009ce4 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.571 T 18-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1484 b809f598f80073bab3bc75627b009ce4 92 SUPERFAMILY SSF54570 3 84 5.75E-35 T 18-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_4378 05a40191bb52645c95d1c5f8b2ce5351 283 SUPERFAMILY SSF56112 18 226 1.47E-21 T 18-10-2018 IPR011009 Protein kinase-like domain superfamily CH53_4378 05a40191bb52645c95d1c5f8b2ce5351 283 SMART SM00090 5 228 1.8E-14 T 18-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 CH53_4378 05a40191bb52645c95d1c5f8b2ce5351 283 Gene3D G3DSA:3.30.200.20 16 126 2.0E-5 T 18-10-2018 CH53_4378 05a40191bb52645c95d1c5f8b2ce5351 283 Gene3D G3DSA:1.10.510.10 135 226 6.7E-19 T 18-10-2018 CH53_4378 05a40191bb52645c95d1c5f8b2ce5351 283 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 18-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 CH53_4378 05a40191bb52645c95d1c5f8b2ce5351 283 Pfam PF01163 RIO1 family 31 219 1.1E-42 T 18-10-2018 CH53_1429 6f711e5cd4a59dc7f464b662b0bb2695 155 SUPERFAMILY SSF48452 20 135 3.23E-14 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1429 6f711e5cd4a59dc7f464b662b0bb2695 155 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 41 60 2.6E-11 T 18-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD CH53_1429 6f711e5cd4a59dc7f464b662b0bb2695 155 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 65 87 2.6E-11 T 18-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD CH53_1429 6f711e5cd4a59dc7f464b662b0bb2695 155 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 16 39 2.6E-11 T 18-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD CH53_1429 6f711e5cd4a59dc7f464b662b0bb2695 155 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 97 119 2.6E-11 T 18-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD CH53_1429 6f711e5cd4a59dc7f464b662b0bb2695 155 PIRSF PIRSF003165 2 154 6.5E-46 T 18-10-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup CH53_1429 6f711e5cd4a59dc7f464b662b0bb2695 155 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 14 145 8.1E-34 T 18-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD CH53_1429 6f711e5cd4a59dc7f464b662b0bb2695 155 Gene3D G3DSA:1.25.40.10 6 151 5.6E-40 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_4091 82d1ce12ae73039e280ce28cef1e09fe 200 Gene3D G3DSA:1.10.357.10 2 199 7.6E-59 T 18-10-2018 CH53_4091 82d1ce12ae73039e280ce28cef1e09fe 200 SUPERFAMILY SSF48498 83 196 5.84E-24 T 18-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH53_4091 82d1ce12ae73039e280ce28cef1e09fe 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 56 7.5E-7 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_4091 82d1ce12ae73039e280ce28cef1e09fe 200 Pfam PF16925 Bacterial transcriptional repressor C-terminal 88 187 4.5E-11 T 18-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CH53_4091 82d1ce12ae73039e280ce28cef1e09fe 200 SUPERFAMILY SSF46689 3 76 5.03E-13 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1408 a07a0ee627538573daebf21037d01aca 89 Pfam PF01313 Bacterial export proteins, family 3 6 78 6.0E-27 T 18-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CH53_1408 a07a0ee627538573daebf21037d01aca 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.1E-25 T 18-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CH53_1408 a07a0ee627538573daebf21037d01aca 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.1E-25 T 18-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CH53_1408 a07a0ee627538573daebf21037d01aca 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.1E-25 T 18-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CH53_1408 a07a0ee627538573daebf21037d01aca 89 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 6 84 2.7E-32 T 18-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 CH53_1408 a07a0ee627538573daebf21037d01aca 89 PIRSF PIRSF004669 1 89 6.7E-27 T 18-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CH53_2577 ac9058f31de9b1cc2505ac05f2d6abfb 354 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 168 2.1E-20 T 18-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CH53_2577 ac9058f31de9b1cc2505ac05f2d6abfb 354 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 277 5.3E-124 T 18-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 CH53_2577 ac9058f31de9b1cc2505ac05f2d6abfb 354 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 193 209 - T 18-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CH53_2577 ac9058f31de9b1cc2505ac05f2d6abfb 354 SUPERFAMILY SSF55811 221 346 2.57E-23 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CH53_2577 ac9058f31de9b1cc2505ac05f2d6abfb 354 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 18-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CH53_2577 ac9058f31de9b1cc2505ac05f2d6abfb 354 Pfam PF14815 NUDIX domain 235 343 5.6E-24 T 18-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CH53_2577 ac9058f31de9b1cc2505ac05f2d6abfb 354 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 193 209 3.4E-4 T 18-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CH53_2577 ac9058f31de9b1cc2505ac05f2d6abfb 354 SMART SM00478 40 191 8.2E-52 T 18-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CH53_2577 ac9058f31de9b1cc2505ac05f2d6abfb 354 SUPERFAMILY SSF48150 3 226 2.2E-79 T 18-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CH53_2577 ac9058f31de9b1cc2505ac05f2d6abfb 354 SMART SM00525 192 212 4.8E-4 T 18-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CH53_2577 ac9058f31de9b1cc2505ac05f2d6abfb 354 Pfam PF00633 Helix-hairpin-helix motif 100 128 1.6E-9 T 18-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CH53_2577 ac9058f31de9b1cc2505ac05f2d6abfb 354 Gene3D G3DSA:1.10.340.30 22 133 1.8E-89 T 18-10-2018 CH53_2577 ac9058f31de9b1cc2505ac05f2d6abfb 354 Gene3D G3DSA:3.90.79.10 223 352 4.4E-13 T 18-10-2018 CH53_2577 ac9058f31de9b1cc2505ac05f2d6abfb 354 Gene3D G3DSA:1.10.1670.10 10 212 1.8E-89 T 18-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CH53_2828 d77f2c9a630304f402f9502508aa22b0 587 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 375 399 - T 18-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 CH53_2828 d77f2c9a630304f402f9502508aa22b0 587 Gene3D G3DSA:3.60.20.40 375 579 1.2E-67 T 18-10-2018 CH53_2828 d77f2c9a630304f402f9502508aa22b0 587 Gene3D G3DSA:1.10.246.130 262 374 1.7E-41 T 18-10-2018 CH53_2828 d77f2c9a630304f402f9502508aa22b0 587 Pfam PF01019 Gamma-glutamyltranspeptidase 49 578 3.1E-182 T 18-10-2018 CH53_2828 d77f2c9a630304f402f9502508aa22b0 587 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 34 551 2.3E-173 T 18-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 CH53_2828 d77f2c9a630304f402f9502508aa22b0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 440 455 1.6E-77 T 18-10-2018 CH53_2828 d77f2c9a630304f402f9502508aa22b0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 56 81 1.6E-77 T 18-10-2018 CH53_2828 d77f2c9a630304f402f9502508aa22b0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 375 393 1.6E-77 T 18-10-2018 CH53_2828 d77f2c9a630304f402f9502508aa22b0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 276 295 1.6E-77 T 18-10-2018 CH53_2828 d77f2c9a630304f402f9502508aa22b0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 147 1.6E-77 T 18-10-2018 CH53_2828 d77f2c9a630304f402f9502508aa22b0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 166 1.6E-77 T 18-10-2018 CH53_2828 d77f2c9a630304f402f9502508aa22b0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 399 417 1.6E-77 T 18-10-2018 CH53_2828 d77f2c9a630304f402f9502508aa22b0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 464 481 1.6E-77 T 18-10-2018 CH53_2828 d77f2c9a630304f402f9502508aa22b0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 246 262 1.6E-77 T 18-10-2018 CH53_2828 d77f2c9a630304f402f9502508aa22b0 587 SUPERFAMILY SSF56235 25 587 2.32E-184 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CH53_3145 50a95b679d66cfcb42d110449ec9247e 290 SUPERFAMILY SSF51735 1 122 1.08E-45 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3145 50a95b679d66cfcb42d110449ec9247e 290 Pfam PF00549 CoA-ligase 151 271 7.5E-21 T 18-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CH53_3145 50a95b679d66cfcb42d110449ec9247e 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.271 T 18-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CH53_3145 50a95b679d66cfcb42d110449ec9247e 290 Gene3D G3DSA:3.40.50.261 124 289 1.8E-76 T 18-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CH53_3145 50a95b679d66cfcb42d110449ec9247e 290 SMART SM00881 4 100 2.1E-39 T 18-10-2018 IPR003781 CoA-binding GO:0048037 CH53_3145 50a95b679d66cfcb42d110449ec9247e 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.1E-40 T 18-10-2018 CH53_3145 50a95b679d66cfcb42d110449ec9247e 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.1E-40 T 18-10-2018 CH53_3145 50a95b679d66cfcb42d110449ec9247e 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.1E-40 T 18-10-2018 CH53_3145 50a95b679d66cfcb42d110449ec9247e 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.1E-40 T 18-10-2018 CH53_3145 50a95b679d66cfcb42d110449ec9247e 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 18-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CH53_3145 50a95b679d66cfcb42d110449ec9247e 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 1.4E-146 T 18-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CH53_3145 50a95b679d66cfcb42d110449ec9247e 290 Gene3D G3DSA:3.40.50.720 1 123 5.4E-52 T 18-10-2018 CH53_3145 50a95b679d66cfcb42d110449ec9247e 290 SUPERFAMILY SSF52210 123 287 3.92E-56 T 18-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CH53_3145 50a95b679d66cfcb42d110449ec9247e 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 18-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CH53_3145 50a95b679d66cfcb42d110449ec9247e 290 PIRSF PIRSF001553 1 290 1.1E-134 T 18-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CH53_3145 50a95b679d66cfcb42d110449ec9247e 290 Pfam PF02629 CoA binding domain 6 99 6.0E-33 T 18-10-2018 IPR003781 CoA-binding GO:0048037 CH53_2823 281576fe35c1e58a942b9563837994ad 330 Gene3D G3DSA:3.40.190.10 130 272 2.3E-102 T 18-10-2018 CH53_2823 281576fe35c1e58a942b9563837994ad 330 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 45 314 1.9E-67 T 18-10-2018 IPR011862 Phosphate binding protein GO:0042301 CH53_2823 281576fe35c1e58a942b9563837994ad 330 Pfam PF12849 PBP superfamily domain 42 299 4.9E-30 T 18-10-2018 IPR024370 PBP domain CH53_2823 281576fe35c1e58a942b9563837994ad 330 SUPERFAMILY SSF53850 46 327 2.93E-67 T 18-10-2018 CH53_2823 281576fe35c1e58a942b9563837994ad 330 Gene3D G3DSA:3.40.190.10 45 316 2.3E-102 T 18-10-2018 CH53_3931 8599a01b053c1f9f745d60558d1a9b79 209 PIRSF PIRSF006091 1 203 3.2E-71 T 18-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CH53_3931 8599a01b053c1f9f745d60558d1a9b79 209 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 3.8E-66 T 18-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CH53_3931 8599a01b053c1f9f745d60558d1a9b79 209 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 26.223 T 18-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CH53_3931 8599a01b053c1f9f745d60558d1a9b79 209 SMART SM00900 100 192 3.4E-32 T 18-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CH53_3931 8599a01b053c1f9f745d60558d1a9b79 209 Pfam PF04205 FMN-binding domain 100 187 1.0E-16 T 18-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CH53_2487 9b25ab22d2c4e48a25ad21c7c50700fd 144 Gene3D G3DSA:3.10.450.50 4 129 5.4E-17 T 18-10-2018 CH53_2487 9b25ab22d2c4e48a25ad21c7c50700fd 144 Pfam PF12680 SnoaL-like domain 13 112 7.1E-11 T 18-10-2018 IPR037401 SnoaL-like domain CH53_2487 9b25ab22d2c4e48a25ad21c7c50700fd 144 SUPERFAMILY SSF54427 1 131 3.71E-20 T 18-10-2018 IPR032710 NTF2-like domain superfamily CH53_1070 a85931682752aa96f74be14615288bd9 169 TIGRFAM TIGR00077 lspA: signal peptidase II 2 161 1.3E-52 T 18-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CH53_1070 a85931682752aa96f74be14615288bd9 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.3E-18 T 18-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CH53_1070 a85931682752aa96f74be14615288bd9 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.3E-18 T 18-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CH53_1070 a85931682752aa96f74be14615288bd9 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.3E-18 T 18-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CH53_1070 a85931682752aa96f74be14615288bd9 169 Pfam PF01252 Signal peptidase (SPase) II 16 154 1.0E-38 T 18-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CH53_1070 a85931682752aa96f74be14615288bd9 169 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 18-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CH53_1070 a85931682752aa96f74be14615288bd9 169 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.524 T 18-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 3.1E-134 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 5.4E-97 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 5.4E-97 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 5.4E-97 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 5.4E-97 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 5.4E-97 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 5.4E-97 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 5.4E-97 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 5.4E-97 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 5.4E-97 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 5.4E-97 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 5.4E-97 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 5.4E-97 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 18-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 Gene3D G3DSA:1.20.210.10 30 565 5.7E-189 T 18-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 SUPERFAMILY SSF81442 43 560 4.58E-178 T 18-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2854 c47133b12d7315e26c576c6ffdaa1b3c 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 18-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_3052 507189dac9be253dd34b161710de4eff 196 SMART SM00421 136 193 4.0E-9 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3052 507189dac9be253dd34b161710de4eff 196 Gene3D G3DSA:1.10.10.10 102 195 1.1E-13 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3052 507189dac9be253dd34b161710de4eff 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 1.8E-5 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3052 507189dac9be253dd34b161710de4eff 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 1.8E-5 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3052 507189dac9be253dd34b161710de4eff 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 1.8E-5 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3052 507189dac9be253dd34b161710de4eff 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 192 2.1E-12 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3052 507189dac9be253dd34b161710de4eff 196 SUPERFAMILY SSF46894 134 193 3.3E-13 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_1181 550cb2dc9d741f549f806d33ea3aae7f 136 Pfam PF00583 Acetyltransferase (GNAT) family 25 114 2.7E-15 T 18-10-2018 IPR000182 GNAT domain CH53_1181 550cb2dc9d741f549f806d33ea3aae7f 136 SUPERFAMILY SSF55729 33 135 5.73E-27 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_1181 550cb2dc9d741f549f806d33ea3aae7f 136 Gene3D G3DSA:3.40.630.30 35 136 7.9E-28 T 18-10-2018 CH53_1013 66a2d15348b9d318252c2776330b7d51 383 SUPERFAMILY SSF55307 203 319 2.98E-42 T 18-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 CH53_1013 66a2d15348b9d318252c2776330b7d51 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 337 8.0E-142 T 18-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 CH53_1013 66a2d15348b9d318252c2776330b7d51 383 SMART SM00865 206 324 8.3E-56 T 18-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 CH53_1013 66a2d15348b9d318252c2776330b7d51 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 1.4E-51 T 18-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CH53_1013 66a2d15348b9d318252c2776330b7d51 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 1.4E-51 T 18-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CH53_1013 66a2d15348b9d318252c2776330b7d51 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 1.4E-51 T 18-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CH53_1013 66a2d15348b9d318252c2776330b7d51 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 1.4E-51 T 18-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CH53_1013 66a2d15348b9d318252c2776330b7d51 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 1.1E-41 T 18-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CH53_1013 66a2d15348b9d318252c2776330b7d51 383 SMART SM00864 12 204 4.3E-112 T 18-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CH53_1013 66a2d15348b9d318252c2776330b7d51 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 18-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CH53_1013 66a2d15348b9d318252c2776330b7d51 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 18-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CH53_1013 66a2d15348b9d318252c2776330b7d51 383 Gene3D G3DSA:3.40.50.1440 9 316 1.5E-116 T 18-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 CH53_1013 66a2d15348b9d318252c2776330b7d51 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 5.7E-37 T 18-10-2018 IPR024757 Cell division protein FtsZ, C-terminal CH53_1013 66a2d15348b9d318252c2776330b7d51 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 343 38.094 T 18-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 CH53_1013 66a2d15348b9d318252c2776330b7d51 383 SUPERFAMILY SSF52490 12 207 1.3E-69 T 18-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 Gene3D G3DSA:3.40.50.620 33 566 0.0 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 SUPERFAMILY SSF47323 662 859 1.12E-37 T 18-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 652 2.9E-7 T 18-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 571 6.7E-6 T 18-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 171 6.4E-26 T 18-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 SUPERFAMILY SSF50677 226 415 3.98E-55 T 18-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 Gene3D G3DSA:1.10.730.10 8 791 0.0 T 18-10-2018 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.297 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 Gene3D G3DSA:3.10.330.110 567 628 0.0 T 18-10-2018 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 Gene3D G3DSA:3.10.20.590 799 860 2.9E-25 T 18-10-2018 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 SUPERFAMILY SSF52374 5 668 1.81E-140 T 18-10-2018 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 1.1E-76 T 18-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 Pfam PF08264 Anticodon-binding domain of tRNA 701 822 2.8E-16 T 18-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 18-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.0E-52 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.0E-52 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.0E-52 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 7.0E-52 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 7.0E-52 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 7.0E-52 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CH53_3070 bb304cc8806164da7d7d76f0195fc97a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.0E-52 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CH53_726 6c6ea34b17e5357eae794cb2bc1cb782 221 Gene3D G3DSA:3.40.50.300 12 212 3.7E-45 T 18-10-2018 CH53_726 6c6ea34b17e5357eae794cb2bc1cb782 221 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 15 185 1.3E-30 T 18-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CH53_726 6c6ea34b17e5357eae794cb2bc1cb782 221 PIRSF PIRSF005624 2 217 1.9E-48 T 18-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 CH53_726 6c6ea34b17e5357eae794cb2bc1cb782 221 Hamap MF_01389 Urease accessory protein UreG [ureG]. 11 212 45.052 T 18-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 CH53_726 6c6ea34b17e5357eae794cb2bc1cb782 221 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 14 210 8.1E-79 T 18-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 CH53_726 6c6ea34b17e5357eae794cb2bc1cb782 221 SUPERFAMILY SSF52540 9 207 4.97E-36 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1289 a4526fded23ab6095ea7f84f35d86ff4 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 4.0E-43 T 18-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CH53_1289 a4526fded23ab6095ea7f84f35d86ff4 97 SMART SM01103 3 86 2.5E-41 T 18-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CH53_1289 a4526fded23ab6095ea7f84f35d86ff4 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 3.5E-23 T 18-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CH53_1289 a4526fded23ab6095ea7f84f35d86ff4 97 Gene3D G3DSA:3.30.110.60 1 97 3.1E-37 T 18-10-2018 IPR035920 YhbY-like superfamily CH53_1289 a4526fded23ab6095ea7f84f35d86ff4 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 94 9.7E-39 T 18-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 CH53_1289 a4526fded23ab6095ea7f84f35d86ff4 97 SUPERFAMILY SSF75471 1 96 1.57E-31 T 18-10-2018 IPR035920 YhbY-like superfamily CH53_2470 1fab885901491b75daab50bb443e38bf 151 Pfam PF00486 Transcriptional regulatory protein, C terminal 57 129 9.2E-9 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_2470 1fab885901491b75daab50bb443e38bf 151 SUPERFAMILY SSF46894 53 130 4.25E-11 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_2470 1fab885901491b75daab50bb443e38bf 151 Gene3D G3DSA:1.10.10.10 41 136 2.7E-12 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2470 1fab885901491b75daab50bb443e38bf 151 SMART SM00862 51 130 2.7E-5 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_2849 c5fc08d0f07265a48a584f03ccb2128f 163 Gene3D G3DSA:3.30.70.860 98 163 9.4E-32 T 18-10-2018 IPR035571 UPF0234-like, C-terminal CH53_2849 c5fc08d0f07265a48a584f03ccb2128f 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.135 T 18-10-2018 IPR007551 Protein of unknown function DUF520 CH53_2849 c5fc08d0f07265a48a584f03ccb2128f 163 Gene3D G3DSA:3.30.70.990 9 97 1.5E-32 T 18-10-2018 IPR035570 UPF0234, N-terminal CH53_2849 c5fc08d0f07265a48a584f03ccb2128f 163 SUPERFAMILY SSF89963 2 89 5.49E-30 T 18-10-2018 IPR036183 YajQ-like superfamily CH53_2849 c5fc08d0f07265a48a584f03ccb2128f 163 SUPERFAMILY SSF89963 91 163 2.88E-29 T 18-10-2018 IPR036183 YajQ-like superfamily CH53_2849 c5fc08d0f07265a48a584f03ccb2128f 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 1.5E-65 T 18-10-2018 IPR007551 Protein of unknown function DUF520 CH53_3326 deb9d1f914171153a26d91261a2b5f82 204 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 18.432 T 18-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CH53_3326 deb9d1f914171153a26d91261a2b5f82 204 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 5.0E-23 T 18-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CH53_3326 deb9d1f914171153a26d91261a2b5f82 204 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 201 5.5E-16 T 18-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 CH53_3326 deb9d1f914171153a26d91261a2b5f82 204 SUPERFAMILY SSF141734 5 122 5.75E-46 T 18-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 CH53_3326 deb9d1f914171153a26d91261a2b5f82 204 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 197 4.6E-30 T 18-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CH53_3326 deb9d1f914171153a26d91261a2b5f82 204 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 37.423 T 18-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 CH53_3326 deb9d1f914171153a26d91261a2b5f82 204 Gene3D G3DSA:3.10.20.400 3 97 3.0E-33 T 18-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 CH53_3326 deb9d1f914171153a26d91261a2b5f82 204 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 3.5E-30 T 18-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CH53_3326 deb9d1f914171153a26d91261a2b5f82 204 Gene3D G3DSA:1.10.287.1080 112 204 8.3E-28 T 18-10-2018 CH53_3326 deb9d1f914171153a26d91261a2b5f82 204 SUPERFAMILY SSF101386 114 202 3.05E-23 T 18-10-2018 CH53_4266 6b89992a5047fb253190485930a6a8dc 429 Gene3D G3DSA:3.40.190.10 138 414 1.8E-159 T 18-10-2018 CH53_4266 6b89992a5047fb253190485930a6a8dc 429 Pfam PF01547 Bacterial extracellular solute-binding protein 46 332 3.4E-23 T 18-10-2018 IPR006059 Bacterial extracellular solute-binding protein CH53_4266 6b89992a5047fb253190485930a6a8dc 429 Gene3D G3DSA:3.40.190.10 29 372 1.8E-159 T 18-10-2018 CH53_4266 6b89992a5047fb253190485930a6a8dc 429 SUPERFAMILY SSF53850 25 425 1.47E-60 T 18-10-2018 CH53_3528 4fe395ab62b45811fd7eda2e0bc1abba 232 PRINTS PR01837 MgtC/SapB protein signature 13 32 4.3E-47 T 18-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CH53_3528 4fe395ab62b45811fd7eda2e0bc1abba 232 PRINTS PR01837 MgtC/SapB protein signature 32 50 4.3E-47 T 18-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CH53_3528 4fe395ab62b45811fd7eda2e0bc1abba 232 PRINTS PR01837 MgtC/SapB protein signature 57 79 4.3E-47 T 18-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CH53_3528 4fe395ab62b45811fd7eda2e0bc1abba 232 PRINTS PR01837 MgtC/SapB protein signature 84 108 4.3E-47 T 18-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CH53_3528 4fe395ab62b45811fd7eda2e0bc1abba 232 Gene3D G3DSA:3.30.70.260 139 230 6.7E-15 T 18-10-2018 CH53_3528 4fe395ab62b45811fd7eda2e0bc1abba 232 Pfam PF02308 MgtC family 10 129 1.8E-38 T 18-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CH53_1124 5fb947f8dca01c8a58cd750399283341 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.4E-12 T 18-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CH53_1124 5fb947f8dca01c8a58cd750399283341 529 SUPERFAMILY SSF50447 262 393 3.09E-29 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CH53_1124 5fb947f8dca01c8a58cd750399283341 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 18-10-2018 IPR031157 Tr-type G domain, conserved site CH53_1124 5fb947f8dca01c8a58cd750399283341 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.075 T 18-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CH53_1124 5fb947f8dca01c8a58cd750399283341 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1124 5fb947f8dca01c8a58cd750399283341 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1124 5fb947f8dca01c8a58cd750399283341 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1124 5fb947f8dca01c8a58cd750399283341 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1124 5fb947f8dca01c8a58cd750399283341 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1124 5fb947f8dca01c8a58cd750399283341 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 158 2.9E-18 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CH53_1124 5fb947f8dca01c8a58cd750399283341 529 Gene3D G3DSA:3.40.50.300 110 275 8.1E-118 T 18-10-2018 CH53_1124 5fb947f8dca01c8a58cd750399283341 529 SUPERFAMILY SSF54980 393 468 8.27E-17 T 18-10-2018 IPR035647 EF-G domain III/V-like CH53_1124 5fb947f8dca01c8a58cd750399283341 529 Gene3D G3DSA:3.30.70.3280 390 529 8.2E-53 T 18-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily CH53_1124 5fb947f8dca01c8a58cd750399283341 529 Gene3D G3DSA:3.40.50.300 72 379 8.1E-118 T 18-10-2018 CH53_1124 5fb947f8dca01c8a58cd750399283341 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 0.0 T 18-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CH53_1124 5fb947f8dca01c8a58cd750399283341 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 8.8E-47 T 18-10-2018 IPR032090 Peptide chain release factor 3, C-terminal CH53_1124 5fb947f8dca01c8a58cd750399283341 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 9.6E-46 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1124 5fb947f8dca01c8a58cd750399283341 529 SUPERFAMILY SSF52540 10 277 8.28E-85 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3670 5b8f0e647a3dab147e6bb8f63ff13d92 250 Gene3D G3DSA:2.60.40.10 149 243 2.9E-21 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_3670 5b8f0e647a3dab147e6bb8f63ff13d92 250 PRINTS PR00969 Pili chaperone signature 103 120 4.5E-34 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3670 5b8f0e647a3dab147e6bb8f63ff13d92 250 PRINTS PR00969 Pili chaperone signature 73 94 4.5E-34 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3670 5b8f0e647a3dab147e6bb8f63ff13d92 250 PRINTS PR00969 Pili chaperone signature 165 180 4.5E-34 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3670 5b8f0e647a3dab147e6bb8f63ff13d92 250 PRINTS PR00969 Pili chaperone signature 126 141 4.5E-34 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3670 5b8f0e647a3dab147e6bb8f63ff13d92 250 PRINTS PR00969 Pili chaperone signature 27 36 4.5E-34 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_3670 5b8f0e647a3dab147e6bb8f63ff13d92 250 SUPERFAMILY SSF49354 27 144 4.71E-39 T 18-10-2018 IPR008962 PapD-like superfamily CH53_3670 5b8f0e647a3dab147e6bb8f63ff13d92 250 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 170 230 4.5E-15 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_3670 5b8f0e647a3dab147e6bb8f63ff13d92 250 Gene3D G3DSA:2.60.40.10 26 145 2.6E-42 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_3670 5b8f0e647a3dab147e6bb8f63ff13d92 250 SUPERFAMILY SSF49584 153 243 3.92E-23 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_3670 5b8f0e647a3dab147e6bb8f63ff13d92 250 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 102 119 - T 18-10-2018 IPR018046 Pili assembly chaperone, conserved site CH53_3670 5b8f0e647a3dab147e6bb8f63ff13d92 250 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 144 3.2E-38 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_2887 0ae7c15400a099c15f6340fee359fa55 47 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 41 0.002 T 18-10-2018 CH53_2887 0ae7c15400a099c15f6340fee359fa55 47 SUPERFAMILY SSF57840 8 41 7.59E-14 T 18-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2887 0ae7c15400a099c15f6340fee359fa55 47 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.15 T 18-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2887 0ae7c15400a099c15f6340fee359fa55 47 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 18-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2887 0ae7c15400a099c15f6340fee359fa55 47 Pfam PF00444 Ribosomal protein L36 1 41 2.6E-17 T 18-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2887 0ae7c15400a099c15f6340fee359fa55 47 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 9 41 1.5E-9 T 18-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_3583 f4380eff78105674dd958748d505d2fc 650 Pfam PF01757 Acyltransferase family 18 335 7.7E-28 T 18-10-2018 IPR002656 Acyltransferase 3 GO:0016747 CH53_644 9afd81122e976030397dd99c0a42a581 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 6.9E-25 T 18-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CH53_644 9afd81122e976030397dd99c0a42a581 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 9.7E-37 T 18-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CH53_644 9afd81122e976030397dd99c0a42a581 107 Gene3D G3DSA:2.60.300.12 2 107 5.4E-37 T 18-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CH53_644 9afd81122e976030397dd99c0a42a581 107 SUPERFAMILY SSF89360 1 95 5.36E-33 T 18-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CH53_644 9afd81122e976030397dd99c0a42a581 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 18-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CH53_644 9afd81122e976030397dd99c0a42a581 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.1E-57 T 18-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 CH53_644 9afd81122e976030397dd99c0a42a581 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 38.401 T 18-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 CH53_2588 31ebe03a50d9f436333ce546292689ef 379 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 46 372 6.6E-129 T 18-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 CH53_2588 31ebe03a50d9f436333ce546292689ef 379 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 234 248 - T 18-10-2018 IPR001482 Type II/IV secretion system protein CH53_2588 31ebe03a50d9f436333ce546292689ef 379 Gene3D G3DSA:3.40.50.300 143 378 1.9E-88 T 18-10-2018 CH53_2588 31ebe03a50d9f436333ce546292689ef 379 Pfam PF00437 Type II/IV secretion system protein 55 305 9.1E-41 T 18-10-2018 IPR001482 Type II/IV secretion system protein CH53_2588 31ebe03a50d9f436333ce546292689ef 379 Gene3D G3DSA:3.30.450.90 35 140 8.5E-23 T 18-10-2018 CH53_2588 31ebe03a50d9f436333ce546292689ef 379 SUPERFAMILY SSF52540 47 370 1.88E-60 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2692 0a11c0f61b9e59bf1457e68a3b2f5a24 1123 Gene3D G3DSA:1.10.10.990 865 936 8.4E-27 T 18-10-2018 CH53_2692 0a11c0f61b9e59bf1457e68a3b2f5a24 1123 SUPERFAMILY SSF52540 370 810 2.12E-102 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2692 0a11c0f61b9e59bf1457e68a3b2f5a24 1123 Gene3D G3DSA:1.10.10.160 79 187 1.3E-129 T 18-10-2018 IPR013986 DExx box DNA helicase domain superfamily CH53_2692 0a11c0f61b9e59bf1457e68a3b2f5a24 1123 SUPERFAMILY SSF52540 1 347 1.49E-126 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2692 0a11c0f61b9e59bf1457e68a3b2f5a24 1123 Gene3D G3DSA:3.40.50.300 334 809 1.7E-201 T 18-10-2018 CH53_2692 0a11c0f61b9e59bf1457e68a3b2f5a24 1123 SUPERFAMILY SSF52980 819 1121 2.04E-96 T 18-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CH53_2692 0a11c0f61b9e59bf1457e68a3b2f5a24 1123 PIRSF PIRSF000980 1 1123 0.0 T 18-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CH53_2692 0a11c0f61b9e59bf1457e68a3b2f5a24 1123 Gene3D G3DSA:3.40.50.10930 4 315 1.3E-129 T 18-10-2018 CH53_2692 0a11c0f61b9e59bf1457e68a3b2f5a24 1123 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 807 8.6E-300 T 18-10-2018 CH53_2692 0a11c0f61b9e59bf1457e68a3b2f5a24 1123 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1088 0.0 T 18-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CH53_2692 0a11c0f61b9e59bf1457e68a3b2f5a24 1123 Gene3D G3DSA:1.10.486.10 456 664 1.7E-201 T 18-10-2018 CH53_2692 0a11c0f61b9e59bf1457e68a3b2f5a24 1123 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1123 21.024 T 18-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CH53_2602 09ecabe2660a5ff2c051b31d5932a18c 107 Gene3D G3DSA:2.102.10.10 1 102 5.3E-32 T 18-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CH53_2602 09ecabe2660a5ff2c051b31d5932a18c 107 SUPERFAMILY SSF50022 1 101 3.93E-33 T 18-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CH53_2602 09ecabe2660a5ff2c051b31d5932a18c 107 Pfam PF00355 Rieske [2Fe-2S] domain 3 89 6.7E-20 T 18-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CH53_751 be6732bffceee44993929015093bd48e 78 Gene3D G3DSA:3.40.30.10 1 78 6.0E-27 T 18-10-2018 CH53_751 be6732bffceee44993929015093bd48e 78 SUPERFAMILY SSF52833 1 72 1.79E-17 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_751 be6732bffceee44993929015093bd48e 78 Pfam PF00462 Glutaredoxin 3 61 8.1E-14 T 18-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CH53_751 be6732bffceee44993929015093bd48e 78 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 73 2.7E-34 T 18-10-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 CH53_3999 1fe9606bc7809ea21971125eed781f5e 329 SUPERFAMILY SSF56317 7 306 1.18E-54 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CH53_3999 1fe9606bc7809ea21971125eed781f5e 329 Pfam PF00795 Carbon-nitrogen hydrolase 8 284 1.3E-37 T 18-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CH53_3999 1fe9606bc7809ea21971125eed781f5e 329 Gene3D G3DSA:3.60.110.10 6 303 1.2E-54 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CH53_2378 99abe1970e328ba918bb19d584524e5f 197 Pfam PF00482 Type II secretion system (T2SS), protein F 55 183 7.5E-14 T 18-10-2018 IPR018076 Type II secretion system F domain CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 378 610 5.4E-49 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 347 2.4E-34 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 479 3.8E-24 T 18-10-2018 CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 3.8E-24 T 18-10-2018 CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 541 3.8E-24 T 18-10-2018 CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 557 3.8E-24 T 18-10-2018 CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.8E-24 T 18-10-2018 CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 Gene3D G3DSA:3.40.1110.10 325 453 2.8E-55 T 18-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 3 683 0.0 T 18-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 Pfam PF00122 E1-E2 ATPase 115 288 3.8E-32 T 18-10-2018 CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 SUPERFAMILY SSF56784 299 565 1.55E-37 T 18-10-2018 IPR036412 HAD-like superfamily CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 Gene3D G3DSA:2.70.150.20 106 212 3.7E-26 T 18-10-2018 CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 686 41.135 T 18-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 313 319 - T 18-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 536 9.8E-36 T 18-10-2018 CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 SUPERFAMILY SSF81665 61 305 2.62E-10 T 18-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CH53_3124 28ecd714b7f697f8d0068fa3be4993c4 688 SUPERFAMILY SSF81653 115 207 1.27E-20 T 18-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CH53_2377 1b2aa23c018965a00bc4d719f4ac5ff5 251 Gene3D G3DSA:1.25.40.10 27 245 1.3E-14 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_2377 1b2aa23c018965a00bc4d719f4ac5ff5 251 SUPERFAMILY SSF48452 57 218 2.68E-13 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_977 a44e85d0a983d811f769cfe74fbc0858 181 ProDom PD040905 SECRETED SOPD SOP POSSIBLE HOMOLOGOUS FAMILY EFFECTOR THE TRANSFERRED VIRULENCE 13 121 3.0E-6 T 18-10-2018 IPR022747 Salmonella outer protein D GO:0009405|GO:0033644 CH53_977 a44e85d0a983d811f769cfe74fbc0858 181 Pfam PF11047 Salmonella outer protein D 6 111 4.2E-8 T 18-10-2018 IPR022747 Salmonella outer protein D GO:0009405|GO:0033644 CH53_977 a44e85d0a983d811f769cfe74fbc0858 181 Gene3D G3DSA:3.30.2440.10 26 140 3.8E-21 T 18-10-2018 CH53_977 a44e85d0a983d811f769cfe74fbc0858 181 Pfam PF06767 Sif protein 1 116 1.5E-8 T 18-10-2018 IPR010637 Sif CH53_1192 b25eae22ef7205852091ae05adf16117 208 Pfam PF04829 Pre-toxin domain with VENN motif 4 34 1.2E-9 T 18-10-2018 IPR006914 VENN motif-containing domain CH53_1192 b25eae22ef7205852091ae05adf16117 208 Pfam PF15530 Bacterial toxin 25 40 206 4.8E-73 T 18-10-2018 IPR029113 Bacterial toxin 25 CH53_1199 3a8a034400470d35ec90be205fe8d0d9 87 Pfam PF07377 Protein of unknown function (DUF1493) 6 81 1.0E-6 T 18-10-2018 IPR010862 Protein of unknown function DUF1493 CH53_2595 59771fd4288e3f618191896602398640 235 SUPERFAMILY SSF54060 25 230 5.89E-88 T 18-10-2018 CH53_2595 59771fd4288e3f618191896602398640 235 Pfam PF04231 Endonuclease I 42 229 2.1E-42 T 18-10-2018 IPR007346 Endonuclease I GO:0004518 CH53_1569 d3665c672590abf0314f309a113e04f1 801 Gene3D G3DSA:3.40.50.2000 61 798 0.0 T 18-10-2018 CH53_1569 d3665c672590abf0314f309a113e04f1 801 PIRSF PIRSF000460 2 801 1.5E-206 T 18-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CH53_1569 d3665c672590abf0314f309a113e04f1 801 Gene3D G3DSA:3.40.50.2000 457 784 0.0 T 18-10-2018 CH53_1569 d3665c672590abf0314f309a113e04f1 801 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 12 798 0.0 T 18-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CH53_1569 d3665c672590abf0314f309a113e04f1 801 Pfam PF00343 Carbohydrate phosphorylase 94 798 0.0 T 18-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CH53_1569 d3665c672590abf0314f309a113e04f1 801 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 643 655 - T 18-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CH53_1569 d3665c672590abf0314f309a113e04f1 801 SUPERFAMILY SSF53756 6 799 2.98E-292 T 18-10-2018 CH53_2198 78835c2a9af863964848c1c36680bed8 325 SUPERFAMILY SSF50129 1 144 1.19E-46 T 18-10-2018 IPR011032 GroES-like superfamily CH53_2198 78835c2a9af863964848c1c36680bed8 325 SUPERFAMILY SSF51735 117 288 3.53E-39 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2198 78835c2a9af863964848c1c36680bed8 325 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 324 1.6E-136 T 18-10-2018 IPR014188 Acrylyl-CoA reductase AcuI CH53_2198 78835c2a9af863964848c1c36680bed8 325 Gene3D G3DSA:3.90.180.10 16 323 2.5E-126 T 18-10-2018 CH53_2198 78835c2a9af863964848c1c36680bed8 325 SMART SM00829 7 322 4.3E-4 T 18-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CH53_2198 78835c2a9af863964848c1c36680bed8 325 Gene3D G3DSA:3.40.50.720 125 292 2.5E-126 T 18-10-2018 CH53_2198 78835c2a9af863964848c1c36680bed8 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 1.4E-4 T 18-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CH53_2198 78835c2a9af863964848c1c36680bed8 325 Pfam PF00107 Zinc-binding dehydrogenase 158 281 4.0E-16 T 18-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CH53_4347 afc2dd166806dddf4c8d0500e6250e34 392 SUPERFAMILY SSF52440 3 112 9.35E-35 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CH53_4347 afc2dd166806dddf4c8d0500e6250e34 392 Pfam PF02222 ATP-grasp domain 123 295 1.9E-55 T 18-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CH53_4347 afc2dd166806dddf4c8d0500e6250e34 392 SUPERFAMILY SSF56059 113 314 2.3E-55 T 18-10-2018 CH53_4347 afc2dd166806dddf4c8d0500e6250e34 392 Gene3D G3DSA:3.30.1490.20 123 196 7.0E-32 T 18-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CH53_4347 afc2dd166806dddf4c8d0500e6250e34 392 Gene3D G3DSA:3.30.470.20 197 389 1.1E-57 T 18-10-2018 CH53_4347 afc2dd166806dddf4c8d0500e6250e34 392 Gene3D G3DSA:3.40.50.20 2 122 2.4E-53 T 18-10-2018 CH53_4347 afc2dd166806dddf4c8d0500e6250e34 392 SUPERFAMILY SSF51246 319 390 4.39E-17 T 18-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CH53_4347 afc2dd166806dddf4c8d0500e6250e34 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 390 3.7E-187 T 18-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CH53_4347 afc2dd166806dddf4c8d0500e6250e34 392 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 8 391 51.361 T 18-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CH53_2580 42eae1482d64b783862d7f3969282e9b 300 Pfam PF04960 Glutaminase 16 300 7.3E-114 T 18-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CH53_2580 42eae1482d64b783862d7f3969282e9b 300 SUPERFAMILY SSF56601 2 300 4.55E-116 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CH53_2580 42eae1482d64b783862d7f3969282e9b 300 TIGRFAM TIGR03814 Gln_ase: glutaminase A 2 300 5.3E-132 T 18-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CH53_2580 42eae1482d64b783862d7f3969282e9b 300 Gene3D G3DSA:3.40.710.10 1 300 4.9E-110 T 18-10-2018 CH53_2580 42eae1482d64b783862d7f3969282e9b 300 Hamap MF_00313 Glutaminase [glsA]. 1 300 46.147 T 18-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CH53_3694 2fb43a47f42f5c3991270c2f340b6234 420 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 254 411 1.9E-40 T 18-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain CH53_3694 2fb43a47f42f5c3991270c2f340b6234 420 Gene3D G3DSA:3.40.980.20 241 419 4.0E-61 T 18-10-2018 CH53_3694 2fb43a47f42f5c3991270c2f340b6234 420 Gene3D G3DSA:3.40.50.10840 1 234 5.7E-86 T 18-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily CH53_3694 2fb43a47f42f5c3991270c2f340b6234 420 Pfam PF07005 Putative sugar-binding N-terminal domain 3 227 3.0E-67 T 18-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain CH53_3694 2fb43a47f42f5c3991270c2f340b6234 420 SUPERFAMILY SSF142764 3 416 1.44E-130 T 18-10-2018 CH53_3933 9884cc43d33147234c7cdd4244476a8e 295 Gene3D G3DSA:1.10.10.60 7 57 1.0E-20 T 18-10-2018 CH53_3933 9884cc43d33147234c7cdd4244476a8e 295 SUPERFAMILY SSF46689 8 57 1.73E-8 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3933 9884cc43d33147234c7cdd4244476a8e 295 Pfam PF06445 GyrI-like small molecule binding domain 130 278 3.5E-15 T 18-10-2018 IPR029442 GyrI-like small molecule binding domain CH53_3933 9884cc43d33147234c7cdd4244476a8e 295 Gene3D G3DSA:1.10.10.60 58 122 1.3E-21 T 18-10-2018 CH53_3933 9884cc43d33147234c7cdd4244476a8e 295 SUPERFAMILY SSF55136 127 270 8.89E-15 T 18-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CH53_3933 9884cc43d33147234c7cdd4244476a8e 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 8.3E-8 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_3933 9884cc43d33147234c7cdd4244476a8e 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 8.3E-8 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_3933 9884cc43d33147234c7cdd4244476a8e 295 SMART SM00342 23 106 6.2E-30 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_3933 9884cc43d33147234c7cdd4244476a8e 295 SUPERFAMILY SSF46689 61 108 2.33E-11 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3933 9884cc43d33147234c7cdd4244476a8e 295 Gene3D G3DSA:3.20.80.10 125 289 4.0E-18 T 18-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CH53_3933 9884cc43d33147234c7cdd4244476a8e 295 Pfam PF12833 Helix-turn-helix domain 30 107 2.0E-18 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_2663 e1c820dff6de72b599d85353407dbd51 411 SUPERFAMILY SSF53067 25 164 1.14E-23 T 18-10-2018 CH53_2663 e1c820dff6de72b599d85353407dbd51 411 Pfam PF12693 GspL periplasmic domain 262 381 7.9E-8 T 18-10-2018 IPR025691 GspL periplasmic domain CH53_2663 e1c820dff6de72b599d85353407dbd51 411 Pfam PF05134 Type II secretion system (T2SS), protein L 27 251 6.8E-40 T 18-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain CH53_2663 e1c820dff6de72b599d85353407dbd51 411 Gene3D G3DSA:3.30.420.380 26 249 9.0E-56 T 18-10-2018 CH53_2663 e1c820dff6de72b599d85353407dbd51 411 PIRSF PIRSF015761 44 398 4.1E-11 T 18-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 CH53_2663 e1c820dff6de72b599d85353407dbd51 411 SUPERFAMILY SSF53067 168 249 8.29E-12 T 18-10-2018 CH53_2663 e1c820dff6de72b599d85353407dbd51 411 Gene3D G3DSA:3.30.420.370 162 227 9.0E-56 T 18-10-2018 CH53_3092 df3b6c0f120c56e645a2b35c430337df 554 PIRSF PIRSF001589 1 368 8.0E-108 T 18-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CH53_3092 df3b6c0f120c56e645a2b35c430337df 554 PIRSF PIRSF001589 363 507 5.1E-28 T 18-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CH53_3092 df3b6c0f120c56e645a2b35c430337df 554 SUPERFAMILY SSF56235 1 196 1.2E-57 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CH53_3092 df3b6c0f120c56e645a2b35c430337df 554 Gene3D G3DSA:3.60.20.10 2 193 1.8E-75 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CH53_3092 df3b6c0f120c56e645a2b35c430337df 554 Pfam PF00733 Asparagine synthase 212 366 2.5E-58 T 18-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CH53_3092 df3b6c0f120c56e645a2b35c430337df 554 Gene3D G3DSA:3.40.50.620 194 514 2.1E-114 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_3092 df3b6c0f120c56e645a2b35c430337df 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 8.8E-123 T 18-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CH53_3092 df3b6c0f120c56e645a2b35c430337df 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 1.3E-40 T 18-10-2018 IPR017932 Glutamine amidotransferase type 2 domain CH53_3092 df3b6c0f120c56e645a2b35c430337df 554 SUPERFAMILY SSF52402 212 483 2.33E-74 T 18-10-2018 CH53_1808 86655beb99497005f0ce7ef25274d1d2 349 Gene3D G3DSA:3.30.450.20 9 112 1.0E-16 T 18-10-2018 CH53_1808 86655beb99497005f0ce7ef25274d1d2 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 3.0E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_1808 86655beb99497005f0ce7ef25274d1d2 349 SMART SM00091 7 75 2.5E-7 T 18-10-2018 IPR000014 PAS domain CH53_1808 86655beb99497005f0ce7ef25274d1d2 349 SMART SM00388 129 194 1.6E-14 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_1808 86655beb99497005f0ce7ef25274d1d2 349 Gene3D G3DSA:3.30.565.10 192 348 1.8E-41 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1808 86655beb99497005f0ce7ef25274d1d2 349 SUPERFAMILY SSF47384 121 190 1.22E-12 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_1808 86655beb99497005f0ce7ef25274d1d2 349 SUPERFAMILY SSF55785 11 98 1.77E-5 T 18-10-2018 IPR035965 PAS domain superfamily CH53_1808 86655beb99497005f0ce7ef25274d1d2 349 Gene3D G3DSA:1.10.287.130 116 191 4.8E-14 T 18-10-2018 CH53_1808 86655beb99497005f0ce7ef25274d1d2 349 Pfam PF00989 PAS fold 11 97 5.0E-6 T 18-10-2018 IPR013767 PAS fold GO:0006355 CH53_1808 86655beb99497005f0ce7ef25274d1d2 349 SUPERFAMILY SSF55874 198 346 4.32E-35 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1808 86655beb99497005f0ce7ef25274d1d2 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 190 3.3E-14 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_1808 86655beb99497005f0ce7ef25274d1d2 349 SMART SM00387 233 349 4.4E-30 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_1808 86655beb99497005f0ce7ef25274d1d2 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 2.3E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1808 86655beb99497005f0ce7ef25274d1d2 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 2.3E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1808 86655beb99497005f0ce7ef25274d1d2 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 2.3E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_185 67c5bb1459babc5aa0795f519acb5069 573 Gene3D G3DSA:3.40.50.970 1 178 2.5E-61 T 18-10-2018 CH53_185 67c5bb1459babc5aa0795f519acb5069 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 171 6.6E-43 T 18-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CH53_185 67c5bb1459babc5aa0795f519acb5069 573 SUPERFAMILY SSF52518 357 558 6.97E-63 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_185 67c5bb1459babc5aa0795f519acb5069 573 SUPERFAMILY SSF52518 2 178 4.88E-45 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_185 67c5bb1459babc5aa0795f519acb5069 573 SUPERFAMILY SSF52467 183 351 8.67E-43 T 18-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH53_185 67c5bb1459babc5aa0795f519acb5069 573 Gene3D G3DSA:3.40.50.970 348 573 1.1E-74 T 18-10-2018 CH53_185 67c5bb1459babc5aa0795f519acb5069 573 Gene3D G3DSA:3.40.50.1220 180 333 3.2E-48 T 18-10-2018 CH53_185 67c5bb1459babc5aa0795f519acb5069 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 18-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CH53_185 67c5bb1459babc5aa0795f519acb5069 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 526 3.0E-41 T 18-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CH53_185 67c5bb1459babc5aa0795f519acb5069 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 319 9.8E-32 T 18-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CH53_174 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.1E-27 T 18-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CH53_174 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SMART SM00316 4 72 4.3E-7 T 18-10-2018 IPR022967 RNA-binding domain, S1 CH53_174 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Gene3D G3DSA:2.40.50.140 1 72 9.2E-36 T 18-10-2018 CH53_174 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SUPERFAMILY SSF50249 1 70 1.18E-28 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_174 25ddc8d907d8c6cdf9a50a3e27ba432a 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.3E-38 T 18-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CH53_174 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.17 T 18-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CH53_1254 e396b498643de4845a7f752538a66ffe 158 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 8 157 3.9E-51 T 18-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CH53_1254 e396b498643de4845a7f752538a66ffe 158 Pfam PF06754 Phosphonate metabolism protein PhnG 8 156 1.3E-50 T 18-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CH53_3060 b645d3874a6eab6ef0294a35ae27d0d3 87 Gene3D G3DSA:3.30.70.260 1 87 3.7E-34 T 18-10-2018 CH53_3060 b645d3874a6eab6ef0294a35ae27d0d3 87 SUPERFAMILY SSF117991 1 87 3.53E-31 T 18-10-2018 IPR027471 YbeD-like domain superfamily CH53_3060 b645d3874a6eab6ef0294a35ae27d0d3 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 3.4E-29 T 18-10-2018 IPR007454 Uncharacterised protein family UPF0250 CH53_3060 b645d3874a6eab6ef0294a35ae27d0d3 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.46 T 18-10-2018 IPR007454 Uncharacterised protein family UPF0250 CH53_3917 11d31f27798efd648aa09637b1dd887a 86 Gene3D G3DSA:3.30.1660.10 19 86 6.6E-19 T 18-10-2018 IPR025543 Dodecin-like CH53_3917 11d31f27798efd648aa09637b1dd887a 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 1.7E-19 T 18-10-2018 IPR010854 Domain of unknown function DUF1471 CH53_3917 11d31f27798efd648aa09637b1dd887a 86 SUPERFAMILY SSF159871 3 86 7.72E-25 T 18-10-2018 IPR036275 YdgH-like superfamily CH53_3953 f22a1edb6b4936facdccbc07c6d5e9f2 399 SUPERFAMILY SSF54826 13 116 2.21E-30 T 18-10-2018 CH53_3953 f22a1edb6b4936facdccbc07c6d5e9f2 399 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 16 114 9.7E-27 T 18-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CH53_3953 f22a1edb6b4936facdccbc07c6d5e9f2 399 Pfam PF13378 Enolase C-terminal domain-like 165 371 9.6E-37 T 18-10-2018 IPR029065 Enolase C-terminal domain-like CH53_3953 f22a1edb6b4936facdccbc07c6d5e9f2 399 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 89 114 - T 18-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CH53_3953 f22a1edb6b4936facdccbc07c6d5e9f2 399 SMART SM00922 132 252 3.0E-11 T 18-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CH53_3953 f22a1edb6b4936facdccbc07c6d5e9f2 399 SUPERFAMILY SSF51604 102 379 2.75E-65 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CH53_3953 f22a1edb6b4936facdccbc07c6d5e9f2 399 Gene3D G3DSA:3.30.390.10 6 396 8.6E-166 T 18-10-2018 IPR029017 Enolase-like, N-terminal CH53_3953 f22a1edb6b4936facdccbc07c6d5e9f2 399 Gene3D G3DSA:3.20.20.120 109 363 8.6E-166 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CH53_4017 f38c882424ef009c85b951bb3b689546 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 6.3E-62 T 18-10-2018 CH53_4017 f38c882424ef009c85b951bb3b689546 246 SUPERFAMILY SSF51735 6 245 3.49E-78 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_4017 f38c882424ef009c85b951bb3b689546 246 Gene3D G3DSA:3.40.50.720 2 245 1.6E-77 T 18-10-2018 CH53_4017 f38c882424ef009c85b951bb3b689546 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 185 0.0026 T 18-10-2018 CH53_4017 f38c882424ef009c85b951bb3b689546 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.5E-11 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4017 f38c882424ef009c85b951bb3b689546 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.5E-11 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4017 f38c882424ef009c85b951bb3b689546 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.5E-11 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4017 f38c882424ef009c85b951bb3b689546 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.5E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4017 f38c882424ef009c85b951bb3b689546 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.5E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4017 f38c882424ef009c85b951bb3b689546 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.5E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4017 f38c882424ef009c85b951bb3b689546 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.5E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4017 f38c882424ef009c85b951bb3b689546 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.5E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4017 f38c882424ef009c85b951bb3b689546 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.5E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2970 2bc663879add6fe757c39478267b082e 291 Pfam PF03466 LysR substrate binding domain 89 283 1.7E-24 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_2970 2bc663879add6fe757c39478267b082e 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.3E-18 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2970 2bc663879add6fe757c39478267b082e 291 SUPERFAMILY SSF46785 1 111 3.97E-21 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2970 2bc663879add6fe757c39478267b082e 291 Gene3D G3DSA:3.40.190.290 90 285 1.0E-30 T 18-10-2018 CH53_2970 2bc663879add6fe757c39478267b082e 291 Gene3D G3DSA:1.10.10.10 1 85 3.4E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2970 2bc663879add6fe757c39478267b082e 291 SUPERFAMILY SSF53850 89 288 1.05E-27 T 18-10-2018 CH53_1479 4607bef6f01d5b77e0d11f76a7676fcb 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 7.8E-38 T 18-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1479 4607bef6f01d5b77e0d11f76a7676fcb 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.043 T 18-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1479 4607bef6f01d5b77e0d11f76a7676fcb 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 7.0E-36 T 18-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1479 4607bef6f01d5b77e0d11f76a7676fcb 84 SUPERFAMILY SSF50249 5 82 2.7E-33 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_1479 4607bef6f01d5b77e0d11f76a7676fcb 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 9.2E-14 T 18-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1479 4607bef6f01d5b77e0d11f76a7676fcb 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 9.2E-14 T 18-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1479 4607bef6f01d5b77e0d11f76a7676fcb 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 9.2E-14 T 18-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1479 4607bef6f01d5b77e0d11f76a7676fcb 84 Pfam PF00366 Ribosomal protein S17 10 76 1.6E-33 T 18-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1479 4607bef6f01d5b77e0d11f76a7676fcb 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 18-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1479 4607bef6f01d5b77e0d11f76a7676fcb 84 Gene3D G3DSA:2.40.50.140 1 84 5.9E-40 T 18-10-2018 CH53_1031 27f3f520d860abbd46edb0bb1fbfef57 575 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 570 6.9E-279 T 18-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CH53_1031 27f3f520d860abbd46edb0bb1fbfef57 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 171 4.0E-60 T 18-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CH53_1031 27f3f520d860abbd46edb0bb1fbfef57 575 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 18-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CH53_1031 27f3f520d860abbd46edb0bb1fbfef57 575 SUPERFAMILY SSF52467 188 362 9.82E-64 T 18-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH53_1031 27f3f520d860abbd46edb0bb1fbfef57 575 Gene3D G3DSA:3.40.50.970 364 562 5.1E-68 T 18-10-2018 CH53_1031 27f3f520d860abbd46edb0bb1fbfef57 575 Gene3D G3DSA:3.40.50.970 1 179 7.7E-73 T 18-10-2018 CH53_1031 27f3f520d860abbd46edb0bb1fbfef57 575 SUPERFAMILY SSF52518 371 568 1.11E-68 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_1031 27f3f520d860abbd46edb0bb1fbfef57 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 1.3E-46 T 18-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CH53_1031 27f3f520d860abbd46edb0bb1fbfef57 575 SUPERFAMILY SSF52518 2 180 8.32E-67 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_1031 27f3f520d860abbd46edb0bb1fbfef57 575 Gene3D G3DSA:3.40.50.1220 190 361 3.3E-61 T 18-10-2018 CH53_1031 27f3f520d860abbd46edb0bb1fbfef57 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 546 4.9E-50 T 18-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CH53_1793 a3acdc27b76169a90d8111290ffcd39c 229 SMART SM00345 18 77 7.0E-18 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1793 a3acdc27b76169a90d8111290ffcd39c 229 SUPERFAMILY SSF48008 107 223 1.01E-21 T 18-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CH53_1793 a3acdc27b76169a90d8111290ffcd39c 229 SMART SM00895 106 227 4.9E-19 T 18-10-2018 IPR011711 GntR, C-terminal CH53_1793 a3acdc27b76169a90d8111290ffcd39c 229 SUPERFAMILY SSF46785 10 81 1.45E-19 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1793 a3acdc27b76169a90d8111290ffcd39c 229 Pfam PF07729 FCD domain 110 222 5.4E-22 T 18-10-2018 IPR011711 GntR, C-terminal CH53_1793 a3acdc27b76169a90d8111290ffcd39c 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 77 2.0E-17 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1793 a3acdc27b76169a90d8111290ffcd39c 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 3.6E-9 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1793 a3acdc27b76169a90d8111290ffcd39c 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 3.6E-9 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1793 a3acdc27b76169a90d8111290ffcd39c 229 Gene3D G3DSA:1.20.120.530 102 228 1.3E-22 T 18-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CH53_1793 a3acdc27b76169a90d8111290ffcd39c 229 Gene3D G3DSA:1.10.10.10 1 79 9.0E-19 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1150 92bce41d0f805c0223572171f860ce19 356 Pfam PF02733 Dak1 domain 17 351 4.8E-126 T 18-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CH53_1150 92bce41d0f805c0223572171f860ce19 356 Gene3D G3DSA:3.30.1180.20 184 356 4.9E-63 T 18-10-2018 CH53_1150 92bce41d0f805c0223572171f860ce19 356 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 352 2.6E-147 T 18-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 CH53_1150 92bce41d0f805c0223572171f860ce19 356 SUPERFAMILY SSF82549 11 355 4.19E-125 T 18-10-2018 CH53_1150 92bce41d0f805c0223572171f860ce19 356 Gene3D G3DSA:3.40.50.10440 11 183 6.6E-64 T 18-10-2018 CH53_2061 f5c39fa76dc965a2b2629738d0795b5f 543 SUPERFAMILY SSF56112 94 435 1.92E-46 T 18-10-2018 IPR011009 Protein kinase-like domain superfamily CH53_2061 f5c39fa76dc965a2b2629738d0795b5f 543 Pfam PF03109 ABC1 family 113 231 1.0E-34 T 18-10-2018 IPR004147 UbiB domain CH53_2061 f5c39fa76dc965a2b2629738d0795b5f 543 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 57.475 T 18-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CH53_2061 f5c39fa76dc965a2b2629738d0795b5f 543 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 5.8E-179 T 18-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CH53_2830 95c09821faa407f839d9416bf07cc3f2 193 PIRSF PIRSF011489 1 193 2.5E-79 T 18-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CH53_2830 95c09821faa407f839d9416bf07cc3f2 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 55.711 T 18-10-2018 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CH53_2830 95c09821faa407f839d9416bf07cc3f2 193 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 8.3E-32 T 18-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CH53_3205 f0fd3520765f43d3ac25ead2df5cbc2a 341 SUPERFAMILY SSF54631 24 162 2.65E-22 T 18-10-2018 CH53_3205 f0fd3520765f43d3ac25ead2df5cbc2a 341 Pfam PF01769 Divalent cation transporter 209 330 7.2E-26 T 18-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CH53_3205 f0fd3520765f43d3ac25ead2df5cbc2a 341 Gene3D G3DSA:1.10.357.20 161 337 6.4E-50 T 18-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain CH53_3205 f0fd3520765f43d3ac25ead2df5cbc2a 341 SMART SM00116 95 142 0.059 T 18-10-2018 IPR000644 CBS domain CH53_3205 f0fd3520765f43d3ac25ead2df5cbc2a 341 SMART SM00116 30 83 49.0 T 18-10-2018 IPR000644 CBS domain CH53_3205 f0fd3520765f43d3ac25ead2df5cbc2a 341 SUPERFAMILY SSF161093 166 336 3.14E-45 T 18-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 CH53_3205 f0fd3520765f43d3ac25ead2df5cbc2a 341 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 338 7.5E-70 T 18-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CH53_3205 f0fd3520765f43d3ac25ead2df5cbc2a 341 Pfam PF00571 CBS domain 90 142 3.7E-5 T 18-10-2018 IPR000644 CBS domain CH53_3205 f0fd3520765f43d3ac25ead2df5cbc2a 341 Pfam PF00571 CBS domain 27 80 0.0059 T 18-10-2018 IPR000644 CBS domain CH53_3205 f0fd3520765f43d3ac25ead2df5cbc2a 341 Gene3D G3DSA:3.10.580.10 19 147 2.8E-23 T 18-10-2018 CH53_2398 5ed6c716d3b5dac9513d94c650e2ac15 344 Pfam PF01032 FecCD transport family 29 337 1.8E-87 T 18-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CH53_2398 5ed6c716d3b5dac9513d94c650e2ac15 344 SUPERFAMILY SSF81345 12 338 3.4E-78 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_2398 5ed6c716d3b5dac9513d94c650e2ac15 344 Gene3D G3DSA:1.10.3470.10 17 342 1.8E-90 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_783 b8a192077ad2ac16bed0757f65225457 83 Gene3D G3DSA:1.10.1200.10 1 77 1.5E-17 T 18-10-2018 IPR036736 ACP-like superfamily CH53_783 b8a192077ad2ac16bed0757f65225457 83 Pfam PF00550 Phosphopantetheine attachment site 8 75 2.5E-12 T 18-10-2018 IPR009081 Phosphopantetheine binding ACP domain CH53_783 b8a192077ad2ac16bed0757f65225457 83 SUPERFAMILY SSF47336 2 81 1.31E-17 T 18-10-2018 IPR036736 ACP-like superfamily CH53_510 0b08d863d3a7815ce53ef031d63185ec 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 392 1.3E-59 T 18-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CH53_510 0b08d863d3a7815ce53ef031d63185ec 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 7.5E-17 T 18-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CH53_510 0b08d863d3a7815ce53ef031d63185ec 394 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 7 392 2.7E-133 T 18-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CH53_510 0b08d863d3a7815ce53ef031d63185ec 394 Pfam PF07670 Nucleoside recognition 92 190 1.7E-7 T 18-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CH53_1202 431672845727362e600e61209e20c8d8 824 SUPERFAMILY SSF141729 51 160 9.68E-23 T 18-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 CH53_1202 431672845727362e600e61209e20c8d8 824 Pfam PF13953 PapC C-terminal domain 746 807 5.6E-15 T 18-10-2018 IPR025949 PapC-like, C-terminal domain CH53_1202 431672845727362e600e61209e20c8d8 824 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 299 309 - T 18-10-2018 IPR018030 Fimbrial membrane usher, conserved site CH53_1202 431672845727362e600e61209e20c8d8 824 Gene3D G3DSA:2.60.40.2610 652 742 8.7E-10 T 18-10-2018 CH53_1202 431672845727362e600e61209e20c8d8 824 Pfam PF00577 Outer membrane usher protein 186 736 1.9E-141 T 18-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 CH53_1202 431672845727362e600e61209e20c8d8 824 Gene3D G3DSA:2.60.40.3110 258 345 2.8E-27 T 18-10-2018 CH53_1202 431672845727362e600e61209e20c8d8 824 Gene3D G3DSA:3.10.20.410 24 144 7.7E-18 T 18-10-2018 CH53_1202 431672845727362e600e61209e20c8d8 824 Pfam PF13954 PapC N-terminal domain 26 167 2.1E-28 T 18-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 CH53_1202 431672845727362e600e61209e20c8d8 824 Gene3D G3DSA:2.60.40.2070 746 820 6.2E-20 T 18-10-2018 CH53_456 ac6018a9bc720814500a28879475dfcd 600 Pfam PF13175 AAA ATPase domain 1 366 8.0E-22 T 18-10-2018 CH53_456 ac6018a9bc720814500a28879475dfcd 600 SUPERFAMILY SSF52540 1 369 1.17E-20 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4133 9ce75816a1268517d4224d9b280a154a 667 SUPERFAMILY SSF53328 1 202 1.83E-56 T 18-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CH53_4133 9ce75816a1268517d4224d9b280a154a 667 PIRSF PIRSF036506 1 660 0.0 T 18-10-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00520+2.1.2.13+1.1.1.305 CH53_4133 9ce75816a1268517d4224d9b280a154a 667 Gene3D G3DSA:3.40.50.720 314 657 4.2E-122 T 18-10-2018 CH53_4133 9ce75816a1268517d4224d9b280a154a 667 Gene3D G3DSA:3.40.50.12230 1 304 7.8E-107 T 18-10-2018 CH53_4133 9ce75816a1268517d4224d9b280a154a 667 Pfam PF02911 Formyl transferase, C-terminal domain 203 282 7.1E-17 T 18-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CH53_4133 9ce75816a1268517d4224d9b280a154a 667 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 4.4E-42 T 18-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CH53_4133 9ce75816a1268517d4224d9b280a154a 667 Pfam PF00551 Formyl transferase 25 174 1.5E-25 T 18-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CH53_4133 9ce75816a1268517d4224d9b280a154a 667 SUPERFAMILY SSF50486 205 304 3.45E-22 T 18-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 CH53_4133 9ce75816a1268517d4224d9b280a154a 667 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 63.959 T 18-10-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00520+2.1.2.13+1.1.1.305 CH53_4133 9ce75816a1268517d4224d9b280a154a 667 SUPERFAMILY SSF51735 317 650 2.32E-68 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3350 516000050eba6b39250dbf90b9b54e59 405 Gene3D G3DSA:3.30.420.40 3 195 1.4E-66 T 18-10-2018 CH53_3350 516000050eba6b39250dbf90b9b54e59 405 SUPERFAMILY SSF53067 4 195 8.42E-65 T 18-10-2018 CH53_3350 516000050eba6b39250dbf90b9b54e59 405 Gene3D G3DSA:3.30.420.40 196 398 1.6E-78 T 18-10-2018 CH53_3350 516000050eba6b39250dbf90b9b54e59 405 Pfam PF00871 Acetokinase family 4 387 2.6E-147 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_3350 516000050eba6b39250dbf90b9b54e59 405 PIRSF PIRSF000722 1 396 1.5E-146 T 18-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_3350 516000050eba6b39250dbf90b9b54e59 405 PRINTS PR00471 Acetate kinase family signature 322 338 9.7E-42 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_3350 516000050eba6b39250dbf90b9b54e59 405 PRINTS PR00471 Acetate kinase family signature 300 313 9.7E-42 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_3350 516000050eba6b39250dbf90b9b54e59 405 PRINTS PR00471 Acetate kinase family signature 5 16 9.7E-42 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_3350 516000050eba6b39250dbf90b9b54e59 405 PRINTS PR00471 Acetate kinase family signature 203 224 9.7E-42 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_3350 516000050eba6b39250dbf90b9b54e59 405 PRINTS PR00471 Acetate kinase family signature 374 386 9.7E-42 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_3350 516000050eba6b39250dbf90b9b54e59 405 PRINTS PR00471 Acetate kinase family signature 173 186 9.7E-42 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_3350 516000050eba6b39250dbf90b9b54e59 405 SUPERFAMILY SSF53067 157 392 7.77E-87 T 18-10-2018 CH53_3350 516000050eba6b39250dbf90b9b54e59 405 TIGRFAM TIGR00016 ackA: acetate kinase 4 392 1.5E-154 T 18-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_3350 516000050eba6b39250dbf90b9b54e59 405 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 18-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_3350 516000050eba6b39250dbf90b9b54e59 405 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 18-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_3350 516000050eba6b39250dbf90b9b54e59 405 Hamap MF_00020 Acetate kinase [ackA]. 1 397 175.206 T 18-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CH53_3350 516000050eba6b39250dbf90b9b54e59 405 Hamap MF_01882 Probable propionate kinase [pduW]. 1 392 75.924 T 18-10-2018 IPR024896 Propionate kinase PduW GO:0008980|GO:0019543|GO:0051144 KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013 CH53_1412 f2179314c0fc5967a8a7dabc9127d727 445 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 23 423 8.1E-157 T 18-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_1412 f2179314c0fc5967a8a7dabc9127d727 445 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 359 2.2E-74 T 18-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_1412 f2179314c0fc5967a8a7dabc9127d727 445 SMART SM00382 162 343 7.8E-5 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1412 f2179314c0fc5967a8a7dabc9127d727 445 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 350 359 - T 18-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CH53_1412 f2179314c0fc5967a8a7dabc9127d727 445 SUPERFAMILY SSF52540 97 365 9.04E-92 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1412 f2179314c0fc5967a8a7dabc9127d727 445 Gene3D G3DSA:3.40.50.12240 25 444 1.0E-137 T 18-10-2018 CH53_770 cfccd50fa425b7891d6dad0b22875701 300 Gene3D G3DSA:3.40.190.10 92 290 3.2E-67 T 18-10-2018 CH53_770 cfccd50fa425b7891d6dad0b22875701 300 SUPERFAMILY SSF53850 91 296 1.68E-44 T 18-10-2018 CH53_770 cfccd50fa425b7891d6dad0b22875701 300 Gene3D G3DSA:3.40.190.10 164 264 3.2E-67 T 18-10-2018 CH53_770 cfccd50fa425b7891d6dad0b22875701 300 SUPERFAMILY SSF46785 6 85 1.96E-21 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_770 cfccd50fa425b7891d6dad0b22875701 300 Pfam PF03466 LysR substrate binding domain 91 293 9.8E-43 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_770 cfccd50fa425b7891d6dad0b22875701 300 Gene3D G3DSA:1.10.10.10 1 87 3.5E-28 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_770 cfccd50fa425b7891d6dad0b22875701 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.4E-18 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_664 13e82c61610ffcca267988f6e5f614ba 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 18-10-2018 IPR025944 Sigma-54 interaction domain, conserved site CH53_664 13e82c61610ffcca267988f6e5f614ba 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 18-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH53_664 13e82c61610ffcca267988f6e5f614ba 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 18-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH53_664 13e82c61610ffcca267988f6e5f614ba 445 Gene3D G3DSA:1.10.8.60 308 386 4.0E-22 T 18-10-2018 CH53_664 13e82c61610ffcca267988f6e5f614ba 445 SUPERFAMILY SSF52540 136 381 7.74E-71 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_664 13e82c61610ffcca267988f6e5f614ba 445 SUPERFAMILY SSF52172 6 181 3.13E-43 T 18-10-2018 IPR011006 CheY-like superfamily CH53_664 13e82c61610ffcca267988f6e5f614ba 445 Gene3D G3DSA:1.10.10.60 387 441 2.6E-9 T 18-10-2018 CH53_664 13e82c61610ffcca267988f6e5f614ba 445 Pfam PF00072 Response regulator receiver domain 10 118 3.6E-31 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_664 13e82c61610ffcca267988f6e5f614ba 445 SUPERFAMILY SSF46689 388 438 1.91E-7 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_664 13e82c61610ffcca267988f6e5f614ba 445 Gene3D G3DSA:3.40.50.2300 5 132 6.4E-37 T 18-10-2018 CH53_664 13e82c61610ffcca267988f6e5f614ba 445 Pfam PF00158 Sigma-54 interaction domain 137 303 4.1E-72 T 18-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CH53_664 13e82c61610ffcca267988f6e5f614ba 445 Gene3D G3DSA:3.40.50.300 133 307 3.1E-64 T 18-10-2018 CH53_664 13e82c61610ffcca267988f6e5f614ba 445 SMART SM00382 157 300 3.8E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_664 13e82c61610ffcca267988f6e5f614ba 445 SMART SM00448 7 118 2.3E-34 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_2509 1aa57119e6379c154071f9e1d30e4708 293 SUPERFAMILY SSF89028 109 267 4.9E-9 T 18-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CH53_2509 1aa57119e6379c154071f9e1d30e4708 293 PIRSF PIRSF012294 1 272 1.8E-83 T 18-10-2018 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type GO:0005524|GO:0006580|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 CH53_2509 1aa57119e6379c154071f9e1d30e4708 293 Pfam PF01923 Cobalamin adenosyltransferase 111 264 3.6E-11 T 18-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CH53_2804 8952077c206ae344dc1028d1804e3b8a 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 1.8E-186 T 18-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CH53_2804 8952077c206ae344dc1028d1804e3b8a 417 Gene3D G3DSA:3.40.605.10 14 411 3.0E-161 T 18-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CH53_2804 8952077c206ae344dc1028d1804e3b8a 417 PIRSF PIRSF000151 1 417 6.9E-174 T 18-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CH53_2804 8952077c206ae344dc1028d1804e3b8a 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 41.004 T 18-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CH53_2804 8952077c206ae344dc1028d1804e3b8a 417 Pfam PF00171 Aldehyde dehydrogenase family 4 280 5.0E-14 T 18-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CH53_2804 8952077c206ae344dc1028d1804e3b8a 417 Gene3D G3DSA:3.40.309.10 222 374 3.0E-161 T 18-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CH53_2804 8952077c206ae344dc1028d1804e3b8a 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 18-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CH53_2804 8952077c206ae344dc1028d1804e3b8a 417 SUPERFAMILY SSF53720 2 412 8.38E-113 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CH53_903 289f414f01044a4a89b25b687b96c31e 174 Pfam PF00419 Fimbrial protein 31 174 1.8E-15 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_903 289f414f01044a4a89b25b687b96c31e 174 Gene3D G3DSA:2.60.40.1090 41 174 9.9E-36 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_903 289f414f01044a4a89b25b687b96c31e 174 SUPERFAMILY SSF49401 29 174 1.74E-39 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_2794 70e707459515f417bcd8b74155255138 75 Pfam PF04400 (Na+)-NQR maturation NqrM 23 65 2.4E-22 T 18-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM CH53_3586 1529b0c8d2e22a6b6065e009a03da052 296 Pfam PF12833 Helix-turn-helix domain 190 265 6.3E-12 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_3586 1529b0c8d2e22a6b6065e009a03da052 296 Gene3D G3DSA:1.10.10.60 163 274 1.7E-19 T 18-10-2018 CH53_3586 1529b0c8d2e22a6b6065e009a03da052 296 SMART SM00342 183 265 3.0E-18 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_3586 1529b0c8d2e22a6b6065e009a03da052 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 234 249 4.7E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_3586 1529b0c8d2e22a6b6065e009a03da052 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 265 4.7E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_3586 1529b0c8d2e22a6b6065e009a03da052 296 SUPERFAMILY SSF46689 218 270 2.55E-11 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 1.6E-108 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.6E-108 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.6E-108 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.6E-108 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.6E-108 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.6E-108 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.6E-108 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.6E-108 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.6E-108 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 Gene3D G3DSA:1.20.1640.10 516 1024 0.0 T 18-10-2018 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 SUPERFAMILY SSF82866 300 497 4.45E-48 T 18-10-2018 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 SUPERFAMILY SSF82693 136 330 1.41E-23 T 18-10-2018 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1034 0.0 T 18-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 Gene3D G3DSA:3.30.70.1440 675 864 0.0 T 18-10-2018 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 Gene3D G3DSA:3.30.70.1430 570 674 0.0 T 18-10-2018 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 Gene3D G3DSA:1.20.1640.10 8 515 0.0 T 18-10-2018 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 SUPERFAMILY SSF82693 39 131 3.4E-27 T 18-10-2018 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 Gene3D G3DSA:3.30.70.1430 38 820 0.0 T 18-10-2018 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 Gene3D G3DSA:3.30.70.1320 133 330 0.0 T 18-10-2018 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 SUPERFAMILY SSF82866 807 1031 2.22E-46 T 18-10-2018 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 SUPERFAMILY SSF82714 723 810 6.41E-22 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 Gene3D G3DSA:3.30.2090.10 724 812 0.0 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 SUPERFAMILY SSF82693 566 672 3.4E-28 T 18-10-2018 CH53_562 5bab08b4251886bfecf6d7cb78f2a4a6 1039 SUPERFAMILY SSF82714 182 272 5.49E-23 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH53_201 dff95e95654aa2fc2012e06ff435511b 161 Pfam PF10767 Protein of unknown function (DUF2593) 21 158 5.0E-59 T 18-10-2018 IPR019703 Protein of unknown function DUF2593 CH53_3237 127a475d105a9c781a8ba2df9ab77132 725 Gene3D G3DSA:3.40.50.300 26 289 5.9E-39 T 18-10-2018 CH53_3237 127a475d105a9c781a8ba2df9ab77132 725 Gene3D G3DSA:3.40.50.300 505 690 3.0E-19 T 18-10-2018 CH53_3237 127a475d105a9c781a8ba2df9ab77132 725 SMART SM00487 23 307 0.0018 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH53_3237 127a475d105a9c781a8ba2df9ab77132 725 SUPERFAMILY SSF52540 213 671 2.07E-5 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3237 127a475d105a9c781a8ba2df9ab77132 725 Pfam PF13307 Helicase C-terminal domain 535 688 7.3E-24 T 18-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CH53_3237 127a475d105a9c781a8ba2df9ab77132 725 Pfam PF06733 DEAD_2 199 263 3.1E-7 T 18-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 CH53_3237 127a475d105a9c781a8ba2df9ab77132 725 SMART SM00491 545 677 9.3E-31 T 18-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CH53_3237 127a475d105a9c781a8ba2df9ab77132 725 SUPERFAMILY SSF52540 15 672 9.19E-16 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3237 127a475d105a9c781a8ba2df9ab77132 725 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 34 696 34.387 T 18-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 CH53_3286 b615b8f206bac42dcee3c28a44c22911 674 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 167 191 7.7E-11 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3286 b615b8f206bac42dcee3c28a44c22911 674 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 387 413 7.7E-11 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3286 b615b8f206bac42dcee3c28a44c22911 674 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 236 260 7.7E-11 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3286 b615b8f206bac42dcee3c28a44c22911 674 Pfam PF00361 Proton-conducting membrane transporter 134 418 1.4E-58 T 18-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_1476 3ce77a7126b6acff8f94170d398b3bc1 179 SUPERFAMILY SSF55282 4 179 5.65E-79 T 18-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1476 3ce77a7126b6acff8f94170d398b3bc1 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 6.0E-41 T 18-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1476 3ce77a7126b6acff8f94170d398b3bc1 179 PIRSF PIRSF002161 1 179 4.5E-66 T 18-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1476 3ce77a7126b6acff8f94170d398b3bc1 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.617 T 18-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1476 3ce77a7126b6acff8f94170d398b3bc1 179 Pfam PF00281 Ribosomal protein L5 24 80 1.4E-28 T 18-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1476 3ce77a7126b6acff8f94170d398b3bc1 179 Gene3D G3DSA:3.30.1440.10 1 179 2.1E-81 T 18-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_3141 de53c099ba30790b0fccfa8c49cf2c65 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_3141 de53c099ba30790b0fccfa8c49cf2c65 238 Gene3D G3DSA:3.10.20.30 1 106 1.3E-34 T 18-10-2018 IPR012675 Beta-grasp domain superfamily CH53_3141 de53c099ba30790b0fccfa8c49cf2c65 238 SUPERFAMILY SSF46548 107 236 8.72E-40 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CH53_3141 de53c099ba30790b0fccfa8c49cf2c65 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 5.8E-10 T 18-10-2018 CH53_3141 de53c099ba30790b0fccfa8c49cf2c65 238 SUPERFAMILY SSF54292 1 106 8.02E-31 T 18-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CH53_3141 de53c099ba30790b0fccfa8c49cf2c65 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 1.5E-31 T 18-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_3141 de53c099ba30790b0fccfa8c49cf2c65 238 Gene3D G3DSA:1.10.1060.10 107 238 2.8E-59 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CH53_3141 de53c099ba30790b0fccfa8c49cf2c65 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 9.5E-91 T 18-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_3892 e6c36888f5d4002222bff2c8366a18bc 211 Pfam PF03922 OmpW family 23 211 2.1E-65 T 18-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CH53_3892 e6c36888f5d4002222bff2c8366a18bc 211 Gene3D G3DSA:2.40.160.20 22 211 1.8E-77 T 18-10-2018 CH53_3892 e6c36888f5d4002222bff2c8366a18bc 211 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 203 211 - T 18-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CH53_3892 e6c36888f5d4002222bff2c8366a18bc 211 SUPERFAMILY SSF56925 23 211 7.06E-28 T 18-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CH53_3138 c40f642e88a9781482100ecaf101c8c1 71 SUPERFAMILY SSF81343 4 71 1.61E-15 T 18-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_3138 c40f642e88a9781482100ecaf101c8c1 71 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 26 39 - T 18-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_3138 c40f642e88a9781482100ecaf101c8c1 71 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 68 6.3E-18 T 18-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_3138 c40f642e88a9781482100ecaf101c8c1 71 Gene3D G3DSA:1.20.1300.10 1 71 9.5E-21 T 18-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_3138 c40f642e88a9781482100ecaf101c8c1 71 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 7 65 2.2E-12 T 18-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_1328 51db459db98422215b1753a586886d56 102 SUPERFAMILY SSF159871 8 102 8.76E-21 T 18-10-2018 IPR036275 YdgH-like superfamily CH53_1328 51db459db98422215b1753a586886d56 102 Gene3D G3DSA:3.30.1660.10 33 102 3.0E-16 T 18-10-2018 IPR025543 Dodecin-like CH53_1328 51db459db98422215b1753a586886d56 102 Pfam PF07338 Protein of unknown function (DUF1471) 47 102 4.9E-19 T 18-10-2018 IPR010854 Domain of unknown function DUF1471 CH53_1874 c9710feb4a895b81e3ed998872fa79dd 82 Pfam PF00462 Glutaredoxin 4 63 2.7E-25 T 18-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CH53_1874 c9710feb4a895b81e3ed998872fa79dd 82 Gene3D G3DSA:3.40.30.10 1 82 8.5E-30 T 18-10-2018 CH53_1874 c9710feb4a895b81e3ed998872fa79dd 82 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 18-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CH53_1874 c9710feb4a895b81e3ed998872fa79dd 82 SUPERFAMILY SSF52833 1 82 4.97E-30 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_1874 c9710feb4a895b81e3ed998872fa79dd 82 PRINTS PR00160 Glutaredoxin signature 4 22 8.7E-18 T 18-10-2018 IPR014025 Glutaredoxin subgroup CH53_1874 c9710feb4a895b81e3ed998872fa79dd 82 PRINTS PR00160 Glutaredoxin signature 60 73 8.7E-18 T 18-10-2018 IPR014025 Glutaredoxin subgroup CH53_1874 c9710feb4a895b81e3ed998872fa79dd 82 PRINTS PR00160 Glutaredoxin signature 46 59 8.7E-18 T 18-10-2018 IPR014025 Glutaredoxin subgroup CH53_1874 c9710feb4a895b81e3ed998872fa79dd 82 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 1.6E-36 T 18-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 CH53_1658 df0e6a778c32bc40aba1a94b7ca1b4e3 115 Gene3D G3DSA:3.30.70.100 1 93 1.9E-22 T 18-10-2018 CH53_1658 df0e6a778c32bc40aba1a94b7ca1b4e3 115 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 2.9E-14 T 18-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CH53_1658 df0e6a778c32bc40aba1a94b7ca1b4e3 115 SUPERFAMILY SSF54909 1 99 2.48E-27 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_3538 9079c7138d4b092b99211222a92da12a 557 SMART SM00319 44 182 1.4E-45 T 18-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CH53_3538 9079c7138d4b092b99211222a92da12a 557 SMART SM00304 216 268 2.1E-12 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_3538 9079c7138d4b092b99211222a92da12a 557 Gene3D G3DSA:1.10.287.950 216 518 4.9E-99 T 18-10-2018 CH53_3538 9079c7138d4b092b99211222a92da12a 557 Pfam PF02203 Tar ligand binding domain homologue 1 176 2.4E-55 T 18-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CH53_3538 9079c7138d4b092b99211222a92da12a 557 Pfam PF00672 HAMP domain 218 263 3.7E-11 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_3538 9079c7138d4b092b99211222a92da12a 557 SUPERFAMILY SSF47170 25 182 1.07E-49 T 18-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CH53_3538 9079c7138d4b092b99211222a92da12a 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 1.1E-89 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3538 9079c7138d4b092b99211222a92da12a 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 1.1E-89 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3538 9079c7138d4b092b99211222a92da12a 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 1.1E-89 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3538 9079c7138d4b092b99211222a92da12a 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.1E-89 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3538 9079c7138d4b092b99211222a92da12a 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 1.1E-89 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3538 9079c7138d4b092b99211222a92da12a 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 1.1E-89 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3538 9079c7138d4b092b99211222a92da12a 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 1.1E-89 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3538 9079c7138d4b092b99211222a92da12a 557 SUPERFAMILY SSF58104 236 520 4.97E-76 T 18-10-2018 CH53_3538 9079c7138d4b092b99211222a92da12a 557 Gene3D G3DSA:1.20.120.30 22 193 1.4E-61 T 18-10-2018 CH53_3538 9079c7138d4b092b99211222a92da12a 557 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 18-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CH53_3538 9079c7138d4b092b99211222a92da12a 557 SMART SM00283 269 516 3.5E-95 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_3538 9079c7138d4b092b99211222a92da12a 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 4.6E-59 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_2160 683bf43cb7dd69f47693f55e0df7fe26 117 SUPERFAMILY SSF142906 1 115 1.7E-37 T 18-10-2018 IPR038056 YjbR-like superfamily CH53_2160 683bf43cb7dd69f47693f55e0df7fe26 117 Gene3D G3DSA:3.90.1150.30 1 117 2.9E-41 T 18-10-2018 IPR038056 YjbR-like superfamily CH53_2160 683bf43cb7dd69f47693f55e0df7fe26 117 Pfam PF04237 YjbR 12 102 1.5E-20 T 18-10-2018 IPR007351 Uncharacterised protein YjbR CH53_149 1be49e0c5e803ca591eed60b24ae2e38 468 Gene3D G3DSA:3.10.180.80 4 451 3.8E-189 T 18-10-2018 CH53_149 1be49e0c5e803ca591eed60b24ae2e38 468 SMART SM01150 13 414 5.3E-221 T 18-10-2018 IPR009770 Domain of unknown function DUF1338 CH53_149 1be49e0c5e803ca591eed60b24ae2e38 468 Pfam PF07063 Domain of unknown function (DUF1338) 11 414 2.1E-118 T 18-10-2018 IPR009770 Domain of unknown function DUF1338 CH53_3098 dd9ac4e21bc922fe63b39671c475cd0a 677 Pfam PF02378 Phosphotransferase system, EIIC 12 324 1.2E-77 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_3098 dd9ac4e21bc922fe63b39671c475cd0a 677 Gene3D G3DSA:3.30.1360.60 417 498 4.5E-23 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_3098 dd9ac4e21bc922fe63b39671c475cd0a 677 SUPERFAMILY SSF55604 422 495 1.44E-17 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_3098 dd9ac4e21bc922fe63b39671c475cd0a 677 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 435 452 - T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_3098 dd9ac4e21bc922fe63b39671c475cd0a 677 SUPERFAMILY SSF51261 520 672 8.02E-50 T 18-10-2018 IPR011055 Duplicated hybrid motif CH53_3098 dd9ac4e21bc922fe63b39671c475cd0a 677 Pfam PF00367 phosphotransferase system, EIIB 425 457 4.3E-12 T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_3098 dd9ac4e21bc922fe63b39671c475cd0a 677 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 529 649 8.1E-46 T 18-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CH53_3098 dd9ac4e21bc922fe63b39671c475cd0a 677 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 493 1.2E-204 T 18-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 CH53_3098 dd9ac4e21bc922fe63b39671c475cd0a 677 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 384 482 8.7E-21 T 18-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CH53_3098 dd9ac4e21bc922fe63b39671c475cd0a 677 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 529 652 1.6E-45 T 18-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CH53_3098 dd9ac4e21bc922fe63b39671c475cd0a 677 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 591 603 - T 18-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CH53_3098 dd9ac4e21bc922fe63b39671c475cd0a 677 Gene3D G3DSA:2.70.70.10 517 676 7.4E-52 T 18-10-2018 IPR011055 Duplicated hybrid motif CH53_1101 231f018b31bd602737aa391a56c30a52 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 7.1E-7 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_1101 231f018b31bd602737aa391a56c30a52 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 7.1E-7 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_1101 231f018b31bd602737aa391a56c30a52 302 SMART SM00342 192 275 5.2E-24 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_1101 231f018b31bd602737aa391a56c30a52 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 271 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CH53_1101 231f018b31bd602737aa391a56c30a52 302 SUPERFAMILY SSF46689 228 280 6.27E-14 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1101 231f018b31bd602737aa391a56c30a52 302 Gene3D G3DSA:2.60.120.10 6 84 5.9E-9 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_1101 231f018b31bd602737aa391a56c30a52 302 Pfam PF12833 Helix-turn-helix domain 205 277 1.8E-22 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_1101 231f018b31bd602737aa391a56c30a52 302 SUPERFAMILY SSF51182 15 91 1.07E-11 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_1101 231f018b31bd602737aa391a56c30a52 302 Gene3D G3DSA:1.10.10.60 174 280 7.0E-27 T 18-10-2018 CH53_1101 231f018b31bd602737aa391a56c30a52 302 Hamap MF_01533 HTH-type transcriptional activator RhaR [rhaR]. 1 282 53.582 T 18-10-2018 IPR023699 Transcription activator HTH, RhaR GO:0003700|GO:0005737|GO:0019299|GO:0045893 CH53_1101 231f018b31bd602737aa391a56c30a52 302 Pfam PF02311 AraC-like ligand binding domain 23 140 9.9E-16 T 18-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CH53_131 706470ff5c17478fb59276f9abf2c062 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.2E-14 T 18-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_131 706470ff5c17478fb59276f9abf2c062 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.2E-14 T 18-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_131 706470ff5c17478fb59276f9abf2c062 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.2E-14 T 18-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_131 706470ff5c17478fb59276f9abf2c062 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.2E-14 T 18-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_131 706470ff5c17478fb59276f9abf2c062 466 SUPERFAMILY SSF55681 99 464 2.39E-96 T 18-10-2018 CH53_131 706470ff5c17478fb59276f9abf2c062 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 1.7E-83 T 18-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_131 706470ff5c17478fb59276f9abf2c062 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.5 T 18-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CH53_131 706470ff5c17478fb59276f9abf2c062 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 7.8E-12 T 18-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CH53_131 706470ff5c17478fb59276f9abf2c062 466 Gene3D G3DSA:2.40.50.140 2 104 1.9E-21 T 18-10-2018 CH53_131 706470ff5c17478fb59276f9abf2c062 466 Gene3D G3DSA:3.30.930.10 109 465 3.0E-109 T 18-10-2018 CH53_131 706470ff5c17478fb59276f9abf2c062 466 SUPERFAMILY SSF50249 15 102 5.36E-18 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_131 706470ff5c17478fb59276f9abf2c062 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 1.3E-208 T 18-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CH53_4028 7c891dc0458cb1c0458f5a4e1a46e5e6 463 Gene3D G3DSA:1.20.1740.10 1 448 2.4E-57 T 18-10-2018 CH53_4028 7c891dc0458cb1c0458f5a4e1a46e5e6 463 PIRSF PIRSF006060 1 462 2.4E-49 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_4028 7c891dc0458cb1c0458f5a4e1a46e5e6 463 Pfam PF13520 Amino acid permease 5 417 1.1E-74 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_4028 7c891dc0458cb1c0458f5a4e1a46e5e6 463 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 460 3.2E-169 T 18-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CH53_80 c1be00e91a0e06574e5eb9c9097b8bb4 608 Gene3D G3DSA:3.90.550.10 99 320 6.8E-43 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_80 c1be00e91a0e06574e5eb9c9097b8bb4 608 SUPERFAMILY SSF53448 108 456 2.39E-29 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_80 c1be00e91a0e06574e5eb9c9097b8bb4 608 Pfam PF00535 Glycosyl transferase family 2 113 305 7.8E-20 T 18-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CH53_3242 91c28833ee60c541720b890cc7f9d3b5 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 216 2.3E-22 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_3242 91c28833ee60c541720b890cc7f9d3b5 218 SUPERFAMILY SSF161098 13 201 8.76E-44 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3242 91c28833ee60c541720b890cc7f9d3b5 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 9.5E-30 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CH53_3242 91c28833ee60c541720b890cc7f9d3b5 218 Gene3D G3DSA:1.10.3720.10 1 216 3.6E-54 T 18-10-2018 IPR035906 MetI-like superfamily CH53_980 2f9e3f36ec1de30e2f43bc1ae2d8e244 256 Pfam PF01061 ABC-2 type transporter 9 218 3.8E-37 T 18-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CH53_980 2f9e3f36ec1de30e2f43bc1ae2d8e244 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.0E-5 T 18-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CH53_980 2f9e3f36ec1de30e2f43bc1ae2d8e244 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.0E-5 T 18-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CH53_980 2f9e3f36ec1de30e2f43bc1ae2d8e244 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.0E-5 T 18-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CH53_980 2f9e3f36ec1de30e2f43bc1ae2d8e244 256 PIRSF PIRSF006648 7 253 2.0E-25 T 18-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CH53_3534 13f118cfab6d87a6cfd45d3b021c4182 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 18-10-2018 IPR000540 Flagellar motor protein MotA, conserved site CH53_3534 13f118cfab6d87a6cfd45d3b021c4182 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 139 239 2.5E-11 T 18-10-2018 IPR002898 MotA/TolQ/ExbB proton channel CH53_3534 13f118cfab6d87a6cfd45d3b021c4182 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 1.9E-118 T 18-10-2018 IPR022522 Flagellar motor stator, MotA CH53_1451 a478242b7a6eb3aa28891e2f5fad55b4 178 SUPERFAMILY SSF57783 99 136 7.31E-5 T 18-10-2018 CH53_1451 a478242b7a6eb3aa28891e2f5fad55b4 178 SUPERFAMILY SSF57783 58 96 1.12E-12 T 18-10-2018 CH53_1451 a478242b7a6eb3aa28891e2f5fad55b4 178 Gene3D G3DSA:3.30.65.10 2 51 1.6E-8 T 18-10-2018 CH53_1451 a478242b7a6eb3aa28891e2f5fad55b4 178 Gene3D G3DSA:3.30.65.10 52 96 3.5E-9 T 18-10-2018 CH53_1451 a478242b7a6eb3aa28891e2f5fad55b4 178 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 60 96 9.8E-16 T 18-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CH53_1451 a478242b7a6eb3aa28891e2f5fad55b4 178 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 11 47 7.5E-14 T 18-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CH53_1451 a478242b7a6eb3aa28891e2f5fad55b4 178 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 102 140 6.1E-15 T 18-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CH53_1451 a478242b7a6eb3aa28891e2f5fad55b4 178 SUPERFAMILY SSF57783 10 48 8.33E-12 T 18-10-2018 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 658 42.554 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 TIGRFAM TIGR01273 speA: arginine decarboxylase 32 657 2.9E-269 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 SUPERFAMILY SSF50621 483 588 1.88E-8 T 18-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 Gene3D G3DSA:1.20.58.930 387 482 1.3E-232 T 18-10-2018 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 PRINTS PR01180 Arginine decarboxylase signature 514 539 1.3E-73 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 PRINTS PR01180 Arginine decarboxylase signature 93 108 1.3E-73 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 PRINTS PR01180 Arginine decarboxylase signature 567 588 1.3E-73 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 PRINTS PR01180 Arginine decarboxylase signature 221 243 1.3E-73 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 PRINTS PR01180 Arginine decarboxylase signature 348 365 1.3E-73 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 PRINTS PR01180 Arginine decarboxylase signature 489 510 1.3E-73 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 PRINTS PR01180 Arginine decarboxylase signature 197 218 1.3E-73 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 PRINTS PR01180 Arginine decarboxylase signature 117 131 1.3E-73 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 PRINTS PR01180 Arginine decarboxylase signature 171 186 1.3E-73 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 PIRSF PIRSF001336 17 659 1.1E-253 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 Gene3D G3DSA:3.20.20.10 94 370 1.3E-232 T 18-10-2018 IPR029066 PLP-binding barrel CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 264 277 8.7E-19 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 125 143 8.7E-19 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 358 377 8.7E-19 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 147 159 8.7E-19 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 567 580 8.7E-19 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 Gene3D G3DSA:2.40.37.10 39 591 1.3E-232 T 18-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 302 315 - T 18-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 125 143 - T 18-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 101 368 2.1E-67 T 18-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CH53_2601 b7e7c44ca2a0ad0a51cf360bcff01e55 659 SUPERFAMILY SSF51419 93 370 4.49E-67 T 18-10-2018 IPR029066 PLP-binding barrel CH53_3354 05ed7106d043e9a259b75970cd6377de 463 Gene3D G3DSA:3.40.50.11540 35 176 8.0E-15 T 18-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3354 05ed7106d043e9a259b75970cd6377de 463 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 273 284 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_3354 05ed7106d043e9a259b75970cd6377de 463 Gene3D G3DSA:3.30.70.20 266 334 2.0E-5 T 18-10-2018 CH53_3354 05ed7106d043e9a259b75970cd6377de 463 Pfam PF13375 RnfC Barrel sandwich hybrid domain 394 456 2.5E-18 T 18-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain CH53_3354 05ed7106d043e9a259b75970cd6377de 463 PIRSF PIRSF036408 21 460 3.3E-184 T 18-10-2018 IPR017054 Propanediol utilization protein, PduS, predicted CH53_3354 05ed7106d043e9a259b75970cd6377de 463 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 30 169 2.5E-38 T 18-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3354 05ed7106d043e9a259b75970cd6377de 463 SUPERFAMILY SSF46548 223 350 2.62E-12 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CH53_3354 05ed7106d043e9a259b75970cd6377de 463 Gene3D G3DSA:3.10.20.600 179 243 2.9E-5 T 18-10-2018 CH53_3354 05ed7106d043e9a259b75970cd6377de 463 SUPERFAMILY SSF142019 18 187 3.92E-45 T 18-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3354 05ed7106d043e9a259b75970cd6377de 463 Pfam PF13534 4Fe-4S dicluster domain 273 333 8.0E-9 T 18-10-2018 CH53_3354 05ed7106d043e9a259b75970cd6377de 463 SUPERFAMILY SSF142984 181 249 2.62E-14 T 18-10-2018 CH53_3354 05ed7106d043e9a259b75970cd6377de 463 Pfam PF10531 SLBB domain 183 228 2.1E-11 T 18-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_745 d248c5ca756848e81f8a90224e096c0d 337 SMART SM00342 245 328 1.2E-19 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_745 d248c5ca756848e81f8a90224e096c0d 337 Pfam PF12833 Helix-turn-helix domain 251 329 2.0E-21 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_745 d248c5ca756848e81f8a90224e096c0d 337 SUPERFAMILY SSF46689 281 330 5.38E-12 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_745 d248c5ca756848e81f8a90224e096c0d 337 Gene3D G3DSA:1.10.10.60 231 278 2.5E-8 T 18-10-2018 CH53_745 d248c5ca756848e81f8a90224e096c0d 337 Gene3D G3DSA:1.10.10.60 279 331 2.9E-16 T 18-10-2018 CH53_1119 bdaa4fff12f6ef9b207e3edc09cc2709 423 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 6 79 1.7E-22 T 18-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CH53_1119 bdaa4fff12f6ef9b207e3edc09cc2709 423 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 199 420 9.8E-76 T 18-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CH53_1119 bdaa4fff12f6ef9b207e3edc09cc2709 423 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 2 420 1.1E-153 T 18-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CH53_1119 bdaa4fff12f6ef9b207e3edc09cc2709 423 Pfam PF07670 Nucleoside recognition 97 193 5.4E-9 T 18-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CH53_4261 420c7daa88855119c3c7a72c061599c1 253 Gene3D G3DSA:3.40.50.720 1 253 3.7E-83 T 18-10-2018 CH53_4261 420c7daa88855119c3c7a72c061599c1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.6E-41 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4261 420c7daa88855119c3c7a72c061599c1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.6E-41 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4261 420c7daa88855119c3c7a72c061599c1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.6E-41 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4261 420c7daa88855119c3c7a72c061599c1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.6E-41 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4261 420c7daa88855119c3c7a72c061599c1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.6E-41 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4261 420c7daa88855119c3c7a72c061599c1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 4.6E-41 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4261 420c7daa88855119c3c7a72c061599c1 253 SUPERFAMILY SSF51735 9 252 4.71E-78 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_4261 420c7daa88855119c3c7a72c061599c1 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 8.4E-14 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4261 420c7daa88855119c3c7a72c061599c1 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.4E-14 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4261 420c7daa88855119c3c7a72c061599c1 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.4E-14 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_4261 420c7daa88855119c3c7a72c061599c1 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 2.1E-136 T 18-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 CH53_4261 420c7daa88855119c3c7a72c061599c1 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CH53_4261 420c7daa88855119c3c7a72c061599c1 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 2.1E-58 T 18-10-2018 CH53_335 80cacef8493f477013983887382fc0ad 384 SUPERFAMILY SSF103473 22 377 1.19E-31 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_335 80cacef8493f477013983887382fc0ad 384 Gene3D G3DSA:1.20.1250.20 200 382 3.5E-19 T 18-10-2018 CH53_335 80cacef8493f477013983887382fc0ad 384 Gene3D G3DSA:1.20.1250.20 18 189 2.0E-12 T 18-10-2018 CH53_335 80cacef8493f477013983887382fc0ad 384 Pfam PF07690 Major Facilitator Superfamily 22 324 3.2E-13 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_1267 37e09116329ce75b373a6d085873dba5 167 Gene3D G3DSA:3.40.630.30 1 167 5.2E-48 T 18-10-2018 CH53_1267 37e09116329ce75b373a6d085873dba5 167 SUPERFAMILY SSF55729 3 158 3.24E-22 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_1267 37e09116329ce75b373a6d085873dba5 167 Pfam PF13527 Acetyltransferase (GNAT) domain 10 123 4.2E-7 T 18-10-2018 CH53_316 5617b60efa59e24b3e1ebe7409b410d6 441 Pfam PF00375 Sodium:dicarboxylate symporter family 6 402 7.4E-105 T 18-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CH53_316 5617b60efa59e24b3e1ebe7409b410d6 441 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.0E-40 T 18-10-2018 CH53_316 5617b60efa59e24b3e1ebe7409b410d6 441 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 1.0E-40 T 18-10-2018 CH53_316 5617b60efa59e24b3e1ebe7409b410d6 441 PRINTS PR00173 Glutamate-aspartate symporter signature 356 376 1.0E-40 T 18-10-2018 CH53_316 5617b60efa59e24b3e1ebe7409b410d6 441 PRINTS PR00173 Glutamate-aspartate symporter signature 80 105 1.0E-40 T 18-10-2018 CH53_316 5617b60efa59e24b3e1ebe7409b410d6 441 PRINTS PR00173 Glutamate-aspartate symporter signature 50 70 1.0E-40 T 18-10-2018 CH53_316 5617b60efa59e24b3e1ebe7409b410d6 441 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 1.0E-40 T 18-10-2018 CH53_316 5617b60efa59e24b3e1ebe7409b410d6 441 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 1.0E-40 T 18-10-2018 CH53_316 5617b60efa59e24b3e1ebe7409b410d6 441 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 1.0E-40 T 18-10-2018 CH53_316 5617b60efa59e24b3e1ebe7409b410d6 441 Gene3D G3DSA:1.10.3860.10 1 412 6.0E-115 T 18-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CH53_316 5617b60efa59e24b3e1ebe7409b410d6 441 SUPERFAMILY SSF118215 6 403 1.96E-107 T 18-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CH53_4226 8164050997e27e547bbd0c4c1c85e332 101 SUPERFAMILY SSF57716 22 56 6.99E-8 T 18-10-2018 CH53_4226 8164050997e27e547bbd0c4c1c85e332 101 Pfam PF06689 ClpX C4-type zinc finger 23 58 5.9E-15 T 18-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CH53_4226 8164050997e27e547bbd0c4c1c85e332 101 Gene3D G3DSA:3.30.50.30 14 59 1.1E-16 T 18-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily CH53_4226 8164050997e27e547bbd0c4c1c85e332 101 SMART SM00994 21 59 5.1E-15 T 18-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CH53_421 89967e47a9c087714573cc8a869bf095 686 ProSitePatterns PS00194 Thioredoxin family active site. 590 608 - T 18-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CH53_421 89967e47a9c087714573cc8a869bf095 686 Pfam PF11412 Disulphide bond corrector protein DsbC 42 146 7.4E-18 T 18-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CH53_421 89967e47a9c087714573cc8a869bf095 686 Pfam PF13899 Thioredoxin-like 571 651 9.3E-12 T 18-10-2018 CH53_421 89967e47a9c087714573cc8a869bf095 686 Gene3D G3DSA:3.40.30.10 560 664 3.3E-10 T 18-10-2018 CH53_421 89967e47a9c087714573cc8a869bf095 686 SUPERFAMILY SSF52833 563 679 4.58E-12 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_3818 10634e95f6317d72a74c48e029405b16 201 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 28 197 1.3E-61 T 18-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CH53_3818 10634e95f6317d72a74c48e029405b16 201 Pfam PF03843 Outer membrane lipoprotein Slp family 30 177 4.5E-47 T 18-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CH53_3818 10634e95f6317d72a74c48e029405b16 201 PIRSF PIRSF004982 17 197 4.9E-48 T 18-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CH53_2908 c1a4cf7ca46a82f2fbc3ce4c327d3472 296 Pfam PF00535 Glycosyl transferase family 2 5 126 4.9E-27 T 18-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CH53_2908 c1a4cf7ca46a82f2fbc3ce4c327d3472 296 SUPERFAMILY SSF53448 4 211 2.72E-35 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_2908 c1a4cf7ca46a82f2fbc3ce4c327d3472 296 Gene3D G3DSA:3.90.550.10 1 241 7.1E-35 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 1.4E-70 T 18-10-2018 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 1.4E-70 T 18-10-2018 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.4E-70 T 18-10-2018 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 1.4E-70 T 18-10-2018 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 1.4E-70 T 18-10-2018 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.4E-70 T 18-10-2018 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 1.4E-70 T 18-10-2018 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.4E-70 T 18-10-2018 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 1.4E-70 T 18-10-2018 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 793 2.8E-29 T 18-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 SUPERFAMILY SSF55874 4 220 2.1E-77 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 Gene3D G3DSA:3.40.50.670 705 802 7.4E-26 T 18-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 SUPERFAMILY SSF54211 221 392 2.28E-61 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 SMART SM00433 35 797 2.4E-276 T 18-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 109.087 T 18-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 Gene3D G3DSA:3.10.20.690 592 683 2.2E-37 T 18-10-2018 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 Gene3D G3DSA:3.30.565.10 1 220 3.9E-96 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 18-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 Pfam PF01751 Toprim domain 419 531 5.2E-18 T 18-10-2018 IPR006171 TOPRIM domain CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 Gene3D G3DSA:3.30.230.10 221 392 2.6E-74 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 SUPERFAMILY SSF56719 394 795 2.88E-86 T 18-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 Gene3D G3DSA:3.40.50.670 398 569 2.9E-74 T 18-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 8.2E-78 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 8.2E-78 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 8.2E-78 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 8.2E-78 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 8.2E-78 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 8.2E-78 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 8.2E-78 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 8.2E-78 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 8.2E-78 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 8.2E-78 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 18-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 SMART SM00387 31 175 1.3E-30 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 Pfam PF00204 DNA gyrase B 221 390 8.2E-59 T 18-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CH53_1728 e69c4e2bf88f902cca935a3e65df07ca 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 1.4E-21 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_869 6875919f304a3a064e0ef13ed929b577 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 265 1.1E-120 T 18-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CH53_869 6875919f304a3a064e0ef13ed929b577 265 Pfam PF03609 PTS system sorbose-specific iic component 5 237 1.5E-72 T 18-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 Gene3D G3DSA:1.20.120.620 397 503 4.9E-39 T 18-10-2018 IPR038318 KdpD, transmembrane domain superfamily CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 Pfam PF13493 Domain of unknown function (DUF4118) 404 508 2.5E-30 T 18-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 Pfam PF13492 GAF domain 573 646 5.4E-11 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 SMART SM00387 776 886 4.6E-31 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 Gene3D G3DSA:1.10.287.130 655 734 6.1E-14 T 18-10-2018 CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 SUPERFAMILY SSF52402 254 361 2.43E-7 T 18-10-2018 CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 Gene3D G3DSA:3.30.565.10 735 894 1.5E-35 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 SUPERFAMILY SSF55781 510 658 7.85E-6 T 18-10-2018 CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 SUPERFAMILY SSF55874 721 886 2.49E-41 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 PRINTS PR00344 Bacterial sensor protein C-terminal signature 813 827 2.1E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 PRINTS PR00344 Bacterial sensor protein C-terminal signature 831 841 2.1E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 PRINTS PR00344 Bacterial sensor protein C-terminal signature 846 864 2.1E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 PRINTS PR00344 Bacterial sensor protein C-terminal signature 870 883 2.1E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 231 1.0E-98 T 18-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 Gene3D G3DSA:3.40.50.300 20 230 9.2E-102 T 18-10-2018 CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 Gene3D G3DSA:3.40.50.620 238 364 1.3E-5 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 SUPERFAMILY SSF47384 661 733 2.55E-14 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 SMART SM00388 665 732 7.3E-14 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 Gene3D G3DSA:3.30.450.40 512 654 5.3E-35 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 778 886 1.2E-21 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_3122 d1c045d756f0bd7f1cb0472af37ccf77 904 Pfam PF00512 His Kinase A (phospho-acceptor) domain 666 732 2.2E-11 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_2902 d8e419eb06f16b1cc498f3d5a5daabc3 201 Pfam PF13662 Toprim domain 82 172 1.1E-20 T 18-10-2018 IPR006171 TOPRIM domain CH53_2902 d8e419eb06f16b1cc498f3d5a5daabc3 201 Gene3D G3DSA:1.10.8.420 1 53 1.9E-18 T 18-10-2018 CH53_2902 d8e419eb06f16b1cc498f3d5a5daabc3 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 2.7E-80 T 18-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CH53_2902 d8e419eb06f16b1cc498f3d5a5daabc3 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.739 T 18-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CH53_2902 d8e419eb06f16b1cc498f3d5a5daabc3 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 18-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 CH53_2902 d8e419eb06f16b1cc498f3d5a5daabc3 201 SUPERFAMILY SSF111304 2 199 2.88E-70 T 18-10-2018 IPR023627 Recombination protein RecR CH53_2902 d8e419eb06f16b1cc498f3d5a5daabc3 201 Pfam PF02132 RecR protein 41 77 2.3E-14 T 18-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger CH53_2902 d8e419eb06f16b1cc498f3d5a5daabc3 201 SMART SM00493 81 166 1.6E-17 T 18-10-2018 IPR006171 TOPRIM domain CH53_2902 d8e419eb06f16b1cc498f3d5a5daabc3 201 Gene3D G3DSA:3.40.1360.10 77 199 4.7E-38 T 18-10-2018 CH53_3250 d8288c3daf1089ca46ccb17ccce8d517 312 SUPERFAMILY SSF161111 16 223 4.84E-35 T 18-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CH53_3250 d8288c3daf1089ca46ccb17ccce8d517 312 Gene3D G3DSA:1.20.1510.10 19 223 3.7E-24 T 18-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CH53_3250 d8288c3daf1089ca46ccb17ccce8d517 312 Pfam PF01545 Cation efflux family 22 221 1.1E-34 T 18-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CH53_2018 fdb0bb24a563f28b83fe123eca4c6547 403 Pfam PF13183 4Fe-4S dicluster domain 7 71 8.4E-10 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_2018 fdb0bb24a563f28b83fe123eca4c6547 403 Pfam PF02754 Cysteine-rich domain 300 383 1.2E-13 T 18-10-2018 IPR004017 Cysteine-rich domain CH53_2018 fdb0bb24a563f28b83fe123eca4c6547 403 Pfam PF02754 Cysteine-rich domain 164 250 8.9E-14 T 18-10-2018 IPR004017 Cysteine-rich domain CH53_2018 fdb0bb24a563f28b83fe123eca4c6547 403 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 4 402 1.7E-231 T 18-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 CH53_2018 fdb0bb24a563f28b83fe123eca4c6547 403 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 57 68 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_2018 fdb0bb24a563f28b83fe123eca4c6547 403 SUPERFAMILY SSF46548 7 82 2.44E-15 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CH53_2018 fdb0bb24a563f28b83fe123eca4c6547 403 Gene3D G3DSA:1.10.1060.10 1 91 9.8E-9 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CH53_1997 7c255835fbf7f342eb9a8b9872a87eb0 234 Pfam PF04340 Protein of unknown function, DUF484 13 231 1.3E-72 T 18-10-2018 IPR007435 Protein of unknown function DUF484 CH53_1997 7c255835fbf7f342eb9a8b9872a87eb0 234 Gene3D G3DSA:3.30.450.40 49 232 4.5E-35 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_532 a07487d0caa95e02855762aa0250fc60 258 Pfam PF01061 ABC-2 type transporter 13 218 5.2E-18 T 18-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CH53_532 a07487d0caa95e02855762aa0250fc60 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 32 53 3.5E-35 T 18-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CH53_532 a07487d0caa95e02855762aa0250fc60 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 63 85 3.5E-35 T 18-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CH53_532 a07487d0caa95e02855762aa0250fc60 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 106 131 3.5E-35 T 18-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CH53_532 a07487d0caa95e02855762aa0250fc60 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 140 164 3.5E-35 T 18-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CH53_532 a07487d0caa95e02855762aa0250fc60 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 177 196 3.5E-35 T 18-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CH53_532 a07487d0caa95e02855762aa0250fc60 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 3.5E-35 T 18-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CH53_532 a07487d0caa95e02855762aa0250fc60 258 PIRSF PIRSF006648 3 253 4.4E-16 T 18-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CH53_934 19b8a05865e69cfb5be0537313d11f61 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_934 19b8a05865e69cfb5be0537313d11f61 244 SMART SM00382 26 213 4.5E-17 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_934 19b8a05865e69cfb5be0537313d11f61 244 SUPERFAMILY SSF52540 1 235 3.1E-79 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_934 19b8a05865e69cfb5be0537313d11f61 244 PIRSF PIRSF039085 1 241 2.1E-119 T 18-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CH53_934 19b8a05865e69cfb5be0537313d11f61 244 Gene3D G3DSA:3.40.50.300 1 240 6.9E-79 T 18-10-2018 CH53_934 19b8a05865e69cfb5be0537313d11f61 244 Pfam PF00005 ABC transporter 17 165 1.5E-35 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3049 e96e998c91a80786dd460b1a3f893450 64 Hamap MF_00525 Surface composition regulator [glgS]. 5 64 18.565 T 18-10-2018 IPR015065 Surface composition regulator CH53_3049 e96e998c91a80786dd460b1a3f893450 64 Pfam PF08971 Glycogen synthesis protein 11 58 3.2E-10 T 18-10-2018 IPR015065 Surface composition regulator CH53_3049 e96e998c91a80786dd460b1a3f893450 64 Gene3D G3DSA:1.20.58.250 5 64 5.9E-9 T 18-10-2018 IPR036745 DNA polymerase III-theta superfamily GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_3049 e96e998c91a80786dd460b1a3f893450 64 SUPERFAMILY SSF46575 14 59 7.72E-9 T 18-10-2018 CH53_1439 8137cfdc9aca2a237a9126d561913aed 652 Gene3D G3DSA:3.40.50.12780 52 515 6.2E-104 T 18-10-2018 CH53_1439 8137cfdc9aca2a237a9126d561913aed 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 18-10-2018 IPR020845 AMP-binding, conserved site CH53_1439 8137cfdc9aca2a237a9126d561913aed 652 Pfam PF00501 AMP-binding enzyme 83 522 3.7E-91 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CH53_1439 8137cfdc9aca2a237a9126d561913aed 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 5.3E-19 T 18-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CH53_1439 8137cfdc9aca2a237a9126d561913aed 652 SUPERFAMILY SSF56801 9 643 1.02E-189 T 18-10-2018 CH53_1439 8137cfdc9aca2a237a9126d561913aed 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 18-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CH53_1439 8137cfdc9aca2a237a9126d561913aed 652 Gene3D G3DSA:3.30.300.30 518 652 9.0E-34 T 18-10-2018 CH53_1439 8137cfdc9aca2a237a9126d561913aed 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 6.4E-26 T 18-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CH53_1439 8137cfdc9aca2a237a9126d561913aed 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 53.262 T 18-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CH53_312 205e69ddc1f9b82de396b5b82371275c 481 Pfam PF06368 Methylaspartate mutase E chain (MutE) 43 481 3.3E-211 T 18-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CH53_312 205e69ddc1f9b82de396b5b82371275c 481 TIGRFAM TIGR01503 MthylAspMut_E: methylaspartate mutase, E subunit 3 481 1.2E-238 T 18-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CH53_312 205e69ddc1f9b82de396b5b82371275c 481 Gene3D G3DSA:3.90.970.10 417 481 3.1E-27 T 18-10-2018 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily GO:0016866|GO:0019670|GO:0031419 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CH53_312 205e69ddc1f9b82de396b5b82371275c 481 Gene3D G3DSA:3.20.20.240 1 416 8.2E-171 T 18-10-2018 CH53_312 205e69ddc1f9b82de396b5b82371275c 481 PIRSF PIRSF001495 1 481 9.2E-229 T 18-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CH53_312 205e69ddc1f9b82de396b5b82371275c 481 SUPERFAMILY SSF51703 1 481 6.28E-199 T 18-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CH53_312 205e69ddc1f9b82de396b5b82371275c 481 Hamap MF_01923 Glutamate mutase epsilon subunit [glmE]. 2 481 53.751 T 18-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CH53_1805 de9d990fc55e8faf31c83d2114710a1b 188 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 182 17.469 T 18-10-2018 IPR007336 Der GTPase activator GO:0005096 CH53_1805 de9d990fc55e8faf31c83d2114710a1b 188 Pfam PF04220 Der GTPase activator (YihI) 20 179 2.5E-57 T 18-10-2018 IPR007336 Der GTPase activator GO:0005096 CH53_4262 a9484cdfdb1edc5b2c1d6b2b25542911 555 Pfam PF06917 Periplasmic pectate lyase 12 537 1.5E-120 T 18-10-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 CH53_4262 a9484cdfdb1edc5b2c1d6b2b25542911 555 PIRSF PIRSF001432 1 555 2.2E-284 T 18-10-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 CH53_4262 a9484cdfdb1edc5b2c1d6b2b25542911 555 Gene3D G3DSA:1.50.10.20 16 309 3.3E-96 T 18-10-2018 CH53_4262 a9484cdfdb1edc5b2c1d6b2b25542911 555 Gene3D G3DSA:1.50.10.20 367 519 1.7E-28 T 18-10-2018 CH53_2515 745aa8ebe18bc158b95cab6829072ca8 404 SUPERFAMILY SSF56796 31 403 2.22E-112 T 18-10-2018 CH53_2515 745aa8ebe18bc158b95cab6829072ca8 404 Pfam PF00465 Iron-containing alcohol dehydrogenase 37 397 2.3E-110 T 18-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CH53_2515 745aa8ebe18bc158b95cab6829072ca8 404 Gene3D G3DSA:1.20.1090.10 214 404 1.1E-62 T 18-10-2018 CH53_2515 745aa8ebe18bc158b95cab6829072ca8 404 Gene3D G3DSA:3.40.50.1970 20 212 2.6E-48 T 18-10-2018 CH53_2515 745aa8ebe18bc158b95cab6829072ca8 404 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 288 308 - T 18-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CH53_2515 745aa8ebe18bc158b95cab6829072ca8 404 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 201 229 - T 18-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CH53_968 512edd44d1387f1c8812333659484c39 814 Pfam PF04408 Helicase associated domain (HA2) 389 470 2.3E-12 T 18-10-2018 IPR007502 Helicase-associated domain GO:0004386 CH53_968 512edd44d1387f1c8812333659484c39 814 Pfam PF08482 ATP-dependent helicase C-terminal 667 799 7.8E-52 T 18-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal CH53_968 512edd44d1387f1c8812333659484c39 814 Pfam PF00270 DEAD/DEAH box helicase 13 163 8.1E-10 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CH53_968 512edd44d1387f1c8812333659484c39 814 SMART SM00487 2 189 3.4E-18 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CH53_968 512edd44d1387f1c8812333659484c39 814 SMART SM00847 388 479 8.7E-16 T 18-10-2018 IPR007502 Helicase-associated domain GO:0004386 CH53_968 512edd44d1387f1c8812333659484c39 814 Gene3D G3DSA:3.40.50.300 180 346 3.7E-50 T 18-10-2018 CH53_968 512edd44d1387f1c8812333659484c39 814 Gene3D G3DSA:1.20.120.1080 371 468 7.6E-10 T 18-10-2018 CH53_968 512edd44d1387f1c8812333659484c39 814 Gene3D G3DSA:3.40.50.300 1 179 1.1E-53 T 18-10-2018 CH53_968 512edd44d1387f1c8812333659484c39 814 Pfam PF00271 Helicase conserved C-terminal domain 205 327 7.6E-13 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_968 512edd44d1387f1c8812333659484c39 814 SUPERFAMILY SSF52540 13 339 6.13E-52 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_968 512edd44d1387f1c8812333659484c39 814 SMART SM00490 223 328 4.3E-16 T 18-10-2018 IPR001650 Helicase, C-terminal CH53_968 512edd44d1387f1c8812333659484c39 814 PIRSF PIRSF005496 1 813 0.0 T 18-10-2018 CH53_968 512edd44d1387f1c8812333659484c39 814 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 811 0.0 T 18-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 CH53_4246 69e6c95198ddfc63c6f5f7a36a5dd616 220 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 75 103 - T 18-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CH53_4246 69e6c95198ddfc63c6f5f7a36a5dd616 220 Pfam PF01464 Transglycosylase SLT domain 57 182 3.7E-28 T 18-10-2018 IPR008258 Transglycosylase SLT domain 1 CH53_4246 69e6c95198ddfc63c6f5f7a36a5dd616 220 Gene3D G3DSA:1.10.530.10 47 218 1.1E-44 T 18-10-2018 CH53_4246 69e6c95198ddfc63c6f5f7a36a5dd616 220 SUPERFAMILY SSF53955 53 217 1.77E-29 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily CH53_1335 248f160b7f6bf4a4ba1df65f1a760712 334 Gene3D G3DSA:3.30.479.30 53 231 2.9E-15 T 18-10-2018 CH53_1335 248f160b7f6bf4a4ba1df65f1a760712 334 Pfam PF01145 SPFH domain / Band 7 family 22 241 2.8E-34 T 18-10-2018 IPR001107 Band 7 domain CH53_1335 248f160b7f6bf4a4ba1df65f1a760712 334 TIGRFAM TIGR01932 hflC: HflC protein 1 325 2.0E-139 T 18-10-2018 IPR010200 HflC GO:0016021|GO:0052547 CH53_1335 248f160b7f6bf4a4ba1df65f1a760712 334 SMART SM00244 18 225 1.3E-41 T 18-10-2018 IPR001107 Band 7 domain CH53_1335 248f160b7f6bf4a4ba1df65f1a760712 334 PIRSF PIRSF005651 1 334 1.1E-106 T 18-10-2018 IPR010200 HflC GO:0016021|GO:0052547 CH53_1335 248f160b7f6bf4a4ba1df65f1a760712 334 SUPERFAMILY SSF117892 56 231 1.96E-22 T 18-10-2018 IPR036013 Band 7/SPFH domain superfamily CH53_1441 66c5be67b9a11898ef64f96ab7b807cd 551 Gene3D G3DSA:1.20.1730.10 51 549 9.5E-63 T 18-10-2018 IPR038377 Sodium/glucose symporter superfamily CH53_1441 66c5be67b9a11898ef64f96ab7b807cd 551 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 179 204 - T 18-10-2018 IPR018212 Sodium/solute symporter, conserved site CH53_1441 66c5be67b9a11898ef64f96ab7b807cd 551 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 452 472 - T 18-10-2018 IPR018212 Sodium/solute symporter, conserved site CH53_1441 66c5be67b9a11898ef64f96ab7b807cd 551 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 2 551 51.259 T 18-10-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 CH53_1441 66c5be67b9a11898ef64f96ab7b807cd 551 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 4 551 0.0 T 18-10-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 CH53_1441 66c5be67b9a11898ef64f96ab7b807cd 551 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 64 468 2.2E-61 T 18-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CH53_1441 66c5be67b9a11898ef64f96ab7b807cd 551 Pfam PF00474 Sodium:solute symporter family 64 470 2.7E-128 T 18-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CH53_1772 f14239900511d4de00288b0d73119c8b 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 2.2E-51 T 18-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1772 f14239900511d4de00288b0d73119c8b 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 19.237 T 18-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1772 f14239900511d4de00288b0d73119c8b 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.5E-63 T 18-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1772 f14239900511d4de00288b0d73119c8b 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.1E-28 T 18-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1772 f14239900511d4de00288b0d73119c8b 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.1E-28 T 18-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1772 f14239900511d4de00288b0d73119c8b 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.1E-28 T 18-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1772 f14239900511d4de00288b0d73119c8b 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.1E-28 T 18-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1772 f14239900511d4de00288b0d73119c8b 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.1E-28 T 18-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1772 f14239900511d4de00288b0d73119c8b 177 Gene3D G3DSA:1.10.520.20 2 106 1.4E-38 T 18-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1772 f14239900511d4de00288b0d73119c8b 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 18-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1772 f14239900511d4de00288b0d73119c8b 177 SUPERFAMILY SSF47928 3 104 4.18E-28 T 18-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CH53_1118 36096160432ac75e27dbfefb3411641b 265 SMART SM01133 16 252 8.0E-78 T 18-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CH53_1118 36096160432ac75e27dbfefb3411641b 265 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 7 265 52.786 T 18-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 CH53_1118 36096160432ac75e27dbfefb3411641b 265 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 17 238 5.4E-81 T 18-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CH53_1118 36096160432ac75e27dbfefb3411641b 265 Gene3D G3DSA:3.20.20.70 7 265 8.5E-102 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_1118 36096160432ac75e27dbfefb3411641b 265 Pfam PF01791 DeoC/LacD family aldolase 18 250 1.7E-46 T 18-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CH53_1118 36096160432ac75e27dbfefb3411641b 265 SUPERFAMILY SSF51569 13 252 8.48E-81 T 18-10-2018 CH53_1118 36096160432ac75e27dbfefb3411641b 265 PIRSF PIRSF001357 11 261 6.9E-79 T 18-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CH53_3234 5224c72802f27322a0e510b996d44155 296 SUPERFAMILY SSF103481 45 146 9.81E-12 T 18-10-2018 CH53_3234 5224c72802f27322a0e510b996d44155 296 SUPERFAMILY SSF103481 187 290 6.02E-12 T 18-10-2018 CH53_3234 5224c72802f27322a0e510b996d44155 296 Pfam PF00892 EamA-like transporter family 16 144 6.6E-21 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_3234 5224c72802f27322a0e510b996d44155 296 Pfam PF00892 EamA-like transporter family 154 287 5.0E-17 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_3615 4f79a723f70b5cba8bf87315c07fec48 495 Gene3D G3DSA:2.40.30.140 104 209 8.4E-145 T 18-10-2018 CH53_3615 4f79a723f70b5cba8bf87315c07fec48 495 SMART SM00642 4 402 3.3E-54 T 18-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CH53_3615 4f79a723f70b5cba8bf87315c07fec48 495 SUPERFAMILY SSF51445 6 404 7.38E-95 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_3615 4f79a723f70b5cba8bf87315c07fec48 495 Gene3D G3DSA:3.20.20.80 5 374 8.4E-145 T 18-10-2018 CH53_3615 4f79a723f70b5cba8bf87315c07fec48 495 PIRSF PIRSF001021 1 494 7.3E-201 T 18-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 CH53_3615 4f79a723f70b5cba8bf87315c07fec48 495 Pfam PF00128 Alpha amylase, catalytic domain 24 369 1.4E-28 T 18-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CH53_3615 4f79a723f70b5cba8bf87315c07fec48 495 SUPERFAMILY SSF51011 405 491 1.54E-27 T 18-10-2018 CH53_3615 4f79a723f70b5cba8bf87315c07fec48 495 Gene3D G3DSA:2.60.40.1180 408 493 1.1E-24 T 18-10-2018 IPR013780 Glycosyl hydrolase, all-beta CH53_2357 fe41bb8628219ca133172e9eca9abcea 146 Gene3D G3DSA:3.40.50.510 1 144 1.2E-36 T 18-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CH53_2357 fe41bb8628219ca133172e9eca9abcea 146 SUPERFAMILY SSF53062 1 128 2.49E-34 T 18-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CH53_2357 fe41bb8628219ca133172e9eca9abcea 146 Pfam PF03610 PTS system fructose IIA component 4 116 3.8E-27 T 18-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CH53_4215 4ac745a79200a6e8baf4201887d04511 171 SUPERFAMILY SSF53098 4 168 2.13E-16 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_4215 4ac745a79200a6e8baf4201887d04511 171 Gene3D G3DSA:3.30.420.10 2 171 4.7E-11 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CH53_4215 4ac745a79200a6e8baf4201887d04511 171 Pfam PF16473 3' exoribonuclease, RNase T-like 3 165 1.6E-40 T 18-10-2018 IPR033390 3'-5' exoribonuclease Rv2179c-like domain CH53_2195 1cac917c6366f0c03c3e37da56bb3d10 150 SUPERFAMILY SSF52304 6 148 5.63E-62 T 18-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CH53_2195 1cac917c6366f0c03c3e37da56bb3d10 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 74.947 T 18-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CH53_2195 1cac917c6366f0c03c3e37da56bb3d10 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 1.8E-61 T 18-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CH53_2195 1cac917c6366f0c03c3e37da56bb3d10 150 PIRSF PIRSF001399 3 149 3.3E-59 T 18-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CH53_2195 1cac917c6366f0c03c3e37da56bb3d10 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 18-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CH53_2195 1cac917c6366f0c03c3e37da56bb3d10 150 Gene3D G3DSA:3.40.50.9100 1 150 5.3E-69 T 18-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CH53_2195 1cac917c6366f0c03c3e37da56bb3d10 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 150 6.0E-71 T 18-10-2018 CH53_2195 1cac917c6366f0c03c3e37da56bb3d10 150 Pfam PF01220 Dehydroquinase class II 7 142 2.9E-61 T 18-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CH53_2694 9160e91f951667bd3928abc1e24dc618 1205 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 9 1181 0.0 T 18-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CH53_2694 9160e91f951667bd3928abc1e24dc618 1205 Gene3D G3DSA:1.10.3170.10 156 349 4.9E-164 T 18-10-2018 CH53_2694 9160e91f951667bd3928abc1e24dc618 1205 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 436 1.0E-60 T 18-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CH53_2694 9160e91f951667bd3928abc1e24dc618 1205 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 7 1182 23.099 T 18-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CH53_2694 9160e91f951667bd3928abc1e24dc618 1205 SUPERFAMILY SSF52980 904 1183 5.04E-91 T 18-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CH53_2694 9160e91f951667bd3928abc1e24dc618 1205 Gene3D G3DSA:1.10.486.10 583 728 6.4E-171 T 18-10-2018 CH53_2694 9160e91f951667bd3928abc1e24dc618 1205 Pfam PF13361 UvrD-like helicase C-terminal domain 443 809 8.1E-19 T 18-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CH53_2694 9160e91f951667bd3928abc1e24dc618 1205 Gene3D G3DSA:3.90.320.10 892 1187 2.8E-113 T 18-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal CH53_2694 9160e91f951667bd3928abc1e24dc618 1205 SUPERFAMILY SSF52540 4 819 7.16E-109 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2694 9160e91f951667bd3928abc1e24dc618 1205 Gene3D G3DSA:3.40.50.300 445 846 6.4E-171 T 18-10-2018 CH53_2694 9160e91f951667bd3928abc1e24dc618 1205 Gene3D G3DSA:3.40.50.300 9 436 4.9E-164 T 18-10-2018 CH53_327 2da6080e7df2daabdac0cbb17d77c7fe 354 SUPERFAMILY SSF51735 4 351 5.04E-37 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_327 2da6080e7df2daabdac0cbb17d77c7fe 354 Gene3D G3DSA:3.40.50.720 3 354 4.8E-106 T 18-10-2018 CH53_327 2da6080e7df2daabdac0cbb17d77c7fe 354 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 222 4.7E-13 T 18-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CH53_408 2ba920aaf74b1696a37dd73708e10312 243 Hamap MF_02022 Cell division protein DedD [dedD]. 14 241 25.299 T 18-10-2018 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 CH53_408 2ba920aaf74b1696a37dd73708e10312 243 Pfam PF05036 Sporulation related domain 164 236 3.6E-10 T 18-10-2018 IPR007730 Sporulation-like domain GO:0042834 CH53_408 2ba920aaf74b1696a37dd73708e10312 243 Gene3D G3DSA:3.30.70.1070 159 236 8.3E-6 T 18-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CH53_408 2ba920aaf74b1696a37dd73708e10312 243 SUPERFAMILY SSF110997 164 236 8.76E-13 T 18-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CH53_960 af0a21c3922d03c67e3bc39835af8318 114 Gene3D G3DSA:2.60.300.12 9 114 3.4E-34 T 18-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CH53_960 af0a21c3922d03c67e3bc39835af8318 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 4.9E-39 T 18-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CH53_960 af0a21c3922d03c67e3bc39835af8318 114 SUPERFAMILY SSF89360 8 103 5.89E-31 T 18-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CH53_960 af0a21c3922d03c67e3bc39835af8318 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 18-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CH53_960 af0a21c3922d03c67e3bc39835af8318 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.592 T 18-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 CH53_960 af0a21c3922d03c67e3bc39835af8318 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 1.9E-20 T 18-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CH53_192 242b1895df0f29bfff195a9ae02c4114 243 Gene3D G3DSA:3.40.190.10 108 201 8.3E-85 T 18-10-2018 CH53_192 242b1895df0f29bfff195a9ae02c4114 243 SUPERFAMILY SSF53850 1 242 1.94E-73 T 18-10-2018 CH53_192 242b1895df0f29bfff195a9ae02c4114 243 SMART SM00079 22 243 1.9E-5 T 18-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CH53_192 242b1895df0f29bfff195a9ae02c4114 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 18-10-2018 IPR018313 Solute-binding protein family 3, conserved site CH53_192 242b1895df0f29bfff195a9ae02c4114 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 5 241 1.8E-90 T 18-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 CH53_192 242b1895df0f29bfff195a9ae02c4114 243 SMART SM00062 22 241 3.1E-86 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_192 242b1895df0f29bfff195a9ae02c4114 243 Gene3D G3DSA:3.40.190.10 26 240 8.3E-85 T 18-10-2018 CH53_192 242b1895df0f29bfff195a9ae02c4114 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 1.0E-70 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3104 4461c36056057cf12a2b371803199978 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 18-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CH53_3104 4461c36056057cf12a2b371803199978 175 Pfam PF00258 Flavodoxin 6 160 9.6E-33 T 18-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CH53_3104 4461c36056057cf12a2b371803199978 175 SUPERFAMILY SSF52218 4 170 9.92E-54 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_3104 4461c36056057cf12a2b371803199978 175 PIRSF PIRSF038996 1 172 3.4E-70 T 18-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 CH53_3104 4461c36056057cf12a2b371803199978 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 2.3E-76 T 18-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 CH53_3104 4461c36056057cf12a2b371803199978 175 Gene3D G3DSA:3.40.50.360 2 175 2.0E-58 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_2144 d9ac81b955145e8d9494ed626fd608ce 371 SUPERFAMILY SSF52540 4 243 1.77E-85 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2144 d9ac81b955145e8d9494ed626fd608ce 371 Gene3D G3DSA:3.40.50.300 1 238 8.4E-75 T 18-10-2018 CH53_2144 d9ac81b955145e8d9494ed626fd608ce 371 Pfam PF08402 TOBE domain 283 355 1.8E-11 T 18-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 CH53_2144 d9ac81b955145e8d9494ed626fd608ce 371 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2144 d9ac81b955145e8d9494ed626fd608ce 371 SUPERFAMILY SSF50331 236 364 2.92E-32 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CH53_2144 d9ac81b955145e8d9494ed626fd608ce 371 Pfam PF00005 ABC transporter 21 161 2.4E-33 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2144 d9ac81b955145e8d9494ed626fd608ce 371 Gene3D G3DSA:2.40.50.100 239 293 1.0E-20 T 18-10-2018 CH53_2144 d9ac81b955145e8d9494ed626fd608ce 371 Gene3D G3DSA:2.40.50.140 294 347 1.2E-29 T 18-10-2018 CH53_2144 d9ac81b955145e8d9494ed626fd608ce 371 SMART SM00382 28 211 7.6E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1205 98b7bc1f2a005f02f1e483fad738f09e 221 SMART SM00953 41 187 1.5E-8 T 18-10-2018 IPR014914 RES domain CH53_1205 98b7bc1f2a005f02f1e483fad738f09e 221 Pfam PF08808 RES domain 34 184 2.8E-23 T 18-10-2018 IPR014914 RES domain CH53_1375 28470c9f3be08b9b4f94c69b5f97987e 518 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 9 518 6.8E-281 T 18-10-2018 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 CH53_1375 28470c9f3be08b9b4f94c69b5f97987e 518 Gene3D G3DSA:3.90.1210.30 9 87 4.3E-26 T 18-10-2018 CH53_1375 28470c9f3be08b9b4f94c69b5f97987e 518 SMART SM00858 17 87 8.6E-11 T 18-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CH53_1375 28470c9f3be08b9b4f94c69b5f97987e 518 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 114 515 1.7E-144 T 18-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CH53_1375 28470c9f3be08b9b4f94c69b5f97987e 518 Pfam PF08666 SAF domain 17 86 2.9E-7 T 18-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CH53_1375 28470c9f3be08b9b4f94c69b5f97987e 518 Hamap MF_02031 Galactarate dehydratase (L-threo-forming) [garD]. 1 518 81.081 T 18-10-2018 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 CH53_926 21f6e2afbf8355a3756c5e11cb9b737e 208 SUPERFAMILY SSF53335 4 204 1.17E-47 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_926 21f6e2afbf8355a3756c5e11cb9b737e 208 Gene3D G3DSA:3.40.50.150 1 207 1.6E-78 T 18-10-2018 CH53_926 21f6e2afbf8355a3756c5e11cb9b737e 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 18-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CH53_926 21f6e2afbf8355a3756c5e11cb9b737e 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.565 T 18-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CH53_926 21f6e2afbf8355a3756c5e11cb9b737e 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 206 1.5E-75 T 18-10-2018 CH53_926 21f6e2afbf8355a3756c5e11cb9b737e 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 207 8.3E-89 T 18-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CH53_3269 e881faae19e5a4b560c39531e7eb4cab 345 SMART SM00354 10 80 1.5E-30 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_3269 e881faae19e5a4b560c39531e7eb4cab 345 Pfam PF13377 Periplasmic binding protein-like domain 180 338 1.0E-32 T 18-10-2018 CH53_3269 e881faae19e5a4b560c39531e7eb4cab 345 Gene3D G3DSA:3.40.50.2300 169 298 5.9E-68 T 18-10-2018 CH53_3269 e881faae19e5a4b560c39531e7eb4cab 345 SUPERFAMILY SSF53822 70 339 1.73E-77 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_3269 e881faae19e5a4b560c39531e7eb4cab 345 Gene3D G3DSA:3.40.50.2300 65 314 5.9E-68 T 18-10-2018 CH53_3269 e881faae19e5a4b560c39531e7eb4cab 345 Gene3D G3DSA:1.10.260.40 9 64 7.7E-24 T 18-10-2018 CH53_3269 e881faae19e5a4b560c39531e7eb4cab 345 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 22 32 3.7E-6 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_3269 e881faae19e5a4b560c39531e7eb4cab 345 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 3.7E-6 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_3269 e881faae19e5a4b560c39531e7eb4cab 345 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 18-10-2018 CH53_3269 e881faae19e5a4b560c39531e7eb4cab 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 57 4.2E-19 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_3269 e881faae19e5a4b560c39531e7eb4cab 345 SUPERFAMILY SSF47413 10 68 1.13E-18 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_4042 5de094847ac9c58d7c551f015617fc75 330 SUPERFAMILY SSF52283 2 135 2.65E-44 T 18-10-2018 CH53_4042 5de094847ac9c58d7c551f015617fc75 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 1.6E-53 T 18-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CH53_4042 5de094847ac9c58d7c551f015617fc75 330 Gene3D G3DSA:3.40.50.720 102 297 1.6E-138 T 18-10-2018 CH53_4042 5de094847ac9c58d7c551f015617fc75 330 Gene3D G3DSA:3.40.50.720 2 317 1.6E-138 T 18-10-2018 CH53_4042 5de094847ac9c58d7c551f015617fc75 330 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 18-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CH53_4042 5de094847ac9c58d7c551f015617fc75 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 328 1.6E-32 T 18-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CH53_4042 5de094847ac9c58d7c551f015617fc75 330 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 18-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CH53_4042 5de094847ac9c58d7c551f015617fc75 330 SUPERFAMILY SSF51735 102 298 1.84E-54 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_4042 5de094847ac9c58d7c551f015617fc75 330 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 18-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CH53_1276 c827560777cd019aefbdf76df8c0146d 89 Gene3D G3DSA:1.10.287.10 2 89 4.6E-37 T 18-10-2018 CH53_1276 c827560777cd019aefbdf76df8c0146d 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.2E-39 T 18-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1276 c827560777cd019aefbdf76df8c0146d 89 SUPERFAMILY SSF47060 3 89 3.53E-34 T 18-10-2018 IPR009068 S15/NS1, RNA-binding CH53_1276 c827560777cd019aefbdf76df8c0146d 89 SMART SM01387 8 88 3.9E-51 T 18-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1276 c827560777cd019aefbdf76df8c0146d 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 18-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1276 c827560777cd019aefbdf76df8c0146d 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 8.0E-39 T 18-10-2018 CH53_1276 c827560777cd019aefbdf76df8c0146d 89 Pfam PF00312 Ribosomal protein S15 8 88 5.0E-37 T 18-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1276 c827560777cd019aefbdf76df8c0146d 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.933 T 18-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1090 3909be65b3f2dbdcf0d09f5bae83554a 215 SUPERFAMILY SSF53254 1 209 1.44E-55 T 18-10-2018 IPR029033 Histidine phosphatase superfamily CH53_1090 3909be65b3f2dbdcf0d09f5bae83554a 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 1.6E-56 T 18-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CH53_1090 3909be65b3f2dbdcf0d09f5bae83554a 215 SMART SM00855 3 157 3.0E-22 T 18-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CH53_1090 3909be65b3f2dbdcf0d09f5bae83554a 215 Gene3D G3DSA:3.40.50.1240 1 212 1.8E-56 T 18-10-2018 IPR029033 Histidine phosphatase superfamily CH53_1090 3909be65b3f2dbdcf0d09f5bae83554a 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 18-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 CH53_1090 3909be65b3f2dbdcf0d09f5bae83554a 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 50.425 T 18-10-2018 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 CH53_1090 3909be65b3f2dbdcf0d09f5bae83554a 215 PIRSF PIRSF000709 2 174 1.4E-9 T 18-10-2018 CH53_2747 0cfbc237d3e0812de43f455a92de13e6 235 Gene3D G3DSA:3.30.2310.10 141 231 8.7E-22 T 18-10-2018 CH53_2747 0cfbc237d3e0812de43f455a92de13e6 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 6.0E-39 T 18-10-2018 IPR023370 YaeB-like, N-terminal domain CH53_2747 0cfbc237d3e0812de43f455a92de13e6 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 18-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site CH53_2747 0cfbc237d3e0812de43f455a92de13e6 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 148 1.9E-56 T 18-10-2018 IPR023370 YaeB-like, N-terminal domain CH53_2747 0cfbc237d3e0812de43f455a92de13e6 235 SUPERFAMILY SSF118196 1 230 4.05E-83 T 18-10-2018 IPR036413 YaeB-like superfamily CH53_2747 0cfbc237d3e0812de43f455a92de13e6 235 Gene3D G3DSA:2.40.30.70 2 140 7.8E-44 T 18-10-2018 IPR036414 YaeB, N-terminal domain superfamily CH53_362 7ab6a16db1ec3811feb143d60b22d46f 438 SUPERFAMILY SSF103473 4 415 2.22E-84 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_362 7ab6a16db1ec3811feb143d60b22d46f 438 Gene3D G3DSA:1.20.1250.20 224 416 4.6E-28 T 18-10-2018 CH53_362 7ab6a16db1ec3811feb143d60b22d46f 438 Gene3D G3DSA:1.20.1250.20 2 203 2.2E-46 T 18-10-2018 CH53_362 7ab6a16db1ec3811feb143d60b22d46f 438 Pfam PF07690 Major Facilitator Superfamily 17 379 3.7E-54 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_3031 5af588f5f4eaa25a4fafe8221d2fc4f6 271 Pfam PF00106 short chain dehydrogenase 6 185 2.7E-47 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3031 5af588f5f4eaa25a4fafe8221d2fc4f6 271 Gene3D G3DSA:3.40.50.720 3 251 2.9E-67 T 18-10-2018 CH53_3031 5af588f5f4eaa25a4fafe8221d2fc4f6 271 SUPERFAMILY SSF51735 3 263 1.29E-62 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3031 5af588f5f4eaa25a4fafe8221d2fc4f6 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 7.7E-12 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3031 5af588f5f4eaa25a4fafe8221d2fc4f6 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 7.7E-12 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3031 5af588f5f4eaa25a4fafe8221d2fc4f6 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 7.7E-12 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3031 5af588f5f4eaa25a4fafe8221d2fc4f6 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.4E-29 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3031 5af588f5f4eaa25a4fafe8221d2fc4f6 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.4E-29 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3031 5af588f5f4eaa25a4fafe8221d2fc4f6 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 1.4E-29 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3031 5af588f5f4eaa25a4fafe8221d2fc4f6 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.4E-29 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3031 5af588f5f4eaa25a4fafe8221d2fc4f6 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.4E-29 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3031 5af588f5f4eaa25a4fafe8221d2fc4f6 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.4E-29 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_193 76e95b32735ba53b232d013f9b79c531 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 231 2.0E-16 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_193 76e95b32735ba53b232d013f9b79c531 238 Gene3D G3DSA:1.10.3720.10 2 233 4.7E-47 T 18-10-2018 IPR035906 MetI-like superfamily CH53_193 76e95b32735ba53b232d013f9b79c531 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 4 79 4.1E-13 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CH53_193 76e95b32735ba53b232d013f9b79c531 238 SUPERFAMILY SSF161098 7 216 3.92E-36 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3383 351668ba6b3eca78c4655bddd05dddfb 237 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 94 126 - T 18-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_3383 351668ba6b3eca78c4655bddd05dddfb 237 PIRSF PIRSF036427 1 236 3.8E-71 T 18-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 CH53_3383 351668ba6b3eca78c4655bddd05dddfb 237 SUPERFAMILY SSF53790 1 231 1.7E-42 T 18-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CH53_3383 351668ba6b3eca78c4655bddd05dddfb 237 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 210 6.1E-44 T 18-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CH53_3383 351668ba6b3eca78c4655bddd05dddfb 237 Gene3D G3DSA:3.30.950.10 129 236 1.2E-17 T 18-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CH53_3383 351668ba6b3eca78c4655bddd05dddfb 237 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 3 231 6.3E-77 T 18-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 CH53_3383 351668ba6b3eca78c4655bddd05dddfb 237 Gene3D G3DSA:3.40.1010.10 1 128 1.8E-28 T 18-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CH53_4039 972b5571f867e95385ca68074366f3d6 123 PIRSF PIRSF025560 2 123 5.0E-39 T 18-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 CH53_4039 972b5571f867e95385ca68074366f3d6 123 Pfam PF07027 Protein of unknown function (DUF1318) 34 123 2.5E-29 T 18-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 CH53_1970 057aa045d1666c502e6ead69b3f2b678 108 Pfam PF00085 Thioredoxin 5 106 1.2E-33 T 18-10-2018 IPR013766 Thioredoxin domain GO:0045454 CH53_1970 057aa045d1666c502e6ead69b3f2b678 108 SUPERFAMILY SSF52833 2 107 5.52E-41 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_1970 057aa045d1666c502e6ead69b3f2b678 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 18-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CH53_1970 057aa045d1666c502e6ead69b3f2b678 108 PRINTS PR00421 Thioredoxin family signature 24 32 6.1E-10 T 18-10-2018 CH53_1970 057aa045d1666c502e6ead69b3f2b678 108 PRINTS PR00421 Thioredoxin family signature 72 83 6.1E-10 T 18-10-2018 CH53_1970 057aa045d1666c502e6ead69b3f2b678 108 PRINTS PR00421 Thioredoxin family signature 32 41 6.1E-10 T 18-10-2018 CH53_1970 057aa045d1666c502e6ead69b3f2b678 108 PIRSF PIRSF000077 2 108 5.0E-44 T 18-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CH53_1970 057aa045d1666c502e6ead69b3f2b678 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.2E-38 T 18-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CH53_1970 057aa045d1666c502e6ead69b3f2b678 108 Gene3D G3DSA:3.40.30.10 1 108 2.3E-37 T 18-10-2018 CH53_3444 9e58635058aaaf319982707d0b93f7f7 228 Pfam PF00072 Response regulator receiver domain 6 117 1.1E-21 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3444 9e58635058aaaf319982707d0b93f7f7 228 SUPERFAMILY SSF52172 3 159 9.39E-32 T 18-10-2018 IPR011006 CheY-like superfamily CH53_3444 9e58635058aaaf319982707d0b93f7f7 228 Pfam PF12431 Transcriptional regulator 133 161 7.9E-8 T 18-10-2018 IPR028141 Transcriptional regulator CH53_3444 9e58635058aaaf319982707d0b93f7f7 228 Gene3D G3DSA:3.40.50.2300 4 150 3.7E-27 T 18-10-2018 CH53_3444 9e58635058aaaf319982707d0b93f7f7 228 SMART SM00448 4 117 8.7E-26 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3444 9e58635058aaaf319982707d0b93f7f7 228 PIRSF PIRSF006171 2 228 6.1E-75 T 18-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 CH53_1462 f6910a6ed93f4c8642971b5d7ef5abd9 129 Pfam PF01196 Ribosomal protein L17 20 116 1.4E-34 T 18-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1462 f6910a6ed93f4c8642971b5d7ef5abd9 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 7.1E-51 T 18-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1462 f6910a6ed93f4c8642971b5d7ef5abd9 129 SUPERFAMILY SSF64263 1 118 4.71E-51 T 18-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1462 f6910a6ed93f4c8642971b5d7ef5abd9 129 Gene3D G3DSA:3.90.1030.10 1 117 3.4E-48 T 18-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1462 f6910a6ed93f4c8642971b5d7ef5abd9 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 18-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1462 f6910a6ed93f4c8642971b5d7ef5abd9 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 18-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_3882 58831ee932e2042e5eba4b442c64522b 233 SUPERFAMILY SSF141868 14 220 1.03E-24 T 18-10-2018 IPR035919 EAL domain superfamily CH53_3882 58831ee932e2042e5eba4b442c64522b 233 Gene3D G3DSA:3.20.20.450 1 232 4.0E-44 T 18-10-2018 IPR035919 EAL domain superfamily CH53_3882 58831ee932e2042e5eba4b442c64522b 233 SMART SM00052 3 227 1.5E-6 T 18-10-2018 IPR001633 EAL domain CH53_3882 58831ee932e2042e5eba4b442c64522b 233 Pfam PF00563 EAL domain 16 220 1.6E-18 T 18-10-2018 IPR001633 EAL domain CH53_3222 234adf3da9849d8bda7a9e314332f876 232 SMART SM00382 26 211 9.6E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3222 234adf3da9849d8bda7a9e314332f876 232 Gene3D G3DSA:3.40.50.300 1 224 1.3E-58 T 18-10-2018 CH53_3222 234adf3da9849d8bda7a9e314332f876 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 1.0E-105 T 18-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE CH53_3222 234adf3da9849d8bda7a9e314332f876 232 Pfam PF00005 ABC transporter 17 161 6.4E-33 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3222 234adf3da9849d8bda7a9e314332f876 232 SUPERFAMILY SSF52540 2 218 3.29E-58 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3700 6207cbbf3224a0ba52b033ee6c9818b1 441 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 427 1.2E-114 T 18-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CH53_3700 6207cbbf3224a0ba52b033ee6c9818b1 441 PIRSF PIRSF006351 5 436 1.9E-138 T 18-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CH53_3700 6207cbbf3224a0ba52b033ee6c9818b1 441 Pfam PF02378 Phosphotransferase system, EIIC 33 352 5.7E-52 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_417 deaa169129cd44db7f45f5fb6d3c6368 343 SUPERFAMILY SSF103481 247 332 1.83E-16 T 18-10-2018 CH53_417 deaa169129cd44db7f45f5fb6d3c6368 343 SUPERFAMILY SSF103481 63 162 4.32E-10 T 18-10-2018 CH53_417 deaa169129cd44db7f45f5fb6d3c6368 343 Pfam PF00892 EamA-like transporter family 28 162 4.7E-16 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_417 deaa169129cd44db7f45f5fb6d3c6368 343 Pfam PF00892 EamA-like transporter family 176 327 1.9E-17 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_417 deaa169129cd44db7f45f5fb6d3c6368 343 Gene3D G3DSA:1.10.3730.20 234 335 6.4E-6 T 18-10-2018 CH53_2798 fb0bb846873a9951b7832a12a289e60c 352 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 37.51 T 18-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CH53_2798 fb0bb846873a9951b7832a12a289e60c 352 Gene3D G3DSA:1.10.150.20 166 227 1.0E-19 T 18-10-2018 CH53_2798 fb0bb846873a9951b7832a12a289e60c 352 Gene3D G3DSA:3.30.70.270 4 164 6.0E-66 T 18-10-2018 CH53_2798 fb0bb846873a9951b7832a12a289e60c 352 Pfam PF00817 impB/mucB/samB family 7 154 8.0E-50 T 18-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CH53_2798 fb0bb846873a9951b7832a12a289e60c 352 SUPERFAMILY SSF56672 1 234 7.65E-95 T 18-10-2018 CH53_2798 fb0bb846873a9951b7832a12a289e60c 352 Gene3D G3DSA:2.30.40.20 21 73 6.0E-66 T 18-10-2018 CH53_2798 fb0bb846873a9951b7832a12a289e60c 352 Gene3D G3DSA:3.30.1490.100 237 351 1.5E-30 T 18-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CH53_2798 fb0bb846873a9951b7832a12a289e60c 352 SUPERFAMILY SSF100879 241 349 1.41E-27 T 18-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CH53_2798 fb0bb846873a9951b7832a12a289e60c 352 Pfam PF11799 impB/mucB/samB family C-terminal domain 235 341 5.0E-9 T 18-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CH53_2798 fb0bb846873a9951b7832a12a289e60c 352 Pfam PF11798 IMS family HHH motif 169 197 7.0E-9 T 18-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CH53_122 b134b3e98e4a61b1f864949b33b7d1cf 550 Pfam PF02470 MlaD protein 291 393 5.5E-13 T 18-10-2018 IPR003399 Mce/MlaD CH53_122 b134b3e98e4a61b1f864949b33b7d1cf 550 Pfam PF02470 MlaD protein 45 136 8.2E-11 T 18-10-2018 IPR003399 Mce/MlaD CH53_122 b134b3e98e4a61b1f864949b33b7d1cf 550 Pfam PF02470 MlaD protein 161 220 1.1E-6 T 18-10-2018 IPR003399 Mce/MlaD CH53_3951 96369ad410c6200610371ed2bc985e50 332 Pfam PF00962 Adenosine/AMP deaminase 6 329 3.3E-96 T 18-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 CH53_3951 96369ad410c6200610371ed2bc985e50 332 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 18-10-2018 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 CH53_3951 96369ad410c6200610371ed2bc985e50 332 SUPERFAMILY SSF51556 5 326 2.56E-76 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_3951 96369ad410c6200610371ed2bc985e50 332 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 7.9E-109 T 18-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 CH53_3951 96369ad410c6200610371ed2bc985e50 332 Hamap MF_00540 Adenosine deaminase [add]. 1 331 52.774 T 18-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 CH53_3951 96369ad410c6200610371ed2bc985e50 332 Gene3D G3DSA:3.20.20.140 4 332 2.8E-97 T 18-10-2018 CH53_1813 d2fd72e2a3eae31d23bbfe43dd94f110 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.738 T 18-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CH53_1813 d2fd72e2a3eae31d23bbfe43dd94f110 145 SUPERFAMILY SSF69500 1 144 3.66E-56 T 18-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CH53_1813 d2fd72e2a3eae31d23bbfe43dd94f110 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 8.0E-69 T 18-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CH53_1813 d2fd72e2a3eae31d23bbfe43dd94f110 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 4.3E-53 T 18-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CH53_1813 d2fd72e2a3eae31d23bbfe43dd94f110 145 Gene3D G3DSA:3.50.80.10 1 145 4.8E-56 T 18-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CH53_1253 e6487a6d4e99f527dacf90aaf1950ce2 241 SUPERFAMILY SSF46785 8 82 2.13E-18 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1253 e6487a6d4e99f527dacf90aaf1950ce2 241 SMART SM00345 17 75 3.0E-20 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1253 e6487a6d4e99f527dacf90aaf1950ce2 241 SMART SM00866 96 236 1.2E-28 T 18-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CH53_1253 e6487a6d4e99f527dacf90aaf1950ce2 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 1.2E-19 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1253 e6487a6d4e99f527dacf90aaf1950ce2 241 Gene3D G3DSA:3.40.1410.10 84 241 2.3E-37 T 18-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CH53_1253 e6487a6d4e99f527dacf90aaf1950ce2 241 Gene3D G3DSA:1.10.10.10 10 75 3.6E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1253 e6487a6d4e99f527dacf90aaf1950ce2 241 SUPERFAMILY SSF64288 63 240 5.18E-38 T 18-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CH53_1253 e6487a6d4e99f527dacf90aaf1950ce2 241 Pfam PF07702 UTRA domain 96 235 1.3E-29 T 18-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CH53_1253 e6487a6d4e99f527dacf90aaf1950ce2 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 3.3E-8 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1253 e6487a6d4e99f527dacf90aaf1950ce2 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 3.3E-8 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1253 e6487a6d4e99f527dacf90aaf1950ce2 241 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 7 241 5.1E-87 T 18-10-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF CH53_1168 0b75032c2a116a14333fc0626dba62f6 326 PIRSF PIRSF017082 1 326 2.5E-77 T 18-10-2018 IPR005064 Bordetella uptake gene GO:0030288 CH53_1168 0b75032c2a116a14333fc0626dba62f6 326 Gene3D G3DSA:3.40.190.10 125 252 7.1E-55 T 18-10-2018 CH53_1168 0b75032c2a116a14333fc0626dba62f6 326 SUPERFAMILY SSF53850 63 231 5.65E-9 T 18-10-2018 CH53_1168 0b75032c2a116a14333fc0626dba62f6 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 257 8.1E-19 T 18-10-2018 IPR005064 Bordetella uptake gene GO:0030288 CH53_1168 0b75032c2a116a14333fc0626dba62f6 326 Gene3D G3DSA:3.40.190.150 31 317 7.1E-55 T 18-10-2018 CH53_144 18317f39d67bbcd033aff9f1e972415d 250 Gene3D G3DSA:3.90.550.10 1 250 5.0E-101 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_144 18317f39d67bbcd033aff9f1e972415d 250 SUPERFAMILY SSF53448 3 247 9.01E-68 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_144 18317f39d67bbcd033aff9f1e972415d 250 Pfam PF02348 Cytidylyltransferase 4 221 7.1E-69 T 18-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CH53_144 18317f39d67bbcd033aff9f1e972415d 250 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 1.0E-122 T 18-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CH53_144 18317f39d67bbcd033aff9f1e972415d 250 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 45.724 T 18-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CH53_1141 99f537cd33c3925a6e2a1461ca29ed8a 361 SUPERFAMILY SSF51126 27 356 1.16E-60 T 18-10-2018 IPR011050 Pectin lyase fold/virulence factor CH53_1141 99f537cd33c3925a6e2a1461ca29ed8a 361 Pfam PF01095 Pectinesterase 31 268 8.0E-37 T 18-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 CH53_1141 99f537cd33c3925a6e2a1461ca29ed8a 361 Gene3D G3DSA:2.160.20.10 41 361 2.0E-135 T 18-10-2018 IPR012334 Pectin lyase fold CH53_152 7076143b77d5f29ae8430f7871d02363 725 Pfam PF00753 Metallo-beta-lactamase superfamily 477 652 1.2E-18 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_152 7076143b77d5f29ae8430f7871d02363 725 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 36 689 4.8E-184 T 18-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 CH53_152 7076143b77d5f29ae8430f7871d02363 725 SMART SM00849 476 660 1.8E-13 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_152 7076143b77d5f29ae8430f7871d02363 725 Gene3D G3DSA:3.60.15.10 465 703 3.4E-47 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_152 7076143b77d5f29ae8430f7871d02363 725 Pfam PF13567 Domain of unknown function (DUF4131) 16 125 6.1E-7 T 18-10-2018 IPR025405 Domain of unknown function DUF4131 CH53_152 7076143b77d5f29ae8430f7871d02363 725 Pfam PF03772 Competence protein 171 440 1.4E-55 T 18-10-2018 IPR004477 ComEC/Rec2-related protein CH53_152 7076143b77d5f29ae8430f7871d02363 725 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 192 375 1.2E-39 T 18-10-2018 IPR004477 ComEC/Rec2-related protein CH53_152 7076143b77d5f29ae8430f7871d02363 725 SUPERFAMILY SSF56281 467 713 7.73E-46 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_4097 40080d01494623dfbd5d7a475d2cd939 192 PIRSF PIRSF000349 1 192 2.8E-86 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_4097 40080d01494623dfbd5d7a475d2cd939 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 18-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_4097 40080d01494623dfbd5d7a475d2cd939 192 Gene3D G3DSA:2.40.500.20 83 192 3.3E-44 T 18-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_4097 40080d01494623dfbd5d7a475d2cd939 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 8.6E-35 T 18-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_4097 40080d01494623dfbd5d7a475d2cd939 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.9E-22 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_4097 40080d01494623dfbd5d7a475d2cd939 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 3.9E-22 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_4097 40080d01494623dfbd5d7a475d2cd939 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 3.9E-22 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_4097 40080d01494623dfbd5d7a475d2cd939 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.9E-22 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_4097 40080d01494623dfbd5d7a475d2cd939 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 3.9E-22 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_4097 40080d01494623dfbd5d7a475d2cd939 192 SUPERFAMILY SSF46609 1 84 1.96E-35 T 18-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_4097 40080d01494623dfbd5d7a475d2cd939 192 Gene3D G3DSA:1.10.287.990 20 82 4.2E-26 T 18-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_4097 40080d01494623dfbd5d7a475d2cd939 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 1.4E-40 T 18-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_4097 40080d01494623dfbd5d7a475d2cd939 192 SUPERFAMILY SSF54719 82 191 4.45E-44 T 18-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CH53_1467 4d06cdcbdaa96a508fb6a347610bdc61 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 4.7E-22 T 18-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1467 4d06cdcbdaa96a508fb6a347610bdc61 38 SUPERFAMILY SSF57840 1 38 5.49E-17 T 18-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1467 4d06cdcbdaa96a508fb6a347610bdc61 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.971 T 18-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1467 4d06cdcbdaa96a508fb6a347610bdc61 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 18-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1467 4d06cdcbdaa96a508fb6a347610bdc61 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 4.0E-10 T 18-10-2018 CH53_1467 4d06cdcbdaa96a508fb6a347610bdc61 38 Pfam PF00444 Ribosomal protein L36 1 38 1.7E-20 T 18-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 1.5E-25 T 18-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 1.5E-25 T 18-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 1.5E-25 T 18-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 1.5E-25 T 18-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 1.5E-25 T 18-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 1.5E-25 T 18-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 Gene3D G3DSA:1.10.730.10 389 526 8.8E-34 T 18-10-2018 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 Gene3D G3DSA:2.40.50.140 563 675 8.5E-29 T 18-10-2018 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 Pfam PF09334 tRNA synthetases class I (M) 8 396 3.7E-164 T 18-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 551 675 5.6E-43 T 18-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 535 1.9E-201 T 18-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.483 T 18-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 SUPERFAMILY SSF50249 568 674 1.0E-27 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 SUPERFAMILY SSF57770 142 176 7.59E-13 T 18-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 SUPERFAMILY SSF47323 390 544 6.17E-45 T 18-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 Gene3D G3DSA:3.40.50.620 8 384 2.3E-163 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 Gene3D G3DSA:2.20.28.20 142 176 2.3E-163 T 18-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 Pfam PF01588 Putative tRNA binding domain 579 672 3.7E-21 T 18-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CH53_3300 26daefa4b1b50d66e571383c5c95998a 675 SUPERFAMILY SSF52374 6 387 1.01E-101 T 18-10-2018 CH53_452 1da0c2b3bbcc8b46003acee01138e959 96 SMART SM00830 10 89 1.7E-26 T 18-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CH53_452 1da0c2b3bbcc8b46003acee01138e959 96 SUPERFAMILY SSF48600 4 88 3.82E-23 T 18-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CH53_452 1da0c2b3bbcc8b46003acee01138e959 96 Pfam PF01817 Chorismate mutase type II 10 86 9.9E-19 T 18-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CH53_452 1da0c2b3bbcc8b46003acee01138e959 96 Gene3D G3DSA:1.20.59.10 1 95 2.3E-30 T 18-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CH53_61 1ce96d83d890a9ea0caa2e0e1feace73 349 SUPERFAMILY SSF89733 1 333 2.22E-110 T 18-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 CH53_61 1ce96d83d890a9ea0caa2e0e1feace73 349 Pfam PF02615 Malate/L-lactate dehydrogenase 4 331 6.3E-115 T 18-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 CH53_61 1ce96d83d890a9ea0caa2e0e1feace73 349 Gene3D G3DSA:1.10.1530.10 1 62 8.5E-26 T 18-10-2018 CH53_61 1ce96d83d890a9ea0caa2e0e1feace73 349 TIGRFAM TIGR03175 AllD: ureidoglycolate dehydrogenase 1 348 4.9E-184 T 18-10-2018 IPR017590 Ureidoglycolate dehydrogenase KEGG: 00230+1.1.1.350 CH53_61 1ce96d83d890a9ea0caa2e0e1feace73 349 Gene3D G3DSA:3.30.1370.60 67 305 1.4E-91 T 18-10-2018 CH53_3378 a1c0612af0411a88d7b39c555a576d77 268 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 20 226 2.2E-42 T 18-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CH53_3378 a1c0612af0411a88d7b39c555a576d77 268 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 24 38 - T 18-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CH53_3378 a1c0612af0411a88d7b39c555a576d77 268 Gene3D G3DSA:3.40.1010.10 1 128 7.0E-29 T 18-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CH53_3378 a1c0612af0411a88d7b39c555a576d77 268 Gene3D G3DSA:3.30.950.10 129 248 2.7E-47 T 18-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CH53_3378 a1c0612af0411a88d7b39c555a576d77 268 SUPERFAMILY SSF53790 15 266 2.62E-66 T 18-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CH53_3378 a1c0612af0411a88d7b39c555a576d77 268 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 21 266 2.1E-97 T 18-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 CH53_2349 5d53d95bbd8f15762850650adce83580 56 Gene3D G3DSA:1.10.10.10 1 47 1.7E-9 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2349 5d53d95bbd8f15762850650adce83580 56 SUPERFAMILY SSF46785 3 45 4.83E-8 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2349 5d53d95bbd8f15762850650adce83580 56 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 44 2.0E-9 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_795 c861bcb526b93ef298e62ea96aedd4d8 244 SUPERFAMILY SSF64438 5 243 1.06E-86 T 18-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CH53_795 c861bcb526b93ef298e62ea96aedd4d8 244 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 27 243 1.2E-66 T 18-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase CH53_795 c861bcb526b93ef298e62ea96aedd4d8 244 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 21 242 5.7E-75 T 18-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase CH53_795 c861bcb526b93ef298e62ea96aedd4d8 244 Gene3D G3DSA:3.60.140.10 1 244 2.4E-93 T 18-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily CH53_1564 3c131f121e9305f81cb55c3dcc2bee1a 87 SUPERFAMILY SSF159871 4 87 1.7E-24 T 18-10-2018 IPR036275 YdgH-like superfamily CH53_1564 3c131f121e9305f81cb55c3dcc2bee1a 87 Pfam PF07338 Protein of unknown function (DUF1471) 34 87 5.2E-21 T 18-10-2018 IPR010854 Domain of unknown function DUF1471 CH53_1564 3c131f121e9305f81cb55c3dcc2bee1a 87 Gene3D G3DSA:3.30.1660.10 22 87 1.3E-24 T 18-10-2018 IPR025543 Dodecin-like CH53_551 03f0613721f07cf1b1ac068dd0da132c 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 4.4E-27 T 18-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CH53_551 03f0613721f07cf1b1ac068dd0da132c 759 Gene3D G3DSA:3.40.50.10380 1 160 4.7E-68 T 18-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 CH53_551 03f0613721f07cf1b1ac068dd0da132c 759 PIRSF PIRSF036684 1 758 0.0 T 18-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 CH53_551 03f0613721f07cf1b1ac068dd0da132c 759 SUPERFAMILY SSF51735 163 453 6.13E-86 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_551 03f0613721f07cf1b1ac068dd0da132c 759 SMART SM01274 18 151 2.6E-79 T 18-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CH53_551 03f0613721f07cf1b1ac068dd0da132c 759 SMART SM00919 163 401 2.1E-140 T 18-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CH53_551 03f0613721f07cf1b1ac068dd0da132c 759 Gene3D G3DSA:3.40.50.10950 447 751 3.8E-94 T 18-10-2018 CH53_551 03f0613721f07cf1b1ac068dd0da132c 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 359 5.6E-16 T 18-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CH53_551 03f0613721f07cf1b1ac068dd0da132c 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 3.3E-99 T 18-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CH53_551 03f0613721f07cf1b1ac068dd0da132c 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 18-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CH53_551 03f0613721f07cf1b1ac068dd0da132c 759 SUPERFAMILY SSF53659 430 754 2.92E-92 T 18-10-2018 CH53_551 03f0613721f07cf1b1ac068dd0da132c 759 SUPERFAMILY SSF53223 10 161 2.01E-52 T 18-10-2018 CH53_551 03f0613721f07cf1b1ac068dd0da132c 759 Gene3D G3DSA:3.40.50.10750 573 727 3.8E-94 T 18-10-2018 CH53_551 03f0613721f07cf1b1ac068dd0da132c 759 Gene3D G3DSA:3.40.50.720 161 446 6.0E-81 T 18-10-2018 CH53_938 0dae5cb5707e2c0b4d0847d5d7d229c6 302 SUPERFAMILY SSF52402 6 209 4.19E-75 T 18-10-2018 CH53_938 0dae5cb5707e2c0b4d0847d5d7d229c6 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 2.5E-166 T 18-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CH53_938 0dae5cb5707e2c0b4d0847d5d7d229c6 302 PIRSF PIRSF002936 1 302 3.7E-155 T 18-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CH53_938 0dae5cb5707e2c0b4d0847d5d7d229c6 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.696 T 18-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CH53_938 0dae5cb5707e2c0b4d0847d5d7d229c6 302 Gene3D G3DSA:3.40.50.620 7 212 8.1E-65 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_938 0dae5cb5707e2c0b4d0847d5d7d229c6 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 1.8E-64 T 18-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 CH53_3392 d620382aabb2e8a38ee76425ec7d4b69 353 SUPERFAMILY SSF52733 6 345 5.1E-110 T 18-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CH53_3392 d620382aabb2e8a38ee76425ec7d4b69 353 Gene3D G3DSA:1.10.1610.10 11 337 2.3E-127 T 18-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CH53_3392 d620382aabb2e8a38ee76425ec7d4b69 353 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 15 345 1.5E-118 T 18-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CH53_3392 d620382aabb2e8a38ee76425ec7d4b69 353 Pfam PF02277 Phosphoribosyltransferase 11 344 7.4E-118 T 18-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CH53_3392 d620382aabb2e8a38ee76425ec7d4b69 353 Gene3D G3DSA:3.40.50.10210 57 328 2.3E-127 T 18-10-2018 CH53_3392 d620382aabb2e8a38ee76425ec7d4b69 353 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 13 347 33.29 T 18-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CH53_4330 93d132eb0d078f445d32a7e40ca2dd9c 221 Pfam PF03837 RecT family 3 100 2.3E-13 T 18-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 CH53_1046 e9bea902cc78abd14b808acbb6efaa21 329 Pfam PF01547 Bacterial extracellular solute-binding protein 42 274 5.6E-18 T 18-10-2018 IPR006059 Bacterial extracellular solute-binding protein CH53_1046 e9bea902cc78abd14b808acbb6efaa21 329 Gene3D G3DSA:3.40.190.10 125 324 1.3E-119 T 18-10-2018 CH53_1046 e9bea902cc78abd14b808acbb6efaa21 329 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 9 328 1.4E-165 T 18-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 CH53_1046 e9bea902cc78abd14b808acbb6efaa21 329 SUPERFAMILY SSF53850 23 324 5.61E-67 T 18-10-2018 CH53_1046 e9bea902cc78abd14b808acbb6efaa21 329 Gene3D G3DSA:3.40.190.10 25 299 1.3E-119 T 18-10-2018 CH53_1046 e9bea902cc78abd14b808acbb6efaa21 329 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 323 5.7E-146 T 18-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 CH53_3076 37b982139675f95a84fc4960772e66f4 309 Gene3D G3DSA:3.40.190.10 142 237 1.0E-100 T 18-10-2018 CH53_3076 37b982139675f95a84fc4960772e66f4 309 SUPERFAMILY SSF53850 3 281 6.34E-61 T 18-10-2018 CH53_3076 37b982139675f95a84fc4960772e66f4 309 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 49 278 3.2E-46 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_3076 37b982139675f95a84fc4960772e66f4 309 Gene3D G3DSA:3.40.190.10 37 283 1.0E-100 T 18-10-2018 CH53_3076 37b982139675f95a84fc4960772e66f4 309 SMART SM00062 48 280 2.1E-64 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CH53_2442 e10fd69e04626badd73bb2bf6fae2df3 111 Pfam PF17090 Uncharacterised protein family 46 109 9.1E-13 T 18-10-2018 IPR031381 Uncharacterised protein YtcA CH53_3857 0d657ec0f9f5f930d7fd7d4c71669bc9 128 SUPERFAMILY SSF55811 3 124 7.18E-33 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CH53_3857 0d657ec0f9f5f930d7fd7d4c71669bc9 128 PRINTS PR00502 NUDIX hydrolase family signature 44 59 1.3E-6 T 18-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CH53_3857 0d657ec0f9f5f930d7fd7d4c71669bc9 128 PRINTS PR00502 NUDIX hydrolase family signature 30 44 1.3E-6 T 18-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CH53_3857 0d657ec0f9f5f930d7fd7d4c71669bc9 128 Gene3D G3DSA:3.90.79.10 1 128 2.0E-36 T 18-10-2018 CH53_3857 0d657ec0f9f5f930d7fd7d4c71669bc9 128 Pfam PF00293 NUDIX domain 4 122 5.6E-19 T 18-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CH53_3857 0d657ec0f9f5f930d7fd7d4c71669bc9 128 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 18-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CH53_1358 8add5f9589f471f5db8cb56cc9524dba 104 Gene3D G3DSA:1.10.3730.20 1 104 7.6E-33 T 18-10-2018 CH53_1358 8add5f9589f471f5db8cb56cc9524dba 104 SUPERFAMILY SSF103481 5 103 5.62E-21 T 18-10-2018 CH53_1358 8add5f9589f471f5db8cb56cc9524dba 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 5.8E-32 T 18-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CH53_834 4bc47923579f6c0514b8796932adfcda 313 Pfam PF13407 Periplasmic binding protein domain 29 284 3.2E-58 T 18-10-2018 IPR025997 Periplasmic binding protein CH53_834 4bc47923579f6c0514b8796932adfcda 313 Gene3D G3DSA:3.40.50.2300 130 264 1.0E-91 T 18-10-2018 CH53_834 4bc47923579f6c0514b8796932adfcda 313 SUPERFAMILY SSF53822 28 305 7.07E-78 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_834 4bc47923579f6c0514b8796932adfcda 313 Gene3D G3DSA:3.40.50.2300 36 283 1.0E-91 T 18-10-2018 CH53_2958 039c3e1d8f93b86973ca6f8a5577096a 298 Gene3D G3DSA:1.10.10.60 186 289 1.0E-22 T 18-10-2018 CH53_2958 039c3e1d8f93b86973ca6f8a5577096a 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 239 281 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CH53_2958 039c3e1d8f93b86973ca6f8a5577096a 298 SUPERFAMILY SSF46689 238 283 3.9E-7 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_2958 039c3e1d8f93b86973ca6f8a5577096a 298 SMART SM00342 202 285 3.0E-19 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_2958 039c3e1d8f93b86973ca6f8a5577096a 298 Pfam PF06719 AraC-type transcriptional regulator N-terminus 24 173 5.1E-43 T 18-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal CH53_2958 039c3e1d8f93b86973ca6f8a5577096a 298 SUPERFAMILY SSF46689 186 236 2.55E-9 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_2958 039c3e1d8f93b86973ca6f8a5577096a 298 Pfam PF12833 Helix-turn-helix domain 208 281 1.0E-18 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_2521 22193c48d30fa1b370f0b6824e7c34b9 184 SMART SM00877 3 79 9.3E-28 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_2521 22193c48d30fa1b370f0b6824e7c34b9 184 Pfam PF16365 Ethanolamine utilization protein EutK C-terminus 123 173 1.8E-15 T 18-10-2018 IPR032298 Ethanolamine utilization protein EutK, C-terminal CH53_2521 22193c48d30fa1b370f0b6824e7c34b9 184 Pfam PF00936 BMC domain 4 79 6.9E-22 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_2521 22193c48d30fa1b370f0b6824e7c34b9 184 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 54 3.0E-15 T 18-10-2018 CH53_2521 22193c48d30fa1b370f0b6824e7c34b9 184 Gene3D G3DSA:1.10.10.10 119 184 5.2E-16 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2521 22193c48d30fa1b370f0b6824e7c34b9 184 Gene3D G3DSA:3.30.70.1710 1 108 9.9E-27 T 18-10-2018 CH53_2521 22193c48d30fa1b370f0b6824e7c34b9 184 SUPERFAMILY SSF143414 3 88 1.01E-24 T 18-10-2018 IPR037233 CcmK-like superfamily CH53_3808 7e6cebf66eea2a07cdefc97705ce3bb9 320 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 11 315 6.0E-133 T 18-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 CH53_3808 7e6cebf66eea2a07cdefc97705ce3bb9 320 PIRSF PIRSF026649 11 315 8.7E-92 T 18-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CH53_3808 7e6cebf66eea2a07cdefc97705ce3bb9 320 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 14 306 4.8E-95 T 18-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CH53_3808 7e6cebf66eea2a07cdefc97705ce3bb9 320 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 5 311 53.689 T 18-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 CH53_436 0b1ec565aa79cb96bbfba74d21a967b8 176 Pfam PF01713 Smr domain 98 172 2.8E-19 T 18-10-2018 IPR002625 Smr domain CH53_436 0b1ec565aa79cb96bbfba74d21a967b8 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 39.691 T 18-10-2018 IPR022990 Uncharacterised protein family UPF0115 CH53_436 0b1ec565aa79cb96bbfba74d21a967b8 176 Gene3D G3DSA:3.30.1370.110 50 176 2.5E-30 T 18-10-2018 CH53_436 0b1ec565aa79cb96bbfba74d21a967b8 176 SMART SM00463 95 173 3.1E-19 T 18-10-2018 IPR002625 Smr domain CH53_436 0b1ec565aa79cb96bbfba74d21a967b8 176 SUPERFAMILY SSF160443 96 171 1.57E-10 T 18-10-2018 IPR036063 Smr domain superfamily CH53_824 09e3f3871034dabec0bbc9168ff116ed 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 157 3.9E-56 T 18-10-2018 IPR008136 CinA, C-terminal CH53_824 09e3f3871034dabec0bbc9168ff116ed 162 SUPERFAMILY SSF142433 6 159 2.22E-57 T 18-10-2018 IPR036653 CinA-like, C-terminal CH53_824 09e3f3871034dabec0bbc9168ff116ed 162 Gene3D G3DSA:3.90.950.20 1 161 1.3E-60 T 18-10-2018 IPR036653 CinA-like, C-terminal CH53_824 09e3f3871034dabec0bbc9168ff116ed 162 Pfam PF02464 Competence-damaged protein 9 158 8.2E-58 T 18-10-2018 IPR008136 CinA, C-terminal CH53_3500 4a60b6032d5a7921b65c5399a0cbfccc 654 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 23 138 1.3E-13 T 18-10-2018 CH53_3500 4a60b6032d5a7921b65c5399a0cbfccc 654 Gene3D G3DSA:3.30.565.10 8 197 2.8E-20 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3500 4a60b6032d5a7921b65c5399a0cbfccc 654 SUPERFAMILY SSF55874 21 177 1.49E-15 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_3062 ef7d3d294c4d7b170ff3f6c8cdb6e525 368 Gene3D G3DSA:2.40.40.10 75 167 1.1E-32 T 18-10-2018 IPR036908 RlpA-like domain superfamily CH53_3062 ef7d3d294c4d7b170ff3f6c8cdb6e525 368 Gene3D G3DSA:3.30.70.1070 295 366 1.5E-11 T 18-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CH53_3062 ef7d3d294c4d7b170ff3f6c8cdb6e525 368 SUPERFAMILY SSF110997 293 365 3.92E-15 T 18-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CH53_3062 ef7d3d294c4d7b170ff3f6c8cdb6e525 368 Pfam PF05036 Sporulation related domain 293 365 2.0E-15 T 18-10-2018 IPR007730 Sporulation-like domain GO:0042834 CH53_3062 ef7d3d294c4d7b170ff3f6c8cdb6e525 368 Pfam PF03330 Lytic transglycolase 75 164 3.3E-25 T 18-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CH53_3062 ef7d3d294c4d7b170ff3f6c8cdb6e525 368 SUPERFAMILY SSF50685 76 164 9.07E-9 T 18-10-2018 IPR036908 RlpA-like domain superfamily CH53_3062 ef7d3d294c4d7b170ff3f6c8cdb6e525 368 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 16 166 22.972 T 18-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 CH53_3062 ef7d3d294c4d7b170ff3f6c8cdb6e525 368 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 78 177 4.3E-36 T 18-10-2018 IPR012997 Rare lipoprotein A CH53_1704 625a2efc1393f5fd1ac37b9b977e0653 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 2.1E-61 T 18-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CH53_1704 625a2efc1393f5fd1ac37b9b977e0653 326 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 18-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CH53_1704 625a2efc1393f5fd1ac37b9b977e0653 326 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 324 67.016 T 18-10-2018 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 CH53_1704 625a2efc1393f5fd1ac37b9b977e0653 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 3.3E-28 T 18-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CH53_1704 625a2efc1393f5fd1ac37b9b977e0653 326 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 176 - T 18-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CH53_1704 625a2efc1393f5fd1ac37b9b977e0653 326 SUPERFAMILY SSF52283 1 133 5.29E-29 T 18-10-2018 CH53_1704 625a2efc1393f5fd1ac37b9b977e0653 326 Gene3D G3DSA:3.40.50.720 98 286 4.0E-108 T 18-10-2018 CH53_1704 625a2efc1393f5fd1ac37b9b977e0653 326 Gene3D G3DSA:3.40.50.720 9 311 4.0E-108 T 18-10-2018 CH53_1704 625a2efc1393f5fd1ac37b9b977e0653 326 SUPERFAMILY SSF51735 100 288 6.81E-59 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1388 0e9302f54ac4aec9497dfbbc1f997b35 237 Pfam PF13302 Acetyltransferase (GNAT) domain 35 174 6.1E-14 T 18-10-2018 IPR000182 GNAT domain CH53_1388 0e9302f54ac4aec9497dfbbc1f997b35 237 Gene3D G3DSA:3.40.630.30 16 234 3.8E-55 T 18-10-2018 CH53_1388 0e9302f54ac4aec9497dfbbc1f997b35 237 SUPERFAMILY SSF55729 26 198 3.54E-33 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_2496 38d6ee7892ce1e1b2ca5929d43f04d04 667 Gene3D G3DSA:3.10.50.40 557 666 5.0E-14 T 18-10-2018 CH53_2496 38d6ee7892ce1e1b2ca5929d43f04d04 667 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 602 662 7.8E-5 T 18-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CH53_2496 38d6ee7892ce1e1b2ca5929d43f04d04 667 SUPERFAMILY SSF54534 466 662 5.3E-19 T 18-10-2018 CH53_2496 38d6ee7892ce1e1b2ca5929d43f04d04 667 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 455 569 2.7E-18 T 18-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CH53_2496 38d6ee7892ce1e1b2ca5929d43f04d04 667 Gene3D G3DSA:1.10.287.460 448 556 9.0E-17 T 18-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 CH53_872 7e452224ace5e8219ae20a50033ebad6 114 Gene3D G3DSA:1.10.10.10 3 111 2.0E-15 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_872 7e452224ace5e8219ae20a50033ebad6 114 SUPERFAMILY SSF46785 3 92 1.06E-16 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_872 7e452224ace5e8219ae20a50033ebad6 114 SMART SM00418 15 92 9.5E-11 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_872 7e452224ace5e8219ae20a50033ebad6 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 3.9E-5 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_872 7e452224ace5e8219ae20a50033ebad6 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 3.9E-5 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_872 7e452224ace5e8219ae20a50033ebad6 114 Pfam PF12840 Helix-turn-helix domain 15 65 5.7E-10 T 18-10-2018 CH53_967 47a8886e8de80e323955080af313a7c6 828 Gene3D G3DSA:1.20.5.100 63 104 3.1E-20 T 18-10-2018 CH53_967 47a8886e8de80e323955080af313a7c6 828 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 87 1.5E-29 T 18-10-2018 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain CH53_967 47a8886e8de80e323955080af313a7c6 828 Gene3D G3DSA:1.10.3810.10 209 412 2.1E-264 T 18-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_967 47a8886e8de80e323955080af313a7c6 828 Gene3D G3DSA:3.30.2060.10 119 208 2.1E-264 T 18-10-2018 CH53_967 47a8886e8de80e323955080af313a7c6 828 SUPERFAMILY SSF53955 205 411 9.28E-66 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily CH53_967 47a8886e8de80e323955080af313a7c6 828 SUPERFAMILY SSF52540 113 170 1.36E-5 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_967 47a8886e8de80e323955080af313a7c6 828 SUPERFAMILY SSF56601 370 783 7.85E-105 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CH53_967 47a8886e8de80e323955080af313a7c6 828 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 77 802 0.0 T 18-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_967 47a8886e8de80e323955080af313a7c6 828 Pfam PF14814 Bifunctional transglycosylase second domain 121 205 1.3E-28 T 18-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_967 47a8886e8de80e323955080af313a7c6 828 Pfam PF00905 Penicillin binding protein transpeptidase domain 481 727 1.7E-21 T 18-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CH53_967 47a8886e8de80e323955080af313a7c6 828 PIRSF PIRSF002799 46 828 0.0 T 18-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_967 47a8886e8de80e323955080af313a7c6 828 Pfam PF00912 Transglycosylase 217 388 9.4E-55 T 18-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_967 47a8886e8de80e323955080af313a7c6 828 Gene3D G3DSA:3.40.710.10 111 769 2.1E-264 T 18-10-2018 CH53_3065 71a76491964112c0f87628c6ee6cf0cf 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 4.1E-46 T 18-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CH53_3065 71a76491964112c0f87628c6ee6cf0cf 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 2.5E-82 T 18-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CH53_3065 71a76491964112c0f87628c6ee6cf0cf 156 PIRSF PIRSF004505 1 155 5.2E-40 T 18-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CH53_3065 71a76491964112c0f87628c6ee6cf0cf 156 SUPERFAMILY SSF75217 2 154 3.14E-48 T 18-10-2018 IPR029028 Alpha/beta knot methyltransferases CH53_3065 71a76491964112c0f87628c6ee6cf0cf 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.47 T 18-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CH53_3065 71a76491964112c0f87628c6ee6cf0cf 156 Gene3D G3DSA:3.40.1280.10 1 156 4.5E-51 T 18-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH53_4024 715d4cca6b7ba867e014abb882f85c70 318 SUPERFAMILY SSF52402 4 152 1.84E-28 T 18-10-2018 CH53_4024 715d4cca6b7ba867e014abb882f85c70 318 SUPERFAMILY SSF52402 156 305 1.26E-23 T 18-10-2018 CH53_4024 715d4cca6b7ba867e014abb882f85c70 318 Gene3D G3DSA:3.40.50.12370 1 314 1.4E-131 T 18-10-2018 CH53_4024 715d4cca6b7ba867e014abb882f85c70 318 Pfam PF00582 Universal stress protein family 4 146 2.4E-20 T 18-10-2018 IPR006016 UspA CH53_4024 715d4cca6b7ba867e014abb882f85c70 318 Pfam PF00582 Universal stress protein family 176 300 8.8E-12 T 18-10-2018 IPR006016 UspA CH53_95 cfc49fc046350096939046cf3130319d 448 Gene3D G3DSA:2.60.40.1090 260 446 7.7E-7 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_95 cfc49fc046350096939046cf3130319d 448 PIRSF PIRSF029766 1 448 2.8E-114 T 18-10-2018 IPR011228 Uncharacterised conserved protein UCP029766 CH53_95 cfc49fc046350096939046cf3130319d 448 SUPERFAMILY SSF49401 265 446 1.09E-8 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_95 cfc49fc046350096939046cf3130319d 448 Pfam PF00419 Fimbrial protein 258 448 2.3E-28 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_3788 127463374d7436c0f87d173bda3264f4 576 SMART SM00836 460 576 1.2E-36 T 18-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CH53_3788 127463374d7436c0f87d173bda3264f4 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3788 127463374d7436c0f87d173bda3264f4 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 28.539 T 18-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CH53_3788 127463374d7436c0f87d173bda3264f4 576 Gene3D G3DSA:3.30.1360.70 1 106 1.9E-35 T 18-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CH53_3788 127463374d7436c0f87d173bda3264f4 576 SMART SM01016 5 87 2.2E-28 T 18-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CH53_3788 127463374d7436c0f87d173bda3264f4 576 SUPERFAMILY SSF52374 109 451 8.28E-95 T 18-10-2018 CH53_3788 127463374d7436c0f87d173bda3264f4 576 SUPERFAMILY SSF47323 454 576 4.38E-35 T 18-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3788 127463374d7436c0f87d173bda3264f4 576 Gene3D G3DSA:1.10.730.10 454 576 2.0E-32 T 18-10-2018 CH53_3788 127463374d7436c0f87d173bda3264f4 576 SUPERFAMILY SSF55190 2 96 2.35E-22 T 18-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CH53_3788 127463374d7436c0f87d173bda3264f4 576 Gene3D G3DSA:3.40.50.620 108 453 6.4E-108 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_3788 127463374d7436c0f87d173bda3264f4 576 Pfam PF00750 tRNA synthetases class I (R) 97 446 5.8E-168 T 18-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 CH53_3788 127463374d7436c0f87d173bda3264f4 576 Pfam PF05746 DALR anticodon binding domain 460 576 5.1E-34 T 18-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CH53_3788 127463374d7436c0f87d173bda3264f4 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 8.1E-22 T 18-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CH53_3788 127463374d7436c0f87d173bda3264f4 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 576 6.0E-205 T 18-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CH53_3788 127463374d7436c0f87d173bda3264f4 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 1.5E-25 T 18-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CH53_3788 127463374d7436c0f87d173bda3264f4 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 1.5E-25 T 18-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CH53_3788 127463374d7436c0f87d173bda3264f4 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 1.5E-25 T 18-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CH53_3788 127463374d7436c0f87d173bda3264f4 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 1.5E-25 T 18-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CH53_2439 b566211f7fbdd9cf14cfd290ba90837d 294 Pfam PF08021 Siderophore-interacting FAD-binding domain 15 130 1.7E-37 T 18-10-2018 IPR013113 FAD-binding 9, siderophore-interacting CH53_2439 b566211f7fbdd9cf14cfd290ba90837d 294 Gene3D G3DSA:2.40.30.10 3 130 8.3E-31 T 18-10-2018 CH53_2439 b566211f7fbdd9cf14cfd290ba90837d 294 Pfam PF04954 Siderophore-interacting protein 148 293 4.2E-32 T 18-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain CH53_2439 b566211f7fbdd9cf14cfd290ba90837d 294 Gene3D G3DSA:3.40.50.80 142 294 3.8E-20 T 18-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH53_2439 b566211f7fbdd9cf14cfd290ba90837d 294 SUPERFAMILY SSF63380 7 129 6.99E-11 T 18-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CH53_531 2b29c76c116b41a1317fabbad56a55b1 660 Pfam PF12704 MacB-like periplasmic core domain 284 503 6.4E-38 T 18-10-2018 IPR025857 MacB-like periplasmic core domain CH53_531 2b29c76c116b41a1317fabbad56a55b1 660 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_531 2b29c76c116b41a1317fabbad56a55b1 660 SUPERFAMILY SSF52540 10 233 6.83E-68 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_531 2b29c76c116b41a1317fabbad56a55b1 660 Gene3D G3DSA:3.40.50.300 8 287 3.5E-68 T 18-10-2018 CH53_531 2b29c76c116b41a1317fabbad56a55b1 660 SMART SM00382 39 226 4.0E-16 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_531 2b29c76c116b41a1317fabbad56a55b1 660 Pfam PF00005 ABC transporter 30 178 2.4E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_531 2b29c76c116b41a1317fabbad56a55b1 660 Pfam PF02687 FtsX-like permease family 565 653 2.1E-9 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CH53_3885 4936cef89be9b614e41672117013cdc0 98 Pfam PF03795 YCII-related domain 1 94 1.2E-26 T 18-10-2018 IPR005545 YCII-related CH53_3885 4936cef89be9b614e41672117013cdc0 98 Gene3D G3DSA:3.30.70.1060 1 98 2.2E-37 T 18-10-2018 CH53_3885 4936cef89be9b614e41672117013cdc0 98 SUPERFAMILY SSF54909 1 98 4.83E-30 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_959 b14d3a29646e044a8f3cfe4c50912e56 204 Pfam PF03458 UPF0126 domain 92 161 4.1E-19 T 18-10-2018 IPR005115 Uncharacterised domain UPF0126 CH53_959 b14d3a29646e044a8f3cfe4c50912e56 204 Pfam PF03458 UPF0126 domain 4 78 1.0E-22 T 18-10-2018 IPR005115 Uncharacterised domain UPF0126 CH53_325 8e5eea7fde1fe8eaea060920cdd382f9 401 Gene3D G3DSA:2.70.98.80 19 401 4.7E-135 T 18-10-2018 CH53_325 8e5eea7fde1fe8eaea060920cdd382f9 401 Pfam PF14486 Domain of unknown function (DUF4432) 63 367 2.2E-112 T 18-10-2018 IPR027839 Protein of unknown function DUF4432 CH53_845 64e4f02ceb1598a34319bf73f8ca9a1a 146 Gene3D G3DSA:3.40.1650.10 1 145 2.8E-43 T 18-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CH53_845 64e4f02ceb1598a34319bf73f8ca9a1a 146 Pfam PF05025 RbsD / FucU transport protein family 3 143 1.3E-32 T 18-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CH53_845 64e4f02ceb1598a34319bf73f8ca9a1a 146 SUPERFAMILY SSF102546 1 143 1.83E-35 T 18-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CH53_3556 ff231f7a6ef8cebac9aa5ad15434af5f 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 8.0E-27 T 18-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH53_3556 ff231f7a6ef8cebac9aa5ad15434af5f 260 Pfam PF00460 Flagella basal body rod protein 5 35 8.8E-14 T 18-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CH53_3556 ff231f7a6ef8cebac9aa5ad15434af5f 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 18-10-2018 IPR019776 Flagellar basal body rod protein, conserved site CH53_3556 ff231f7a6ef8cebac9aa5ad15434af5f 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 8.5E-119 T 18-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 CH53_3556 ff231f7a6ef8cebac9aa5ad15434af5f 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 2.8E-29 T 18-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CH53_3556 ff231f7a6ef8cebac9aa5ad15434af5f 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 1.9E-49 T 18-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CH53_3556 ff231f7a6ef8cebac9aa5ad15434af5f 260 SUPERFAMILY SSF117143 94 222 2.35E-35 T 18-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CH53_2345 30d774cdeeec98e9ddc76cfb9b832590 141 Pfam PF06853 Protein of unknown function (DUF1249) 22 135 2.8E-41 T 18-10-2018 IPR009659 Protein of unknown function DUF1249 CH53_2153 93bb32c90767bb396634c0e7af9d3477 169 Pfam PF01475 Ferric uptake regulator family 20 138 1.2E-13 T 18-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CH53_2153 93bb32c90767bb396634c0e7af9d3477 169 Gene3D G3DSA:3.30.1490.190 90 152 1.0E-15 T 18-10-2018 CH53_2153 93bb32c90767bb396634c0e7af9d3477 169 SUPERFAMILY SSF46785 12 144 2.27E-33 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2153 93bb32c90767bb396634c0e7af9d3477 169 Gene3D G3DSA:1.10.10.10 2 89 2.8E-36 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4078 7eb7b2e6b7a43a257164323b21cc6f99 286 Pfam PF08543 Phosphomethylpyrimidine kinase 90 263 2.9E-17 T 18-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CH53_4078 7eb7b2e6b7a43a257164323b21cc6f99 286 SUPERFAMILY SSF53613 1 274 2.18E-76 T 18-10-2018 IPR029056 Ribokinase-like CH53_4078 7eb7b2e6b7a43a257164323b21cc6f99 286 Gene3D G3DSA:3.40.1190.20 1 286 2.7E-92 T 18-10-2018 IPR029056 Ribokinase-like CH53_4078 7eb7b2e6b7a43a257164323b21cc6f99 286 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 286 54.107 T 18-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 CH53_4078 7eb7b2e6b7a43a257164323b21cc6f99 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 285 3.0E-131 T 18-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CH53_832 e2bd1bf47b676ae387901161a8ee00b6 507 Pfam PF00005 ABC transporter 279 434 7.8E-24 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_832 e2bd1bf47b676ae387901161a8ee00b6 507 SUPERFAMILY SSF52540 260 492 2.28E-45 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_832 e2bd1bf47b676ae387901161a8ee00b6 507 Pfam PF00005 ABC transporter 24 174 2.4E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_832 e2bd1bf47b676ae387901161a8ee00b6 507 SMART SM00382 33 222 1.2E-16 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_832 e2bd1bf47b676ae387901161a8ee00b6 507 SMART SM00382 287 483 1.8E-6 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_832 e2bd1bf47b676ae387901161a8ee00b6 507 Gene3D G3DSA:3.40.50.300 2 234 1.0E-55 T 18-10-2018 CH53_832 e2bd1bf47b676ae387901161a8ee00b6 507 Gene3D G3DSA:3.40.50.300 253 503 2.7E-45 T 18-10-2018 CH53_832 e2bd1bf47b676ae387901161a8ee00b6 507 SUPERFAMILY SSF52540 8 231 1.13E-54 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_832 e2bd1bf47b676ae387901161a8ee00b6 507 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2881 e170c44f73704e57c10cc6de67d4d054 67 Pfam PF05321 Haemolysin expression modulating protein 8 64 4.1E-33 T 18-10-2018 IPR007985 Haemolysin expression modulating, HHA CH53_2881 e170c44f73704e57c10cc6de67d4d054 67 SUPERFAMILY SSF68989 1 67 1.22E-30 T 18-10-2018 IPR036666 HHA superfamily CH53_2881 e170c44f73704e57c10cc6de67d4d054 67 Gene3D G3DSA:1.20.1280.40 1 67 3.7E-37 T 18-10-2018 IPR036666 HHA superfamily CH53_637 3f1b064c6d75368eb385c01cba78a177 1156 SMART SM00869 895 1145 6.9E-31 T 18-10-2018 IPR005546 Autotransporter beta-domain CH53_637 3f1b064c6d75368eb385c01cba78a177 1156 PRINTS PR01484 Pertactin virulence factor family signature 1111 1136 2.6E-8 T 18-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 CH53_637 3f1b064c6d75368eb385c01cba78a177 1156 PRINTS PR01484 Pertactin virulence factor family signature 1073 1094 2.6E-8 T 18-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 CH53_637 3f1b064c6d75368eb385c01cba78a177 1156 PRINTS PR01484 Pertactin virulence factor family signature 1136 1156 2.6E-8 T 18-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 CH53_637 3f1b064c6d75368eb385c01cba78a177 1156 PRINTS PR01484 Pertactin virulence factor family signature 1044 1067 2.6E-8 T 18-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 CH53_637 3f1b064c6d75368eb385c01cba78a177 1156 SUPERFAMILY SSF51126 463 851 1.0E-22 T 18-10-2018 IPR011050 Pectin lyase fold/virulence factor CH53_637 3f1b064c6d75368eb385c01cba78a177 1156 Pfam PF03797 Autotransporter beta-domain 898 1132 4.4E-37 T 18-10-2018 IPR005546 Autotransporter beta-domain CH53_637 3f1b064c6d75368eb385c01cba78a177 1156 SUPERFAMILY SSF103515 864 1156 6.28E-44 T 18-10-2018 IPR036709 Autotransporter beta-domain superfamily CH53_637 3f1b064c6d75368eb385c01cba78a177 1156 Gene3D G3DSA:2.40.128.130 854 1156 3.8E-55 T 18-10-2018 IPR036709 Autotransporter beta-domain superfamily CH53_637 3f1b064c6d75368eb385c01cba78a177 1156 Pfam PF03212 Pertactin 745 850 1.0E-12 T 18-10-2018 IPR004899 Pertactin, central region CH53_637 3f1b064c6d75368eb385c01cba78a177 1156 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 760 1156 6.4E-87 T 18-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CH53_637 3f1b064c6d75368eb385c01cba78a177 1156 Gene3D G3DSA:2.160.20.20 353 853 5.2E-35 T 18-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily CH53_4096 d40b30a9c9be01436dc12db4e82ca307 292 SUPERFAMILY SSF54001 155 286 4.86E-40 T 18-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CH53_4096 d40b30a9c9be01436dc12db4e82ca307 292 Pfam PF00877 NlpC/P60 family 174 284 7.1E-31 T 18-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain CH53_4096 d40b30a9c9be01436dc12db4e82ca307 292 Gene3D G3DSA:3.90.1720.10 80 285 6.9E-43 T 18-10-2018 CH53_4127 d62e35e543080374f17b285d0776a6c2 338 SUPERFAMILY SSF82649 248 336 1.31E-21 T 18-10-2018 CH53_4127 d62e35e543080374f17b285d0776a6c2 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 57.231 T 18-10-2018 IPR023741 Lipoate-protein ligase A GO:0009249|GO:0016979 KEGG: 00785+6.3.1.20 CH53_4127 d62e35e543080374f17b285d0776a6c2 338 SUPERFAMILY SSF55681 4 247 4.06E-79 T 18-10-2018 CH53_4127 d62e35e543080374f17b285d0776a6c2 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 326 2.1E-123 T 18-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 CH53_4127 d62e35e543080374f17b285d0776a6c2 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 157 2.3E-8 T 18-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CH53_4127 d62e35e543080374f17b285d0776a6c2 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 320 1.9E-17 T 18-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 CH53_4127 d62e35e543080374f17b285d0776a6c2 338 Gene3D G3DSA:3.30.930.10 2 249 2.8E-88 T 18-10-2018 CH53_4127 d62e35e543080374f17b285d0776a6c2 338 Gene3D G3DSA:3.30.390.50 250 338 1.1E-27 T 18-10-2018 CH53_379 4fc72e7f036bddb4ba5604ea8db6a6a5 187 PIRSF PIRSF000216 18 187 4.8E-52 T 18-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_379 4fc72e7f036bddb4ba5604ea8db6a6a5 187 Gene3D G3DSA:3.40.30.10 104 186 7.2E-23 T 18-10-2018 CH53_379 4fc72e7f036bddb4ba5604ea8db6a6a5 187 SUPERFAMILY SSF52833 36 186 9.39E-49 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_379 4fc72e7f036bddb4ba5604ea8db6a6a5 187 Gene3D G3DSA:1.10.10.1590 33 103 7.2E-18 T 18-10-2018 CH53_379 4fc72e7f036bddb4ba5604ea8db6a6a5 187 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 43 186 1.4E-51 T 18-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_379 4fc72e7f036bddb4ba5604ea8db6a6a5 187 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 45 186 4.4E-50 T 18-10-2018 CH53_379 4fc72e7f036bddb4ba5604ea8db6a6a5 187 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 144 162 - T 18-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_1801 fc9f3f8f7cb64e761eb2cd7286b61d77 328 Gene3D G3DSA:1.20.1270.170 149 307 2.0E-125 T 18-10-2018 CH53_1801 fc9f3f8f7cb64e761eb2cd7286b61d77 328 Pfam PF01636 Phosphotransferase enzyme family 33 258 9.6E-46 T 18-10-2018 IPR002575 Aminoglycoside phosphotransferase CH53_1801 fc9f3f8f7cb64e761eb2cd7286b61d77 328 Gene3D G3DSA:1.10.510.10 60 258 2.0E-125 T 18-10-2018 CH53_1801 fc9f3f8f7cb64e761eb2cd7286b61d77 328 Gene3D G3DSA:3.30.200.70 13 108 2.0E-125 T 18-10-2018 CH53_1801 fc9f3f8f7cb64e761eb2cd7286b61d77 328 SUPERFAMILY SSF56112 6 327 3.21E-89 T 18-10-2018 IPR011009 Protein kinase-like domain superfamily CH53_1801 fc9f3f8f7cb64e761eb2cd7286b61d77 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.822 T 18-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 CH53_3391 c545a692ca355716ede3c419a5e6ef7c 211 Gene3D G3DSA:3.40.50.1240 1 209 2.3E-53 T 18-10-2018 IPR029033 Histidine phosphatase superfamily CH53_3391 c545a692ca355716ede3c419a5e6ef7c 211 SUPERFAMILY SSF53254 1 206 3.85E-54 T 18-10-2018 IPR029033 Histidine phosphatase superfamily CH53_3391 c545a692ca355716ede3c419a5e6ef7c 211 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 200 7.3E-51 T 18-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CH53_3391 c545a692ca355716ede3c419a5e6ef7c 211 SMART SM00855 2 162 2.6E-20 T 18-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CH53_3391 c545a692ca355716ede3c419a5e6ef7c 211 PIRSF PIRSF000709 2 189 2.2E-6 T 18-10-2018 CH53_3391 c545a692ca355716ede3c419a5e6ef7c 211 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 18-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 CH53_3391 c545a692ca355716ede3c419a5e6ef7c 211 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 187 5.2E-49 T 18-10-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 CH53_1036 83cf71b777b782fd116c1ee226e8c04e 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 18-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CH53_1036 83cf71b777b782fd116c1ee226e8c04e 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 2.2E-135 T 18-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CH53_1036 83cf71b777b782fd116c1ee226e8c04e 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 8.7E-167 T 18-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CH53_1036 83cf71b777b782fd116c1ee226e8c04e 363 SMART SM01329 6 355 5.3E-200 T 18-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CH53_1036 83cf71b777b782fd116c1ee226e8c04e 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.533 T 18-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CH53_1036 83cf71b777b782fd116c1ee226e8c04e 363 SUPERFAMILY SSF53659 2 359 1.54E-122 T 18-10-2018 CH53_1036 83cf71b777b782fd116c1ee226e8c04e 363 Gene3D G3DSA:3.40.718.10 1 363 2.3E-156 T 18-10-2018 CH53_2392 adc31d45e64d661373f59bb872b512a6 432 Gene3D G3DSA:1.20.1600.10 36 427 2.0E-41 T 18-10-2018 CH53_2392 adc31d45e64d661373f59bb872b512a6 432 Pfam PF02321 Outer membrane efflux protein 43 228 3.3E-12 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CH53_2392 adc31d45e64d661373f59bb872b512a6 432 Pfam PF02321 Outer membrane efflux protein 250 426 2.6E-20 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CH53_2392 adc31d45e64d661373f59bb872b512a6 432 SUPERFAMILY SSF56954 19 426 2.49E-52 T 18-10-2018 CH53_2062 08dd54dddc61a0f3ef66b7d0e74e16dd 88 Pfam PF02416 mttA/Hcf106 family 4 49 4.6E-13 T 18-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CH53_2062 08dd54dddc61a0f3ef66b7d0e74e16dd 88 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 46 2.7E-20 T 18-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CH53_2062 08dd54dddc61a0f3ef66b7d0e74e16dd 88 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 83 22.924 T 18-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CH53_1024 a5267958a0cb463d0fa6e7fa224890f7 587 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 18 569 46.082 T 18-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_1024 a5267958a0cb463d0fa6e7fa224890f7 587 Gene3D G3DSA:3.90.1310.30 58 234 1.3E-44 T 18-10-2018 CH53_1024 a5267958a0cb463d0fa6e7fa224890f7 587 Pfam PF00905 Penicillin binding protein transpeptidase domain 259 553 1.4E-80 T 18-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CH53_1024 a5267958a0cb463d0fa6e7fa224890f7 587 Gene3D G3DSA:3.30.450.330 236 549 6.8E-111 T 18-10-2018 CH53_1024 a5267958a0cb463d0fa6e7fa224890f7 587 SUPERFAMILY SSF56519 62 233 7.32E-45 T 18-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 CH53_1024 a5267958a0cb463d0fa6e7fa224890f7 587 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 219 3.7E-18 T 18-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CH53_1024 a5267958a0cb463d0fa6e7fa224890f7 587 SUPERFAMILY SSF56601 234 562 1.53E-85 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CH53_1024 a5267958a0cb463d0fa6e7fa224890f7 587 Gene3D G3DSA:3.40.710.10 295 475 6.8E-111 T 18-10-2018 CH53_2585 7c38f80082f8f0cd9e8714f817e6b6b5 184 Pfam PF02325 YGGT family 108 170 1.6E-18 T 18-10-2018 IPR003425 CCB3/YggT GO:0016020 CH53_2585 7c38f80082f8f0cd9e8714f817e6b6b5 184 Pfam PF02325 YGGT family 10 76 6.7E-21 T 18-10-2018 IPR003425 CCB3/YggT GO:0016020 CH53_1352 bfd5800efe620a75275c9b14cb53f303 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 1.1E-130 T 18-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CH53_1352 bfd5800efe620a75275c9b14cb53f303 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 4.5E-6 T 18-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CH53_1352 bfd5800efe620a75275c9b14cb53f303 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 4.5E-6 T 18-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CH53_1352 bfd5800efe620a75275c9b14cb53f303 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 14 321 1.9E-46 T 18-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_1352 bfd5800efe620a75275c9b14cb53f303 325 SUPERFAMILY SSF55681 13 322 3.83E-81 T 18-10-2018 CH53_1352 bfd5800efe620a75275c9b14cb53f303 325 Gene3D G3DSA:3.30.930.10 1 325 5.3E-123 T 18-10-2018 CH53_1352 bfd5800efe620a75275c9b14cb53f303 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 56.777 T 18-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CH53_2227 de6c9ed71a49046cbea3f145727e27f8 642 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 501 633 2.7E-19 T 18-10-2018 IPR002178 PTS EIIA type-2 domain CH53_2227 de6c9ed71a49046cbea3f145727e27f8 642 Pfam PF08279 HTH domain 17 63 4.4E-7 T 18-10-2018 IPR013196 Helix-turn-helix, type 11 CH53_2227 de6c9ed71a49046cbea3f145727e27f8 642 Pfam PF05043 Mga helix-turn-helix domain 83 165 4.4E-13 T 18-10-2018 IPR007737 Mga helix-turn-helix domain CH53_2227 de6c9ed71a49046cbea3f145727e27f8 642 SUPERFAMILY SSF55804 495 634 1.06E-25 T 18-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CH53_2227 de6c9ed71a49046cbea3f145727e27f8 642 SUPERFAMILY SSF63520 297 396 1.7E-23 T 18-10-2018 IPR036634 PRD domain superfamily GO:0006355 CH53_2227 de6c9ed71a49046cbea3f145727e27f8 642 Gene3D G3DSA:1.10.10.10 11 153 3.5E-9 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2227 de6c9ed71a49046cbea3f145727e27f8 642 Pfam PF00874 PRD domain 305 391 2.2E-21 T 18-10-2018 IPR011608 PRD domain GO:0006355 CH53_2227 de6c9ed71a49046cbea3f145727e27f8 642 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 40 - T 18-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CH53_2227 de6c9ed71a49046cbea3f145727e27f8 642 SUPERFAMILY SSF52794 406 483 6.28E-9 T 18-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CH53_2227 de6c9ed71a49046cbea3f145727e27f8 642 Gene3D G3DSA:1.10.1790.10 298 394 4.9E-19 T 18-10-2018 CH53_2227 de6c9ed71a49046cbea3f145727e27f8 642 Gene3D G3DSA:3.40.50.2300 406 491 5.3E-5 T 18-10-2018 CH53_2227 de6c9ed71a49046cbea3f145727e27f8 642 Gene3D G3DSA:3.40.930.10 498 635 1.2E-18 T 18-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CH53_3399 959b94749f9cfb5ad1132a37787a0003 325 Pfam PF00072 Response regulator receiver domain 191 313 8.1E-13 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3399 959b94749f9cfb5ad1132a37787a0003 325 SMART SM00260 17 162 2.3E-19 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CH53_3399 959b94749f9cfb5ad1132a37787a0003 325 SMART SM00448 188 313 2.0E-9 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3399 959b94749f9cfb5ad1132a37787a0003 325 Gene3D G3DSA:2.40.50.180 46 162 5.4E-21 T 18-10-2018 CH53_3399 959b94749f9cfb5ad1132a37787a0003 325 SUPERFAMILY SSF50341 17 165 1.83E-24 T 18-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CH53_3399 959b94749f9cfb5ad1132a37787a0003 325 Gene3D G3DSA:2.30.30.40 37 156 5.4E-21 T 18-10-2018 CH53_3399 959b94749f9cfb5ad1132a37787a0003 325 PIRSF PIRSF002867 1 321 1.3E-98 T 18-10-2018 IPR024181 Chemotaxis response regulator CheV CH53_3399 959b94749f9cfb5ad1132a37787a0003 325 Pfam PF01584 CheW-like domain 22 164 1.1E-29 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CH53_3399 959b94749f9cfb5ad1132a37787a0003 325 SUPERFAMILY SSF52172 190 319 1.85E-20 T 18-10-2018 IPR011006 CheY-like superfamily CH53_3399 959b94749f9cfb5ad1132a37787a0003 325 Gene3D G3DSA:3.40.50.2300 173 325 2.7E-20 T 18-10-2018 CH53_68 9fc4f298b5d537448f5b4094f45398b7 293 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 283 3.3E-37 T 18-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CH53_68 9fc4f298b5d537448f5b4094f45398b7 293 Gene3D G3DSA:3.40.50.720 1 158 4.9E-52 T 18-10-2018 CH53_68 9fc4f298b5d537448f5b4094f45398b7 293 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 2 291 1.1E-133 T 18-10-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 CH53_68 9fc4f298b5d537448f5b4094f45398b7 293 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 160 2.1E-47 T 18-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 CH53_68 9fc4f298b5d537448f5b4094f45398b7 293 Gene3D G3DSA:1.10.1040.10 159 292 1.9E-37 T 18-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CH53_68 9fc4f298b5d537448f5b4094f45398b7 293 PIRSF PIRSF000103 1 292 9.5E-72 T 18-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CH53_68 9fc4f298b5d537448f5b4094f45398b7 293 SUPERFAMILY SSF51735 1 160 2.96E-42 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_68 9fc4f298b5d537448f5b4094f45398b7 293 SUPERFAMILY SSF48179 162 290 2.38E-35 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_33 caf48afc09341d59669a9e479d60eb4d 511 Gene3D G3DSA:1.20.1250.20 1 502 8.1E-160 T 18-10-2018 CH53_33 caf48afc09341d59669a9e479d60eb4d 511 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 501 3.2E-107 T 18-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 CH53_33 caf48afc09341d59669a9e479d60eb4d 511 SUPERFAMILY SSF103473 15 312 2.22E-24 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_33 caf48afc09341d59669a9e479d60eb4d 511 SUPERFAMILY SSF103473 337 499 6.8E-11 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_33 caf48afc09341d59669a9e479d60eb4d 511 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 79 103 - T 18-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CH53_33 caf48afc09341d59669a9e479d60eb4d 511 Pfam PF00854 POT family 91 200 1.2E-32 T 18-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 CH53_33 caf48afc09341d59669a9e479d60eb4d 511 Pfam PF00854 POT family 284 464 4.8E-32 T 18-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 CH53_33 caf48afc09341d59669a9e479d60eb4d 511 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 155 167 - T 18-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CH53_360 5700e3ed5bc49da1013581eefd4fe4a0 603 SUPERFAMILY SSF143975 1 418 3.01E-147 T 18-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CH53_360 5700e3ed5bc49da1013581eefd4fe4a0 603 SUPERFAMILY SSF52016 419 600 7.85E-58 T 18-10-2018 CH53_360 5700e3ed5bc49da1013581eefd4fe4a0 603 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 18-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CH53_360 5700e3ed5bc49da1013581eefd4fe4a0 603 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 18-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CH53_360 5700e3ed5bc49da1013581eefd4fe4a0 603 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 1 602 57.64 T 18-10-2018 CH53_360 5700e3ed5bc49da1013581eefd4fe4a0 603 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 601 0.0 T 18-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 CH53_360 5700e3ed5bc49da1013581eefd4fe4a0 603 Gene3D G3DSA:3.50.30.80 419 569 1.5E-50 T 18-10-2018 CH53_360 5700e3ed5bc49da1013581eefd4fe4a0 603 Pfam PF00920 Dehydratase family 67 598 1.7E-159 T 18-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CH53_2651 d84a56c30f4170c2712e72943d90c0d4 249 SUPERFAMILY SSF51735 6 247 2.34E-73 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2651 d84a56c30f4170c2712e72943d90c0d4 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CH53_2651 d84a56c30f4170c2712e72943d90c0d4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.6E-30 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2651 d84a56c30f4170c2712e72943d90c0d4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.6E-30 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2651 d84a56c30f4170c2712e72943d90c0d4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.6E-30 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2651 d84a56c30f4170c2712e72943d90c0d4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.6E-30 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2651 d84a56c30f4170c2712e72943d90c0d4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.6E-30 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2651 d84a56c30f4170c2712e72943d90c0d4 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 247 2.9E-58 T 18-10-2018 CH53_2651 d84a56c30f4170c2712e72943d90c0d4 249 Gene3D G3DSA:3.40.50.720 1 248 1.4E-74 T 18-10-2018 CH53_2651 d84a56c30f4170c2712e72943d90c0d4 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 181 2.0E-5 T 18-10-2018 CH53_585 baf5aa0235d33219dc4815eb12bb8809 347 SUPERFAMILY SSF55326 7 170 3.59E-53 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CH53_585 baf5aa0235d33219dc4815eb12bb8809 347 Gene3D G3DSA:3.90.650.10 171 346 3.7E-69 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CH53_585 baf5aa0235d33219dc4815eb12bb8809 347 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 334 2.9E-151 T 18-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CH53_585 baf5aa0235d33219dc4815eb12bb8809 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 164 2.5E-16 T 18-10-2018 IPR016188 PurM-like, N-terminal domain CH53_585 baf5aa0235d33219dc4815eb12bb8809 347 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 345 47.078 T 18-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CH53_585 baf5aa0235d33219dc4815eb12bb8809 347 Gene3D G3DSA:3.30.1330.10 6 170 4.2E-69 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CH53_585 baf5aa0235d33219dc4815eb12bb8809 347 SUPERFAMILY SSF56042 171 342 4.34E-62 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CH53_585 baf5aa0235d33219dc4815eb12bb8809 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 340 1.9E-37 T 18-10-2018 IPR010918 PurM-like, C-terminal domain CH53_353 3278f0478a30199553cd5b4f65d7fcad 469 Gene3D G3DSA:3.30.300.30 372 466 1.3E-12 T 18-10-2018 CH53_353 3278f0478a30199553cd5b4f65d7fcad 469 ProSitePatterns PS00455 Putative AMP-binding domain signature. 154 165 - T 18-10-2018 IPR020845 AMP-binding, conserved site CH53_353 3278f0478a30199553cd5b4f65d7fcad 469 SUPERFAMILY SSF56801 5 464 4.06E-89 T 18-10-2018 CH53_353 3278f0478a30199553cd5b4f65d7fcad 469 Gene3D G3DSA:3.40.50.12780 19 370 1.3E-67 T 18-10-2018 CH53_353 3278f0478a30199553cd5b4f65d7fcad 469 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 42 461 4.3E-118 T 18-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 CH53_353 3278f0478a30199553cd5b4f65d7fcad 469 Pfam PF00501 AMP-binding enzyme 24 371 7.9E-51 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CH53_1021 d75949fcd396e7ab89136d09b6f5c5e6 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 18-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_1021 d75949fcd396e7ab89136d09b6f5c5e6 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.2E-5 T 18-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_1021 d75949fcd396e7ab89136d09b6f5c5e6 360 Pfam PF00953 Glycosyl transferase family 4 99 284 1.2E-35 T 18-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 CH53_1021 d75949fcd396e7ab89136d09b6f5c5e6 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 1.9E-159 T 18-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_1021 d75949fcd396e7ab89136d09b6f5c5e6 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.949 T 18-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_1021 d75949fcd396e7ab89136d09b6f5c5e6 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 18-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CH53_3050 567c33d8bd1bba45805cfb2281f5678d 214 Pfam PF00149 Calcineurin-like phosphoesterase 12 187 8.4E-15 T 18-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CH53_3050 567c33d8bd1bba45805cfb2281f5678d 214 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 70 75 - T 18-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CH53_3050 567c33d8bd1bba45805cfb2281f5678d 214 SUPERFAMILY SSF56300 4 213 4.09E-47 T 18-10-2018 CH53_3050 567c33d8bd1bba45805cfb2281f5678d 214 Gene3D G3DSA:3.60.21.10 1 214 7.7E-60 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like CH53_3820 a2b0b4bcb92f6b741c68854ddb97ee92 373 Gene3D G3DSA:1.10.150.80 195 293 2.1E-23 T 18-10-2018 CH53_3820 a2b0b4bcb92f6b741c68854ddb97ee92 373 TIGRFAM TIGR01388 rnd: ribonuclease D 5 369 1.5E-144 T 18-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CH53_3820 a2b0b4bcb92f6b741c68854ddb97ee92 373 SMART SM00341 210 289 1.2E-16 T 18-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CH53_3820 a2b0b4bcb92f6b741c68854ddb97ee92 373 SMART SM00474 3 171 6.5E-41 T 18-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CH53_3820 a2b0b4bcb92f6b741c68854ddb97ee92 373 SUPERFAMILY SSF53098 2 210 1.8E-62 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_3820 a2b0b4bcb92f6b741c68854ddb97ee92 373 Gene3D G3DSA:1.10.150.80 294 373 9.6E-28 T 18-10-2018 CH53_3820 a2b0b4bcb92f6b741c68854ddb97ee92 373 SUPERFAMILY SSF47819 194 300 1.55E-29 T 18-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 CH53_3820 a2b0b4bcb92f6b741c68854ddb97ee92 373 SUPERFAMILY SSF47819 296 372 1.83E-21 T 18-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 CH53_3820 a2b0b4bcb92f6b741c68854ddb97ee92 373 Pfam PF01612 3'-5' exonuclease 3 168 8.2E-35 T 18-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CH53_3820 a2b0b4bcb92f6b741c68854ddb97ee92 373 Pfam PF00570 HRDC domain 213 279 1.3E-15 T 18-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CH53_3820 a2b0b4bcb92f6b741c68854ddb97ee92 373 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 45.452 T 18-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CH53_3820 a2b0b4bcb92f6b741c68854ddb97ee92 373 Gene3D G3DSA:3.30.420.10 1 194 8.5E-64 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CH53_4411 f4bf948184c2b6b58d1c77fe2fdbe1b6 303 Gene3D G3DSA:3.30.420.40 4 297 3.0E-89 T 18-10-2018 CH53_4411 f4bf948184c2b6b58d1c77fe2fdbe1b6 303 Gene3D G3DSA:3.30.420.40 119 290 3.0E-89 T 18-10-2018 CH53_4411 f4bf948184c2b6b58d1c77fe2fdbe1b6 303 SUPERFAMILY SSF53067 1 301 5.28E-58 T 18-10-2018 CH53_4411 f4bf948184c2b6b58d1c77fe2fdbe1b6 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 66.274 T 18-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 CH53_4411 f4bf948184c2b6b58d1c77fe2fdbe1b6 303 Pfam PF00480 ROK family 2 300 1.4E-68 T 18-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CH53_4411 f4bf948184c2b6b58d1c77fe2fdbe1b6 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 18-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CH53_4020 b59b8bea3c0a75ea3316ba16ca448fff 172 Pfam PF04463 Protein of unknown function (DUF523) 8 153 1.6E-43 T 18-10-2018 IPR007553 Domain of unknown function DUF523 CH53_594 9da37cf7e7820c4be40662a10f578a41 64 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 3 51 1.0E-16 T 18-10-2018 IPR022576 Protein of unknown function DUF2633 CH53_594 9da37cf7e7820c4be40662a10f578a41 64 Pfam PF11119 Protein of unknown function (DUF2633) 2 58 3.3E-31 T 18-10-2018 IPR022576 Protein of unknown function DUF2633 CH53_2982 65b061bd2211638ba4f50ed800e2589e 48 SUPERFAMILY SSF56349 1 29 2.33E-5 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CH53_3814 3d3d55011e8ae0dc991857ca3657a727 109 Gene3D G3DSA:1.10.3730.20 7 109 9.8E-28 T 18-10-2018 CH53_3814 3d3d55011e8ae0dc991857ca3657a727 109 Pfam PF00893 Small Multidrug Resistance protein 10 99 1.5E-26 T 18-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CH53_3814 3d3d55011e8ae0dc991857ca3657a727 109 SUPERFAMILY SSF103481 11 108 2.09E-17 T 18-10-2018 CH53_3814 3d3d55011e8ae0dc991857ca3657a727 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 30.1 T 18-10-2018 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 CH53_2717 83265c6a862322f1c94c81dab19507b8 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 8.5E-161 T 18-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CH53_2717 83265c6a862322f1c94c81dab19507b8 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 7.4E-12 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_2717 83265c6a862322f1c94c81dab19507b8 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 18-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CH53_2717 83265c6a862322f1c94c81dab19507b8 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 2.7E-25 T 18-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CH53_2717 83265c6a862322f1c94c81dab19507b8 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.685 T 18-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CH53_2717 83265c6a862322f1c94c81dab19507b8 274 SUPERFAMILY SSF51161 1 256 4.16E-80 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily CH53_2717 83265c6a862322f1c94c81dab19507b8 274 Gene3D G3DSA:1.10.166.10 1 70 1.0E-34 T 18-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 CH53_2717 83265c6a862322f1c94c81dab19507b8 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 5.5E-4 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_2717 83265c6a862322f1c94c81dab19507b8 274 Gene3D G3DSA:2.160.10.10 87 257 1.6E-57 T 18-10-2018 CH53_3330 926b01d374de256209eab55098087f8f 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 2.3E-64 T 18-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CH53_3330 926b01d374de256209eab55098087f8f 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 36.318 T 18-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CH53_3330 926b01d374de256209eab55098087f8f 355 SUPERFAMILY SSF56784 1 156 3.12E-37 T 18-10-2018 IPR036412 HAD-like superfamily CH53_3330 926b01d374de256209eab55098087f8f 355 Gene3D G3DSA:3.40.50.1000 1 162 3.5E-43 T 18-10-2018 IPR023214 HAD superfamily CH53_3330 926b01d374de256209eab55098087f8f 355 SUPERFAMILY SSF54211 252 342 2.28E-31 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_3330 926b01d374de256209eab55098087f8f 355 SUPERFAMILY SSF54211 167 251 1.52E-30 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_3330 926b01d374de256209eab55098087f8f 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 2.2E-77 T 18-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 CH53_3330 926b01d374de256209eab55098087f8f 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 148 3.2E-24 T 18-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CH53_3330 926b01d374de256209eab55098087f8f 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 18-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CH53_3330 926b01d374de256209eab55098087f8f 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 50.739 T 18-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 CH53_3330 926b01d374de256209eab55098087f8f 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 18-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CH53_3330 926b01d374de256209eab55098087f8f 355 Pfam PF13242 HAD-hyrolase-like 103 146 7.6E-6 T 18-10-2018 CH53_3330 926b01d374de256209eab55098087f8f 355 Gene3D G3DSA:3.30.230.40 255 355 1.7E-35 T 18-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 CH53_3330 926b01d374de256209eab55098087f8f 355 Gene3D G3DSA:3.30.230.40 163 254 9.0E-35 T 18-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 CH53_3330 926b01d374de256209eab55098087f8f 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 4.0E-44 T 18-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 Gene3D G3DSA:3.40.50.670 391 624 1.2E-94 T 18-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 3.8E-154 T 18-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 3.8E-154 T 18-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 3.8E-154 T 18-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 3.8E-154 T 18-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 3.8E-154 T 18-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 3.8E-154 T 18-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 3.8E-154 T 18-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 3.8E-154 T 18-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 3.8E-154 T 18-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 3.8E-154 T 18-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 3.8E-154 T 18-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 3.8E-154 T 18-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 3.8E-154 T 18-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 3.8E-154 T 18-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 SUPERFAMILY SSF55874 6 216 6.16E-70 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 Pfam PF01751 Toprim domain 414 523 2.8E-12 T 18-10-2018 IPR006171 TOPRIM domain CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 171 1.3E-16 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 18-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 626 0.0 T 18-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 621 1.0E-23 T 18-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR00418 DNA topoisomerase II family signature 110 124 4.5E-59 T 18-10-2018 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR00418 DNA topoisomerase II family signature 67 80 4.5E-59 T 18-10-2018 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 4.5E-59 T 18-10-2018 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 4.5E-59 T 18-10-2018 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR00418 DNA topoisomerase II family signature 32 47 4.5E-59 T 18-10-2018 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 4.5E-59 T 18-10-2018 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 4.5E-59 T 18-10-2018 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR00418 DNA topoisomerase II family signature 561 577 4.5E-59 T 18-10-2018 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 4.5E-59 T 18-10-2018 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 SMART SM00433 35 625 1.8E-211 T 18-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 SUPERFAMILY SSF54211 218 383 4.55E-46 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 Gene3D G3DSA:3.30.230.10 217 390 1.4E-58 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 SMART SM00387 28 174 1.2E-20 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 SUPERFAMILY SSF56719 389 622 8.11E-78 T 18-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 Pfam PF00204 DNA gyrase B 219 385 3.1E-39 T 18-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 Gene3D G3DSA:3.30.565.10 4 216 8.3E-77 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_2348 efc8d216b8b04ed6a5bd48239d3c6651 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 47.11 T 18-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_119 6ffea7fbc91c5ad323c457a6762458bd 181 Pfam PF01638 HxlR-like helix-turn-helix 20 104 1.6E-19 T 18-10-2018 IPR002577 Helix-turn-helix, HxlR type CH53_119 6ffea7fbc91c5ad323c457a6762458bd 181 SUPERFAMILY SSF46785 7 143 3.67E-37 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_119 6ffea7fbc91c5ad323c457a6762458bd 181 Gene3D G3DSA:1.10.10.10 1 168 4.2E-50 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3521 9d784a91d35f303111dcccf134adc3e4 177 Pfam PF10777 Inner membrane protein YlaC 1 153 6.5E-70 T 18-10-2018 IPR019713 Inner membrane protein YlaC CH53_1231 faacf3ca9bd3f5f4b53ed73f3b278c8b 988 SUPERFAMILY SSF52540 56 281 6.95E-16 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1231 faacf3ca9bd3f5f4b53ed73f3b278c8b 988 Gene3D G3DSA:3.40.50.300 67 272 1.2E-11 T 18-10-2018 CH53_1231 faacf3ca9bd3f5f4b53ed73f3b278c8b 988 Gene3D G3DSA:3.40.50.300 381 595 3.2E-10 T 18-10-2018 CH53_1231 faacf3ca9bd3f5f4b53ed73f3b278c8b 988 SUPERFAMILY SSF52540 85 565 4.14E-9 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1231 faacf3ca9bd3f5f4b53ed73f3b278c8b 988 Pfam PF04851 Type III restriction enzyme, res subunit 10 251 1.1E-13 T 18-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CH53_1146 c12e3035fd791b28d78bd937f4aa7c73 573 Gene3D G3DSA:3.30.420.40 14 342 1.5E-55 T 18-10-2018 CH53_1146 c12e3035fd791b28d78bd937f4aa7c73 573 Pfam PF16861 Carbamoyltransferase C-terminus 395 564 3.3E-71 T 18-10-2018 IPR031730 Carbamoyltransferase, C-terminal CH53_1146 c12e3035fd791b28d78bd937f4aa7c73 573 SUPERFAMILY SSF53067 22 348 3.11E-5 T 18-10-2018 CH53_1146 c12e3035fd791b28d78bd937f4aa7c73 573 Gene3D G3DSA:3.30.420.350 98 335 1.5E-55 T 18-10-2018 CH53_1146 c12e3035fd791b28d78bd937f4aa7c73 573 Pfam PF02543 Carbamoyltransferase N-terminus 92 340 5.9E-23 T 18-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 CH53_1146 c12e3035fd791b28d78bd937f4aa7c73 573 Pfam PF02543 Carbamoyltransferase N-terminus 7 67 1.4E-10 T 18-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 CH53_1146 c12e3035fd791b28d78bd937f4aa7c73 573 Gene3D G3DSA:3.90.870.20 358 563 5.7E-82 T 18-10-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily CH53_3644 9451ec528dce490f19ea6019740d5757 237 Pfam PF05876 Phage terminase large subunit (GpA) 33 235 1.1E-65 T 18-10-2018 IPR008866 Bacteriophage lambda, GpA CH53_3644 9451ec528dce490f19ea6019740d5757 237 Gene3D G3DSA:3.40.50.300 22 221 2.9E-7 T 18-10-2018 CH53_3945 b9679dc711e313ac38d9d918870a8ec3 327 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 26 318 1.5E-86 T 18-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH53_3945 b9679dc711e313ac38d9d918870a8ec3 327 Gene3D G3DSA:3.40.50.2300 132 317 4.8E-134 T 18-10-2018 CH53_3945 b9679dc711e313ac38d9d918870a8ec3 327 PIRSF PIRSF002816 2 326 2.3E-150 T 18-10-2018 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 CH53_3945 b9679dc711e313ac38d9d918870a8ec3 327 SUPERFAMILY SSF53822 26 323 2.17E-68 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_3945 b9679dc711e313ac38d9d918870a8ec3 327 Gene3D G3DSA:3.40.50.2300 27 308 4.8E-134 T 18-10-2018 CH53_966 da2bb62b2a384bea996ea888f8667fd2 264 SMART SM00382 35 223 1.6E-15 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_966 da2bb62b2a384bea996ea888f8667fd2 264 Pfam PF00005 ABC transporter 26 175 1.1E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_966 da2bb62b2a384bea996ea888f8667fd2 264 SUPERFAMILY SSF52540 13 237 1.33E-60 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_966 da2bb62b2a384bea996ea888f8667fd2 264 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_966 da2bb62b2a384bea996ea888f8667fd2 264 Gene3D G3DSA:3.40.50.300 2 257 6.9E-68 T 18-10-2018 CH53_2748 f72b5655b6cc0fb4b9c6e0d154cdce0a 135 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 134 36.586 T 18-10-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 CH53_2748 f72b5655b6cc0fb4b9c6e0d154cdce0a 135 Gene3D G3DSA:3.30.110.70 31 135 3.7E-38 T 18-10-2018 CH53_2748 f72b5655b6cc0fb4b9c6e0d154cdce0a 135 Pfam PF16358 RcsF lipoprotein 31 133 2.6E-52 T 18-10-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 CH53_1614 1567b9a7cd920489662cac7224412394 300 SUPERFAMILY SSF103481 38 141 5.89E-13 T 18-10-2018 CH53_1614 1567b9a7cd920489662cac7224412394 300 Pfam PF00892 EamA-like transporter family 153 283 1.6E-18 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_1614 1567b9a7cd920489662cac7224412394 300 Pfam PF00892 EamA-like transporter family 11 138 8.8E-11 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_1614 1567b9a7cd920489662cac7224412394 300 SUPERFAMILY SSF103481 187 286 1.83E-15 T 18-10-2018 CH53_519 fb3268a59a11c44cc3a11f65f2a92d92 111 Pfam PF14282 FlxA-like protein 9 103 2.7E-20 T 18-10-2018 IPR025577 FlxA-like protein CH53_1822 a0726f5f524a9b8c5d2fad3b52f47df0 461 TIGRFAM TIGR03173 pbuX: xanthine permease 38 458 1.9E-127 T 18-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 CH53_1822 a0726f5f524a9b8c5d2fad3b52f47df0 461 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 28 456 4.9E-139 T 18-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CH53_1822 a0726f5f524a9b8c5d2fad3b52f47df0 461 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 374 394 - T 18-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CH53_1822 a0726f5f524a9b8c5d2fad3b52f47df0 461 Pfam PF00860 Permease family 33 425 3.8E-108 T 18-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CH53_773 86954cb1fb96497ade8904d7e823994e 154 PIRSF PIRSF020565 1 152 5.5E-42 T 18-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted CH53_773 86954cb1fb96497ade8904d7e823994e 154 SUPERFAMILY SSF54637 7 142 1.28E-22 T 18-10-2018 IPR029069 HotDog domain superfamily CH53_773 86954cb1fb96497ade8904d7e823994e 154 Gene3D G3DSA:3.10.129.10 2 142 3.6E-19 T 18-10-2018 CH53_1743 dc757d28f95372b60a455b5b614ab374 449 SMART SM00387 330 438 4.0E-30 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_1743 dc757d28f95372b60a455b5b614ab374 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 7.4E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1743 dc757d28f95372b60a455b5b614ab374 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 7.4E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1743 dc757d28f95372b60a455b5b614ab374 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 7.4E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1743 dc757d28f95372b60a455b5b614ab374 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 7.4E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CH53_1743 dc757d28f95372b60a455b5b614ab374 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 436 5.9E-22 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_1743 dc757d28f95372b60a455b5b614ab374 449 SUPERFAMILY SSF55874 275 440 7.6E-38 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1743 dc757d28f95372b60a455b5b614ab374 449 Gene3D G3DSA:3.30.565.10 289 447 1.3E-37 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1743 dc757d28f95372b60a455b5b614ab374 449 Gene3D G3DSA:1.10.287.130 226 286 7.5E-13 T 18-10-2018 CH53_1743 dc757d28f95372b60a455b5b614ab374 449 SUPERFAMILY SSF47384 213 282 4.51E-9 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CH53_1743 dc757d28f95372b60a455b5b614ab374 449 SMART SM00388 221 288 1.4E-5 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_1743 dc757d28f95372b60a455b5b614ab374 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 283 2.5E-8 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CH53_394 fb401a281601364cfcaa329ac08ca99e 147 SUPERFAMILY SSF55804 1 145 5.76E-41 T 18-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CH53_394 fb401a281601364cfcaa329ac08ca99e 147 Gene3D G3DSA:3.40.930.10 1 147 1.9E-59 T 18-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CH53_394 fb401a281601364cfcaa329ac08ca99e 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 3.9E-37 T 18-10-2018 IPR002178 PTS EIIA type-2 domain CH53_2006 9de7997a2cd278b0dd560b8fe35c7cf9 296 SUPERFAMILY SSF103481 189 285 4.58E-8 T 18-10-2018 CH53_2006 9de7997a2cd278b0dd560b8fe35c7cf9 296 Pfam PF00892 EamA-like transporter family 9 142 1.8E-16 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_2006 9de7997a2cd278b0dd560b8fe35c7cf9 296 TIGRFAM TIGR00688 rarD: protein RarD 8 261 1.1E-99 T 18-10-2018 IPR004626 RarD protein GO:0005887 CH53_2006 9de7997a2cd278b0dd560b8fe35c7cf9 296 SUPERFAMILY SSF103481 43 145 6.28E-15 T 18-10-2018 CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 Gene3D G3DSA:1.10.40.30 363 433 2.3E-148 T 18-10-2018 CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.086 T 18-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 Gene3D G3DSA:1.20.200.10 108 446 2.3E-148 T 18-10-2018 CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 6.1E-68 T 18-10-2018 CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 6.1E-68 T 18-10-2018 CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 6.1E-68 T 18-10-2018 CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 6.1E-68 T 18-10-2018 CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 6.1E-68 T 18-10-2018 CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 6.1E-68 T 18-10-2018 CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 18-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 SUPERFAMILY SSF48557 3 456 6.44E-141 T 18-10-2018 IPR008948 L-Aspartase-like GO:0003824 CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 1.4E-210 T 18-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 Pfam PF00206 Lyase 6 301 2.2E-98 T 18-10-2018 IPR022761 Fumarate lyase, N-terminal CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.7E-28 T 18-10-2018 IPR000362 Fumarate lyase family CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.7E-28 T 18-10-2018 IPR000362 Fumarate lyase family CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.7E-28 T 18-10-2018 IPR000362 Fumarate lyase family CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.7E-28 T 18-10-2018 IPR000362 Fumarate lyase family CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 Gene3D G3DSA:1.10.275.10 1 107 9.8E-38 T 18-10-2018 IPR024083 Fumarase/histidase, N-terminal CH53_1915 eadc8243b87ad3137cd1ee129879cec2 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.4E-22 T 18-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CH53_4213 720c53d6897b67699b3ee5e52a9381ef 156 SUPERFAMILY SSF50249 31 156 4.28E-11 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_4213 720c53d6897b67699b3ee5e52a9381ef 156 Gene3D G3DSA:2.40.50.140 14 145 4.0E-5 T 18-10-2018 CH53_3850 fab501145ba5c3e300eacc1357a4d17a 216 Gene3D G3DSA:3.40.50.850 1 210 1.4E-62 T 18-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CH53_3850 fab501145ba5c3e300eacc1357a4d17a 216 Pfam PF00857 Isochorismatase family 4 206 7.9E-37 T 18-10-2018 IPR000868 Isochorismatase-like GO:0003824 CH53_3850 fab501145ba5c3e300eacc1357a4d17a 216 SUPERFAMILY SSF52499 2 211 1.7E-55 T 18-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CH53_2013 b570d1da7a4cb9bc2da784fde93e4325 269 SUPERFAMILY SSF56784 1 265 6.12E-68 T 18-10-2018 IPR036412 HAD-like superfamily CH53_2013 b570d1da7a4cb9bc2da784fde93e4325 269 Gene3D G3DSA:3.30.1240.10 82 186 6.6E-80 T 18-10-2018 CH53_2013 b570d1da7a4cb9bc2da784fde93e4325 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 18-10-2018 CH53_2013 b570d1da7a4cb9bc2da784fde93e4325 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 1.4E-25 T 18-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CH53_2013 b570d1da7a4cb9bc2da784fde93e4325 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 4.2E-60 T 18-10-2018 CH53_2013 b570d1da7a4cb9bc2da784fde93e4325 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 5.3E-62 T 18-10-2018 IPR000150 Cof family GO:0016787 CH53_2013 b570d1da7a4cb9bc2da784fde93e4325 269 Gene3D G3DSA:3.40.50.1000 5 256 6.6E-80 T 18-10-2018 IPR023214 HAD superfamily CH53_294 00ad3977c934c06d6caaed2a233505e3 171 Pfam PF00959 Phage lysozyme 46 151 6.9E-22 T 18-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CH53_294 00ad3977c934c06d6caaed2a233505e3 171 SUPERFAMILY SSF53955 4 160 3.68E-51 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily CH53_294 00ad3977c934c06d6caaed2a233505e3 171 Gene3D G3DSA:1.10.530.40 1 160 6.2E-49 T 18-10-2018 CH53_116 13fb40917cc718a91902254dc875ec4d 151 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 6.6E-31 T 18-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain CH53_116 13fb40917cc718a91902254dc875ec4d 151 Gene3D G3DSA:1.10.1220.10 98 150 1.6E-34 T 18-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CH53_116 13fb40917cc718a91902254dc875ec4d 151 Pfam PF06303 MatP N-terminal domain 2 85 1.1E-43 T 18-10-2018 IPR035087 MatP, N-terminal CH53_116 13fb40917cc718a91902254dc875ec4d 151 Gene3D G3DSA:1.20.1270.380 1 89 6.5E-47 T 18-10-2018 IPR038339 MatP, N-terminal domain superfamily CH53_116 13fb40917cc718a91902254dc875ec4d 151 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.565 T 18-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 CH53_116 13fb40917cc718a91902254dc875ec4d 151 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 8.0E-62 T 18-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 CH53_1980 6d04de0feb1a713c435980800989346a 418 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 39.899 T 18-10-2018 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 CH53_1980 6d04de0feb1a713c435980800989346a 418 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 6.8E-13 T 18-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CH53_143 9bd189660feff4e94efa0a06d094f229 297 Pfam PF03881 Fructosamine kinase 26 274 3.3E-10 T 18-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CH53_143 9bd189660feff4e94efa0a06d094f229 297 Gene3D G3DSA:3.90.1200.10 103 292 8.8E-10 T 18-10-2018 CH53_143 9bd189660feff4e94efa0a06d094f229 297 SUPERFAMILY SSF56112 14 268 3.23E-20 T 18-10-2018 IPR011009 Protein kinase-like domain superfamily CH53_3722 33be9507a3322ad54c3d323801776ef2 262 Gene3D G3DSA:3.40.50.300 54 262 6.8E-65 T 18-10-2018 CH53_3722 33be9507a3322ad54c3d323801776ef2 262 Pfam PF02562 PhoH-like protein 57 261 2.2E-76 T 18-10-2018 IPR003714 PhoH-like protein GO:0005524 CH53_3722 33be9507a3322ad54c3d323801776ef2 262 SUPERFAMILY SSF52540 57 239 8.4E-30 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_956 c05fea9f1727063a2ccf7d83bcfc9f47 505 SUPERFAMILY SSF109604 26 502 7.07E-63 T 18-10-2018 CH53_956 c05fea9f1727063a2ccf7d83bcfc9f47 505 Gene3D G3DSA:1.10.3210.10 146 257 9.0E-16 T 18-10-2018 CH53_956 c05fea9f1727063a2ccf7d83bcfc9f47 505 Gene3D G3DSA:1.10.3210.10 1 143 4.4E-44 T 18-10-2018 CH53_956 c05fea9f1727063a2ccf7d83bcfc9f47 505 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 31 503 2.4E-125 T 18-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 CH53_956 c05fea9f1727063a2ccf7d83bcfc9f47 505 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 505 52.592 T 18-10-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 CH53_956 c05fea9f1727063a2ccf7d83bcfc9f47 505 Pfam PF13286 Phosphohydrolase-associated domain 432 500 3.3E-6 T 18-10-2018 IPR026875 Phosphohydrolase-associated domain CH53_956 c05fea9f1727063a2ccf7d83bcfc9f47 505 Gene3D G3DSA:1.10.3410.10 260 390 9.1E-22 T 18-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 CH53_956 c05fea9f1727063a2ccf7d83bcfc9f47 505 Pfam PF01966 HD domain 66 134 1.7E-10 T 18-10-2018 IPR006674 HD domain CH53_956 c05fea9f1727063a2ccf7d83bcfc9f47 505 SMART SM00471 62 282 8.7E-12 T 18-10-2018 IPR003607 HD/PDEase domain CH53_1927 e07099cdb794c98943de6946088fcf39 243 Pfam PF00462 Glutaredoxin 173 231 7.4E-19 T 18-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CH53_1927 e07099cdb794c98943de6946088fcf39 243 PRINTS PR00160 Glutaredoxin signature 173 191 2.7E-14 T 18-10-2018 IPR014025 Glutaredoxin subgroup CH53_1927 e07099cdb794c98943de6946088fcf39 243 PRINTS PR00160 Glutaredoxin signature 228 241 2.7E-14 T 18-10-2018 IPR014025 Glutaredoxin subgroup CH53_1927 e07099cdb794c98943de6946088fcf39 243 PRINTS PR00160 Glutaredoxin signature 214 227 2.7E-14 T 18-10-2018 IPR014025 Glutaredoxin subgroup CH53_1927 e07099cdb794c98943de6946088fcf39 243 Gene3D G3DSA:3.40.30.10 171 242 3.8E-25 T 18-10-2018 CH53_1927 e07099cdb794c98943de6946088fcf39 243 SUPERFAMILY SSF52833 2 241 6.82E-46 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_1927 e07099cdb794c98943de6946088fcf39 243 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 18-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CH53_1927 e07099cdb794c98943de6946088fcf39 243 Pfam PF08534 Redoxin 5 160 4.7E-33 T 18-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CH53_1927 e07099cdb794c98943de6946088fcf39 243 Gene3D G3DSA:3.40.30.10 4 165 1.0E-62 T 18-10-2018 CH53_1927 e07099cdb794c98943de6946088fcf39 243 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 9.8E-40 T 18-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 CH53_1892 f1d37afaec68cbd28c66a176a57f51b5 248 SUPERFAMILY SSF52343 104 248 3.14E-38 T 18-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH53_1892 f1d37afaec68cbd28c66a176a57f51b5 248 Gene3D G3DSA:3.40.50.80 97 248 4.7E-41 T 18-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH53_1892 f1d37afaec68cbd28c66a176a57f51b5 248 SUPERFAMILY SSF63380 3 99 9.32E-24 T 18-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CH53_1892 f1d37afaec68cbd28c66a176a57f51b5 248 Gene3D G3DSA:2.40.30.10 1 96 1.6E-30 T 18-10-2018 CH53_1892 f1d37afaec68cbd28c66a176a57f51b5 248 Pfam PF00970 Oxidoreductase FAD-binding domain 19 90 2.7E-7 T 18-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CH53_1892 f1d37afaec68cbd28c66a176a57f51b5 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 2.8E-18 T 18-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CH53_1929 ef8c9a80a908f0f2bfa4f07043a6da2e 310 Gene3D G3DSA:3.40.190.10 91 280 1.6E-75 T 18-10-2018 CH53_1929 ef8c9a80a908f0f2bfa4f07043a6da2e 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.6E-19 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1929 ef8c9a80a908f0f2bfa4f07043a6da2e 310 Pfam PF03466 LysR substrate binding domain 88 293 2.1E-51 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_1929 ef8c9a80a908f0f2bfa4f07043a6da2e 310 Gene3D G3DSA:3.40.190.10 164 267 1.6E-75 T 18-10-2018 CH53_1929 ef8c9a80a908f0f2bfa4f07043a6da2e 310 SUPERFAMILY SSF46785 1 110 9.53E-22 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1929 ef8c9a80a908f0f2bfa4f07043a6da2e 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-8 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1929 ef8c9a80a908f0f2bfa4f07043a6da2e 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-8 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1929 ef8c9a80a908f0f2bfa4f07043a6da2e 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-8 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1929 ef8c9a80a908f0f2bfa4f07043a6da2e 310 SUPERFAMILY SSF53850 89 296 5.27E-45 T 18-10-2018 CH53_1929 ef8c9a80a908f0f2bfa4f07043a6da2e 310 Gene3D G3DSA:1.10.10.10 1 84 2.9E-28 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3543 62aff784de262b7dd7e3e6a1dde68d84 214 PIRSF PIRSF002884 1 214 2.0E-87 T 18-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 CH53_3543 62aff784de262b7dd7e3e6a1dde68d84 214 SUPERFAMILY SSF75708 13 213 9.29E-66 T 18-10-2018 CH53_3543 62aff784de262b7dd7e3e6a1dde68d84 214 Pfam PF04344 Chemotaxis phosphatase, CheZ 16 214 2.8E-76 T 18-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 CH53_3543 62aff784de262b7dd7e3e6a1dde68d84 214 Gene3D G3DSA:1.20.5.590 6 34 5.7E-11 T 18-10-2018 CH53_3543 62aff784de262b7dd7e3e6a1dde68d84 214 Gene3D G3DSA:1.10.287.500 35 168 3.1E-51 T 18-10-2018 CH53_31 368d1ca6067fdf25af419903cadcaeb0 144 Pfam PF07681 DoxX 20 98 7.4E-17 T 18-10-2018 IPR032808 DoxX family CH53_2906 3c587dd89242c31ae5773d56c2c4a940 418 Pfam PF01943 Polysaccharide biosynthesis protein 5 271 1.1E-45 T 18-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CH53_2069 23f991b46f48dd7edc36b531891d098a 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 1.5E-12 T 18-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CH53_2069 23f991b46f48dd7edc36b531891d098a 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 1.5E-12 T 18-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CH53_2069 23f991b46f48dd7edc36b531891d098a 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 1.5E-12 T 18-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CH53_2069 23f991b46f48dd7edc36b531891d098a 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 1.5E-12 T 18-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CH53_2069 23f991b46f48dd7edc36b531891d098a 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 1.5E-12 T 18-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CH53_2069 23f991b46f48dd7edc36b531891d098a 233 Gene3D G3DSA:3.40.50.80 99 233 3.3E-28 T 18-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH53_2069 23f991b46f48dd7edc36b531891d098a 233 SUPERFAMILY SSF63380 3 97 3.05E-20 T 18-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CH53_2069 23f991b46f48dd7edc36b531891d098a 233 Gene3D G3DSA:2.40.30.10 2 98 3.7E-23 T 18-10-2018 CH53_2069 23f991b46f48dd7edc36b531891d098a 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 96 8.8E-5 T 18-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CH53_2069 23f991b46f48dd7edc36b531891d098a 233 SUPERFAMILY SSF52343 100 231 1.05E-33 T 18-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CH53_2069 23f991b46f48dd7edc36b531891d098a 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 5.2E-22 T 18-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CH53_3282 77b3f5e176ffd7e281f65f5e53b5f0f7 543 Pfam PF00361 Proton-conducting membrane transporter 132 426 8.1E-57 T 18-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3282 77b3f5e176ffd7e281f65f5e53b5f0f7 543 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 9.5E-10 T 18-10-2018 CH53_3282 77b3f5e176ffd7e281f65f5e53b5f0f7 543 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 9.5E-10 T 18-10-2018 CH53_3282 77b3f5e176ffd7e281f65f5e53b5f0f7 543 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 321 333 9.5E-10 T 18-10-2018 CH53_3282 77b3f5e176ffd7e281f65f5e53b5f0f7 543 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 70 102 5.2E-7 T 18-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_4245 ba5cfd11a92567c35b649fa3f93f73bd 227 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 17 215 1.3E-37 T 18-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CH53_4245 ba5cfd11a92567c35b649fa3f93f73bd 227 Pfam PF01914 MarC family integral membrane protein 9 219 1.2E-64 T 18-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CH53_1607 8a508b15ea9c0e1f881c84b75881173a 148 Pfam PF00582 Universal stress protein family 3 138 2.9E-20 T 18-10-2018 IPR006016 UspA CH53_1607 8a508b15ea9c0e1f881c84b75881173a 148 Gene3D G3DSA:3.40.50.620 2 142 1.4E-50 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_1607 8a508b15ea9c0e1f881c84b75881173a 148 PIRSF PIRSF006276 1 141 7.8E-54 T 18-10-2018 IPR006015 Universal stress protein A CH53_1607 8a508b15ea9c0e1f881c84b75881173a 148 SUPERFAMILY SSF52402 3 139 4.6E-31 T 18-10-2018 CH53_2101 f4c49628a53070905adc66af85a5c54d 226 Pfam PF02581 Thiamine monophosphate synthase 30 198 1.3E-56 T 18-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CH53_2101 f4c49628a53070905adc66af85a5c54d 226 SUPERFAMILY SSF51391 10 216 3.53E-64 T 18-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CH53_2101 f4c49628a53070905adc66af85a5c54d 226 Gene3D G3DSA:3.20.20.70 12 219 3.6E-61 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2101 f4c49628a53070905adc66af85a5c54d 226 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 31 211 1.1E-56 T 18-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CH53_2101 f4c49628a53070905adc66af85a5c54d 226 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 3 216 20.15 T 18-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CH53_47 a68563b2264fe4fd2bbea1bcfb18ef86 524 Gene3D G3DSA:1.20.1740.10 16 464 5.8E-32 T 18-10-2018 CH53_47 a68563b2264fe4fd2bbea1bcfb18ef86 524 Pfam PF13520 Amino acid permease 22 456 2.4E-61 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_47 a68563b2264fe4fd2bbea1bcfb18ef86 524 PIRSF PIRSF006060 12 491 4.0E-52 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_47 a68563b2264fe4fd2bbea1bcfb18ef86 524 TIGRFAM TIGR03813 put_Glu_GABA_T: putative glutamate/gamma-aminobutyrate antiporter 16 489 6.4E-270 T 18-10-2018 IPR022520 Putative glutamate/gamma-aminobutyrate antiporter CH53_3746 3d133bc23b8e72657e13d1798af77803 346 Pfam PF02653 Branched-chain amino acid transport system / permease component 65 334 5.4E-47 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_3537 a5925f2a5ee3e89f4a85e306b4abd688 165 Gene3D G3DSA:2.40.50.180 37 146 1.5E-39 T 18-10-2018 CH53_3537 a5925f2a5ee3e89f4a85e306b4abd688 165 Pfam PF01584 CheW-like domain 18 154 3.4E-37 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CH53_3537 a5925f2a5ee3e89f4a85e306b4abd688 165 SUPERFAMILY SSF50341 17 158 2.49E-39 T 18-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CH53_3537 a5925f2a5ee3e89f4a85e306b4abd688 165 SMART SM00260 14 151 4.5E-44 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CH53_3537 a5925f2a5ee3e89f4a85e306b4abd688 165 Gene3D G3DSA:2.30.30.40 20 145 1.5E-39 T 18-10-2018 CH53_843 cf29aa3109e95ac4f8583640f63a01d4 592 TIGRFAM TIGR01089 fucI: L-fucose isomerase 6 591 0.0 T 18-10-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 CH53_843 cf29aa3109e95ac4f8583640f63a01d4 592 Pfam PF07882 L-fucose isomerase, second N-terminal domain 176 355 8.6E-82 T 18-10-2018 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 CH53_843 cf29aa3109e95ac4f8583640f63a01d4 592 Hamap MF_01254 L-fucose isomerase [fucI]. 4 592 70.389 T 18-10-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 CH53_843 cf29aa3109e95ac4f8583640f63a01d4 592 SUPERFAMILY SSF50443 357 591 9.94E-129 T 18-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal CH53_843 cf29aa3109e95ac4f8583640f63a01d4 592 Gene3D G3DSA:3.20.14.10 342 592 1.1E-135 T 18-10-2018 IPR038393 L-fucose isomerase, domain 3 superfamily KEGG: 00051+5.3.1.25 CH53_843 cf29aa3109e95ac4f8583640f63a01d4 592 Pfam PF07881 L-fucose isomerase, first N-terminal domain 8 175 3.1E-82 T 18-10-2018 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 CH53_843 cf29aa3109e95ac4f8583640f63a01d4 592 SUPERFAMILY SSF53743 5 356 8.76E-148 T 18-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 CH53_843 cf29aa3109e95ac4f8583640f63a01d4 592 Gene3D G3DSA:3.40.275.10 177 341 3.0E-79 T 18-10-2018 IPR038392 L-fucose isomerase, domain 2 superfamily KEGG: 00051+5.3.1.25 CH53_843 cf29aa3109e95ac4f8583640f63a01d4 592 Gene3D G3DSA:3.40.50.1070 1 176 8.1E-92 T 18-10-2018 IPR038391 L-fucose isomerase, domain 1 superfamily KEGG: 00051+5.3.1.25 CH53_843 cf29aa3109e95ac4f8583640f63a01d4 592 Pfam PF02952 L-fucose isomerase, C-terminal domain 391 555 1.2E-55 T 18-10-2018 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 CH53_3804 1e084a98dd90593b15f5a67b6c1dc336 261 Gene3D G3DSA:1.10.3470.10 30 261 9.6E-10 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_3804 1e084a98dd90593b15f5a67b6c1dc336 261 SUPERFAMILY SSF81345 3 255 7.72E-41 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_3804 1e084a98dd90593b15f5a67b6c1dc336 261 Pfam PF00950 ABC 3 transport family 1 255 2.7E-84 T 18-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CH53_2213 b8a95490d1400c240968836f16264a57 157 Gene3D G3DSA:3.10.450.30 43 157 1.0E-43 T 18-10-2018 CH53_2213 b8a95490d1400c240968836f16264a57 157 SUPERFAMILY SSF53933 51 156 3.12E-38 T 18-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 CH53_2213 b8a95490d1400c240968836f16264a57 157 Pfam PF00545 ribonuclease 67 154 3.3E-24 T 18-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 CH53_2213 b8a95490d1400c240968836f16264a57 157 PRINTS PR00117 Barnase signature 137 155 2.4E-29 T 18-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 CH53_2213 b8a95490d1400c240968836f16264a57 157 PRINTS PR00117 Barnase signature 54 71 2.4E-29 T 18-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 CH53_2213 b8a95490d1400c240968836f16264a57 157 PRINTS PR00117 Barnase signature 115 134 2.4E-29 T 18-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 CH53_2213 b8a95490d1400c240968836f16264a57 157 PRINTS PR00117 Barnase signature 74 91 2.4E-29 T 18-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 CH53_2213 b8a95490d1400c240968836f16264a57 157 PRINTS PR00117 Barnase signature 94 112 2.4E-29 T 18-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 CH53_2213 b8a95490d1400c240968836f16264a57 157 PIRSF PIRSF001013 1 157 9.2E-65 T 18-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 276 376 4.3E-24 T 18-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 Gene3D G3DSA:2.40.37.10 22 416 1.4E-143 T 18-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 18-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 41 275 5.8E-59 T 18-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 SUPERFAMILY SSF51419 25 277 9.68E-57 T 18-10-2018 IPR029066 PLP-binding barrel CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 8.0E-20 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 8.0E-20 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 8.0E-20 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 8.0E-20 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 8.0E-20 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 Gene3D G3DSA:3.20.20.10 33 279 1.4E-143 T 18-10-2018 IPR029066 PLP-binding barrel CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 8 418 5.9E-128 T 18-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 38.217 T 18-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 214 229 - T 18-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 4.7E-26 T 18-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 4.7E-26 T 18-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 4.7E-26 T 18-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 4.7E-26 T 18-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CH53_2674 86d36bb8f85e141fcc0a99f717d71bc6 420 SUPERFAMILY SSF50621 251 419 5.23E-57 T 18-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CH53_4412 5d59ca3f098e468b63a7afb3900cf9cb 415 Pfam PF02687 FtsX-like permease family 302 408 5.0E-12 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CH53_4412 5d59ca3f098e468b63a7afb3900cf9cb 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 414 3.3E-159 T 18-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CH53_4412 5d59ca3f098e468b63a7afb3900cf9cb 415 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 6 415 1.7E-212 T 18-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 CH53_4412 5d59ca3f098e468b63a7afb3900cf9cb 415 Pfam PF12704 MacB-like periplasmic core domain 28 239 2.0E-15 T 18-10-2018 IPR025857 MacB-like periplasmic core domain CH53_3039 6a188366b9a6ed1a983decedebf3a82f 510 Gene3D G3DSA:3.40.50.300 260 506 5.4E-45 T 18-10-2018 CH53_3039 6a188366b9a6ed1a983decedebf3a82f 510 SMART SM00382 30 212 2.3E-6 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3039 6a188366b9a6ed1a983decedebf3a82f 510 SMART SM00382 288 491 0.11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3039 6a188366b9a6ed1a983decedebf3a82f 510 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3039 6a188366b9a6ed1a983decedebf3a82f 510 Pfam PF00005 ABC transporter 280 437 9.1E-21 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3039 6a188366b9a6ed1a983decedebf3a82f 510 Pfam PF00005 ABC transporter 21 174 1.3E-28 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3039 6a188366b9a6ed1a983decedebf3a82f 510 Gene3D G3DSA:3.40.50.300 2 243 1.6E-54 T 18-10-2018 CH53_3039 6a188366b9a6ed1a983decedebf3a82f 510 SUPERFAMILY SSF52540 258 503 6.86E-47 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3039 6a188366b9a6ed1a983decedebf3a82f 510 SUPERFAMILY SSF52540 4 235 5.65E-57 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_653 73b2a0a6edce517a321d217e8f7fa508 427 Gene3D G3DSA:1.10.1790.10 232 332 1.6E-15 T 18-10-2018 CH53_653 73b2a0a6edce517a321d217e8f7fa508 427 SUPERFAMILY SSF63520 232 334 6.28E-21 T 18-10-2018 IPR036634 PRD domain superfamily GO:0006355 CH53_653 73b2a0a6edce517a321d217e8f7fa508 427 Pfam PF00874 PRD domain 241 329 3.7E-19 T 18-10-2018 IPR011608 PRD domain GO:0006355 CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 SUPERFAMILY SSF52540 6 219 2.06E-60 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 2.2E-17 T 18-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 SUPERFAMILY SSF50447 205 301 4.71E-31 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 18-10-2018 IPR031157 Tr-type G domain, conserved site CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 Gene3D G3DSA:2.40.30.10 338 393 1.7E-29 T 18-10-2018 CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 2.6E-14 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 SUPERFAMILY SSF50465 298 393 9.78E-36 T 18-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.727 T 18-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 3.0E-59 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 Gene3D G3DSA:3.40.50.300 1 203 1.5E-70 T 18-10-2018 CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 Gene3D G3DSA:2.40.30.10 206 334 7.5E-53 T 18-10-2018 CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.6E-236 T 18-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CH53_1492 94717fb166b64b01da5f013c8f37eb57 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 3.1E-33 T 18-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CH53_2262 997c8fed1bb0fa42f446f2a04cc61746 375 SUPERFAMILY SSF52540 66 209 3.61E-14 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2262 997c8fed1bb0fa42f446f2a04cc61746 375 Gene3D G3DSA:3.40.50.300 22 202 2.2E-19 T 18-10-2018 CH53_2262 997c8fed1bb0fa42f446f2a04cc61746 375 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 375 53.347 T 18-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 CH53_2262 997c8fed1bb0fa42f446f2a04cc61746 375 Pfam PF03969 AFG1-like ATPase 4 370 1.3E-147 T 18-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 CH53_1133 7386f746d0c6618a9be332708ab4a62d 94 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 17 71 3.0E-20 T 18-10-2018 IPR009885 Protein of unknown function DUF1435 CH53_1133 7386f746d0c6618a9be332708ab4a62d 94 Pfam PF07256 Protein of unknown function (DUF1435) 18 90 5.1E-31 T 18-10-2018 IPR009885 Protein of unknown function DUF1435 CH53_999 a491220b99a92019168e786fc512a704 185 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 30 167 2.6E-26 T 18-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CH53_999 a491220b99a92019168e786fc512a704 185 SMART SM00644 16 166 3.5E-55 T 18-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CH53_999 a491220b99a92019168e786fc512a704 185 SUPERFAMILY SSF55846 2 180 3.93E-68 T 18-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CH53_999 a491220b99a92019168e786fc512a704 185 Gene3D G3DSA:3.40.80.10 2 181 5.7E-59 T 18-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CH53_2629 5ec39505078a69bf091f5da702210aba 142 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 130 2.1E-54 T 18-10-2018 IPR009883 Inner membrane protein YgfX CH53_2629 5ec39505078a69bf091f5da702210aba 142 PIRSF PIRSF020653 1 139 1.5E-66 T 18-10-2018 IPR009883 Inner membrane protein YgfX CH53_2629 5ec39505078a69bf091f5da702210aba 142 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 19 130 4.0E-43 T 18-10-2018 IPR009883 Inner membrane protein YgfX CH53_3228 4c450fc4ae44ac54df1cc65740f1e684 312 SUPERFAMILY SSF54631 269 307 2.62E-5 T 18-10-2018 CH53_3228 4c450fc4ae44ac54df1cc65740f1e684 312 Gene3D G3DSA:3.40.50.300 1 242 1.8E-76 T 18-10-2018 CH53_3228 4c450fc4ae44ac54df1cc65740f1e684 312 SMART SM00382 26 213 9.8E-16 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3228 4c450fc4ae44ac54df1cc65740f1e684 312 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3228 4c450fc4ae44ac54df1cc65740f1e684 312 Pfam PF00005 ABC transporter 17 163 1.3E-32 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3228 4c450fc4ae44ac54df1cc65740f1e684 312 SUPERFAMILY SSF52540 1 240 3.4E-77 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4118 81897b3a2cf72e862ee099a6bbb5473e 1018 SUPERFAMILY SSF56176 17 282 1.68E-53 T 18-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CH53_4118 81897b3a2cf72e862ee099a6bbb5473e 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 674 685 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_4118 81897b3a2cf72e862ee099a6bbb5473e 1018 Pfam PF01565 FAD binding domain 52 192 2.7E-37 T 18-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CH53_4118 81897b3a2cf72e862ee099a6bbb5473e 1018 SUPERFAMILY SSF55103 258 542 1.96E-51 T 18-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CH53_4118 81897b3a2cf72e862ee099a6bbb5473e 1018 Gene3D G3DSA:3.30.465.40 28 209 4.2E-46 T 18-10-2018 CH53_4118 81897b3a2cf72e862ee099a6bbb5473e 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 9.7E-63 T 18-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CH53_4118 81897b3a2cf72e862ee099a6bbb5473e 1018 Pfam PF13183 4Fe-4S dicluster domain 577 688 1.6E-12 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_4118 81897b3a2cf72e862ee099a6bbb5473e 1018 SUPERFAMILY SSF46548 516 691 6.28E-9 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CH53_2942 cdcff54f9a085c854bba4efd91acc87c 164 Pfam PF16747 Surface-adhesin protein E 28 143 1.6E-15 T 18-10-2018 IPR031939 Surface-adhesin protein E-like CH53_2942 cdcff54f9a085c854bba4efd91acc87c 164 Gene3D G3DSA:3.10.129.80 22 147 1.3E-5 T 18-10-2018 CH53_13 5bff47e615b72a200c57cf7b54380e6a 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 18-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_13 5bff47e615b72a200c57cf7b54380e6a 320 Gene3D G3DSA:3.30.2350.10 92 317 4.1E-84 T 18-10-2018 CH53_13 5bff47e615b72a200c57cf7b54380e6a 320 SUPERFAMILY SSF55174 19 70 2.94E-8 T 18-10-2018 CH53_13 5bff47e615b72a200c57cf7b54380e6a 320 SUPERFAMILY SSF55120 95 312 1.92E-63 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_13 5bff47e615b72a200c57cf7b54380e6a 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 313 1.8E-92 T 18-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_13 5bff47e615b72a200c57cf7b54380e6a 320 Pfam PF00849 RNA pseudouridylate synthase 102 249 1.6E-30 T 18-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_13 5bff47e615b72a200c57cf7b54380e6a 320 SMART SM00363 20 79 1.1E-7 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_13 5bff47e615b72a200c57cf7b54380e6a 320 Gene3D G3DSA:3.10.290.10 9 86 5.0E-16 T 18-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CH53_13 5bff47e615b72a200c57cf7b54380e6a 320 Pfam PF01479 S4 domain 20 66 4.5E-9 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_4382 c3edbe50b06dcfe78b58c504397dfe29 128 ProDom PD498860 RC0070 96 128 0.007 T 18-10-2018 CH53_4382 c3edbe50b06dcfe78b58c504397dfe29 128 Gene3D G3DSA:1.20.1270.180 16 126 1.1E-25 T 18-10-2018 CH53_4382 c3edbe50b06dcfe78b58c504397dfe29 128 Pfam PF07007 Lysozyme inhibitor LprI 24 113 2.0E-23 T 18-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal CH53_4138 348dc3a589671d9c46056a091123cee6 335 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 7 333 32.84 T 18-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 CH53_4138 348dc3a589671d9c46056a091123cee6 335 SUPERFAMILY SSF81345 13 330 9.42E-80 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_4138 348dc3a589671d9c46056a091123cee6 335 Gene3D G3DSA:1.10.3470.10 8 332 7.4E-107 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_4138 348dc3a589671d9c46056a091123cee6 335 Pfam PF01032 FecCD transport family 29 330 4.3E-82 T 18-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CH53_176 0e751395933fcaf2bc6c5a87593d8d91 106 Gene3D G3DSA:3.30.1390.10 1 106 4.7E-48 T 18-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CH53_176 0e751395933fcaf2bc6c5a87593d8d91 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 16 101 28.459 T 18-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CH53_176 0e751395933fcaf2bc6c5a87593d8d91 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 6.8E-34 T 18-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 CH53_176 0e751395933fcaf2bc6c5a87593d8d91 106 SUPERFAMILY SSF54736 21 105 4.24E-33 T 18-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CH53_2044 cdf43a4cebef0a5768e922f756d98d7d 439 Gene3D G3DSA:3.40.190.10 147 425 2.6E-163 T 18-10-2018 CH53_2044 cdf43a4cebef0a5768e922f756d98d7d 439 Gene3D G3DSA:3.40.190.10 31 385 2.6E-163 T 18-10-2018 CH53_2044 cdf43a4cebef0a5768e922f756d98d7d 439 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 142 159 - T 18-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 CH53_2044 cdf43a4cebef0a5768e922f756d98d7d 439 SUPERFAMILY SSF53850 27 427 5.18E-73 T 18-10-2018 CH53_2044 cdf43a4cebef0a5768e922f756d98d7d 439 Pfam PF13416 Bacterial extracellular solute-binding protein 46 369 1.0E-41 T 18-10-2018 IPR006059 Bacterial extracellular solute-binding protein CH53_2751 fb8213541adebbee2c053e80c96f79ef 343 Gene3D G3DSA:3.30.70.260 233 343 1.1E-37 T 18-10-2018 CH53_2751 fb8213541adebbee2c053e80c96f79ef 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 3.6E-198 T 18-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 CH53_2751 fb8213541adebbee2c053e80c96f79ef 343 SMART SM00930 265 340 1.3E-24 T 18-10-2018 IPR018449 NIL domain CH53_2751 fb8213541adebbee2c053e80c96f79ef 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2751 fb8213541adebbee2c053e80c96f79ef 343 Pfam PF09383 NIL domain 268 339 1.9E-18 T 18-10-2018 IPR018449 NIL domain CH53_2751 fb8213541adebbee2c053e80c96f79ef 343 Gene3D G3DSA:3.40.50.300 1 232 3.0E-78 T 18-10-2018 CH53_2751 fb8213541adebbee2c053e80c96f79ef 343 SUPERFAMILY SSF52540 1 240 2.35E-84 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2751 fb8213541adebbee2c053e80c96f79ef 343 SMART SM00382 30 217 1.3E-15 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2751 fb8213541adebbee2c053e80c96f79ef 343 SUPERFAMILY SSF55021 248 343 1.01E-24 T 18-10-2018 CH53_2751 fb8213541adebbee2c053e80c96f79ef 343 Pfam PF00005 ABC transporter 21 169 2.7E-35 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3337 94b2f52b19567d1f916910756d39399d 363 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 349 5.1E-44 T 18-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CH53_3337 94b2f52b19567d1f916910756d39399d 363 Gene3D G3DSA:1.20.1090.10 162 363 2.2E-56 T 18-10-2018 CH53_3337 94b2f52b19567d1f916910756d39399d 363 Gene3D G3DSA:3.40.50.1970 7 160 7.1E-24 T 18-10-2018 CH53_3337 94b2f52b19567d1f916910756d39399d 363 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 18-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CH53_3337 94b2f52b19567d1f916910756d39399d 363 PIRSF PIRSF000112 2 362 2.3E-112 T 18-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 CH53_3337 94b2f52b19567d1f916910756d39399d 363 SUPERFAMILY SSF56796 10 357 6.28E-58 T 18-10-2018 CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 Pfam PF03797 Autotransporter beta-domain 810 1052 1.2E-39 T 18-10-2018 IPR005546 Autotransporter beta-domain CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 Gene3D G3DSA:2.160.20.20 29 327 8.9E-10 T 18-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 639 1075 4.6E-96 T 18-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 SMART SM00869 806 1063 1.2E-31 T 18-10-2018 IPR005546 Autotransporter beta-domain CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 SMART SM00710 415 437 2900.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 SMART SM00710 908 935 7500.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 SMART SM00710 92 114 9400.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 SMART SM00710 367 391 5100.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 SMART SM00710 465 489 2700.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 SMART SM00710 198 218 2600.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 SMART SM00710 167 191 390.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 SMART SM00710 220 243 8300.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 SUPERFAMILY SSF103515 770 1075 3.79E-41 T 18-10-2018 IPR036709 Autotransporter beta-domain superfamily CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 Gene3D G3DSA:2.160.20.20 328 744 1.2E-61 T 18-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 SUPERFAMILY SSF51126 160 742 8.79E-35 T 18-10-2018 IPR011050 Pectin lyase fold/virulence factor CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 Pfam PF03212 Pertactin 639 741 1.1E-11 T 18-10-2018 IPR004899 Pertactin, central region CH53_2321 248f64396f81c8aa2e899309ef2daf93 1075 Gene3D G3DSA:2.40.128.130 765 1075 5.7E-66 T 18-10-2018 IPR036709 Autotransporter beta-domain superfamily CH53_340 7fb723afd140e844646b77b59ad422fa 242 SUPERFAMILY SSF53335 9 238 3.54E-44 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_340 7fb723afd140e844646b77b59ad422fa 242 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 16 240 37.533 T 18-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CH53_340 7fb723afd140e844646b77b59ad422fa 242 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 1.5E-88 T 18-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CH53_340 7fb723afd140e844646b77b59ad422fa 242 Pfam PF13489 Methyltransferase domain 58 196 9.3E-25 T 18-10-2018 CH53_340 7fb723afd140e844646b77b59ad422fa 242 Gene3D G3DSA:3.40.50.150 16 240 7.8E-75 T 18-10-2018 CH53_2705 e0c60cdd0c2e10a617846869038d1dfc 73 SUPERFAMILY SSF50182 21 71 1.31E-19 T 18-10-2018 IPR010920 LSM domain superfamily CH53_2705 e0c60cdd0c2e10a617846869038d1dfc 73 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 1.5E-25 T 18-10-2018 IPR010305 Protein of unknown function DUF903 CH53_2705 e0c60cdd0c2e10a617846869038d1dfc 73 Gene3D G3DSA:2.30.30.100 19 72 4.8E-28 T 18-10-2018 CH53_146 f6835398e10456b8bfce80aea95167a4 69 SUPERFAMILY SSF50249 3 67 3.43E-17 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_146 f6835398e10456b8bfce80aea95167a4 69 PIRSF PIRSF002599 1 69 1.3E-17 T 18-10-2018 IPR012156 Cold shock, CspA GO:0003676 CH53_146 f6835398e10456b8bfce80aea95167a4 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 1.7E-19 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_146 f6835398e10456b8bfce80aea95167a4 69 PRINTS PR00050 Cold shock protein signature 42 60 3.2E-11 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_146 f6835398e10456b8bfce80aea95167a4 69 PRINTS PR00050 Cold shock protein signature 6 21 3.2E-11 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_146 f6835398e10456b8bfce80aea95167a4 69 PRINTS PR00050 Cold shock protein signature 27 36 3.2E-11 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_146 f6835398e10456b8bfce80aea95167a4 69 SMART SM00357 5 69 6.5E-12 T 18-10-2018 IPR011129 Cold shock domain GO:0003676 CH53_146 f6835398e10456b8bfce80aea95167a4 69 Gene3D G3DSA:2.40.50.140 5 68 2.1E-20 T 18-10-2018 CH53_220 0023aca51a880330c8dfed774c6ed21b 328 SUPERFAMILY SSF55021 251 328 2.63E-11 T 18-10-2018 CH53_220 0023aca51a880330c8dfed774c6ed21b 328 Pfam PF09383 NIL domain 254 326 5.4E-13 T 18-10-2018 IPR018449 NIL domain CH53_220 0023aca51a880330c8dfed774c6ed21b 328 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_220 0023aca51a880330c8dfed774c6ed21b 328 SUPERFAMILY SSF52540 1 235 3.55E-78 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_220 0023aca51a880330c8dfed774c6ed21b 328 Pfam PF00005 ABC transporter 21 169 1.7E-34 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_220 0023aca51a880330c8dfed774c6ed21b 328 SMART SM00382 30 226 7.6E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_220 0023aca51a880330c8dfed774c6ed21b 328 SMART SM00930 251 328 1.4E-14 T 18-10-2018 IPR018449 NIL domain CH53_220 0023aca51a880330c8dfed774c6ed21b 328 Gene3D G3DSA:3.40.50.300 1 238 1.3E-72 T 18-10-2018 CH53_220 0023aca51a880330c8dfed774c6ed21b 328 Gene3D G3DSA:3.30.70.260 239 328 4.8E-8 T 18-10-2018 CH53_3819 381543eb03d96402b5bab06a18484bf4 564 Gene3D G3DSA:3.40.50.12780 12 451 1.1E-117 T 18-10-2018 CH53_3819 381543eb03d96402b5bab06a18484bf4 564 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 18-10-2018 IPR020845 AMP-binding, conserved site CH53_3819 381543eb03d96402b5bab06a18484bf4 564 SUPERFAMILY SSF56801 17 552 4.71E-149 T 18-10-2018 CH53_3819 381543eb03d96402b5bab06a18484bf4 564 Pfam PF00501 AMP-binding enzyme 29 460 4.1E-109 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CH53_3819 381543eb03d96402b5bab06a18484bf4 564 Gene3D G3DSA:3.30.300.310 456 558 1.1E-30 T 18-10-2018 CH53_3819 381543eb03d96402b5bab06a18484bf4 564 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 1.4E-16 T 18-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CH53_2477 1955c1f192a94467fd39fb72b5b573be 469 Gene3D G3DSA:1.20.1740.10 10 466 7.2E-64 T 18-10-2018 CH53_2477 1955c1f192a94467fd39fb72b5b573be 469 Pfam PF00324 Amino acid permease 19 456 2.4E-118 T 18-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CH53_2477 1955c1f192a94467fd39fb72b5b573be 469 ProSitePatterns PS00218 Amino acid permeases signature. 44 75 - T 18-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CH53_2477 1955c1f192a94467fd39fb72b5b573be 469 PIRSF PIRSF006060 5 468 5.3E-82 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_1854 813dab9b5e92ea3f04cc7190bd299ca0 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 18-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CH53_1854 813dab9b5e92ea3f04cc7190bd299ca0 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.952 T 18-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 CH53_1854 813dab9b5e92ea3f04cc7190bd299ca0 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 61 2.1E-8 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_1854 813dab9b5e92ea3f04cc7190bd299ca0 198 SUPERFAMILY SSF48498 86 193 7.12E-6 T 18-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH53_1854 813dab9b5e92ea3f04cc7190bd299ca0 198 Gene3D G3DSA:1.10.357.10 9 198 1.2E-73 T 18-10-2018 CH53_1854 813dab9b5e92ea3f04cc7190bd299ca0 198 SUPERFAMILY SSF46689 8 75 8.98E-12 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_2272 495be247166d33515025bf7d9cbeee75 217 PIRSF PIRSF006320 1 216 6.0E-103 T 18-10-2018 IPR026041 Glyoxalase ElbB CH53_2272 495be247166d33515025bf7d9cbeee75 217 Gene3D G3DSA:3.40.50.880 1 217 1.4E-93 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_2272 495be247166d33515025bf7d9cbeee75 217 SUPERFAMILY SSF52317 1 215 6.42E-61 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_2222 69eb102b43400ecc3e7d03a681a19551 258 TIGRFAM TIGR03580 EF_0832: conserved hypothetical protein EF_0832/AHA_3913 2 258 3.4E-152 T 18-10-2018 IPR020042 Protein of unknown function DUF4311 CH53_2222 69eb102b43400ecc3e7d03a681a19551 258 Pfam PF14188 Domain of unknown function (DUF4311) 25 236 3.0E-122 T 18-10-2018 IPR020042 Protein of unknown function DUF4311 CH53_3502 e484c174c8cafd4ce864e8a28160c290 334 Pfam PF06616 BsuBI/PstI restriction endonuclease C-terminus 136 328 9.0E-25 T 18-10-2018 IPR009528 Restriction endonuclease, type II, BsuBI/PstI, C-terminal GO:0000287|GO:0003677|GO:0009036|GO:0009307 CH53_3502 e484c174c8cafd4ce864e8a28160c290 334 Gene3D G3DSA:3.40.1350.80 181 334 4.1E-31 T 18-10-2018 CH53_3798 eae0e14d24207f11794ba613ee5aa82d 150 SUPERFAMILY SSF55811 5 147 3.38E-24 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CH53_3798 eae0e14d24207f11794ba613ee5aa82d 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 129 142 2.8E-46 T 18-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CH53_3798 eae0e14d24207f11794ba613ee5aa82d 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 102 123 2.8E-46 T 18-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CH53_3798 eae0e14d24207f11794ba613ee5aa82d 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 6 23 2.8E-46 T 18-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CH53_3798 eae0e14d24207f11794ba613ee5aa82d 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 74 93 2.8E-46 T 18-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CH53_3798 eae0e14d24207f11794ba613ee5aa82d 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 23 44 2.8E-46 T 18-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CH53_3798 eae0e14d24207f11794ba613ee5aa82d 150 Pfam PF00293 NUDIX domain 11 135 2.5E-17 T 18-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CH53_3798 eae0e14d24207f11794ba613ee5aa82d 150 Gene3D G3DSA:3.90.79.10 1 150 8.4E-42 T 18-10-2018 CH53_3798 eae0e14d24207f11794ba613ee5aa82d 150 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 18-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CH53_1943 12ae5ce6b10f439fdb35df34c42f3d87 318 Gene3D G3DSA:3.40.50.2300 27 287 4.1E-109 T 18-10-2018 CH53_1943 12ae5ce6b10f439fdb35df34c42f3d87 318 Gene3D G3DSA:3.40.50.2300 128 269 4.1E-109 T 18-10-2018 CH53_1943 12ae5ce6b10f439fdb35df34c42f3d87 318 SUPERFAMILY SSF53822 23 310 3.37E-72 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_1943 12ae5ce6b10f439fdb35df34c42f3d87 318 Pfam PF13407 Periplasmic binding protein domain 28 275 2.4E-44 T 18-10-2018 IPR025997 Periplasmic binding protein CH53_492 f5db1ca1bc19cabb890df8b37503dc50 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.033 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_492 f5db1ca1bc19cabb890df8b37503dc50 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_492 f5db1ca1bc19cabb890df8b37503dc50 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 1.5E-27 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_492 f5db1ca1bc19cabb890df8b37503dc50 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 3 163 9.0E-77 T 18-10-2018 IPR014297 Dimethylsulphoxide reductase, chain B CH53_492 f5db1ca1bc19cabb890df8b37503dc50 205 SUPERFAMILY SSF54862 1 199 8.89E-62 T 18-10-2018 CH53_492 f5db1ca1bc19cabb890df8b37503dc50 205 Gene3D G3DSA:3.30.70.20 1 191 3.2E-49 T 18-10-2018 CH53_4069 761c28fcf3fb1d6d1d5879b93f0b83c3 330 SUPERFAMILY SSF52540 3 266 7.78E-51 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4069 761c28fcf3fb1d6d1d5879b93f0b83c3 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 5.3E-20 T 18-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CH53_4069 761c28fcf3fb1d6d1d5879b93f0b83c3 330 Pfam PF00005 ABC transporter 24 187 9.3E-28 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_4069 761c28fcf3fb1d6d1d5879b93f0b83c3 330 SMART SM00382 32 235 1.5E-6 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_4069 761c28fcf3fb1d6d1d5879b93f0b83c3 330 Gene3D G3DSA:3.40.50.300 2 329 6.6E-76 T 18-10-2018 CH53_4069 761c28fcf3fb1d6d1d5879b93f0b83c3 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 6.6E-16 T 18-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CH53_2508 a61c85073f3cd0effe0bd1507c9e27c4 244 Gene3D G3DSA:2.60.120.10 114 244 1.2E-47 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_2508 a61c85073f3cd0effe0bd1507c9e27c4 244 SUPERFAMILY SSF51182 120 241 2.97E-27 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_2508 a61c85073f3cd0effe0bd1507c9e27c4 244 Pfam PF06249 Ethanolamine utilisation protein EutQ 92 243 3.1E-56 T 18-10-2018 IPR010424 Ethanolamine utilisation EutQ CH53_1922 fcc691fdef91ec1b4265a9f56b0f7d40 446 Gene3D G3DSA:1.10.287.470 103 173 1.2E-8 T 18-10-2018 CH53_1922 fcc691fdef91ec1b4265a9f56b0f7d40 446 SUPERFAMILY SSF111369 67 165 1.83E-5 T 18-10-2018 CH53_1922 fcc691fdef91ec1b4265a9f56b0f7d40 446 Gene3D G3DSA:2.40.50.100 69 102 1.2E-8 T 18-10-2018 CH53_1922 fcc691fdef91ec1b4265a9f56b0f7d40 446 Gene3D G3DSA:2.40.50.100 302 338 1.6E-18 T 18-10-2018 CH53_1922 fcc691fdef91ec1b4265a9f56b0f7d40 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 8.9E-49 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_1922 fcc691fdef91ec1b4265a9f56b0f7d40 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 425 445 8.9E-49 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_1922 fcc691fdef91ec1b4265a9f56b0f7d40 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 8.9E-49 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_1922 fcc691fdef91ec1b4265a9f56b0f7d40 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 39 62 8.9E-49 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_1922 fcc691fdef91ec1b4265a9f56b0f7d40 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 410 425 8.9E-49 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_1922 fcc691fdef91ec1b4265a9f56b0f7d40 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 8.9E-49 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CH53_1922 fcc691fdef91ec1b4265a9f56b0f7d40 446 Pfam PF00529 HlyD membrane-fusion protein of T1SS 41 403 2.4E-13 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CH53_1922 fcc691fdef91ec1b4265a9f56b0f7d40 446 Gene3D G3DSA:1.10.287.470 222 301 1.6E-18 T 18-10-2018 CH53_1922 fcc691fdef91ec1b4265a9f56b0f7d40 446 Gene3D G3DSA:2.40.30.170 339 423 1.6E-18 T 18-10-2018 CH53_1922 fcc691fdef91ec1b4265a9f56b0f7d40 446 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 34 446 1.8E-109 T 18-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 CH53_1922 fcc691fdef91ec1b4265a9f56b0f7d40 446 SUPERFAMILY SSF111369 262 423 6.93E-8 T 18-10-2018 CH53_1922 fcc691fdef91ec1b4265a9f56b0f7d40 446 ProSitePatterns PS00543 HlyD family secretion proteins signature. 410 432 - T 18-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 CH53_1779 e7f11e9db36dcc64faa91a26c2a02f9e 146 Gene3D G3DSA:3.40.50.360 1 146 4.8E-51 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_1779 e7f11e9db36dcc64faa91a26c2a02f9e 146 SUPERFAMILY SSF52218 1 146 6.58E-42 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_1779 e7f11e9db36dcc64faa91a26c2a02f9e 146 Pfam PF00258 Flavodoxin 7 135 1.3E-27 T 18-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CH53_1779 e7f11e9db36dcc64faa91a26c2a02f9e 146 PRINTS PR00369 Flavodoxin signature 106 125 2.1E-8 T 18-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CH53_1779 e7f11e9db36dcc64faa91a26c2a02f9e 146 PRINTS PR00369 Flavodoxin signature 51 62 2.1E-8 T 18-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CH53_1779 e7f11e9db36dcc64faa91a26c2a02f9e 146 PRINTS PR00369 Flavodoxin signature 5 18 2.1E-8 T 18-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CH53_1779 e7f11e9db36dcc64faa91a26c2a02f9e 146 PRINTS PR00369 Flavodoxin signature 82 92 2.1E-8 T 18-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CH53_2011 7917a4119a3d58015dddbef9db994bb9 206 Pfam PF01810 LysE type translocator 14 202 3.0E-46 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CH53_2011 7917a4119a3d58015dddbef9db994bb9 206 PIRSF PIRSF006324 1 205 2.9E-55 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CH53_1954 be04e78c54433a9d470f97e09354063d 514 Gene3D G3DSA:3.40.50.1100 61 157 6.4E-129 T 18-10-2018 CH53_1954 be04e78c54433a9d470f97e09354063d 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 2.3E-28 T 18-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CH53_1954 be04e78c54433a9d470f97e09354063d 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 1.1E-26 T 18-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CH53_1954 be04e78c54433a9d470f97e09354063d 514 SUPERFAMILY SSF55021 336 423 1.03E-27 T 18-10-2018 CH53_1954 be04e78c54433a9d470f97e09354063d 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 1.8E-75 T 18-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CH53_1954 be04e78c54433a9d470f97e09354063d 514 SUPERFAMILY SSF55021 420 512 8.93E-27 T 18-10-2018 CH53_1954 be04e78c54433a9d470f97e09354063d 514 Gene3D G3DSA:3.40.1020.10 338 514 9.1E-74 T 18-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CH53_1954 be04e78c54433a9d470f97e09354063d 514 SUPERFAMILY SSF53686 14 365 6.42E-100 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH53_1954 be04e78c54433a9d470f97e09354063d 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 3.0E-262 T 18-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CH53_1954 be04e78c54433a9d470f97e09354063d 514 Gene3D G3DSA:3.40.50.1100 25 327 6.4E-129 T 18-10-2018 CH53_1954 be04e78c54433a9d470f97e09354063d 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 18-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CH53_1715 35ca7a24a4e4035fd12a0225cf41102c 302 Gene3D G3DSA:3.30.420.310 81 288 7.9E-89 T 18-10-2018 CH53_1715 35ca7a24a4e4035fd12a0225cf41102c 302 Gene3D G3DSA:3.30.420.300 5 110 7.9E-89 T 18-10-2018 CH53_1715 35ca7a24a4e4035fd12a0225cf41102c 302 Pfam PF05035 2-keto-3-deoxy-galactonokinase 9 296 2.6E-90 T 18-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 CH53_813 aabd0654c90bdfec0b739313e453946a 519 Gene3D G3DSA:3.30.590.20 17 516 1.1E-189 T 18-10-2018 CH53_813 aabd0654c90bdfec0b739313e453946a 519 SUPERFAMILY SSF55931 4 513 8.5E-203 T 18-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CH53_813 aabd0654c90bdfec0b739313e453946a 519 Pfam PF04262 Glutamate-cysteine ligase 10 380 1.3E-172 T 18-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CH53_813 aabd0654c90bdfec0b739313e453946a 519 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 513 1.7E-254 T 18-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CH53_813 aabd0654c90bdfec0b739313e453946a 519 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 519 227.366 T 18-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CH53_3706 18741fd39a847a461e44d38a3e28cd65 467 Pfam PF10080 Predicted membrane protein (DUF2318) 297 400 1.3E-28 T 18-10-2018 IPR018758 Domain of unknown function DUF2318, membrane CH53_3706 18741fd39a847a461e44d38a3e28cd65 467 Pfam PF04945 YHS domain 408 454 1.2E-15 T 18-10-2018 IPR007029 YHS domain CH53_1670 2ff3e6c2fbe9ce905da8e5e3caf84db6 185 Gene3D G3DSA:2.60.40.1090 28 185 2.4E-32 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_1670 2ff3e6c2fbe9ce905da8e5e3caf84db6 185 SUPERFAMILY SSF49401 32 185 4.57E-36 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_2163 d9c4fd2099693349cca9c84ab26061fc 442 Pfam PF13657 HipA N-terminal domain 8 108 1.1E-21 T 18-10-2018 IPR017508 HipA, N-terminal subdomain 1 CH53_2163 d9c4fd2099693349cca9c84ab26061fc 442 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 8 108 6.8E-28 T 18-10-2018 IPR017508 HipA, N-terminal subdomain 1 CH53_2163 d9c4fd2099693349cca9c84ab26061fc 442 Pfam PF07804 HipA-like C-terminal domain 155 406 1.4E-45 T 18-10-2018 IPR012893 HipA-like, C-terminal CH53_502 33540700234e4f0b50b204e4a1d67a68 246 SUPERFAMILY SSF52172 2 139 1.57E-27 T 18-10-2018 IPR011006 CheY-like superfamily CH53_502 33540700234e4f0b50b204e4a1d67a68 246 Gene3D G3DSA:2.40.50.40 138 206 1.5E-17 T 18-10-2018 CH53_502 33540700234e4f0b50b204e4a1d67a68 246 Gene3D G3DSA:3.40.50.2300 1 134 3.0E-29 T 18-10-2018 CH53_502 33540700234e4f0b50b204e4a1d67a68 246 SMART SM00850 147 245 4.1E-34 T 18-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CH53_502 33540700234e4f0b50b204e4a1d67a68 246 Pfam PF00072 Response regulator receiver domain 4 112 4.7E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_502 33540700234e4f0b50b204e4a1d67a68 246 SMART SM00448 1 112 4.5E-20 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_502 33540700234e4f0b50b204e4a1d67a68 246 Pfam PF04397 LytTr DNA-binding domain 148 244 6.3E-30 T 18-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CH53_564 c575fddfe1c1a422d4e8841fb0b5ccf4 136 SUPERFAMILY SSF52833 11 122 1.25E-30 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_564 c575fddfe1c1a422d4e8841fb0b5ccf4 136 Pfam PF03960 ArsC family 13 120 1.5E-13 T 18-10-2018 IPR006660 Arsenate reductase-like CH53_564 c575fddfe1c1a422d4e8841fb0b5ccf4 136 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 10 123 3.4E-39 T 18-10-2018 IPR006504 Transcriptional regulator Spx/MgsR CH53_564 c575fddfe1c1a422d4e8841fb0b5ccf4 136 Gene3D G3DSA:3.40.30.10 9 123 3.1E-40 T 18-10-2018 CH53_3930 9f004708c8bca6e292a0f5318f8a2e0c 233 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 209 1.0E-84 T 18-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 CH53_3930 9f004708c8bca6e292a0f5318f8a2e0c 233 PIRSF PIRSF006102 1 219 1.0E-77 T 18-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CH53_3930 9f004708c8bca6e292a0f5318f8a2e0c 233 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.221 T 18-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 CH53_3930 9f004708c8bca6e292a0f5318f8a2e0c 233 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 8.4E-64 T 18-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CH53_4386 da63b96e7486e04893e3d99ccfa5c710 94 Pfam PF03795 YCII-related domain 1 79 3.8E-10 T 18-10-2018 IPR005545 YCII-related CH53_4386 da63b96e7486e04893e3d99ccfa5c710 94 SUPERFAMILY SSF54909 1 80 8.76E-14 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_693 6ebee2513bdc106fd5035609f870a7e0 127 SUPERFAMILY SSF51998 27 125 3.07E-24 T 18-10-2018 CH53_693 6ebee2513bdc106fd5035609f870a7e0 127 Gene3D G3DSA:3.20.70.20 60 127 5.3E-25 T 18-10-2018 CH53_693 6ebee2513bdc106fd5035609f870a7e0 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 42.869 T 18-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CH53_693 6ebee2513bdc106fd5035609f870a7e0 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 1.3E-72 T 18-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CH53_693 6ebee2513bdc106fd5035609f870a7e0 127 PIRSF PIRSF000378 2 127 6.3E-55 T 18-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CH53_693 6ebee2513bdc106fd5035609f870a7e0 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 18-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CH53_693 6ebee2513bdc106fd5035609f870a7e0 127 Pfam PF01228 Glycine radical 14 108 1.1E-22 T 18-10-2018 IPR001150 Glycine radical domain GO:0003824 CH53_881 bc80b589b488963072c5a74b7d985e7e 346 Gene3D G3DSA:1.10.3720.10 98 340 2.0E-22 T 18-10-2018 IPR035906 MetI-like superfamily CH53_881 bc80b589b488963072c5a74b7d985e7e 346 SUPERFAMILY SSF161098 102 331 3.76E-16 T 18-10-2018 IPR035906 MetI-like superfamily CH53_881 bc80b589b488963072c5a74b7d985e7e 346 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 345 2.2E-41 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_4067 1a50bf39b385819a7d277d7cc3e0dae3 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 1.4E-43 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_4067 1a50bf39b385819a7d277d7cc3e0dae3 321 SUPERFAMILY SSF161098 69 300 7.46E-24 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1157 26cf322664b07f9099fdecb9382b9a98 388 SUPERFAMILY SSF53756 40 383 1.88E-76 T 18-10-2018 CH53_1157 26cf322664b07f9099fdecb9382b9a98 388 Gene3D G3DSA:3.40.50.2000 205 387 1.9E-39 T 18-10-2018 CH53_1157 26cf322664b07f9099fdecb9382b9a98 388 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 41 381 1.5E-115 T 18-10-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative CH53_1157 26cf322664b07f9099fdecb9382b9a98 388 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 114 354 2.5E-43 T 18-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 CH53_1157 26cf322664b07f9099fdecb9382b9a98 388 Gene3D G3DSA:3.40.50.2000 34 199 2.7E-35 T 18-10-2018 CH53_864 780efa37ac1717668aa6838151f57c85 212 PIRSF PIRSF036382 9 200 1.4E-36 T 18-10-2018 IPR008327 Signal transduction response regulator, antiterminator CH53_864 780efa37ac1717668aa6838151f57c85 212 Gene3D G3DSA:3.40.50.2300 10 131 1.6E-35 T 18-10-2018 CH53_864 780efa37ac1717668aa6838151f57c85 212 Pfam PF03861 ANTAR domain 141 193 1.9E-10 T 18-10-2018 IPR005561 ANTAR domain GO:0003723 CH53_864 780efa37ac1717668aa6838151f57c85 212 Gene3D G3DSA:1.10.10.10 141 198 2.9E-11 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_864 780efa37ac1717668aa6838151f57c85 212 SMART SM01012 138 193 1.2E-12 T 18-10-2018 IPR005561 ANTAR domain GO:0003723 CH53_864 780efa37ac1717668aa6838151f57c85 212 SUPERFAMILY SSF52172 17 193 1.33E-34 T 18-10-2018 IPR011006 CheY-like superfamily CH53_1923 4af5ae3c551fb0c6a956808bb9e4f324 262 SUPERFAMILY SSF74653 159 258 1.83E-20 T 18-10-2018 CH53_1923 4af5ae3c551fb0c6a956808bb9e4f324 262 Gene3D G3DSA:3.30.1150.10 110 260 1.8E-31 T 18-10-2018 CH53_1923 4af5ae3c551fb0c6a956808bb9e4f324 262 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 179 257 9.9E-18 T 18-10-2018 IPR037682 TonB, C-terminal GO:0055085 CH53_1923 4af5ae3c551fb0c6a956808bb9e4f324 262 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 179 258 6.2E-21 T 18-10-2018 IPR006260 TonB/TolA, C-terminal CH53_3639 0e300a154aea0c3038a8e5ffa3d7ae29 248 SMART SM00910 125 228 9.4E-8 T 18-10-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 CH53_3639 0e300a154aea0c3038a8e5ffa3d7ae29 248 Pfam PF08797 HIRAN domain 127 228 7.9E-11 T 18-10-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 CH53_3639 0e300a154aea0c3038a8e5ffa3d7ae29 248 Gene3D G3DSA:3.30.70.2330 124 227 3.0E-7 T 18-10-2018 CH53_2888 53a03aba7487ec2f23c6787c25c6fe8e 90 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 3.5E-16 T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2888 53a03aba7487ec2f23c6787c25c6fe8e 90 SUPERFAMILY SSF143800 1 80 9.02E-22 T 18-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_2888 53a03aba7487ec2f23c6787c25c6fe8e 90 Pfam PF01197 Ribosomal protein L31 1 78 9.2E-24 T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2888 53a03aba7487ec2f23c6787c25c6fe8e 90 Gene3D G3DSA:2.30.170.50 1 83 1.5E-21 T 18-10-2018 CH53_2888 53a03aba7487ec2f23c6787c25c6fe8e 90 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 26.033 T 18-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2888 53a03aba7487ec2f23c6787c25c6fe8e 90 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.1E-13 T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2888 53a03aba7487ec2f23c6787c25c6fe8e 90 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.1E-13 T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2888 53a03aba7487ec2f23c6787c25c6fe8e 90 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.1E-13 T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2963 b8e940ea4b7dafb8240f146c65c02fff 386 Pfam PF13936 Helix-turn-helix domain 62 102 9.5E-13 T 18-10-2018 IPR025246 Transposase IS30-like HTH domain CH53_2963 b8e940ea4b7dafb8240f146c65c02fff 386 Gene3D G3DSA:3.30.420.10 232 384 7.2E-11 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CH53_2963 b8e940ea4b7dafb8240f146c65c02fff 386 Pfam PF00665 Integrase core domain 236 339 8.9E-17 T 18-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CH53_2963 b8e940ea4b7dafb8240f146c65c02fff 386 SUPERFAMILY SSF53098 235 382 3.04E-29 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_2337 2554533a0569ab235d496acc4a8ace2c 416 PIRSF PIRSF006060 1 414 3.2E-48 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_2337 2554533a0569ab235d496acc4a8ace2c 416 Pfam PF13520 Amino acid permease 8 400 9.0E-29 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_2337 2554533a0569ab235d496acc4a8ace2c 416 Gene3D G3DSA:1.20.1740.10 4 414 1.2E-47 T 18-10-2018 CH53_2795 dacce2a7af0cda8c9914f6ca3bea8d87 312 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 32 301 7.0E-19 T 18-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CH53_2795 dacce2a7af0cda8c9914f6ca3bea8d87 312 SUPERFAMILY SSF51695 27 307 1.15E-45 T 18-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CH53_2795 dacce2a7af0cda8c9914f6ca3bea8d87 312 Gene3D G3DSA:3.20.20.190 11 312 2.3E-37 T 18-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CH53_4368 0c7f37b5893827d70622323e361b1bbc 99 Pfam PF10765 Protein of unknown function (DUF2591) 30 97 4.8E-13 T 18-10-2018 IPR019701 Bacteriophage P22, NinX CH53_105 2a02d1c4b1e3133e0cd38a69b01858a8 396 SMART SM00359 3 88 9.9E-11 T 18-10-2018 IPR002478 PUA domain GO:0003723 CH53_105 2a02d1c4b1e3133e0cd38a69b01858a8 396 Gene3D G3DSA:3.30.750.80 73 181 9.4E-38 T 18-10-2018 CH53_105 2a02d1c4b1e3133e0cd38a69b01858a8 396 SUPERFAMILY SSF88697 4 72 2.49E-15 T 18-10-2018 IPR015947 PUA-like superfamily CH53_105 2a02d1c4b1e3133e0cd38a69b01858a8 396 SUPERFAMILY SSF53335 79 392 4.95E-70 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_105 2a02d1c4b1e3133e0cd38a69b01858a8 396 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 396 68.065 T 18-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 CH53_105 2a02d1c4b1e3133e0cd38a69b01858a8 396 Gene3D G3DSA:2.30.130.10 1 72 6.8E-29 T 18-10-2018 IPR036974 PUA domain superfamily GO:0003723 CH53_105 2a02d1c4b1e3133e0cd38a69b01858a8 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 174 370 1.9E-27 T 18-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CH53_105 2a02d1c4b1e3133e0cd38a69b01858a8 396 Gene3D G3DSA:3.40.50.150 182 396 1.6E-69 T 18-10-2018 CH53_3813 8c8910faec7b70ec78ade2cf14efd6ca 125 SUPERFAMILY SSF103481 6 107 4.71E-17 T 18-10-2018 CH53_3813 8c8910faec7b70ec78ade2cf14efd6ca 125 Gene3D G3DSA:1.10.3730.20 1 109 2.4E-29 T 18-10-2018 CH53_3813 8c8910faec7b70ec78ade2cf14efd6ca 125 Pfam PF00893 Small Multidrug Resistance protein 3 93 8.9E-23 T 18-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CH53_3813 8c8910faec7b70ec78ade2cf14efd6ca 125 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 1 125 32.482 T 18-10-2018 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 CH53_3622 740bb5daa1701bac390deebed843c3dc 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 32.727 T 18-10-2018 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CH53_3622 740bb5daa1701bac390deebed843c3dc 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 18-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CH53_3622 740bb5daa1701bac390deebed843c3dc 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 3.4E-17 T 18-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CH53_3622 740bb5daa1701bac390deebed843c3dc 182 Gene3D G3DSA:1.20.120.1760 4 176 8.0E-14 T 18-10-2018 CH53_3622 740bb5daa1701bac390deebed843c3dc 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 5.5E-60 T 18-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CH53_3622 740bb5daa1701bac390deebed843c3dc 182 PIRSF PIRSF000847 1 181 1.6E-43 T 18-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CH53_2175 d4b3ef8b1677ef66b7b257f65b6a13ae 511 Gene3D G3DSA:3.40.50.1820 55 367 4.6E-18 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2175 d4b3ef8b1677ef66b7b257f65b6a13ae 511 SUPERFAMILY SSF53474 194 354 5.33E-9 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2175 d4b3ef8b1677ef66b7b257f65b6a13ae 511 PIRSF PIRSF014728 3 491 2.9E-195 T 18-10-2018 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type CH53_2175 d4b3ef8b1677ef66b7b257f65b6a13ae 511 Pfam PF10142 PhoPQ-activated pathogenicity-related protein 40 414 9.1E-134 T 18-10-2018 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type CH53_1097 a7f56387ab2e6cfbb5bda29a151b7390 432 Pfam PF17152 Periplasmic sensor domain 55 155 2.3E-29 T 18-10-2018 IPR033417 Periplasmic sensor domain CHASE8 CH53_1097 a7f56387ab2e6cfbb5bda29a151b7390 432 SMART SM00267 248 421 6.4E-62 T 18-10-2018 IPR000160 GGDEF domain CH53_1097 a7f56387ab2e6cfbb5bda29a151b7390 432 Gene3D G3DSA:3.30.70.270 254 420 3.5E-56 T 18-10-2018 CH53_1097 a7f56387ab2e6cfbb5bda29a151b7390 432 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 412 1.3E-46 T 18-10-2018 IPR000160 GGDEF domain CH53_1097 a7f56387ab2e6cfbb5bda29a151b7390 432 SUPERFAMILY SSF55073 264 412 1.8E-47 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_1097 a7f56387ab2e6cfbb5bda29a151b7390 432 Pfam PF00990 Diguanylate cyclase, GGDEF domain 259 411 1.2E-50 T 18-10-2018 IPR000160 GGDEF domain CH53_1320 6e57b976a832eeefb82c5c99ae1dfb22 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 1.3E-22 T 18-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CH53_1320 6e57b976a832eeefb82c5c99ae1dfb22 206 Gene3D G3DSA:3.10.50.40 68 206 3.7E-50 T 18-10-2018 CH53_1320 6e57b976a832eeefb82c5c99ae1dfb22 206 SUPERFAMILY SSF54534 8 205 1.49E-54 T 18-10-2018 CH53_1320 6e57b976a832eeefb82c5c99ae1dfb22 206 Gene3D G3DSA:1.10.287.460 5 67 4.0E-18 T 18-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 CH53_1320 6e57b976a832eeefb82c5c99ae1dfb22 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 2.2E-26 T 18-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CH53_2762 bfd3e83aafe8a8fbcb28261af9d85a0a 146 PRINTS PR00421 Thioredoxin family signature 55 63 3.8E-8 T 18-10-2018 CH53_2762 bfd3e83aafe8a8fbcb28261af9d85a0a 146 PRINTS PR00421 Thioredoxin family signature 103 114 3.8E-8 T 18-10-2018 CH53_2762 bfd3e83aafe8a8fbcb28261af9d85a0a 146 PRINTS PR00421 Thioredoxin family signature 63 72 3.8E-8 T 18-10-2018 CH53_2762 bfd3e83aafe8a8fbcb28261af9d85a0a 146 TIGRFAM TIGR01068 thioredoxin: thioredoxin 43 138 2.4E-34 T 18-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CH53_2762 bfd3e83aafe8a8fbcb28261af9d85a0a 146 Gene3D G3DSA:2.20.28.140 1 34 5.2E-20 T 18-10-2018 CH53_2762 bfd3e83aafe8a8fbcb28261af9d85a0a 146 Pfam PF00085 Thioredoxin 37 137 7.4E-27 T 18-10-2018 IPR013766 Thioredoxin domain GO:0045454 CH53_2762 bfd3e83aafe8a8fbcb28261af9d85a0a 146 PIRSF PIRSF000077 35 139 3.5E-31 T 18-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CH53_2762 bfd3e83aafe8a8fbcb28261af9d85a0a 146 SUPERFAMILY SSF52833 25 139 2.73E-37 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_2762 bfd3e83aafe8a8fbcb28261af9d85a0a 146 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 18-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CH53_2762 bfd3e83aafe8a8fbcb28261af9d85a0a 146 Gene3D G3DSA:3.40.30.10 35 144 5.4E-34 T 18-10-2018 CH53_2499 cb3c81b732b88cb214e536d054277f63 518 SUPERFAMILY SSF55604 444 517 7.85E-21 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_2499 cb3c81b732b88cb214e536d054277f63 518 Pfam PF00367 phosphotransferase system, EIIB 446 478 1.1E-12 T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_2499 cb3c81b732b88cb214e536d054277f63 518 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 456 473 - T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_2499 cb3c81b732b88cb214e536d054277f63 518 Gene3D G3DSA:3.30.1360.60 440 517 9.8E-26 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_2499 cb3c81b732b88cb214e536d054277f63 518 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 419 502 1.4E-19 T 18-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CH53_2499 cb3c81b732b88cb214e536d054277f63 518 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 71 369 3.4E-89 T 18-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CH53_2499 cb3c81b732b88cb214e536d054277f63 518 Pfam PF02378 Phosphotransferase system, EIIC 20 358 1.1E-93 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_3236 09d6ca27c6352e845aa9cf173f18b51c 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 7.2E-18 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_3236 09d6ca27c6352e845aa9cf173f18b51c 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 7.2E-18 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_3236 09d6ca27c6352e845aa9cf173f18b51c 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 7.2E-18 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_3236 09d6ca27c6352e845aa9cf173f18b51c 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 326 343 7.2E-18 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_3236 09d6ca27c6352e845aa9cf173f18b51c 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 236 248 7.2E-18 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_3236 09d6ca27c6352e845aa9cf173f18b51c 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 1.3E-65 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_3236 09d6ca27c6352e845aa9cf173f18b51c 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 1.3E-65 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_3236 09d6ca27c6352e845aa9cf173f18b51c 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 1.3E-65 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_3236 09d6ca27c6352e845aa9cf173f18b51c 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 1.3E-65 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_3236 09d6ca27c6352e845aa9cf173f18b51c 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 242 259 1.3E-65 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_3236 09d6ca27c6352e845aa9cf173f18b51c 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 282 301 1.3E-65 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_3236 09d6ca27c6352e845aa9cf173f18b51c 371 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 326 342 - T 18-10-2018 IPR013793 Porin, Gram-negative type, conserved site CH53_3236 09d6ca27c6352e845aa9cf173f18b51c 371 Pfam PF00267 Gram-negative porin 27 371 1.3E-144 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_3236 09d6ca27c6352e845aa9cf173f18b51c 371 Gene3D G3DSA:2.40.160.10 22 371 7.7E-151 T 18-10-2018 IPR023614 Porin domain superfamily CH53_3236 09d6ca27c6352e845aa9cf173f18b51c 371 SUPERFAMILY SSF56935 22 371 5.49E-79 T 18-10-2018 CH53_2302 b10bb743ba415090ec82df59d5df9dcf 183 Pfam PF10688 Bacterial inner membrane protein 5 162 3.5E-53 T 18-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV CH53_2302 b10bb743ba415090ec82df59d5df9dcf 183 PIRSF PIRSF011443 1 180 4.6E-62 T 18-10-2018 IPR026267 Inner membrane protein YgjV CH53_3095 dc90f7c714176fad347343ff6bb51f26 406 Pfam PF00480 ROK family 88 392 3.0E-90 T 18-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CH53_3095 dc90f7c714176fad347343ff6bb51f26 406 Gene3D G3DSA:3.30.420.40 210 378 7.3E-90 T 18-10-2018 CH53_3095 dc90f7c714176fad347343ff6bb51f26 406 Pfam PF01047 MarR family 25 63 1.1E-6 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CH53_3095 dc90f7c714176fad347343ff6bb51f26 406 SUPERFAMILY SSF53067 88 394 3.62E-55 T 18-10-2018 CH53_3095 dc90f7c714176fad347343ff6bb51f26 406 Gene3D G3DSA:3.30.420.40 93 386 7.3E-90 T 18-10-2018 CH53_3095 dc90f7c714176fad347343ff6bb51f26 406 SUPERFAMILY SSF46785 14 79 1.53E-17 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3095 dc90f7c714176fad347343ff6bb51f26 406 ProSitePatterns PS01125 ROK family signature. 220 247 - T 18-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CH53_3095 dc90f7c714176fad347343ff6bb51f26 406 Gene3D G3DSA:1.10.10.10 5 81 2.8E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2919 94190dc659a6b64bf2e7cf06b2b835e8 159 PIRSF PIRSF006181 1 159 1.7E-55 T 18-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CH53_2919 94190dc659a6b64bf2e7cf06b2b835e8 159 Gene3D G3DSA:3.90.960.10 1 159 1.3E-62 T 18-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CH53_2919 94190dc659a6b64bf2e7cf06b2b835e8 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 1.9E-54 T 18-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CH53_2919 94190dc659a6b64bf2e7cf06b2b835e8 159 SUPERFAMILY SSF55826 2 155 3.01E-44 T 18-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CH53_2919 94190dc659a6b64bf2e7cf06b2b835e8 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 145 4.5E-24 T 18-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CH53_2026 42afa36a88f45565af63d53da02b9eb5 90 Pfam PF06611 Protein of unknown function (DUF1145) 1 58 1.4E-27 T 18-10-2018 IPR009525 Protein of unknown function DUF1145 CH53_2124 c04df827847a0176d4ffe175d1e122a5 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 18-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CH53_2124 c04df827847a0176d4ffe175d1e122a5 394 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 18-10-2018 IPR020610 Thiolase, active site GO:0016747 CH53_2124 c04df827847a0176d4ffe175d1e122a5 394 Gene3D G3DSA:3.40.47.10 6 276 5.6E-161 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_2124 c04df827847a0176d4ffe175d1e122a5 394 SUPERFAMILY SSF53901 4 270 1.0E-91 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_2124 c04df827847a0176d4ffe175d1e122a5 394 Pfam PF00108 Thiolase, N-terminal domain 4 263 5.0E-107 T 18-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CH53_2124 c04df827847a0176d4ffe175d1e122a5 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.6E-151 T 18-10-2018 IPR002155 Thiolase GO:0016747 CH53_2124 c04df827847a0176d4ffe175d1e122a5 394 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 18-10-2018 IPR020613 Thiolase, conserved site GO:0016747 CH53_2124 c04df827847a0176d4ffe175d1e122a5 394 Pfam PF02803 Thiolase, C-terminal domain 270 392 1.4E-51 T 18-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CH53_2124 c04df827847a0176d4ffe175d1e122a5 394 PIRSF PIRSF000429 1 394 6.3E-137 T 18-10-2018 IPR002155 Thiolase GO:0016747 CH53_2124 c04df827847a0176d4ffe175d1e122a5 394 SUPERFAMILY SSF53901 271 392 9.49E-44 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_2124 c04df827847a0176d4ffe175d1e122a5 394 Gene3D G3DSA:3.40.47.10 126 390 5.6E-161 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_1709 236f384c82b0af6af8c6f8f88e77f702 140 Gene3D G3DSA:2.60.40.790 33 138 5.5E-18 T 18-10-2018 IPR008978 HSP20-like chaperone CH53_1709 236f384c82b0af6af8c6f8f88e77f702 140 Pfam PF00011 Hsp20/alpha crystallin family 42 137 2.3E-19 T 18-10-2018 IPR002068 Alpha crystallin/Hsp20 domain CH53_1709 236f384c82b0af6af8c6f8f88e77f702 140 SUPERFAMILY SSF49764 30 137 2.16E-18 T 18-10-2018 IPR008978 HSP20-like chaperone CH53_1709 236f384c82b0af6af8c6f8f88e77f702 140 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 137 42.894 T 18-10-2018 IPR023728 Small heat shock protein IbpA CH53_4417 8b87bdf1f9f1d8fd694a4911e2497c19 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.0E-7 T 18-10-2018 CH53_4417 8b87bdf1f9f1d8fd694a4911e2497c19 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.0E-7 T 18-10-2018 CH53_4417 8b87bdf1f9f1d8fd694a4911e2497c19 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.0E-7 T 18-10-2018 CH53_4417 8b87bdf1f9f1d8fd694a4911e2497c19 434 Gene3D G3DSA:3.50.50.100 1 409 3.4E-117 T 18-10-2018 CH53_4417 8b87bdf1f9f1d8fd694a4911e2497c19 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 2.7E-15 T 18-10-2018 CH53_4417 8b87bdf1f9f1d8fd694a4911e2497c19 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 2.7E-15 T 18-10-2018 CH53_4417 8b87bdf1f9f1d8fd694a4911e2497c19 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.7E-15 T 18-10-2018 CH53_4417 8b87bdf1f9f1d8fd694a4911e2497c19 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 2.7E-15 T 18-10-2018 CH53_4417 8b87bdf1f9f1d8fd694a4911e2497c19 434 SUPERFAMILY SSF51905 3 339 2.18E-32 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_4417 8b87bdf1f9f1d8fd694a4911e2497c19 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 3.9E-65 T 18-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CH53_150 dfa11dcec1579df0a5f01f0323b545bd 328 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 325 40.506 T 18-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 CH53_150 dfa11dcec1579df0a5f01f0323b545bd 328 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 321 1.9E-108 T 18-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 CH53_150 dfa11dcec1579df0a5f01f0323b545bd 328 SUPERFAMILY SSF52540 46 183 3.1E-12 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_150 dfa11dcec1579df0a5f01f0323b545bd 328 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 318 3.4E-115 T 18-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 CH53_4416 28f3786ad560bef5658468bb5e4c7bd0 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 2.5E-10 T 18-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CH53_2253 552fb3372c7defc11d710a618d0d0089 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 5.0E-104 T 18-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CH53_2253 552fb3372c7defc11d710a618d0d0089 260 Pfam PF02405 Permease MlaE 45 256 1.7E-75 T 18-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 CH53_162 3649e4bfcc7c4ed81426ef77605c2f2f 246 Pfam PF13353 4Fe-4S single cluster domain 16 130 1.5E-17 T 18-10-2018 CH53_162 3649e4bfcc7c4ed81426ef77605c2f2f 246 SUPERFAMILY SSF102114 23 211 1.02E-22 T 18-10-2018 CH53_162 3649e4bfcc7c4ed81426ef77605c2f2f 246 Gene3D G3DSA:3.20.20.70 2 246 3.3E-104 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_162 3649e4bfcc7c4ed81426ef77605c2f2f 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 18-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CH53_162 3649e4bfcc7c4ed81426ef77605c2f2f 246 Pfam PF04055 Radical SAM superfamily 24 178 4.0E-31 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_162 3649e4bfcc7c4ed81426ef77605c2f2f 246 PIRSF PIRSF000371 2 47 5.6E-11 T 18-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CH53_162 3649e4bfcc7c4ed81426ef77605c2f2f 246 PIRSF PIRSF000371 44 246 6.5E-44 T 18-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CH53_162 3649e4bfcc7c4ed81426ef77605c2f2f 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 8.6E-106 T 18-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 CH53_2488 67e5ed7eb6384d3453ff3380c552071d 238 Gene3D G3DSA:3.40.50.720 1 237 1.1E-48 T 18-10-2018 CH53_2488 67e5ed7eb6384d3453ff3380c552071d 238 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 126 154 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CH53_2488 67e5ed7eb6384d3453ff3380c552071d 238 SUPERFAMILY SSF51735 2 235 2.16E-49 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2488 67e5ed7eb6384d3453ff3380c552071d 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.9E-15 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2488 67e5ed7eb6384d3453ff3380c552071d 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 177 4.9E-15 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2488 67e5ed7eb6384d3453ff3380c552071d 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 158 4.9E-15 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2488 67e5ed7eb6384d3453ff3380c552071d 238 Pfam PF00106 short chain dehydrogenase 2 179 3.9E-36 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_1459 7b058f25612a1e569a9cb47373a2ec4a 66 Pfam PF03889 Domain of unknown function 9 45 5.1E-22 T 18-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 CH53_3202 780eaf7c230336315f6826b70b0feda0 236 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 68 - T 18-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CH53_3202 780eaf7c230336315f6826b70b0feda0 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 1.2E-6 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_3202 780eaf7c230336315f6826b70b0feda0 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 1.2E-6 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_3202 780eaf7c230336315f6826b70b0feda0 236 SUPERFAMILY SSF46689 14 93 2.41E-19 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3202 780eaf7c230336315f6826b70b0feda0 236 Pfam PF09209 Domain of unknown function (DUF1956) 104 230 3.0E-32 T 18-10-2018 IPR015292 Transcription regulator YbiH, C-terminal CH53_3202 780eaf7c230336315f6826b70b0feda0 236 SUPERFAMILY SSF48498 101 231 7.56E-34 T 18-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH53_3202 780eaf7c230336315f6826b70b0feda0 236 Gene3D G3DSA:1.10.357.10 73 236 9.7E-49 T 18-10-2018 CH53_3202 780eaf7c230336315f6826b70b0feda0 236 Gene3D G3DSA:1.10.10.60 11 72 3.2E-24 T 18-10-2018 CH53_3202 780eaf7c230336315f6826b70b0feda0 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 4.4E-13 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_3533 d25d3c3f7ce44ea5c3e7600a2904797c 193 PIRSF PIRSF003159 1 182 1.4E-90 T 18-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CH53_3533 d25d3c3f7ce44ea5c3e7600a2904797c 193 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 173 2.6E-84 T 18-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CH53_3533 d25d3c3f7ce44ea5c3e7600a2904797c 193 SUPERFAMILY SSF160930 5 161 1.44E-65 T 18-10-2018 CH53_3533 d25d3c3f7ce44ea5c3e7600a2904797c 193 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 187 46.339 T 18-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CH53_3533 d25d3c3f7ce44ea5c3e7600a2904797c 193 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 193 3.0E-111 T 18-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CH53_3072 3d378e93b265628aa9cfc8cfa0cf233a 312 Hamap MF_01431 Pyrimidine-specific ribonucleoside hydrolase RihA [rihA]. 1 311 63.925 T 18-10-2018 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA GO:0006206|GO:0015949|GO:0045437 CH53_3072 3d378e93b265628aa9cfc8cfa0cf233a 312 Gene3D G3DSA:3.90.245.10 1 311 1.1E-131 T 18-10-2018 IPR036452 Ribonucleoside hydrolase-like CH53_3072 3d378e93b265628aa9cfc8cfa0cf233a 312 SUPERFAMILY SSF53590 2 310 3.27E-105 T 18-10-2018 IPR036452 Ribonucleoside hydrolase-like CH53_3072 3d378e93b265628aa9cfc8cfa0cf233a 312 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 18-10-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 CH53_3072 3d378e93b265628aa9cfc8cfa0cf233a 312 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 300 8.2E-91 T 18-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 ProSitePatterns PS01244 Aconitase family signature 2. 405 418 - T 18-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 PRINTS PR00415 Aconitase family signature 201 214 3.3E-50 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 PRINTS PR00415 Aconitase family signature 125 138 3.3E-50 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 PRINTS PR00415 Aconitase family signature 88 101 3.3E-50 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 PRINTS PR00415 Aconitase family signature 114 122 3.3E-50 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 PRINTS PR00415 Aconitase family signature 215 228 3.3E-50 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 PRINTS PR00415 Aconitase family signature 405 418 3.3E-50 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 PRINTS PR00415 Aconitase family signature 292 306 3.3E-50 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 PRINTS PR00415 Aconitase family signature 139 154 3.3E-50 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 PRINTS PR00415 Aconitase family signature 349 360 3.3E-50 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 8 471 2.4E-267 T 18-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 SUPERFAMILY SSF53732 4 473 1.96E-169 T 18-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 Gene3D G3DSA:3.30.499.10 331 476 9.2E-52 T 18-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 Gene3D G3DSA:3.30.499.20 10 292 3.6E-100 T 18-10-2018 CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 7 472 61.879 T 18-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 18-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CH53_1037 04b29878fb40fe9bc41fcd7ccec50509 476 Pfam PF00330 Aconitase family (aconitate hydratase) 14 463 7.8E-162 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CH53_1121 3a076e839e4782c16c43fde6f458eccb 416 Pfam PF01734 Patatin-like phospholipase 27 195 1.9E-19 T 18-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CH53_1121 3a076e839e4782c16c43fde6f458eccb 416 Gene3D G3DSA:3.40.1090.10 15 107 1.6E-11 T 18-10-2018 CH53_1121 3a076e839e4782c16c43fde6f458eccb 416 SUPERFAMILY SSF52151 22 293 8.37E-44 T 18-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CH53_698 38a8a434304229065ab06a4b78ecd684 113 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 31.471 T 18-10-2018 IPR026592 Outer membrane protein assembly factor BamE CH53_698 38a8a434304229065ab06a4b78ecd684 113 Gene3D G3DSA:3.30.1450.10 34 113 9.8E-31 T 18-10-2018 IPR037873 BamE-like CH53_698 38a8a434304229065ab06a4b78ecd684 113 Pfam PF04355 SmpA / OmlA family 35 104 4.5E-26 T 18-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CH53_689 248a3227649704473aebc00425711e36 248 SUPERFAMILY SSF53335 15 200 1.66E-29 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_689 248a3227649704473aebc00425711e36 248 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 122 128 - T 18-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CH53_689 248a3227649704473aebc00425711e36 248 Gene3D G3DSA:3.40.50.150 14 244 5.2E-55 T 18-10-2018 CH53_689 248a3227649704473aebc00425711e36 248 Pfam PF05175 Methyltransferase small domain 42 179 8.1E-14 T 18-10-2018 IPR007848 Methyltransferase small domain GO:0008168 CH53_689 248a3227649704473aebc00425711e36 248 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 119 131 1.1E-5 T 18-10-2018 CH53_689 248a3227649704473aebc00425711e36 248 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 51 65 1.1E-5 T 18-10-2018 CH53_689 248a3227649704473aebc00425711e36 248 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 149 173 1.1E-5 T 18-10-2018 CH53_689 248a3227649704473aebc00425711e36 248 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 14 248 53.232 T 18-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 CH53_802 305f34731f3f07f710fc9ab6f9e6318f 238 SMART SM00850 142 236 2.9E-23 T 18-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CH53_802 305f34731f3f07f710fc9ab6f9e6318f 238 Pfam PF00072 Response regulator receiver domain 4 112 1.4E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_802 305f34731f3f07f710fc9ab6f9e6318f 238 Gene3D G3DSA:3.40.50.2300 1 129 2.3E-31 T 18-10-2018 CH53_802 305f34731f3f07f710fc9ab6f9e6318f 238 SUPERFAMILY SSF52172 1 130 2.13E-32 T 18-10-2018 IPR011006 CheY-like superfamily CH53_802 305f34731f3f07f710fc9ab6f9e6318f 238 SMART SM00448 2 112 1.2E-30 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_802 305f34731f3f07f710fc9ab6f9e6318f 238 Pfam PF04397 LytTr DNA-binding domain 143 235 1.5E-24 T 18-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CH53_802 305f34731f3f07f710fc9ab6f9e6318f 238 Gene3D G3DSA:2.40.50.1020 130 237 7.2E-12 T 18-10-2018 CH53_2089 3878d37a85f523cf8e459d9bd4317739 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 18-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CH53_2089 3878d37a85f523cf8e459d9bd4317739 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 18-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CH53_2089 3878d37a85f523cf8e459d9bd4317739 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.9E-20 T 18-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CH53_2089 3878d37a85f523cf8e459d9bd4317739 127 Gene3D G3DSA:1.20.5.1030 66 123 4.9E-16 T 18-10-2018 IPR038379 SecE superfamily CH53_2089 3878d37a85f523cf8e459d9bd4317739 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 18-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CH53_2089 3878d37a85f523cf8e459d9bd4317739 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.8E-38 T 18-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CH53_2089 3878d37a85f523cf8e459d9bd4317739 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 1.8E-38 T 18-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CH53_2089 3878d37a85f523cf8e459d9bd4317739 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.8E-38 T 18-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CH53_2089 3878d37a85f523cf8e459d9bd4317739 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.8E-38 T 18-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CH53_766 e7b5bd1d309b7aaedacaf5fe4410837e 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 44.715 T 18-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CH53_766 e7b5bd1d309b7aaedacaf5fe4410837e 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 5.2E-22 T 18-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CH53_766 e7b5bd1d309b7aaedacaf5fe4410837e 251 Gene3D G3DSA:3.60.15.10 1 251 1.6E-92 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_766 e7b5bd1d309b7aaedacaf5fe4410837e 251 SUPERFAMILY SSF56281 1 251 2.23E-68 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_766 e7b5bd1d309b7aaedacaf5fe4410837e 251 PIRSF PIRSF005457 1 251 2.9E-86 T 18-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CH53_766 e7b5bd1d309b7aaedacaf5fe4410837e 251 Pfam PF00753 Metallo-beta-lactamase superfamily 13 165 7.5E-18 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_766 e7b5bd1d309b7aaedacaf5fe4410837e 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 1.3E-101 T 18-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CH53_766 e7b5bd1d309b7aaedacaf5fe4410837e 251 SMART SM00849 11 165 4.2E-39 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_720 35c3dc1eb35e2ec399da8e6eac0ebee7 134 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 9.4E-19 T 18-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CH53_720 35c3dc1eb35e2ec399da8e6eac0ebee7 134 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 17.344 T 18-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CH53_450 491158640bd9c03470bd366f301305e1 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 8.3E-73 T 18-10-2018 CH53_450 491158640bd9c03470bd366f301305e1 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 8.3E-73 T 18-10-2018 CH53_450 491158640bd9c03470bd366f301305e1 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 26 47 8.3E-73 T 18-10-2018 CH53_450 491158640bd9c03470bd366f301305e1 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 100 118 8.3E-73 T 18-10-2018 CH53_450 491158640bd9c03470bd366f301305e1 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 98 8.3E-73 T 18-10-2018 CH53_450 491158640bd9c03470bd366f301305e1 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 52 69 8.3E-73 T 18-10-2018 CH53_450 491158640bd9c03470bd366f301305e1 219 PIRSF PIRSF002764 1 219 3.1E-86 T 18-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CH53_450 491158640bd9c03470bd366f301305e1 219 Pfam PF03379 CcmB protein 3 216 1.4E-92 T 18-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_450 491158640bd9c03470bd366f301305e1 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 5 215 2.4E-96 T 18-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CH53_306 e8182444b2a97982367c43d0de7208b1 548 Gene3D G3DSA:3.20.130.10 348 537 6.2E-55 T 18-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 CH53_306 e8182444b2a97982367c43d0de7208b1 548 SUPERFAMILY SSF117457 361 536 5.23E-58 T 18-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 CH53_306 e8182444b2a97982367c43d0de7208b1 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 18-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CH53_306 e8182444b2a97982367c43d0de7208b1 548 PIRSF PIRSF001394 30 548 8.3E-213 T 18-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CH53_306 e8182444b2a97982367c43d0de7208b1 548 Pfam PF05683 Fumarase C-terminus 332 537 4.2E-87 T 18-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CH53_306 e8182444b2a97982367c43d0de7208b1 548 Pfam PF05681 Fumarate hydratase (Fumerase) 52 326 1.4E-77 T 18-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CH53_306 e8182444b2a97982367c43d0de7208b1 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 536 2.0E-54 T 18-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CH53_3004 1f1d0248f11f5651ed78fb61f761abdc 580 Pfam PF00664 ABC transporter transmembrane region 27 280 1.5E-14 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CH53_3004 1f1d0248f11f5651ed78fb61f761abdc 580 Pfam PF00005 ABC transporter 349 496 7.2E-32 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3004 1f1d0248f11f5651ed78fb61f761abdc 580 SMART SM00382 358 544 3.0E-15 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3004 1f1d0248f11f5651ed78fb61f761abdc 580 Gene3D G3DSA:3.40.50.300 319 565 1.1E-67 T 18-10-2018 CH53_3004 1f1d0248f11f5651ed78fb61f761abdc 580 Gene3D G3DSA:1.20.1560.10 10 318 1.5E-37 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_3004 1f1d0248f11f5651ed78fb61f761abdc 580 SUPERFAMILY SSF90123 11 320 5.89E-47 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_3004 1f1d0248f11f5651ed78fb61f761abdc 580 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 18 558 7.0E-241 T 18-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 CH53_3004 1f1d0248f11f5651ed78fb61f761abdc 580 SUPERFAMILY SSF52540 321 557 1.68E-64 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3004 1f1d0248f11f5651ed78fb61f761abdc 580 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1800 eb60acf7518d55c7272df6bc2b9bffe2 89 Gene3D G3DSA:1.10.1580.20 1 89 6.3E-46 T 18-10-2018 IPR038134 YihD-like superfamily CH53_1800 eb60acf7518d55c7272df6bc2b9bffe2 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 3.0E-43 T 18-10-2018 IPR009383 Protein of unknown function DUF1040 CH53_1800 eb60acf7518d55c7272df6bc2b9bffe2 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 9.0E-46 T 18-10-2018 IPR009383 Protein of unknown function DUF1040 CH53_1327 78e607a6ca23d44b60c5b28a88f6e416 249 Pfam PF00326 Prolyl oligopeptidase family 88 234 4.7E-14 T 18-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CH53_1327 78e607a6ca23d44b60c5b28a88f6e416 249 SUPERFAMILY SSF53474 11 249 3.05E-40 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_1327 78e607a6ca23d44b60c5b28a88f6e416 249 Gene3D G3DSA:3.40.50.1820 2 249 6.6E-59 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_996 b8e20db2e49ae46bf02c47772f0b2850 254 Gene3D G3DSA:1.20.120.530 97 236 7.8E-30 T 18-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CH53_996 b8e20db2e49ae46bf02c47772f0b2850 254 Gene3D G3DSA:1.10.10.10 1 75 5.4E-27 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_996 b8e20db2e49ae46bf02c47772f0b2850 254 SUPERFAMILY SSF48008 96 235 2.07E-21 T 18-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CH53_996 b8e20db2e49ae46bf02c47772f0b2850 254 SMART SM00895 99 227 1.6E-19 T 18-10-2018 IPR011711 GntR, C-terminal CH53_996 b8e20db2e49ae46bf02c47772f0b2850 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.7E-22 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_996 b8e20db2e49ae46bf02c47772f0b2850 254 SMART SM00345 15 74 1.6E-26 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_996 b8e20db2e49ae46bf02c47772f0b2850 254 Pfam PF07729 FCD domain 99 226 2.2E-19 T 18-10-2018 IPR011711 GntR, C-terminal CH53_996 b8e20db2e49ae46bf02c47772f0b2850 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.0E-9 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_996 b8e20db2e49ae46bf02c47772f0b2850 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.0E-9 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_996 b8e20db2e49ae46bf02c47772f0b2850 254 SUPERFAMILY SSF46785 5 77 2.56E-21 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1248 d486a44e8d1ba9dd999bc3ac3eac6ba1 238 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1248 d486a44e8d1ba9dd999bc3ac3eac6ba1 238 SMART SM00382 32 220 1.4E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1248 d486a44e8d1ba9dd999bc3ac3eac6ba1 238 Pfam PF00005 ABC transporter 24 171 4.3E-34 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1248 d486a44e8d1ba9dd999bc3ac3eac6ba1 238 Gene3D G3DSA:3.40.50.300 1 236 8.4E-75 T 18-10-2018 CH53_1248 d486a44e8d1ba9dd999bc3ac3eac6ba1 238 SUPERFAMILY SSF52540 3 229 1.13E-65 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_372 8e1a93c043a8692e8b65f8874346bc5c 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 87 107 3.2E-10 T 18-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CH53_372 8e1a93c043a8692e8b65f8874346bc5c 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 420 442 3.2E-10 T 18-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CH53_372 8e1a93c043a8692e8b65f8874346bc5c 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 61 85 3.2E-10 T 18-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CH53_372 8e1a93c043a8692e8b65f8874346bc5c 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 268 290 3.2E-10 T 18-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CH53_372 8e1a93c043a8692e8b65f8874346bc5c 614 Pfam PF00361 Proton-conducting membrane transporter 136 428 2.6E-95 T 18-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_372 8e1a93c043a8692e8b65f8874346bc5c 614 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 124 2.7E-23 T 18-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_372 8e1a93c043a8692e8b65f8874346bc5c 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 2.1E-56 T 18-10-2018 CH53_372 8e1a93c043a8692e8b65f8874346bc5c 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 2.1E-56 T 18-10-2018 CH53_372 8e1a93c043a8692e8b65f8874346bc5c 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 2.1E-56 T 18-10-2018 CH53_372 8e1a93c043a8692e8b65f8874346bc5c 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 2.1E-56 T 18-10-2018 CH53_372 8e1a93c043a8692e8b65f8874346bc5c 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 2.1E-56 T 18-10-2018 CH53_372 8e1a93c043a8692e8b65f8874346bc5c 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 2.1E-56 T 18-10-2018 CH53_372 8e1a93c043a8692e8b65f8874346bc5c 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 181 2.1E-56 T 18-10-2018 CH53_372 8e1a93c043a8692e8b65f8874346bc5c 614 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 611 1.6E-232 T 18-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_256 508d58baa346653fd9709c3df00cb717 233 SUPERFAMILY SSF48317 10 220 6.02E-21 T 18-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CH53_256 508d58baa346653fd9709c3df00cb717 233 SMART SM00014 95 210 4.9E-11 T 18-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CH53_256 508d58baa346653fd9709c3df00cb717 233 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 2 233 41.423 T 18-10-2018 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 CH53_256 508d58baa346653fd9709c3df00cb717 233 Gene3D G3DSA:1.20.144.10 121 227 7.3E-10 T 18-10-2018 CH53_256 508d58baa346653fd9709c3df00cb717 233 Pfam PF01569 PAP2 superfamily 123 201 4.8E-8 T 18-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CH53_231 68a9e58ff614a4842e84e8ad66904cc2 283 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 18-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CH53_231 68a9e58ff614a4842e84e8ad66904cc2 283 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 18-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CH53_231 68a9e58ff614a4842e84e8ad66904cc2 283 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 18-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CH53_231 68a9e58ff614a4842e84e8ad66904cc2 283 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 43.141 T 18-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CH53_231 68a9e58ff614a4842e84e8ad66904cc2 283 SMART SM00518 3 279 4.7E-124 T 18-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CH53_231 68a9e58ff614a4842e84e8ad66904cc2 283 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 1.7E-105 T 18-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CH53_231 68a9e58ff614a4842e84e8ad66904cc2 283 Pfam PF01261 Xylose isomerase-like TIM barrel 20 239 7.9E-41 T 18-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CH53_231 68a9e58ff614a4842e84e8ad66904cc2 283 Gene3D G3DSA:3.20.20.150 1 282 1.7E-108 T 18-10-2018 CH53_231 68a9e58ff614a4842e84e8ad66904cc2 283 SUPERFAMILY SSF51658 1 279 1.7E-99 T 18-10-2018 IPR036237 Xylose isomerase-like superfamily CH53_578 68acd2e4923aaa29273f8b3a56c6c6bf 156 Pfam PF00578 AhpC/TSA family 7 134 1.7E-39 T 18-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CH53_578 68acd2e4923aaa29273f8b3a56c6c6bf 156 SUPERFAMILY SSF52833 1 153 1.14E-49 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_578 68acd2e4923aaa29273f8b3a56c6c6bf 156 PIRSF PIRSF000239 1 149 3.3E-18 T 18-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CH53_578 68acd2e4923aaa29273f8b3a56c6c6bf 156 Gene3D G3DSA:3.40.30.10 4 155 2.4E-48 T 18-10-2018 CH53_3810 c1d0ad6dd3271eb297ac4986ac5602e9 289 Gene3D G3DSA:1.10.10.10 1 79 2.8E-27 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3810 c1d0ad6dd3271eb297ac4986ac5602e9 289 Gene3D G3DSA:3.40.50.10490 94 277 9.8E-43 T 18-10-2018 CH53_3810 c1d0ad6dd3271eb297ac4986ac5602e9 289 SUPERFAMILY SSF53697 94 277 7.28E-43 T 18-10-2018 CH53_3810 c1d0ad6dd3271eb297ac4986ac5602e9 289 SUPERFAMILY SSF46689 1 80 8.24E-21 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3810 c1d0ad6dd3271eb297ac4986ac5602e9 289 Pfam PF01380 SIS domain 124 252 1.7E-25 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_3810 c1d0ad6dd3271eb297ac4986ac5602e9 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 6.3E-30 T 18-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CH53_2339 4f28de23dbe029e176285dd28da653bf 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 208 1.9E-78 T 18-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CH53_2339 4f28de23dbe029e176285dd28da653bf 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 6.7E-81 T 18-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CH53_2339 4f28de23dbe029e176285dd28da653bf 217 SUPERFAMILY SSF55821 7 210 2.52E-83 T 18-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CH53_2339 4f28de23dbe029e176285dd28da653bf 217 Gene3D G3DSA:3.90.870.10 1 217 7.1E-94 T 18-10-2018 CH53_2339 4f28de23dbe029e176285dd28da653bf 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 41.648 T 18-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CH53_4219 0183744cdc6142aa08ddf1f01f20d3b2 73 Pfam PF09926 Uncharacterized small protein (DUF2158) 7 55 1.4E-10 T 18-10-2018 IPR019226 Protein of unknown function DUF2158 CH53_4145 dedc5837c42fa6f23456f303a912e8c1 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.0E-22 T 18-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CH53_4145 dedc5837c42fa6f23456f303a912e8c1 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.0E-22 T 18-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CH53_4145 dedc5837c42fa6f23456f303a912e8c1 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.0E-22 T 18-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CH53_4145 dedc5837c42fa6f23456f303a912e8c1 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.995 T 18-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CH53_4145 dedc5837c42fa6f23456f303a912e8c1 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.4E-26 T 18-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CH53_4145 dedc5837c42fa6f23456f303a912e8c1 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 18-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_4145 dedc5837c42fa6f23456f303a912e8c1 65 Pfam PF01632 Ribosomal protein L35 2 60 1.4E-22 T 18-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_4145 dedc5837c42fa6f23456f303a912e8c1 65 Gene3D G3DSA:2.40.50.530 1 65 4.8E-19 T 18-10-2018 CH53_4145 dedc5837c42fa6f23456f303a912e8c1 65 SUPERFAMILY SSF143034 2 64 3.14E-22 T 18-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_3898 be882e9fcae398412be553e9229c0858 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 3.5E-14 T 18-10-2018 CH53_3898 be882e9fcae398412be553e9229c0858 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 3.5E-14 T 18-10-2018 CH53_3898 be882e9fcae398412be553e9229c0858 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 3.5E-14 T 18-10-2018 CH53_3898 be882e9fcae398412be553e9229c0858 198 Gene3D G3DSA:3.40.50.880 1 192 8.5E-59 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_3898 be882e9fcae398412be553e9229c0858 198 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 4.0E-6 T 18-10-2018 CH53_3898 be882e9fcae398412be553e9229c0858 198 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 4.0E-6 T 18-10-2018 CH53_3898 be882e9fcae398412be553e9229c0858 198 SUPERFAMILY SSF52317 3 192 1.94E-46 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_3898 be882e9fcae398412be553e9229c0858 198 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 187 4.5E-54 T 18-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CH53_3898 be882e9fcae398412be553e9229c0858 198 Pfam PF00117 Glutamine amidotransferase class-I 6 186 6.8E-44 T 18-10-2018 IPR017926 Glutamine amidotransferase CH53_3898 be882e9fcae398412be553e9229c0858 198 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.1E-36 T 18-10-2018 CH53_3898 be882e9fcae398412be553e9229c0858 198 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.1E-36 T 18-10-2018 CH53_3898 be882e9fcae398412be553e9229c0858 198 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.1E-36 T 18-10-2018 CH53_3898 be882e9fcae398412be553e9229c0858 198 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.1E-36 T 18-10-2018 CH53_3898 be882e9fcae398412be553e9229c0858 198 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.1E-36 T 18-10-2018 CH53_3898 be882e9fcae398412be553e9229c0858 198 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.1E-36 T 18-10-2018 CH53_4116 de5259a5dcf728cdc34d10df5bc1f6e6 123 Gene3D G3DSA:2.60.300.12 18 123 1.0E-34 T 18-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CH53_4116 de5259a5dcf728cdc34d10df5bc1f6e6 123 SUPERFAMILY SSF89360 19 112 1.14E-26 T 18-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CH53_4116 de5259a5dcf728cdc34d10df5bc1f6e6 123 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 9.5E-19 T 18-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CH53_4116 de5259a5dcf728cdc34d10df5bc1f6e6 123 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 122 8.7E-33 T 18-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CH53_4116 de5259a5dcf728cdc34d10df5bc1f6e6 123 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 104 121 - T 18-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CH53_530 69958a8d819349ecca2c1b472ccca562 402 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 276 1.9E-17 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH53_530 69958a8d819349ecca2c1b472ccca562 402 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 384 1.7E-48 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CH53_530 69958a8d819349ecca2c1b472ccca562 402 Gene3D G3DSA:1.10.287.470 96 187 1.8E-16 T 18-10-2018 CH53_530 69958a8d819349ecca2c1b472ccca562 402 Gene3D G3DSA:2.40.420.20 321 401 5.8E-13 T 18-10-2018 CH53_530 69958a8d819349ecca2c1b472ccca562 402 SUPERFAMILY SSF111369 54 265 5.49E-22 T 18-10-2018 CH53_530 69958a8d819349ecca2c1b472ccca562 402 Gene3D G3DSA:2.40.30.170 220 320 8.1E-32 T 18-10-2018 CH53_3658 6ed053b5fd854de65a68550cb1e9ee77 65 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 1 63 2.7E-17 T 18-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 CH53_3658 6ed053b5fd854de65a68550cb1e9ee77 65 Pfam PF04717 Type VI secretion system, phage-baseplate injector 1 52 3.5E-15 T 18-10-2018 IPR006531 Gp5 N-terminal CH53_3658 6ed053b5fd854de65a68550cb1e9ee77 65 Gene3D G3DSA:2.60.220.40 24 64 9.9E-10 T 18-10-2018 CH53_2023 b210795615dd1113006d6565ce31faa7 208 Pfam PF07947 YhhN family 26 206 2.9E-45 T 18-10-2018 IPR012506 YhhN-like GO:0016021 CH53_27 825c1da14d84695498d2cecb9575328f 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 132 143 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_27 825c1da14d84695498d2cecb9575328f 244 Gene3D G3DSA:3.30.70.20 30 86 2.6E-9 T 18-10-2018 CH53_27 825c1da14d84695498d2cecb9575328f 244 Gene3D G3DSA:3.30.70.20 87 237 2.2E-57 T 18-10-2018 CH53_27 825c1da14d84695498d2cecb9575328f 244 SUPERFAMILY SSF54862 40 222 3.56E-65 T 18-10-2018 CH53_27 825c1da14d84695498d2cecb9575328f 244 Pfam PF13247 4Fe-4S dicluster domain 94 187 5.1E-29 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_3830 0faf7c70e1df288a072f7ceddd4ee205 262 PIRSF PIRSF000456 4 262 2.5E-82 T 18-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CH53_3830 0faf7c70e1df288a072f7ceddd4ee205 262 SUPERFAMILY SSF51161 2 262 4.53E-64 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily CH53_3830 0faf7c70e1df288a072f7ceddd4ee205 262 Gene3D G3DSA:2.160.10.10 1 196 8.0E-49 T 18-10-2018 CH53_3830 0faf7c70e1df288a072f7ceddd4ee205 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 45 2.0E-7 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_3830 0faf7c70e1df288a072f7ceddd4ee205 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 5.5E-9 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_3830 0faf7c70e1df288a072f7ceddd4ee205 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.3E-79 T 18-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CH53_3830 0faf7c70e1df288a072f7ceddd4ee205 262 Gene3D G3DSA:1.20.1180.10 205 262 3.7E-7 T 18-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 CH53_3830 0faf7c70e1df288a072f7ceddd4ee205 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 18-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CH53_3830 0faf7c70e1df288a072f7ceddd4ee205 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 8.2E-11 T 18-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 CH53_2875 70eb157966fa0ccc6e1de75f03e8f716 112 SUPERFAMILY SSF54913 1 112 2.13E-42 T 18-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CH53_2875 70eb157966fa0ccc6e1de75f03e8f716 112 SMART SM00938 4 105 5.9E-61 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CH53_2875 70eb157966fa0ccc6e1de75f03e8f716 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 18-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CH53_2875 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 83 103 3.1E-41 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CH53_2875 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 2 17 3.1E-41 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CH53_2875 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 23 41 3.1E-41 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CH53_2875 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 52 75 3.1E-41 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CH53_2875 70eb157966fa0ccc6e1de75f03e8f716 112 PIRSF PIRSF039144 1 112 3.8E-54 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CH53_2875 70eb157966fa0ccc6e1de75f03e8f716 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.8E-41 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CH53_2875 70eb157966fa0ccc6e1de75f03e8f716 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 18-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CH53_2875 70eb157966fa0ccc6e1de75f03e8f716 112 Gene3D G3DSA:3.30.70.120 1 112 9.8E-45 T 18-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CH53_3129 2b1df731bf86f9f8e21cdd8de3e7f981 358 Gene3D G3DSA:3.60.15.10 46 351 3.6E-19 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_3129 2b1df731bf86f9f8e21cdd8de3e7f981 358 ProSitePatterns PS00607 cAMP phosphodiesterases class-II signature. 132 146 - T 18-10-2018 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site GO:0008081 CH53_3129 2b1df731bf86f9f8e21cdd8de3e7f981 358 PIRSF PIRSF000962 22 358 3.9E-121 T 18-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 CH53_3129 2b1df731bf86f9f8e21cdd8de3e7f981 358 SUPERFAMILY SSF56281 56 338 5.96E-23 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_3129 2b1df731bf86f9f8e21cdd8de3e7f981 358 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 264 275 3.2E-29 T 18-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 CH53_3129 2b1df731bf86f9f8e21cdd8de3e7f981 358 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 128 146 3.2E-29 T 18-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 CH53_3129 2b1df731bf86f9f8e21cdd8de3e7f981 358 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 155 176 3.2E-29 T 18-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 CH53_3129 2b1df731bf86f9f8e21cdd8de3e7f981 358 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 283 296 3.2E-29 T 18-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 CH53_3129 2b1df731bf86f9f8e21cdd8de3e7f981 358 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 309 320 3.2E-29 T 18-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 CH53_3129 2b1df731bf86f9f8e21cdd8de3e7f981 358 Pfam PF02112 cAMP phosphodiesterases class-II 55 353 4.0E-55 T 18-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 CH53_3465 12077ad220c0f0ab4d5b25486d062779 150 ProDom PD097062 ZINC RESISTANCE-ASSOCIATED PERIPLASMIC PRECURSOR SIGNAL YJAI SEQUENCING DIRECT DFFA 43 122 1.0E-24 T 18-10-2018 IPR020365 Zinc resistance-associated protein, ZraP GO:0008270|GO:0042597 CH53_3465 12077ad220c0f0ab4d5b25486d062779 150 Pfam PF13801 Heavy-metal resistance 25 119 2.6E-13 T 18-10-2018 IPR025961 Heavy-metal resistance protein CH53_3465 12077ad220c0f0ab4d5b25486d062779 150 Gene3D G3DSA:1.20.120.1490 44 124 4.8E-29 T 18-10-2018 CH53_4326 97566cdd932acf4e106add216cfaee47 145 SMART SM00990 30 134 5.9E-11 T 18-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 CH53_4326 97566cdd932acf4e106add216cfaee47 145 Pfam PF08774 VRR-NUC domain 32 132 1.8E-14 T 18-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 CH53_4326 97566cdd932acf4e106add216cfaee47 145 Gene3D G3DSA:3.40.1350.10 26 145 7.1E-38 T 18-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 CH53_401 05c2edb41e16fac9f575d01b6eaab33f 265 Pfam PF00005 ABC transporter 29 189 1.0E-33 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_401 05c2edb41e16fac9f575d01b6eaab33f 265 SUPERFAMILY SSF52540 14 259 1.77E-73 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_401 05c2edb41e16fac9f575d01b6eaab33f 265 Gene3D G3DSA:3.40.50.300 8 264 4.6E-84 T 18-10-2018 CH53_401 05c2edb41e16fac9f575d01b6eaab33f 265 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_401 05c2edb41e16fac9f575d01b6eaab33f 265 SMART SM00382 38 237 1.6E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_401 05c2edb41e16fac9f575d01b6eaab33f 265 PIRSF PIRSF039085 10 265 3.4E-119 T 18-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CH53_3713 b25ce75e98bb8838e6bfcbb6f0f72197 317 Pfam PF03466 LysR substrate binding domain 94 297 1.6E-42 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_3713 b25ce75e98bb8838e6bfcbb6f0f72197 317 SUPERFAMILY SSF53850 94 304 5.07E-43 T 18-10-2018 CH53_3713 b25ce75e98bb8838e6bfcbb6f0f72197 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 1.9E-18 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_3713 b25ce75e98bb8838e6bfcbb6f0f72197 317 Gene3D G3DSA:1.10.10.10 9 95 4.8E-25 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3713 b25ce75e98bb8838e6bfcbb6f0f72197 317 Gene3D G3DSA:3.40.190.290 97 301 6.8E-63 T 18-10-2018 CH53_3713 b25ce75e98bb8838e6bfcbb6f0f72197 317 SUPERFAMILY SSF46785 11 94 4.27E-19 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3448 4aca1c4653b035a93aaf4b786724ab38 297 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 11 230 1.1E-80 T 18-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CH53_3448 4aca1c4653b035a93aaf4b786724ab38 297 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 8 290 7.6E-135 T 18-10-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 CH53_3448 4aca1c4653b035a93aaf4b786724ab38 297 SUPERFAMILY SSF51621 8 240 8.72E-62 T 18-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CH53_3448 4aca1c4653b035a93aaf4b786724ab38 297 PIRSF PIRSF015582 2 296 3.7E-77 T 18-10-2018 IPR011206 Citrate lyase beta subunit-like CH53_3448 4aca1c4653b035a93aaf4b786724ab38 297 Gene3D G3DSA:3.20.20.60 1 293 3.3E-89 T 18-10-2018 CH53_167 969921a799484311098c7ee7cf1d9f8c 1232 Gene3D G3DSA:3.30.980.40 742 846 4.4E-34 T 18-10-2018 CH53_167 969921a799484311098c7ee7cf1d9f8c 1232 Gene3D G3DSA:1.10.10.10 1169 1232 4.4E-29 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_167 969921a799484311098c7ee7cf1d9f8c 1232 Pfam PF01580 FtsK/SpoIIIE family 850 1063 4.4E-73 T 18-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CH53_167 969921a799484311098c7ee7cf1d9f8c 1232 SUPERFAMILY SSF52540 824 1136 7.7E-53 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_167 969921a799484311098c7ee7cf1d9f8c 1232 Pfam PF09397 Ftsk gamma domain 1167 1227 1.4E-26 T 18-10-2018 IPR018541 FtsK gamma domain CH53_167 969921a799484311098c7ee7cf1d9f8c 1232 SUPERFAMILY SSF46785 1165 1230 2.86E-21 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_167 969921a799484311098c7ee7cf1d9f8c 1232 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 3.4E-43 T 18-10-2018 IPR025199 DNA translocase FtsK, 4TM region CH53_167 969921a799484311098c7ee7cf1d9f8c 1232 SMART SM00843 1165 1230 1.5E-40 T 18-10-2018 IPR018541 FtsK gamma domain CH53_167 969921a799484311098c7ee7cf1d9f8c 1232 Gene3D G3DSA:3.40.50.300 847 1149 6.7E-124 T 18-10-2018 CH53_4362 f4e46e8c1f7acd5b2717e847323e67c8 569 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 213 3.0E-17 T 18-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CH53_4362 f4e46e8c1f7acd5b2717e847323e67c8 569 Gene3D G3DSA:3.40.710.10 289 469 5.0E-102 T 18-10-2018 CH53_4362 f4e46e8c1f7acd5b2717e847323e67c8 569 SUPERFAMILY SSF56601 228 556 3.76E-84 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CH53_4362 f4e46e8c1f7acd5b2717e847323e67c8 569 Gene3D G3DSA:3.30.450.330 230 543 5.0E-102 T 18-10-2018 CH53_4362 f4e46e8c1f7acd5b2717e847323e67c8 569 Pfam PF00905 Penicillin binding protein transpeptidase domain 253 547 2.6E-77 T 18-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CH53_4362 f4e46e8c1f7acd5b2717e847323e67c8 569 SUPERFAMILY SSF56519 56 227 3.14E-46 T 18-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 CH53_4362 f4e46e8c1f7acd5b2717e847323e67c8 569 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 12 563 44.49 T 18-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CH53_4362 f4e46e8c1f7acd5b2717e847323e67c8 569 Gene3D G3DSA:3.90.1310.30 52 228 3.0E-44 T 18-10-2018 CH53_1610 5b179ce7d713997ebda9ece407745e2c 252 Pfam PF04445 Putative SAM-dependent methyltransferase 22 249 4.2E-108 T 18-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CH53_1610 5b179ce7d713997ebda9ece407745e2c 252 SUPERFAMILY SSF53335 10 249 3.43E-74 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_1610 5b179ce7d713997ebda9ece407745e2c 252 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 6 251 38.424 T 18-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CH53_1610 5b179ce7d713997ebda9ece407745e2c 252 Gene3D G3DSA:3.40.1630.10 4 59 1.0E-29 T 18-10-2018 CH53_1610 5b179ce7d713997ebda9ece407745e2c 252 Gene3D G3DSA:3.40.50.150 60 251 9.5E-74 T 18-10-2018 CH53_339 6999f71bc9e824621c40cdc3ac7c7d2c 890 Gene3D G3DSA:3.90.199.10 33 521 8.9E-235 T 18-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CH53_339 6999f71bc9e824621c40cdc3ac7c7d2c 890 SMART SM00434 11 499 5.4E-299 T 18-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CH53_339 6999f71bc9e824621c40cdc3ac7c7d2c 890 Gene3D G3DSA:2.120.10.90 535 841 4.3E-132 T 18-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CH53_339 6999f71bc9e824621c40cdc3ac7c7d2c 890 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 841 24.768 T 18-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CH53_339 6999f71bc9e824621c40cdc3ac7c7d2c 890 SUPERFAMILY SSF56719 30 521 9.02E-183 T 18-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CH53_339 6999f71bc9e824621c40cdc3ac7c7d2c 890 Gene3D G3DSA:1.10.268.10 370 493 8.9E-235 T 18-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CH53_339 6999f71bc9e824621c40cdc3ac7c7d2c 890 Gene3D G3DSA:3.30.1360.40 236 333 8.9E-235 T 18-10-2018 CH53_339 6999f71bc9e824621c40cdc3ac7c7d2c 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 3.7E-13 T 18-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CH53_339 6999f71bc9e824621c40cdc3ac7c7d2c 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 743 789 8.0E-15 T 18-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CH53_339 6999f71bc9e824621c40cdc3ac7c7d2c 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 9.3E-10 T 18-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CH53_339 6999f71bc9e824621c40cdc3ac7c7d2c 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 1.2E-8 T 18-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CH53_339 6999f71bc9e824621c40cdc3ac7c7d2c 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 5.8E-11 T 18-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CH53_339 6999f71bc9e824621c40cdc3ac7c7d2c 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 737 1.7E-15 T 18-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CH53_339 6999f71bc9e824621c40cdc3ac7c7d2c 890 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 2.8E-152 T 18-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CH53_339 6999f71bc9e824621c40cdc3ac7c7d2c 890 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 18-10-2018 CH53_339 6999f71bc9e824621c40cdc3ac7c7d2c 890 SUPERFAMILY SSF101904 533 848 8.76E-115 T 18-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CH53_2847 84cf076c3dec8f4b5e76b7b08e23a7f9 198 Pfam PF01965 DJ-1/PfpI family 4 169 8.3E-47 T 18-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CH53_2847 84cf076c3dec8f4b5e76b7b08e23a7f9 198 Gene3D G3DSA:3.40.50.880 1 196 2.2E-56 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_2847 84cf076c3dec8f4b5e76b7b08e23a7f9 198 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 182 6.3E-66 T 18-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 CH53_2847 84cf076c3dec8f4b5e76b7b08e23a7f9 198 SUPERFAMILY SSF52317 5 189 9.72E-49 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_2214 1fa82afb196caf41f280bbdcd1011451 88 Pfam PF01337 Barstar (barnase inhibitor) 6 79 2.2E-10 T 18-10-2018 IPR000468 Barstar (barnase inhibitor) CH53_2214 1fa82afb196caf41f280bbdcd1011451 88 Gene3D G3DSA:3.30.370.10 1 88 3.3E-35 T 18-10-2018 IPR035905 Barstar-like superfamily CH53_2214 1fa82afb196caf41f280bbdcd1011451 88 SUPERFAMILY SSF52038 1 87 3.92E-28 T 18-10-2018 IPR035905 Barstar-like superfamily CH53_2890 12552de36a1fbfa83cadea0d6db949ad 395 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 377 1.4E-78 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CH53_2890 12552de36a1fbfa83cadea0d6db949ad 395 Gene3D G3DSA:1.10.287.470 100 173 9.3E-112 T 18-10-2018 CH53_2890 12552de36a1fbfa83cadea0d6db949ad 395 Pfam PF00529 HlyD membrane-fusion protein of T1SS 295 361 7.5E-13 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CH53_2890 12552de36a1fbfa83cadea0d6db949ad 395 Gene3D G3DSA:2.40.50.100 65 209 9.3E-112 T 18-10-2018 CH53_2890 12552de36a1fbfa83cadea0d6db949ad 395 Gene3D G3DSA:2.40.420.20 305 374 9.3E-112 T 18-10-2018 CH53_2890 12552de36a1fbfa83cadea0d6db949ad 395 Gene3D G3DSA:2.40.30.170 53 304 9.3E-112 T 18-10-2018 CH53_2890 12552de36a1fbfa83cadea0d6db949ad 395 SUPERFAMILY SSF111369 53 301 1.23E-87 T 18-10-2018 CH53_2890 12552de36a1fbfa83cadea0d6db949ad 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 294 1.3E-9 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH53_3669 fc78f7a0e16428f6bc1cc849419fca1a 191 Pfam PF00419 Fimbrial protein 63 190 1.6E-9 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_3669 fc78f7a0e16428f6bc1cc849419fca1a 191 SUPERFAMILY SSF49401 64 190 1.14E-14 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_3669 fc78f7a0e16428f6bc1cc849419fca1a 191 Gene3D G3DSA:2.60.40.1090 65 190 5.4E-18 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_4365 8b420e1793753f1f37b9d12c1eff9050 203 SUPERFAMILY SSF56925 45 203 4.32E-78 T 18-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CH53_4365 8b420e1793753f1f37b9d12c1eff9050 203 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 1 203 40.965 T 18-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP CH53_4365 8b420e1793753f1f37b9d12c1eff9050 203 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 55 191 3.0E-60 T 18-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP CH53_4365 8b420e1793753f1f37b9d12c1eff9050 203 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 57 200 1.6E-68 T 18-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP CH53_4365 8b420e1793753f1f37b9d12c1eff9050 203 Gene3D G3DSA:2.40.160.20 44 203 8.8E-71 T 18-10-2018 CH53_4356 a6a9d8950d55bc88dfd95d9b9b4bfe06 153 PIRSF PIRSF020687 1 152 8.2E-72 T 18-10-2018 IPR009328 Protein of unknown function DUF986 CH53_4356 a6a9d8950d55bc88dfd95d9b9b4bfe06 153 Pfam PF06173 Protein of unknown function (DUF986) 4 151 5.6E-66 T 18-10-2018 IPR009328 Protein of unknown function DUF986 CH53_4356 a6a9d8950d55bc88dfd95d9b9b4bfe06 153 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 22 144 7.0E-63 T 18-10-2018 IPR009328 Protein of unknown function DUF986 CH53_4356 a6a9d8950d55bc88dfd95d9b9b4bfe06 153 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 32.609 T 18-10-2018 IPR009328 Protein of unknown function DUF986 CH53_3651 dd528ed7f4a82432ad18db0a9c126e55 133 Pfam PF15599 Immunity protein 63 47 125 6.3E-13 T 18-10-2018 IPR028952 Immunity protein 63 CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 SUPERFAMILY SSF48029 113 323 5.75E-63 T 18-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 SUPERFAMILY SSF48029 4 103 3.01E-21 T 18-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 Pfam PF01706 FliG C-terminal domain 216 322 1.8E-36 T 18-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 Gene3D G3DSA:1.10.220.30 88 190 1.9E-26 T 18-10-2018 CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 Pfam PF14841 FliG middle domain 114 186 7.0E-25 T 18-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 Pfam PF14842 FliG N-terminal domain 3 102 2.2E-31 T 18-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 1.8E-73 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 1.8E-73 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 1.8E-73 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 1.8E-73 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 1.8E-73 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 1.8E-73 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 1.8E-73 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 Gene3D G3DSA:1.10.220.30 1 79 4.0E-20 T 18-10-2018 CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 PIRSF PIRSF003161 1 330 6.6E-117 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 Gene3D G3DSA:1.10.220.30 193 329 4.7E-41 T 18-10-2018 CH53_3573 97909f1527e78b3e6ec833c4887a81cd 330 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 330 2.5E-139 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CH53_2989 91871fbcf6e47b713babb5b7fb4abe31 473 Gene3D G3DSA:1.20.1250.20 7 432 3.8E-15 T 18-10-2018 CH53_2989 91871fbcf6e47b713babb5b7fb4abe31 473 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 59 84 - T 18-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 CH53_2989 91871fbcf6e47b713babb5b7fb4abe31 473 Pfam PF13347 MFS/sugar transport protein 10 435 1.6E-91 T 18-10-2018 CH53_2989 91871fbcf6e47b713babb5b7fb4abe31 473 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 8 449 1.3E-169 T 18-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CH53_2989 91871fbcf6e47b713babb5b7fb4abe31 473 SUPERFAMILY SSF103473 9 436 4.19E-31 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_395 fedb5832a1d06cc9b17f15a0cb445d53 95 SUPERFAMILY SSF52794 1 86 4.97E-19 T 18-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CH53_395 fedb5832a1d06cc9b17f15a0cb445d53 95 Gene3D G3DSA:3.40.50.2300 1 90 2.4E-19 T 18-10-2018 CH53_395 fedb5832a1d06cc9b17f15a0cb445d53 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 85 1.6E-11 T 18-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CH53_1567 aa75d6fc81e4526af6f922d5c44e3dae 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 3.7E-100 T 18-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CH53_1567 aa75d6fc81e4526af6f922d5c44e3dae 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 3.0E-27 T 18-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CH53_1567 aa75d6fc81e4526af6f922d5c44e3dae 191 Gene3D G3DSA:3.30.300.130 105 191 1.3E-20 T 18-10-2018 IPR034904 Fe-S cluster assembly domain superfamily CH53_1567 aa75d6fc81e4526af6f922d5c44e3dae 191 Pfam PF01106 NifU-like domain 111 177 5.5E-20 T 18-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CH53_1567 aa75d6fc81e4526af6f922d5c44e3dae 191 Gene3D G3DSA:2.60.300.12 1 98 2.3E-14 T 18-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CH53_1567 aa75d6fc81e4526af6f922d5c44e3dae 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 45.609 T 18-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CH53_1567 aa75d6fc81e4526af6f922d5c44e3dae 191 SUPERFAMILY SSF89360 1 97 6.28E-22 T 18-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CH53_1567 aa75d6fc81e4526af6f922d5c44e3dae 191 SUPERFAMILY SSF117916 95 184 1.42E-23 T 18-10-2018 IPR034904 Fe-S cluster assembly domain superfamily CH53_1567 aa75d6fc81e4526af6f922d5c44e3dae 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 5.3E-14 T 18-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CH53_1881 a38c018fd7d2ffbe8ba89c0b3b72cc76 232 SUPERFAMILY SSF52172 1 188 6.12E-42 T 18-10-2018 IPR011006 CheY-like superfamily CH53_1881 a38c018fd7d2ffbe8ba89c0b3b72cc76 232 Gene3D G3DSA:3.40.50.2300 1 129 9.9E-43 T 18-10-2018 CH53_1881 a38c018fd7d2ffbe8ba89c0b3b72cc76 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 4.6E-21 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_1881 a38c018fd7d2ffbe8ba89c0b3b72cc76 232 SMART SM00448 2 111 3.1E-47 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1881 a38c018fd7d2ffbe8ba89c0b3b72cc76 232 Gene3D G3DSA:1.10.10.10 130 232 1.2E-28 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1881 a38c018fd7d2ffbe8ba89c0b3b72cc76 232 Pfam PF00072 Response regulator receiver domain 4 112 4.4E-31 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1881 a38c018fd7d2ffbe8ba89c0b3b72cc76 232 SMART SM00862 152 228 1.0E-21 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_1998 1d9d652bcf7fd9a45afd21d570a55b94 303 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 95 8.7E-22 T 18-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CH53_1998 1d9d652bcf7fd9a45afd21d570a55b94 303 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 13 300 3.6E-108 T 18-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 CH53_1998 1d9d652bcf7fd9a45afd21d570a55b94 303 Gene3D G3DSA:1.10.150.130 9 103 1.1E-19 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal CH53_1998 1d9d652bcf7fd9a45afd21d570a55b94 303 SUPERFAMILY SSF47823 10 102 5.89E-11 T 18-10-2018 CH53_1998 1d9d652bcf7fd9a45afd21d570a55b94 303 Pfam PF00589 Phage integrase family 117 284 9.0E-51 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CH53_1998 1d9d652bcf7fd9a45afd21d570a55b94 303 Gene3D G3DSA:1.10.443.10 116 292 9.2E-58 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CH53_1998 1d9d652bcf7fd9a45afd21d570a55b94 303 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 298 56.954 T 18-10-2018 IPR023009 Tyrosine recombinase XerC/XerD CH53_1998 1d9d652bcf7fd9a45afd21d570a55b94 303 SUPERFAMILY SSF56349 113 296 2.27E-53 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CH53_3434 abff020ecb7e6c3c1f14dd9732fe4f0d 176 Pfam PF00419 Fimbrial protein 26 175 1.1E-11 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_3434 abff020ecb7e6c3c1f14dd9732fe4f0d 176 SUPERFAMILY SSF49401 25 175 1.49E-26 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_3434 abff020ecb7e6c3c1f14dd9732fe4f0d 176 Gene3D G3DSA:2.60.40.1090 22 176 1.6E-26 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_3148 9b4ec88628bc5b9698f57fb2c8ed7648 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 1.7E-109 T 18-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CH53_3148 9b4ec88628bc5b9698f57fb2c8ed7648 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 1.4E-190 T 18-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CH53_3148 9b4ec88628bc5b9698f57fb2c8ed7648 379 PIRSF PIRSF000267 2 378 9.0E-130 T 18-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CH53_163 8335aff9979dd7707bd8a174c4c2079d 382 SUPERFAMILY SSF103473 6 371 1.83E-43 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_163 8335aff9979dd7707bd8a174c4c2079d 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 36.092 T 18-10-2018 IPR023745 MSF-type transporter, YcaD CH53_163 8335aff9979dd7707bd8a174c4c2079d 382 Pfam PF00083 Sugar (and other) transporter 39 180 3.8E-5 T 18-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CH53_163 8335aff9979dd7707bd8a174c4c2079d 382 Gene3D G3DSA:1.20.1250.20 200 378 2.8E-19 T 18-10-2018 CH53_163 8335aff9979dd7707bd8a174c4c2079d 382 Pfam PF07690 Major Facilitator Superfamily 210 372 2.0E-12 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_163 8335aff9979dd7707bd8a174c4c2079d 382 Gene3D G3DSA:1.20.1250.20 7 199 6.6E-21 T 18-10-2018 CH53_1692 3e0ac4fdd7b771c9fd43bc7762d6f9e7 387 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 40.718 T 18-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CH53_1692 3e0ac4fdd7b771c9fd43bc7762d6f9e7 387 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 1.1E-24 T 18-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CH53_1692 3e0ac4fdd7b771c9fd43bc7762d6f9e7 387 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 1.3E-16 T 18-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CH53_1692 3e0ac4fdd7b771c9fd43bc7762d6f9e7 387 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 1.3E-16 T 18-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CH53_1692 3e0ac4fdd7b771c9fd43bc7762d6f9e7 387 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 1.3E-16 T 18-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CH53_1692 3e0ac4fdd7b771c9fd43bc7762d6f9e7 387 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 1.3E-16 T 18-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CH53_1692 3e0ac4fdd7b771c9fd43bc7762d6f9e7 387 Gene3D G3DSA:1.10.1040.10 207 382 1.7E-70 T 18-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CH53_1692 3e0ac4fdd7b771c9fd43bc7762d6f9e7 387 SUPERFAMILY SSF48179 204 384 1.33E-46 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_1692 3e0ac4fdd7b771c9fd43bc7762d6f9e7 387 SUPERFAMILY SSF51735 1 203 2.42E-47 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1692 3e0ac4fdd7b771c9fd43bc7762d6f9e7 387 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 18-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CH53_1692 3e0ac4fdd7b771c9fd43bc7762d6f9e7 387 Gene3D G3DSA:3.40.50.720 1 205 5.6E-83 T 18-10-2018 CH53_1692 3e0ac4fdd7b771c9fd43bc7762d6f9e7 387 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 148 372 7.3E-67 T 18-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CH53_1410 50e82cc4e04178caa96364b6de4fbead 318 Gene3D G3DSA:2.30.330.10 232 316 2.2E-14 T 18-10-2018 IPR036429 SpoA-like superfamily CH53_1410 50e82cc4e04178caa96364b6de4fbead 318 SUPERFAMILY SSF101801 244 312 1.12E-11 T 18-10-2018 IPR036429 SpoA-like superfamily CH53_1410 50e82cc4e04178caa96364b6de4fbead 318 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 244 312 3.5E-11 T 18-10-2018 IPR001543 Surface presentation of antigen (SpoA) CH53_1410 50e82cc4e04178caa96364b6de4fbead 318 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 31 312 2.2E-49 T 18-10-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 CH53_1344 b8119fe510072c8d76b6daad81859f74 333 Pfam PF13484 4Fe-4S double cluster binding domain 146 210 3.9E-19 T 18-10-2018 CH53_1344 b8119fe510072c8d76b6daad81859f74 333 Pfam PF08331 Domain of unknown function (DUF1730) 11 94 3.1E-22 T 18-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 CH53_1344 b8119fe510072c8d76b6daad81859f74 333 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 1 302 1.5E-133 T 18-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CH53_1344 b8119fe510072c8d76b6daad81859f74 333 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_1344 b8119fe510072c8d76b6daad81859f74 333 SUPERFAMILY SSF46548 93 210 4.03E-20 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CH53_1601 05a426770781bacf9e83ae632f1d37d7 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 8.6E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1601 05a426770781bacf9e83ae632f1d37d7 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 8.6E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1601 05a426770781bacf9e83ae632f1d37d7 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 8.6E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1601 05a426770781bacf9e83ae632f1d37d7 319 SUPERFAMILY SSF53850 95 304 1.35E-40 T 18-10-2018 CH53_1601 05a426770781bacf9e83ae632f1d37d7 319 Gene3D G3DSA:3.40.190.290 101 300 1.5E-52 T 18-10-2018 CH53_1601 05a426770781bacf9e83ae632f1d37d7 319 Gene3D G3DSA:1.10.10.10 11 100 1.4E-25 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1601 05a426770781bacf9e83ae632f1d37d7 319 SUPERFAMILY SSF46785 12 119 1.14E-21 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1601 05a426770781bacf9e83ae632f1d37d7 319 Pfam PF03466 LysR substrate binding domain 96 300 4.1E-37 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_1601 05a426770781bacf9e83ae632f1d37d7 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 3.7E-20 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1213 876b2d92ca600db1cc657b0dbaa8e735 295 Gene3D G3DSA:3.40.50.300 16 189 5.0E-20 T 18-10-2018 CH53_1213 876b2d92ca600db1cc657b0dbaa8e735 295 Pfam PF13481 AAA domain 59 130 5.0E-17 T 18-10-2018 CH53_3996 888c62df7e15408fc15df0869089427a 252 Gene3D G3DSA:3.75.10.10 1 252 1.5E-59 T 18-10-2018 CH53_3996 888c62df7e15408fc15df0869089427a 252 Pfam PF02274 Amidinotransferase 57 249 3.4E-10 T 18-10-2018 CH53_3996 888c62df7e15408fc15df0869089427a 252 SUPERFAMILY SSF55909 6 251 2.4E-46 T 18-10-2018 CH53_416 7bc922dc0adf095c0681149307718fb4 294 Pfam PF00892 EamA-like transporter family 150 280 1.4E-20 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_416 7bc922dc0adf095c0681149307718fb4 294 Pfam PF00892 EamA-like transporter family 4 135 5.6E-18 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_416 7bc922dc0adf095c0681149307718fb4 294 SUPERFAMILY SSF103481 187 283 2.88E-14 T 18-10-2018 CH53_416 7bc922dc0adf095c0681149307718fb4 294 SUPERFAMILY SSF103481 42 138 1.96E-10 T 18-10-2018 CH53_763 7573d9ab7cfadb6551414bfb86eb8820 254 SMART SM00479 7 184 5.3E-53 T 18-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CH53_763 7573d9ab7cfadb6551414bfb86eb8820 254 Gene3D G3DSA:3.20.20.140 208 254 6.4E-7 T 18-10-2018 CH53_763 7573d9ab7cfadb6551414bfb86eb8820 254 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 2.0E-92 T 18-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_763 7573d9ab7cfadb6551414bfb86eb8820 254 Pfam PF00929 Exonuclease 9 175 1.3E-40 T 18-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CH53_763 7573d9ab7cfadb6551414bfb86eb8820 254 SUPERFAMILY SSF53098 4 185 8.98E-55 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_763 7573d9ab7cfadb6551414bfb86eb8820 254 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 5.6E-87 T 18-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_763 7573d9ab7cfadb6551414bfb86eb8820 254 Gene3D G3DSA:3.30.420.10 2 190 2.9E-60 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CH53_298 d06ac73fb15f668657f9b1abfd83becb 80 SUPERFAMILY SSF54857 1 78 1.12E-23 T 18-10-2018 IPR036687 DinI-like superfamily CH53_298 d06ac73fb15f668657f9b1abfd83becb 80 Gene3D G3DSA:3.30.910.10 1 79 1.4E-17 T 18-10-2018 IPR036687 DinI-like superfamily CH53_298 d06ac73fb15f668657f9b1abfd83becb 80 Pfam PF06183 DinI-like family 17 76 3.6E-23 T 18-10-2018 IPR010391 DNA damage-inducible protein DinI-like CH53_2457 e2e1be5edf07544fd7d9a2a2fb7fc1c0 204 SUPERFAMILY SSF46894 137 198 4.08E-11 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_2457 e2e1be5edf07544fd7d9a2a2fb7fc1c0 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 7.7E-5 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2457 e2e1be5edf07544fd7d9a2a2fb7fc1c0 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 7.7E-5 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2457 e2e1be5edf07544fd7d9a2a2fb7fc1c0 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 7.7E-5 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2457 e2e1be5edf07544fd7d9a2a2fb7fc1c0 204 Gene3D G3DSA:1.10.10.10 104 201 2.1E-9 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2457 e2e1be5edf07544fd7d9a2a2fb7fc1c0 204 SMART SM00421 140 197 2.3E-4 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2457 e2e1be5edf07544fd7d9a2a2fb7fc1c0 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 196 1.4E-10 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2393 fdcd1f479d42c73627eb56e2fc14fb1f 119 Pfam PF11604 Copper binding periplasmic protein CusF 52 115 4.6E-18 T 18-10-2018 IPR021647 Copper binding periplasmic protein CusF CH53_2393 fdcd1f479d42c73627eb56e2fc14fb1f 119 Gene3D G3DSA:2.40.50.320 45 119 1.3E-21 T 18-10-2018 CH53_137 f45f78da6a37e24f6d4ff0c7a101ea81 625 SUPERFAMILY SSF141523 385 543 1.16E-18 T 18-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CH53_137 f45f78da6a37e24f6d4ff0c7a101ea81 625 Pfam PF03734 L,D-transpeptidase catalytic domain 384 553 1.9E-29 T 18-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CH53_137 f45f78da6a37e24f6d4ff0c7a101ea81 625 SUPERFAMILY SSF47090 322 365 7.14E-11 T 18-10-2018 IPR036365 PGBD-like superfamily CH53_137 f45f78da6a37e24f6d4ff0c7a101ea81 625 Pfam PF01471 Putative peptidoglycan binding domain 323 357 3.7E-7 T 18-10-2018 IPR002477 Peptidoglycan binding-like CH53_1631 c92afb1654d95bc00a131a6703801a5f 667 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 245 402 6.4E-12 T 18-10-2018 IPR000160 GGDEF domain CH53_1631 c92afb1654d95bc00a131a6703801a5f 667 SMART SM00267 233 403 2.0E-18 T 18-10-2018 IPR000160 GGDEF domain CH53_1631 c92afb1654d95bc00a131a6703801a5f 667 Pfam PF00990 Diguanylate cyclase, GGDEF domain 247 399 8.3E-21 T 18-10-2018 IPR000160 GGDEF domain CH53_1631 c92afb1654d95bc00a131a6703801a5f 667 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 36 155 9.1E-58 T 18-10-2018 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 CH53_1631 c92afb1654d95bc00a131a6703801a5f 667 Gene3D G3DSA:1.20.1480.50 146 239 1.6E-5 T 18-10-2018 CH53_1631 c92afb1654d95bc00a131a6703801a5f 667 Pfam PF00563 EAL domain 419 653 2.8E-62 T 18-10-2018 IPR001633 EAL domain CH53_1631 c92afb1654d95bc00a131a6703801a5f 667 SUPERFAMILY SSF55073 249 405 3.84E-25 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_1631 c92afb1654d95bc00a131a6703801a5f 667 Gene3D G3DSA:3.30.70.270 240 416 1.3E-28 T 18-10-2018 CH53_1631 c92afb1654d95bc00a131a6703801a5f 667 Gene3D G3DSA:3.20.20.450 417 664 2.3E-82 T 18-10-2018 IPR035919 EAL domain superfamily CH53_1631 c92afb1654d95bc00a131a6703801a5f 667 SMART SM00052 413 658 4.7E-99 T 18-10-2018 IPR001633 EAL domain CH53_1631 c92afb1654d95bc00a131a6703801a5f 667 SUPERFAMILY SSF141868 418 662 1.83E-75 T 18-10-2018 IPR035919 EAL domain superfamily CH53_764 f40ff3eb0fd6bf8965e6992e362ebe8c 154 Gene3D G3DSA:3.30.420.10 1 154 7.5E-60 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CH53_764 f40ff3eb0fd6bf8965e6992e362ebe8c 154 Pfam PF00075 RNase H 3 141 2.0E-53 T 18-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CH53_764 f40ff3eb0fd6bf8965e6992e362ebe8c 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 37.577 T 18-10-2018 IPR022892 Ribonuclease HI GO:0004523 CH53_764 f40ff3eb0fd6bf8965e6992e362ebe8c 154 SUPERFAMILY SSF53098 3 143 3.54E-58 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_631 642f1fc9a69122d0358bc71c393bddb4 249 SMART SM00028 67 100 6.8 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_631 642f1fc9a69122d0358bc71c393bddb4 249 SMART SM00028 33 66 0.0033 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_631 642f1fc9a69122d0358bc71c393bddb4 249 SMART SM00028 137 170 1.5 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_631 642f1fc9a69122d0358bc71c393bddb4 249 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 236 2.5E-80 T 18-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW CH53_631 642f1fc9a69122d0358bc71c393bddb4 249 SUPERFAMILY SSF48452 140 246 1.52E-5 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_631 642f1fc9a69122d0358bc71c393bddb4 249 Pfam PF13181 Tetratricopeptide repeat 36 66 4.2E-5 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_631 642f1fc9a69122d0358bc71c393bddb4 249 Gene3D G3DSA:1.25.40.10 32 247 7.6E-40 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_631 642f1fc9a69122d0358bc71c393bddb4 249 SUPERFAMILY SSF48452 29 175 1.22E-17 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1655 7abb819d3ed5cb8a3caeab171e28bd53 472 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 18-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CH53_1655 7abb819d3ed5cb8a3caeab171e28bd53 472 Pfam PF00324 Amino acid permease 16 456 8.1E-112 T 18-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CH53_1655 7abb819d3ed5cb8a3caeab171e28bd53 472 Gene3D G3DSA:1.20.1740.10 7 467 3.3E-69 T 18-10-2018 CH53_1655 7abb819d3ed5cb8a3caeab171e28bd53 472 PIRSF PIRSF006060 2 465 1.7E-76 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_1627 b06c6c751010da42aa4e9c723471752d 389 SUPERFAMILY SSF49401 220 388 2.09E-12 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_1627 b06c6c751010da42aa4e9c723471752d 389 Gene3D G3DSA:2.60.40.1090 222 388 3.2E-23 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_1627 b06c6c751010da42aa4e9c723471752d 389 Gene3D G3DSA:2.60.40.3310 30 221 2.6E-14 T 18-10-2018 CH53_1630 1377f1077ce202f76e8282907ac29c3d 180 Pfam PF16970 Type-1 fimbrial protein, A 54 180 5.1E-16 T 18-10-2018 IPR039458 Type-1 fimbrial protein, A CH53_1630 1377f1077ce202f76e8282907ac29c3d 180 Gene3D G3DSA:2.60.40.1090 27 179 2.0E-27 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_1630 1377f1077ce202f76e8282907ac29c3d 180 SUPERFAMILY SSF49401 27 180 9.94E-24 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_3379 3614800ce8fac3a71e1685be3dd66f20 351 Pfam PF11760 Cobalamin synthesis G N-terminal 54 134 2.6E-34 T 18-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 CH53_3379 3614800ce8fac3a71e1685be3dd66f20 351 Gene3D G3DSA:3.40.50.11220 7 129 5.0E-30 T 18-10-2018 CH53_3379 3614800ce8fac3a71e1685be3dd66f20 351 SUPERFAMILY SSF159672 6 238 3.4E-58 T 18-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 CH53_3379 3614800ce8fac3a71e1685be3dd66f20 351 Pfam PF11761 Cobalamin biosynthesis central region 140 216 3.5E-8 T 18-10-2018 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 CH53_3379 3614800ce8fac3a71e1685be3dd66f20 351 Pfam PF01890 Cobalamin synthesis G C-terminus 231 346 2.2E-23 T 18-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CH53_3379 3614800ce8fac3a71e1685be3dd66f20 351 SUPERFAMILY SSF159664 224 349 1.09E-31 T 18-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 CH53_3379 3614800ce8fac3a71e1685be3dd66f20 351 Gene3D G3DSA:3.30.420.180 222 350 3.4E-30 T 18-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 CH53_2425 6284fb30dcec4586f08ed0c5243bb906 175 Pfam PF00857 Isochorismatase family 6 140 2.0E-26 T 18-10-2018 IPR000868 Isochorismatase-like GO:0003824 CH53_2425 6284fb30dcec4586f08ed0c5243bb906 175 Gene3D G3DSA:3.40.50.850 2 155 2.7E-34 T 18-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CH53_2425 6284fb30dcec4586f08ed0c5243bb906 175 SUPERFAMILY SSF52499 6 156 3.53E-36 T 18-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CH53_3073 cf8a7823bad38c72025ee2cdeedc063c 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3073 cf8a7823bad38c72025ee2cdeedc063c 241 SUPERFAMILY SSF52540 1 235 4.06E-77 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3073 cf8a7823bad38c72025ee2cdeedc063c 241 PIRSF PIRSF039085 1 241 1.9E-105 T 18-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CH53_3073 cf8a7823bad38c72025ee2cdeedc063c 241 Pfam PF00005 ABC transporter 18 165 9.6E-34 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3073 cf8a7823bad38c72025ee2cdeedc063c 241 Gene3D G3DSA:3.40.50.300 1 240 2.6E-76 T 18-10-2018 CH53_3073 cf8a7823bad38c72025ee2cdeedc063c 241 SMART SM00382 26 213 5.9E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2167 5bfaa3867229b39d3b4d501098ee747f 549 Pfam PF00999 Sodium/hydrogen exchanger family 8 421 5.4E-79 T 18-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CH53_2167 5bfaa3867229b39d3b4d501098ee747f 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 1.8E-208 T 18-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 CH53_2554 3b6db7673d3932697f4e10d4a707e5d8 1277 Pfam PF14331 ImcF-related N-terminal domain 253 533 5.7E-72 T 18-10-2018 IPR025743 ImcF-related, N-terminal domain CH53_2554 3b6db7673d3932697f4e10d4a707e5d8 1277 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 73 1267 3.0E-245 T 18-10-2018 IPR017731 Type VI secretion system, IcmF CH53_2554 3b6db7673d3932697f4e10d4a707e5d8 1277 SUPERFAMILY SSF52540 182 383 8.52E-9 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2554 3b6db7673d3932697f4e10d4a707e5d8 1277 Gene3D G3DSA:3.40.50.300 177 377 1.1E-5 T 18-10-2018 CH53_2554 3b6db7673d3932697f4e10d4a707e5d8 1277 Pfam PF06744 Type VI secretion protein IcmF C-terminal 1024 1215 3.8E-44 T 18-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal CH53_2554 3b6db7673d3932697f4e10d4a707e5d8 1277 Pfam PF06761 Intracellular multiplication and human macrophage-killing 585 897 2.3E-68 T 18-10-2018 IPR009612 ImcF-related CH53_1737 0c2367661a873cc9d58f993e1a66d786 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 2.9E-107 T 18-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CH53_1737 0c2367661a873cc9d58f993e1a66d786 399 Gene3D G3DSA:3.40.50.720 1 399 5.4E-184 T 18-10-2018 CH53_1737 0c2367661a873cc9d58f993e1a66d786 399 Pfam PF07055 Enoyl reductase FAD binding domain 324 387 9.7E-28 T 18-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CH53_1737 0c2367661a873cc9d58f993e1a66d786 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 393 54.076 T 18-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CH53_1737 0c2367661a873cc9d58f993e1a66d786 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 4.6E-38 T 18-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CH53_2825 97fe59f9b14d6ad97d491ba5e20d368b 463 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 18-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CH53_2825 97fe59f9b14d6ad97d491ba5e20d368b 463 Pfam PF00324 Amino acid permease 17 455 6.7E-111 T 18-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CH53_2825 97fe59f9b14d6ad97d491ba5e20d368b 463 PIRSF PIRSF006060 4 463 8.0E-73 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_2825 97fe59f9b14d6ad97d491ba5e20d368b 463 Gene3D G3DSA:1.20.1740.10 7 462 9.0E-63 T 18-10-2018 CH53_1818 91888e544d417e9b68b103f498f01c8a 83 SUPERFAMILY SSF47413 2 68 1.97E-27 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_1818 91888e544d417e9b68b103f498f01c8a 83 Pfam PF13693 Winged helix-turn-helix DNA-binding 4 76 3.0E-32 T 18-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain CH53_1818 91888e544d417e9b68b103f498f01c8a 83 Gene3D G3DSA:1.10.260.40 1 68 5.8E-32 T 18-10-2018 CH53_178 31c884ab59a61403ce9c4aaa859b8d32 649 SMART SM00382 33 220 1.8E-15 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_178 31c884ab59a61403ce9c4aaa859b8d32 649 Pfam PF00005 ABC transporter 24 172 6.5E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_178 31c884ab59a61403ce9c4aaa859b8d32 649 Pfam PF12704 MacB-like periplasmic core domain 273 491 5.0E-40 T 18-10-2018 IPR025857 MacB-like periplasmic core domain CH53_178 31c884ab59a61403ce9c4aaa859b8d32 649 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_178 31c884ab59a61403ce9c4aaa859b8d32 649 Pfam PF02687 FtsX-like permease family 554 642 3.2E-11 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CH53_178 31c884ab59a61403ce9c4aaa859b8d32 649 SUPERFAMILY SSF52540 4 229 1.46E-68 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_178 31c884ab59a61403ce9c4aaa859b8d32 649 Gene3D G3DSA:3.40.50.300 1 275 5.5E-70 T 18-10-2018 CH53_2872 351dba26f9bce4b6898d666e5c5f326b 153 SUPERFAMILY SSF54909 62 151 1.88E-21 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_2872 351dba26f9bce4b6898d666e5c5f326b 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 1.1E-16 T 18-10-2018 CH53_2872 351dba26f9bce4b6898d666e5c5f326b 153 SUPERFAMILY SSF46785 2 92 1.26E-16 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2872 351dba26f9bce4b6898d666e5c5f326b 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 1.6E-21 T 18-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CH53_2872 351dba26f9bce4b6898d666e5c5f326b 153 Gene3D G3DSA:1.10.10.10 3 54 8.6E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2872 351dba26f9bce4b6898d666e5c5f326b 153 SMART SM00344 2 111 7.7E-37 T 18-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CH53_2872 351dba26f9bce4b6898d666e5c5f326b 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 4.6E-9 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_2872 351dba26f9bce4b6898d666e5c5f326b 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 4.6E-9 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CH53_2872 351dba26f9bce4b6898d666e5c5f326b 153 Gene3D G3DSA:3.30.70.920 55 139 2.4E-24 T 18-10-2018 CH53_541 a0aa4c6d61698457a8f4864c0bd5eba8 363 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_541 a0aa4c6d61698457a8f4864c0bd5eba8 363 SMART SM00382 27 214 1.3E-18 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_541 a0aa4c6d61698457a8f4864c0bd5eba8 363 SUPERFAMILY SSF50331 239 326 7.37E-9 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CH53_541 a0aa4c6d61698457a8f4864c0bd5eba8 363 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 5.1E-126 T 18-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 CH53_541 a0aa4c6d61698457a8f4864c0bd5eba8 363 Pfam PF00005 ABC transporter 18 164 3.5E-36 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_541 a0aa4c6d61698457a8f4864c0bd5eba8 363 Gene3D G3DSA:3.40.50.300 2 264 8.6E-81 T 18-10-2018 CH53_541 a0aa4c6d61698457a8f4864c0bd5eba8 363 SUPERFAMILY SSF52540 3 244 2.89E-86 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1921 725b2573b3cb74d1e4340bfb19e69543 597 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1921 725b2573b3cb74d1e4340bfb19e69543 597 Pfam PF00664 ABC transporter transmembrane region 30 286 1.4E-9 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CH53_1921 725b2573b3cb74d1e4340bfb19e69543 597 SMART SM00382 362 548 5.9E-16 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1921 725b2573b3cb74d1e4340bfb19e69543 597 SUPERFAMILY SSF52540 326 561 2.06E-60 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1921 725b2573b3cb74d1e4340bfb19e69543 597 SUPERFAMILY SSF90123 16 323 2.75E-43 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_1921 725b2573b3cb74d1e4340bfb19e69543 597 Pfam PF00005 ABC transporter 353 500 1.5E-29 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1921 725b2573b3cb74d1e4340bfb19e69543 597 Gene3D G3DSA:1.20.1560.10 14 321 1.0E-35 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_1921 725b2573b3cb74d1e4340bfb19e69543 597 Gene3D G3DSA:3.40.50.300 328 570 1.9E-64 T 18-10-2018 CH53_1921 725b2573b3cb74d1e4340bfb19e69543 597 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 20 560 2.3E-226 T 18-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 CH53_3518 53e79f24cad6b60112dc4b68596989c1 66 Pfam PF14001 YdfZ protein 3 66 9.8E-35 T 18-10-2018 IPR017704 Putative selenium-binding protein YdfZ CH53_3518 53e79f24cad6b60112dc4b68596989c1 66 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 2 66 8.4E-35 T 18-10-2018 IPR017704 Putative selenium-binding protein YdfZ CH53_1603 c72f0ef16710396f855323189af78c8c 388 ProSitePatterns PS00336 Beta-lactamase class-C active site. 85 92 - T 18-10-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 CH53_1603 c72f0ef16710396f855323189af78c8c 388 Pfam PF00144 Beta-lactamase 38 387 2.9E-80 T 18-10-2018 IPR001466 Beta-lactamase-related CH53_1603 c72f0ef16710396f855323189af78c8c 388 Gene3D G3DSA:3.40.710.10 28 387 1.5E-123 T 18-10-2018 CH53_1603 c72f0ef16710396f855323189af78c8c 388 SUPERFAMILY SSF56601 31 387 6.91E-99 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CH53_3255 bb8efe07d707f59733f996fa800f29db 179 Gene3D G3DSA:1.20.58.320 1 78 5.6E-26 T 18-10-2018 CH53_3255 bb8efe07d707f59733f996fa800f29db 179 Gene3D G3DSA:1.25.40.10 79 179 1.2E-31 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_3255 bb8efe07d707f59733f996fa800f29db 179 Pfam PF06041 Bacterial protein of unknown function (DUF924) 6 176 5.5E-60 T 18-10-2018 IPR010323 Protein of unknown function DUF924 CH53_3255 bb8efe07d707f59733f996fa800f29db 179 SUPERFAMILY SSF48452 2 175 1.55E-66 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_393 bba3587eb175c50a69bf6f77ca068b76 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 18-10-2018 CH53_393 bba3587eb175c50a69bf6f77ca068b76 344 SUPERFAMILY SSF47413 12 70 5.34E-16 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_393 bba3587eb175c50a69bf6f77ca068b76 344 SUPERFAMILY SSF53822 70 322 1.2E-41 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_393 bba3587eb175c50a69bf6f77ca068b76 344 Gene3D G3DSA:3.40.50.2300 74 317 7.4E-57 T 18-10-2018 CH53_393 bba3587eb175c50a69bf6f77ca068b76 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 1.0E-17 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_393 bba3587eb175c50a69bf6f77ca068b76 344 Gene3D G3DSA:3.40.50.2300 168 301 7.4E-57 T 18-10-2018 CH53_393 bba3587eb175c50a69bf6f77ca068b76 344 Pfam PF13377 Periplasmic binding protein-like domain 181 344 7.0E-26 T 18-10-2018 CH53_393 bba3587eb175c50a69bf6f77ca068b76 344 SMART SM00354 12 82 9.1E-29 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_393 bba3587eb175c50a69bf6f77ca068b76 344 Gene3D G3DSA:1.10.260.40 3 70 1.7E-20 T 18-10-2018 CH53_257 8aa77dda8ff31c126c3706548bfe8fd5 194 Pfam PF00877 NlpC/P60 family 82 185 1.6E-31 T 18-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain CH53_257 8aa77dda8ff31c126c3706548bfe8fd5 194 Gene3D G3DSA:3.90.1720.10 65 193 1.3E-44 T 18-10-2018 CH53_257 8aa77dda8ff31c126c3706548bfe8fd5 194 SUPERFAMILY SSF54001 70 188 3.27E-39 T 18-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CH53_1379 557c203eaf3d1f4f58d16248cf15584a 256 TIGRFAM TIGR03239 GarL: 2-dehydro-3-deoxyglucarate aldolase 8 256 2.0E-146 T 18-10-2018 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 CH53_1379 557c203eaf3d1f4f58d16248cf15584a 256 Gene3D G3DSA:3.20.20.60 4 256 3.1E-82 T 18-10-2018 CH53_1379 557c203eaf3d1f4f58d16248cf15584a 256 Hamap MF_01291 5-keto-4-deoxy-D-glucarate aldolase [garL]. 1 256 70.209 T 18-10-2018 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 CH53_1379 557c203eaf3d1f4f58d16248cf15584a 256 SUPERFAMILY SSF51621 4 255 9.74E-80 T 18-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CH53_1379 557c203eaf3d1f4f58d16248cf15584a 256 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 21 245 6.7E-58 T 18-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CH53_2469 165de73fdc642ffeeab6edabc4c88280 795 Gene3D G3DSA:2.160.20.20 148 675 1.4E-20 T 18-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily CH53_2469 165de73fdc642ffeeab6edabc4c88280 795 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 2.3E-8 T 18-10-2018 IPR024973 ESPR domain CH53_2469 165de73fdc642ffeeab6edabc4c88280 795 Pfam PF03212 Pertactin 560 670 3.8E-10 T 18-10-2018 IPR004899 Pertactin, central region CH53_2374 5cbe82d5baa755c1ef80326e616ed726 480 SUPERFAMILY SSF53300 159 427 3.0E-10 T 18-10-2018 IPR036465 von Willebrand factor A-like domain superfamily CH53_1868 b0284eafcebca6a6cfb1bb444b56fb06 403 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 10 402 2.3E-217 T 18-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 CH53_1868 b0284eafcebca6a6cfb1bb444b56fb06 403 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 246 255 - T 18-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 CH53_1868 b0284eafcebca6a6cfb1bb444b56fb06 403 Pfam PF00155 Aminotransferase class I and II 48 392 2.8E-77 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_1868 b0284eafcebca6a6cfb1bb444b56fb06 403 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 7 400 53.438 T 18-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 CH53_1868 b0284eafcebca6a6cfb1bb444b56fb06 403 SUPERFAMILY SSF53383 9 401 1.05E-125 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_1868 b0284eafcebca6a6cfb1bb444b56fb06 403 Gene3D G3DSA:3.40.640.10 63 301 1.0E-138 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_1868 b0284eafcebca6a6cfb1bb444b56fb06 403 Gene3D G3DSA:3.90.1150.10 43 393 1.0E-138 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_3752 7af1dc8c1e2514364a6921228cd918ad 221 Gene3D G3DSA:2.40.128.20 36 221 4.0E-75 T 18-10-2018 IPR012674 Calycin CH53_3752 7af1dc8c1e2514364a6921228cd918ad 221 SUPERFAMILY SSF50814 39 221 8.93E-68 T 18-10-2018 IPR012674 Calycin CH53_3752 7af1dc8c1e2514364a6921228cd918ad 221 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 43 221 5.3E-80 T 18-10-2018 IPR015304 ZinT domain GO:0008270 CH53_3036 e681256b95ff9c74cde97ef6f65fb05e 296 Gene3D G3DSA:3.30.420.40 1 106 4.4E-21 T 18-10-2018 CH53_3036 e681256b95ff9c74cde97ef6f65fb05e 296 ProSitePatterns PS01125 ROK family signature. 133 160 - T 18-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CH53_3036 e681256b95ff9c74cde97ef6f65fb05e 296 Gene3D G3DSA:3.30.420.40 108 295 5.9E-64 T 18-10-2018 CH53_3036 e681256b95ff9c74cde97ef6f65fb05e 296 SUPERFAMILY SSF53067 2 292 6.48E-43 T 18-10-2018 CH53_3036 e681256b95ff9c74cde97ef6f65fb05e 296 Pfam PF00480 ROK family 3 292 3.9E-76 T 18-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CH53_627 98ef7e60bb6187d627dee8ecde53509a 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 4.4E-56 T 18-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 CH53_627 98ef7e60bb6187d627dee8ecde53509a 206 Gene3D G3DSA:1.25.40.10 36 205 4.7E-8 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_627 98ef7e60bb6187d627dee8ecde53509a 206 SUPERFAMILY SSF48452 91 191 3.6E-8 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_627 98ef7e60bb6187d627dee8ecde53509a 206 PIRSF PIRSF006170 1 206 7.7E-56 T 18-10-2018 IPR026039 Uncharacterised protein family UPF0070 CH53_3688 34d6e514d44adb3a6321d2397a6c2936 473 ProSitePatterns PS00218 Amino acid permeases signature. 23 53 - T 18-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CH53_3688 34d6e514d44adb3a6321d2397a6c2936 473 Pfam PF00324 Amino acid permease 1 437 8.8E-119 T 18-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CH53_3688 34d6e514d44adb3a6321d2397a6c2936 473 PIRSF PIRSF006060 1 450 5.0E-58 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_3688 34d6e514d44adb3a6321d2397a6c2936 473 Gene3D G3DSA:1.20.1740.10 1 444 1.3E-58 T 18-10-2018 CH53_3896 189955305dd3e270496c641afd215dc2 458 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 261 458 31.018 T 18-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CH53_3896 189955305dd3e270496c641afd215dc2 458 Gene3D G3DSA:3.20.20.70 262 452 1.6E-180 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3896 189955305dd3e270496c641afd215dc2 458 Gene3D G3DSA:3.20.20.70 14 261 1.6E-180 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3896 189955305dd3e270496c641afd215dc2 458 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 18-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CH53_3896 189955305dd3e270496c641afd215dc2 458 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 9 260 34.818 T 18-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CH53_3896 189955305dd3e270496c641afd215dc2 458 Pfam PF00218 Indole-3-glycerol phosphate synthase 11 257 2.3E-95 T 18-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CH53_3896 189955305dd3e270496c641afd215dc2 458 SUPERFAMILY SSF51366 263 456 1.08E-56 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CH53_3896 189955305dd3e270496c641afd215dc2 458 SUPERFAMILY SSF51366 9 257 6.36E-84 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CH53_3896 189955305dd3e270496c641afd215dc2 458 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 263 453 6.3E-57 T 18-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CH53_1384 c8a7479045f6df5e28fda8378f590bdb 623 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 303 320 - T 18-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CH53_1384 c8a7479045f6df5e28fda8378f590bdb 623 SUPERFAMILY SSF51445 26 419 1.79E-85 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_1384 c8a7479045f6df5e28fda8378f590bdb 623 Gene3D G3DSA:3.40.50.1700 415 622 1.9E-30 T 18-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 CH53_1384 c8a7479045f6df5e28fda8378f590bdb 623 Gene3D G3DSA:3.20.20.300 31 414 2.5E-123 T 18-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 CH53_1384 c8a7479045f6df5e28fda8378f590bdb 623 PRINTS PR00133 Glycosyl hydrolase family 3 signature 303 321 2.4E-6 T 18-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CH53_1384 c8a7479045f6df5e28fda8378f590bdb 623 PRINTS PR00133 Glycosyl hydrolase family 3 signature 217 233 2.4E-6 T 18-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CH53_1384 c8a7479045f6df5e28fda8378f590bdb 623 PRINTS PR00133 Glycosyl hydrolase family 3 signature 114 130 2.4E-6 T 18-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CH53_1384 c8a7479045f6df5e28fda8378f590bdb 623 PRINTS PR00133 Glycosyl hydrolase family 3 signature 139 158 2.4E-6 T 18-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CH53_1384 c8a7479045f6df5e28fda8378f590bdb 623 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 45 389 2.0E-85 T 18-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CH53_4190 87326eb39563677752de3f4d8d360e34 104 Pfam PF10765 Protein of unknown function (DUF2591) 23 93 3.6E-13 T 18-10-2018 IPR019701 Bacteriophage P22, NinX CH53_930 f6198b5fc8bb9028cf85889d6f32cc07 239 Gene3D G3DSA:3.90.550.10 6 239 2.2E-72 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_930 f6198b5fc8bb9028cf85889d6f32cc07 239 SUPERFAMILY SSF53448 11 236 1.25E-57 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_930 f6198b5fc8bb9028cf85889d6f32cc07 239 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 237 8.7E-82 T 18-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CH53_930 f6198b5fc8bb9028cf85889d6f32cc07 239 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 18-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CH53_930 f6198b5fc8bb9028cf85889d6f32cc07 239 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 235 2.3E-72 T 18-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CH53_930 f6198b5fc8bb9028cf85889d6f32cc07 239 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 10 235 42.747 T 18-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CH53_4090 59512c2ff65e0cb23ad158351afc40e0 553 Pfam PF00884 Sulfatase 237 525 1.0E-47 T 18-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CH53_4090 59512c2ff65e0cb23ad158351afc40e0 553 Pfam PF08019 Domain of unknown function (DUF1705) 56 208 4.5E-51 T 18-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 CH53_4090 59512c2ff65e0cb23ad158351afc40e0 553 Gene3D G3DSA:3.40.720.10 225 545 1.2E-87 T 18-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CH53_4090 59512c2ff65e0cb23ad158351afc40e0 553 SUPERFAMILY SSF53649 237 539 1.42E-21 T 18-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CH53_2673 10a076c48816c637ac1dacf69b17f3d2 313 Gene3D G3DSA:3.40.190.290 96 304 6.5E-37 T 18-10-2018 CH53_2673 10a076c48816c637ac1dacf69b17f3d2 313 Gene3D G3DSA:1.10.10.10 4 95 9.6E-15 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2673 10a076c48816c637ac1dacf69b17f3d2 313 SUPERFAMILY SSF53850 94 298 2.04E-40 T 18-10-2018 CH53_2673 10a076c48816c637ac1dacf69b17f3d2 313 SUPERFAMILY SSF46785 3 84 1.2E-15 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2673 10a076c48816c637ac1dacf69b17f3d2 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 7.5E-14 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2673 10a076c48816c637ac1dacf69b17f3d2 313 Pfam PF03466 LysR substrate binding domain 93 297 1.7E-38 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_222 549a78e403b6d9359968ff76ee3c756e 355 Gene3D G3DSA:2.60.120.330 14 324 2.9E-86 T 18-10-2018 IPR027443 Isopenicillin N synthase-like CH53_222 549a78e403b6d9359968ff76ee3c756e 355 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 197 293 2.6E-18 T 18-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CH53_222 549a78e403b6d9359968ff76ee3c756e 355 SUPERFAMILY SSF51197 13 302 5.97E-83 T 18-10-2018 CH53_222 549a78e403b6d9359968ff76ee3c756e 355 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 25 148 6.4E-37 T 18-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain CH53_222 549a78e403b6d9359968ff76ee3c756e 355 PRINTS PR00682 Isopenicillin N synthase signature 47 64 3.4E-11 T 18-10-2018 CH53_222 549a78e403b6d9359968ff76ee3c756e 355 PRINTS PR00682 Isopenicillin N synthase signature 254 280 3.4E-11 T 18-10-2018 CH53_222 549a78e403b6d9359968ff76ee3c756e 355 PRINTS PR00682 Isopenicillin N synthase signature 218 239 3.4E-11 T 18-10-2018 CH53_4279 7c659ca2f25745e4e9234333b30f54db 876 Pfam PF02470 MlaD protein 46 137 5.6E-17 T 18-10-2018 IPR003399 Mce/MlaD CH53_4279 7c659ca2f25745e4e9234333b30f54db 876 Pfam PF02470 MlaD protein 163 220 1.8E-6 T 18-10-2018 IPR003399 Mce/MlaD CH53_4279 7c659ca2f25745e4e9234333b30f54db 876 Pfam PF02470 MlaD protein 634 722 4.8E-10 T 18-10-2018 IPR003399 Mce/MlaD CH53_4279 7c659ca2f25745e4e9234333b30f54db 876 Pfam PF02470 MlaD protein 747 806 2.4E-9 T 18-10-2018 IPR003399 Mce/MlaD CH53_4279 7c659ca2f25745e4e9234333b30f54db 876 Pfam PF02470 MlaD protein 280 348 2.2E-6 T 18-10-2018 IPR003399 Mce/MlaD CH53_2658 799ab3650b0c8125c96af59957ee7a83 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 366 380 3.5E-32 T 18-10-2018 IPR003004 GspF/PilC family CH53_2658 799ab3650b0c8125c96af59957ee7a83 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 64 76 3.5E-32 T 18-10-2018 IPR003004 GspF/PilC family CH53_2658 799ab3650b0c8125c96af59957ee7a83 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 382 401 3.5E-32 T 18-10-2018 IPR003004 GspF/PilC family CH53_2658 799ab3650b0c8125c96af59957ee7a83 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 163 191 3.5E-32 T 18-10-2018 IPR003004 GspF/PilC family CH53_2658 799ab3650b0c8125c96af59957ee7a83 402 Pfam PF00482 Type II secretion system (T2SS), protein F 69 191 2.2E-27 T 18-10-2018 IPR018076 Type II secretion system F domain CH53_2658 799ab3650b0c8125c96af59957ee7a83 402 Pfam PF00482 Type II secretion system (T2SS), protein F 272 391 4.1E-24 T 18-10-2018 IPR018076 Type II secretion system F domain CH53_2658 799ab3650b0c8125c96af59957ee7a83 402 Gene3D G3DSA:1.20.81.30 254 365 3.6E-21 T 18-10-2018 CH53_2658 799ab3650b0c8125c96af59957ee7a83 402 Gene3D G3DSA:1.20.81.30 54 168 1.8E-26 T 18-10-2018 CH53_1648 5657de9c580b23eeab62115e2ec4adcf 443 Gene3D G3DSA:1.20.1250.20 19 223 2.8E-50 T 18-10-2018 CH53_1648 5657de9c580b23eeab62115e2ec4adcf 443 Gene3D G3DSA:1.20.1250.20 237 439 1.0E-46 T 18-10-2018 CH53_1648 5657de9c580b23eeab62115e2ec4adcf 443 SUPERFAMILY SSF103473 17 433 6.15E-81 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_1648 5657de9c580b23eeab62115e2ec4adcf 443 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 7.8E-143 T 18-10-2018 CH53_1648 5657de9c580b23eeab62115e2ec4adcf 443 PIRSF PIRSF002808 6 443 2.3E-142 T 18-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 CH53_1648 5657de9c580b23eeab62115e2ec4adcf 443 Pfam PF07690 Major Facilitator Superfamily 36 396 2.2E-48 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_4425 c521ec9d35fa3474a603f0f69869c382 266 SUPERFAMILY SSF51556 1 259 1.02E-85 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_4425 c521ec9d35fa3474a603f0f69869c382 266 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 18-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CH53_4425 c521ec9d35fa3474a603f0f69869c382 266 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 18-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CH53_4425 c521ec9d35fa3474a603f0f69869c382 266 Pfam PF01026 TatD related DNase 4 255 2.1E-76 T 18-10-2018 IPR001130 TatD family GO:0016788 CH53_4425 c521ec9d35fa3474a603f0f69869c382 266 Gene3D G3DSA:3.20.20.140 1 264 2.4E-98 T 18-10-2018 CH53_4425 c521ec9d35fa3474a603f0f69869c382 266 PIRSF PIRSF005902 1 259 1.6E-72 T 18-10-2018 IPR001130 TatD family GO:0016788 CH53_4425 c521ec9d35fa3474a603f0f69869c382 266 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 3.1E-91 T 18-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 CH53_4425 c521ec9d35fa3474a603f0f69869c382 266 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 18-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CH53_3012 6eed1cfab55dc60be5c7beedac8cbaf7 875 Pfam PF07728 AAA domain (dynein-related subfamily) 638 722 4.8E-10 T 18-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CH53_3012 6eed1cfab55dc60be5c7beedac8cbaf7 875 Gene3D G3DSA:3.40.50.300 590 735 1.4E-9 T 18-10-2018 CH53_3012 6eed1cfab55dc60be5c7beedac8cbaf7 875 SUPERFAMILY SSF52540 349 733 1.22E-10 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3997 7240e06a12b1ed50cbbf432d7e9055eb 346 Pfam PF02424 ApbE family 37 320 2.3E-79 T 18-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 CH53_3997 7240e06a12b1ed50cbbf432d7e9055eb 346 Gene3D G3DSA:3.10.520.20 19 346 4.2E-115 T 18-10-2018 CH53_3997 7240e06a12b1ed50cbbf432d7e9055eb 346 PIRSF PIRSF006268 2 342 9.8E-91 T 18-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 CH53_3997 7240e06a12b1ed50cbbf432d7e9055eb 346 SUPERFAMILY SSF143631 30 341 2.88E-93 T 18-10-2018 IPR003374 ApbE-like superfamily CH53_107 ea0b040df41d85ee4123607ec2eca418 138 Gene3D G3DSA:3.40.50.720 1 138 1.4E-41 T 18-10-2018 CH53_107 ea0b040df41d85ee4123607ec2eca418 138 SUPERFAMILY SSF51735 2 134 1.04E-42 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_107 ea0b040df41d85ee4123607ec2eca418 138 Pfam PF13380 CoA binding domain 14 130 1.4E-37 T 18-10-2018 IPR003781 CoA-binding GO:0048037 CH53_107 ea0b040df41d85ee4123607ec2eca418 138 SMART SM00881 10 104 7.2E-26 T 18-10-2018 IPR003781 CoA-binding GO:0048037 CH53_2059 435b74c765d6480f9555b86f77a265ab 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.263 T 18-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CH53_2059 435b74c765d6480f9555b86f77a265ab 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 18-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CH53_2059 435b74c765d6480f9555b86f77a265ab 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 18-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CH53_2059 435b74c765d6480f9555b86f77a265ab 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 250 1.9E-106 T 18-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CH53_2059 435b74c765d6480f9555b86f77a265ab 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 1.7E-86 T 18-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CH53_2059 435b74c765d6480f9555b86f77a265ab 251 Gene3D G3DSA:3.40.50.150 31 251 1.6E-75 T 18-10-2018 CH53_2059 435b74c765d6480f9555b86f77a265ab 251 SUPERFAMILY SSF53335 19 248 2.63E-51 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_1930 70ddc271a794c0fc4814075f23133557 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 2.4E-7 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_1930 70ddc271a794c0fc4814075f23133557 210 SUPERFAMILY SSF46689 3 77 2.32E-12 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1930 70ddc271a794c0fc4814075f23133557 210 Gene3D G3DSA:1.10.10.60 2 52 1.8E-22 T 18-10-2018 CH53_1930 70ddc271a794c0fc4814075f23133557 210 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 1 209 52.733 T 18-10-2018 IPR023764 Transcriptional repressor HTH, FabR CH53_1930 70ddc271a794c0fc4814075f23133557 210 Gene3D G3DSA:1.10.357.10 53 209 2.4E-42 T 18-10-2018 CH53_1151 6ff14f69153063b28fea21d56e50d897 364 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 18-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CH53_1151 6ff14f69153063b28fea21d56e50d897 364 Gene3D G3DSA:1.20.1090.10 160 364 6.0E-81 T 18-10-2018 CH53_1151 6ff14f69153063b28fea21d56e50d897 364 Gene3D G3DSA:3.40.50.1970 2 159 9.3E-45 T 18-10-2018 CH53_1151 6ff14f69153063b28fea21d56e50d897 364 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 2.4E-69 T 18-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CH53_1151 6ff14f69153063b28fea21d56e50d897 364 SUPERFAMILY SSF56796 2 353 1.83E-91 T 18-10-2018 CH53_1151 6ff14f69153063b28fea21d56e50d897 364 PIRSF PIRSF000112 1 360 2.4E-95 T 18-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 CH53_1151 6ff14f69153063b28fea21d56e50d897 364 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 18-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CH53_4303 dc99539230d23613f3d66569c23e2c26 61 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 23 54 1.8E-8 T 18-10-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CH53_1407 c41c0dc3985883636acc01a2a92f8c72 264 Pfam PF01311 Bacterial export proteins, family 1 10 240 1.7E-50 T 18-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CH53_1407 c41c0dc3985883636acc01a2a92f8c72 264 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 2 252 1.8E-72 T 18-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 CH53_1407 c41c0dc3985883636acc01a2a92f8c72 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 2.1E-27 T 18-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CH53_1407 c41c0dc3985883636acc01a2a92f8c72 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 17 38 2.1E-27 T 18-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CH53_1407 c41c0dc3985883636acc01a2a92f8c72 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 78 97 2.1E-27 T 18-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CH53_1407 c41c0dc3985883636acc01a2a92f8c72 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 2.1E-27 T 18-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CH53_1250 acc198024450dbf0146a849bf5f63b68 307 Gene3D G3DSA:3.40.190.10 96 295 1.4E-62 T 18-10-2018 CH53_1250 acc198024450dbf0146a849bf5f63b68 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.3E-5 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1250 acc198024450dbf0146a849bf5f63b68 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.3E-5 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1250 acc198024450dbf0146a849bf5f63b68 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.3E-5 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1250 acc198024450dbf0146a849bf5f63b68 307 Pfam PF03466 LysR substrate binding domain 93 298 8.5E-46 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_1250 acc198024450dbf0146a849bf5f63b68 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 9.0E-17 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1250 acc198024450dbf0146a849bf5f63b68 307 Gene3D G3DSA:3.40.190.10 168 270 1.4E-62 T 18-10-2018 CH53_1250 acc198024450dbf0146a849bf5f63b68 307 SUPERFAMILY SSF53850 93 301 9.15E-47 T 18-10-2018 CH53_1250 acc198024450dbf0146a849bf5f63b68 307 Gene3D G3DSA:1.10.10.10 8 88 4.2E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1250 acc198024450dbf0146a849bf5f63b68 307 SUPERFAMILY SSF46785 9 117 3.42E-19 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_4399 4c8e87ae8535d26acad89946ed0bcd53 417 SUPERFAMILY SSF53659 4 417 2.11E-147 T 18-10-2018 CH53_4399 4c8e87ae8535d26acad89946ed0bcd53 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 18-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CH53_4399 4c8e87ae8535d26acad89946ed0bcd53 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 413 5.2E-116 T 18-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CH53_4399 4c8e87ae8535d26acad89946ed0bcd53 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 417 2.2E-234 T 18-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CH53_4399 4c8e87ae8535d26acad89946ed0bcd53 417 Gene3D G3DSA:3.40.718.10 1 417 1.8E-185 T 18-10-2018 CH53_4399 4c8e87ae8535d26acad89946ed0bcd53 417 SMART SM01329 29 413 1.7E-179 T 18-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CH53_1960 017c91871cfab33e9b64808579158ca4 455 SUPERFAMILY SSF49401 285 453 1.04E-10 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_1960 017c91871cfab33e9b64808579158ca4 455 PIRSF PIRSF029766 26 455 2.6E-171 T 18-10-2018 IPR011228 Uncharacterised conserved protein UCP029766 CH53_1960 017c91871cfab33e9b64808579158ca4 455 Pfam PF00419 Fimbrial protein 276 455 6.5E-28 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_1960 017c91871cfab33e9b64808579158ca4 455 Gene3D G3DSA:2.60.40.1090 283 453 5.2E-10 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_2821 6a4f6682a470006a5f8abdb4e48d226e 229 SMART SM00448 3 116 3.2E-44 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_2821 6a4f6682a470006a5f8abdb4e48d226e 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 3.3E-114 T 18-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 CH53_2821 6a4f6682a470006a5f8abdb4e48d226e 229 SUPERFAMILY SSF52172 3 126 1.85E-42 T 18-10-2018 IPR011006 CheY-like superfamily CH53_2821 6a4f6682a470006a5f8abdb4e48d226e 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.2E-27 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_2821 6a4f6682a470006a5f8abdb4e48d226e 229 SUPERFAMILY SSF46894 129 226 1.36E-31 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_2821 6a4f6682a470006a5f8abdb4e48d226e 229 Gene3D G3DSA:3.40.50.2300 1 127 2.1E-37 T 18-10-2018 CH53_2821 6a4f6682a470006a5f8abdb4e48d226e 229 Gene3D G3DSA:1.10.10.10 128 229 1.9E-41 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2821 6a4f6682a470006a5f8abdb4e48d226e 229 SMART SM00862 150 225 1.7E-26 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_2821 6a4f6682a470006a5f8abdb4e48d226e 229 Pfam PF00072 Response regulator receiver domain 5 117 1.5E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_609 70cd4cac6375ae46e114d407b46eb35a 120 SUPERFAMILY SSF141530 3 119 2.22E-38 T 18-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 CH53_609 70cd4cac6375ae46e114d407b46eb35a 120 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 118 2.0E-36 T 18-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 CH53_609 70cd4cac6375ae46e114d407b46eb35a 120 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 115 1.0E-38 T 18-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 CH53_609 70cd4cac6375ae46e114d407b46eb35a 120 Gene3D G3DSA:2.40.33.40 1 120 7.6E-30 T 18-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 CH53_1474 7b9ff27584594d525cfb8b7eea356a87 130 Pfam PF00410 Ribosomal protein S8 5 129 1.3E-48 T 18-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1474 7b9ff27584594d525cfb8b7eea356a87 130 Gene3D G3DSA:3.30.1490.10 73 130 1.1E-25 T 18-10-2018 CH53_1474 7b9ff27584594d525cfb8b7eea356a87 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.729 T 18-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1474 7b9ff27584594d525cfb8b7eea356a87 130 Gene3D G3DSA:3.30.1370.30 2 72 1.6E-27 T 18-10-2018 CH53_1474 7b9ff27584594d525cfb8b7eea356a87 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 18-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1474 7b9ff27584594d525cfb8b7eea356a87 130 SUPERFAMILY SSF56047 5 129 3.4E-46 T 18-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1825 b33cfcb7b4075b74e911f9543ebc1bc5 219 SUPERFAMILY SSF75217 3 162 8.5E-49 T 18-10-2018 IPR029028 Alpha/beta knot methyltransferases CH53_1825 b33cfcb7b4075b74e911f9543ebc1bc5 219 Pfam PF12105 SpoU, rRNA methylase, C-terminal 152 207 1.1E-24 T 18-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 CH53_1825 b33cfcb7b4075b74e911f9543ebc1bc5 219 Pfam PF00588 SpoU rRNA Methylase family 9 148 3.8E-36 T 18-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CH53_1825 b33cfcb7b4075b74e911f9543ebc1bc5 219 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 1 186 32.344 T 18-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 CH53_1825 b33cfcb7b4075b74e911f9543ebc1bc5 219 Gene3D G3DSA:3.40.1280.10 1 179 3.1E-60 T 18-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH53_2291 386ec12f55b113e5c721194fd69069dc 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 1.7E-32 T 18-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 CH53_2291 386ec12f55b113e5c721194fd69069dc 101 Gene3D G3DSA:1.20.120.20 3 78 3.2E-5 T 18-10-2018 CH53_1719 0fc36f6a47fa3f394c6b06b091c9d53f 311 Gene3D G3DSA:3.30.1780.10 4 309 3.0E-79 T 18-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 CH53_1719 0fc36f6a47fa3f394c6b06b091c9d53f 311 SUPERFAMILY SSF51735 1 307 1.75E-77 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1719 0fc36f6a47fa3f394c6b06b091c9d53f 311 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 4 307 6.3E-65 T 18-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 CH53_1719 0fc36f6a47fa3f394c6b06b091c9d53f 311 Gene3D G3DSA:3.40.50.720 125 297 3.0E-79 T 18-10-2018 CH53_1719 0fc36f6a47fa3f394c6b06b091c9d53f 311 PIRSF PIRSF001439 1 310 3.5E-59 T 18-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 CH53_3605 777711dc7a553996a5a22efc3e24707e 182 Pfam PF01161 Phosphatidylethanolamine-binding protein 44 180 2.7E-38 T 18-10-2018 IPR008914 Phosphatidylethanolamine-binding protein CH53_3605 777711dc7a553996a5a22efc3e24707e 182 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 40 179 6.2E-49 T 18-10-2018 IPR005247 YbhB/YbcL CH53_3605 777711dc7a553996a5a22efc3e24707e 182 Gene3D G3DSA:3.90.280.10 8 182 8.5E-61 T 18-10-2018 IPR036610 PEBP-like superfamily CH53_3605 777711dc7a553996a5a22efc3e24707e 182 SUPERFAMILY SSF49777 22 181 4.19E-55 T 18-10-2018 IPR036610 PEBP-like superfamily CH53_2659 6f1a479aa966db09b4080beac6c74c8a 141 Gene3D G3DSA:3.30.700.10 22 137 7.2E-34 T 18-10-2018 CH53_2659 6f1a479aa966db09b4080beac6c74c8a 141 Pfam PF08334 Type II secretion system (T2SS), protein G 32 137 6.0E-31 T 18-10-2018 IPR013545 Type II secretion system protein G CH53_2659 6f1a479aa966db09b4080beac6c74c8a 141 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 8 137 6.6E-53 T 18-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 CH53_2659 6f1a479aa966db09b4080beac6c74c8a 141 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 28 1.5E-7 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site CH53_2659 6f1a479aa966db09b4080beac6c74c8a 141 SUPERFAMILY SSF54523 35 139 1.26E-34 T 18-10-2018 CH53_2659 6f1a479aa966db09b4080beac6c74c8a 141 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 6.5E-22 T 18-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CH53_2659 6f1a479aa966db09b4080beac6c74c8a 141 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 6.5E-22 T 18-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CH53_2659 6f1a479aa966db09b4080beac6c74c8a 141 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 27 2.3E-7 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site CH53_428 21b42329fc5eb392cf4883d148830645 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 362 3.1E-30 T 18-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CH53_428 21b42329fc5eb392cf4883d148830645 407 SUPERFAMILY SSF53901 216 405 1.89E-61 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_428 21b42329fc5eb392cf4883d148830645 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 18-10-2018 IPR018201 Beta-ketoacyl synthase, active site CH53_428 21b42329fc5eb392cf4883d148830645 407 SUPERFAMILY SSF53901 1 254 3.73E-62 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_428 21b42329fc5eb392cf4883d148830645 407 Gene3D G3DSA:3.40.47.10 6 260 3.2E-64 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_428 21b42329fc5eb392cf4883d148830645 407 Gene3D G3DSA:3.40.47.10 261 407 5.3E-52 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_428 21b42329fc5eb392cf4883d148830645 407 SMART SM00825 Beta-ketoacyl synthase 4 407 6.9E-13 T 18-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH53_428 21b42329fc5eb392cf4883d148830645 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 247 1.5E-40 T 18-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CH53_2341 46e39065e704b970f3b8512e294552e3 386 SUPERFAMILY SSF56059 1 383 2.94E-92 T 18-10-2018 CH53_2341 46e39065e704b970f3b8512e294552e3 386 Gene3D G3DSA:3.30.1490.330 263 343 3.1E-29 T 18-10-2018 CH53_2341 46e39065e704b970f3b8512e294552e3 386 SUPERFAMILY SSF52440 174 279 1.04E-41 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CH53_2341 46e39065e704b970f3b8512e294552e3 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 8.5E-165 T 18-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CH53_545 24113cd1084f269b49a47a726e4d5997 301 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 297 1.5E-86 T 18-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CH53_545 24113cd1084f269b49a47a726e4d5997 301 SUPERFAMILY SSF54909 1 299 2.5E-93 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_545 24113cd1084f269b49a47a726e4d5997 301 Pfam PF04261 Dyp-type peroxidase family 5 296 9.6E-93 T 18-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CH53_4075 c52522102e02d7d5d215ebc8b2d34aa3 196 Pfam PF06930 Protein of unknown function (DUF1282) 8 179 1.2E-48 T 18-10-2018 IPR009698 Protein of unknown function DUF1282 CH53_4128 141e6ba80e0da8dfa171285e4a920a40 143 Pfam PF00877 NlpC/P60 family 36 142 2.4E-27 T 18-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain CH53_4128 141e6ba80e0da8dfa171285e4a920a40 143 Gene3D G3DSA:3.90.1720.10 22 143 6.1E-38 T 18-10-2018 CH53_4128 141e6ba80e0da8dfa171285e4a920a40 143 SUPERFAMILY SSF54001 22 143 3.68E-38 T 18-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CH53_370 c970cee47b8f681e9103c3fd10c1c18a 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.738 T 18-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CH53_370 c970cee47b8f681e9103c3fd10c1c18a 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 3.3E-83 T 18-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_370 c970cee47b8f681e9103c3fd10c1c18a 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 6.2E-135 T 18-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CH53_1996 26b4437406e5865fe609a17f6be0f6a7 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 18-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CH53_1996 26b4437406e5865fe609a17f6be0f6a7 274 Pfam PF01678 Diaminopimelate epimerase 3 123 1.7E-33 T 18-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CH53_1996 26b4437406e5865fe609a17f6be0f6a7 274 Pfam PF01678 Diaminopimelate epimerase 152 267 1.2E-31 T 18-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CH53_1996 26b4437406e5865fe609a17f6be0f6a7 274 Gene3D G3DSA:3.10.310.10 3 270 5.9E-106 T 18-10-2018 CH53_1996 26b4437406e5865fe609a17f6be0f6a7 274 Gene3D G3DSA:3.10.310.10 115 261 5.9E-106 T 18-10-2018 CH53_1996 26b4437406e5865fe609a17f6be0f6a7 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.013 T 18-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CH53_1996 26b4437406e5865fe609a17f6be0f6a7 274 SUPERFAMILY SSF54506 2 273 4.5E-53 T 18-10-2018 CH53_1996 26b4437406e5865fe609a17f6be0f6a7 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 1.3E-101 T 18-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CH53_1883 9015f8150e9340e42977400f19eedc73 99 Gene3D G3DSA:1.10.260.40 20 97 1.4E-17 T 18-10-2018 CH53_1883 9015f8150e9340e42977400f19eedc73 99 Pfam PF01381 Helix-turn-helix 41 91 2.1E-14 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_1883 9015f8150e9340e42977400f19eedc73 99 SMART SM00530 40 95 1.8E-12 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_1883 9015f8150e9340e42977400f19eedc73 99 SUPERFAMILY SSF47413 28 91 2.35E-17 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_728 210184e956d8d92bda07e5cf7056a40e 228 Gene3D G3DSA:2.60.260.20 1 79 4.2E-13 T 18-10-2018 CH53_728 210184e956d8d92bda07e5cf7056a40e 228 SMART SM00988 11 75 1.5E-14 T 18-10-2018 IPR004029 UreE urease accessory, N-terminal CH53_728 210184e956d8d92bda07e5cf7056a40e 228 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 159 14.581 T 18-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 CH53_728 210184e956d8d92bda07e5cf7056a40e 228 Pfam PF05194 UreE urease accessory protein, C-terminal domain 85 219 6.0E-9 T 18-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 CH53_728 210184e956d8d92bda07e5cf7056a40e 228 Pfam PF02814 UreE urease accessory protein, N-terminal domain 15 73 1.1E-16 T 18-10-2018 IPR004029 UreE urease accessory, N-terminal CH53_728 210184e956d8d92bda07e5cf7056a40e 228 SUPERFAMILY SSF69287 3 79 1.05E-17 T 18-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily CH53_728 210184e956d8d92bda07e5cf7056a40e 228 PIRSF PIRSF036402 2 221 7.5E-37 T 18-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 CH53_3762 887e4c54da26814f87efeb2b2d67d27a 207 SUPERFAMILY SSF89392 21 206 1.22E-57 T 18-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CH53_3762 887e4c54da26814f87efeb2b2d67d27a 207 Pfam PF03550 Outer membrane lipoprotein LolB 51 204 1.9E-48 T 18-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CH53_3762 887e4c54da26814f87efeb2b2d67d27a 207 Gene3D G3DSA:2.50.20.10 30 207 1.2E-62 T 18-10-2018 CH53_3762 887e4c54da26814f87efeb2b2d67d27a 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 206 30.45 T 18-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CH53_3762 887e4c54da26814f87efeb2b2d67d27a 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 7 205 3.1E-77 T 18-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CH53_3991 64be4943f3ee4a6ed31f095a15687843 371 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 29 358 1.5E-32 T 18-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 CH53_3991 64be4943f3ee4a6ed31f095a15687843 371 Gene3D G3DSA:3.40.630.10 2 286 6.5E-79 T 18-10-2018 CH53_3991 64be4943f3ee4a6ed31f095a15687843 371 SUPERFAMILY SSF53187 16 363 4.96E-43 T 18-10-2018 CH53_3562 56eefa55b3a83d340f25aaa85e4ee1ce 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 1.1E-30 T 18-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CH53_3562 56eefa55b3a83d340f25aaa85e4ee1ce 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 1.1E-30 T 18-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CH53_3562 56eefa55b3a83d340f25aaa85e4ee1ce 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.1E-30 T 18-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CH53_3562 56eefa55b3a83d340f25aaa85e4ee1ce 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.1E-30 T 18-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CH53_3562 56eefa55b3a83d340f25aaa85e4ee1ce 260 Pfam PF01311 Bacterial export proteins, family 1 14 246 2.9E-67 T 18-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CH53_3562 56eefa55b3a83d340f25aaa85e4ee1ce 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 254 2.6E-75 T 18-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 CH53_933 6ad671ed9703d23501aa24f8f152782e 255 SUPERFAMILY SSF161098 14 234 1.23E-41 T 18-10-2018 IPR035906 MetI-like superfamily CH53_933 6ad671ed9703d23501aa24f8f152782e 255 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 91 1.4E-11 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CH53_933 6ad671ed9703d23501aa24f8f152782e 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 62 248 4.6E-23 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_933 6ad671ed9703d23501aa24f8f152782e 255 Gene3D G3DSA:1.10.3720.10 3 253 1.2E-54 T 18-10-2018 IPR035906 MetI-like superfamily CH53_4032 e0f90763f35e361d71500c34caecccdb 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 146 166 1.3E-38 T 18-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CH53_4032 e0f90763f35e361d71500c34caecccdb 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 444 462 1.3E-38 T 18-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CH53_4032 e0f90763f35e361d71500c34caecccdb 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 399 420 1.3E-38 T 18-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CH53_4032 e0f90763f35e361d71500c34caecccdb 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 329 348 1.3E-38 T 18-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CH53_4032 e0f90763f35e361d71500c34caecccdb 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 262 281 1.3E-38 T 18-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CH53_4032 e0f90763f35e361d71500c34caecccdb 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 289 305 1.3E-38 T 18-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CH53_4032 e0f90763f35e361d71500c34caecccdb 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 242 261 1.3E-38 T 18-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CH53_4032 e0f90763f35e361d71500c34caecccdb 493 Gene3D G3DSA:1.10.1370.30 1 493 1.5E-202 T 18-10-2018 CH53_4032 e0f90763f35e361d71500c34caecccdb 493 SUPERFAMILY SSF55486 3 493 3.3E-120 T 18-10-2018 CH53_4032 e0f90763f35e361d71500c34caecccdb 493 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 12 492 6.4E-97 T 18-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CH53_4032 e0f90763f35e361d71500c34caecccdb 493 PIRSF PIRSF006615 1 493 1.2E-199 T 18-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CH53_2242 65b26e51c57250547c0ae110e53bef17 283 SUPERFAMILY SSF52540 2 151 1.68E-12 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2242 65b26e51c57250547c0ae110e53bef17 283 Pfam PF03668 P-loop ATPase protein family 1 282 2.3E-144 T 18-10-2018 IPR005337 RapZ-like family GO:0005524 CH53_2242 65b26e51c57250547c0ae110e53bef17 283 PIRSF PIRSF005052 1 283 1.0E-113 T 18-10-2018 IPR005337 RapZ-like family GO:0005524 CH53_2242 65b26e51c57250547c0ae110e53bef17 283 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 40.967 T 18-10-2018 IPR005337 RapZ-like family GO:0005524 CH53_3754 b8dddbb5b25c914bef7dc158ec9840d5 228 Gene3D G3DSA:2.70.70.10 86 219 4.8E-36 T 18-10-2018 IPR011055 Duplicated hybrid motif CH53_3754 b8dddbb5b25c914bef7dc158ec9840d5 228 SMART SM00257 26 70 1.6E-10 T 18-10-2018 IPR018392 LysM domain CH53_3754 b8dddbb5b25c914bef7dc158ec9840d5 228 Pfam PF01551 Peptidase family M23 122 215 1.4E-29 T 18-10-2018 IPR016047 Peptidase M23 CH53_3754 b8dddbb5b25c914bef7dc158ec9840d5 228 SUPERFAMILY SSF51261 27 219 1.2E-47 T 18-10-2018 IPR011055 Duplicated hybrid motif CH53_3754 b8dddbb5b25c914bef7dc158ec9840d5 228 Gene3D G3DSA:3.10.350.10 20 85 1.7E-12 T 18-10-2018 IPR036779 LysM domain superfamily CH53_3754 b8dddbb5b25c914bef7dc158ec9840d5 228 Pfam PF01476 LysM domain 27 69 1.0E-11 T 18-10-2018 IPR018392 LysM domain CH53_3730 823da244fd535ddb200b6602cf22f8e2 476 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 2.1E-168 T 18-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CH53_3730 823da244fd535ddb200b6602cf22f8e2 476 PIRSF PIRSF006446 2 462 6.3E-228 T 18-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CH53_4124 25352676e0a3805fff67a030ab2ba199 353 Gene3D G3DSA:3.40.1570.10 14 288 1.2E-112 T 18-10-2018 CH53_4124 25352676e0a3805fff67a030ab2ba199 353 Gene3D G3DSA:3.40.1570.10 82 338 1.2E-112 T 18-10-2018 CH53_4124 25352676e0a3805fff67a030ab2ba199 353 Pfam PF05171 Haemin-degrading HemS.ChuX domain 206 345 5.8E-34 T 18-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 CH53_4124 25352676e0a3805fff67a030ab2ba199 353 Pfam PF05171 Haemin-degrading HemS.ChuX domain 29 157 2.1E-29 T 18-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 CH53_4124 25352676e0a3805fff67a030ab2ba199 353 SUPERFAMILY SSF144064 5 345 5.69E-117 T 18-10-2018 CH53_2443 5591ebaa9526ee099c708a660175c338 349 Pfam PF13533 Biotin-lipoyl like 51 99 6.3E-14 T 18-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CH53_2443 5591ebaa9526ee099c708a660175c338 349 SUPERFAMILY SSF111369 124 262 5.23E-9 T 18-10-2018 CH53_2443 5591ebaa9526ee099c708a660175c338 349 Pfam PF13437 HlyD family secretion protein 214 329 1.9E-10 T 18-10-2018 CH53_2443 5591ebaa9526ee099c708a660175c338 349 Gene3D G3DSA:2.40.50.100 50 84 2.3E-13 T 18-10-2018 CH53_2443 5591ebaa9526ee099c708a660175c338 349 Gene3D G3DSA:1.10.287.470 118 191 5.2E-6 T 18-10-2018 CH53_2443 5591ebaa9526ee099c708a660175c338 349 Gene3D G3DSA:1.10.287.470 85 114 2.3E-13 T 18-10-2018 CH53_2443 5591ebaa9526ee099c708a660175c338 349 Gene3D G3DSA:2.40.30.170 228 347 3.6E-27 T 18-10-2018 CH53_2443 5591ebaa9526ee099c708a660175c338 349 SUPERFAMILY SSF111369 50 111 4.71E-10 T 18-10-2018 CH53_2186 ed92917dd1002148035ecdfe0b898df7 156 Pfam PF05433 Glycine zipper 2TM domain 62 102 1.9E-6 T 18-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CH53_3806 963b946ec1fdb33a2d4062c1f5df1cef 318 SUPERFAMILY SSF53807 29 318 2.8E-78 T 18-10-2018 CH53_3806 963b946ec1fdb33a2d4062c1f5df1cef 318 Pfam PF01297 Zinc-uptake complex component A periplasmic 30 314 7.0E-56 T 18-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CH53_3806 963b946ec1fdb33a2d4062c1f5df1cef 318 Gene3D G3DSA:3.40.50.1980 207 318 4.7E-41 T 18-10-2018 CH53_3806 963b946ec1fdb33a2d4062c1f5df1cef 318 Gene3D G3DSA:3.40.50.1980 29 205 4.6E-55 T 18-10-2018 CH53_2448 6d46d2f32b567638cd7e5bc0d570fae8 183 SUPERFAMILY SSF49401 30 183 4.32E-14 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_2448 6d46d2f32b567638cd7e5bc0d570fae8 183 Gene3D G3DSA:2.60.40.1090 28 182 2.7E-15 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_320 6d46d2f32b567638cd7e5bc0d570fae8 183 SUPERFAMILY SSF49401 30 183 4.32E-14 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_320 6d46d2f32b567638cd7e5bc0d570fae8 183 Gene3D G3DSA:2.60.40.1090 28 182 2.7E-15 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_2564 6a961dc0f4005cddca05e619bcbdccef 172 Gene3D G3DSA:3.30.420.10 2 170 2.8E-15 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CH53_2564 6a961dc0f4005cddca05e619bcbdccef 172 SUPERFAMILY SSF53098 9 166 1.39E-30 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_2564 6a961dc0f4005cddca05e619bcbdccef 172 Pfam PF13683 Integrase core domain 97 162 3.0E-20 T 18-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CH53_3327 9e10f2639abea757743077342c917c60 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 2.3E-114 T 18-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CH53_3327 9e10f2639abea757743077342c917c60 258 Gene3D G3DSA:3.20.20.70 1 258 1.6E-91 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3327 9e10f2639abea757743077342c917c60 258 SUPERFAMILY SSF51366 1 257 1.96E-72 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CH53_3327 9e10f2639abea757743077342c917c60 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.08 T 18-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CH53_3327 9e10f2639abea757743077342c917c60 258 Pfam PF00977 Histidine biosynthesis protein 5 239 1.6E-76 T 18-10-2018 IPR006062 Histidine biosynthesis GO:0000105 CH53_1804 bba67bcb6d92655654ccd9b2a3636757 216 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 12 195 1.9E-73 T 18-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CH53_1804 bba67bcb6d92655654ccd9b2a3636757 216 Pfam PF01926 50S ribosome-binding GTPase 30 148 3.9E-20 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_1804 bba67bcb6d92655654ccd9b2a3636757 216 SUPERFAMILY SSF52540 19 204 2.23E-36 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1804 bba67bcb6d92655654ccd9b2a3636757 216 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 199 27.644 T 18-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CH53_1804 bba67bcb6d92655654ccd9b2a3636757 216 Gene3D G3DSA:3.40.50.300 4 205 4.4E-58 T 18-10-2018 CH53_506 45b6ea6176c686ed89f3e5d822702d98 294 Gene3D G3DSA:3.40.190.290 94 265 1.0E-20 T 18-10-2018 CH53_506 45b6ea6176c686ed89f3e5d822702d98 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.7E-17 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_506 45b6ea6176c686ed89f3e5d822702d98 294 Pfam PF03466 LysR substrate binding domain 89 284 1.2E-25 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_506 45b6ea6176c686ed89f3e5d822702d98 294 Gene3D G3DSA:1.10.10.10 1 85 2.7E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_506 45b6ea6176c686ed89f3e5d822702d98 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.4E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_506 45b6ea6176c686ed89f3e5d822702d98 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.4E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_506 45b6ea6176c686ed89f3e5d822702d98 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.4E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_506 45b6ea6176c686ed89f3e5d822702d98 294 SUPERFAMILY SSF53850 90 285 1.36E-30 T 18-10-2018 CH53_506 45b6ea6176c686ed89f3e5d822702d98 294 SUPERFAMILY SSF46785 6 83 2.72E-19 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1688 782b8fc938214c8bd7822c7ba0617935 118 Gene3D G3DSA:4.10.860.10 1 58 3.1E-13 T 18-10-2018 CH53_1688 782b8fc938214c8bd7822c7ba0617935 118 Pfam PF10928 Protein of unknown function (DUF2810) 64 116 8.1E-33 T 18-10-2018 IPR021230 Protein of unknown function DUF2810 CH53_1688 782b8fc938214c8bd7822c7ba0617935 118 Gene3D G3DSA:3.30.1370.150 59 118 1.1E-34 T 18-10-2018 CH53_4274 c7d7d5dc03699fe8dff783f4ee64704a 293 Pfam PF01435 Peptidase family M48 74 288 1.7E-39 T 18-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CH53_4274 c7d7d5dc03699fe8dff783f4ee64704a 293 Gene3D G3DSA:3.30.2010.10 64 157 2.7E-37 T 18-10-2018 CH53_4274 c7d7d5dc03699fe8dff783f4ee64704a 293 Hamap MF_00188 Protease HtpX [htpX]. 1 289 26.264 T 18-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 CH53_2371 05ff4b73c72b58c46e842a4d5e281df9 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 397 5.0E-112 T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CH53_2371 05ff4b73c72b58c46e842a4d5e281df9 403 Gene3D G3DSA:3.40.640.10 7 263 6.1E-70 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_2371 05ff4b73c72b58c46e842a4d5e281df9 403 PIRSF PIRSF001434 1 400 7.4E-114 T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CH53_2371 05ff4b73c72b58c46e842a4d5e281df9 403 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 13 399 1.0E-169 T 18-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 CH53_2371 05ff4b73c72b58c46e842a4d5e281df9 403 SUPERFAMILY SSF53383 28 398 2.27E-89 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_2371 05ff4b73c72b58c46e842a4d5e281df9 403 Gene3D G3DSA:3.90.1150.10 264 400 1.9E-40 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_2371 05ff4b73c72b58c46e842a4d5e281df9 403 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 207 221 - T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CH53_1292 2dfbdb157d1ce23b8e042e0817d884ca 220 SMART SM00862 145 216 2.4E-22 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_1292 2dfbdb157d1ce23b8e042e0817d884ca 220 SUPERFAMILY SSF52172 1 175 1.26E-38 T 18-10-2018 IPR011006 CheY-like superfamily CH53_1292 2dfbdb157d1ce23b8e042e0817d884ca 220 SMART SM00448 1 112 7.6E-37 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1292 2dfbdb157d1ce23b8e042e0817d884ca 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 3.9E-20 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_1292 2dfbdb157d1ce23b8e042e0817d884ca 220 Gene3D G3DSA:1.10.10.10 122 219 1.3E-27 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1292 2dfbdb157d1ce23b8e042e0817d884ca 220 Gene3D G3DSA:3.40.50.2300 1 121 4.9E-39 T 18-10-2018 CH53_1292 2dfbdb157d1ce23b8e042e0817d884ca 220 Pfam PF00072 Response regulator receiver domain 4 113 1.0E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_1322 bd53084efc6d677bd93eb81b196caeca 144 Pfam PF12582 Protein of unknown function (DUF3757) 21 139 1.4E-29 T 18-10-2018 IPR022231 Protein of unknown function DUF3757 CH53_1322 bd53084efc6d677bd93eb81b196caeca 144 ProSitePatterns PS00018 EF-hand calcium-binding domain. 70 82 - T 18-10-2018 IPR018247 EF-Hand 1, calcium-binding site CH53_477 c8bddedb94ffcc9843e045f5a903623f 381 Pfam PF02405 Permease MlaE 165 374 2.9E-67 T 18-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 CH53_477 c8bddedb94ffcc9843e045f5a903623f 381 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 138 377 5.4E-72 T 18-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CH53_4270 27ac69bd74cf3434e3986ac66330bb48 283 Gene3D G3DSA:3.40.80.10 46 196 8.2E-50 T 18-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CH53_4270 27ac69bd74cf3434e3986ac66330bb48 283 Pfam PF01471 Putative peptidoglycan binding domain 219 268 1.4E-7 T 18-10-2018 IPR002477 Peptidoglycan binding-like CH53_4270 27ac69bd74cf3434e3986ac66330bb48 283 SUPERFAMILY SSF55846 28 198 1.96E-53 T 18-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CH53_4270 27ac69bd74cf3434e3986ac66330bb48 283 SMART SM00644 36 182 6.8E-29 T 18-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CH53_4270 27ac69bd74cf3434e3986ac66330bb48 283 SUPERFAMILY SSF47090 201 280 1.55E-22 T 18-10-2018 IPR036365 PGBD-like superfamily CH53_4270 27ac69bd74cf3434e3986ac66330bb48 283 Gene3D G3DSA:1.10.101.10 197 280 3.1E-28 T 18-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 CH53_4270 27ac69bd74cf3434e3986ac66330bb48 283 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 45 183 1.2E-27 T 18-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CH53_2382 699cc7f09f2662ed6d39227cb8affe82 376 Gene3D G3DSA:3.40.50.300 145 332 1.9E-7 T 18-10-2018 CH53_2382 699cc7f09f2662ed6d39227cb8affe82 376 SUPERFAMILY SSF52540 144 332 9.86E-6 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_90 9640873d329a9e39d3dcfd5638fc5c9b 151 Gene3D G3DSA:1.10.10.10 28 132 1.4E-10 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_90 9640873d329a9e39d3dcfd5638fc5c9b 151 Pfam PF00486 Transcriptional regulatory protein, C terminal 47 120 1.9E-7 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_90 9640873d329a9e39d3dcfd5638fc5c9b 151 SUPERFAMILY SSF46894 42 120 5.1E-10 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_90 9640873d329a9e39d3dcfd5638fc5c9b 151 SMART SM00862 42 120 1.2E-4 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_4338 2c187f52af4238bd8c9acbec4809cbaa 76 Pfam PF06440 DNA polymerase III, theta subunit 3 71 1.9E-36 T 18-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_4338 2c187f52af4238bd8c9acbec4809cbaa 76 Gene3D G3DSA:1.20.58.250 1 76 2.1E-35 T 18-10-2018 IPR036745 DNA polymerase III-theta superfamily GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_4338 2c187f52af4238bd8c9acbec4809cbaa 76 SUPERFAMILY SSF46575 1 76 7.72E-34 T 18-10-2018 CH53_4338 2c187f52af4238bd8c9acbec4809cbaa 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 4 76 4.0E-31 T 18-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CH53_4157 113f1527cffd790422a58be09808b994 423 SUPERFAMILY SSF54060 34 119 1.0E-19 T 18-10-2018 CH53_4157 113f1527cffd790422a58be09808b994 423 Pfam PF02498 BRO family, N-terminal domain 263 350 9.6E-18 T 18-10-2018 IPR003497 BRO N-terminal domain CH53_4157 113f1527cffd790422a58be09808b994 423 SMART SM01040 262 350 7.2E-34 T 18-10-2018 IPR003497 BRO N-terminal domain CH53_4157 113f1527cffd790422a58be09808b994 423 Pfam PF13392 HNH endonuclease 60 106 4.6E-8 T 18-10-2018 IPR003615 HNH nuclease CH53_808 07fd86370eb95601fc25c95626e47ba0 82 Pfam PF00886 Ribosomal protein S16 8 68 8.9E-24 T 18-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_808 07fd86370eb95601fc25c95626e47ba0 82 SUPERFAMILY SSF54565 1 76 2.62E-28 T 18-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_808 07fd86370eb95601fc25c95626e47ba0 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.1E-28 T 18-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_808 07fd86370eb95601fc25c95626e47ba0 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.849 T 18-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_808 07fd86370eb95601fc25c95626e47ba0 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 18-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_808 07fd86370eb95601fc25c95626e47ba0 82 Gene3D G3DSA:3.30.1320.10 1 81 3.4E-30 T 18-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_4101 3be08f81411ce42a85f557e6b1aeb0c1 413 Gene3D G3DSA:1.20.1720.10 7 381 7.0E-80 T 18-10-2018 CH53_4101 3be08f81411ce42a85f557e6b1aeb0c1 413 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 383 8.0E-109 T 18-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 CH53_4101 3be08f81411ce42a85f557e6b1aeb0c1 413 SUPERFAMILY SSF103473 8 394 1.07E-57 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_4101 3be08f81411ce42a85f557e6b1aeb0c1 413 Pfam PF07690 Major Facilitator Superfamily 14 344 1.3E-38 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_355 0aec067d135f3cd9f2e4f5345a1843fd 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.75 T 18-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CH53_355 0aec067d135f3cd9f2e4f5345a1843fd 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 1.5E-79 T 18-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CH53_355 0aec067d135f3cd9f2e4f5345a1843fd 285 SUPERFAMILY SSF52096 18 280 1.57E-78 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CH53_355 0aec067d135f3cd9f2e4f5345a1843fd 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 1.0E-150 T 18-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CH53_355 0aec067d135f3cd9f2e4f5345a1843fd 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 18-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CH53_355 0aec067d135f3cd9f2e4f5345a1843fd 285 Gene3D G3DSA:3.90.226.10 1 222 4.6E-86 T 18-10-2018 CH53_355 0aec067d135f3cd9f2e4f5345a1843fd 285 Gene3D G3DSA:1.10.12.10 223 273 2.4E-31 T 18-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CH53_4344 542c36c56b0f691ea0ffdddac1b73b62 102 PIRSF PIRSF029143 1 102 8.1E-49 T 18-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 CH53_4344 542c36c56b0f691ea0ffdddac1b73b62 102 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 1 102 31.651 T 18-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 CH53_4344 542c36c56b0f691ea0ffdddac1b73b62 102 Pfam PF04266 ASCH domain 6 98 1.1E-13 T 18-10-2018 IPR007374 ASCH domain CH53_4344 542c36c56b0f691ea0ffdddac1b73b62 102 Gene3D G3DSA:2.30.130.30 1 102 2.5E-43 T 18-10-2018 CH53_4344 542c36c56b0f691ea0ffdddac1b73b62 102 SMART SM01022 5 101 8.4E-25 T 18-10-2018 IPR007374 ASCH domain CH53_4344 542c36c56b0f691ea0ffdddac1b73b62 102 SUPERFAMILY SSF88697 2 100 6.46E-33 T 18-10-2018 IPR015947 PUA-like superfamily CH53_1672 752b82188d7497c8c7d6314857264be7 330 Pfam PF01757 Acyltransferase family 6 318 2.0E-31 T 18-10-2018 IPR002656 Acyltransferase 3 GO:0016747 CH53_1672 752b82188d7497c8c7d6314857264be7 330 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 330 39.813 T 18-10-2018 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 CH53_893 73f54205f99ae7a5a494d1708ab2f09d 221 Pfam PF01323 DSBA-like thioredoxin domain 102 194 4.7E-6 T 18-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CH53_893 73f54205f99ae7a5a494d1708ab2f09d 221 SUPERFAMILY SSF52833 52 198 1.22E-18 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_893 73f54205f99ae7a5a494d1708ab2f09d 221 Gene3D G3DSA:3.40.30.10 27 215 3.9E-22 T 18-10-2018 CH53_431 4d644f696bea0ea4e3e34fea38a7fe76 180 Pfam PF04315 Elongation factor P hydroxylase 11 169 3.0E-79 T 18-10-2018 IPR007411 Elongation factor P hydroxylase CH53_3074 b2d5c4b741ee75a49c42f8e06e283677 224 SUPERFAMILY SSF161098 14 209 3.79E-38 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3074 b2d5c4b741ee75a49c42f8e06e283677 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 5.3E-24 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CH53_3074 b2d5c4b741ee75a49c42f8e06e283677 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 6.0E-16 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_3074 b2d5c4b741ee75a49c42f8e06e283677 224 Gene3D G3DSA:1.10.3720.10 2 224 3.2E-49 T 18-10-2018 IPR035906 MetI-like superfamily CH53_4414 d7557f5fc6cb1a226ac9dfd20911d48f 400 Pfam PF12704 MacB-like periplasmic core domain 27 209 7.1E-11 T 18-10-2018 IPR025857 MacB-like periplasmic core domain CH53_4414 d7557f5fc6cb1a226ac9dfd20911d48f 400 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 400 8.9E-138 T 18-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CH53_4414 d7557f5fc6cb1a226ac9dfd20911d48f 400 Pfam PF02687 FtsX-like permease family 297 393 2.5E-12 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CH53_3939 3bd0b20c8321a2f5b0239348cb39e191 707 Pfam PF00005 ABC transporter 479 628 9.3E-32 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3939 3bd0b20c8321a2f5b0239348cb39e191 707 Gene3D G3DSA:1.20.1560.10 135 449 2.0E-69 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_3939 3bd0b20c8321a2f5b0239348cb39e191 707 SUPERFAMILY SSF90123 135 453 6.02E-62 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_3939 3bd0b20c8321a2f5b0239348cb39e191 707 ProSitePatterns PS00211 ABC transporters family signature. 600 614 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3939 3bd0b20c8321a2f5b0239348cb39e191 707 SMART SM00382 488 676 8.2E-18 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3939 3bd0b20c8321a2f5b0239348cb39e191 707 Gene3D G3DSA:3.90.70.10 7 134 1.1E-10 T 18-10-2018 CH53_3939 3bd0b20c8321a2f5b0239348cb39e191 707 Pfam PF00664 ABC transporter transmembrane region 151 418 3.6E-52 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CH53_3939 3bd0b20c8321a2f5b0239348cb39e191 707 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 55 700 8.5E-225 T 18-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 CH53_3939 3bd0b20c8321a2f5b0239348cb39e191 707 Gene3D G3DSA:3.40.50.300 455 706 1.4E-84 T 18-10-2018 CH53_3939 3bd0b20c8321a2f5b0239348cb39e191 707 SUPERFAMILY SSF52540 455 698 1.22E-82 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3331 e192564bebb3127fe2335e2d49b332af 374 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 353 4.1E-122 T 18-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CH53_3331 e192564bebb3127fe2335e2d49b332af 374 Pfam PF00155 Aminotransferase class I and II 47 352 2.2E-62 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_3331 e192564bebb3127fe2335e2d49b332af 374 SUPERFAMILY SSF53383 6 353 6.65E-80 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_3331 e192564bebb3127fe2335e2d49b332af 374 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 212 221 - T 18-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 CH53_3331 e192564bebb3127fe2335e2d49b332af 374 Gene3D G3DSA:3.90.1150.10 10 348 1.6E-133 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_3331 e192564bebb3127fe2335e2d49b332af 374 Gene3D G3DSA:3.40.640.10 55 259 1.6E-133 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_3331 e192564bebb3127fe2335e2d49b332af 374 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 356 55.163 T 18-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CH53_3380 fc4f23896e219be1b376f589ba4f0966 241 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 208 4.6E-37 T 18-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CH53_3380 fc4f23896e219be1b376f589ba4f0966 241 Gene3D G3DSA:3.40.1010.10 1 110 6.6E-29 T 18-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CH53_3380 fc4f23896e219be1b376f589ba4f0966 241 SUPERFAMILY SSF53790 1 239 8.9E-56 T 18-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CH53_3380 fc4f23896e219be1b376f589ba4f0966 241 Gene3D G3DSA:3.30.950.10 111 241 3.0E-53 T 18-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CH53_3380 fc4f23896e219be1b376f589ba4f0966 241 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 2 239 6.7E-105 T 18-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 CH53_1494 8fe87bc8d61e31dd523adc4cb6199cb6 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.6E-65 T 18-10-2018 IPR023798 Ribosomal protein S7 domain CH53_1494 8fe87bc8d61e31dd523adc4cb6199cb6 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 18-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1494 8fe87bc8d61e31dd523adc4cb6199cb6 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.144 T 18-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CH53_1494 8fe87bc8d61e31dd523adc4cb6199cb6 156 Gene3D G3DSA:1.10.455.10 2 155 5.6E-64 T 18-10-2018 IPR036823 Ribosomal protein S7 domain superfamily CH53_1494 8fe87bc8d61e31dd523adc4cb6199cb6 156 SUPERFAMILY SSF47973 6 149 7.59E-60 T 18-10-2018 IPR036823 Ribosomal protein S7 domain superfamily CH53_1494 8fe87bc8d61e31dd523adc4cb6199cb6 156 PIRSF PIRSF002122 3 156 2.3E-63 T 18-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 CH53_1494 8fe87bc8d61e31dd523adc4cb6199cb6 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.4E-71 T 18-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CH53_1454 558f25e607d2a6bee0b9b528105f67e5 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.528 T 18-10-2018 IPR023635 Peptide deformylase CH53_1454 558f25e607d2a6bee0b9b528105f67e5 170 PIRSF PIRSF004749 1 169 2.2E-55 T 18-10-2018 IPR023635 Peptide deformylase CH53_1454 558f25e607d2a6bee0b9b528105f67e5 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.8E-65 T 18-10-2018 IPR023635 Peptide deformylase CH53_1454 558f25e607d2a6bee0b9b528105f67e5 170 Gene3D G3DSA:3.90.45.10 2 169 1.9E-67 T 18-10-2018 IPR036821 Peptide deformylase superfamily CH53_1454 558f25e607d2a6bee0b9b528105f67e5 170 SUPERFAMILY SSF56420 3 165 2.22E-62 T 18-10-2018 IPR036821 Peptide deformylase superfamily CH53_1454 558f25e607d2a6bee0b9b528105f67e5 170 PRINTS PR01576 Peptide deformylase signature 120 149 3.1E-38 T 18-10-2018 IPR023635 Peptide deformylase CH53_1454 558f25e607d2a6bee0b9b528105f67e5 170 PRINTS PR01576 Peptide deformylase signature 101 119 3.1E-38 T 18-10-2018 IPR023635 Peptide deformylase CH53_1454 558f25e607d2a6bee0b9b528105f67e5 170 PRINTS PR01576 Peptide deformylase signature 33 62 3.1E-38 T 18-10-2018 IPR023635 Peptide deformylase CH53_1454 558f25e607d2a6bee0b9b528105f67e5 170 PRINTS PR01576 Peptide deformylase signature 89 100 3.1E-38 T 18-10-2018 IPR023635 Peptide deformylase CH53_1454 558f25e607d2a6bee0b9b528105f67e5 170 Pfam PF01327 Polypeptide deformylase 4 152 4.2E-50 T 18-10-2018 IPR023635 Peptide deformylase CH53_1125 3d8174a4febf6457c1e517fecb09dc8d 147 Gene3D G3DSA:3.40.630.30 1 147 2.4E-46 T 18-10-2018 CH53_1125 3d8174a4febf6457c1e517fecb09dc8d 147 SUPERFAMILY SSF55729 3 145 3.71E-32 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_1125 3d8174a4febf6457c1e517fecb09dc8d 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 142 2.7E-44 T 18-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 CH53_1125 3d8174a4febf6457c1e517fecb09dc8d 147 Pfam PF00583 Acetyltransferase (GNAT) family 16 120 6.2E-17 T 18-10-2018 IPR000182 GNAT domain CH53_1989 3c6deda6e3cd42488bc53d57e8163905 399 Pfam PF07219 HemY protein N-terminus 26 132 1.1E-34 T 18-10-2018 IPR010817 HemY, N-terminal CH53_1989 3c6deda6e3cd42488bc53d57e8163905 399 SUPERFAMILY SSF48452 128 388 5.58E-8 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1989 3c6deda6e3cd42488bc53d57e8163905 399 Gene3D G3DSA:1.25.40.10 155 396 6.6E-11 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1989 3c6deda6e3cd42488bc53d57e8163905 399 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 386 1.5E-135 T 18-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 CH53_57 6bd21049eae395b28c7b506135157041 300 SUPERFAMILY SSF53633 1 298 1.85E-71 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CH53_57 6bd21049eae395b28c7b506135157041 300 Pfam PF00696 Amino acid kinase family 3 280 1.0E-26 T 18-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CH53_57 6bd21049eae395b28c7b506135157041 300 PIRSF PIRSF000723 1 300 9.3E-104 T 18-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CH53_57 6bd21049eae395b28c7b506135157041 300 TIGRFAM TIGR00746 arcC: carbamate kinase 3 299 2.8E-112 T 18-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CH53_57 6bd21049eae395b28c7b506135157041 300 PRINTS PR01469 Bacterial carbamate kinase signature 204 219 6.0E-57 T 18-10-2018 CH53_57 6bd21049eae395b28c7b506135157041 300 PRINTS PR01469 Bacterial carbamate kinase signature 174 192 6.0E-57 T 18-10-2018 CH53_57 6bd21049eae395b28c7b506135157041 300 PRINTS PR01469 Bacterial carbamate kinase signature 72 90 6.0E-57 T 18-10-2018 CH53_57 6bd21049eae395b28c7b506135157041 300 PRINTS PR01469 Bacterial carbamate kinase signature 103 122 6.0E-57 T 18-10-2018 CH53_57 6bd21049eae395b28c7b506135157041 300 PRINTS PR01469 Bacterial carbamate kinase signature 42 61 6.0E-57 T 18-10-2018 CH53_57 6bd21049eae395b28c7b506135157041 300 PRINTS PR01469 Bacterial carbamate kinase signature 151 170 6.0E-57 T 18-10-2018 CH53_57 6bd21049eae395b28c7b506135157041 300 PRINTS PR01469 Bacterial carbamate kinase signature 255 270 6.0E-57 T 18-10-2018 CH53_57 6bd21049eae395b28c7b506135157041 300 Gene3D G3DSA:3.40.1160.10 1 300 2.1E-102 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CH53_1633 9de5b0e8e0bce9410b4773bcdbfd0dac 379 Gene3D G3DSA:1.50.10.10 23 367 1.2E-138 T 18-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 CH53_1633 9de5b0e8e0bce9410b4773bcdbfd0dac 379 PRINTS PR00735 Glycosyl hydrolase family 8 signature 115 133 4.6E-21 T 18-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CH53_1633 9de5b0e8e0bce9410b4773bcdbfd0dac 379 PRINTS PR00735 Glycosyl hydrolase family 8 signature 216 227 4.6E-21 T 18-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CH53_1633 9de5b0e8e0bce9410b4773bcdbfd0dac 379 PRINTS PR00735 Glycosyl hydrolase family 8 signature 180 197 4.6E-21 T 18-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CH53_1633 9de5b0e8e0bce9410b4773bcdbfd0dac 379 PRINTS PR00735 Glycosyl hydrolase family 8 signature 53 66 4.6E-21 T 18-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CH53_1633 9de5b0e8e0bce9410b4773bcdbfd0dac 379 PRINTS PR00735 Glycosyl hydrolase family 8 signature 338 352 4.6E-21 T 18-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CH53_1633 9de5b0e8e0bce9410b4773bcdbfd0dac 379 PRINTS PR00735 Glycosyl hydrolase family 8 signature 241 250 4.6E-21 T 18-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CH53_1633 9de5b0e8e0bce9410b4773bcdbfd0dac 379 SUPERFAMILY SSF48208 3 357 7.94E-104 T 18-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 CH53_1633 9de5b0e8e0bce9410b4773bcdbfd0dac 379 Pfam PF01270 Glycosyl hydrolases family 8 7 352 1.5E-97 T 18-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CH53_1109 05dfed5fb335145a76c6229f74e48afb 333 SUPERFAMILY SSF51735 117 282 7.59E-32 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1109 05dfed5fb335145a76c6229f74e48afb 333 SUPERFAMILY SSF50129 5 151 4.57E-31 T 18-10-2018 IPR011032 GroES-like superfamily CH53_1109 05dfed5fb335145a76c6229f74e48afb 333 Pfam PF13602 Zinc-binding dehydrogenase 192 331 4.0E-18 T 18-10-2018 CH53_1109 05dfed5fb335145a76c6229f74e48afb 333 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 12 331 7.1E-116 T 18-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 CH53_1109 05dfed5fb335145a76c6229f74e48afb 333 SMART SM00829 14 331 9.3E-11 T 18-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CH53_1109 05dfed5fb335145a76c6229f74e48afb 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 89 2.0E-8 T 18-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CH53_1109 05dfed5fb335145a76c6229f74e48afb 333 Gene3D G3DSA:3.90.180.10 26 330 3.7E-94 T 18-10-2018 CH53_1109 05dfed5fb335145a76c6229f74e48afb 333 Gene3D G3DSA:3.40.50.720 127 272 3.7E-94 T 18-10-2018 CH53_4136 f1ad54829dbc16094a12a2c028fc4aa4 252 SUPERFAMILY SSF52540 14 227 9.82E-46 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4136 f1ad54829dbc16094a12a2c028fc4aa4 252 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 2 250 44.125 T 18-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 CH53_4136 f1ad54829dbc16094a12a2c028fc4aa4 252 SMART SM00382 23 212 3.8E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_4136 f1ad54829dbc16094a12a2c028fc4aa4 252 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_4136 f1ad54829dbc16094a12a2c028fc4aa4 252 Pfam PF00005 ABC transporter 17 163 2.3E-19 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_4136 f1ad54829dbc16094a12a2c028fc4aa4 252 Gene3D G3DSA:3.40.50.300 1 250 3.3E-53 T 18-10-2018 CH53_2147 616adc624b7fb922b1ab85927a695814 168 SUPERFAMILY SSF64288 9 166 4.4E-51 T 18-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CH53_2147 616adc624b7fb922b1ab85927a695814 168 Gene3D G3DSA:3.40.1410.10 5 166 3.3E-52 T 18-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CH53_2147 616adc624b7fb922b1ab85927a695814 168 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 166 26.265 T 18-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 CH53_2147 616adc624b7fb922b1ab85927a695814 168 Pfam PF04345 Chorismate lyase 12 167 5.2E-34 T 18-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 CH53_611 fc5986531615c9bab7afed337f859a40 121 PIRSF PIRSF011474 2 121 1.4E-38 T 18-10-2018 IPR009693 Glucitol operon activator CH53_611 fc5986531615c9bab7afed337f859a40 121 Pfam PF06923 Glucitol operon activator protein (GutM) 7 113 4.1E-36 T 18-10-2018 IPR009693 Glucitol operon activator CH53_3588 544fb3af164c8a7d520ee92d070d52be 132 SUPERFAMILY SSF101116 8 130 7.06E-41 T 18-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 CH53_3588 544fb3af164c8a7d520ee92d070d52be 132 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 125 7.4E-39 T 18-10-2018 IPR003713 Flagellar protein FliS GO:0044780 CH53_3588 544fb3af164c8a7d520ee92d070d52be 132 Gene3D G3DSA:1.20.120.340 1 128 3.1E-42 T 18-10-2018 CH53_3588 544fb3af164c8a7d520ee92d070d52be 132 PIRSF PIRSF039090 1 132 8.9E-43 T 18-10-2018 IPR003713 Flagellar protein FliS GO:0044780 CH53_3588 544fb3af164c8a7d520ee92d070d52be 132 Pfam PF02561 Flagellar protein FliS 8 125 7.2E-40 T 18-10-2018 IPR003713 Flagellar protein FliS GO:0044780 CH53_1674 09e83df11d81deee97064bb508abd7df 409 Pfam PF07690 Major Facilitator Superfamily 25 361 1.1E-32 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_1674 09e83df11d81deee97064bb508abd7df 409 SUPERFAMILY SSF103473 7 401 1.18E-51 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_1674 09e83df11d81deee97064bb508abd7df 409 Gene3D G3DSA:1.20.1720.10 19 402 1.9E-64 T 18-10-2018 CH53_1597 a8febd1962d485e8948018da00ab0e51 274 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 19 264 5.2E-99 T 18-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 CH53_1597 a8febd1962d485e8948018da00ab0e51 274 Gene3D G3DSA:2.60.120.10 15 122 4.4E-38 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_1597 a8febd1962d485e8948018da00ab0e51 274 PIRSF PIRSF036628 1 270 2.5E-109 T 18-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 CH53_1597 a8febd1962d485e8948018da00ab0e51 274 SUPERFAMILY SSF51182 16 253 6.23E-66 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_1597 a8febd1962d485e8948018da00ab0e51 274 Gene3D G3DSA:2.60.120.10 123 271 1.4E-61 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_1597 a8febd1962d485e8948018da00ab0e51 274 Pfam PF04962 KduI/IolB family 7 264 1.4E-108 T 18-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CH53_179 9deb03a98db4be7c2524920bc9ec5c4e 370 Gene3D G3DSA:2.40.50.100 60 222 3.3E-89 T 18-10-2018 CH53_179 9deb03a98db4be7c2524920bc9ec5c4e 370 Gene3D G3DSA:2.40.420.20 45 362 3.3E-89 T 18-10-2018 CH53_179 9deb03a98db4be7c2524920bc9ec5c4e 370 Gene3D G3DSA:1.10.287.470 94 185 3.3E-89 T 18-10-2018 CH53_179 9deb03a98db4be7c2524920bc9ec5c4e 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 294 5.0E-22 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH53_179 9deb03a98db4be7c2524920bc9ec5c4e 370 Gene3D G3DSA:2.40.30.170 49 301 3.3E-89 T 18-10-2018 CH53_179 9deb03a98db4be7c2524920bc9ec5c4e 370 SUPERFAMILY SSF111369 52 298 3.4E-29 T 18-10-2018 CH53_179 9deb03a98db4be7c2524920bc9ec5c4e 370 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 363 1.1E-60 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CH53_4084 c34d1fbd43553869b2b23cb7c9694ef8 143 Gene3D G3DSA:1.10.10.10 1 143 1.2E-36 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4084 c34d1fbd43553869b2b23cb7c9694ef8 143 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 1 143 37.558 T 18-10-2018 IPR023071 Transcriptional regulator, SlyA CH53_4084 c34d1fbd43553869b2b23cb7c9694ef8 143 SUPERFAMILY SSF46785 4 139 4.45E-32 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_4084 c34d1fbd43553869b2b23cb7c9694ef8 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 8.8E-27 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CH53_4084 c34d1fbd43553869b2b23cb7c9694ef8 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 8.8E-27 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CH53_4084 c34d1fbd43553869b2b23cb7c9694ef8 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 8.8E-27 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CH53_4084 c34d1fbd43553869b2b23cb7c9694ef8 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 8.8E-27 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CH53_4084 c34d1fbd43553869b2b23cb7c9694ef8 143 Pfam PF01047 MarR family 29 87 5.2E-17 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CH53_4084 c34d1fbd43553869b2b23cb7c9694ef8 143 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 18-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CH53_4084 c34d1fbd43553869b2b23cb7c9694ef8 143 SMART SM00347 22 123 2.2E-26 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CH53_4237 005f9af1fd6f170cfdd05e88ea56aaef 283 SUPERFAMILY SSF63829 6 281 8.5E-57 T 18-10-2018 CH53_4237 005f9af1fd6f170cfdd05e88ea56aaef 283 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 147 169 6.8E-10 T 18-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) CH53_4237 005f9af1fd6f170cfdd05e88ea56aaef 283 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 17 34 6.8E-10 T 18-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) CH53_4237 005f9af1fd6f170cfdd05e88ea56aaef 283 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 253 271 6.8E-10 T 18-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) CH53_4237 005f9af1fd6f170cfdd05e88ea56aaef 283 Gene3D G3DSA:2.120.10.30 1 280 8.7E-98 T 18-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CH53_4237 005f9af1fd6f170cfdd05e88ea56aaef 283 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 16 271 3.4E-46 T 18-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region CH53_3178 a00483b57ea27fe80862683a4a84dbe1 259 PIRSF PIRSF004846 1 259 2.8E-78 T 18-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 CH53_3178 a00483b57ea27fe80862683a4a84dbe1 259 SUPERFAMILY SSF53850 30 258 8.69E-69 T 18-10-2018 CH53_3178 a00483b57ea27fe80862683a4a84dbe1 259 Gene3D G3DSA:3.40.190.10 109 220 7.8E-87 T 18-10-2018 CH53_3178 a00483b57ea27fe80862683a4a84dbe1 259 Pfam PF13531 Bacterial extracellular solute-binding protein 31 256 2.7E-47 T 18-10-2018 CH53_3178 a00483b57ea27fe80862683a4a84dbe1 259 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 36 255 2.8E-80 T 18-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 CH53_3178 a00483b57ea27fe80862683a4a84dbe1 259 Gene3D G3DSA:3.40.190.10 32 256 7.8E-87 T 18-10-2018 CH53_3451 390e4675101ff8295be29ae64e9289ac 323 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 323 193.003 T 18-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CH53_3451 390e4675101ff8295be29ae64e9289ac 323 Gene3D G3DSA:1.10.4200.10 51 300 8.8E-7 T 18-10-2018 CH53_3451 390e4675101ff8295be29ae64e9289ac 323 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 24 298 1.2E-103 T 18-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CH53_3451 390e4675101ff8295be29ae64e9289ac 323 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 27 297 8.0E-83 T 18-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CH53_3693 106757858e6f51026f30f7465af62b1d 89 Gene3D G3DSA:3.40.50.720 4 86 4.9E-12 T 18-10-2018 CH53_3693 106757858e6f51026f30f7465af62b1d 89 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 11 24 - T 18-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CH53_3693 106757858e6f51026f30f7465af62b1d 89 SUPERFAMILY SSF51735 9 72 2.36E-10 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3693 106757858e6f51026f30f7465af62b1d 89 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 76 1.5E-9 T 18-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 CH53_3701 2388fa1ec3151682365c06df87d879ec 466 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 360 368 - T 18-10-2018 IPR018120 Glycoside hydrolase family 1, active site CH53_3701 2388fa1ec3151682365c06df87d879ec 466 Gene3D G3DSA:3.20.20.80 3 458 8.4E-150 T 18-10-2018 CH53_3701 2388fa1ec3151682365c06df87d879ec 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 7.8E-15 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_3701 2388fa1ec3151682365c06df87d879ec 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 404 421 7.8E-15 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_3701 2388fa1ec3151682365c06df87d879ec 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 7.8E-15 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_3701 2388fa1ec3151682365c06df87d879ec 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 428 440 7.8E-15 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_3701 2388fa1ec3151682365c06df87d879ec 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 383 394 7.8E-15 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_3701 2388fa1ec3151682365c06df87d879ec 466 SUPERFAMILY SSF51445 1 451 1.39E-157 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_3701 2388fa1ec3151682365c06df87d879ec 466 Pfam PF00232 Glycosyl hydrolase family 1 2 458 4.9E-129 T 18-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CH53_1418 984f183a87b49b0277d3f7f05b506525 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 97 112 5.3E-19 T 18-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CH53_1418 984f183a87b49b0277d3f7f05b506525 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 77 90 5.3E-19 T 18-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CH53_1418 984f183a87b49b0277d3f7f05b506525 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 164 176 5.3E-19 T 18-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CH53_1418 984f183a87b49b0277d3f7f05b506525 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 25 35 5.3E-19 T 18-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CH53_1418 984f183a87b49b0277d3f7f05b506525 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 117 130 5.3E-19 T 18-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CH53_1418 984f183a87b49b0277d3f7f05b506525 243 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 5 192 1.3E-72 T 18-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CH53_1418 984f183a87b49b0277d3f7f05b506525 243 Gene3D G3DSA:3.30.70.1530 21 91 1.4E-27 T 18-10-2018 CH53_1418 984f183a87b49b0277d3f7f05b506525 243 Pfam PF01514 Secretory protein of YscJ/FliF family 9 191 2.2E-26 T 18-10-2018 IPR006182 Secretory protein YscJ/FliF CH53_1418 984f183a87b49b0277d3f7f05b506525 243 Gene3D G3DSA:3.30.300.30 98 192 5.7E-34 T 18-10-2018 CH53_3133 678fc8657ba6fc9cbb9fdd4b10904434 245 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 42.501 T 18-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 CH53_3133 678fc8657ba6fc9cbb9fdd4b10904434 245 Pfam PF03746 LamB/YcsF family 3 235 7.7E-93 T 18-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 CH53_3133 678fc8657ba6fc9cbb9fdd4b10904434 245 Gene3D G3DSA:3.20.20.370 1 245 5.9E-100 T 18-10-2018 CH53_3133 678fc8657ba6fc9cbb9fdd4b10904434 245 SUPERFAMILY SSF88713 1 243 1.41E-91 T 18-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CH53_2460 f21f8ebd6f395c31530bff1128422d7a 348 Gene3D G3DSA:3.30.470.20 35 345 2.4E-47 T 18-10-2018 CH53_2460 f21f8ebd6f395c31530bff1128422d7a 348 SUPERFAMILY SSF56059 21 254 1.29E-31 T 18-10-2018 CH53_2460 f21f8ebd6f395c31530bff1128422d7a 348 Pfam PF13535 ATP-grasp domain 79 227 5.5E-15 T 18-10-2018 CH53_399 af2e75698e6c9c9dc14ce8cc594004f2 230 Pfam PF00563 EAL domain 13 217 5.5E-16 T 18-10-2018 IPR001633 EAL domain CH53_399 af2e75698e6c9c9dc14ce8cc594004f2 230 SUPERFAMILY SSF141868 11 224 1.31E-21 T 18-10-2018 IPR035919 EAL domain superfamily CH53_399 af2e75698e6c9c9dc14ce8cc594004f2 230 SMART SM00052 1 223 6.3E-6 T 18-10-2018 IPR001633 EAL domain CH53_399 af2e75698e6c9c9dc14ce8cc594004f2 230 Gene3D G3DSA:3.20.20.450 1 227 1.7E-43 T 18-10-2018 IPR035919 EAL domain superfamily CH53_3900 2f652503f835a275450f82b3e0fbe3d9 316 Gene3D G3DSA:3.20.20.140 35 281 2.0E-80 T 18-10-2018 CH53_3900 2f652503f835a275450f82b3e0fbe3d9 316 SUPERFAMILY SSF89550 33 306 7.65E-51 T 18-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CH53_3900 2f652503f835a275450f82b3e0fbe3d9 316 Gene3D G3DSA:1.10.150.650 129 200 2.0E-80 T 18-10-2018 CH53_3900 2f652503f835a275450f82b3e0fbe3d9 316 SMART SM00481 34 101 4.0E-17 T 18-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CH53_3900 2f652503f835a275450f82b3e0fbe3d9 316 Pfam PF02811 PHP domain 35 210 1.3E-8 T 18-10-2018 IPR004013 PHP domain GO:0003824 CH53_4351 0c63ec24364d7fff776bdb9870d77b3b 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.3E-95 T 18-10-2018 IPR005130 Serine dehydratase-like, alpha subunit CH53_4351 0c63ec24364d7fff776bdb9870d77b3b 454 Pfam PF03315 Serine dehydratase beta chain 3 155 7.9E-56 T 18-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CH53_4351 0c63ec24364d7fff776bdb9870d77b3b 454 SUPERFAMILY SSF143548 16 158 1.49E-45 T 18-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 CH53_4351 0c63ec24364d7fff776bdb9870d77b3b 454 Gene3D G3DSA:3.30.1330.90 10 159 1.6E-51 T 18-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 CH53_4351 0c63ec24364d7fff776bdb9870d77b3b 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 7.2E-224 T 18-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CH53_4196 e8df17fecf593e21fd37a1d550945f97 445 SMART SM00382 188 383 3.8E-5 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_4196 e8df17fecf593e21fd37a1d550945f97 445 Gene3D G3DSA:1.10.860.10 1 112 3.0E-11 T 18-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CH53_4196 e8df17fecf593e21fd37a1d550945f97 445 Gene3D G3DSA:3.40.50.300 147 426 8.8E-72 T 18-10-2018 CH53_4196 e8df17fecf593e21fd37a1d550945f97 445 SUPERFAMILY SSF48024 3 102 2.09E-11 T 18-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 CH53_4196 e8df17fecf593e21fd37a1d550945f97 445 Pfam PF00772 DnaB-like helicase N terminal domain 3 95 5.4E-9 T 18-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CH53_4196 e8df17fecf593e21fd37a1d550945f97 445 SUPERFAMILY SSF52540 172 414 3.55E-38 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4196 e8df17fecf593e21fd37a1d550945f97 445 Pfam PF03796 DnaB-like helicase C terminal domain 172 416 2.1E-65 T 18-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CH53_3264 cb79db956558a1bc6c62b79446d07799 384 Pfam PF00107 Zinc-binding dehydrogenase 200 327 1.1E-24 T 18-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CH53_3264 cb79db956558a1bc6c62b79446d07799 384 SUPERFAMILY SSF51735 163 337 8.85E-50 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3264 cb79db956558a1bc6c62b79446d07799 384 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 18-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CH53_3264 cb79db956558a1bc6c62b79446d07799 384 Gene3D G3DSA:3.40.50.720 177 315 2.2E-156 T 18-10-2018 CH53_3264 cb79db956558a1bc6c62b79446d07799 384 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 5 372 2.6E-225 T 18-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 CH53_3264 cb79db956558a1bc6c62b79446d07799 384 Gene3D G3DSA:3.90.180.10 9 367 2.2E-156 T 18-10-2018 CH53_3264 cb79db956558a1bc6c62b79446d07799 384 SMART SM00829 13 370 5.1E-4 T 18-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CH53_3264 cb79db956558a1bc6c62b79446d07799 384 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 129 3.6E-25 T 18-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CH53_3264 cb79db956558a1bc6c62b79446d07799 384 SUPERFAMILY SSF50129 321 372 2.26E-12 T 18-10-2018 IPR011032 GroES-like superfamily CH53_3264 cb79db956558a1bc6c62b79446d07799 384 SUPERFAMILY SSF50129 2 190 2.89E-74 T 18-10-2018 IPR011032 GroES-like superfamily CH53_2148 76a20c9e1dadc8f019715048c31faab0 289 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 18-10-2018 IPR030470 UbiA prenyltransferase conserved site CH53_2148 76a20c9e1dadc8f019715048c31faab0 289 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.541 T 18-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CH53_2148 76a20c9e1dadc8f019715048c31faab0 289 Gene3D G3DSA:1.10.357.140 23 183 6.8E-41 T 18-10-2018 CH53_2148 76a20c9e1dadc8f019715048c31faab0 289 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 10 287 3.2E-111 T 18-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CH53_2148 76a20c9e1dadc8f019715048c31faab0 289 Pfam PF01040 UbiA prenyltransferase family 28 270 3.6E-67 T 18-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CH53_3285 233bd58a9ec41b95002e40da6090558c 307 Pfam PF00146 NADH dehydrogenase 9 301 5.1E-50 T 18-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3285 233bd58a9ec41b95002e40da6090558c 307 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 193 206 - T 18-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_213 5db5bc165da947370dc56aa1e8448b7e 254 Pfam PF08220 DeoR-like helix-turn-helix domain 8 57 1.5E-10 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_213 5db5bc165da947370dc56aa1e8448b7e 254 SMART SM00420 8 57 1.7E-8 T 18-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CH53_213 5db5bc165da947370dc56aa1e8448b7e 254 SUPERFAMILY SSF100950 76 238 9.1E-25 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_213 5db5bc165da947370dc56aa1e8448b7e 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 18-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CH53_213 5db5bc165da947370dc56aa1e8448b7e 254 SMART SM01134 75 236 1.6E-59 T 18-10-2018 CH53_213 5db5bc165da947370dc56aa1e8448b7e 254 Pfam PF00455 DeoR C terminal sensor domain 77 235 8.6E-47 T 18-10-2018 IPR014036 DeoR C-terminal sensor domain CH53_4041 a4f1ba5db3bede34af32abd743a6407f 879 Pfam PF11739 Dicarboxylate transport 661 862 1.7E-64 T 18-10-2018 IPR021730 Dicarboxylate transport CH53_2373 49ee03412cb74ab250a9a7d091f4d95e 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 8.1E-30 T 18-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CH53_2373 49ee03412cb74ab250a9a7d091f4d95e 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 16 136 3.8E-64 T 18-10-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0016020|GO:0055085 CH53_2373 49ee03412cb74ab250a9a7d091f4d95e 141 Gene3D G3DSA:3.30.420.270 63 132 1.7E-28 T 18-10-2018 CH53_921 d3f9dc46d677468d6854c61183813c01 589 Pfam PF07693 KAP family P-loop domain 17 379 1.0E-51 T 18-10-2018 IPR011646 KAP family P-loop domain CH53_921 d3f9dc46d677468d6854c61183813c01 589 SUPERFAMILY SSF52540 34 390 1.55E-11 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1008 10a04f1e85b5e98e9e31ea8b6edc520b 128 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 127 2.2E-51 T 18-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CH53_1008 10a04f1e85b5e98e9e31ea8b6edc520b 128 Gene3D G3DSA:3.90.79.10 1 127 1.9E-36 T 18-10-2018 CH53_1008 10a04f1e85b5e98e9e31ea8b6edc520b 128 Pfam PF00293 NUDIX domain 6 124 3.0E-20 T 18-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CH53_1008 10a04f1e85b5e98e9e31ea8b6edc520b 128 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 18-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CH53_1008 10a04f1e85b5e98e9e31ea8b6edc520b 128 SUPERFAMILY SSF55811 2 126 3.25E-36 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CH53_1008 10a04f1e85b5e98e9e31ea8b6edc520b 128 PRINTS PR01401 Mutator MutT protein signature 77 90 2.4E-11 T 18-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CH53_1008 10a04f1e85b5e98e9e31ea8b6edc520b 128 PRINTS PR01401 Mutator MutT protein signature 2 23 2.4E-11 T 18-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CH53_1008 10a04f1e85b5e98e9e31ea8b6edc520b 128 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.0E-8 T 18-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CH53_1008 10a04f1e85b5e98e9e31ea8b6edc520b 128 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.0E-8 T 18-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CH53_2988 17911b502cf9075e5617bade5a1545fa 86 Gene3D G3DSA:1.20.1280.290 3 86 2.6E-26 T 18-10-2018 CH53_2988 17911b502cf9075e5617bade5a1545fa 86 Pfam PF04193 PQ loop repeat 6 59 1.0E-10 T 18-10-2018 IPR006603 PQ-loop repeat CH53_1525 7a25c008eab54c9e1f2c5a66c1943f5b 507 Gene3D G3DSA:3.40.50.300 197 373 4.2E-20 T 18-10-2018 CH53_1525 7a25c008eab54c9e1f2c5a66c1943f5b 507 SMART SM00382 23 330 0.0089 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1525 7a25c008eab54c9e1f2c5a66c1943f5b 507 Gene3D G3DSA:3.40.50.300 7 143 5.1E-10 T 18-10-2018 CH53_1525 7a25c008eab54c9e1f2c5a66c1943f5b 507 Pfam PF05872 Bacterial protein of unknown function (DUF853) 10 507 1.6E-231 T 18-10-2018 IPR033186 Helicase HerA-like C-terminal CH53_1525 7a25c008eab54c9e1f2c5a66c1943f5b 507 SUPERFAMILY SSF52540 19 370 2.52E-51 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3224 b8e40bebc94e140eee05b951f1533c2e 376 Gene3D G3DSA:3.40.50.720 1 133 4.5E-39 T 18-10-2018 CH53_3224 b8e40bebc94e140eee05b951f1533c2e 376 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 265 3.2E-9 T 18-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 CH53_3224 b8e40bebc94e140eee05b951f1533c2e 376 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 130 3.1E-24 T 18-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CH53_3224 b8e40bebc94e140eee05b951f1533c2e 376 SUPERFAMILY SSF51735 3 158 1.41E-48 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3224 b8e40bebc94e140eee05b951f1533c2e 376 Gene3D G3DSA:3.30.360.10 136 374 2.2E-66 T 18-10-2018 CH53_3224 b8e40bebc94e140eee05b951f1533c2e 376 SUPERFAMILY SSF55347 135 310 7.19E-36 T 18-10-2018 CH53_3753 c4409bf5809d080a74538bcb7e629bf0 212 Gene3D G3DSA:3.40.1400.10 1 212 3.6E-97 T 18-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CH53_3753 c4409bf5809d080a74538bcb7e629bf0 212 Pfam PF12408 Ribose-5-phosphate isomerase 164 210 1.1E-22 T 18-10-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal CH53_3753 c4409bf5809d080a74538bcb7e629bf0 212 SUPERFAMILY SSF89623 1 161 9.55E-36 T 18-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CH53_3753 c4409bf5809d080a74538bcb7e629bf0 212 Pfam PF02502 Ribose/Galactose Isomerase 3 142 9.5E-30 T 18-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CH53_3143 8666e7790ee9c4d22620123ff4fd0360 406 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 176 404 8.2E-82 T 18-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 CH53_3143 8666e7790ee9c4d22620123ff4fd0360 406 SUPERFAMILY SSF47005 107 151 4.71E-11 T 18-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CH53_3143 8666e7790ee9c4d22620123ff4fd0360 406 Pfam PF02817 e3 binding domain 114 146 1.5E-11 T 18-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 CH53_3143 8666e7790ee9c4d22620123ff4fd0360 406 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 18-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CH53_3143 8666e7790ee9c4d22620123ff4fd0360 406 Pfam PF00364 Biotin-requiring enzyme 5 77 2.5E-19 T 18-10-2018 IPR000089 Biotin/lipoyl attachment CH53_3143 8666e7790ee9c4d22620123ff4fd0360 406 Gene3D G3DSA:3.30.559.10 174 406 1.3E-97 T 18-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CH53_3143 8666e7790ee9c4d22620123ff4fd0360 406 Gene3D G3DSA:2.40.50.100 2 79 1.1E-23 T 18-10-2018 CH53_3143 8666e7790ee9c4d22620123ff4fd0360 406 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 406 1.2E-190 T 18-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CH53_3143 8666e7790ee9c4d22620123ff4fd0360 406 Gene3D G3DSA:4.10.320.10 103 152 4.4E-22 T 18-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CH53_3143 8666e7790ee9c4d22620123ff4fd0360 406 SUPERFAMILY SSF52777 176 405 2.54E-89 T 18-10-2018 CH53_3143 8666e7790ee9c4d22620123ff4fd0360 406 SUPERFAMILY SSF51230 2 93 1.57E-24 T 18-10-2018 IPR011053 Single hybrid motif CH53_2871 3ac0dd87bd3ffe07238f04d97eede699 346 Gene3D G3DSA:3.40.50.1100 49 155 1.1E-68 T 18-10-2018 CH53_2871 3ac0dd87bd3ffe07238f04d97eede699 346 SUPERFAMILY SSF53686 10 331 8.91E-70 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH53_2871 3ac0dd87bd3ffe07238f04d97eede699 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 312 3.1E-44 T 18-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CH53_2871 3ac0dd87bd3ffe07238f04d97eede699 346 Gene3D G3DSA:3.40.50.1100 22 322 1.1E-68 T 18-10-2018 CH53_1978 5a87e846690d216950c299017d9c2c3b 245 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 244 3.6E-99 T 18-10-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 MetaCyc: PWY-7315 CH53_1978 5a87e846690d216950c299017d9c2c3b 245 SUPERFAMILY SSF55729 99 239 1.45E-26 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_1978 5a87e846690d216950c299017d9c2c3b 245 Pfam PF00583 Acetyltransferase (GNAT) family 149 230 1.1E-14 T 18-10-2018 IPR000182 GNAT domain CH53_1978 5a87e846690d216950c299017d9c2c3b 245 Gene3D G3DSA:3.40.630.30 1 244 8.3E-69 T 18-10-2018 CH53_1978 5a87e846690d216950c299017d9c2c3b 245 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 244 45.187 T 18-10-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 MetaCyc: PWY-7315 CH53_2489 d805b38129ae7f4a6f79b5bf331c1b16 422 Pfam PF01593 Flavin containing amine oxidoreductase 10 302 2.0E-21 T 18-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CH53_2489 d805b38129ae7f4a6f79b5bf331c1b16 422 Gene3D G3DSA:3.50.50.60 1 404 3.0E-25 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2489 d805b38129ae7f4a6f79b5bf331c1b16 422 SUPERFAMILY SSF51905 1 416 5.61E-54 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_4202 5d414acfd9e7549d3a4657a89d1f0983 379 Pfam PF06114 IrrE N-terminal-like domain 167 296 1.2E-12 T 18-10-2018 IPR010359 IrrE N-terminal-like domain CH53_104 dac5ffe79d876ef0995ee7a8bd373e7d 92 Gene3D G3DSA:3.30.70.100 1 91 9.8E-32 T 18-10-2018 CH53_104 dac5ffe79d876ef0995ee7a8bd373e7d 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 18-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CH53_104 dac5ffe79d876ef0995ee7a8bd373e7d 92 PRINTS PR00112 Acylphosphatase signature 5 20 8.9E-6 T 18-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CH53_104 dac5ffe79d876ef0995ee7a8bd373e7d 92 PRINTS PR00112 Acylphosphatase signature 61 81 8.9E-6 T 18-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CH53_104 dac5ffe79d876ef0995ee7a8bd373e7d 92 PRINTS PR00112 Acylphosphatase signature 26 51 8.9E-6 T 18-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CH53_104 dac5ffe79d876ef0995ee7a8bd373e7d 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 91 30.123 T 18-10-2018 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CH53_104 dac5ffe79d876ef0995ee7a8bd373e7d 92 Pfam PF00708 Acylphosphatase 8 90 2.9E-25 T 18-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CH53_104 dac5ffe79d876ef0995ee7a8bd373e7d 92 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 18-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CH53_104 dac5ffe79d876ef0995ee7a8bd373e7d 92 SUPERFAMILY SSF54975 3 92 8.94E-30 T 18-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CH53_2777 01e0a1e56caeb63053016f32a1903400 180 Pfam PF03079 ARD/ARD' family 5 165 5.4E-34 T 18-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 CH53_2777 01e0a1e56caeb63053016f32a1903400 180 SUPERFAMILY SSF51182 4 179 7.13E-43 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_2777 01e0a1e56caeb63053016f32a1903400 180 Gene3D G3DSA:2.60.120.10 2 157 1.5E-55 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_2777 01e0a1e56caeb63053016f32a1903400 180 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 38.344 T 18-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 CH53_1523 f0e60c485be3c9d0bab8ae568c8f7599 74 Pfam PF07362 Post-segregation antitoxin CcdA 4 74 1.2E-20 T 18-10-2018 IPR009956 Post-segregation antitoxin CcdA CH53_3279 e87887ac02d16e91ceb3c35a6a1a6b67 262 Gene3D G3DSA:3.40.50.12280 14 181 1.8E-50 T 18-10-2018 CH53_3279 e87887ac02d16e91ceb3c35a6a1a6b67 262 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 127 143 - T 18-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3279 e87887ac02d16e91ceb3c35a6a1a6b67 262 SUPERFAMILY SSF56770 32 163 1.96E-48 T 18-10-2018 CH53_3279 e87887ac02d16e91ceb3c35a6a1a6b67 262 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 44 152 1.3E-22 T 18-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_2645 fe2c608319d1e52c21e5238a32e6fe0b 138 Gene3D G3DSA:3.40.1490.10 4 137 6.5E-8 T 18-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 CH53_2645 fe2c608319d1e52c21e5238a32e6fe0b 138 Pfam PF09391 Protein of unknown function (DUF2000) 5 138 1.1E-30 T 18-10-2018 IPR018988 Protein of unknown function DUF2000 CH53_2645 fe2c608319d1e52c21e5238a32e6fe0b 138 SUPERFAMILY SSF102462 4 138 7.32E-27 T 18-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 CH53_1012 f8cae07f75834c0dc76d764b1e4ed3b8 306 SUPERFAMILY SSF54211 134 278 3.19E-54 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_1012 f8cae07f75834c0dc76d764b1e4ed3b8 306 Gene3D G3DSA:3.30.230.20 1 128 5.3E-52 T 18-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CH53_1012 f8cae07f75834c0dc76d764b1e4ed3b8 306 SUPERFAMILY SSF54211 3 124 1.06E-41 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_1012 f8cae07f75834c0dc76d764b1e4ed3b8 306 Gene3D G3DSA:3.30.1700.10 129 306 7.9E-76 T 18-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CH53_1012 f8cae07f75834c0dc76d764b1e4ed3b8 306 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 5.9E-159 T 18-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CH53_1012 f8cae07f75834c0dc76d764b1e4ed3b8 306 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.034 T 18-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CH53_1012 f8cae07f75834c0dc76d764b1e4ed3b8 306 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 2.2E-108 T 18-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CH53_630 7d0ef671f720f6b49c059bae9c1722eb 339 Pfam PF13413 Helix-turn-helix domain 18 79 2.8E-15 T 18-10-2018 CH53_630 7d0ef671f720f6b49c059bae9c1722eb 339 SMART SM00530 18 79 5.6E-7 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_630 7d0ef671f720f6b49c059bae9c1722eb 339 SUPERFAMILY SSF47413 12 82 2.63E-9 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_630 7d0ef671f720f6b49c059bae9c1722eb 339 Pfam PF13464 Domain of unknown function (DUF4115) 262 336 4.7E-24 T 18-10-2018 IPR025194 Domain of unknown function DUF4115 CH53_630 7d0ef671f720f6b49c059bae9c1722eb 339 Gene3D G3DSA:1.10.260.40 4 111 8.6E-21 T 18-10-2018 CH53_630 7d0ef671f720f6b49c059bae9c1722eb 339 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 339 43.276 T 18-10-2018 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 CH53_2896 8649634a093a4c0b6a63e5016116635e 126 PIRSF PIRSF016789 2 123 6.8E-47 T 18-10-2018 IPR007401 Protein of unknown function DUF454 CH53_2896 8649634a093a4c0b6a63e5016116635e 126 Pfam PF04304 Protein of unknown function (DUF454) 3 116 1.7E-39 T 18-10-2018 IPR007401 Protein of unknown function DUF454 CH53_1541 19185dae409835556165bafff2bbe0dd 335 Pfam PF05036 Sporulation related domain 251 324 2.9E-9 T 18-10-2018 IPR007730 Sporulation-like domain GO:0042834 CH53_1541 19185dae409835556165bafff2bbe0dd 335 Hamap MF_02021 Cell division protein DamX [damX]. 1 335 25.798 T 18-10-2018 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 CH53_1541 19185dae409835556165bafff2bbe0dd 335 Gene3D G3DSA:3.30.70.1070 231 334 9.9E-33 T 18-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CH53_1286 f126f46af31387cf7767a3ee4d4ee379 277 SUPERFAMILY SSF51717 6 274 5.36E-103 T 18-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_1286 f126f46af31387cf7767a3ee4d4ee379 277 Gene3D G3DSA:3.20.20.20 1 276 4.9E-110 T 18-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_1286 f126f46af31387cf7767a3ee4d4ee379 277 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 18-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_1286 f126f46af31387cf7767a3ee4d4ee379 277 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 271 3.4E-101 T 18-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CH53_1286 f126f46af31387cf7767a3ee4d4ee379 277 Pfam PF00809 Pterin binding enzyme 18 257 4.7E-87 T 18-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_1286 f126f46af31387cf7767a3ee4d4ee379 277 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 18-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CH53_3372 366e9d242ba80fba340d92a69328b294 470 Gene3D G3DSA:3.40.50.300 7 193 2.4E-30 T 18-10-2018 CH53_3372 366e9d242ba80fba340d92a69328b294 470 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 6 456 43.185 T 18-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 CH53_3372 366e9d242ba80fba340d92a69328b294 470 Gene3D G3DSA:3.40.50.880 271 422 1.3E-7 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_3372 366e9d242ba80fba340d92a69328b294 470 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 10 456 2.1E-132 T 18-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 CH53_3372 366e9d242ba80fba340d92a69328b294 470 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 10 195 2.6E-19 T 18-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CH53_3372 366e9d242ba80fba340d92a69328b294 470 SUPERFAMILY SSF52540 8 202 1.48E-47 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3372 366e9d242ba80fba340d92a69328b294 470 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 264 455 1.3E-39 T 18-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CH53_3372 366e9d242ba80fba340d92a69328b294 470 SUPERFAMILY SSF52317 265 463 3.44E-29 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_425 bac61a9d9523dd781c5e7b5d8f20a77f 433 Gene3D G3DSA:3.40.50.1240 47 285 3.5E-137 T 18-10-2018 IPR029033 Histidine phosphatase superfamily CH53_425 bac61a9d9523dd781c5e7b5d8f20a77f 433 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 34 48 - T 18-10-2018 IPR033379 Histidine acid phosphatase active site CH53_425 bac61a9d9523dd781c5e7b5d8f20a77f 433 SUPERFAMILY SSF53254 30 429 1.72E-69 T 18-10-2018 IPR029033 Histidine phosphatase superfamily CH53_425 bac61a9d9523dd781c5e7b5d8f20a77f 433 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 33 137 9.5E-8 T 18-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 CH53_425 bac61a9d9523dd781c5e7b5d8f20a77f 433 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 324 340 - T 18-10-2018 IPR033379 Histidine acid phosphatase active site CH53_425 bac61a9d9523dd781c5e7b5d8f20a77f 433 Gene3D G3DSA:3.40.50.1240 32 423 3.5E-137 T 18-10-2018 IPR029033 Histidine phosphatase superfamily CH53_3008 068515130453f2b89f74a3968af22345 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 3.0E-57 T 18-10-2018 IPR018636 Protein of unknown function DUF2058 CH53_3981 0f61c59fb1c7fffacbcb1c7075ddb707 142 SUPERFAMILY SSF52833 3 137 3.73E-38 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_3981 0f61c59fb1c7fffacbcb1c7075ddb707 142 Pfam PF03960 ArsC family 7 115 1.3E-18 T 18-10-2018 IPR006660 Arsenate reductase-like CH53_3981 0f61c59fb1c7fffacbcb1c7075ddb707 142 Gene3D G3DSA:3.40.30.10 1 141 6.5E-60 T 18-10-2018 CH53_3981 0f61c59fb1c7fffacbcb1c7075ddb707 142 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 4.8E-40 T 18-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CH53_686 36516b1fce6383179b6a7d8ca3b5c51a 218 SUPERFAMILY SSF89069 1 66 8.37E-20 T 18-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 CH53_686 36516b1fce6383179b6a7d8ca3b5c51a 218 Gene3D G3DSA:1.10.10.880 1 66 6.3E-27 T 18-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 CH53_686 36516b1fce6383179b6a7d8ca3b5c51a 218 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 188 5.7E-22 T 18-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal CH53_686 36516b1fce6383179b6a7d8ca3b5c51a 218 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 2.5E-35 T 18-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CH53_686 36516b1fce6383179b6a7d8ca3b5c51a 218 PIRSF PIRSF016938 1 206 3.2E-32 T 18-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 CH53_4071 6e0a6a21e392ac788d55d0464cf2cb0b 403 Gene3D G3DSA:1.20.1290.10 94 207 3.4E-8 T 18-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CH53_4071 6e0a6a21e392ac788d55d0464cf2cb0b 403 SUPERFAMILY SSF69118 71 207 2.24E-16 T 18-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CH53_4071 6e0a6a21e392ac788d55d0464cf2cb0b 403 SUPERFAMILY SSF69118 269 400 1.73E-18 T 18-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CH53_4071 6e0a6a21e392ac788d55d0464cf2cb0b 403 Gene3D G3DSA:1.20.1290.10 287 403 6.7E-18 T 18-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CH53_2538 bd83469ec221cd66822a18c980e7fddd 445 SUPERFAMILY SSF53448 89 255 2.53E-8 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_2538 bd83469ec221cd66822a18c980e7fddd 445 Pfam PF11397 Glycosyltransferase (GlcNAc) 6 318 1.0E-69 T 18-10-2018 IPR021067 Glycosyltransferase, GlcNAc CH53_3616 6bb20e4c99b20debdbdf48e4fc71a730 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 4.5E-52 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3616 6bb20e4c99b20debdbdf48e4fc71a730 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 4.5E-52 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3616 6bb20e4c99b20debdbdf48e4fc71a730 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 17 42 4.5E-52 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3616 6bb20e4c99b20debdbdf48e4fc71a730 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 4.5E-52 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3616 6bb20e4c99b20debdbdf48e4fc71a730 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 4.5E-52 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3616 6bb20e4c99b20debdbdf48e4fc71a730 523 SUPERFAMILY SSF58104 248 517 1.14E-64 T 18-10-2018 CH53_3616 6bb20e4c99b20debdbdf48e4fc71a730 523 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 484 1.1E-49 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_3616 6bb20e4c99b20debdbdf48e4fc71a730 523 Gene3D G3DSA:1.10.287.950 224 518 1.4E-77 T 18-10-2018 CH53_3616 6bb20e4c99b20debdbdf48e4fc71a730 523 SMART SM00283 269 516 7.1E-78 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_3616 6bb20e4c99b20debdbdf48e4fc71a730 523 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 186 8.1E-20 T 18-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CH53_1247 112a6f0aef683a23d27c512301f03b2b 292 Pfam PF00005 ABC transporter 22 191 2.8E-21 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1247 112a6f0aef683a23d27c512301f03b2b 292 Gene3D G3DSA:3.40.50.300 3 282 4.1E-68 T 18-10-2018 CH53_1247 112a6f0aef683a23d27c512301f03b2b 292 SUPERFAMILY SSF52540 10 245 1.74E-50 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1247 112a6f0aef683a23d27c512301f03b2b 292 SMART SM00382 29 241 2.4E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2424 0749ebf21c19800728a8287389a11184 350 SMART SM00267 182 350 5.6E-48 T 18-10-2018 IPR000160 GGDEF domain CH53_2424 0749ebf21c19800728a8287389a11184 350 Gene3D G3DSA:3.30.70.270 184 350 6.2E-47 T 18-10-2018 CH53_2424 0749ebf21c19800728a8287389a11184 350 SUPERFAMILY SSF55073 198 349 1.1E-41 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_2424 0749ebf21c19800728a8287389a11184 350 Pfam PF00990 Diguanylate cyclase, GGDEF domain 194 345 9.2E-40 T 18-10-2018 IPR000160 GGDEF domain CH53_2424 0749ebf21c19800728a8287389a11184 350 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 189 348 1.1E-41 T 18-10-2018 IPR000160 GGDEF domain CH53_30 fbff10b803a99fca23217da76e0153ee 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 4 305 1.1E-144 T 18-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 CH53_30 fbff10b803a99fca23217da76e0153ee 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 296 2.9E-103 T 18-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CH53_30 fbff10b803a99fca23217da76e0153ee 306 PIRSF PIRSF026649 1 305 1.7E-99 T 18-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CH53_30 fbff10b803a99fca23217da76e0153ee 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 3 305 52.771 T 18-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 CH53_4339 b4f548636d72169fb07644063d8d17f4 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 1.4E-5 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_4339 b4f548636d72169fb07644063d8d17f4 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 1.4E-5 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_4339 b4f548636d72169fb07644063d8d17f4 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 63 78 1.4E-5 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_4339 b4f548636d72169fb07644063d8d17f4 318 Gene3D G3DSA:3.40.50.1820 1 317 5.0E-114 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_4339 b4f548636d72169fb07644063d8d17f4 318 Pfam PF00561 alpha/beta hydrolase fold 41 297 4.7E-33 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_4339 b4f548636d72169fb07644063d8d17f4 318 PIRSF PIRSF006431 2 317 2.3E-140 T 18-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 CH53_4339 b4f548636d72169fb07644063d8d17f4 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 66 77 3.5E-13 T 18-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CH53_4339 b4f548636d72169fb07644063d8d17f4 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 109 123 3.5E-13 T 18-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CH53_4339 b4f548636d72169fb07644063d8d17f4 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 40 48 3.5E-13 T 18-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CH53_4339 b4f548636d72169fb07644063d8d17f4 318 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 12 314 6.4E-125 T 18-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 CH53_4339 b4f548636d72169fb07644063d8d17f4 318 SUPERFAMILY SSF53474 7 313 2.97E-61 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2268 451e28de59df15609b8500f489367c7f 472 SUPERFAMILY SSF51971 145 401 1.77E-68 T 18-10-2018 CH53_2268 451e28de59df15609b8500f489367c7f 472 SUPERFAMILY SSF46548 7 157 8.37E-42 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CH53_2268 451e28de59df15609b8500f489367c7f 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 9.3E-25 T 18-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CH53_2268 451e28de59df15609b8500f489367c7f 472 Gene3D G3DSA:1.10.1060.10 13 146 4.7E-35 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CH53_2268 451e28de59df15609b8500f489367c7f 472 Gene3D G3DSA:3.50.50.60 147 275 6.2E-32 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2268 451e28de59df15609b8500f489367c7f 472 Gene3D G3DSA:3.50.50.60 285 472 3.1E-21 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2268 451e28de59df15609b8500f489367c7f 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 5.4E-261 T 18-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CH53_2268 451e28de59df15609b8500f489367c7f 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 1.7E-37 T 18-10-2018 CH53_2268 451e28de59df15609b8500f489367c7f 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.7E-37 T 18-10-2018 CH53_2268 451e28de59df15609b8500f489367c7f 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.7E-37 T 18-10-2018 CH53_2268 451e28de59df15609b8500f489367c7f 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 1.7E-37 T 18-10-2018 CH53_2268 451e28de59df15609b8500f489367c7f 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.7E-37 T 18-10-2018 CH53_2268 451e28de59df15609b8500f489367c7f 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 3.2E-38 T 18-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CH53_2347 84b53453038af0536b087f6816d234fa 193 SUPERFAMILY SSF53474 3 188 8.82E-18 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2347 84b53453038af0536b087f6816d234fa 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 3.9E-69 T 18-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CH53_2347 84b53453038af0536b087f6816d234fa 193 Gene3D G3DSA:3.40.50.1820 1 193 1.2E-62 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2491 50fea5d786f3bcb2bdef3f8b8bda4157 409 Pfam PF02353 Mycolic acid cyclopropane synthetase 132 403 1.5E-84 T 18-10-2018 CH53_2491 50fea5d786f3bcb2bdef3f8b8bda4157 409 Gene3D G3DSA:3.40.50.150 140 409 7.7E-102 T 18-10-2018 CH53_2491 50fea5d786f3bcb2bdef3f8b8bda4157 409 SUPERFAMILY SSF53335 22 362 3.01E-84 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_2491 50fea5d786f3bcb2bdef3f8b8bda4157 409 PIRSF PIRSF003085 18 409 2.5E-125 T 18-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CH53_3903 fdba98d33d2c75e2fc16283873c2aad3 317 Pfam PF00849 RNA pseudouridylate synthase 69 199 1.9E-17 T 18-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_3903 fdba98d33d2c75e2fc16283873c2aad3 317 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 18-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CH53_3903 fdba98d33d2c75e2fc16283873c2aad3 317 Pfam PF01479 S4 domain 4 44 2.5E-11 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_3903 fdba98d33d2c75e2fc16283873c2aad3 317 SUPERFAMILY SSF55120 69 233 3.2E-45 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_3903 fdba98d33d2c75e2fc16283873c2aad3 317 SUPERFAMILY SSF55174 5 98 9.57E-13 T 18-10-2018 CH53_3903 fdba98d33d2c75e2fc16283873c2aad3 317 Gene3D G3DSA:3.30.2350.10 63 251 5.0E-54 T 18-10-2018 CH53_3903 fdba98d33d2c75e2fc16283873c2aad3 317 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 233 2.2E-63 T 18-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CH53_3903 fdba98d33d2c75e2fc16283873c2aad3 317 Gene3D G3DSA:3.10.290.10 1 61 2.7E-20 T 18-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CH53_3903 fdba98d33d2c75e2fc16283873c2aad3 317 SMART SM00363 3 74 6.5E-9 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_3312 52c27dd931e4343d86fd926c1b25b380 401 Gene3D G3DSA:3.90.550.10 140 335 4.7E-8 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_3312 52c27dd931e4343d86fd926c1b25b380 401 SUPERFAMILY SSF53448 141 326 1.13E-8 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_1497 244d56249ab42abd38ae7c3b56259123 119 Pfam PF02635 DsrE/DsrF-like family 3 119 9.0E-22 T 18-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein CH53_1497 244d56249ab42abd38ae7c3b56259123 119 Gene3D G3DSA:3.40.1260.10 1 119 5.4E-36 T 18-10-2018 IPR027396 DsrEFH-like CH53_1497 244d56249ab42abd38ae7c3b56259123 119 SUPERFAMILY SSF75169 1 119 4.58E-37 T 18-10-2018 IPR027396 DsrEFH-like CH53_1497 244d56249ab42abd38ae7c3b56259123 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 4 119 3.4E-46 T 18-10-2018 IPR017462 Sulphur relay, TusC/DsrF CH53_1497 244d56249ab42abd38ae7c3b56259123 119 Hamap MF_00389 Protein TusC [tusC]. 1 119 35.798 T 18-10-2018 IPR037450 Sulphur relay, TusC CH53_3880 b00fca2e39cb0d9005117bfe0f136e0b 107 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 5 107 2.0E-53 T 18-10-2018 IPR007376 dsDNA mimic, putative CH53_3880 b00fca2e39cb0d9005117bfe0f136e0b 107 SUPERFAMILY SSF102816 1 107 3.92E-52 T 18-10-2018 IPR036763 Putative dsDNA mimic superfamily CH53_3880 b00fca2e39cb0d9005117bfe0f136e0b 107 Pfam PF04269 Protein of unknown function, DUF440 6 107 3.0E-47 T 18-10-2018 IPR007376 dsDNA mimic, putative CH53_3880 b00fca2e39cb0d9005117bfe0f136e0b 107 PIRSF PIRSF004916 1 107 2.1E-56 T 18-10-2018 IPR007376 dsDNA mimic, putative CH53_3880 b00fca2e39cb0d9005117bfe0f136e0b 107 Hamap MF_00680 UPF0263 protein YciU [yciU]. 3 107 34.961 T 18-10-2018 IPR007376 dsDNA mimic, putative CH53_3880 b00fca2e39cb0d9005117bfe0f136e0b 107 Gene3D G3DSA:3.10.450.140 7 107 5.3E-43 T 18-10-2018 IPR036763 Putative dsDNA mimic superfamily CH53_1048 4533aa9e9b08b2dbbb8f52653e3125c8 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1048 4533aa9e9b08b2dbbb8f52653e3125c8 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 210 3.6E-104 T 18-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 CH53_1048 4533aa9e9b08b2dbbb8f52653e3125c8 234 SUPERFAMILY SSF52540 1 221 2.06E-63 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1048 4533aa9e9b08b2dbbb8f52653e3125c8 234 Pfam PF00005 ABC transporter 19 157 3.3E-34 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1048 4533aa9e9b08b2dbbb8f52653e3125c8 234 SMART SM00382 24 214 3.1E-19 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_1048 4533aa9e9b08b2dbbb8f52653e3125c8 234 Gene3D G3DSA:3.40.50.300 1 226 7.7E-63 T 18-10-2018 CH53_1963 6405de738510ad3c91311f2f7a606751 176 Gene3D G3DSA:2.60.40.1090 24 175 2.5E-24 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_1963 6405de738510ad3c91311f2f7a606751 176 Pfam PF16970 Type-1 fimbrial protein, A 52 175 1.2E-7 T 18-10-2018 IPR039458 Type-1 fimbrial protein, A CH53_1963 6405de738510ad3c91311f2f7a606751 176 SUPERFAMILY SSF49401 25 175 2.49E-21 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_2033 a43596efab9a7fe7807061c9f0083ae5 371 SUPERFAMILY SSF53822 25 368 3.06E-88 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_2033 a43596efab9a7fe7807061c9f0083ae5 371 Gene3D G3DSA:3.40.50.2300 28 347 2.2E-116 T 18-10-2018 CH53_2033 a43596efab9a7fe7807061c9f0083ae5 371 Gene3D G3DSA:3.40.50.2300 145 273 2.2E-116 T 18-10-2018 CH53_2033 a43596efab9a7fe7807061c9f0083ae5 371 Pfam PF13458 Periplasmic binding protein 27 361 2.6E-61 T 18-10-2018 IPR028081 Leucine-binding protein domain CH53_2033 a43596efab9a7fe7807061c9f0083ae5 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 68 86 4.9E-63 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CH53_2033 a43596efab9a7fe7807061c9f0083ae5 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 331 346 4.9E-63 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CH53_2033 a43596efab9a7fe7807061c9f0083ae5 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 278 291 4.9E-63 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CH53_2033 a43596efab9a7fe7807061c9f0083ae5 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 255 273 4.9E-63 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CH53_2033 a43596efab9a7fe7807061c9f0083ae5 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 4.9E-63 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CH53_2033 a43596efab9a7fe7807061c9f0083ae5 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 27 43 4.9E-63 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CH53_2033 a43596efab9a7fe7807061c9f0083ae5 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 89 99 4.9E-63 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CH53_940 c3cca68b279cdd2a2ec448afdb8851c2 351 Pfam PF04389 Peptidase family M28 117 328 5.0E-29 T 18-10-2018 IPR007484 Peptidase M28 CH53_940 c3cca68b279cdd2a2ec448afdb8851c2 351 Gene3D G3DSA:3.40.630.10 26 347 3.0E-41 T 18-10-2018 CH53_940 c3cca68b279cdd2a2ec448afdb8851c2 351 SUPERFAMILY SSF53187 34 286 1.26E-35 T 18-10-2018 CH53_500 994fed6a0f00b7069fdc3c3326411c33 415 Gene3D G3DSA:2.60.120.330 1 415 1.3E-167 T 18-10-2018 IPR027443 Isopenicillin N synthase-like CH53_500 994fed6a0f00b7069fdc3c3326411c33 415 SUPERFAMILY SSF51197 3 413 4.46E-154 T 18-10-2018 CH53_500 994fed6a0f00b7069fdc3c3326411c33 415 Pfam PF07350 Protein of unknown function (DUF1479) 8 413 4.8E-147 T 18-10-2018 IPR010856 Protein of unknown function DUF1479 CH53_3400 bb73383b1c65f61c695b50b119c63fb3 99 SUPERFAMILY SSF53850 18 90 1.72E-5 T 18-10-2018 CH53_3400 bb73383b1c65f61c695b50b119c63fb3 99 Gene3D G3DSA:3.40.190.10 67 88 1.7E-12 T 18-10-2018 CH53_3400 bb73383b1c65f61c695b50b119c63fb3 99 Gene3D G3DSA:3.40.190.10 21 66 1.7E-12 T 18-10-2018 CH53_3875 5822edc84c500c359f398ff26ca9bd7e 545 Gene3D G3DSA:3.90.76.10 73 196 3.8E-211 T 18-10-2018 CH53_3875 5822edc84c500c359f398ff26ca9bd7e 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 465 1.5E-87 T 18-10-2018 IPR000914 Solute-binding protein family 5 domain CH53_3875 5822edc84c500c359f398ff26ca9bd7e 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 89 110 - T 18-10-2018 IPR023765 Solute-binding protein family 5, conserved site CH53_3875 5822edc84c500c359f398ff26ca9bd7e 545 SUPERFAMILY SSF53850 37 527 2.05E-148 T 18-10-2018 CH53_3875 5822edc84c500c359f398ff26ca9bd7e 545 PIRSF PIRSF002741 3 544 9.6E-116 T 18-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CH53_3875 5822edc84c500c359f398ff26ca9bd7e 545 Gene3D G3DSA:3.10.105.10 299 514 3.8E-211 T 18-10-2018 CH53_3875 5822edc84c500c359f398ff26ca9bd7e 545 Gene3D G3DSA:3.40.190.10 43 526 3.8E-211 T 18-10-2018 CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 18-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.984 T 18-10-2018 IPR026593 Protein translocase subunit SecY CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 18-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Pfam PF00344 SecY translocase 76 417 1.3E-119 T 18-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 1.3E-98 T 18-10-2018 CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 1.3E-98 T 18-10-2018 CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 1.3E-98 T 18-10-2018 CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 1.3E-98 T 18-10-2018 CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 1.3E-98 T 18-10-2018 CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.3E-98 T 18-10-2018 CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.3E-98 T 18-10-2018 CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.3E-98 T 18-10-2018 CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 1.3E-98 T 18-10-2018 CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PIRSF PIRSF004557 11 441 1.6E-123 T 18-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Gene3D G3DSA:1.10.3370.10 13 429 1.9E-164 T 18-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 2.9E-141 T 18-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CH53_1468 c9ddd3ae7a6ecd2a11613e657fea94a3 443 SUPERFAMILY SSF103491 16 424 6.28E-134 T 18-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CH53_3503 6180c960b32fa3fceb88d0d6ec56c0db 505 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 153 159 - T 18-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CH53_3503 6180c960b32fa3fceb88d0d6ec56c0db 505 SUPERFAMILY SSF53335 19 288 7.21E-36 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_3503 6180c960b32fa3fceb88d0d6ec56c0db 505 Pfam PF07669 Eco57I restriction-modification methylase 149 246 1.4E-10 T 18-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 CH53_3503 6180c960b32fa3fceb88d0d6ec56c0db 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 181 205 3.0E-14 T 18-10-2018 CH53_3503 6180c960b32fa3fceb88d0d6ec56c0db 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 66 80 3.0E-14 T 18-10-2018 CH53_3503 6180c960b32fa3fceb88d0d6ec56c0db 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 41 57 3.0E-14 T 18-10-2018 CH53_3503 6180c960b32fa3fceb88d0d6ec56c0db 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 150 162 3.0E-14 T 18-10-2018 CH53_3503 6180c960b32fa3fceb88d0d6ec56c0db 505 Gene3D G3DSA:3.40.50.150 24 322 5.4E-33 T 18-10-2018 CH53_3840 b10d925a1b88f29cef10e8fcb6984573 397 Pfam PF07690 Major Facilitator Superfamily 10 351 3.0E-46 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_3840 b10d925a1b88f29cef10e8fcb6984573 397 PRINTS PR01035 Tetracycline resistance protein signature 302 322 1.9E-7 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CH53_3840 b10d925a1b88f29cef10e8fcb6984573 397 PRINTS PR01035 Tetracycline resistance protein signature 44 63 1.9E-7 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CH53_3840 b10d925a1b88f29cef10e8fcb6984573 397 PRINTS PR01035 Tetracycline resistance protein signature 129 151 1.9E-7 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CH53_3840 b10d925a1b88f29cef10e8fcb6984573 397 PRINTS PR01035 Tetracycline resistance protein signature 14 30 1.9E-7 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CH53_3840 b10d925a1b88f29cef10e8fcb6984573 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 74 - T 18-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CH53_3840 b10d925a1b88f29cef10e8fcb6984573 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 374 3.2E-74 T 18-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 CH53_3840 b10d925a1b88f29cef10e8fcb6984573 397 Gene3D G3DSA:1.20.1720.10 4 383 7.0E-92 T 18-10-2018 CH53_3840 b10d925a1b88f29cef10e8fcb6984573 397 SUPERFAMILY SSF103473 4 385 7.06E-59 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_2254 5c9a65f24466b4408f714ae13713d833 189 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 152 1.1E-53 T 18-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 CH53_2254 5c9a65f24466b4408f714ae13713d833 189 Pfam PF02470 MlaD protein 39 116 1.0E-19 T 18-10-2018 IPR003399 Mce/MlaD CH53_2152 0f85a803c30dc7202553b3774793d59b 69 Gene3D G3DSA:1.10.1470.10 1 69 4.1E-35 T 18-10-2018 IPR036629 YjbJ superfamily CH53_2152 0f85a803c30dc7202553b3774793d59b 69 SUPERFAMILY SSF69047 1 69 1.12E-27 T 18-10-2018 IPR036629 YjbJ superfamily CH53_2152 0f85a803c30dc7202553b3774793d59b 69 Pfam PF05532 CsbD-like 4 56 7.8E-23 T 18-10-2018 IPR008462 CsbD-like domain CH53_2152 0f85a803c30dc7202553b3774793d59b 69 PIRSF PIRSF039008 1 66 9.5E-33 T 18-10-2018 IPR026042 Stress response protein YjbJ CH53_1671 5b477b20df7f244ee77a170c70ef927c 342 SUPERFAMILY SSF52499 2 182 4.84E-34 T 18-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CH53_1671 5b477b20df7f244ee77a170c70ef927c 342 Pfam PF00857 Isochorismatase family 4 145 9.8E-22 T 18-10-2018 IPR000868 Isochorismatase-like GO:0003824 CH53_1671 5b477b20df7f244ee77a170c70ef927c 342 Gene3D G3DSA:3.40.50.850 1 186 1.7E-33 T 18-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CH53_1350 aedbe359605437aab686cef007914200 296 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 284 5.1E-93 T 18-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CH53_1350 aedbe359605437aab686cef007914200 296 Pfam PF02666 Phosphatidylserine decarboxylase 63 284 1.3E-58 T 18-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CH53_1350 aedbe359605437aab686cef007914200 296 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 48.757 T 18-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 Gene3D G3DSA:2.40.10.120 38 287 4.0E-83 T 18-10-2018 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 Pfam PF13365 Trypsin-like peptidase domain 118 254 6.8E-32 T 18-10-2018 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 SUPERFAMILY SSF50494 2 302 7.27E-64 T 18-10-2018 IPR009003 Peptidase S1, PA clan CH53_955 a62f95fd20047ad14b0c009bef478efa 480 Pfam PF13180 PDZ domain 295 384 3.3E-14 T 18-10-2018 IPR001478 PDZ domain GO:0005515 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 SUPERFAMILY SSF50156 275 384 1.14E-21 T 18-10-2018 IPR036034 PDZ superfamily GO:0005515 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 Gene3D G3DSA:2.30.42.10 291 390 5.5E-27 T 18-10-2018 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 SMART SM00228 293 375 7.3E-12 T 18-10-2018 IPR001478 PDZ domain GO:0005515 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 SMART SM00228 400 472 1.5E-10 T 18-10-2018 IPR001478 PDZ domain GO:0005515 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 399 469 9.9E-12 T 18-10-2018 IPR001478 PDZ domain GO:0005515 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 Gene3D G3DSA:2.30.42.10 391 480 1.6E-29 T 18-10-2018 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 SUPERFAMILY SSF50156 410 476 6.84E-15 T 18-10-2018 IPR036034 PDZ superfamily GO:0005515 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 PRINTS PR00834 HtrA/DegQ protease family signature 128 140 3.7E-60 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 PRINTS PR00834 HtrA/DegQ protease family signature 149 169 3.7E-60 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 PRINTS PR00834 HtrA/DegQ protease family signature 225 242 3.7E-60 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 PRINTS PR00834 HtrA/DegQ protease family signature 333 345 3.7E-60 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 PRINTS PR00834 HtrA/DegQ protease family signature 190 214 3.7E-60 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 PRINTS PR00834 HtrA/DegQ protease family signature 247 264 3.7E-60 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CH53_955 a62f95fd20047ad14b0c009bef478efa 480 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 478 1.4E-163 T 18-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CH53_806 0fd71a1d60d92f1ed4aa692e6daf708d 246 PIRSF PIRSF000386 1 245 2.6E-102 T 18-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CH53_806 0fd71a1d60d92f1ed4aa692e6daf708d 246 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 4.8E-70 T 18-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CH53_806 0fd71a1d60d92f1ed4aa692e6daf708d 246 SUPERFAMILY SSF75217 1 244 2.22E-102 T 18-10-2018 IPR029028 Alpha/beta knot methyltransferases CH53_806 0fd71a1d60d92f1ed4aa692e6daf708d 246 Gene3D G3DSA:1.10.1270.20 161 246 4.9E-36 T 18-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CH53_806 0fd71a1d60d92f1ed4aa692e6daf708d 246 Gene3D G3DSA:3.40.1280.10 1 160 1.4E-67 T 18-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH53_806 0fd71a1d60d92f1ed4aa692e6daf708d 246 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 233 2.1E-110 T 18-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CH53_806 0fd71a1d60d92f1ed4aa692e6daf708d 246 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 246 120.023 T 18-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CH53_1022 d13b01be577c8856c1ae6f551b6c5ea8 454 Gene3D G3DSA:3.90.190.20 314 454 4.0E-47 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CH53_1022 d13b01be577c8856c1ae6f551b6c5ea8 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 34.505 T 18-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_1022 d13b01be577c8856c1ae6f551b6c5ea8 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 394 2.8E-14 T 18-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CH53_1022 d13b01be577c8856c1ae6f551b6c5ea8 454 SUPERFAMILY SSF63418 1 98 2.22E-27 T 18-10-2018 IPR035911 MurE/MurF, N-terminal CH53_1022 d13b01be577c8856c1ae6f551b6c5ea8 454 Pfam PF08245 Mur ligase middle domain 107 295 1.7E-48 T 18-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CH53_1022 d13b01be577c8856c1ae6f551b6c5ea8 454 Pfam PF01225 Mur ligase family, catalytic domain 25 93 9.2E-13 T 18-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CH53_1022 d13b01be577c8856c1ae6f551b6c5ea8 454 SUPERFAMILY SSF53623 101 312 3.53E-60 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CH53_1022 d13b01be577c8856c1ae6f551b6c5ea8 454 Gene3D G3DSA:3.40.1190.10 82 313 5.3E-86 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CH53_1022 d13b01be577c8856c1ae6f551b6c5ea8 454 Gene3D G3DSA:3.40.1390.10 1 81 7.0E-26 T 18-10-2018 CH53_1022 d13b01be577c8856c1ae6f551b6c5ea8 454 SUPERFAMILY SSF53244 315 448 4.58E-38 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CH53_1022 d13b01be577c8856c1ae6f551b6c5ea8 454 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 448 3.6E-142 T 18-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CH53_1272 06fb87eda20c4028278e86a9fc3205d7 340 SUPERFAMILY SSF51679 8 328 2.09E-83 T 18-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CH53_1272 06fb87eda20c4028278e86a9fc3205d7 340 Gene3D G3DSA:3.20.20.30 3 332 4.6E-97 T 18-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CH53_1272 06fb87eda20c4028278e86a9fc3205d7 340 Pfam PF00296 Luciferase-like monooxygenase 23 244 1.8E-29 T 18-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CH53_1272 06fb87eda20c4028278e86a9fc3205d7 340 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 328 4.0E-138 T 18-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 CH53_3297 25439b129ab725bd4f0a16f9648f68a1 411 SUPERFAMILY SSF51004 10 312 1.07E-7 T 18-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CH53_1216 b6a98ce24c8fff1ea65d4e0bdccdce22 277 Gene3D G3DSA:3.30.160.390 1 88 8.6E-34 T 18-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CH53_1216 b6a98ce24c8fff1ea65d4e0bdccdce22 277 Pfam PF13356 Arm DNA-binding domain 3 87 1.2E-19 T 18-10-2018 IPR025166 Integrase, DNA-binding domain CH53_1216 b6a98ce24c8fff1ea65d4e0bdccdce22 277 SUPERFAMILY SSF56349 97 234 6.71E-17 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CH53_1216 b6a98ce24c8fff1ea65d4e0bdccdce22 277 Gene3D G3DSA:1.10.150.130 89 202 8.5E-30 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal CH53_3890 219dea20b9c5ef3c9d7b6d297ff8eb90 255 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 247 2.1E-93 T 18-10-2018 IPR009627 Uncharacterised protein family UPF0259 CH53_3890 219dea20b9c5ef3c9d7b6d297ff8eb90 255 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 249 22.524 T 18-10-2018 IPR009627 Uncharacterised protein family UPF0259 CH53_1902 1b54dbc7209740cd2c1d68ff33ee4685 293 Hamap MF_02039 Cell division protein FtsN [ftsN]. 33 293 35.291 T 18-10-2018 IPR011930 Cell division protein FtsN GO:0005515 CH53_1902 1b54dbc7209740cd2c1d68ff33ee4685 293 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 287 1.2E-78 T 18-10-2018 IPR011930 Cell division protein FtsN GO:0005515 CH53_1902 1b54dbc7209740cd2c1d68ff33ee4685 293 Pfam PF05036 Sporulation related domain 219 287 1.4E-17 T 18-10-2018 IPR007730 Sporulation-like domain GO:0042834 CH53_1902 1b54dbc7209740cd2c1d68ff33ee4685 293 Gene3D G3DSA:3.30.70.1070 213 293 3.2E-30 T 18-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CH53_1902 1b54dbc7209740cd2c1d68ff33ee4685 293 SUPERFAMILY SSF110997 219 288 2.09E-20 T 18-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CH53_3772 a13282a52228104afb0dc9454840d0d9 297 SUPERFAMILY SSF51695 24 296 8.89E-43 T 18-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CH53_3772 a13282a52228104afb0dc9454840d0d9 297 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 29 210 1.8E-16 T 18-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CH53_3772 a13282a52228104afb0dc9454840d0d9 297 Gene3D G3DSA:3.20.20.190 19 296 1.5E-31 T 18-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CH53_877 5d8d33bceec1d47812468f633c99eb12 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 78 6.2E-18 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_877 5d8d33bceec1d47812468f633c99eb12 313 Gene3D G3DSA:1.10.10.10 17 104 3.2E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_877 5d8d33bceec1d47812468f633c99eb12 313 Pfam PF03466 LysR substrate binding domain 101 309 7.4E-30 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_877 5d8d33bceec1d47812468f633c99eb12 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 66 9.7E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_877 5d8d33bceec1d47812468f633c99eb12 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 55 9.7E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_877 5d8d33bceec1d47812468f633c99eb12 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 9.7E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_877 5d8d33bceec1d47812468f633c99eb12 313 SUPERFAMILY SSF53850 101 311 3.08E-31 T 18-10-2018 CH53_877 5d8d33bceec1d47812468f633c99eb12 313 Gene3D G3DSA:3.40.190.10 114 306 1.3E-47 T 18-10-2018 CH53_877 5d8d33bceec1d47812468f633c99eb12 313 Gene3D G3DSA:3.40.190.10 174 280 1.3E-47 T 18-10-2018 CH53_877 5d8d33bceec1d47812468f633c99eb12 313 SUPERFAMILY SSF46785 19 125 1.19E-19 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_877 5d8d33bceec1d47812468f633c99eb12 313 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 10 308 1.4E-156 T 18-10-2018 IPR011781 D-serine deaminase transcriptional activator CH53_974 06e54e80a5e2271b6dc138f81ba9996d 159 Gene3D G3DSA:3.30.70.560 1 159 4.4E-60 T 18-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CH53_974 06e54e80a5e2271b6dc138f81ba9996d 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.3E-36 T 18-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CH53_974 06e54e80a5e2271b6dc138f81ba9996d 159 SUPERFAMILY SSF55083 1 156 1.1E-53 T 18-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CH53_974 06e54e80a5e2271b6dc138f81ba9996d 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 18-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CH53_974 06e54e80a5e2271b6dc138f81ba9996d 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 4.8E-45 T 18-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CH53_2662 ebf36bf6b003055129fa08db761f7018 329 Pfam PF03934 Type II secretion system (T2SS), protein K 43 316 8.3E-15 T 18-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 CH53_2662 ebf36bf6b003055129fa08db761f7018 329 SUPERFAMILY SSF158544 209 263 3.14E-15 T 18-10-2018 IPR038072 GspK, central domain superfamily CH53_2662 ebf36bf6b003055129fa08db761f7018 329 Gene3D G3DSA:1.10.40.60 210 277 3.4E-9 T 18-10-2018 IPR038072 GspK, central domain superfamily CH53_67 75c860c4345245091f31fa358ff28beb 484 TIGRFAM TIGR00800 ncs1: NCS1 nucleoside transporter family 19 459 4.3E-126 T 18-10-2018 IPR012681 Nucleobase cation symporter-1, NCS1 GO:0016020|GO:0022857|GO:0055085 CH53_67 75c860c4345245091f31fa358ff28beb 484 Gene3D G3DSA:1.10.4160.10 9 484 2.0E-105 T 18-10-2018 IPR038271 Purine-cytosine permease superfamily CH53_67 75c860c4345245091f31fa358ff28beb 484 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 23 461 1.3E-127 T 18-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 CH53_2752 e9d86be155ac2d401273b3cacfde38cd 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 151 3.0E-40 T 18-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CH53_2752 e9d86be155ac2d401273b3cacfde38cd 188 Gene3D G3DSA:3.40.50.1000 4 188 3.2E-66 T 18-10-2018 IPR023214 HAD superfamily CH53_2752 e9d86be155ac2d401273b3cacfde38cd 188 Pfam PF13242 HAD-hyrolase-like 109 179 6.9E-11 T 18-10-2018 CH53_2752 e9d86be155ac2d401273b3cacfde38cd 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 181 9.3E-94 T 18-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CH53_2752 e9d86be155ac2d401273b3cacfde38cd 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 155 3.5E-38 T 18-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CH53_2752 e9d86be155ac2d401273b3cacfde38cd 188 PIRSF PIRSF004682 1 188 5.0E-66 T 18-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CH53_2752 e9d86be155ac2d401273b3cacfde38cd 188 SUPERFAMILY SSF56784 3 184 4.07E-53 T 18-10-2018 IPR036412 HAD-like superfamily CH53_3843 9b8c5c3cf99e2241e74f034681379554 425 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 41.836 T 18-10-2018 IPR006698 Uncharacterised protein family UPF0229 CH53_3843 9b8c5c3cf99e2241e74f034681379554 425 Pfam PF04285 Protein of unknown function (DUF444) 4 421 4.0E-188 T 18-10-2018 IPR006698 Uncharacterised protein family UPF0229 CH53_1115 5d32ce291bb8f4569063e5f4000217e9 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 6.7E-126 T 18-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CH53_1115 5d32ce291bb8f4569063e5f4000217e9 239 Pfam PF01048 Phosphorylase superfamily 15 219 9.6E-42 T 18-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CH53_1115 5d32ce291bb8f4569063e5f4000217e9 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.633 T 18-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CH53_1115 5d32ce291bb8f4569063e5f4000217e9 239 SUPERFAMILY SSF53167 3 234 2.09E-94 T 18-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CH53_1115 5d32ce291bb8f4569063e5f4000217e9 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 18-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CH53_1115 5d32ce291bb8f4569063e5f4000217e9 239 Gene3D G3DSA:3.40.50.1580 1 239 1.1E-77 T 18-10-2018 CH53_2582 084e10cfede42a35b4ffce1fccbf337f 376 Pfam PF04055 Radical SAM superfamily 11 179 1.0E-17 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_2582 084e10cfede42a35b4ffce1fccbf337f 376 Pfam PF06969 HemN C-terminal domain 305 364 2.6E-9 T 18-10-2018 IPR010723 HemN, C-terminal CH53_2582 084e10cfede42a35b4ffce1fccbf337f 376 Gene3D G3DSA:3.80.30.20 2 290 3.1E-99 T 18-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CH53_2582 084e10cfede42a35b4ffce1fccbf337f 376 SMART SM00729 6 223 1.8E-50 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CH53_2582 084e10cfede42a35b4ffce1fccbf337f 376 SUPERFAMILY SSF102114 5 376 1.29E-109 T 18-10-2018 CH53_2582 084e10cfede42a35b4ffce1fccbf337f 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 2.4E-141 T 18-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 CH53_1999 3115566c8e1248b8d64c74a72ed46232 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 201 9.8E-14 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CH53_1999 3115566c8e1248b8d64c74a72ed46232 238 SUPERFAMILY SSF56784 10 238 7.73E-41 T 18-10-2018 IPR036412 HAD-like superfamily CH53_1999 3115566c8e1248b8d64c74a72ed46232 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 207 1.1E-12 T 18-10-2018 CH53_1999 3115566c8e1248b8d64c74a72ed46232 238 Gene3D G3DSA:1.20.120.1600 24 110 3.8E-62 T 18-10-2018 CH53_1999 3115566c8e1248b8d64c74a72ed46232 238 Gene3D G3DSA:3.40.50.1000 12 231 3.8E-62 T 18-10-2018 IPR023214 HAD superfamily CH53_2688 dc42368850504fe12af6ec886dac4e59 177 Pfam PF07963 Prokaryotic N-terminal methylation motif 19 41 1.4E-5 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site CH53_2688 dc42368850504fe12af6ec886dac4e59 177 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 42 3.6E-4 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site CH53_2688 dc42368850504fe12af6ec886dac4e59 177 SUPERFAMILY SSF54523 25 170 1.1E-12 T 18-10-2018 CH53_1767 54fbe8f71a6e0be03337d170eb3f99ab 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 1.5E-204 T 18-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 CH53_1767 54fbe8f71a6e0be03337d170eb3f99ab 456 SUPERFAMILY SSF51161 255 437 3.76E-51 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily CH53_1767 54fbe8f71a6e0be03337d170eb3f99ab 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 18-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CH53_1767 54fbe8f71a6e0be03337d170eb3f99ab 456 Pfam PF12804 MobA-like NTP transferase domain 8 123 2.6E-22 T 18-10-2018 IPR025877 MobA-like NTP transferase CH53_1767 54fbe8f71a6e0be03337d170eb3f99ab 456 Gene3D G3DSA:3.90.550.10 1 227 4.5E-75 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_1767 54fbe8f71a6e0be03337d170eb3f99ab 456 Gene3D G3DSA:2.160.10.10 228 456 4.0E-71 T 18-10-2018 CH53_1767 54fbe8f71a6e0be03337d170eb3f99ab 456 SUPERFAMILY SSF53448 5 252 1.56E-68 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_1767 54fbe8f71a6e0be03337d170eb3f99ab 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 3.8E-6 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_1767 54fbe8f71a6e0be03337d170eb3f99ab 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 3.0E-5 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_1767 54fbe8f71a6e0be03337d170eb3f99ab 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 322 352 7.9E-4 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_1767 54fbe8f71a6e0be03337d170eb3f99ab 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 43.251 T 18-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 CH53_1973 3ba39a221678db27705ababa322b10f1 339 Pfam PF02706 Chain length determinant protein 3 70 4.4E-13 T 18-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CH53_1973 3ba39a221678db27705ababa322b10f1 339 SUPERFAMILY SSF160355 42 307 1.44E-84 T 18-10-2018 CH53_1973 3ba39a221678db27705ababa322b10f1 339 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 1 336 55.973 T 18-10-2018 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 CH53_1257 e9fcc533265214ec2e69a2bddaca41ae 288 Pfam PF06007 Phosphonate metabolism protein PhnJ 7 278 9.1E-145 T 18-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CH53_1257 e9fcc533265214ec2e69a2bddaca41ae 288 PIRSF PIRSF011468 1 288 2.4E-163 T 18-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CH53_328 b31f203cdbbd5c639fc0c2ad2551d9a9 189 Gene3D G3DSA:3.40.50.880 1 185 6.1E-47 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_328 b31f203cdbbd5c639fc0c2ad2551d9a9 189 Pfam PF01965 DJ-1/PfpI family 2 164 2.5E-32 T 18-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CH53_328 b31f203cdbbd5c639fc0c2ad2551d9a9 189 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 3 177 1.6E-39 T 18-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 CH53_328 b31f203cdbbd5c639fc0c2ad2551d9a9 189 SUPERFAMILY SSF52317 2 186 3.17E-42 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like CH53_4014 22319b2ab27102cff538c398319d934f 443 Gene3D G3DSA:1.20.1250.20 16 231 1.3E-49 T 18-10-2018 CH53_4014 22319b2ab27102cff538c398319d934f 443 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 20 422 1.9E-98 T 18-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 CH53_4014 22319b2ab27102cff538c398319d934f 443 SUPERFAMILY SSF103473 21 432 7.59E-36 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_4014 22319b2ab27102cff538c398319d934f 443 Pfam PF07690 Major Facilitator Superfamily 44 275 1.3E-12 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_4014 22319b2ab27102cff538c398319d934f 443 Gene3D G3DSA:1.20.1250.20 239 428 7.0E-42 T 18-10-2018 CH53_2216 2fe3131002b6417ec53b2e2006eb4601 446 Pfam PF01523 Putative modulator of DNA gyrase 32 323 3.2E-59 T 18-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CH53_2216 2fe3131002b6417ec53b2e2006eb4601 446 Gene3D G3DSA:3.30.2290.10 7 232 1.1E-92 T 18-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal CH53_2216 2fe3131002b6417ec53b2e2006eb4601 446 SUPERFAMILY SSF111283 13 446 1.44E-128 T 18-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 CH53_4030 593226a7f847589738c10a3b393b9a1e 242 SMART SM00862 156 232 4.8E-19 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_4030 593226a7f847589738c10a3b393b9a1e 242 SUPERFAMILY SSF52172 1 188 5.9E-31 T 18-10-2018 IPR011006 CheY-like superfamily CH53_4030 593226a7f847589738c10a3b393b9a1e 242 Gene3D G3DSA:3.40.50.2300 1 119 7.8E-27 T 18-10-2018 CH53_4030 593226a7f847589738c10a3b393b9a1e 242 Gene3D G3DSA:1.10.10.10 121 239 1.0E-35 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4030 593226a7f847589738c10a3b393b9a1e 242 SMART SM00448 2 112 3.2E-29 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_4030 593226a7f847589738c10a3b393b9a1e 242 Pfam PF00072 Response regulator receiver domain 4 112 5.3E-19 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_4030 593226a7f847589738c10a3b393b9a1e 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.6E-19 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_1665 a32358b3e8116f5f1056f783cc198fa2 439 Gene3D G3DSA:3.20.20.150 2 439 1.3E-181 T 18-10-2018 CH53_1665 a32358b3e8116f5f1056f783cc198fa2 439 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 52.886 T 18-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CH53_1665 a32358b3e8116f5f1056f783cc198fa2 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 5.0E-215 T 18-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CH53_1665 a32358b3e8116f5f1056f783cc198fa2 439 SUPERFAMILY SSF51658 4 438 3.91E-173 T 18-10-2018 IPR036237 Xylose isomerase-like superfamily CH53_1665 a32358b3e8116f5f1056f783cc198fa2 439 PRINTS PR00688 Xylose isomerase signature 133 153 3.1E-84 T 18-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CH53_1665 a32358b3e8116f5f1056f783cc198fa2 439 PRINTS PR00688 Xylose isomerase signature 180 201 3.1E-84 T 18-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CH53_1665 a32358b3e8116f5f1056f783cc198fa2 439 PRINTS PR00688 Xylose isomerase signature 156 175 3.1E-84 T 18-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CH53_1665 a32358b3e8116f5f1056f783cc198fa2 439 PRINTS PR00688 Xylose isomerase signature 207 226 3.1E-84 T 18-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CH53_1665 a32358b3e8116f5f1056f783cc198fa2 439 PRINTS PR00688 Xylose isomerase signature 333 344 3.1E-84 T 18-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CH53_1665 a32358b3e8116f5f1056f783cc198fa2 439 PRINTS PR00688 Xylose isomerase signature 271 298 3.1E-84 T 18-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CH53_1665 a32358b3e8116f5f1056f783cc198fa2 439 PRINTS PR00688 Xylose isomerase signature 300 311 3.1E-84 T 18-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CH53_1665 a32358b3e8116f5f1056f783cc198fa2 439 PRINTS PR00688 Xylose isomerase signature 92 114 3.1E-84 T 18-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CH53_1665 a32358b3e8116f5f1056f783cc198fa2 439 PRINTS PR00688 Xylose isomerase signature 229 253 3.1E-84 T 18-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CH53_1581 a78625592604efc2dde04739f0db5eca 565 SUPERFAMILY SSF55781 236 357 2.28E-5 T 18-10-2018 CH53_1581 a78625592604efc2dde04739f0db5eca 565 Pfam PF07694 5TMR of 5TMR-LYT 30 198 8.4E-58 T 18-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CH53_1581 a78625592604efc2dde04739f0db5eca 565 SUPERFAMILY SSF55874 426 558 1.1E-13 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1581 a78625592604efc2dde04739f0db5eca 565 Gene3D G3DSA:3.30.565.10 425 559 2.0E-11 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1581 a78625592604efc2dde04739f0db5eca 565 Pfam PF06580 Histidine kinase 373 450 2.7E-25 T 18-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CH53_2603 b751494a7a611b7c4d8d562cb55672f8 250 Gene3D G3DSA:3.30.2010.10 59 147 1.6E-8 T 18-10-2018 CH53_2603 b751494a7a611b7c4d8d562cb55672f8 250 Pfam PF01435 Peptidase family M48 72 245 1.6E-25 T 18-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CH53_3941 2eed082a26a3b686c123a7c7f4c0005e 706 Gene3D G3DSA:3.40.50.300 462 706 4.6E-87 T 18-10-2018 CH53_3941 2eed082a26a3b686c123a7c7f4c0005e 706 SUPERFAMILY SSF52540 464 704 6.82E-86 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3941 2eed082a26a3b686c123a7c7f4c0005e 706 SMART SM00382 494 682 7.3E-19 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3941 2eed082a26a3b686c123a7c7f4c0005e 706 Gene3D G3DSA:3.90.70.10 11 127 2.8E-16 T 18-10-2018 CH53_3941 2eed082a26a3b686c123a7c7f4c0005e 706 ProSitePatterns PS00211 ABC transporters family signature. 606 620 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3941 2eed082a26a3b686c123a7c7f4c0005e 706 Pfam PF00664 ABC transporter transmembrane region 156 422 2.5E-45 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CH53_3941 2eed082a26a3b686c123a7c7f4c0005e 706 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 12 706 0.0 T 18-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 CH53_3941 2eed082a26a3b686c123a7c7f4c0005e 706 SUPERFAMILY SSF90123 141 453 9.81E-64 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_3941 2eed082a26a3b686c123a7c7f4c0005e 706 Pfam PF00005 ABC transporter 485 634 5.8E-34 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3941 2eed082a26a3b686c123a7c7f4c0005e 706 Gene3D G3DSA:1.20.1560.10 140 453 2.0E-71 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CH53_3941 2eed082a26a3b686c123a7c7f4c0005e 706 Pfam PF03412 Peptidase C39 family 15 127 5.8E-5 T 18-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CH53_865 e4541ffa888afc5acff73f0fcb641765 577 Gene3D G3DSA:3.60.110.10 8 266 6.1E-82 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CH53_865 e4541ffa888afc5acff73f0fcb641765 577 Gene3D G3DSA:3.60.110.10 294 564 1.5E-48 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CH53_865 e4541ffa888afc5acff73f0fcb641765 577 SUPERFAMILY SSF56317 290 526 6.28E-46 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CH53_865 e4541ffa888afc5acff73f0fcb641765 577 SUPERFAMILY SSF56317 5 267 1.14E-75 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CH53_865 e4541ffa888afc5acff73f0fcb641765 577 Pfam PF00795 Carbon-nitrogen hydrolase 7 247 1.1E-51 T 18-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CH53_865 e4541ffa888afc5acff73f0fcb641765 577 Pfam PF00795 Carbon-nitrogen hydrolase 295 521 7.6E-29 T 18-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CH53_3570 d1bcaa42fbaa89bd736df48ea30deba7 148 Pfam PF02050 Flagellar FliJ protein 19 141 1.9E-34 T 18-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CH53_3570 d1bcaa42fbaa89bd736df48ea30deba7 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 143 1.8E-34 T 18-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CH53_3570 d1bcaa42fbaa89bd736df48ea30deba7 148 PIRSF PIRSF019404 1 148 3.3E-50 T 18-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CH53_3570 d1bcaa42fbaa89bd736df48ea30deba7 148 PRINTS PR01004 Flagellar FliJ protein signature 4 26 3.4E-41 T 18-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CH53_3570 d1bcaa42fbaa89bd736df48ea30deba7 148 PRINTS PR01004 Flagellar FliJ protein signature 126 146 3.4E-41 T 18-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CH53_3570 d1bcaa42fbaa89bd736df48ea30deba7 148 PRINTS PR01004 Flagellar FliJ protein signature 27 43 3.4E-41 T 18-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CH53_3570 d1bcaa42fbaa89bd736df48ea30deba7 148 PRINTS PR01004 Flagellar FliJ protein signature 108 126 3.4E-41 T 18-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CH53_3570 d1bcaa42fbaa89bd736df48ea30deba7 148 PRINTS PR01004 Flagellar FliJ protein signature 44 61 3.4E-41 T 18-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CH53_3570 d1bcaa42fbaa89bd736df48ea30deba7 148 PRINTS PR01004 Flagellar FliJ protein signature 63 84 3.4E-41 T 18-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CH53_3570 d1bcaa42fbaa89bd736df48ea30deba7 148 PRINTS PR01004 Flagellar FliJ protein signature 86 107 3.4E-41 T 18-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CH53_3038 08ba91b7e2da79b044a21a25afa38c2e 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 318 3.1E-49 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_1387 dfc716bfda5353587dfc30718df4ea5b 455 Pfam PF02378 Phosphotransferase system, EIIC 100 382 9.5E-33 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_1387 dfc716bfda5353587dfc30718df4ea5b 455 Gene3D G3DSA:3.30.1360.60 1 51 8.4E-13 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_1387 dfc716bfda5353587dfc30718df4ea5b 455 SUPERFAMILY SSF55604 1 52 4.18E-11 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_868 543887594ac058f2cda629a36acb416f 163 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 1.5E-53 T 18-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CH53_868 543887594ac058f2cda629a36acb416f 163 Gene3D G3DSA:3.40.35.10 1 162 3.8E-57 T 18-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CH53_868 543887594ac058f2cda629a36acb416f 163 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 152 6.3E-62 T 18-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CH53_868 543887594ac058f2cda629a36acb416f 163 SUPERFAMILY SSF52728 1 159 1.7E-54 T 18-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CH53_3396 66328c9e8312972d8df02970f701b2d7 418 Gene3D G3DSA:1.20.1250.20 6 190 3.9E-14 T 18-10-2018 CH53_3396 66328c9e8312972d8df02970f701b2d7 418 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 3.7E-186 T 18-10-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 CH53_3396 66328c9e8312972d8df02970f701b2d7 418 SUPERFAMILY SSF103473 9 406 7.59E-36 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_3396 66328c9e8312972d8df02970f701b2d7 418 Gene3D G3DSA:1.20.1250.20 199 417 1.0E-30 T 18-10-2018 CH53_3396 66328c9e8312972d8df02970f701b2d7 418 Pfam PF03825 Nucleoside H+ symporter 1 407 6.6E-159 T 18-10-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 CH53_1461 50ae122dfb35b431da511fe3f61712eb 126 Pfam PF09350 Domain of unknown function (DUF1992) 7 73 8.3E-22 T 18-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain CH53_2414 b11f81f723e210d20c104fdde232110a 367 Gene3D G3DSA:3.40.50.11750 28 263 5.3E-109 T 18-10-2018 CH53_2414 b11f81f723e210d20c104fdde232110a 367 Pfam PF01924 Hydrogenase formation hypA family 20 367 7.3E-150 T 18-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CH53_2414 b11f81f723e210d20c104fdde232110a 367 PIRSF PIRSF005622 1 367 5.3E-154 T 18-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CH53_2414 b11f81f723e210d20c104fdde232110a 367 Gene3D G3DSA:1.10.10.2140 319 367 2.8E-22 T 18-10-2018 CH53_2414 b11f81f723e210d20c104fdde232110a 367 Gene3D G3DSA:3.40.50.11740 66 304 5.3E-109 T 18-10-2018 CH53_2414 b11f81f723e210d20c104fdde232110a 367 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 367 1.8E-155 T 18-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CH53_2465 3f9fabff83dffbd1152caae9cd3bb83b 162 Pfam PF01526 Tn3 transposase DDE domain 1 134 1.8E-51 T 18-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CH53_2220 f1cb3584d9bec572dd77789fc0e0542f 121 TIGRFAM TIGR03577 EF_0830: conserved hypothetical protein EF_0830/AHA_3911 4 118 4.5E-68 T 18-10-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 CH53_2220 f1cb3584d9bec572dd77789fc0e0542f 121 Pfam PF14272 Glycine-rich SFCGS 4 117 3.0E-62 T 18-10-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 CH53_1355 f39934220ed173230ecf6bde9af0fb95 130 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 28.11 T 18-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CH53_1355 f39934220ed173230ecf6bde9af0fb95 130 SUPERFAMILY SSF81343 2 129 6.7E-56 T 18-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_1355 f39934220ed173230ecf6bde9af0fb95 130 Gene3D G3DSA:1.20.1300.10 2 130 7.6E-50 T 18-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_1355 f39934220ed173230ecf6bde9af0fb95 130 Pfam PF02300 Fumarate reductase subunit C 3 128 1.7E-53 T 18-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CH53_1355 f39934220ed173230ecf6bde9af0fb95 130 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 111 8.0E-51 T 18-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CH53_1355 f39934220ed173230ecf6bde9af0fb95 130 PIRSF PIRSF000180 2 130 2.2E-55 T 18-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CH53_3636 54c794adb1128d1d6a414596152e06f3 205 Pfam PF05063 MT-A70 3 173 1.1E-26 T 18-10-2018 IPR007757 MT-A70-like CH53_3636 54c794adb1128d1d6a414596152e06f3 205 SUPERFAMILY SSF53335 3 144 1.22E-6 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_3131 cf38309a7f3c9cb201e522aa938c2660 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 2.0E-90 T 18-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 CH53_3131 cf38309a7f3c9cb201e522aa938c2660 218 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 202 9.4E-67 T 18-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CH53_3131 cf38309a7f3c9cb201e522aa938c2660 218 SMART SM00796 4 202 2.6E-92 T 18-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CH53_3131 cf38309a7f3c9cb201e522aa938c2660 218 SUPERFAMILY SSF160467 5 92 8.11E-9 T 18-10-2018 CH53_3131 cf38309a7f3c9cb201e522aa938c2660 218 Gene3D G3DSA:2.40.100.10 87 217 3.5E-53 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily CH53_3131 cf38309a7f3c9cb201e522aa938c2660 218 SUPERFAMILY SSF50891 88 214 3.6E-43 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily CH53_1638 3e024148ca403383f565ae59c70dd6af 518 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 155 471 6.4E-110 T 18-10-2018 IPR017745 BcsE, GIL domain GO:0035438 CH53_1638 3e024148ca403383f565ae59c70dd6af 518 Pfam PF10995 GGDEF I-site like or GIL domain 160 471 8.5E-130 T 18-10-2018 IPR017745 BcsE, GIL domain GO:0035438 CH53_3418 909c02b8a892d6d6476a9112a299e560 545 SUPERFAMILY SSF53474 197 502 7.82E-11 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_3418 909c02b8a892d6d6476a9112a299e560 545 Pfam PF07819 PGAP1-like protein 211 279 3.1E-8 T 18-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 CH53_3418 909c02b8a892d6d6476a9112a299e560 545 Gene3D G3DSA:3.40.50.1820 183 312 9.7E-12 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2522 28807ff66baa37eb640aae0d61b4b484 109 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 18 80 1.1E-13 T 18-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_2522 28807ff66baa37eb640aae0d61b4b484 109 SUPERFAMILY SSF142019 9 80 1.1E-14 T 18-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_380 47d3dbf7c7222510fe06f58e12c78302 598 Gene3D G3DSA:3.30.460.80 4 156 4.3E-36 T 18-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_380 47d3dbf7c7222510fe06f58e12c78302 598 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 24 184 24.923 T 18-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_380 47d3dbf7c7222510fe06f58e12c78302 598 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 48 175 1.2E-45 T 18-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_380 47d3dbf7c7222510fe06f58e12c78302 598 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 214 598 1.8E-175 T 18-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_380 47d3dbf7c7222510fe06f58e12c78302 598 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 251 262 - T 18-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_380 47d3dbf7c7222510fe06f58e12c78302 598 Gene3D G3DSA:1.10.645.20 213 598 2.1E-143 T 18-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_380 47d3dbf7c7222510fe06f58e12c78302 598 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 210 598 41.953 T 18-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_380 47d3dbf7c7222510fe06f58e12c78302 598 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 104 159 1.0E-26 T 18-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_380 47d3dbf7c7222510fe06f58e12c78302 598 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 49 176 1.6E-42 T 18-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_380 47d3dbf7c7222510fe06f58e12c78302 598 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 328 598 3.8E-104 T 18-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_380 47d3dbf7c7222510fe06f58e12c78302 598 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 15 598 72.307 T 18-10-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 CH53_380 47d3dbf7c7222510fe06f58e12c78302 598 SUPERFAMILY SSF143243 24 228 1.96E-60 T 18-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_380 47d3dbf7c7222510fe06f58e12c78302 598 SUPERFAMILY SSF56762 224 598 1.7E-121 T 18-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_361 2861e4104c73e38b9efb9b6a8b5526a2 168 SUPERFAMILY SSF143744 14 152 6.8E-24 T 18-10-2018 IPR038084 GlcG-like domain superfamily CH53_361 2861e4104c73e38b9efb9b6a8b5526a2 168 Pfam PF03928 Haem-degrading 22 147 1.6E-26 T 18-10-2018 IPR005624 Haem-degrading CH53_361 2861e4104c73e38b9efb9b6a8b5526a2 168 Gene3D G3DSA:3.30.450.150 1 156 5.8E-44 T 18-10-2018 IPR038084 GlcG-like domain superfamily CH53_361 2861e4104c73e38b9efb9b6a8b5526a2 168 Hamap MF_00761 UPF0303 protein . 2 155 34.107 T 18-10-2018 IPR010371 Uncharacterised protein family UPF0303 CH53_361 2861e4104c73e38b9efb9b6a8b5526a2 168 PIRSF PIRSF008757 1 163 2.2E-58 T 18-10-2018 IPR010371 Uncharacterised protein family UPF0303 CH53_1010 b15d34daefac1d08a5e9b992df9bf79e 179 PIRSF PIRSF004572 1 177 7.2E-84 T 18-10-2018 IPR009502 Secretion monitor GO:0045182 CH53_1010 b15d34daefac1d08a5e9b992df9bf79e 179 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 176 7.0E-72 T 18-10-2018 IPR009502 Secretion monitor GO:0045182 CH53_1010 b15d34daefac1d08a5e9b992df9bf79e 179 Hamap MF_01332 Secretion monitor [secM]. 1 177 43.169 T 18-10-2018 IPR009502 Secretion monitor GO:0045182 CH53_1010 b15d34daefac1d08a5e9b992df9bf79e 179 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 174 6.6E-59 T 18-10-2018 IPR009502 Secretion monitor GO:0045182 CH53_774 efcc86c699e8db4ddfe40c81faeb0b09 394 SUPERFAMILY SSF53901 209 392 6.06E-45 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_774 efcc86c699e8db4ddfe40c81faeb0b09 394 SUPERFAMILY SSF53901 4 235 6.86E-35 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_774 efcc86c699e8db4ddfe40c81faeb0b09 394 Gene3D G3DSA:3.40.47.10 244 390 3.3E-40 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_774 efcc86c699e8db4ddfe40c81faeb0b09 394 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 241 341 4.6E-27 T 18-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CH53_774 efcc86c699e8db4ddfe40c81faeb0b09 394 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 93 235 2.8E-20 T 18-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CH53_774 efcc86c699e8db4ddfe40c81faeb0b09 394 SMART SM00825 Beta-ketoacyl synthase 68 394 1.2E-8 T 18-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH53_774 efcc86c699e8db4ddfe40c81faeb0b09 394 Gene3D G3DSA:3.40.47.10 5 240 3.5E-30 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_774 efcc86c699e8db4ddfe40c81faeb0b09 394 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 18-10-2018 IPR018201 Beta-ketoacyl synthase, active site CH53_1754 f5d88b586f19f72b92fe796ad04a8d8d 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 8.4E-30 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_1754 f5d88b586f19f72b92fe796ad04a8d8d 295 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 293 1.1E-84 T 18-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CH53_1754 f5d88b586f19f72b92fe796ad04a8d8d 295 SUPERFAMILY SSF161098 31 285 6.64E-34 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1754 f5d88b586f19f72b92fe796ad04a8d8d 295 Gene3D G3DSA:1.10.3720.10 14 287 1.4E-28 T 18-10-2018 IPR035906 MetI-like superfamily CH53_9 9e521acc6365c1c33ebb19ad18b3ba58 344 SUPERFAMILY SSF53659 5 340 7.4E-103 T 18-10-2018 CH53_9 9e521acc6365c1c33ebb19ad18b3ba58 344 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 342 3.2E-135 T 18-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CH53_9 9e521acc6365c1c33ebb19ad18b3ba58 344 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 344 143.676 T 18-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CH53_9 9e521acc6365c1c33ebb19ad18b3ba58 344 Pfam PF02504 Fatty acid synthesis protein 5 331 5.3E-119 T 18-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 CH53_9 9e521acc6365c1c33ebb19ad18b3ba58 344 Gene3D G3DSA:3.40.718.10 3 343 6.7E-124 T 18-10-2018 CH53_9 9e521acc6365c1c33ebb19ad18b3ba58 344 PIRSF PIRSF002465 2 344 7.6E-126 T 18-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CH53_3025 454b1ae2361ff4dbe15e3ce4d5957fca 100 SUPERFAMILY SSF56954 3 93 2.22E-14 T 18-10-2018 CH53_3025 454b1ae2361ff4dbe15e3ce4d5957fca 100 Gene3D G3DSA:1.20.1600.10 19 96 7.8E-21 T 18-10-2018 CH53_2313 e5a12e921442066ba0cd69bb04f57d59 238 Pfam PF08279 HTH domain 6 59 4.4E-18 T 18-10-2018 IPR013196 Helix-turn-helix, type 11 CH53_2313 e5a12e921442066ba0cd69bb04f57d59 238 SUPERFAMILY SSF46785 1 62 3.13E-11 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2313 e5a12e921442066ba0cd69bb04f57d59 238 Gene3D G3DSA:1.10.10.10 1 64 3.9E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2313 e5a12e921442066ba0cd69bb04f57d59 238 Pfam PF13280 WYL domain 138 228 3.3E-14 T 18-10-2018 IPR026881 WYL domain CH53_3504 72a3bf7cae0c5bb2cdaaf4931762b20d 423 SUPERFAMILY SSF56349 101 396 1.65E-49 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CH53_3504 72a3bf7cae0c5bb2cdaaf4931762b20d 423 Gene3D G3DSA:1.10.443.10 208 399 3.1E-15 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CH53_3504 72a3bf7cae0c5bb2cdaaf4931762b20d 423 Pfam PF13356 Arm DNA-binding domain 3 88 7.5E-22 T 18-10-2018 IPR025166 Integrase, DNA-binding domain CH53_3504 72a3bf7cae0c5bb2cdaaf4931762b20d 423 Gene3D G3DSA:1.10.150.130 102 207 3.0E-23 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal CH53_3504 72a3bf7cae0c5bb2cdaaf4931762b20d 423 Gene3D G3DSA:3.30.160.390 1 101 1.6E-40 T 18-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CH53_3504 72a3bf7cae0c5bb2cdaaf4931762b20d 423 Pfam PF00589 Phage integrase family 208 391 2.6E-17 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CH53_2422 bc1a409bf38e00bfe411b881ba59d817 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 316 333 - T 18-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CH53_2422 bc1a409bf38e00bfe411b881ba59d817 500 Gene3D G3DSA:1.20.1250.20 25 459 2.9E-72 T 18-10-2018 CH53_2422 bc1a409bf38e00bfe411b881ba59d817 500 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 34 433 7.5E-143 T 18-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 CH53_2422 bc1a409bf38e00bfe411b881ba59d817 500 Pfam PF00083 Sugar (and other) transporter 29 449 9.3E-64 T 18-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CH53_2422 bc1a409bf38e00bfe411b881ba59d817 500 Pfam PF08946 Osmosensory transporter coiled coil 455 500 9.5E-20 T 18-10-2018 IPR015041 Osmosensory transporter coiled coil CH53_2422 bc1a409bf38e00bfe411b881ba59d817 500 SUPERFAMILY SSF103473 25 442 1.7E-70 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_2422 bc1a409bf38e00bfe411b881ba59d817 500 SUPERFAMILY SSF103661 466 498 1.44E-9 T 18-10-2018 IPR036292 Proline/betaine transporter ProP, C-terminal CH53_2003 a07a579b797a630359914575d995e2c4 276 PIRSF PIRSF034452 1 276 2.7E-164 T 18-10-2018 IPR009215 TIM-barrel domain, IGPS-like CH53_2003 a07a579b797a630359914575d995e2c4 276 SUPERFAMILY SSF51621 3 197 5.34E-85 T 18-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CH53_2003 a07a579b797a630359914575d995e2c4 276 Gene3D G3DSA:3.20.20.70 1 252 3.6E-121 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2003 a07a579b797a630359914575d995e2c4 276 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 9 274 3.1E-133 T 18-10-2018 IPR009215 TIM-barrel domain, IGPS-like CH53_487 f4e541f55eebfa6de4771a2afc3994c0 473 Gene3D G3DSA:2.40.160.180 55 473 5.5E-110 T 18-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily CH53_487 f4e541f55eebfa6de4771a2afc3994c0 473 Pfam PF04966 Carbohydrate-selective porin, OprB family 101 473 7.4E-64 T 18-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 CH53_2928 01e1d8eaae9759774c92474d0a019e2b 228 Pfam PF00005 ABC transporter 27 174 6.7E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2928 01e1d8eaae9759774c92474d0a019e2b 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2928 01e1d8eaae9759774c92474d0a019e2b 228 SMART SM00382 35 223 3.9E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2928 01e1d8eaae9759774c92474d0a019e2b 228 SUPERFAMILY SSF52540 6 226 6.95E-63 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2928 01e1d8eaae9759774c92474d0a019e2b 228 Gene3D G3DSA:3.40.50.300 4 228 1.3E-63 T 18-10-2018 CH53_1685 37275cfc066c1751e5088dd1eee8e96c 224 Pfam PF03473 MOSC domain 46 159 2.5E-20 T 18-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CH53_1685 37275cfc066c1751e5088dd1eee8e96c 224 Pfam PF03475 3-alpha domain 168 211 2.0E-15 T 18-10-2018 IPR005163 3-alpha domain CH53_1685 37275cfc066c1751e5088dd1eee8e96c 224 SUPERFAMILY SSF50800 3 223 6.28E-74 T 18-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily CH53_1685 37275cfc066c1751e5088dd1eee8e96c 224 Gene3D G3DSA:2.40.33.20 1 224 1.3E-77 T 18-10-2018 CH53_3374 2a061d679c3de9989ec84cae382b9ca4 210 SUPERFAMILY SSF63965 9 207 1.31E-65 T 18-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 CH53_3374 2a061d679c3de9989ec84cae382b9ca4 210 Pfam PF02570 Precorrin-8X methylmutase 9 204 6.6E-68 T 18-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 CH53_3374 2a061d679c3de9989ec84cae382b9ca4 210 Gene3D G3DSA:3.40.50.10230 1 209 1.2E-72 T 18-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 CH53_2524 a7bba36dccfc483c6f9afb9083d76a82 316 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 241 254 - T 18-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CH53_2524 a7bba36dccfc483c6f9afb9083d76a82 316 Pfam PF00294 pfkB family carbohydrate kinase 3 294 2.5E-59 T 18-10-2018 IPR011611 Carbohydrate kinase PfkB CH53_2524 a7bba36dccfc483c6f9afb9083d76a82 316 SUPERFAMILY SSF53613 1 302 1.71E-72 T 18-10-2018 IPR029056 Ribokinase-like CH53_2524 a7bba36dccfc483c6f9afb9083d76a82 316 Gene3D G3DSA:3.40.1190.20 1 310 4.2E-83 T 18-10-2018 IPR029056 Ribokinase-like CH53_1509 f3d614e8e3922701e336ef7ecc434787 325 Gene3D G3DSA:3.40.50.2000 1 165 5.8E-20 T 18-10-2018 CH53_1509 f3d614e8e3922701e336ef7ecc434787 325 SUPERFAMILY SSF53756 2 322 7.77E-53 T 18-10-2018 CH53_1509 f3d614e8e3922701e336ef7ecc434787 325 Gene3D G3DSA:3.40.50.2000 169 325 2.0E-19 T 18-10-2018 CH53_1509 f3d614e8e3922701e336ef7ecc434787 325 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 165 303 5.5E-12 T 18-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 CH53_1430 a6ef34495f3a1a5449f73d25b3844e55 209 Pfam PF03433 EspA-like secreted protein 46 196 2.5E-44 T 18-10-2018 IPR005095 EspA-like secreted protein CH53_1430 a6ef34495f3a1a5449f73d25b3844e55 209 SUPERFAMILY SSF116927 50 206 8.89E-55 T 18-10-2018 IPR035074 EspA/CesA-like CH53_1678 bf7f69a69ed6d5f3a0335252bf0431f2 216 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 6 204 2.2E-65 T 18-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 CH53_1678 bf7f69a69ed6d5f3a0335252bf0431f2 216 Gene3D G3DSA:1.20.950.20 1 215 7.6E-74 T 18-10-2018 CH53_1678 bf7f69a69ed6d5f3a0335252bf0431f2 216 Pfam PF01292 Prokaryotic cytochrome b561 9 184 2.0E-22 T 18-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CH53_1678 bf7f69a69ed6d5f3a0335252bf0431f2 216 SUPERFAMILY SSF81342 4 210 1.8E-56 T 18-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CH53_1122 6af2a8817ef1b080e4421447050211d0 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 1.1E-13 T 18-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CH53_1122 6af2a8817ef1b080e4421447050211d0 53 PIRSF PIRSF036466 1 53 2.7E-19 T 18-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CH53_1122 6af2a8817ef1b080e4421447050211d0 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 53 18.608 T 18-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CH53_1718 c08d3e8aee833c0fdf156a1c08bdb7c8 320 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 43 56 - T 18-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CH53_1718 c08d3e8aee833c0fdf156a1c08bdb7c8 320 Gene3D G3DSA:3.40.50.1100 8 308 2.0E-109 T 18-10-2018 CH53_1718 c08d3e8aee833c0fdf156a1c08bdb7c8 320 SUPERFAMILY SSF53686 6 308 4.45E-92 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH53_1718 c08d3e8aee833c0fdf156a1c08bdb7c8 320 Gene3D G3DSA:3.40.50.1100 51 147 2.0E-109 T 18-10-2018 CH53_1718 c08d3e8aee833c0fdf156a1c08bdb7c8 320 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 305 3.5E-83 T 18-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CH53_3768 e1d1f25d1fe7e2b1477f557c9df6fa06 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.193 T 18-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CH53_3768 e1d1f25d1fe7e2b1477f557c9df6fa06 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.5E-118 T 18-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CH53_3768 e1d1f25d1fe7e2b1477f557c9df6fa06 284 Pfam PF00793 DAHP synthetase I family 10 275 4.5E-67 T 18-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CH53_3768 e1d1f25d1fe7e2b1477f557c9df6fa06 284 SUPERFAMILY SSF51569 3 279 3.48E-102 T 18-10-2018 CH53_3768 e1d1f25d1fe7e2b1477f557c9df6fa06 284 Gene3D G3DSA:3.20.20.70 1 284 2.5E-97 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_1383 84594291a64de9b3d0d94591440905ac 361 SUPERFAMILY SSF56935 71 361 2.63E-8 T 18-10-2018 CH53_905 d601162594f8ae67d1dfaed0c8c49f6c 532 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 351 530 5.4E-17 T 18-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal CH53_905 d601162594f8ae67d1dfaed0c8c49f6c 532 Pfam PF15864 Protein glycosylation ligase 150 175 2.8E-10 T 18-10-2018 IPR031726 Protein glycosylation ligase domain CH53_905 d601162594f8ae67d1dfaed0c8c49f6c 532 Pfam PF04932 O-Antigen ligase 189 330 1.5E-15 T 18-10-2018 IPR007016 O-antigen ligase-related CH53_2547 dbdc6609962ba285905f6f09d313f59a 200 Pfam PF00419 Fimbrial protein 47 199 8.7E-13 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_2547 dbdc6609962ba285905f6f09d313f59a 200 Gene3D G3DSA:2.60.40.1090 44 199 4.9E-25 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_2547 dbdc6609962ba285905f6f09d313f59a 200 SUPERFAMILY SSF49401 54 200 5.97E-22 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_3888 71e4cb2a2d3ccc73afcbdfd9f5348094 180 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.598 T 18-10-2018 IPR006008 Intracellular septation protein A GO:0016021 CH53_3888 71e4cb2a2d3ccc73afcbdfd9f5348094 180 Pfam PF04279 Intracellular septation protein A 1 175 5.1E-71 T 18-10-2018 IPR006008 Intracellular septation protein A GO:0016021 CH53_3888 71e4cb2a2d3ccc73afcbdfd9f5348094 180 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 4.8E-71 T 18-10-2018 IPR006008 Intracellular septation protein A GO:0016021 CH53_3410 f7eb7f105f60acf397ef5e9fd6c9ddb2 217 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 10 209 4.5E-45 T 18-10-2018 IPR017732 Type IV / VI secretion system, DotU CH53_3410 f7eb7f105f60acf397ef5e9fd6c9ddb2 217 Gene3D G3DSA:1.25.40.590 2 183 3.1E-56 T 18-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily CH53_3410 f7eb7f105f60acf397ef5e9fd6c9ddb2 217 Pfam PF09850 Type VI secretion system protein DotU 11 204 1.5E-43 T 18-10-2018 IPR017732 Type IV / VI secretion system, DotU CH53_946 fa242bc07444e7901fc7b04aba8e7d2d 120 PIRSF PIRSF006113 1 120 4.4E-54 T 18-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 CH53_946 fa242bc07444e7901fc7b04aba8e7d2d 120 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 3 120 5.7E-38 T 18-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 CH53_946 fa242bc07444e7901fc7b04aba8e7d2d 120 Gene3D G3DSA:3.30.479.10 1 120 2.7E-50 T 18-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 CH53_946 fa242bc07444e7901fc7b04aba8e7d2d 120 SUPERFAMILY SSF55620 3 119 5.45E-41 T 18-10-2018 CH53_946 fa242bc07444e7901fc7b04aba8e7d2d 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 3.3E-34 T 18-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 CH53_946 fa242bc07444e7901fc7b04aba8e7d2d 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 6 120 2.0E-35 T 18-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 CH53_1186 22c533d1418177040770929de0bc3255 305 SUPERFAMILY SSF53850 92 301 1.56E-36 T 18-10-2018 CH53_1186 22c533d1418177040770929de0bc3255 305 SUPERFAMILY SSF46785 5 86 1.73E-19 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1186 22c533d1418177040770929de0bc3255 305 Gene3D G3DSA:3.40.190.290 94 297 2.0E-46 T 18-10-2018 CH53_1186 22c533d1418177040770929de0bc3255 305 Pfam PF03466 LysR substrate binding domain 92 298 5.9E-35 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_1186 22c533d1418177040770929de0bc3255 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.1E-14 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1186 22c533d1418177040770929de0bc3255 305 Gene3D G3DSA:1.10.10.10 5 91 9.3E-25 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2149 56ffb990fe3f3b9f25336ffa6d36b411 822 PIRSF PIRSF000437 19 812 0.0 T 18-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 CH53_2149 56ffb990fe3f3b9f25336ffa6d36b411 822 SUPERFAMILY SSF69593 270 487 1.03E-25 T 18-10-2018 CH53_2149 56ffb990fe3f3b9f25336ffa6d36b411 822 PIRSF PIRSF500064 2 815 0.0 T 18-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 CH53_2149 56ffb990fe3f3b9f25336ffa6d36b411 822 SMART SM00563 299 426 6.3E-28 T 18-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CH53_2149 56ffb990fe3f3b9f25336ffa6d36b411 822 Pfam PF01553 Acyltransferase 281 423 3.6E-26 T 18-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CH53_2149 56ffb990fe3f3b9f25336ffa6d36b411 822 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 798 0.0 T 18-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 CH53_2149 56ffb990fe3f3b9f25336ffa6d36b411 822 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 806 32.729 T 18-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 CH53_3793 2db167c392217027631452fe80b62090 131 Pfam PF01124 MAPEG family 4 120 1.7E-25 T 18-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CH53_3793 2db167c392217027631452fe80b62090 131 SUPERFAMILY SSF161084 4 125 9.42E-31 T 18-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily CH53_3793 2db167c392217027631452fe80b62090 131 Gene3D G3DSA:1.20.120.550 1 128 1.4E-25 T 18-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily CH53_4422 a7eb8783ec48cf598dd25e295f04ad52 129 Pfam PF07233 Protein of unknown function (DUF1425) 38 127 1.7E-26 T 18-10-2018 IPR010824 Protein of unknown function DUF1425 CH53_4422 a7eb8783ec48cf598dd25e295f04ad52 129 Gene3D G3DSA:2.60.40.3230 24 128 1.6E-22 T 18-10-2018 IPR038483 YcfL-like superfamily CH53_3336 d423493033a9ff7fa21c172d5f2ec4c5 503 SMART SM00382 284 480 1.9E-4 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3336 d423493033a9ff7fa21c172d5f2ec4c5 503 SMART SM00382 33 223 4.4E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3336 d423493033a9ff7fa21c172d5f2ec4c5 503 SUPERFAMILY SSF52540 9 234 4.72E-54 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3336 d423493033a9ff7fa21c172d5f2ec4c5 503 Pfam PF00005 ABC transporter 275 429 1.2E-17 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3336 d423493033a9ff7fa21c172d5f2ec4c5 503 SUPERFAMILY SSF52540 270 488 9.69E-39 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3336 d423493033a9ff7fa21c172d5f2ec4c5 503 Gene3D G3DSA:3.40.50.300 264 494 1.5E-37 T 18-10-2018 CH53_3336 d423493033a9ff7fa21c172d5f2ec4c5 503 Gene3D G3DSA:3.40.50.300 2 248 8.2E-56 T 18-10-2018 CH53_3336 d423493033a9ff7fa21c172d5f2ec4c5 503 Pfam PF00005 ABC transporter 24 175 3.8E-26 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3336 d423493033a9ff7fa21c172d5f2ec4c5 503 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_1432 f75d628edede7cb57651df655057cf72 71 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 4 70 2.6E-15 T 18-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 CH53_1432 f75d628edede7cb57651df655057cf72 71 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 4 69 3.2E-19 T 18-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 CH53_3454 91c13cd4f3c2bd4b985d3afeac7b0298 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 153 1.3E-23 T 18-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ CH53_1207 8ffdb8590cba10bbf23c9fe26995783d 205 TIGRFAM TIGR03979 His_Ser_Rich: His-Xaa-Ser repeat protein HxsA 4 203 2.1E-56 T 18-10-2018 IPR023928 Conserved hypothetical protein CHP03979 CH53_1207 8ffdb8590cba10bbf23c9fe26995783d 205 SUPERFAMILY SSF47090 138 201 9.16E-10 T 18-10-2018 IPR036365 PGBD-like superfamily CH53_1207 8ffdb8590cba10bbf23c9fe26995783d 205 Gene3D G3DSA:1.10.101.10 137 201 6.7E-6 T 18-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 CH53_35 ccfad196d7e2e0d663653c59d30dd1a5 182 SUPERFAMILY SSF55729 1 154 2.16E-15 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_35 ccfad196d7e2e0d663653c59d30dd1a5 182 Gene3D G3DSA:3.40.630.30 1 152 4.7E-14 T 18-10-2018 CH53_3040 1c0b34b672b5adfe55f93fb074a26977 311 Pfam PF13407 Periplasmic binding protein domain 28 290 1.9E-57 T 18-10-2018 IPR025997 Periplasmic binding protein CH53_3040 1c0b34b672b5adfe55f93fb074a26977 311 SUPERFAMILY SSF53822 28 311 2.52E-71 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_3040 1c0b34b672b5adfe55f93fb074a26977 311 Gene3D G3DSA:3.40.50.2300 134 272 2.7E-98 T 18-10-2018 CH53_3040 1c0b34b672b5adfe55f93fb074a26977 311 Gene3D G3DSA:3.40.50.2300 31 287 2.7E-98 T 18-10-2018 CH53_1691 e7e2865d78c3afc5b88e33b072213b7d 158 SUPERFAMILY SSF158668 1 144 1.57E-50 T 18-10-2018 IPR038026 MtlR-like superfamily CH53_1691 e7e2865d78c3afc5b88e33b072213b7d 158 Pfam PF05068 Mannitol repressor 2 144 7.0E-55 T 18-10-2018 IPR007761 Mannitol repressor MtlR-like CH53_1691 e7e2865d78c3afc5b88e33b072213b7d 158 Gene3D G3DSA:1.20.120.330 1 145 2.1E-54 T 18-10-2018 CH53_4358 bee13a40a0d2f9f459d21d3f9c95afcd 742 Pfam PF07715 TonB-dependent Receptor Plug Domain 96 187 9.1E-10 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain CH53_4358 bee13a40a0d2f9f459d21d3f9c95afcd 742 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 62 - T 18-10-2018 IPR010916 TonB box, conserved site CH53_4358 bee13a40a0d2f9f459d21d3f9c95afcd 742 Pfam PF00593 TonB dependent receptor 270 740 1.2E-27 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CH53_4358 bee13a40a0d2f9f459d21d3f9c95afcd 742 Gene3D G3DSA:2.170.130.10 92 208 1.3E-16 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CH53_4358 bee13a40a0d2f9f459d21d3f9c95afcd 742 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 725 742 - T 18-10-2018 IPR010917 TonB-dependent receptor, conserved site CH53_4358 bee13a40a0d2f9f459d21d3f9c95afcd 742 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 98 742 9.1E-147 T 18-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CH53_4358 bee13a40a0d2f9f459d21d3f9c95afcd 742 SUPERFAMILY SSF56935 51 742 5.86E-84 T 18-10-2018 CH53_4358 bee13a40a0d2f9f459d21d3f9c95afcd 742 Gene3D G3DSA:2.40.170.20 209 742 7.8E-66 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CH53_1676 d56d87a60f8db1c32088abd151414359 462 Pfam PF12390 Selenocysteine synthase N terminal 9 48 2.9E-8 T 18-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CH53_1676 d56d87a60f8db1c32088abd151414359 462 Gene3D G3DSA:3.40.640.10 94 358 3.2E-150 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_1676 d56d87a60f8db1c32088abd151414359 462 Pfam PF03841 L-seryl-tRNA selenium transferase 82 450 3.6E-166 T 18-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CH53_1676 d56d87a60f8db1c32088abd151414359 462 Gene3D G3DSA:3.90.1150.110 11 452 3.2E-150 T 18-10-2018 CH53_1676 d56d87a60f8db1c32088abd151414359 462 SUPERFAMILY SSF53383 73 344 1.19E-40 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_1676 d56d87a60f8db1c32088abd151414359 462 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 462 238.702 T 18-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CH53_1676 d56d87a60f8db1c32088abd151414359 462 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 459 1.4E-178 T 18-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CH53_2223 baa55b00a7cc5703122d079d45540467 216 TIGRFAM TIGR03579 EF_0833: conserved hypothetical protein EF_0833/AHA_3914 7 215 4.5E-118 T 18-10-2018 IPR025456 Protein of unknown function DUF4310 CH53_2223 baa55b00a7cc5703122d079d45540467 216 Pfam PF14187 Domain of unknown function (DUF4310) 6 213 1.5E-105 T 18-10-2018 IPR025456 Protein of unknown function DUF4310 CH53_34 ac56f91b146a1b081b2b276b18c0332f 150 Gene3D G3DSA:3.10.180.10 19 148 1.2E-43 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_34 ac56f91b146a1b081b2b276b18c0332f 150 SUPERFAMILY SSF54593 22 146 1.82E-15 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_2307 50b2be22fc29a087a2c4114f7d87a662 312 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 5 312 4.1E-47 T 18-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CH53_2307 50b2be22fc29a087a2c4114f7d87a662 312 SMART SM00869 31 301 4.2E-18 T 18-10-2018 IPR005546 Autotransporter beta-domain CH53_2307 50b2be22fc29a087a2c4114f7d87a662 312 SUPERFAMILY SSF103515 3 312 2.09E-35 T 18-10-2018 IPR036709 Autotransporter beta-domain superfamily CH53_2307 50b2be22fc29a087a2c4114f7d87a662 312 Pfam PF03797 Autotransporter beta-domain 34 287 5.0E-27 T 18-10-2018 IPR005546 Autotransporter beta-domain CH53_2307 50b2be22fc29a087a2c4114f7d87a662 312 Gene3D G3DSA:2.40.128.130 1 312 1.3E-60 T 18-10-2018 IPR036709 Autotransporter beta-domain superfamily CH53_4081 80f0ce318df5fa6694dbfbecc2b7d611 105 SUPERFAMILY SSF141488 28 102 2.62E-22 T 18-10-2018 IPR036328 C-type lysozyme inhibitor superfamily CH53_4081 80f0ce318df5fa6694dbfbecc2b7d611 105 Gene3D G3DSA:2.40.128.200 28 104 1.6E-25 T 18-10-2018 IPR036328 C-type lysozyme inhibitor superfamily CH53_4081 80f0ce318df5fa6694dbfbecc2b7d611 105 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 34 95 4.2E-16 T 18-10-2018 IPR018660 C-type lysozyme inhibitor CH53_1478 7ecc7f51422c79337b9ed86dd6a27062 123 Gene3D G3DSA:2.40.150.20 1 123 9.1E-57 T 18-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 CH53_1478 7ecc7f51422c79337b9ed86dd6a27062 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.351 T 18-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CH53_1478 7ecc7f51422c79337b9ed86dd6a27062 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.2E-59 T 18-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CH53_1478 7ecc7f51422c79337b9ed86dd6a27062 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 18-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1478 7ecc7f51422c79337b9ed86dd6a27062 123 SMART SM01374 1 123 1.5E-85 T 18-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CH53_1478 7ecc7f51422c79337b9ed86dd6a27062 123 SUPERFAMILY SSF50193 2 122 5.89E-51 T 18-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 CH53_1478 7ecc7f51422c79337b9ed86dd6a27062 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 1.9E-54 T 18-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CH53_1591 25a53498150e84ea18ecf0e8fc06ae06 166 Gene3D G3DSA:3.40.630.30 1 163 8.6E-42 T 18-10-2018 CH53_1591 25a53498150e84ea18ecf0e8fc06ae06 166 SUPERFAMILY SSF55729 3 162 1.92E-38 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_1591 25a53498150e84ea18ecf0e8fc06ae06 166 Pfam PF00583 Acetyltransferase (GNAT) family 35 137 4.4E-20 T 18-10-2018 IPR000182 GNAT domain CH53_3359 c05786419bd3f2e91c0af38937539d75 165 TIGRFAM TIGR04493 microcomp_PduM: microcompartment protein PduM 9 161 2.4E-54 T 18-10-2018 IPR030992 Microcompartment protein PduM GO:0005198 CH53_3359 c05786419bd3f2e91c0af38937539d75 165 Pfam PF15953 Putative propanediol utilisation 9 160 1.9E-40 T 18-10-2018 IPR030992 Microcompartment protein PduM GO:0005198 CH53_2261 c9b4d2b8e334c5b5d7746efeb76b799a 134 PIRSF PIRSF006318 1 134 3.9E-52 T 18-10-2018 IPR009386 Protein of unknown function DUF1043 CH53_2261 c9b4d2b8e334c5b5d7746efeb76b799a 134 Pfam PF06295 Protein of unknown function (DUF1043) 6 127 9.8E-51 T 18-10-2018 IPR009386 Protein of unknown function DUF1043 CH53_2669 3934f80aa1dbf9b2568e18e2db19e305 214 Gene3D G3DSA:3.40.30.10 1 214 3.4E-50 T 18-10-2018 CH53_2669 3934f80aa1dbf9b2568e18e2db19e305 214 Pfam PF01323 DSBA-like thioredoxin domain 9 185 2.9E-9 T 18-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CH53_2669 3934f80aa1dbf9b2568e18e2db19e305 214 SUPERFAMILY SSF52833 4 196 3.48E-31 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_985 ff7f07be7fb60f6b91b109d8ca746962 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 14 113 8.0E-40 T 18-10-2018 CH53_985 ff7f07be7fb60f6b91b109d8ca746962 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 21 106 3.1E-10 T 18-10-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like CH53_985 ff7f07be7fb60f6b91b109d8ca746962 115 Gene3D G3DSA:1.20.58.1630 23 114 4.9E-11 T 18-10-2018 IPR038432 PulS/OutS-like superfamily CH53_3352 1d66eff530839dcdb22bd811cd6b9821 116 Gene3D G3DSA:3.30.70.1710 1 116 1.8E-52 T 18-10-2018 CH53_3352 1d66eff530839dcdb22bd811cd6b9821 116 PIRSF PIRSF012296 1 116 9.7E-57 T 18-10-2018 IPR009307 Ethanolamine utilisation EutS GO:0031469 CH53_3352 1d66eff530839dcdb22bd811cd6b9821 116 Pfam PF00936 BMC domain 45 109 6.3E-13 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_3352 1d66eff530839dcdb22bd811cd6b9821 116 SMART SM00877 44 116 3.0E-17 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_3352 1d66eff530839dcdb22bd811cd6b9821 116 SUPERFAMILY SSF143414 44 108 3.53E-14 T 18-10-2018 IPR037233 CcmK-like superfamily CH53_3845 2fdb3e3c47a6e0fb0e8f1133af8d54c0 256 SUPERFAMILY SSF56935 31 255 2.62E-5 T 18-10-2018 CH53_3845 2fdb3e3c47a6e0fb0e8f1133af8d54c0 256 Pfam PF06629 MltA-interacting protein MipA 35 255 4.0E-56 T 18-10-2018 IPR010583 MltA-interacting MipA CH53_3777 f2c2d4b332746f2b0a2cf9081a218dfe 187 Gene3D G3DSA:3.15.10.40 17 187 1.8E-70 T 18-10-2018 CH53_3777 f2c2d4b332746f2b0a2cf9081a218dfe 187 Pfam PF07273 Protein of unknown function (DUF1439) 29 180 6.5E-58 T 18-10-2018 IPR010835 Protein of unknown function DUF1439 CH53_1602 d7a7a51e25c2135a94aafedee5187bc8 292 Gene3D G3DSA:1.10.10.10 6 95 6.5E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1602 d7a7a51e25c2135a94aafedee5187bc8 292 Gene3D G3DSA:3.40.190.10 163 259 4.5E-59 T 18-10-2018 CH53_1602 d7a7a51e25c2135a94aafedee5187bc8 292 SUPERFAMILY SSF46785 2 86 3.54E-21 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1602 d7a7a51e25c2135a94aafedee5187bc8 292 Pfam PF03466 LysR substrate binding domain 93 289 2.6E-36 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_1602 d7a7a51e25c2135a94aafedee5187bc8 292 SUPERFAMILY SSF53850 83 290 1.23E-34 T 18-10-2018 CH53_1602 d7a7a51e25c2135a94aafedee5187bc8 292 Gene3D G3DSA:3.40.190.10 103 285 4.5E-59 T 18-10-2018 CH53_1602 d7a7a51e25c2135a94aafedee5187bc8 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.7E-19 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1602 d7a7a51e25c2135a94aafedee5187bc8 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.7E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1602 d7a7a51e25c2135a94aafedee5187bc8 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.7E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1602 d7a7a51e25c2135a94aafedee5187bc8 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.7E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_549 36516df81ef27d3a629d0c1c8a722d42 308 PIRSF PIRSF000166 2 303 9.6E-129 T 18-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CH53_549 36516df81ef27d3a629d0c1c8a722d42 308 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 18-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CH53_549 36516df81ef27d3a629d0c1c8a722d42 308 SUPERFAMILY SSF102886 4 302 2.35E-139 T 18-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CH53_549 36516df81ef27d3a629d0c1c8a722d42 308 Gene3D G3DSA:3.40.1500.10 1 302 1.4E-136 T 18-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CH53_549 36516df81ef27d3a629d0c1c8a722d42 308 Pfam PF01218 Coproporphyrinogen III oxidase 9 302 3.1E-132 T 18-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CH53_549 36516df81ef27d3a629d0c1c8a722d42 308 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 57.221 T 18-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CH53_549 36516df81ef27d3a629d0c1c8a722d42 308 PRINTS PR00073 Coprogen oxidase signature 262 288 2.8E-85 T 18-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CH53_549 36516df81ef27d3a629d0c1c8a722d42 308 PRINTS PR00073 Coprogen oxidase signature 48 69 2.8E-85 T 18-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CH53_549 36516df81ef27d3a629d0c1c8a722d42 308 PRINTS PR00073 Coprogen oxidase signature 90 114 2.8E-85 T 18-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CH53_549 36516df81ef27d3a629d0c1c8a722d42 308 PRINTS PR00073 Coprogen oxidase signature 31 47 2.8E-85 T 18-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CH53_549 36516df81ef27d3a629d0c1c8a722d42 308 PRINTS PR00073 Coprogen oxidase signature 162 191 2.8E-85 T 18-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CH53_549 36516df81ef27d3a629d0c1c8a722d42 308 PRINTS PR00073 Coprogen oxidase signature 125 147 2.8E-85 T 18-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CH53_549 36516df81ef27d3a629d0c1c8a722d42 308 PRINTS PR00073 Coprogen oxidase signature 234 261 2.8E-85 T 18-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CH53_3770 9e56b3f0cc0ef3e0e898fe13146c5e75 372 Gene3D G3DSA:3.30.70.270 187 352 1.3E-48 T 18-10-2018 CH53_3770 9e56b3f0cc0ef3e0e898fe13146c5e75 372 SMART SM00267 184 351 5.7E-53 T 18-10-2018 IPR000160 GGDEF domain CH53_3770 9e56b3f0cc0ef3e0e898fe13146c5e75 372 SUPERFAMILY SSF55073 199 350 6.91E-42 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_3770 9e56b3f0cc0ef3e0e898fe13146c5e75 372 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 193 351 5.7E-43 T 18-10-2018 IPR000160 GGDEF domain CH53_3770 9e56b3f0cc0ef3e0e898fe13146c5e75 372 Pfam PF00990 Diguanylate cyclase, GGDEF domain 195 347 3.0E-41 T 18-10-2018 IPR000160 GGDEF domain CH53_2512 65f99b204aa76f79b837fe431f85d84a 95 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 2 83 7.6E-29 T 18-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CH53_2512 65f99b204aa76f79b837fe431f85d84a 95 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 83 7.0E-25 T 18-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CH53_2512 65f99b204aa76f79b837fe431f85d84a 95 Gene3D G3DSA:2.40.50.220 1 95 5.4E-34 T 18-10-2018 IPR036677 EutN/Ccml superfamily CH53_2512 65f99b204aa76f79b837fe431f85d84a 95 SUPERFAMILY SSF159133 3 94 1.44E-29 T 18-10-2018 IPR036677 EutN/Ccml superfamily CH53_134 c04978d40676cb4ea0b49ccb73364eef 509 SMART SM00052 256 502 1.7E-96 T 18-10-2018 IPR001633 EAL domain CH53_134 c04978d40676cb4ea0b49ccb73364eef 509 Pfam PF00563 EAL domain 262 497 2.4E-61 T 18-10-2018 IPR001633 EAL domain CH53_134 c04978d40676cb4ea0b49ccb73364eef 509 Gene3D G3DSA:3.20.20.450 256 508 3.6E-81 T 18-10-2018 IPR035919 EAL domain superfamily CH53_134 c04978d40676cb4ea0b49ccb73364eef 509 SUPERFAMILY SSF141868 262 507 3.66E-75 T 18-10-2018 IPR035919 EAL domain superfamily CH53_134 c04978d40676cb4ea0b49ccb73364eef 509 Pfam PF12792 CSS motif domain associated with EAL 43 231 3.5E-35 T 18-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CH53_283 5ec7d67a71d2c19f9cfcc14ae4fb8def 197 PIRSF PIRSF012337 1 196 4.6E-56 T 18-10-2018 IPR014462 Phage-associated protein Gp45 CH53_283 5ec7d67a71d2c19f9cfcc14ae4fb8def 197 Pfam PF06890 Bacteriophage Mu Gp45 protein 22 176 7.7E-44 T 18-10-2018 IPR014462 Phage-associated protein Gp45 CH53_455 26ea3a42b043516d295cd43f0157ee60 394 Gene3D G3DSA:1.10.443.10 206 389 8.8E-21 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CH53_455 26ea3a42b043516d295cd43f0157ee60 394 Pfam PF13356 Arm DNA-binding domain 3 88 2.8E-15 T 18-10-2018 IPR025166 Integrase, DNA-binding domain CH53_455 26ea3a42b043516d295cd43f0157ee60 394 SUPERFAMILY SSF56349 98 380 1.68E-63 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CH53_455 26ea3a42b043516d295cd43f0157ee60 394 Pfam PF00589 Phage integrase family 206 370 2.4E-25 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CH53_455 26ea3a42b043516d295cd43f0157ee60 394 Gene3D G3DSA:1.10.150.130 93 205 7.4E-31 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal CH53_455 26ea3a42b043516d295cd43f0157ee60 394 Gene3D G3DSA:3.30.160.390 1 88 7.3E-28 T 18-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CH53_2684 e4a8018ba4a4cd3ecda2b7f63f99eae4 175 Gene3D G3DSA:3.90.79.10 1 160 5.0E-53 T 18-10-2018 CH53_2684 e4a8018ba4a4cd3ecda2b7f63f99eae4 175 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 38.099 T 18-10-2018 IPR022927 RNA pyrophosphohydrolase RppH CH53_2684 e4a8018ba4a4cd3ecda2b7f63f99eae4 175 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 18-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CH53_2684 e4a8018ba4a4cd3ecda2b7f63f99eae4 175 Pfam PF00293 NUDIX domain 7 146 1.3E-28 T 18-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CH53_2684 e4a8018ba4a4cd3ecda2b7f63f99eae4 175 SUPERFAMILY SSF55811 6 155 5.82E-33 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CH53_2684 e4a8018ba4a4cd3ecda2b7f63f99eae4 175 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.2E-8 T 18-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CH53_2684 e4a8018ba4a4cd3ecda2b7f63f99eae4 175 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.2E-8 T 18-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CH53_4056 456034a6a302a6c780c733603ec2ab9c 353 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 348 39.676 T 18-10-2018 IPR006507 Uncharacterised protein family UPF0283 CH53_4056 456034a6a302a6c780c733603ec2ab9c 353 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 57 342 1.3E-136 T 18-10-2018 IPR006507 Uncharacterised protein family UPF0283 CH53_4056 456034a6a302a6c780c733603ec2ab9c 353 Pfam PF05128 Domain of unknown function (DUF697) 183 342 2.5E-57 T 18-10-2018 IPR021147 Protein of unknown function DUF697 CH53_3696 f721e16a67b9962df84fe62c947b13ef 259 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 4.0E-30 T 18-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CH53_3696 f721e16a67b9962df84fe62c947b13ef 259 SUPERFAMILY SSF51658 1 257 6.08E-81 T 18-10-2018 IPR036237 Xylose isomerase-like superfamily CH53_3696 f721e16a67b9962df84fe62c947b13ef 259 Gene3D G3DSA:3.20.20.150 1 259 3.1E-73 T 18-10-2018 CH53_3696 f721e16a67b9962df84fe62c947b13ef 259 PIRSF PIRSF006241 1 259 1.1E-88 T 18-10-2018 IPR026040 Hydroxypyruvate isomerase-like CH53_106 9fd197e3c160b15fe0cffed4d2a3497f 105 SUPERFAMILY SSF141255 4 96 2.88E-30 T 18-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 CH53_106 9fd197e3c160b15fe0cffed4d2a3497f 105 SMART SM00992 3 102 1.3E-36 T 18-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CH53_106 9fd197e3c160b15fe0cffed4d2a3497f 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 37.56 T 18-10-2018 IPR022866 Heat shock protein HspQ CH53_106 9fd197e3c160b15fe0cffed4d2a3497f 105 Gene3D G3DSA:2.30.30.390 1 105 2.1E-39 T 18-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 CH53_106 9fd197e3c160b15fe0cffed4d2a3497f 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 102 2.8E-32 T 18-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CH53_106 9fd197e3c160b15fe0cffed4d2a3497f 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 9.3E-19 T 18-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CH53_3834 e9fae8b076e5264912009c4a286c6efe 176 SUPERFAMILY SSF158442 15 161 1.44E-45 T 18-10-2018 IPR023380 DsbB-like superfamily CH53_3834 e9fae8b076e5264912009c4a286c6efe 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 7.6E-44 T 18-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CH53_3834 e9fae8b076e5264912009c4a286c6efe 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.336 T 18-10-2018 IPR022920 Disulphide bond formation protein DsbB CH53_3834 e9fae8b076e5264912009c4a286c6efe 176 Gene3D G3DSA:1.20.1550.10 1 176 6.9E-68 T 18-10-2018 IPR023380 DsbB-like superfamily CH53_898 c383659034fb8757ababaee4cc66d3bc 162 Pfam PF00419 Fimbrial protein 29 162 2.7E-17 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_898 c383659034fb8757ababaee4cc66d3bc 162 SUPERFAMILY SSF49401 37 162 4.97E-24 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_898 c383659034fb8757ababaee4cc66d3bc 162 Gene3D G3DSA:2.60.40.1090 40 162 6.4E-33 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_2552 6ea2fde1b23ea075ab23e29ba8575960 449 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 4 447 3.3E-136 T 18-10-2018 IPR010263 Type VI secretion protein, VC_A0114 CH53_2552 6ea2fde1b23ea075ab23e29ba8575960 449 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 446 3.8E-137 T 18-10-2018 IPR010263 Type VI secretion protein, VC_A0114 CH53_1033 b20b733f38dff8bf3221851c7909ce2f 318 SUPERFAMILY SSF53850 108 313 1.99E-40 T 18-10-2018 CH53_1033 b20b733f38dff8bf3221851c7909ce2f 318 Gene3D G3DSA:1.10.10.10 18 105 3.6E-31 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1033 b20b733f38dff8bf3221851c7909ce2f 318 Pfam PF03466 LysR substrate binding domain 120 312 4.9E-17 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_1033 b20b733f38dff8bf3221851c7909ce2f 318 Gene3D G3DSA:3.40.190.10 189 286 8.7E-37 T 18-10-2018 CH53_1033 b20b733f38dff8bf3221851c7909ce2f 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 85 6.7E-18 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1033 b20b733f38dff8bf3221851c7909ce2f 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 63 74 4.9E-8 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1033 b20b733f38dff8bf3221851c7909ce2f 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.9E-8 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1033 b20b733f38dff8bf3221851c7909ce2f 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 63 4.9E-8 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_1033 b20b733f38dff8bf3221851c7909ce2f 318 SUPERFAMILY SSF46785 22 101 9.98E-21 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1033 b20b733f38dff8bf3221851c7909ce2f 318 Gene3D G3DSA:3.40.190.10 108 310 8.7E-37 T 18-10-2018 CH53_1463 168dd33bfe0eb11c2695cc766dc93037 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 7.5E-24 T 18-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_1463 168dd33bfe0eb11c2695cc766dc93037 329 SMART SM00662 23 234 1.4E-105 T 18-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_1463 168dd33bfe0eb11c2695cc766dc93037 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 5.8E-113 T 18-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_1463 168dd33bfe0eb11c2695cc766dc93037 329 SUPERFAMILY SSF55257 6 231 1.57E-30 T 18-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_1463 168dd33bfe0eb11c2695cc766dc93037 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 18-10-2018 CH53_1463 168dd33bfe0eb11c2695cc766dc93037 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 18-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_1463 168dd33bfe0eb11c2695cc766dc93037 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.627 T 18-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_1463 168dd33bfe0eb11c2695cc766dc93037 329 SUPERFAMILY SSF56553 53 178 2.09E-41 T 18-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_1463 168dd33bfe0eb11c2695cc766dc93037 329 Gene3D G3DSA:2.170.120.12 53 177 4.1E-86 T 18-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_1463 168dd33bfe0eb11c2695cc766dc93037 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 18-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_1463 168dd33bfe0eb11c2695cc766dc93037 329 Gene3D G3DSA:1.10.150.20 244 329 9.7E-39 T 18-10-2018 CH53_1463 168dd33bfe0eb11c2695cc766dc93037 329 Gene3D G3DSA:3.30.1360.10 17 228 4.1E-86 T 18-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_1463 168dd33bfe0eb11c2695cc766dc93037 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.7E-23 T 18-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CH53_3689 74b634a4ee2dc140f7e6b204c80c3c16 452 PIRSF PIRSF005348 18 452 1.6E-158 T 18-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 CH53_3689 74b634a4ee2dc140f7e6b204c80c3c16 452 Pfam PF03390 2-hydroxycarboxylate transporter family 37 445 1.9E-148 T 18-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 CH53_3259 56d4e9cbc03be29c91f3d4be63bd8775 219 SUPERFAMILY SSF52540 1 218 2.97E-68 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3259 56d4e9cbc03be29c91f3d4be63bd8775 219 SMART SM00382 30 217 1.9E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3259 56d4e9cbc03be29c91f3d4be63bd8775 219 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3259 56d4e9cbc03be29c91f3d4be63bd8775 219 Gene3D G3DSA:3.40.50.300 1 219 3.3E-62 T 18-10-2018 CH53_3259 56d4e9cbc03be29c91f3d4be63bd8775 219 Pfam PF00005 ABC transporter 22 169 2.7E-33 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1976 1da3307f313bd9f49114485de00c9d12 355 Gene3D G3DSA:3.40.50.720 3 326 8.8E-138 T 18-10-2018 CH53_1976 1da3307f313bd9f49114485de00c9d12 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 341 5.0E-159 T 18-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CH53_1976 1da3307f313bd9f49114485de00c9d12 355 Gene3D G3DSA:3.90.25.10 202 335 8.8E-138 T 18-10-2018 CH53_1976 1da3307f313bd9f49114485de00c9d12 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 1.5E-98 T 18-10-2018 IPR016040 NAD(P)-binding domain CH53_1976 1da3307f313bd9f49114485de00c9d12 355 SUPERFAMILY SSF51735 3 339 2.64E-93 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3150 e211fdb9e6bac4d607a6ed32253915e2 97 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 17 94 5.4E-30 T 18-10-2018 IPR011846 Cyd operon protein YbgE CH53_3150 e211fdb9e6bac4d607a6ed32253915e2 97 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 6 97 2.8E-39 T 18-10-2018 IPR011846 Cyd operon protein YbgE CH53_458 4d301a777601a5a51c0c686bc7f4dc00 390 SMART SM00974 276 359 1.2E-29 T 18-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding CH53_458 4d301a777601a5a51c0c686bc7f4dc00 390 Pfam PF10544 T5orf172 domain 266 357 1.1E-15 T 18-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding CH53_349 da550a0b7bac550f84b359868a993c9b 397 SMART SM00852 5 172 6.1E-33 T 18-10-2018 IPR001453 MoaB/Mog domain CH53_349 da550a0b7bac550f84b359868a993c9b 397 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 165 2.7E-32 T 18-10-2018 IPR001453 MoaB/Mog domain CH53_349 da550a0b7bac550f84b359868a993c9b 397 Pfam PF00994 Probable molybdopterin binding domain 6 170 9.9E-33 T 18-10-2018 IPR001453 MoaB/Mog domain CH53_349 da550a0b7bac550f84b359868a993c9b 397 SUPERFAMILY SSF53218 1 204 2.49E-37 T 18-10-2018 IPR036425 MoaB/Mog-like domain superfamily CH53_349 da550a0b7bac550f84b359868a993c9b 397 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 396 4.3E-129 T 18-10-2018 IPR008135 Competence-induced protein CinA CH53_349 da550a0b7bac550f84b359868a993c9b 397 Gene3D G3DSA:3.40.980.10 1 172 4.9E-48 T 18-10-2018 IPR036425 MoaB/Mog-like domain superfamily CH53_349 da550a0b7bac550f84b359868a993c9b 397 PIRSF PIRSF006728 1 385 2.5E-113 T 18-10-2018 IPR008135 Competence-induced protein CinA CH53_349 da550a0b7bac550f84b359868a993c9b 397 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 397 115.475 T 18-10-2018 IPR008135 Competence-induced protein CinA CH53_1850 cbde49a352dbc037faaa2c53863c6bba 410 Pfam PF00589 Phage integrase family 214 382 3.3E-16 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CH53_1850 cbde49a352dbc037faaa2c53863c6bba 410 Pfam PF13356 Arm DNA-binding domain 4 90 7.8E-11 T 18-10-2018 IPR025166 Integrase, DNA-binding domain CH53_1850 cbde49a352dbc037faaa2c53863c6bba 410 Gene3D G3DSA:1.10.443.10 214 401 2.7E-21 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CH53_1850 cbde49a352dbc037faaa2c53863c6bba 410 SUPERFAMILY SSF56349 108 391 7.06E-56 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CH53_1850 cbde49a352dbc037faaa2c53863c6bba 410 Gene3D G3DSA:1.10.150.130 106 213 2.3E-39 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal CH53_1850 cbde49a352dbc037faaa2c53863c6bba 410 Gene3D G3DSA:3.30.160.390 2 105 5.4E-17 T 18-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CH53_3549 7bdcbca028c4983c94c8326143c47507 99 Pfam PF04316 Anti-sigma-28 factor, FlgM 37 90 3.0E-10 T 18-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CH53_3549 7bdcbca028c4983c94c8326143c47507 99 SUPERFAMILY SSF101498 3 91 1.15E-12 T 18-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily CH53_3549 7bdcbca028c4983c94c8326143c47507 99 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 92 4.3E-19 T 18-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CH53_880 0bb28d7b37e184714801ce3bc0dc1201 302 SUPERFAMILY SSF161098 95 282 8.37E-30 T 18-10-2018 IPR035906 MetI-like superfamily CH53_880 0bb28d7b37e184714801ce3bc0dc1201 302 Gene3D G3DSA:1.10.3720.10 92 296 1.1E-21 T 18-10-2018 IPR035906 MetI-like superfamily CH53_880 0bb28d7b37e184714801ce3bc0dc1201 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 31 78 3.7E-8 T 18-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CH53_880 0bb28d7b37e184714801ce3bc0dc1201 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 301 1.3E-31 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_2342 13b8b457beaf2fa36b6bdf48896991e3 230 Pfam PF06693 Protein of unknown function (DUF1190) 41 214 8.7E-55 T 18-10-2018 IPR009576 Biofilm formation YgiB CH53_2342 13b8b457beaf2fa36b6bdf48896991e3 230 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 230 46.48 T 18-10-2018 IPR009576 Biofilm formation YgiB CH53_4240 6e5b32036dd61eb9b076646baa9d20e6 221 Gene3D G3DSA:3.20.20.70 6 220 1.7E-76 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_4240 6e5b32036dd61eb9b076646baa9d20e6 221 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 8 210 4.6E-29 T 18-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_4240 6e5b32036dd61eb9b076646baa9d20e6 221 SUPERFAMILY SSF51366 7 219 3.83E-36 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CH53_4240 6e5b32036dd61eb9b076646baa9d20e6 221 SMART SM00934 9 211 1.3E-33 T 18-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 SMART SM00319 44 180 7.8E-29 T 18-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 482 6.3E-56 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 SUPERFAMILY SSF47170 38 177 1.57E-40 T 18-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 2.2E-81 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 2.2E-81 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.2E-81 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 2.2E-81 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 2.2E-81 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 2.2E-81 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 2.2E-81 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 SUPERFAMILY SSF58104 234 515 1.02E-75 T 18-10-2018 CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 Pfam PF00672 HAMP domain 217 262 2.5E-7 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 Pfam PF02203 Tar ligand binding domain homologue 1 170 2.0E-49 T 18-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 Gene3D G3DSA:1.20.120.30 22 191 2.1E-41 T 18-10-2018 CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 292 314 - T 18-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 SMART SM00283 267 514 3.5E-101 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 SMART SM00304 214 266 2.0E-9 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CH53_3539 8d6cdf576f997c401dd62a2adf67bb0d 545 Gene3D G3DSA:1.10.287.950 214 516 3.0E-93 T 18-10-2018 CH53_2535 8372012995dc76cabdaf42c9f5d0a177 161 SUPERFAMILY SSF55724 6 156 5.75E-30 T 18-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich CH53_2535 8372012995dc76cabdaf42c9f5d0a177 161 Pfam PF08786 DcrB 12 152 1.4E-27 T 18-10-2018 IPR014894 Protein DcrB CH53_2535 8372012995dc76cabdaf42c9f5d0a177 161 Gene3D G3DSA:3.40.1000.10 5 159 6.9E-29 T 18-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich CH53_4057 90f5874ceb53aef820466a6f63818dc9 465 SUPERFAMILY SSF52540 6 184 6.21E-5 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4057 90f5874ceb53aef820466a6f63818dc9 465 Pfam PF04317 YcjX-like family, DUF463 20 464 4.9E-188 T 18-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein CH53_4057 90f5874ceb53aef820466a6f63818dc9 465 PIRSF PIRSF019381 1 465 2.2E-219 T 18-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein CH53_3263 04d803803d0080c5f393ed16c5cf3ba7 280 Gene3D G3DSA:3.40.50.1820 5 279 4.7E-92 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_3263 04d803803d0080c5f393ed16c5cf3ba7 280 Pfam PF00756 Putative esterase 26 261 1.5E-67 T 18-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CH53_3263 04d803803d0080c5f393ed16c5cf3ba7 280 SUPERFAMILY SSF53474 5 278 9.47E-89 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_3263 04d803803d0080c5f393ed16c5cf3ba7 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 277 1.1E-118 T 18-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 CH53_1244 428719dd4483983e72391c68de9a09be 522 PIRSF PIRSF002741 5 519 5.2E-64 T 18-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CH53_1244 428719dd4483983e72391c68de9a09be 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 439 4.8E-67 T 18-10-2018 IPR000914 Solute-binding protein family 5 domain CH53_1244 428719dd4483983e72391c68de9a09be 522 Gene3D G3DSA:3.10.105.10 283 498 2.0E-96 T 18-10-2018 CH53_1244 428719dd4483983e72391c68de9a09be 522 Gene3D G3DSA:3.40.190.10 202 508 2.0E-96 T 18-10-2018 CH53_1244 428719dd4483983e72391c68de9a09be 522 SUPERFAMILY SSF53850 21 517 6.15E-100 T 18-10-2018 CH53_1244 428719dd4483983e72391c68de9a09be 522 Gene3D G3DSA:3.90.76.10 41 201 2.0E-96 T 18-10-2018 CH53_4231 b17ec086283f20fe52ebcd5970b8b5d2 70 Pfam PF13619 KTSC domain 7 64 1.5E-24 T 18-10-2018 IPR025309 KTSC domain CH53_3283 a8c8a09ccb059497e9b8788c369c9ba1 221 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 22 202 4.0E-53 T 18-10-2018 CH53_3283 a8c8a09ccb059497e9b8788c369c9ba1 221 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 133 216 1.3E-9 T 18-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CH53_3631 2e6c800ae2142fa81a3fd3677135f20e 113 SUPERFAMILY SSF109604 16 108 4.39E-11 T 18-10-2018 CH53_3631 2e6c800ae2142fa81a3fd3677135f20e 113 Gene3D G3DSA:1.10.3210.10 16 113 1.7E-18 T 18-10-2018 CH53_1002 3a1802483b658023dac90ba8981cfc54 512 Pfam PF00437 Type II/IV secretion system protein 141 400 4.7E-81 T 18-10-2018 IPR001482 Type II/IV secretion system protein CH53_1002 3a1802483b658023dac90ba8981cfc54 512 Gene3D G3DSA:3.40.50.300 235 507 1.5E-97 T 18-10-2018 CH53_1002 3a1802483b658023dac90ba8981cfc54 512 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 328 342 - T 18-10-2018 IPR001482 Type II/IV secretion system protein CH53_1002 3a1802483b658023dac90ba8981cfc54 512 SUPERFAMILY SSF160246 12 74 1.57E-6 T 18-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily CH53_1002 3a1802483b658023dac90ba8981cfc54 512 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 18 73 2.2E-4 T 18-10-2018 IPR007831 General secretory system II, protein E, N-terminal CH53_1002 3a1802483b658023dac90ba8981cfc54 512 SUPERFAMILY SSF52540 116 502 3.43E-90 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1002 3a1802483b658023dac90ba8981cfc54 512 Gene3D G3DSA:3.30.450.90 103 234 9.5E-43 T 18-10-2018 CH53_2463 c25ad771baaa8ea2dd5f6b0e7f6f773a 230 SUPERFAMILY SSF52540 24 170 2.13E-10 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2463 c25ad771baaa8ea2dd5f6b0e7f6f773a 230 Gene3D G3DSA:3.40.50.300 23 204 2.3E-6 T 18-10-2018 CH53_2637 2256fb59c52d2eddadae2bac129a4f80 577 Pfam PF02272 DHHA1 domain 322 452 3.4E-27 T 18-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CH53_2637 2256fb59c52d2eddadae2bac129a4f80 577 Gene3D G3DSA:3.90.1640.30 49 326 1.6E-89 T 18-10-2018 CH53_2637 2256fb59c52d2eddadae2bac129a4f80 577 Pfam PF01368 DHH family 74 175 1.0E-8 T 18-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CH53_2637 2256fb59c52d2eddadae2bac129a4f80 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 573 1.6E-161 T 18-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CH53_2637 2256fb59c52d2eddadae2bac129a4f80 577 Gene3D G3DSA:3.10.310.30 328 458 4.4E-31 T 18-10-2018 CH53_2637 2256fb59c52d2eddadae2bac129a4f80 577 SUPERFAMILY SSF64182 48 466 2.49E-117 T 18-10-2018 IPR038763 DHH phosphoesterase superfamily CH53_2637 2256fb59c52d2eddadae2bac129a4f80 577 Gene3D G3DSA:2.40.50.460 459 576 1.6E-7 T 18-10-2018 CH53_4254 80caf3637c81cc45487c14c314ce44be 261 Gene3D G3DSA:3.90.226.10 2 184 4.2E-56 T 18-10-2018 CH53_4254 80caf3637c81cc45487c14c314ce44be 261 Gene3D G3DSA:1.10.12.10 203 260 6.2E-29 T 18-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CH53_4254 80caf3637c81cc45487c14c314ce44be 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 2.7E-43 T 18-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CH53_4254 80caf3637c81cc45487c14c314ce44be 261 SUPERFAMILY SSF52096 1 260 2.65E-60 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CH53_4254 80caf3637c81cc45487c14c314ce44be 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 18-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CH53_1681 0d634f4170f4290edc063389824c1bdf 195 Gene3D G3DSA:2.20.25.90 44 105 1.5E-16 T 18-10-2018 CH53_1681 0d634f4170f4290edc063389824c1bdf 195 Gene3D G3DSA:3.40.50.740 107 195 8.1E-35 T 18-10-2018 CH53_1681 0d634f4170f4290edc063389824c1bdf 195 SMART SM00926 43 104 4.1E-22 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_1681 0d634f4170f4290edc063389824c1bdf 195 SUPERFAMILY SSF53706 36 195 3.8E-57 T 18-10-2018 CH53_1681 0d634f4170f4290edc063389824c1bdf 195 Pfam PF00384 Molybdopterin oxidoreductase 107 156 6.5E-6 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_1681 0d634f4170f4290edc063389824c1bdf 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 18-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 CH53_1681 0d634f4170f4290edc063389824c1bdf 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 103 1.7E-19 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3709 ab43754214662208a8424155afe3000d 237 Pfam PF00005 ABC transporter 33 178 2.4E-32 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3709 ab43754214662208a8424155afe3000d 237 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3709 ab43754214662208a8424155afe3000d 237 SMART SM00382 42 226 2.3E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3709 ab43754214662208a8424155afe3000d 237 Gene3D G3DSA:3.40.50.300 15 237 1.3E-67 T 18-10-2018 CH53_3709 ab43754214662208a8424155afe3000d 237 SUPERFAMILY SSF52540 17 234 4.38E-66 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3925 df87fb2b36b94a713f69a3ba6c9e9dd5 104 Pfam PF04328 Selenoprotein, putative 41 104 1.1E-24 T 18-10-2018 IPR007423 Selenoprotein, putative CH53_1134 f6d8f26271876e0869c160acabfbb01d 360 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 345 9.6E-47 T 18-10-2018 IPR000160 GGDEF domain CH53_1134 f6d8f26271876e0869c160acabfbb01d 360 SMART SM00267 179 349 3.7E-53 T 18-10-2018 IPR000160 GGDEF domain CH53_1134 f6d8f26271876e0869c160acabfbb01d 360 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 189 347 4.2E-45 T 18-10-2018 IPR000160 GGDEF domain CH53_1134 f6d8f26271876e0869c160acabfbb01d 360 Gene3D G3DSA:3.30.70.270 176 350 6.3E-51 T 18-10-2018 CH53_1134 f6d8f26271876e0869c160acabfbb01d 360 SUPERFAMILY SSF55073 195 350 7.14E-44 T 18-10-2018 IPR029787 Nucleotide cyclase CH53_4238 76b5f33d7ba870028805b866e41e5b62 332 Gene3D G3DSA:3.30.1370.60 65 270 2.9E-109 T 18-10-2018 CH53_4238 76b5f33d7ba870028805b866e41e5b62 332 Gene3D G3DSA:3.30.60.50 165 220 2.9E-109 T 18-10-2018 CH53_4238 76b5f33d7ba870028805b866e41e5b62 332 Gene3D G3DSA:1.10.1530.10 5 64 2.9E-109 T 18-10-2018 CH53_4238 76b5f33d7ba870028805b866e41e5b62 332 SUPERFAMILY SSF89733 1 331 1.7E-93 T 18-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 CH53_4238 76b5f33d7ba870028805b866e41e5b62 332 Pfam PF02615 Malate/L-lactate dehydrogenase 3 329 2.3E-100 T 18-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 CH53_4238 76b5f33d7ba870028805b866e41e5b62 332 Hamap MF_00820 2,3-diketo-L-gulonate reductase [dlgD]. 1 332 72.532 T 18-10-2018 IPR023689 2,3-diketo-L-gulonate reductase GO:0016616|GO:0047559|GO:0055114|GO:0070403 KEGG: 00040+1.1.1.130|KEGG: 00053+1.1.1.130|MetaCyc: PWY-6961 CH53_2395 26de2f37bc4f53152ed2576c92bd619d 431 Pfam PF00756 Putative esterase 198 426 4.9E-34 T 18-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CH53_2395 26de2f37bc4f53152ed2576c92bd619d 431 SUPERFAMILY SSF81296 17 169 4.34E-44 T 18-10-2018 IPR014756 Immunoglobulin E-set CH53_2395 26de2f37bc4f53152ed2576c92bd619d 431 Gene3D G3DSA:3.40.50.1820 166 430 3.3E-64 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2395 26de2f37bc4f53152ed2576c92bd619d 431 Gene3D G3DSA:2.60.40.10 11 164 1.8E-51 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2395 26de2f37bc4f53152ed2576c92bd619d 431 SUPERFAMILY SSF53474 186 428 2.63E-46 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2395 26de2f37bc4f53152ed2576c92bd619d 431 Pfam PF11806 Domain of unknown function (DUF3327) 46 175 9.6E-41 T 18-10-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 CH53_3720 6ff3b49560d9c7214e6c1c3f37d5c41b 235 SUPERFAMILY SSF55729 28 198 6.88E-36 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_3720 6ff3b49560d9c7214e6c1c3f37d5c41b 235 Gene3D G3DSA:3.40.630.30 14 234 2.9E-58 T 18-10-2018 CH53_3720 6ff3b49560d9c7214e6c1c3f37d5c41b 235 Pfam PF13302 Acetyltransferase (GNAT) domain 50 174 2.6E-14 T 18-10-2018 IPR000182 GNAT domain CH53_1906 565a2fd799ede53726702e8f6e5120c2 105 Hamap MF_00744 Met repressor [metJ]. 1 105 40.23 T 18-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CH53_1906 565a2fd799ede53726702e8f6e5120c2 105 Gene3D G3DSA:1.10.140.10 2 105 7.7E-63 T 18-10-2018 IPR023453 Methionine repressor MetJ domain superfamily CH53_1906 565a2fd799ede53726702e8f6e5120c2 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 5.3E-58 T 18-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CH53_1906 565a2fd799ede53726702e8f6e5120c2 105 SUPERFAMILY SSF47598 2 105 3.78E-57 T 18-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 CH53_1906 565a2fd799ede53726702e8f6e5120c2 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 8.0E-49 T 18-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CH53_1337 e7dfad13249caf564aed8d7ee1a8913c 427 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.453 T 18-10-2018 IPR016496 GTPase HflX GO:0005525 CH53_1337 e7dfad13249caf564aed8d7ee1a8913c 427 Pfam PF01926 50S ribosome-binding GTPase 200 318 7.7E-20 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_1337 e7dfad13249caf564aed8d7ee1a8913c 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 2.8E-9 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_1337 e7dfad13249caf564aed8d7ee1a8913c 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 2.8E-9 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_1337 e7dfad13249caf564aed8d7ee1a8913c 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 2.8E-9 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 CH53_1337 e7dfad13249caf564aed8d7ee1a8913c 427 Gene3D G3DSA:3.40.50.11060 17 138 1.4E-36 T 18-10-2018 CH53_1337 e7dfad13249caf564aed8d7ee1a8913c 427 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.5E-151 T 18-10-2018 IPR016496 GTPase HflX GO:0005525 CH53_1337 e7dfad13249caf564aed8d7ee1a8913c 427 Gene3D G3DSA:3.40.50.300 197 365 7.2E-38 T 18-10-2018 CH53_1337 e7dfad13249caf564aed8d7ee1a8913c 427 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 2.2E-28 T 18-10-2018 IPR032305 GTP-binding protein, middle domain CH53_1337 e7dfad13249caf564aed8d7ee1a8913c 427 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 4.8E-30 T 18-10-2018 IPR025121 GTPase HflX, N-terminal CH53_1337 e7dfad13249caf564aed8d7ee1a8913c 427 PIRSF PIRSF006809 3 421 5.0E-147 T 18-10-2018 IPR016496 GTPase HflX GO:0005525 CH53_1337 e7dfad13249caf564aed8d7ee1a8913c 427 SUPERFAMILY SSF52540 197 375 2.74E-38 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1337 e7dfad13249caf564aed8d7ee1a8913c 427 SUPERFAMILY SSF54980 366 421 7.19E-14 T 18-10-2018 IPR035647 EF-G domain III/V-like CH53_3229 6b87559bd9817a56a8a4a44bf15d0298 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 217 6.5E-23 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_3229 6b87559bd9817a56a8a4a44bf15d0298 232 SUPERFAMILY SSF161098 23 210 4.84E-34 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3229 6b87559bd9817a56a8a4a44bf15d0298 232 Gene3D G3DSA:1.10.3720.10 20 220 6.8E-29 T 18-10-2018 IPR035906 MetI-like superfamily CH53_39 ce2a8e64c6b1e3182090bf9e9fc12a31 387 Hamap MF_01066 Glucans biosynthesis protein C [mdoC]. 1 376 37.378 T 18-10-2018 IPR023723 Glucan biosynthesis protein C GO:0016741 CH53_39 ce2a8e64c6b1e3182090bf9e9fc12a31 387 Pfam PF01757 Acyltransferase family 10 357 2.6E-32 T 18-10-2018 IPR002656 Acyltransferase 3 GO:0016747 CH53_840 122ce0d67ae351477ace1734da038af6 379 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 255 275 - T 18-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CH53_840 122ce0d67ae351477ace1734da038af6 379 SUPERFAMILY SSF56796 7 377 2.62E-116 T 18-10-2018 CH53_840 122ce0d67ae351477ace1734da038af6 379 Pfam PF00465 Iron-containing alcohol dehydrogenase 7 371 7.9E-113 T 18-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CH53_840 122ce0d67ae351477ace1734da038af6 379 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 170 198 - T 18-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CH53_840 122ce0d67ae351477ace1734da038af6 379 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 1 375 4.6E-181 T 18-10-2018 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77 CH53_840 122ce0d67ae351477ace1734da038af6 379 Gene3D G3DSA:1.20.1090.10 183 378 2.0E-63 T 18-10-2018 CH53_840 122ce0d67ae351477ace1734da038af6 379 Gene3D G3DSA:3.40.50.1970 1 181 4.8E-53 T 18-10-2018 CH53_4384 16913daf8698f3afb94db1639d41735c 306 SUPERFAMILY SSF103481 38 138 6.41E-13 T 18-10-2018 CH53_4384 16913daf8698f3afb94db1639d41735c 306 Pfam PF00892 EamA-like transporter family 151 286 7.2E-16 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_4384 16913daf8698f3afb94db1639d41735c 306 Pfam PF00892 EamA-like transporter family 3 135 9.1E-10 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_4384 16913daf8698f3afb94db1639d41735c 306 SUPERFAMILY SSF103481 189 289 2.88E-9 T 18-10-2018 CH53_2639 467da9b0e39ca86611538264bfb1e64e 507 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 23 507 45.128 T 18-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CH53_2639 467da9b0e39ca86611538264bfb1e64e 507 SUPERFAMILY SSF55681 164 504 4.21E-123 T 18-10-2018 CH53_2639 467da9b0e39ca86611538264bfb1e64e 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 246 259 1.5E-39 T 18-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CH53_2639 467da9b0e39ca86611538264bfb1e64e 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 217 233 1.5E-39 T 18-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CH53_2639 467da9b0e39ca86611538264bfb1e64e 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 201 211 1.5E-39 T 18-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CH53_2639 467da9b0e39ca86611538264bfb1e64e 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 388 404 1.5E-39 T 18-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CH53_2639 467da9b0e39ca86611538264bfb1e64e 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 264 281 1.5E-39 T 18-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CH53_2639 467da9b0e39ca86611538264bfb1e64e 507 Gene3D G3DSA:3.30.930.10 157 501 6.7E-135 T 18-10-2018 CH53_2639 467da9b0e39ca86611538264bfb1e64e 507 SUPERFAMILY SSF50249 16 157 2.69E-47 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_2639 467da9b0e39ca86611538264bfb1e64e 507 PIRSF PIRSF039101 1 507 1.8E-199 T 18-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CH53_2639 467da9b0e39ca86611538264bfb1e64e 507 Pfam PF01336 OB-fold nucleic acid binding domain 70 148 3.9E-15 T 18-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CH53_2639 467da9b0e39ca86611538264bfb1e64e 507 Gene3D G3DSA:2.40.50.140 17 156 4.4E-43 T 18-10-2018 CH53_2639 467da9b0e39ca86611538264bfb1e64e 507 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 17 506 4.1E-229 T 18-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CH53_2639 467da9b0e39ca86611538264bfb1e64e 507 Pfam PF00152 tRNA synthetases class II (D, K and N) 164 503 5.2E-83 T 18-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CH53_3889 86783017daeff402d96cc99c5975c14d 577 SUPERFAMILY SSF52091 444 537 3.34E-11 T 18-10-2018 IPR036513 STAS domain superfamily CH53_3889 86783017daeff402d96cc99c5975c14d 577 Gene3D G3DSA:3.30.750.24 436 564 2.9E-20 T 18-10-2018 IPR036513 STAS domain superfamily CH53_3889 86783017daeff402d96cc99c5975c14d 577 Pfam PF00916 Sulfate permease family 24 385 9.2E-88 T 18-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CH53_3889 86783017daeff402d96cc99c5975c14d 577 Pfam PF01740 STAS domain 445 531 3.6E-13 T 18-10-2018 IPR002645 STAS domain CH53_2960 10fc0fe305af84ef13ec9422bc99d9bf 205 SUPERFAMILY SSF46689 8 75 1.33E-13 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_2960 10fc0fe305af84ef13ec9422bc99d9bf 205 SUPERFAMILY SSF48498 88 201 2.1E-25 T 18-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH53_2960 10fc0fe305af84ef13ec9422bc99d9bf 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 34 64 - T 18-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CH53_2960 10fc0fe305af84ef13ec9422bc99d9bf 205 Gene3D G3DSA:1.10.357.10 79 204 9.9E-30 T 18-10-2018 CH53_2960 10fc0fe305af84ef13ec9422bc99d9bf 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 66 4.3E-10 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_2960 10fc0fe305af84ef13ec9422bc99d9bf 205 Gene3D G3DSA:1.10.10.60 8 75 2.6E-25 T 18-10-2018 CH53_38 9d76c0b00dbeb3135ff2a16ed0c0b8a1 517 SUPERFAMILY SSF81296 403 516 1.4E-33 T 18-10-2018 IPR014756 Immunoglobulin E-set CH53_38 9d76c0b00dbeb3135ff2a16ed0c0b8a1 517 SUPERFAMILY SSF74650 29 400 1.76E-164 T 18-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CH53_38 9d76c0b00dbeb3135ff2a16ed0c0b8a1 517 Gene3D G3DSA:2.70.98.10 28 403 3.1E-169 T 18-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CH53_38 9d76c0b00dbeb3135ff2a16ed0c0b8a1 517 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 29 513 4.1E-196 T 18-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 CH53_38 9d76c0b00dbeb3135ff2a16ed0c0b8a1 517 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 5 515 61.799 T 18-10-2018 IPR023704 Glucan biosynthesis protein G CH53_38 9d76c0b00dbeb3135ff2a16ed0c0b8a1 517 PIRSF PIRSF006281 2 517 6.9E-240 T 18-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD CH53_38 9d76c0b00dbeb3135ff2a16ed0c0b8a1 517 Gene3D G3DSA:2.60.40.10 404 517 1.6E-49 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_3659 8df25471aedce5823226268da970747b 509 SUPERFAMILY SSF53041 2 162 2.88E-16 T 18-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 CH53_3659 8df25471aedce5823226268da970747b 509 SMART SM00857 4 165 3.9E-24 T 18-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CH53_3659 8df25471aedce5823226268da970747b 509 Pfam PF07508 Recombinase 191 282 1.5E-10 T 18-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 CH53_3659 8df25471aedce5823226268da970747b 509 Pfam PF00239 Resolvase, N terminal domain 4 163 6.3E-20 T 18-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CH53_3659 8df25471aedce5823226268da970747b 509 Gene3D G3DSA:3.40.50.1390 1 170 1.1E-27 T 18-10-2018 CH53_941 65fc3fa3ff5052190aa26e7a09cc2a06 66 Gene3D G3DSA:3.30.920.30 1 65 7.4E-17 T 18-10-2018 IPR038570 HicA superfamily CH53_941 65fc3fa3ff5052190aa26e7a09cc2a06 66 SUPERFAMILY SSF54786 1 64 2.08E-10 T 18-10-2018 CH53_941 65fc3fa3ff5052190aa26e7a09cc2a06 66 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 5 63 5.8E-11 T 18-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 CH53_1950 35c403793b0b53499f9b3fd829129d17 548 SUPERFAMILY SSF52518 1 178 3.84E-64 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_1950 35c403793b0b53499f9b3fd829129d17 548 SUPERFAMILY SSF52518 357 546 6.08E-64 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold CH53_1950 35c403793b0b53499f9b3fd829129d17 548 Gene3D G3DSA:3.40.50.970 344 522 1.7E-121 T 18-10-2018 CH53_1950 35c403793b0b53499f9b3fd829129d17 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 1.8E-48 T 18-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CH53_1950 35c403793b0b53499f9b3fd829129d17 548 Gene3D G3DSA:3.40.50.970 1 172 4.1E-69 T 18-10-2018 CH53_1950 35c403793b0b53499f9b3fd829129d17 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 1.4E-215 T 18-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CH53_1950 35c403793b0b53499f9b3fd829129d17 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 164 2.5E-57 T 18-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CH53_1950 35c403793b0b53499f9b3fd829129d17 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 18-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CH53_1950 35c403793b0b53499f9b3fd829129d17 548 SUPERFAMILY SSF52467 184 342 1.02E-58 T 18-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CH53_1950 35c403793b0b53499f9b3fd829129d17 548 Gene3D G3DSA:3.40.50.1220 186 343 1.7E-121 T 18-10-2018 CH53_1950 35c403793b0b53499f9b3fd829129d17 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 321 6.1E-44 T 18-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CH53_4115 3cbe16404c1fa846e86831ce8d7c6f57 508 SUPERFAMILY SSF101960 41 505 1.83E-134 T 18-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CH53_4115 3cbe16404c1fa846e86831ce8d7c6f57 508 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 20 499 1.9E-191 T 18-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 CH53_4115 3cbe16404c1fa846e86831ce8d7c6f57 508 Pfam PF01458 Uncharacterized protein family (UPF0051) 247 479 2.3E-67 T 18-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CH53_2514 d5378732d20d58421f5a378058ab2cc7 280 Gene3D G3DSA:3.30.420.40 143 255 6.6E-84 T 18-10-2018 CH53_2514 d5378732d20d58421f5a378058ab2cc7 280 SUPERFAMILY SSF53067 34 135 6.91E-10 T 18-10-2018 CH53_2514 d5378732d20d58421f5a378058ab2cc7 280 SUPERFAMILY SSF53067 141 272 7.5E-22 T 18-10-2018 CH53_2514 d5378732d20d58421f5a378058ab2cc7 280 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 36 269 5.8E-96 T 18-10-2018 IPR013366 Ethanolamine utilisation EutJ CH53_2514 d5378732d20d58421f5a378058ab2cc7 280 Gene3D G3DSA:3.30.420.40 33 268 6.6E-84 T 18-10-2018 CH53_2514 d5378732d20d58421f5a378058ab2cc7 280 Pfam PF14450 Cell division protein FtsA 143 210 2.5E-8 T 18-10-2018 CH53_3187 32a2b7d6bc277a3488ae56dd63e9b39d 236 PIRSF PIRSF006755 1 222 1.0E-81 T 18-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CH53_3187 32a2b7d6bc277a3488ae56dd63e9b39d 236 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 3.6E-60 T 18-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CH53_3187 32a2b7d6bc277a3488ae56dd63e9b39d 236 Gene3D G3DSA:3.40.50.300 2 227 1.6E-68 T 18-10-2018 CH53_3187 32a2b7d6bc277a3488ae56dd63e9b39d 236 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 211 29.133 T 18-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CH53_3187 32a2b7d6bc277a3488ae56dd63e9b39d 236 Pfam PF13500 AAA domain 5 211 1.8E-36 T 18-10-2018 CH53_3187 32a2b7d6bc277a3488ae56dd63e9b39d 236 SUPERFAMILY SSF52540 3 212 1.64E-62 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3318 7ef3dc654c1149e9c4da4f2adb840d83 109 SUPERFAMILY SSF51182 6 98 4.19E-10 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_3318 7ef3dc654c1149e9c4da4f2adb840d83 109 Gene3D G3DSA:2.60.120.10 4 99 1.2E-8 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_2051 91727d4ca2f5c55b4070bdc92f807685 299 SUPERFAMILY SSF103481 36 131 1.7E-7 T 18-10-2018 CH53_2051 91727d4ca2f5c55b4070bdc92f807685 299 SUPERFAMILY SSF103481 198 278 7.19E-9 T 18-10-2018 CH53_2051 91727d4ca2f5c55b4070bdc92f807685 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 2.3E-83 T 18-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 CH53_2051 91727d4ca2f5c55b4070bdc92f807685 299 Pfam PF00892 EamA-like transporter family 138 274 8.1E-12 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_2051 91727d4ca2f5c55b4070bdc92f807685 299 Pfam PF00892 EamA-like transporter family 1 129 1.1E-7 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_1914 7d0682d9d0798b22e770da271af31026 257 SUPERFAMILY SSF53633 2 256 1.05E-58 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CH53_1914 7d0682d9d0798b22e770da271af31026 257 Hamap MF_00082 Acetylglutamate kinase [argB]. 1 250 43.909 T 18-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CH53_1914 7d0682d9d0798b22e770da271af31026 257 PIRSF PIRSF000728 1 257 1.1E-70 T 18-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CH53_1914 7d0682d9d0798b22e770da271af31026 257 Pfam PF00696 Amino acid kinase family 4 234 4.9E-38 T 18-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CH53_1914 7d0682d9d0798b22e770da271af31026 257 Gene3D G3DSA:3.40.1160.10 1 256 1.6E-72 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CH53_1914 7d0682d9d0798b22e770da271af31026 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 233 1.7E-72 T 18-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CH53_640 5ca0da0b1be0844174b96879618c5ef7 66 SUPERFAMILY SSF140319 3 64 1.19E-26 T 18-10-2018 IPR036762 IscX-like superfamily CH53_640 5ca0da0b1be0844174b96879618c5ef7 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 1.6E-32 T 18-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CH53_640 5ca0da0b1be0844174b96879618c5ef7 66 Gene3D G3DSA:1.10.10.600 1 66 3.0E-31 T 18-10-2018 IPR036762 IscX-like superfamily CH53_640 5ca0da0b1be0844174b96879618c5ef7 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 5.1E-32 T 18-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CH53_640 5ca0da0b1be0844174b96879618c5ef7 66 PIRSF PIRSF039003 3 66 1.9E-32 T 18-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CH53_3026 a953ea433f099a56029840ed7076e7be 336 Pfam PF12146 Serine aminopeptidase, S33 60 289 2.4E-12 T 18-10-2018 IPR022742 Serine aminopeptidase, S33 CH53_3026 a953ea433f099a56029840ed7076e7be 336 Gene3D G3DSA:3.40.50.1820 28 294 2.0E-34 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_3026 a953ea433f099a56029840ed7076e7be 336 SUPERFAMILY SSF53474 32 295 1.19E-31 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_407 b193fe04c5dc03616e60affcdca20f0e 169 Pfam PF02674 Colicin V production protein 4 142 2.4E-36 T 18-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CH53_1649 58003f36264c2200e381f48e6d7c52a3 510 SMART SM00387 414 504 1.0E-7 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_1649 58003f36264c2200e381f48e6d7c52a3 510 Pfam PF07730 Histidine kinase 311 375 2.9E-10 T 18-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CH53_1649 58003f36264c2200e381f48e6d7c52a3 510 Pfam PF05231 MASE1 7 283 5.1E-19 T 18-10-2018 IPR007895 MASE1 CH53_1649 58003f36264c2200e381f48e6d7c52a3 510 SUPERFAMILY SSF55874 393 501 1.57E-15 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1649 58003f36264c2200e381f48e6d7c52a3 510 Gene3D G3DSA:3.30.565.10 388 503 2.3E-27 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CH53_1649 58003f36264c2200e381f48e6d7c52a3 510 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 417 501 1.8E-6 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CH53_1553 fcef11b3458a09d8405f342db9faa6ac 135 Gene3D G3DSA:3.10.290.10 3 110 1.4E-38 T 18-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CH53_1553 fcef11b3458a09d8405f342db9faa6ac 135 PIRSF PIRSF016821 8 135 5.9E-42 T 18-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 CH53_1553 fcef11b3458a09d8405f342db9faa6ac 135 SMART SM00363 11 76 3.9E-8 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1553 fcef11b3458a09d8405f342db9faa6ac 135 Pfam PF01479 S4 domain 11 57 1.3E-11 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1553 fcef11b3458a09d8405f342db9faa6ac 135 SUPERFAMILY SSF55174 10 106 1.41E-30 T 18-10-2018 CH53_1738 6c6c439c881bb70a3f6ed9f74abe8af2 272 Gene3D G3DSA:3.40.190.10 108 220 3.5E-67 T 18-10-2018 CH53_1738 6c6c439c881bb70a3f6ed9f74abe8af2 272 Gene3D G3DSA:3.40.190.10 43 259 3.5E-67 T 18-10-2018 CH53_1738 6c6c439c881bb70a3f6ed9f74abe8af2 272 Pfam PF03180 NLPA lipoprotein 29 268 6.4E-55 T 18-10-2018 IPR004872 Lipoprotein NlpA family CH53_1738 6c6c439c881bb70a3f6ed9f74abe8af2 272 SUPERFAMILY SSF53850 29 261 2.29E-48 T 18-10-2018 CH53_1377 f17532b5b9563f65477158384bca9f3e 387 Gene3D G3DSA:3.40.50.10350 2 360 4.4E-143 T 18-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold CH53_1377 f17532b5b9563f65477158384bca9f3e 387 Pfam PF02595 Glycerate kinase family 3 373 1.0E-148 T 18-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CH53_1377 f17532b5b9563f65477158384bca9f3e 387 PIRSF PIRSF006078 1 377 2.2E-139 T 18-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CH53_1377 f17532b5b9563f65477158384bca9f3e 387 SUPERFAMILY SSF110738 1 375 1.27E-141 T 18-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 CH53_1377 f17532b5b9563f65477158384bca9f3e 387 Gene3D G3DSA:3.90.1510.10 42 276 4.4E-143 T 18-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 CH53_1377 f17532b5b9563f65477158384bca9f3e 387 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 4.8E-165 T 18-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CH53_3977 7a1dd584191a009a81d68026d3f3d3c6 449 Gene3D G3DSA:3.20.20.70 93 350 2.3E-12 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3977 7a1dd584191a009a81d68026d3f3d3c6 449 Pfam PF02638 Glycosyl hydrolase-like 10 66 399 3.2E-117 T 18-10-2018 IPR003790 Glycosyl hydrolase-like 10 CH53_3977 7a1dd584191a009a81d68026d3f3d3c6 449 SUPERFAMILY SSF51445 92 368 5.22E-32 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_2549 ae68ed8033bbeebdbd0e7633e364aee7 500 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 69 494 5.1E-190 T 18-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH53_2549 ae68ed8033bbeebdbd0e7633e364aee7 500 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 20 494 1.7E-217 T 18-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH53_3412 41e4651884391fddbe4e5167276459c1 163 SUPERFAMILY SSF141452 2 161 2.75E-43 T 18-10-2018 IPR036624 Hcp1-like superfamily CH53_3412 41e4651884391fddbe4e5167276459c1 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 7.1E-36 T 18-10-2018 IPR008514 Type VI secretion system effector, Hcp CH53_3412 41e4651884391fddbe4e5167276459c1 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 7.5E-50 T 18-10-2018 IPR008514 Type VI secretion system effector, Hcp CH53_3412 41e4651884391fddbe4e5167276459c1 163 Gene3D G3DSA:2.30.110.20 1 163 1.2E-80 T 18-10-2018 IPR036624 Hcp1-like superfamily CH53_135 53bc71f6c7102f087bb85297aba71629 215 SUPERFAMILY SSF56281 2 209 3.41E-61 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_135 53bc71f6c7102f087bb85297aba71629 215 Gene3D G3DSA:3.60.15.10 1 210 4.9E-86 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_135 53bc71f6c7102f087bb85297aba71629 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 8.5E-33 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_135 53bc71f6c7102f087bb85297aba71629 215 SMART SM00849 12 192 5.0E-43 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_3423 188d22315b0447b151554d50d04da0d7 528 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 224 485 1.9E-83 T 18-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 CH53_3423 188d22315b0447b151554d50d04da0d7 528 Pfam PF06812 ImpA, N-terminal, type VI secretion system 34 138 1.5E-20 T 18-10-2018 IPR010657 ImpA, N-terminal CH53_3423 188d22315b0447b151554d50d04da0d7 528 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 29 485 9.7E-108 T 18-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 CH53_2610 93e569c16133d01bb243364365261955 247 Gene3D G3DSA:3.30.70.2970 46 153 2.0E-52 T 18-10-2018 CH53_2610 93e569c16133d01bb243364365261955 247 Pfam PF04402 Protein of unknown function (DUF541) 36 237 7.6E-45 T 18-10-2018 IPR007497 Protein of unknown function DUF541 CH53_2610 93e569c16133d01bb243364365261955 247 Gene3D G3DSA:3.30.110.170 37 238 2.0E-52 T 18-10-2018 CH53_197 7a60387b6b506a8ad4a608253acde46e 388 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 177 205 - T 18-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CH53_197 7a60387b6b506a8ad4a608253acde46e 388 SUPERFAMILY SSF56796 5 387 2.88E-114 T 18-10-2018 CH53_197 7a60387b6b506a8ad4a608253acde46e 388 Gene3D G3DSA:1.20.1090.10 189 387 2.2E-64 T 18-10-2018 CH53_197 7a60387b6b506a8ad4a608253acde46e 388 Pfam PF00465 Iron-containing alcohol dehydrogenase 18 379 6.1E-112 T 18-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CH53_197 7a60387b6b506a8ad4a608253acde46e 388 Gene3D G3DSA:3.40.50.1970 1 188 2.2E-49 T 18-10-2018 CH53_1123 9427d0ec95c864423644dd88b88e568b 204 Pfam PF04972 BON domain 58 124 5.4E-22 T 18-10-2018 IPR007055 BON domain CH53_1123 9427d0ec95c864423644dd88b88e568b 204 Pfam PF04972 BON domain 137 204 1.1E-18 T 18-10-2018 IPR007055 BON domain CH53_1123 9427d0ec95c864423644dd88b88e568b 204 SMART SM00749 141 204 1.3E-10 T 18-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria CH53_1123 9427d0ec95c864423644dd88b88e568b 204 SMART SM00749 62 125 9.0E-12 T 18-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria CH53_1442 66b1e7bf003eaa5bc3a64c4b4b240dd5 386 Gene3D G3DSA:3.40.50.1820 19 385 4.3E-86 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_1442 66b1e7bf003eaa5bc3a64c4b4b240dd5 386 SUPERFAMILY SSF53474 96 385 1.71E-35 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_1442 66b1e7bf003eaa5bc3a64c4b4b240dd5 386 Pfam PF12715 Abhydrolase family 48 341 2.0E-16 T 18-10-2018 IPR025890 Abhydrolase, bacterial CH53_2951 fe3ef3eb01f615ded1077d6d869e0408 380 Pfam PF05598 Transposase domain (DUF772) 56 119 2.2E-17 T 18-10-2018 IPR008490 Transposase InsH, N-terminal CH53_1544 aa87cfb971dcb376a1b50a443f692fa6 426 PRINTS PR01032 Gene IV protein signature 286 309 4.2E-9 T 18-10-2018 CH53_1544 aa87cfb971dcb376a1b50a443f692fa6 426 PRINTS PR01032 Gene IV protein signature 352 380 4.2E-9 T 18-10-2018 CH53_1544 aa87cfb971dcb376a1b50a443f692fa6 426 PRINTS PR01032 Gene IV protein signature 245 268 4.2E-9 T 18-10-2018 CH53_1544 aa87cfb971dcb376a1b50a443f692fa6 426 PRINTS PR01032 Gene IV protein signature 405 426 4.2E-9 T 18-10-2018 CH53_1544 aa87cfb971dcb376a1b50a443f692fa6 426 PRINTS PR00811 Bacterial general secretion pathway protein D signature 261 285 8.0E-14 T 18-10-2018 IPR001775 GspD/PilQ family CH53_1544 aa87cfb971dcb376a1b50a443f692fa6 426 PRINTS PR00811 Bacterial general secretion pathway protein D signature 412 426 8.0E-14 T 18-10-2018 IPR001775 GspD/PilQ family CH53_1544 aa87cfb971dcb376a1b50a443f692fa6 426 PRINTS PR00811 Bacterial general secretion pathway protein D signature 389 407 8.0E-14 T 18-10-2018 IPR001775 GspD/PilQ family CH53_1544 aa87cfb971dcb376a1b50a443f692fa6 426 Gene3D G3DSA:3.55.50.30 26 132 3.2E-26 T 18-10-2018 CH53_1544 aa87cfb971dcb376a1b50a443f692fa6 426 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 370 403 - T 18-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 CH53_1544 aa87cfb971dcb376a1b50a443f692fa6 426 Pfam PF03958 Bacterial type II/III secretion system short domain 134 195 3.0E-9 T 18-10-2018 IPR005644 NolW-like CH53_1544 aa87cfb971dcb376a1b50a443f692fa6 426 Gene3D G3DSA:3.30.1370.120 133 194 2.1E-7 T 18-10-2018 IPR038591 NolW-like superfamily CH53_1544 aa87cfb971dcb376a1b50a443f692fa6 426 Pfam PF00263 Bacterial type II and III secretion system protein 265 424 2.0E-47 T 18-10-2018 IPR004846 Type II/III secretion system GO:0009306 CH53_1544 aa87cfb971dcb376a1b50a443f692fa6 426 SMART SM00965 62 110 0.0026 T 18-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CH53_3475 c69333c86937442878088cc6e2e82c2a 83 SUPERFAMILY SSF81273 7 58 2.75E-6 T 18-10-2018 CH53_3475 c69333c86937442878088cc6e2e82c2a 83 Gene3D G3DSA:1.10.287.1050 1 82 3.5E-9 T 18-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 CH53_2819 b0f00f2b6e2767c2682e57831502b906 1227 Gene3D G3DSA:3.40.50.300 1 292 4.6E-45 T 18-10-2018 CH53_2819 b0f00f2b6e2767c2682e57831502b906 1227 Gene3D G3DSA:3.40.50.300 998 1223 6.4E-28 T 18-10-2018 CH53_2819 b0f00f2b6e2767c2682e57831502b906 1227 SUPERFAMILY SSF52540 27 1199 1.75E-25 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2819 b0f00f2b6e2767c2682e57831502b906 1227 Pfam PF13476 AAA domain 5 280 4.8E-24 T 18-10-2018 IPR038729 Rad50/SbcC-type AAA domain CH53_2819 b0f00f2b6e2767c2682e57831502b906 1227 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1110 1181 3.3E-15 T 18-10-2018 CH53_4401 3f538d95a920509c35678d7612f51792 148 Gene3D G3DSA:3.90.79.10 1 148 2.2E-44 T 18-10-2018 CH53_4401 3f538d95a920509c35678d7612f51792 148 PRINTS PR00502 NUDIX hydrolase family signature 45 60 2.7E-5 T 18-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CH53_4401 3f538d95a920509c35678d7612f51792 148 PRINTS PR00502 NUDIX hydrolase family signature 31 45 2.7E-5 T 18-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CH53_4401 3f538d95a920509c35678d7612f51792 148 Pfam PF00293 NUDIX domain 4 115 1.8E-16 T 18-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CH53_4401 3f538d95a920509c35678d7612f51792 148 SUPERFAMILY SSF55811 2 131 3.52E-30 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CH53_4401 3f538d95a920509c35678d7612f51792 148 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 18-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CH53_3278 4fd182a6c203d3274b8ee59e8ef06264 134 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 3 132 5.0E-39 T 18-10-2018 IPR010005 Formate hydrogenlyase maturation HycH CH53_3278 4fd182a6c203d3274b8ee59e8ef06264 134 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 4 132 3.4E-56 T 18-10-2018 IPR010005 Formate hydrogenlyase maturation HycH CH53_3081 2c7437299403599a0996b005825dce86 351 Pfam PF02562 PhoH-like protein 118 321 4.1E-94 T 18-10-2018 IPR003714 PhoH-like protein GO:0005524 CH53_3081 2c7437299403599a0996b005825dce86 351 SUPERFAMILY SSF52540 117 293 1.86E-40 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3081 2c7437299403599a0996b005825dce86 351 Gene3D G3DSA:3.40.50.300 115 321 8.5E-74 T 18-10-2018 CH53_2992 4fb2bf6411795ca590d85984d2ed5f10 426 Gene3D G3DSA:3.40.50.1110 149 423 2.6E-37 T 18-10-2018 IPR036514 SGNH hydrolase superfamily CH53_2992 4fb2bf6411795ca590d85984d2ed5f10 426 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 160 416 1.9E-11 T 18-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 CH53_2992 4fb2bf6411795ca590d85984d2ed5f10 426 SUPERFAMILY SSF52266 158 423 3.3E-11 T 18-10-2018 CH53_2181 c690903f511dc018b120423e1d744448 545 SUPERFAMILY SSF53067 280 532 4.14E-54 T 18-10-2018 CH53_2181 c690903f511dc018b120423e1d744448 545 PIRSF PIRSF000538 2 543 4.5E-75 T 18-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_2181 c690903f511dc018b120423e1d744448 545 Gene3D G3DSA:3.30.420.40 5 513 4.2E-225 T 18-10-2018 CH53_2181 c690903f511dc018b120423e1d744448 545 SUPERFAMILY SSF53067 4 263 5.57E-60 T 18-10-2018 CH53_2181 c690903f511dc018b120423e1d744448 545 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 262 1.2E-30 T 18-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CH53_2181 c690903f511dc018b120423e1d744448 545 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 282 489 5.1E-40 T 18-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CH53_2181 c690903f511dc018b120423e1d744448 545 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 5 537 4.5E-210 T 18-10-2018 IPR006003 FGGY carbohydrate kinase, pentulose kinase GO:0005975|GO:0016773 CH53_2181 c690903f511dc018b120423e1d744448 545 Gene3D G3DSA:3.30.420.460 323 525 4.2E-225 T 18-10-2018 CH53_860 a3d09e7c5a16be9a7810feea77e461f1 244 Pfam PF00005 ABC transporter 26 171 5.0E-27 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_860 a3d09e7c5a16be9a7810feea77e461f1 244 Gene3D G3DSA:3.40.50.300 5 243 6.2E-56 T 18-10-2018 CH53_860 a3d09e7c5a16be9a7810feea77e461f1 244 SUPERFAMILY SSF52540 8 240 4.61E-58 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3532 62702f7aa5330747691ea3ef12458750 116 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 4.0E-40 T 18-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CH53_3532 62702f7aa5330747691ea3ef12458750 116 SUPERFAMILY SSF63592 1 98 2.62E-39 T 18-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily CH53_3532 62702f7aa5330747691ea3ef12458750 116 Gene3D G3DSA:1.10.4000.10 1 116 7.8E-48 T 18-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily CH53_3532 62702f7aa5330747691ea3ef12458750 116 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 94 7.0E-45 T 18-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CH53_3532 62702f7aa5330747691ea3ef12458750 116 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 28.824 T 18-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CH53_887 cc635bbc95468f8256cdc3bcb516f2b7 416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 259 373 1.4E-32 T 18-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CH53_887 cc635bbc95468f8256cdc3bcb516f2b7 416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 159 175 - T 18-10-2018 IPR018201 Beta-ketoacyl synthase, active site CH53_887 cc635bbc95468f8256cdc3bcb516f2b7 416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 8 249 1.8E-28 T 18-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CH53_887 cc635bbc95468f8256cdc3bcb516f2b7 416 SUPERFAMILY SSF53901 220 413 4.8E-61 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_887 cc635bbc95468f8256cdc3bcb516f2b7 416 SUPERFAMILY SSF53901 8 258 6.37E-43 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_887 cc635bbc95468f8256cdc3bcb516f2b7 416 SMART SM00825 Beta-ketoacyl synthase 89 414 1.8E-7 T 18-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH53_887 cc635bbc95468f8256cdc3bcb516f2b7 416 Gene3D G3DSA:3.40.47.10 263 415 2.0E-45 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_887 cc635bbc95468f8256cdc3bcb516f2b7 416 Gene3D G3DSA:3.40.47.10 1 260 7.5E-49 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_1203 d52cb34b40211e07aecc2759de72b70a 178 Gene3D G3DSA:2.60.40.1090 31 178 3.1E-28 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_1203 d52cb34b40211e07aecc2759de72b70a 178 Pfam PF00419 Fimbrial protein 32 178 9.4E-14 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_1203 d52cb34b40211e07aecc2759de72b70a 178 SUPERFAMILY SSF49401 32 178 1.24E-26 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_3690 1f956c896c630f454b466caf12e963a1 239 SUPERFAMILY SSF52172 1 141 1.24E-31 T 18-10-2018 IPR011006 CheY-like superfamily CH53_3690 1f956c896c630f454b466caf12e963a1 239 SMART SM00448 2 117 1.3E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3690 1f956c896c630f454b466caf12e963a1 239 PIRSF PIRSF006171 1 230 1.1E-79 T 18-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 CH53_3690 1f956c896c630f454b466caf12e963a1 239 Gene3D G3DSA:3.40.50.12740 2 204 3.4E-27 T 18-10-2018 CH53_3690 1f956c896c630f454b466caf12e963a1 239 Pfam PF00072 Response regulator receiver domain 4 117 9.6E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3480 2589ce72755558ce27d7c8f58b50925d 215 Gene3D G3DSA:1.10.10.10 58 154 7.6E-7 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2545 36601a03d2333db86d9c4ad87fa8071a 249 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 144 5.8E-44 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_2545 36601a03d2333db86d9c4ad87fa8071a 249 SUPERFAMILY SSF49354 19 144 2.38E-41 T 18-10-2018 IPR008962 PapD-like superfamily CH53_2545 36601a03d2333db86d9c4ad87fa8071a 249 SUPERFAMILY SSF49584 138 234 1.1E-17 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_2545 36601a03d2333db86d9c4ad87fa8071a 249 Gene3D G3DSA:2.60.40.10 24 145 4.8E-44 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2545 36601a03d2333db86d9c4ad87fa8071a 249 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 99 116 - T 18-10-2018 IPR018046 Pili assembly chaperone, conserved site CH53_2545 36601a03d2333db86d9c4ad87fa8071a 249 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 171 231 9.7E-16 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_2545 36601a03d2333db86d9c4ad87fa8071a 249 Gene3D G3DSA:2.60.40.10 147 241 2.2E-22 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_2545 36601a03d2333db86d9c4ad87fa8071a 249 PRINTS PR00969 Pili chaperone signature 126 141 1.7E-33 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2545 36601a03d2333db86d9c4ad87fa8071a 249 PRINTS PR00969 Pili chaperone signature 72 93 1.7E-33 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2545 36601a03d2333db86d9c4ad87fa8071a 249 PRINTS PR00969 Pili chaperone signature 23 32 1.7E-33 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2545 36601a03d2333db86d9c4ad87fa8071a 249 PRINTS PR00969 Pili chaperone signature 166 181 1.7E-33 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_2545 36601a03d2333db86d9c4ad87fa8071a 249 PRINTS PR00969 Pili chaperone signature 100 117 1.7E-33 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_798 cddf612daae34dd9dfe0d8d2d61f67af 120 Gene3D G3DSA:3.30.160.100 1 107 3.6E-36 T 18-10-2018 IPR036567 Ribosome hibernation promotion factor-like CH53_798 cddf612daae34dd9dfe0d8d2d61f67af 120 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 2.9E-32 T 18-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CH53_798 cddf612daae34dd9dfe0d8d2d61f67af 120 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 1.7E-21 T 18-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CH53_798 cddf612daae34dd9dfe0d8d2d61f67af 120 SUPERFAMILY SSF69754 3 105 1.09E-31 T 18-10-2018 IPR036567 Ribosome hibernation promotion factor-like CH53_381 2df207d132bf2e6dc2b11adf3f1bac31 225 SUPERFAMILY SSF56770 43 190 5.1E-64 T 18-10-2018 CH53_381 2df207d132bf2e6dc2b11adf3f1bac31 225 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 28 182 41.895 T 18-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_381 2df207d132bf2e6dc2b11adf3f1bac31 225 Gene3D G3DSA:3.40.50.12280 26 193 6.5E-70 T 18-10-2018 CH53_381 2df207d132bf2e6dc2b11adf3f1bac31 225 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 69 175 5.2E-22 T 18-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_381 2df207d132bf2e6dc2b11adf3f1bac31 225 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 149 165 - T 18-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_381 2df207d132bf2e6dc2b11adf3f1bac31 225 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 46 183 9.4E-69 T 18-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_465 f10f2ba09ba83958280e90144b6c9e10 482 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_465 f10f2ba09ba83958280e90144b6c9e10 482 Pfam PF02378 Phosphotransferase system, EIIC 114 397 1.3E-39 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_465 f10f2ba09ba83958280e90144b6c9e10 482 Gene3D G3DSA:3.30.1360.60 1 79 7.3E-25 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_465 f10f2ba09ba83958280e90144b6c9e10 482 SUPERFAMILY SSF55604 10 82 3.27E-22 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_465 f10f2ba09ba83958280e90144b6c9e10 482 Pfam PF00367 phosphotransferase system, EIIB 11 43 1.8E-15 T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_3932 7229d60e5268e0dd03f287d3d3035083 351 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 6 346 2.8E-139 T 18-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 CH53_3932 7229d60e5268e0dd03f287d3d3035083 351 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 1 347 28.201 T 18-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 CH53_3932 7229d60e5268e0dd03f287d3d3035083 351 Pfam PF03116 NQR2, RnfD, RnfE family 3 345 1.0E-108 T 18-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 CH53_2331 cea187bc764c9c0e625887630d38e66f 272 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 264 5.5E-99 T 18-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CH53_2331 cea187bc764c9c0e625887630d38e66f 272 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 271 18.371 T 18-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CH53_2331 cea187bc764c9c0e625887630d38e66f 272 Pfam PF02673 Bacitracin resistance protein BacA 10 265 1.4E-85 T 18-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CH53_797 caafed9cf476ae945441d8eeec5b73b4 243 Pfam PF13525 Outer membrane lipoprotein 28 236 3.3E-85 T 18-10-2018 IPR039565 Outer membrane lipoprotein BamD-like CH53_797 caafed9cf476ae945441d8eeec5b73b4 243 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 241 5.0E-90 T 18-10-2018 IPR017689 Outer membrane protein assembly factor BamD CH53_797 caafed9cf476ae945441d8eeec5b73b4 243 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 242 39.109 T 18-10-2018 IPR017689 Outer membrane protein assembly factor BamD CH53_797 caafed9cf476ae945441d8eeec5b73b4 243 Gene3D G3DSA:1.25.40.10 29 243 2.9E-63 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_797 caafed9cf476ae945441d8eeec5b73b4 243 SUPERFAMILY SSF48452 27 119 1.0E-8 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_1991 fcab908ccf810ca710378fda1e1637b5 249 SUPERFAMILY SSF69618 1 248 3.14E-56 T 18-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CH53_1991 fcab908ccf810ca710378fda1e1637b5 249 Gene3D G3DSA:3.40.50.10090 32 165 2.4E-69 T 18-10-2018 CH53_1991 fcab908ccf810ca710378fda1e1637b5 249 Gene3D G3DSA:3.40.50.10090 4 245 2.4E-69 T 18-10-2018 CH53_1991 fcab908ccf810ca710378fda1e1637b5 249 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 1.9E-43 T 18-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CH53_667 c848b26b381063c06106471c7d0b836a 146 Gene3D G3DSA:2.60.40.2550 43 137 2.2E-5 T 18-10-2018 CH53_329 fba4ce05e336c1fbdd97706157464ea2 430 SUPERFAMILY SSF51126 8 416 7.43E-77 T 18-10-2018 IPR011050 Pectin lyase fold/virulence factor CH53_329 fba4ce05e336c1fbdd97706157464ea2 430 SMART SM00710 179 204 190.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_329 fba4ce05e336c1fbdd97706157464ea2 430 SMART SM00710 265 286 56.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_329 fba4ce05e336c1fbdd97706157464ea2 430 SMART SM00710 239 259 3900.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_329 fba4ce05e336c1fbdd97706157464ea2 430 SMART SM00710 205 226 380.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_329 fba4ce05e336c1fbdd97706157464ea2 430 Pfam PF00295 Glycosyl hydrolases family 28 92 317 8.5E-26 T 18-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 CH53_329 fba4ce05e336c1fbdd97706157464ea2 430 Gene3D G3DSA:2.160.20.10 2 428 1.8E-108 T 18-10-2018 IPR012334 Pectin lyase fold CH53_2248 2faae14737b61fb9581c5cd687634ca8 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 13 184 3.4E-55 T 18-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related CH53_2248 2faae14737b61fb9581c5cd687634ca8 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 186 27.741 T 18-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CH53_2248 2faae14737b61fb9581c5cd687634ca8 187 Gene3D G3DSA:2.60.450.10 60 187 2.6E-50 T 18-10-2018 CH53_2248 2faae14737b61fb9581c5cd687634ca8 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 7 183 1.4E-55 T 18-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CH53_2248 2faae14737b61fb9581c5cd687634ca8 187 PIRSF PIRSF028513 1 187 1.0E-41 T 18-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CH53_567 edb08c9a856f6a726f2c678a4b2f27b7 65 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 61 7.1E-37 T 18-10-2018 IPR020910 Uncharacterised protein family UPF0370 CH53_567 edb08c9a856f6a726f2c678a4b2f27b7 65 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 62 28.158 T 18-10-2018 IPR020910 Uncharacterised protein family UPF0370 CH53_4104 daeabda077226590b972bf06d7055a39 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 50.749 T 18-10-2018 IPR022913 Multidrug resistance protein MdtK CH53_4104 daeabda077226590b972bf06d7055a39 457 PIRSF PIRSF006603 5 451 3.4E-59 T 18-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CH53_4104 daeabda077226590b972bf06d7055a39 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 2.1E-118 T 18-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CH53_4104 daeabda077226590b972bf06d7055a39 457 Pfam PF01554 MatE 17 177 3.0E-38 T 18-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CH53_4104 daeabda077226590b972bf06d7055a39 457 Pfam PF01554 MatE 244 405 2.6E-36 T 18-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CH53_778 ec07bacf37d35b3a7520f34084a4ae79 142 Pfam PF13279 Thioesterase-like superfamily 19 127 7.4E-14 T 18-10-2018 CH53_778 ec07bacf37d35b3a7520f34084a4ae79 142 SUPERFAMILY SSF54637 10 137 9.89E-31 T 18-10-2018 IPR029069 HotDog domain superfamily CH53_778 ec07bacf37d35b3a7520f34084a4ae79 142 Gene3D G3DSA:3.10.129.10 5 139 1.3E-28 T 18-10-2018 CH53_778 ec07bacf37d35b3a7520f34084a4ae79 142 PIRSF PIRSF003230 5 137 4.8E-21 T 18-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CH53_896 a29cc2abac1d52236203fa3f39e946b8 183 SUPERFAMILY SSF49401 33 182 4.08E-32 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_896 a29cc2abac1d52236203fa3f39e946b8 183 Gene3D G3DSA:2.60.40.1090 32 182 9.3E-29 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_896 a29cc2abac1d52236203fa3f39e946b8 183 Pfam PF00419 Fimbrial protein 36 182 2.8E-12 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_3964 50ebab9aa11e7772edda238342ef932e 129 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 67 3.3E-6 T 18-10-2018 IPR027379 Cardiolipin synthase N-terminal CH53_2190 d3d76b3da86bd8baa1e07c0af8442512 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 3.9E-100 T 18-10-2018 CH53_2190 d3d76b3da86bd8baa1e07c0af8442512 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.31 T 18-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CH53_2190 d3d76b3da86bd8baa1e07c0af8442512 293 PIRSF PIRSF000401 1 293 6.9E-90 T 18-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CH53_2190 d3d76b3da86bd8baa1e07c0af8442512 293 Gene3D G3DSA:3.40.50.150 101 293 1.1E-55 T 18-10-2018 CH53_2190 d3d76b3da86bd8baa1e07c0af8442512 293 SUPERFAMILY SSF53335 43 288 2.2E-43 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_2190 d3d76b3da86bd8baa1e07c0af8442512 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 7.0E-116 T 18-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CH53_935 b56cb0e60acae1340861c46ce0a8e4a1 105 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 1 105 2.0E-40 T 18-10-2018 IPR022721 Protein of unknown function DUF3561 CH53_935 b56cb0e60acae1340861c46ce0a8e4a1 105 Pfam PF12084 Protein of unknown function (DUF3561) 1 104 2.5E-46 T 18-10-2018 IPR022721 Protein of unknown function DUF3561 CH53_1981 ab34eee9de12351b553220a84ed78616 361 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 357 5.4E-181 T 18-10-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 CH53_1981 ab34eee9de12351b553220a84ed78616 361 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 361 68.354 T 18-10-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 CH53_1757 3c4459dd455a1eb93f54764cce4b885b 537 SMART SM00306 358 452 6.3E-6 T 18-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CH53_1757 3c4459dd455a1eb93f54764cce4b885b 537 SUPERFAMILY SSF51294 358 509 1.96E-25 T 18-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CH53_1757 3c4459dd455a1eb93f54764cce4b885b 537 Gene3D G3DSA:2.170.16.10 352 517 1.5E-12 T 18-10-2018 CH53_1757 3c4459dd455a1eb93f54764cce4b885b 537 Pfam PF05203 Hom_end-associated Hint 360 408 2.1E-8 T 18-10-2018 IPR007868 Hom-end-associated Hint GO:0030908 CH53_3912 f5ef4a3538a67b3b06d50ed709f56918 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 2.7E-91 T 18-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CH53_3912 f5ef4a3538a67b3b06d50ed709f56918 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 47.605 T 18-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CH53_3912 f5ef4a3538a67b3b06d50ed709f56918 196 Pfam PF00925 GTP cyclohydrolase II 5 170 1.0E-66 T 18-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CH53_3912 f5ef4a3538a67b3b06d50ed709f56918 196 Gene3D G3DSA:3.40.50.10990 1 174 1.1E-75 T 18-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CH53_3912 f5ef4a3538a67b3b06d50ed709f56918 196 SUPERFAMILY SSF142695 3 173 5.36E-66 T 18-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CH53_2977 1a196a01603c84943cd19c03636786fa 157 TIGRFAM TIGR00608 radc: DNA repair protein RadC 29 155 1.8E-43 T 18-10-2018 IPR001405 Uncharacterised protein family UPF0758 CH53_2977 1a196a01603c84943cd19c03636786fa 157 SUPERFAMILY SSF102712 84 122 3.92E-5 T 18-10-2018 CH53_2977 1a196a01603c84943cd19c03636786fa 157 Gene3D G3DSA:3.40.140.10 32 155 3.7E-40 T 18-10-2018 CH53_2977 1a196a01603c84943cd19c03636786fa 157 Pfam PF04002 RadC-like JAB domain 34 153 2.9E-42 T 18-10-2018 IPR025657 RadC-like JAB domain CH53_1402 db79ec8cbfda70dcc06d107535a4cfbe 481 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 8.3E-14 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1402 db79ec8cbfda70dcc06d107535a4cfbe 481 Gene3D G3DSA:3.40.640.10 141 360 6.3E-99 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_1402 db79ec8cbfda70dcc06d107535a4cfbe 481 SUPERFAMILY SSF53383 88 465 1.38E-92 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_1402 db79ec8cbfda70dcc06d107535a4cfbe 481 Gene3D G3DSA:3.90.1150.10 103 465 6.3E-99 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_1402 db79ec8cbfda70dcc06d107535a4cfbe 481 SMART SM00345 7 66 6.9E-18 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CH53_1402 db79ec8cbfda70dcc06d107535a4cfbe 481 Pfam PF00155 Aminotransferase class I and II 106 459 1.4E-35 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_1402 db79ec8cbfda70dcc06d107535a4cfbe 481 Gene3D G3DSA:1.10.10.10 1 67 2.2E-19 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_1402 db79ec8cbfda70dcc06d107535a4cfbe 481 SUPERFAMILY SSF46785 1 75 1.09E-17 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2511 7e2d226083cdfb86f6f9ea832ed23a15 97 SUPERFAMILY SSF143414 1 90 3.01E-31 T 18-10-2018 IPR037233 CcmK-like superfamily CH53_2511 7e2d226083cdfb86f6f9ea832ed23a15 97 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 48 3.0E-17 T 18-10-2018 CH53_2511 7e2d226083cdfb86f6f9ea832ed23a15 97 Gene3D G3DSA:3.30.70.1710 1 95 6.5E-39 T 18-10-2018 CH53_2511 7e2d226083cdfb86f6f9ea832ed23a15 97 Pfam PF00936 BMC domain 3 78 4.9E-27 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_2511 7e2d226083cdfb86f6f9ea832ed23a15 97 SMART SM00877 2 78 5.4E-35 T 18-10-2018 IPR000249 Microcompartment protein, bacteria CH53_2511 7e2d226083cdfb86f6f9ea832ed23a15 97 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 20 39 - T 18-10-2018 IPR020808 Bacterial microcompartments protein, conserved site CH53_1871 dd1d54d35c0be9655a1f2b201ec16df2 456 Gene3D G3DSA:2.70.70.10 316 456 3.7E-39 T 18-10-2018 IPR011055 Duplicated hybrid motif CH53_1871 dd1d54d35c0be9655a1f2b201ec16df2 456 Pfam PF01551 Peptidase family M23 357 450 5.1E-26 T 18-10-2018 IPR016047 Peptidase M23 CH53_1871 dd1d54d35c0be9655a1f2b201ec16df2 456 SUPERFAMILY SSF51261 282 454 8.89E-47 T 18-10-2018 IPR011055 Duplicated hybrid motif CH53_2155 077b7117d49721f194cb506198a59b49 72 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 3.4E-27 T 18-10-2018 IPR014318 Phage shock protein, PspG CH53_2155 077b7117d49721f194cb506198a59b49 72 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 3 65 1.8E-28 T 18-10-2018 IPR014318 Phage shock protein, PspG CH53_3307 dc3e76723998ca66a1693978f23261ac 471 Gene3D G3DSA:2.60.120.10 349 457 1.1E-20 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_3307 dc3e76723998ca66a1693978f23261ac 471 Pfam PF01050 Mannose-6-phosphate isomerase 316 466 1.1E-67 T 18-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 CH53_3307 dc3e76723998ca66a1693978f23261ac 471 SUPERFAMILY SSF53448 2 282 6.53E-76 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_3307 dc3e76723998ca66a1693978f23261ac 471 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 470 5.1E-230 T 18-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 CH53_3307 dc3e76723998ca66a1693978f23261ac 471 Gene3D G3DSA:3.90.550.10 2 348 3.9E-126 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_3307 dc3e76723998ca66a1693978f23261ac 471 SUPERFAMILY SSF51182 186 470 2.61E-89 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_3307 dc3e76723998ca66a1693978f23261ac 471 Pfam PF00483 Nucleotidyl transferase 4 287 8.0E-76 T 18-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CH53_3738 3279d064b3a3355b76816a749347dbe3 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 237 249 4.1E-14 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_3738 3279d064b3a3355b76816a749347dbe3 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 4.1E-14 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_3738 3279d064b3a3355b76816a749347dbe3 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 51 62 4.1E-14 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_3738 3279d064b3a3355b76816a749347dbe3 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 4.1E-14 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_3738 3279d064b3a3355b76816a749347dbe3 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 315 332 4.1E-14 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_3738 3279d064b3a3355b76816a749347dbe3 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 6.4E-54 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_3738 3279d064b3a3355b76816a749347dbe3 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 6.4E-54 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_3738 3279d064b3a3355b76816a749347dbe3 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 243 260 6.4E-54 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_3738 3279d064b3a3355b76816a749347dbe3 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 271 290 6.4E-54 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_3738 3279d064b3a3355b76816a749347dbe3 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 6.4E-54 T 18-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CH53_3738 3279d064b3a3355b76816a749347dbe3 361 Pfam PF00267 Gram-negative porin 28 361 8.7E-130 T 18-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CH53_3738 3279d064b3a3355b76816a749347dbe3 361 SUPERFAMILY SSF56935 23 361 7.59E-72 T 18-10-2018 CH53_3738 3279d064b3a3355b76816a749347dbe3 361 Gene3D G3DSA:2.40.160.10 23 361 2.8E-135 T 18-10-2018 IPR023614 Porin domain superfamily CH53_3439 8c987e9811b9800c523cf34a5080bebe 692 SUPERFAMILY SSF161098 140 405 3.27E-43 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3439 8c987e9811b9800c523cf34a5080bebe 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 501 677 1.5E-11 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_3439 8c987e9811b9800c523cf34a5080bebe 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 209 400 2.8E-16 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_3439 8c987e9811b9800c523cf34a5080bebe 692 Gene3D G3DSA:1.10.3720.10 139 410 3.1E-51 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3439 8c987e9811b9800c523cf34a5080bebe 692 Gene3D G3DSA:1.10.3720.10 430 688 1.6E-44 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3439 8c987e9811b9800c523cf34a5080bebe 692 SUPERFAMILY SSF161098 434 674 3.27E-43 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2138 699549104afcfedb7a93d2721262e6ff 445 SUPERFAMILY SSF55021 292 353 8.81E-15 T 18-10-2018 CH53_2138 699549104afcfedb7a93d2721262e6ff 445 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 444 2.3E-138 T 18-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CH53_2138 699549104afcfedb7a93d2721262e6ff 445 PIRSF PIRSF000726 1 445 6.2E-148 T 18-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CH53_2138 699549104afcfedb7a93d2721262e6ff 445 Gene3D G3DSA:3.40.1160.10 2 285 2.6E-98 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CH53_2138 699549104afcfedb7a93d2721262e6ff 445 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 1 444 1.0E-128 T 18-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CH53_2138 699549104afcfedb7a93d2721262e6ff 445 ProSitePatterns PS00324 Aspartokinase signature. 2 10 - T 18-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CH53_2138 699549104afcfedb7a93d2721262e6ff 445 Gene3D G3DSA:1.20.120.1320 38 130 2.6E-98 T 18-10-2018 CH53_2138 699549104afcfedb7a93d2721262e6ff 445 Gene3D G3DSA:3.30.70.260 299 443 9.7E-50 T 18-10-2018 CH53_2138 699549104afcfedb7a93d2721262e6ff 445 Pfam PF00696 Amino acid kinase family 1 273 9.9E-45 T 18-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CH53_2138 699549104afcfedb7a93d2721262e6ff 445 Gene3D G3DSA:3.30.70.260 305 379 9.7E-50 T 18-10-2018 CH53_2138 699549104afcfedb7a93d2721262e6ff 445 SUPERFAMILY SSF55021 373 444 5.38E-15 T 18-10-2018 CH53_2138 699549104afcfedb7a93d2721262e6ff 445 SUPERFAMILY SSF53633 1 288 2.88E-71 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CH53_3703 e28124ba7c9ff0ad437e34ed025139c4 397 Pfam PF16966 Porin-like glycoporin RafY 32 397 6.5E-182 T 18-10-2018 IPR016963 Glycoporin RafY CH53_3703 e28124ba7c9ff0ad437e34ed025139c4 397 SUPERFAMILY SSF56935 26 397 1.92E-9 T 18-10-2018 CH53_2738 50dc6a6e3c27a344d92b9b80f2de80ef 132 SUPERFAMILY SSF54593 4 129 1.02E-32 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_2738 50dc6a6e3c27a344d92b9b80f2de80ef 132 Gene3D G3DSA:3.10.180.10 9 128 3.3E-32 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_2738 50dc6a6e3c27a344d92b9b80f2de80ef 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 2.7E-21 T 18-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CH53_2983 8998dae5f1528fcbb78975463d0d4be7 112 Gene3D G3DSA:1.10.150.130 1 112 6.9E-6 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal CH53_2256 c138ef3309ed1625027f2d73446ccb33 106 Pfam PF13466 STAS domain 14 97 6.5E-15 T 18-10-2018 IPR002645 STAS domain CH53_2256 c138ef3309ed1625027f2d73446ccb33 106 SUPERFAMILY SSF52091 4 102 1.75E-14 T 18-10-2018 IPR036513 STAS domain superfamily CH53_2256 c138ef3309ed1625027f2d73446ccb33 106 Gene3D G3DSA:3.30.750.24 6 106 9.3E-10 T 18-10-2018 IPR036513 STAS domain superfamily CH53_2306 88ff62edd20ab6f424edbeb289c6134b 167 Pfam PF01863 Protein of unknown function DUF45 56 149 8.7E-11 T 18-10-2018 IPR002725 Protein of unknown function DUF45 CH53_2306 88ff62edd20ab6f424edbeb289c6134b 167 Gene3D G3DSA:3.30.2010.10 56 161 2.8E-7 T 18-10-2018 CH53_371 ef91804989371eb2f0d56ef6fed50469 507 Pfam PF00361 Proton-conducting membrane transporter 134 430 2.6E-70 T 18-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_371 ef91804989371eb2f0d56ef6fed50469 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 1.5E-36 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_371 ef91804989371eb2f0d56ef6fed50469 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 1.5E-36 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_371 ef91804989371eb2f0d56ef6fed50469 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 1.5E-36 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_371 ef91804989371eb2f0d56ef6fed50469 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 1.5E-36 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_371 ef91804989371eb2f0d56ef6fed50469 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 1.5E-36 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_371 ef91804989371eb2f0d56ef6fed50469 507 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 496 4.3E-182 T 18-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_2615 0a5eb3c326c082716ff5c4c1cd089a4b 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 33.686 T 18-10-2018 IPR023771 Cell division protein ZapA, eubacteria CH53_2615 0a5eb3c326c082716ff5c4c1cd089a4b 109 Gene3D G3DSA:1.10.20.30 1 47 5.0E-26 T 18-10-2018 CH53_2615 0a5eb3c326c082716ff5c4c1cd089a4b 109 Pfam PF05164 Cell division protein ZapA 6 90 2.6E-19 T 18-10-2018 IPR007838 Cell division protein ZapA-like CH53_2615 0a5eb3c326c082716ff5c4c1cd089a4b 109 Gene3D G3DSA:1.20.5.50 48 102 4.1E-6 T 18-10-2018 CH53_2615 0a5eb3c326c082716ff5c4c1cd089a4b 109 SUPERFAMILY SSF102829 6 94 4.97E-25 T 18-10-2018 IPR036192 Cell division protein ZapA-like superfamily CH53_1449 049de572ff223c8d27e8aebef1360357 273 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 191 1.5E-10 T 18-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CH53_1449 049de572ff223c8d27e8aebef1360357 273 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 271 4.2E-96 T 18-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CH53_1449 049de572ff223c8d27e8aebef1360357 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 3.5E-24 T 18-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CH53_1449 049de572ff223c8d27e8aebef1360357 273 Gene3D G3DSA:3.40.50.720 103 245 1.0E-84 T 18-10-2018 CH53_1449 049de572ff223c8d27e8aebef1360357 273 Gene3D G3DSA:3.40.50.10860 6 255 1.0E-84 T 18-10-2018 CH53_1449 049de572ff223c8d27e8aebef1360357 273 SUPERFAMILY SSF53223 4 102 2.82E-30 T 18-10-2018 CH53_1449 049de572ff223c8d27e8aebef1360357 273 SUPERFAMILY SSF51735 103 269 3.43E-42 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1449 049de572ff223c8d27e8aebef1360357 273 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 270 32.769 T 18-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CH53_3440 7b85cc4d5293dffec194cd8db21fad7a 343 Gene3D G3DSA:3.40.190.10 31 306 4.7E-118 T 18-10-2018 CH53_3440 7b85cc4d5293dffec194cd8db21fad7a 343 Gene3D G3DSA:3.40.190.10 133 320 4.7E-118 T 18-10-2018 CH53_3440 7b85cc4d5293dffec194cd8db21fad7a 343 SUPERFAMILY SSF53850 24 328 3.06E-70 T 18-10-2018 CH53_3440 7b85cc4d5293dffec194cd8db21fad7a 343 Pfam PF13343 Bacterial extracellular solute-binding protein 75 284 6.3E-32 T 18-10-2018 CH53_3440 7b85cc4d5293dffec194cd8db21fad7a 343 PIRSF PIRSF002825 1 340 3.1E-68 T 18-10-2018 IPR026045 Ferric binding protein CH53_1426 2d961bcb44806e12fa23aa319f02e63f 136 Pfam PF09621 Type III secretion system regulator (LcrR) 10 69 3.2E-6 T 18-10-2018 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 CH53_2676 a8af694579df1254b93d79709d3926fd 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 18-10-2018 CH53_2676 a8af694579df1254b93d79709d3926fd 338 SMART SM00354 1 71 3.2E-35 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_2676 a8af694579df1254b93d79709d3926fd 338 Gene3D G3DSA:3.40.50.2300 61 305 5.4E-72 T 18-10-2018 CH53_2676 a8af694579df1254b93d79709d3926fd 338 Gene3D G3DSA:1.10.260.40 3 59 1.8E-22 T 18-10-2018 CH53_2676 a8af694579df1254b93d79709d3926fd 338 Gene3D G3DSA:3.40.50.2300 160 289 5.4E-72 T 18-10-2018 CH53_2676 a8af694579df1254b93d79709d3926fd 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-7 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_2676 a8af694579df1254b93d79709d3926fd 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-7 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_2676 a8af694579df1254b93d79709d3926fd 338 SUPERFAMILY SSF47413 1 59 4.17E-17 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_2676 a8af694579df1254b93d79709d3926fd 338 SUPERFAMILY SSF53822 60 333 1.22E-85 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_2676 a8af694579df1254b93d79709d3926fd 338 Pfam PF13377 Periplasmic binding protein-like domain 168 329 4.9E-33 T 18-10-2018 CH53_2676 a8af694579df1254b93d79709d3926fd 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-20 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_1363 6e1e1f5a4d08afb52c5057cf13f2543b 114 Pfam PF13698 Domain of unknown function (DUF4156) 22 113 9.6E-32 T 18-10-2018 IPR025294 Protein of unknown function DUF4156 CH53_2060 38d4900a5cf52523fb9a662944e87fcf 202 SUPERFAMILY SSF55718 18 117 1.44E-7 T 18-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CH53_2060 38d4900a5cf52523fb9a662944e87fcf 202 Pfam PF02036 SCP-2 sterol transfer family 15 113 6.8E-20 T 18-10-2018 IPR003033 SCP2 sterol-binding domain CH53_2455 63046867df9f8212cb31a0ce5b47bed4 161 Pfam PF15941 FidL-like putative membrane protein 71 156 4.7E-10 T 18-10-2018 IPR031854 Putative membrane protein FidL-like CH53_3182 3322010a45aa63f4c888cf3f26ffdfe8 333 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 327 2.7E-92 T 18-10-2018 IPR019405 Lactonase, 7-bladed beta propeller CH53_3182 3322010a45aa63f4c888cf3f26ffdfe8 333 Gene3D G3DSA:2.130.10.10 1 332 1.4E-119 T 18-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CH53_3182 3322010a45aa63f4c888cf3f26ffdfe8 333 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 57.073 T 18-10-2018 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 CH53_3182 3322010a45aa63f4c888cf3f26ffdfe8 333 SUPERFAMILY SSF50974 4 290 1.19E-49 T 18-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 CH53_2027 bd4aa73b5261cba02a8dbf1e3752ab86 153 Pfam PF03602 Conserved hypothetical protein 95 1 131 2.5E-37 T 18-10-2018 CH53_2027 bd4aa73b5261cba02a8dbf1e3752ab86 153 PIRSF PIRSF004553 1 135 1.2E-36 T 18-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CH53_2027 bd4aa73b5261cba02a8dbf1e3752ab86 153 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 133 2.4E-40 T 18-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CH53_2027 bd4aa73b5261cba02a8dbf1e3752ab86 153 Gene3D G3DSA:3.40.50.150 1 144 1.8E-39 T 18-10-2018 CH53_2027 bd4aa73b5261cba02a8dbf1e3752ab86 153 SUPERFAMILY SSF53335 2 133 1.18E-34 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_2027 bd4aa73b5261cba02a8dbf1e3752ab86 153 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 68 74 - T 18-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CH53_811 e819672b0cb4189011f8a5998aa99361 425 Gene3D G3DSA:3.10.580.10 201 330 5.8E-43 T 18-10-2018 CH53_811 e819672b0cb4189011f8a5998aa99361 425 SMART SM01091 342 419 4.7E-23 T 18-10-2018 IPR005170 Transporter-associated domain CH53_811 e819672b0cb4189011f8a5998aa99361 425 Gene3D G3DSA:3.30.465.10 340 418 1.2E-24 T 18-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CH53_811 e819672b0cb4189011f8a5998aa99361 425 SUPERFAMILY SSF54631 192 329 1.64E-22 T 18-10-2018 CH53_811 e819672b0cb4189011f8a5998aa99361 425 Pfam PF01595 Domain of unknown function DUF21 11 184 1.3E-51 T 18-10-2018 IPR002550 CNNM, transmembrane domain CH53_811 e819672b0cb4189011f8a5998aa99361 425 SUPERFAMILY SSF56176 340 419 1.06E-18 T 18-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CH53_811 e819672b0cb4189011f8a5998aa99361 425 Pfam PF03471 Transporter associated domain 344 417 3.7E-17 T 18-10-2018 IPR005170 Transporter-associated domain CH53_2057 2db6e08eff1969062589e89b734bd0d3 176 Pfam PF09335 SNARE associated Golgi protein 41 164 1.6E-12 T 18-10-2018 IPR032816 SNARE associated Golgi protein CH53_2666 dfd0b1c45dc457789b9e655b5141b1a2 276 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 15 119 3.1E-31 T 18-10-2018 IPR010627 Peptidase A24A, N-terminal CH53_2666 dfd0b1c45dc457789b9e655b5141b1a2 276 Pfam PF01478 Type IV leader peptidase family 131 239 8.1E-22 T 18-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CH53_2666 dfd0b1c45dc457789b9e655b5141b1a2 276 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 220 235 3.0E-20 T 18-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CH53_2666 dfd0b1c45dc457789b9e655b5141b1a2 276 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 140 157 3.0E-20 T 18-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CH53_2666 dfd0b1c45dc457789b9e655b5141b1a2 276 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 208 219 3.0E-20 T 18-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CH53_2666 dfd0b1c45dc457789b9e655b5141b1a2 276 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 197 207 3.0E-20 T 18-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CH53_3837 efb1da880319a214497b3b385378559b 511 Pfam PF04293 SpoVR like protein 20 451 1.8E-175 T 18-10-2018 IPR007390 Sporulation stage V, protein R CH53_1295 7ce461e67f46138ba10359dad78c1028 324 SUPERFAMILY SSF103481 43 145 1.01E-13 T 18-10-2018 CH53_1295 7ce461e67f46138ba10359dad78c1028 324 Pfam PF00892 EamA-like transporter family 9 144 7.6E-27 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_1295 7ce461e67f46138ba10359dad78c1028 324 Pfam PF00892 EamA-like transporter family 161 273 1.1E-15 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_3683 b1621ec341dbe66ff8e5cc68d011ac20 482 Pfam PF07690 Major Facilitator Superfamily 56 433 1.8E-12 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_3683 b1621ec341dbe66ff8e5cc68d011ac20 482 Gene3D G3DSA:1.20.1250.20 16 248 1.1E-81 T 18-10-2018 CH53_3683 b1621ec341dbe66ff8e5cc68d011ac20 482 TIGRFAM TIGR00886 2A0108: nitrite transporter 47 429 2.6E-109 T 18-10-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 CH53_3683 b1621ec341dbe66ff8e5cc68d011ac20 482 Gene3D G3DSA:1.20.1250.20 249 479 3.8E-70 T 18-10-2018 CH53_3683 b1621ec341dbe66ff8e5cc68d011ac20 482 SUPERFAMILY SSF103473 27 471 5.75E-37 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_4052 3b0ee751b288bac66a588a17cf2d32ff 167 SUPERFAMILY SSF52833 4 164 2.5E-44 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_4052 3b0ee751b288bac66a588a17cf2d32ff 167 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 18-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 CH53_4052 3b0ee751b288bac66a588a17cf2d32ff 167 Pfam PF08534 Redoxin 20 163 1.3E-29 T 18-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CH53_4052 3b0ee751b288bac66a588a17cf2d32ff 167 Gene3D G3DSA:3.40.30.10 1 167 2.9E-48 T 18-10-2018 CH53_4052 3b0ee751b288bac66a588a17cf2d32ff 167 Hamap MF_00269 Thiol peroxidase [tpx]. 4 167 40.404 T 18-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 CH53_3443 597333e705a5aa8ef81a1b54f6080b12 209 Gene3D G3DSA:3.40.50.12740 2 206 5.7E-56 T 18-10-2018 CH53_3443 597333e705a5aa8ef81a1b54f6080b12 209 SMART SM00448 2 115 1.1E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3443 597333e705a5aa8ef81a1b54f6080b12 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 2.2E-12 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3443 597333e705a5aa8ef81a1b54f6080b12 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 2.2E-12 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3443 597333e705a5aa8ef81a1b54f6080b12 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 2.2E-12 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3443 597333e705a5aa8ef81a1b54f6080b12 209 SUPERFAMILY SSF52172 1 124 7.12E-29 T 18-10-2018 IPR011006 CheY-like superfamily CH53_3443 597333e705a5aa8ef81a1b54f6080b12 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3443 597333e705a5aa8ef81a1b54f6080b12 209 SMART SM00421 143 200 8.3E-20 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3443 597333e705a5aa8ef81a1b54f6080b12 209 Pfam PF00072 Response regulator receiver domain 4 115 3.2E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3443 597333e705a5aa8ef81a1b54f6080b12 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 4.6E-19 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3443 597333e705a5aa8ef81a1b54f6080b12 209 SUPERFAMILY SSF46894 130 206 4.76E-21 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_1651 8fc9b566004cd09dc49b73629acac6a7 560 Pfam PF00884 Sulfatase 250 538 1.7E-42 T 18-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CH53_1651 8fc9b566004cd09dc49b73629acac6a7 560 Pfam PF08019 Domain of unknown function (DUF1705) 57 177 4.7E-17 T 18-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 CH53_1651 8fc9b566004cd09dc49b73629acac6a7 560 SUPERFAMILY SSF53649 250 542 2.43E-17 T 18-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CH53_1651 8fc9b566004cd09dc49b73629acac6a7 560 Gene3D G3DSA:3.40.720.10 243 553 2.4E-58 T 18-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CH53_4218 be6db0efc9472df1b3e0eebbf7e29d77 260 Pfam PF13935 Ead/Ea22-like protein 7 147 4.2E-7 T 18-10-2018 IPR025153 Ead/Ea22-like protein CH53_3252 3e361fc43ec043eb9243820a5768ef64 531 Gene3D G3DSA:3.40.50.300 282 530 1.8E-56 T 18-10-2018 CH53_3252 3e361fc43ec043eb9243820a5768ef64 531 Pfam PF00005 ABC transporter 18 184 8.1E-18 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3252 3e361fc43ec043eb9243820a5768ef64 531 SUPERFAMILY SSF52540 6 237 4.11E-44 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3252 3e361fc43ec043eb9243820a5768ef64 531 Pfam PF00005 ABC transporter 336 467 1.1E-24 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3252 3e361fc43ec043eb9243820a5768ef64 531 Pfam PF12848 ABC transporter 224 309 4.2E-20 T 18-10-2018 IPR032781 ABC-transporter extension domain CH53_3252 3e361fc43ec043eb9243820a5768ef64 531 SMART SM00382 26 228 2.6E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3252 3e361fc43ec043eb9243820a5768ef64 531 SMART SM00382 344 512 5.0E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3252 3e361fc43ec043eb9243820a5768ef64 531 SUPERFAMILY SSF52540 298 523 1.54E-47 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3252 3e361fc43ec043eb9243820a5768ef64 531 Gene3D G3DSA:3.40.50.300 2 279 2.6E-55 T 18-10-2018 CH53_951 ff1507b5d464701b709509fe76a175ee 280 TIGRFAM TIGR00444 mazG: MazG family protein 21 274 1.2E-106 T 18-10-2018 IPR011551 NTP pyrophosphohydrolase MazG CH53_951 ff1507b5d464701b709509fe76a175ee 280 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 38 111 6.4E-28 T 18-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CH53_951 ff1507b5d464701b709509fe76a175ee 280 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 185 246 9.8E-7 T 18-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CH53_951 ff1507b5d464701b709509fe76a175ee 280 SUPERFAMILY SSF101386 153 249 7.1E-23 T 18-10-2018 CH53_951 ff1507b5d464701b709509fe76a175ee 280 Gene3D G3DSA:1.10.287.1080 146 279 1.4E-47 T 18-10-2018 CH53_951 ff1507b5d464701b709509fe76a175ee 280 SUPERFAMILY SSF101386 14 113 1.66E-24 T 18-10-2018 CH53_951 ff1507b5d464701b709509fe76a175ee 280 Gene3D G3DSA:1.10.287.1080 12 142 2.1E-44 T 18-10-2018 CH53_3260 5ba7644255b7ad4bf35778b5c23a5942 420 Gene3D G3DSA:2.40.420.20 344 405 2.1E-29 T 18-10-2018 CH53_3260 5ba7644255b7ad4bf35778b5c23a5942 420 Pfam PF13437 HlyD family secretion protein 235 332 1.2E-8 T 18-10-2018 CH53_3260 5ba7644255b7ad4bf35778b5c23a5942 420 Gene3D G3DSA:2.40.50.100 74 269 2.1E-29 T 18-10-2018 CH53_3260 5ba7644255b7ad4bf35778b5c23a5942 420 Gene3D G3DSA:1.10.287.470 108 235 2.1E-29 T 18-10-2018 CH53_3260 5ba7644255b7ad4bf35778b5c23a5942 420 Gene3D G3DSA:2.40.30.170 70 342 2.1E-29 T 18-10-2018 CH53_2316 a3f58c17c218810008e9c3b170257c3f 409 Gene3D G3DSA:1.20.1250.20 27 402 2.7E-46 T 18-10-2018 CH53_2316 a3f58c17c218810008e9c3b170257c3f 409 Pfam PF07690 Major Facilitator Superfamily 32 252 7.1E-28 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_2316 a3f58c17c218810008e9c3b170257c3f 409 SUPERFAMILY SSF103473 19 405 1.28E-54 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF13332 Haemagluttinin repeat 2004 2064 0.012 T 18-10-2018 IPR025157 Hemagglutinin repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF13332 Haemagluttinin repeat 2157 2267 1.7E-6 T 18-10-2018 IPR025157 Hemagglutinin repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF13332 Haemagluttinin repeat 2304 2479 7.2E-43 T 18-10-2018 IPR025157 Hemagglutinin repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF13332 Haemagluttinin repeat 1807 1855 5.1E-4 T 18-10-2018 IPR025157 Hemagglutinin repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF13332 Haemagluttinin repeat 1924 2001 4.1E-4 T 18-10-2018 IPR025157 Hemagglutinin repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 107 203 5.4E-22 T 18-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Gene3D G3DSA:2.160.20.10 74 347 4.2E-105 T 18-10-2018 IPR012334 Pectin lyase fold CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 SUPERFAMILY SSF51126 76 357 5.34E-68 T 18-10-2018 IPR011050 Pectin lyase fold/virulence factor CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 SMART SM00912 88 208 4.1E-45 T 18-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 4.1E-6 T 18-10-2018 IPR024973 ESPR domain CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF05860 haemagglutination activity domain 74 207 2.3E-32 T 18-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF05594 Haemagluttinin repeat 1200 1262 2.2E-4 T 18-10-2018 IPR008619 Filamentous haemagglutinin repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF05594 Haemagluttinin repeat 1449 1492 130.0 T 18-10-2018 IPR008619 Filamentous haemagglutinin repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF05594 Haemagluttinin repeat 2093 2135 34.0 T 18-10-2018 IPR008619 Filamentous haemagglutinin repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF05594 Haemagluttinin repeat 834 891 1.1 T 18-10-2018 IPR008619 Filamentous haemagglutinin repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF05594 Haemagluttinin repeat 1011 1096 0.52 T 18-10-2018 IPR008619 Filamentous haemagglutinin repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF05594 Haemagluttinin repeat 1271 1300 150.0 T 18-10-2018 IPR008619 Filamentous haemagglutinin repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF05594 Haemagluttinin repeat 626 672 7.0 T 18-10-2018 IPR008619 Filamentous haemagglutinin repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF05594 Haemagluttinin repeat 757 830 0.33 T 18-10-2018 IPR008619 Filamentous haemagglutinin repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF05594 Haemagluttinin repeat 490 564 5.0 T 18-10-2018 IPR008619 Filamentous haemagglutinin repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF05594 Haemagluttinin repeat 255 333 0.0012 T 18-10-2018 IPR008619 Filamentous haemagglutinin repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF05594 Haemagluttinin repeat 921 970 1.8 T 18-10-2018 IPR008619 Filamentous haemagglutinin repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF14437 MafB19-like deaminase 3046 3129 1.1E-9 T 18-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 Pfam PF04829 Pre-toxin domain with VENN motif 2811 2860 9.5E-24 T 18-10-2018 IPR006914 VENN motif-containing domain CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 513 543 0.032 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1182 1223 0.055 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 871 906 1.3 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 353 387 2.3E-5 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 732 769 0.35 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1357 1386 0.0066 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1262 1300 0.58 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 769 809 2.9E-9 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1032 1062 0.018 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_3110 2281ea3e5cd9b91e1a60571beaf4aa7a 3167 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 809 851 7.8E-4 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH53_4353 93419c898712283de79762bd4ef6213d 323 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 3 116 4.2E-45 T 18-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 CH53_4353 93419c898712283de79762bd4ef6213d 323 Pfam PF03610 PTS system fructose IIA component 5 117 1.0E-33 T 18-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CH53_4353 93419c898712283de79762bd4ef6213d 323 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 164 310 5.4E-58 T 18-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CH53_4353 93419c898712283de79762bd4ef6213d 323 SUPERFAMILY SSF53062 3 131 1.83E-36 T 18-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CH53_4353 93419c898712283de79762bd4ef6213d 323 Gene3D G3DSA:3.40.50.510 2 133 5.0E-42 T 18-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CH53_4353 93419c898712283de79762bd4ef6213d 323 Pfam PF03830 PTS system sorbose subfamily IIB component 164 310 1.3E-56 T 18-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CH53_4353 93419c898712283de79762bd4ef6213d 323 SUPERFAMILY SSF52728 162 321 3.53E-56 T 18-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CH53_4353 93419c898712283de79762bd4ef6213d 323 Gene3D G3DSA:3.40.35.10 159 323 1.5E-61 T 18-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CH53_227 3172c1da8fa752ed7562d2bbd4aa74bd 508 Pfam PF00324 Amino acid permease 25 478 4.5E-142 T 18-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CH53_227 3172c1da8fa752ed7562d2bbd4aa74bd 508 Gene3D G3DSA:1.20.1740.10 16 485 1.7E-63 T 18-10-2018 CH53_227 3172c1da8fa752ed7562d2bbd4aa74bd 508 ProSitePatterns PS00218 Amino acid permeases signature. 50 81 - T 18-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CH53_227 3172c1da8fa752ed7562d2bbd4aa74bd 508 PIRSF PIRSF006060 3 494 5.4E-81 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_1773 e3af2fa9f96cac4591531399963718d2 156 Gene3D G3DSA:1.20.5.620 62 122 1.3E-24 T 18-10-2018 CH53_1773 e3af2fa9f96cac4591531399963718d2 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 5.7E-60 T 18-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 CH53_1773 e3af2fa9f96cac4591531399963718d2 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 8.9E-39 T 18-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CH53_1773 e3af2fa9f96cac4591531399963718d2 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.234 T 18-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CH53_1773 e3af2fa9f96cac4591531399963718d2 156 SUPERFAMILY SSF81573 63 121 3.14E-15 T 18-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CH53_2913 d97c1779c82edb437e2fdb77c9237cbc 339 Pfam PF13439 Glycosyltransferase Family 4 14 167 1.6E-8 T 18-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CH53_2913 d97c1779c82edb437e2fdb77c9237cbc 339 Pfam PF00534 Glycosyl transferases group 1 180 309 4.4E-22 T 18-10-2018 IPR001296 Glycosyl transferase, family 1 CH53_2913 d97c1779c82edb437e2fdb77c9237cbc 339 Gene3D G3DSA:3.40.50.2000 2 173 9.9E-11 T 18-10-2018 CH53_2913 d97c1779c82edb437e2fdb77c9237cbc 339 Gene3D G3DSA:3.40.50.2000 174 323 9.4E-28 T 18-10-2018 CH53_2913 d97c1779c82edb437e2fdb77c9237cbc 339 SUPERFAMILY SSF53756 3 332 1.17E-51 T 18-10-2018 CH53_196 02afeb459ff82267c97cc70f4a07ac1c 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 18-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CH53_196 02afeb459ff82267c97cc70f4a07ac1c 484 Gene3D G3DSA:3.40.309.10 262 451 1.0E-188 T 18-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CH53_196 02afeb459ff82267c97cc70f4a07ac1c 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 18-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CH53_196 02afeb459ff82267c97cc70f4a07ac1c 484 Gene3D G3DSA:3.40.605.10 20 474 1.0E-188 T 18-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CH53_196 02afeb459ff82267c97cc70f4a07ac1c 484 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 477 5.2E-218 T 18-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CH53_196 02afeb459ff82267c97cc70f4a07ac1c 484 SUPERFAMILY SSF53720 11 482 1.57E-174 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CH53_196 02afeb459ff82267c97cc70f4a07ac1c 484 Pfam PF00171 Aldehyde dehydrogenase family 20 477 3.1E-174 T 18-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CH53_2568 7800d0d26e92798b94fd4bea89a7cc11 130 Pfam PF13683 Integrase core domain 47 109 4.7E-29 T 18-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CH53_2568 7800d0d26e92798b94fd4bea89a7cc11 130 SUPERFAMILY SSF53098 41 116 2.09E-14 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_4055 6645a6220d0bff16467b697ab6d0124e 152 Pfam PF08808 RES domain 3 147 4.9E-25 T 18-10-2018 IPR014914 RES domain CH53_4055 6645a6220d0bff16467b697ab6d0124e 152 SMART SM00953 15 140 2.0E-32 T 18-10-2018 IPR014914 RES domain CH53_2102 59d4e2027d8be6081470580ec9237fb1 666 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 153 606 99.73 T 18-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CH53_2102 59d4e2027d8be6081470580ec9237fb1 666 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 153 605 7.0E-224 T 18-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CH53_2102 59d4e2027d8be6081470580ec9237fb1 666 Pfam PF01964 Radical SAM ThiC family 154 602 5.4E-200 T 18-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CH53_2102 59d4e2027d8be6081470580ec9237fb1 666 Gene3D G3DSA:3.20.20.540 224 537 2.3E-153 T 18-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CH53_2102 59d4e2027d8be6081470580ec9237fb1 666 Pfam PF13667 ThiC-associated domain 33 113 3.2E-32 T 18-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CH53_1372 adfb6c986aa6232f0b16542e6b3a53df 173 Pfam PF13247 4Fe-4S dicluster domain 54 146 2.4E-9 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_1372 adfb6c986aa6232f0b16542e6b3a53df 173 Gene3D G3DSA:3.30.70.20 64 122 1.9E-27 T 18-10-2018 CH53_1372 adfb6c986aa6232f0b16542e6b3a53df 173 SUPERFAMILY SSF54862 1 159 6.49E-39 T 18-10-2018 CH53_1372 adfb6c986aa6232f0b16542e6b3a53df 173 Gene3D G3DSA:3.30.70.20 6 148 1.9E-27 T 18-10-2018 CH53_1372 adfb6c986aa6232f0b16542e6b3a53df 173 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_1837 be8a98d6b48e1d5aceaa4315071e1243 277 SUPERFAMILY SSF56281 4 273 4.59E-34 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_1837 be8a98d6b48e1d5aceaa4315071e1243 277 Pfam PF00753 Metallo-beta-lactamase superfamily 19 80 2.9E-11 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_1837 be8a98d6b48e1d5aceaa4315071e1243 277 SMART SM00849 21 249 2.6E-5 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_1837 be8a98d6b48e1d5aceaa4315071e1243 277 Gene3D G3DSA:3.60.15.10 1 274 7.1E-73 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_424 3cc73989d98ed18098ee8de811cde148 376 Pfam PF03600 Citrate transporter 30 315 9.5E-25 T 18-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CH53_2745 bfe7255760ddc81ffcf7b7d00e848e0c 233 Pfam PF17185 NlpE C-terminal OB domain 142 230 9.2E-37 T 18-10-2018 IPR033450 NlpE, C-terminal OB domain CH53_2745 bfe7255760ddc81ffcf7b7d00e848e0c 233 Gene3D G3DSA:2.40.50.540 144 233 2.9E-32 T 18-10-2018 IPR038139 NlpE, C-terminal domain superfamily CH53_2745 bfe7255760ddc81ffcf7b7d00e848e0c 233 Gene3D G3DSA:2.40.128.300 20 117 3.9E-26 T 18-10-2018 CH53_2745 bfe7255760ddc81ffcf7b7d00e848e0c 233 Pfam PF04170 NlpE N-terminal domain 38 128 1.4E-22 T 18-10-2018 IPR007298 Copper resistance lipoprotein NlpE CH53_3277 200dfaf11f086b074b0085628362d61c 140 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 1 135 5.3E-49 T 18-10-2018 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 CH53_3277 200dfaf11f086b074b0085628362d61c 140 SUPERFAMILY SSF53163 1 138 8.37E-31 T 18-10-2018 IPR023430 Peptidase HybD-like domain superfamily CH53_3277 200dfaf11f086b074b0085628362d61c 140 Pfam PF01750 Hydrogenase maturation protease 11 128 3.9E-27 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CH53_3277 200dfaf11f086b074b0085628362d61c 140 Gene3D G3DSA:3.40.50.1450 1 140 7.7E-54 T 18-10-2018 IPR023430 Peptidase HybD-like domain superfamily CH53_3277 200dfaf11f086b074b0085628362d61c 140 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 1 128 5.0E-32 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CH53_3277 200dfaf11f086b074b0085628362d61c 140 PRINTS PR00446 Hydrogen uptake protein signature 4 15 3.5E-9 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CH53_3277 200dfaf11f086b074b0085628362d61c 140 PRINTS PR00446 Hydrogen uptake protein signature 56 72 3.5E-9 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CH53_3277 200dfaf11f086b074b0085628362d61c 140 PRINTS PR00446 Hydrogen uptake protein signature 45 55 3.5E-9 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CH53_3277 200dfaf11f086b074b0085628362d61c 140 PRINTS PR00446 Hydrogen uptake protein signature 22 39 3.5E-9 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CH53_1666 33c2d4dc620eef532428f001a9c39b8b 484 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 2.7E-185 T 18-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 CH53_1666 33c2d4dc620eef532428f001a9c39b8b 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 5.8E-83 T 18-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CH53_1666 33c2d4dc620eef532428f001a9c39b8b 484 SUPERFAMILY SSF53067 242 482 3.8E-64 T 18-10-2018 CH53_1666 33c2d4dc620eef532428f001a9c39b8b 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 435 5.4E-30 T 18-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CH53_1666 33c2d4dc620eef532428f001a9c39b8b 484 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 18-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_1666 33c2d4dc620eef532428f001a9c39b8b 484 SUPERFAMILY SSF53067 2 242 4.49E-75 T 18-10-2018 CH53_1666 33c2d4dc620eef532428f001a9c39b8b 484 Gene3D G3DSA:3.30.420.40 1 241 7.5E-95 T 18-10-2018 CH53_1666 33c2d4dc620eef532428f001a9c39b8b 484 PIRSF PIRSF000538 1 484 3.4E-137 T 18-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CH53_1666 33c2d4dc620eef532428f001a9c39b8b 484 Gene3D G3DSA:3.30.420.40 242 483 1.3E-91 T 18-10-2018 CH53_3296 c96ab57b3caa56f40a5a1c443f07f536 407 SUPERFAMILY SSF103473 11 394 3.92E-51 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_3296 c96ab57b3caa56f40a5a1c443f07f536 407 Pfam PF07690 Major Facilitator Superfamily 11 352 1.4E-33 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_3296 c96ab57b3caa56f40a5a1c443f07f536 407 Gene3D G3DSA:1.20.1250.20 6 387 5.2E-44 T 18-10-2018 CH53_2950 adb998bd1ba637aac8d002159c1a4486 286 SUPERFAMILY SSF63829 10 270 5.01E-48 T 18-10-2018 CH53_2950 adb998bd1ba637aac8d002159c1a4486 286 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 12 252 6.6E-56 T 18-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region CH53_2950 adb998bd1ba637aac8d002159c1a4486 286 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 233 251 1.7E-17 T 18-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) CH53_2950 adb998bd1ba637aac8d002159c1a4486 286 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 13 30 1.7E-17 T 18-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) CH53_2950 adb998bd1ba637aac8d002159c1a4486 286 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 191 208 1.7E-17 T 18-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) CH53_2950 adb998bd1ba637aac8d002159c1a4486 286 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 89 110 1.7E-17 T 18-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) CH53_2950 adb998bd1ba637aac8d002159c1a4486 286 Gene3D G3DSA:2.120.10.30 1 282 1.2E-68 T 18-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CH53_1106 80cb79434d8f534ec6138c59b0efe592 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 18-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CH53_1106 80cb79434d8f534ec6138c59b0efe592 382 Gene3D G3DSA:1.20.1090.10 184 382 2.7E-68 T 18-10-2018 CH53_1106 80cb79434d8f534ec6138c59b0efe592 382 Gene3D G3DSA:3.40.50.1970 1 183 5.6E-52 T 18-10-2018 CH53_1106 80cb79434d8f534ec6138c59b0efe592 382 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 2 378 2.7E-172 T 18-10-2018 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77 CH53_1106 80cb79434d8f534ec6138c59b0efe592 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 374 6.1E-117 T 18-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CH53_1106 80cb79434d8f534ec6138c59b0efe592 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 18-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CH53_1106 80cb79434d8f534ec6138c59b0efe592 382 SUPERFAMILY SSF56796 3 380 2.36E-121 T 18-10-2018 CH53_1919 f48166d8cb6a3ed233796310e56e7ab5 227 Gene3D G3DSA:3.30.1500.10 1 217 1.5E-58 T 18-10-2018 IPR036912 Haem-binding HasA superfamily CH53_1919 f48166d8cb6a3ed233796310e56e7ab5 227 Pfam PF06438 Heme-binding protein A (HasA) 1 226 4.2E-35 T 18-10-2018 IPR010495 Haem-binding HasA CH53_1919 f48166d8cb6a3ed233796310e56e7ab5 227 SUPERFAMILY SSF54621 3 203 1.44E-14 T 18-10-2018 IPR036912 Haem-binding HasA superfamily CH53_2257 a5d779dff41d8cb8a6ff9be791a51bf4 84 PIRSF PIRSF003113 1 83 9.8E-22 T 18-10-2018 IPR002634 BolA protein CH53_2257 a5d779dff41d8cb8a6ff9be791a51bf4 84 Gene3D G3DSA:3.30.300.90 1 84 2.1E-36 T 18-10-2018 CH53_2257 a5d779dff41d8cb8a6ff9be791a51bf4 84 Pfam PF01722 BolA-like protein 19 74 1.6E-14 T 18-10-2018 IPR002634 BolA protein CH53_2257 a5d779dff41d8cb8a6ff9be791a51bf4 84 SUPERFAMILY SSF82657 2 82 2.75E-29 T 18-10-2018 IPR036065 BolA-like superfamily CH53_1500 7d8ebdd2b2d8b7fb7990d30128188a4c 272 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 33 153 4.7E-37 T 18-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CH53_1500 7d8ebdd2b2d8b7fb7990d30128188a4c 272 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 162 247 6.1E-29 T 18-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CH53_1500 7d8ebdd2b2d8b7fb7990d30128188a4c 272 SUPERFAMILY SSF54534 43 250 1.45E-64 T 18-10-2018 CH53_1500 7d8ebdd2b2d8b7fb7990d30128188a4c 272 Gene3D G3DSA:3.10.50.40 144 258 5.6E-42 T 18-10-2018 CH53_1500 7d8ebdd2b2d8b7fb7990d30128188a4c 272 Gene3D G3DSA:1.10.287.460 26 143 2.3E-29 T 18-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 CH53_3557 cec8d96ab0a0a6ee2c1c67ffd07c43c7 219 PRINTS PR01008 Flagellar L-ring protein signature 133 148 4.3E-35 T 18-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CH53_3557 cec8d96ab0a0a6ee2c1c67ffd07c43c7 219 PRINTS PR01008 Flagellar L-ring protein signature 159 175 4.3E-35 T 18-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CH53_3557 cec8d96ab0a0a6ee2c1c67ffd07c43c7 219 PRINTS PR01008 Flagellar L-ring protein signature 60 72 4.3E-35 T 18-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CH53_3557 cec8d96ab0a0a6ee2c1c67ffd07c43c7 219 PRINTS PR01008 Flagellar L-ring protein signature 180 194 4.3E-35 T 18-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CH53_3557 cec8d96ab0a0a6ee2c1c67ffd07c43c7 219 PRINTS PR01008 Flagellar L-ring protein signature 196 210 4.3E-35 T 18-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CH53_3557 cec8d96ab0a0a6ee2c1c67ffd07c43c7 219 Pfam PF02107 Flagellar L-ring protein 35 218 9.8E-61 T 18-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CH53_3557 cec8d96ab0a0a6ee2c1c67ffd07c43c7 219 Hamap MF_00415 Flagellar L-ring protein [flgH]. 2 217 26.904 T 18-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CH53_2244 ee33c7c2b815b6057cf067134adc9524 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 7.9E-29 T 18-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CH53_2244 ee33c7c2b815b6057cf067134adc9524 95 SUPERFAMILY SSF69754 1 95 5.36E-36 T 18-10-2018 IPR036567 Ribosome hibernation promotion factor-like CH53_2244 ee33c7c2b815b6057cf067134adc9524 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 6.2E-36 T 18-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CH53_2244 ee33c7c2b815b6057cf067134adc9524 95 Gene3D G3DSA:3.30.160.100 1 95 2.7E-39 T 18-10-2018 IPR036567 Ribosome hibernation promotion factor-like CH53_4257 d04bdfcbb14e71d576056e0fa5db1564 184 Pfam PF14002 YniB-like protein 15 179 8.2E-82 T 18-10-2018 IPR025229 YniB-like protein CH53_4257 d04bdfcbb14e71d576056e0fa5db1564 184 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 181 1.0E-90 T 18-10-2018 CH53_1909 7c14cc01556c73f53cb5391524b005ea 294 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 3.6E-105 T 18-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 CH53_1909 7c14cc01556c73f53cb5391524b005ea 294 Gene3D G3DSA:3.20.20.220 1 294 1.4E-118 T 18-10-2018 CH53_1909 7c14cc01556c73f53cb5391524b005ea 294 Pfam PF02219 Methylenetetrahydrofolate reductase 16 291 1.7E-110 T 18-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CH53_1909 7c14cc01556c73f53cb5391524b005ea 294 SUPERFAMILY SSF51730 22 293 7.65E-97 T 18-10-2018 IPR029041 FAD-linked oxidoreductase-like CH53_3893 80512e533c552f7ebd8b660c206050d5 104 Pfam PF04972 BON domain 37 104 1.7E-20 T 18-10-2018 IPR007055 BON domain CH53_3893 80512e533c552f7ebd8b660c206050d5 104 SMART SM00749 42 104 4.4E-7 T 18-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria CH53_2980 d44752022d837a85ced20d4eea8b5cbc 110 SUPERFAMILY SSF143737 3 108 1.83E-46 T 18-10-2018 IPR038025 Antitoxin CbeA superfamily CH53_2980 d44752022d837a85ced20d4eea8b5cbc 110 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 10 108 2.1E-44 T 18-10-2018 IPR009320 Antitoxin CbeA GO:0051495 CH53_2980 d44752022d837a85ced20d4eea8b5cbc 110 Gene3D G3DSA:3.30.450.20 15 109 1.9E-42 T 18-10-2018 CH53_915 b53eebf5f1ee25613c46953a89c130f1 192 Pfam PF13730 Helix-turn-helix domain 62 109 9.1E-8 T 18-10-2018 CH53_915 b53eebf5f1ee25613c46953a89c130f1 192 Gene3D G3DSA:1.10.10.10 34 157 6.6E-7 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3985 e069280c42d06063a59af0678953aee6 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 41 2.7E-24 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_3985 e069280c42d06063a59af0678953aee6 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 2.7E-24 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_3985 e069280c42d06063a59af0678953aee6 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 2.7E-24 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_3985 e069280c42d06063a59af0678953aee6 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 2.7E-24 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_3985 e069280c42d06063a59af0678953aee6 113 SMART SM00418 8 86 6.0E-29 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_3985 e069280c42d06063a59af0678953aee6 113 Gene3D G3DSA:1.10.10.10 5 90 2.7E-26 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3985 e069280c42d06063a59af0678953aee6 113 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 6.9E-17 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_3985 e069280c42d06063a59af0678953aee6 113 SUPERFAMILY SSF46785 2 90 9.15E-26 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3489 9656c43a998df4b8b577180f18f62d4e 294 SUPERFAMILY SSF57938 207 279 6.54E-7 T 18-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CH53_3489 9656c43a998df4b8b577180f18f62d4e 294 Gene3D G3DSA:2.60.260.20 205 290 7.6E-7 T 18-10-2018 CH53_3489 9656c43a998df4b8b577180f18f62d4e 294 Gene3D G3DSA:2.10.230.10 212 276 7.6E-7 T 18-10-2018 CH53_2955 9a0dcec4dafede5187aff128e10f9e2b 327 Gene3D G3DSA:3.40.50.720 3 169 2.4E-30 T 18-10-2018 CH53_2955 9a0dcec4dafede5187aff128e10f9e2b 327 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 5 118 6.6E-16 T 18-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 CH53_2955 9a0dcec4dafede5187aff128e10f9e2b 327 SUPERFAMILY SSF51735 1 142 7.08E-20 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1812 d0a8669a05a6359fce09fa4de0679bdd 290 Pfam PF03631 Virulence factor BrkB 25 272 3.2E-55 T 18-10-2018 IPR017039 Virulence factor BrkB CH53_1812 d0a8669a05a6359fce09fa4de0679bdd 290 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 15 273 9.9E-92 T 18-10-2018 IPR017039 Virulence factor BrkB CH53_1812 d0a8669a05a6359fce09fa4de0679bdd 290 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 1 289 23.147 T 18-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial CH53_1812 d0a8669a05a6359fce09fa4de0679bdd 290 PIRSF PIRSF035875 4 290 4.4E-61 T 18-10-2018 IPR017039 Virulence factor BrkB CH53_2681 416c8b3626bcee36991c7b14d3661f82 244 Pfam PF03741 Integral membrane protein TerC family 16 202 6.5E-54 T 18-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 CH53_3815 226d7e509fde22cfaa6727a79fa7e845 114 Pfam PF01042 Endoribonuclease L-PSP 4 113 9.9E-25 T 18-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CH53_3815 226d7e509fde22cfaa6727a79fa7e845 114 SUPERFAMILY SSF55298 2 113 1.88E-25 T 18-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CH53_3815 226d7e509fde22cfaa6727a79fa7e845 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 18-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 CH53_3815 226d7e509fde22cfaa6727a79fa7e845 114 Gene3D G3DSA:3.30.1330.40 1 114 8.1E-34 T 18-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CH53_3972 054fcc5a806332170340f20f38c4e150 108 SUPERFAMILY SSF103481 8 105 7.19E-5 T 18-10-2018 CH53_3972 054fcc5a806332170340f20f38c4e150 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 106 1.6E-40 T 18-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CH53_3972 054fcc5a806332170340f20f38c4e150 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 22.602 T 18-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CH53_1513 6ae9c4f879aaaa3d39cfa577c2b0e8e5 260 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 235 6.3E-28 T 18-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CH53_1513 6ae9c4f879aaaa3d39cfa577c2b0e8e5 260 SUPERFAMILY SSF54506 1 259 2.51E-69 T 18-10-2018 CH53_1513 6ae9c4f879aaaa3d39cfa577c2b0e8e5 260 PIRSF PIRSF016184 1 260 1.6E-48 T 18-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CH53_1513 6ae9c4f879aaaa3d39cfa577c2b0e8e5 260 Pfam PF02567 Phenazine biosynthesis-like protein 8 256 1.0E-47 T 18-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CH53_1513 6ae9c4f879aaaa3d39cfa577c2b0e8e5 260 Gene3D G3DSA:3.10.310.10 5 252 2.0E-86 T 18-10-2018 CH53_1513 6ae9c4f879aaaa3d39cfa577c2b0e8e5 260 Gene3D G3DSA:3.10.310.10 120 248 2.0E-86 T 18-10-2018 CH53_2164 28ee7dca1c988ae9a4f0da17f30f986a 99 SUPERFAMILY SSF47413 6 66 8.31E-14 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_2164 28ee7dca1c988ae9a4f0da17f30f986a 99 Gene3D G3DSA:1.10.260.40 4 86 4.6E-14 T 18-10-2018 CH53_2164 28ee7dca1c988ae9a4f0da17f30f986a 99 Pfam PF01381 Helix-turn-helix 19 66 9.3E-13 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_2164 28ee7dca1c988ae9a4f0da17f30f986a 99 SMART SM00530 14 69 1.8E-9 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_4054 aa45f1f6adf50cc29730e449298802ae 148 Pfam PF09722 Protein of unknown function (DUF2384) 94 145 4.2E-13 T 18-10-2018 IPR024467 Domain of unknown function DUF2384 CH53_4054 aa45f1f6adf50cc29730e449298802ae 148 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 15 148 2.3E-54 T 18-10-2018 IPR011979 Conserved hypothetical protein CHP02293 CH53_1653 d8d6fb46271dcef5b33098b6bc902d67 487 Gene3D G3DSA:3.40.50.1820 107 347 2.4E-29 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_1653 d8d6fb46271dcef5b33098b6bc902d67 487 SUPERFAMILY SSF53474 105 341 4.4E-25 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_1653 d8d6fb46271dcef5b33098b6bc902d67 487 Pfam PF12146 Serine aminopeptidase, S33 118 238 7.7E-11 T 18-10-2018 IPR022742 Serine aminopeptidase, S33 CH53_2333 91439c41ced3223994f544e19e6456d2 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 2.5E-52 T 18-10-2018 IPR016476 SH3 domain protein CH53_2333 91439c41ced3223994f544e19e6456d2 206 PIRSF PIRSF006158 1 205 3.0E-70 T 18-10-2018 IPR016476 SH3 domain protein CH53_2333 91439c41ced3223994f544e19e6456d2 206 SMART SM00287 23 89 2.5E-10 T 18-10-2018 IPR003646 SH3-like domain, bacterial-type CH53_2333 91439c41ced3223994f544e19e6456d2 206 Gene3D G3DSA:2.30.30.40 33 85 2.0E-6 T 18-10-2018 CH53_2333 91439c41ced3223994f544e19e6456d2 206 Pfam PF08239 Bacterial SH3 domain 34 85 5.1E-8 T 18-10-2018 IPR003646 SH3-like domain, bacterial-type CH53_2180 e314a4a446fbfd028aa3f78a7f24be0d 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 309 3.3E-37 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_1342 a7e733b9b12aa5d19c3640daa3aba6a3 156 SUPERFAMILY SSF52540 28 135 1.37E-20 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1342 a7e733b9b12aa5d19c3640daa3aba6a3 156 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 5.2E-51 T 18-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CH53_1342 a7e733b9b12aa5d19c3640daa3aba6a3 156 Gene3D G3DSA:3.40.50.300 1 153 6.9E-47 T 18-10-2018 CH53_1342 a7e733b9b12aa5d19c3640daa3aba6a3 156 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 1.3E-40 T 18-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CH53_389 2968beefae6f6cf38b048f6726704c93 164 SUPERFAMILY SSF116960 1 164 3.14E-69 T 18-10-2018 CH53_389 2968beefae6f6cf38b048f6726704c93 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 37.751 T 18-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CH53_389 2968beefae6f6cf38b048f6726704c93 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 4.0E-94 T 18-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CH53_389 2968beefae6f6cf38b048f6726704c93 164 Gene3D G3DSA:1.10.287.680 1 53 5.4E-33 T 18-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily CH53_389 2968beefae6f6cf38b048f6726704c93 164 Pfam PF03887 YfbU domain 1 164 4.4E-69 T 18-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CH53_389 2968beefae6f6cf38b048f6726704c93 164 Gene3D G3DSA:1.10.3190.10 54 164 2.0E-39 T 18-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily CH53_389 2968beefae6f6cf38b048f6726704c93 164 PIRSF PIRSF006272 1 164 1.5E-74 T 18-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CH53_3427 d265333652cae92a162d3e03e6744af5 147 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 3 122 4.7E-22 T 18-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein CH53_3427 d265333652cae92a162d3e03e6744af5 147 SUPERFAMILY SSF160719 28 117 1.44E-17 T 18-10-2018 CH53_3427 d265333652cae92a162d3e03e6744af5 147 Gene3D G3DSA:3.10.450.40 17 115 3.5E-5 T 18-10-2018 CH53_3427 d265333652cae92a162d3e03e6744af5 147 Pfam PF04965 Gene 25-like lysozyme 32 113 1.2E-9 T 18-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD CH53_330 24a44e636fafc2a3322ca152bc1a13bc 379 Gene3D G3DSA:1.50.10.10 1 379 3.5E-163 T 18-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 CH53_330 24a44e636fafc2a3322ca152bc1a13bc 379 Pfam PF07470 Glycosyl Hydrolase Family 88 38 376 9.7E-102 T 18-10-2018 IPR010905 Glycosyl hydrolase, family 88 CH53_330 24a44e636fafc2a3322ca152bc1a13bc 379 SUPERFAMILY SSF48208 24 376 1.36E-88 T 18-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 CH53_4295 c747e5e71dbf5f55ba96587b410b5528 194 Gene3D G3DSA:1.10.357.10 2 193 1.2E-46 T 18-10-2018 CH53_4295 c747e5e71dbf5f55ba96587b410b5528 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 3.3E-8 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_4295 c747e5e71dbf5f55ba96587b410b5528 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.3E-8 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_4295 c747e5e71dbf5f55ba96587b410b5528 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 58 5.9E-14 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_4295 c747e5e71dbf5f55ba96587b410b5528 194 SUPERFAMILY SSF46689 4 84 2.41E-16 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_4295 c747e5e71dbf5f55ba96587b410b5528 194 SUPERFAMILY SSF48498 82 189 1.5E-5 T 18-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CH53_4048 c6afa30780ea51ebf1b2590f1bd3f27f 327 Pfam PF01544 CorA-like Mg2+ transporter protein 39 322 4.9E-65 T 18-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CH53_4048 c6afa30780ea51ebf1b2590f1bd3f27f 327 SUPERFAMILY SSF144083 263 324 6.41E-13 T 18-10-2018 CH53_4048 c6afa30780ea51ebf1b2590f1bd3f27f 327 SUPERFAMILY SSF143865 11 259 3.79E-53 T 18-10-2018 CH53_4048 c6afa30780ea51ebf1b2590f1bd3f27f 327 Gene3D G3DSA:1.20.58.340 140 262 1.1E-41 T 18-10-2018 CH53_4048 c6afa30780ea51ebf1b2590f1bd3f27f 327 Gene3D G3DSA:3.30.460.20 1 139 6.7E-44 T 18-10-2018 CH53_4048 c6afa30780ea51ebf1b2590f1bd3f27f 327 Gene3D G3DSA:1.20.58.340 270 327 2.2E-9 T 18-10-2018 CH53_3708 52198ac771e699f75fa8748105a65df9 370 Pfam PF02687 FtsX-like permease family 275 363 3.1E-13 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CH53_3708 52198ac771e699f75fa8748105a65df9 370 Pfam PF12704 MacB-like periplasmic core domain 22 186 6.1E-12 T 18-10-2018 IPR025857 MacB-like periplasmic core domain CH53_3485 ccfc5553a373e9e1fb6a01ad907b6ba6 466 SMART SM00901 177 276 1.9E-29 T 18-10-2018 IPR014966 FRG domain CH53_3485 ccfc5553a373e9e1fb6a01ad907b6ba6 466 Pfam PF08867 FRG domain 181 271 2.4E-19 T 18-10-2018 IPR014966 FRG domain CH53_96 b7e507191f03af6f3fbcac2d6da0eb65 242 Gene3D G3DSA:2.60.40.10 149 242 4.9E-17 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_96 b7e507191f03af6f3fbcac2d6da0eb65 242 PRINTS PR00969 Pili chaperone signature 73 94 2.5E-24 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_96 b7e507191f03af6f3fbcac2d6da0eb65 242 PRINTS PR00969 Pili chaperone signature 128 143 2.5E-24 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_96 b7e507191f03af6f3fbcac2d6da0eb65 242 PRINTS PR00969 Pili chaperone signature 101 118 2.5E-24 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_96 b7e507191f03af6f3fbcac2d6da0eb65 242 PRINTS PR00969 Pili chaperone signature 23 32 2.5E-24 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_96 b7e507191f03af6f3fbcac2d6da0eb65 242 PRINTS PR00969 Pili chaperone signature 167 182 2.5E-24 T 18-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CH53_96 b7e507191f03af6f3fbcac2d6da0eb65 242 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 172 232 2.2E-14 T 18-10-2018 IPR016148 Pili assembly chaperone, C-terminal CH53_96 b7e507191f03af6f3fbcac2d6da0eb65 242 SUPERFAMILY SSF49584 140 233 1.57E-12 T 18-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CH53_96 b7e507191f03af6f3fbcac2d6da0eb65 242 Gene3D G3DSA:2.60.40.10 24 147 4.3E-34 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_96 b7e507191f03af6f3fbcac2d6da0eb65 242 SUPERFAMILY SSF49354 18 146 3.14E-34 T 18-10-2018 IPR008962 PapD-like superfamily CH53_96 b7e507191f03af6f3fbcac2d6da0eb65 242 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 22 147 8.5E-35 T 18-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CH53_498 4e8e6989878018342fddfd886ebf0363 411 SUPERFAMILY SSF53383 9 394 2.58E-107 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_498 4e8e6989878018342fddfd886ebf0363 411 Pfam PF00155 Aminotransferase class I and II 37 387 3.1E-57 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CH53_498 4e8e6989878018342fddfd886ebf0363 411 Gene3D G3DSA:3.40.640.10 70 293 3.4E-134 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_498 4e8e6989878018342fddfd886ebf0363 411 Gene3D G3DSA:3.90.1150.10 294 391 3.4E-134 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_4156 7191f043ef57f5c20eb53d34320e795d 129 SUPERFAMILY SSF47413 5 71 2.28E-14 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_4156 7191f043ef57f5c20eb53d34320e795d 129 SMART SM00530 10 65 3.7E-12 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_4156 7191f043ef57f5c20eb53d34320e795d 129 Gene3D G3DSA:1.10.260.40 5 72 1.1E-14 T 18-10-2018 CH53_4156 7191f043ef57f5c20eb53d34320e795d 129 Pfam PF01381 Helix-turn-helix 13 65 1.2E-12 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_661 6496f46e8435540845b54fbf793ffc3d 431 Pfam PF10797 Protein of unknown function 5 428 7.7E-166 T 18-10-2018 IPR019733 Uncharacterised protein family YhfT CH53_4113 f4e7c0827c77f5bc30bcc58056f1d9bb 437 Pfam PF01458 Uncharacterized protein family (UPF0051) 184 407 1.0E-72 T 18-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CH53_4113 f4e7c0827c77f5bc30bcc58056f1d9bb 437 SUPERFAMILY SSF101960 43 433 4.71E-110 T 18-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CH53_4113 f4e7c0827c77f5bc30bcc58056f1d9bb 437 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 146 422 3.7E-89 T 18-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 CH53_2947 3d2da1423584f0426b2a67f286bb5bed 305 Pfam PF03466 LysR substrate binding domain 89 291 5.3E-43 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_2947 3d2da1423584f0426b2a67f286bb5bed 305 Gene3D G3DSA:3.40.190.290 91 293 1.6E-64 T 18-10-2018 CH53_2947 3d2da1423584f0426b2a67f286bb5bed 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.4E-18 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2947 3d2da1423584f0426b2a67f286bb5bed 305 SUPERFAMILY SSF53850 90 296 1.36E-45 T 18-10-2018 CH53_2947 3d2da1423584f0426b2a67f286bb5bed 305 Gene3D G3DSA:1.10.10.10 3 89 4.2E-26 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2947 3d2da1423584f0426b2a67f286bb5bed 305 SUPERFAMILY SSF46785 4 112 2.37E-21 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3711 05772db9368c3ed3cc1dab66621a1b9f 102 Gene3D G3DSA:1.10.760.10 11 101 6.3E-12 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CH53_3711 05772db9368c3ed3cc1dab66621a1b9f 102 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 17 91 1.4E-8 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_3711 05772db9368c3ed3cc1dab66621a1b9f 102 SUPERFAMILY SSF46626 14 95 2.12E-13 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CH53_3548 c643600690998d033062995b94bf81c5 146 SUPERFAMILY SSF140566 2 120 5.49E-18 T 18-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 CH53_3548 c643600690998d033062995b94bf81c5 146 Gene3D G3DSA:1.20.58.300 4 120 3.2E-10 T 18-10-2018 CH53_3548 c643600690998d033062995b94bf81c5 146 Pfam PF05130 FlgN protein 2 134 9.9E-24 T 18-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CH53_1918 a34441f725a9e1c327acbd04f2b9f4de 202 Gene3D G3DSA:3.30.1500.10 1 190 2.2E-74 T 18-10-2018 IPR036912 Haem-binding HasA superfamily CH53_1918 a34441f725a9e1c327acbd04f2b9f4de 202 SUPERFAMILY SSF54621 2 175 1.57E-37 T 18-10-2018 IPR036912 Haem-binding HasA superfamily CH53_1918 a34441f725a9e1c327acbd04f2b9f4de 202 Pfam PF06438 Heme-binding protein A (HasA) 1 202 9.8E-70 T 18-10-2018 IPR010495 Haem-binding HasA CH53_3990 e130526f5289377674eccc6b52f9fadd 377 Gene3D G3DSA:3.30.390.120 313 375 3.5E-6 T 18-10-2018 CH53_3990 e130526f5289377674eccc6b52f9fadd 377 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 278 2.6E-49 T 18-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CH53_3990 e130526f5289377674eccc6b52f9fadd 377 Gene3D G3DSA:3.50.50.60 108 240 2.0E-75 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_3990 e130526f5289377674eccc6b52f9fadd 377 SUPERFAMILY SSF51905 4 180 1.12E-24 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_3990 e130526f5289377674eccc6b52f9fadd 377 Gene3D G3DSA:3.50.50.60 6 276 2.0E-75 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_3990 e130526f5289377674eccc6b52f9fadd 377 SUPERFAMILY SSF51905 121 302 4.4E-31 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_3990 e130526f5289377674eccc6b52f9fadd 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.6E-21 T 18-10-2018 CH53_3990 e130526f5289377674eccc6b52f9fadd 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.6E-21 T 18-10-2018 CH53_3990 e130526f5289377674eccc6b52f9fadd 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.6E-21 T 18-10-2018 CH53_3990 e130526f5289377674eccc6b52f9fadd 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 1.6E-21 T 18-10-2018 CH53_3990 e130526f5289377674eccc6b52f9fadd 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 1.6E-21 T 18-10-2018 CH53_3990 e130526f5289377674eccc6b52f9fadd 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 6.5E-13 T 18-10-2018 CH53_3990 e130526f5289377674eccc6b52f9fadd 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 6.5E-13 T 18-10-2018 CH53_3990 e130526f5289377674eccc6b52f9fadd 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 229 243 6.5E-13 T 18-10-2018 CH53_3990 e130526f5289377674eccc6b52f9fadd 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 275 6.5E-13 T 18-10-2018 CH53_1491 3fef15050e7a22583d27de837cc74607 64 Gene3D G3DSA:1.10.10.1100 1 57 1.8E-19 T 18-10-2018 CH53_1491 3fef15050e7a22583d27de837cc74607 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 4.4E-15 T 18-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CH53_2672 ba24b59d6c90262e5ef7bc65553b1b3c 305 Gene3D G3DSA:3.40.190.10 163 262 1.3E-61 T 18-10-2018 CH53_2672 ba24b59d6c90262e5ef7bc65553b1b3c 305 SUPERFAMILY SSF53850 88 295 6.7E-44 T 18-10-2018 CH53_2672 ba24b59d6c90262e5ef7bc65553b1b3c 305 SUPERFAMILY SSF46785 5 107 9.09E-19 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2672 ba24b59d6c90262e5ef7bc65553b1b3c 305 Gene3D G3DSA:3.40.190.10 92 289 1.3E-61 T 18-10-2018 CH53_2672 ba24b59d6c90262e5ef7bc65553b1b3c 305 Pfam PF03466 LysR substrate binding domain 88 291 2.6E-41 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_2672 ba24b59d6c90262e5ef7bc65553b1b3c 305 Gene3D G3DSA:1.10.10.10 3 91 7.3E-23 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2672 ba24b59d6c90262e5ef7bc65553b1b3c 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 6.6E-16 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2483 ba26393af9864acef6ba7c3f8b69cc9c 199 SUPERFAMILY SSF48452 47 171 1.82E-11 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_2483 ba26393af9864acef6ba7c3f8b69cc9c 199 Gene3D G3DSA:1.25.40.10 16 198 8.2E-12 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_4043 5a83bbe4444c0249d77ddfbe8526267f 101 Pfam PF03891 Domain of unknown function (DUF333) 50 97 2.8E-26 T 18-10-2018 IPR005590 Protein of unknown function DUF333 CH53_2856 8faf79381ca9303b78a370a483bcae76 259 SUPERFAMILY SSF111364 26 259 3.4E-33 T 18-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 CH53_2856 8faf79381ca9303b78a370a483bcae76 259 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 34 259 5.8E-52 T 18-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CH53_581 7d631e0241e20a1ad6003a76e8e9c0c9 118 Gene3D G3DSA:3.40.30.10 1 118 1.0E-47 T 18-10-2018 CH53_581 7d631e0241e20a1ad6003a76e8e9c0c9 118 Pfam PF03960 ArsC family 7 116 4.7E-22 T 18-10-2018 IPR006660 Arsenate reductase-like CH53_581 7d631e0241e20a1ad6003a76e8e9c0c9 118 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 117 1.6E-44 T 18-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CH53_581 7d631e0241e20a1ad6003a76e8e9c0c9 118 SUPERFAMILY SSF52833 3 117 2.24E-34 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_563 440dea2aefb2b79ba23ab7de9cdafecd 157 SMART SM00028 32 65 110.0 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_563 440dea2aefb2b79ba23ab7de9cdafecd 157 SMART SM00028 69 102 0.077 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CH53_563 440dea2aefb2b79ba23ab7de9cdafecd 157 SUPERFAMILY SSF48452 9 150 2.41E-18 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_563 440dea2aefb2b79ba23ab7de9cdafecd 157 Pfam PF12688 Tetratrico peptide repeat 35 153 5.7E-12 T 18-10-2018 CH53_563 440dea2aefb2b79ba23ab7de9cdafecd 157 Gene3D G3DSA:1.25.40.10 1 154 1.4E-20 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_634 54203c66954eb56ee8091ff49f990ccb 804 Pfam PF00030 Beta/Gamma crystallin 68 134 1.3E-7 T 18-10-2018 IPR001064 Beta/gamma crystallin CH53_634 54203c66954eb56ee8091ff49f990ccb 804 SUPERFAMILY SSF49695 20 107 2.81E-14 T 18-10-2018 IPR011024 Gamma-crystallin-like CH53_634 54203c66954eb56ee8091ff49f990ccb 804 SMART SM00247 24 108 0.0012 T 18-10-2018 IPR001064 Beta/gamma crystallin CH53_634 54203c66954eb56ee8091ff49f990ccb 804 SMART SM00247 110 205 0.0057 T 18-10-2018 IPR001064 Beta/gamma crystallin CH53_634 54203c66954eb56ee8091ff49f990ccb 804 SUPERFAMILY SSF49695 109 203 1.07E-15 T 18-10-2018 IPR011024 Gamma-crystallin-like CH53_634 54203c66954eb56ee8091ff49f990ccb 804 Gene3D G3DSA:2.60.20.10 6 109 7.3E-22 T 18-10-2018 CH53_634 54203c66954eb56ee8091ff49f990ccb 804 Gene3D G3DSA:2.60.20.10 110 205 4.4E-23 T 18-10-2018 CH53_634 54203c66954eb56ee8091ff49f990ccb 804 Pfam PF09101 Exotoxin A binding 357 412 2.7E-6 T 18-10-2018 IPR015185 Exotoxin A, binding CH53_342 f0065cefd62ebe0b0a41a1d50c6a80b8 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 18-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_342 f0065cefd62ebe0b0a41a1d50c6a80b8 376 Gene3D G3DSA:1.10.620.20 2 340 1.4E-146 T 18-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CH53_342 f0065cefd62ebe0b0a41a1d50c6a80b8 376 SUPERFAMILY SSF47240 3 340 7.11E-111 T 18-10-2018 IPR009078 Ferritin-like superfamily CH53_342 f0065cefd62ebe0b0a41a1d50c6a80b8 376 Pfam PF00268 Ribonucleotide reductase, small chain 33 332 3.6E-45 T 18-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CH53_1378 668167b391adf9c62d05369890f1d724 294 PIRSF PIRSF000103 1 293 3.7E-91 T 18-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CH53_1378 668167b391adf9c62d05369890f1d724 294 Gene3D G3DSA:1.10.1040.10 164 294 1.4E-37 T 18-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CH53_1378 668167b391adf9c62d05369890f1d724 294 Hamap MF_02032 2-hydroxy-3-oxopropionate reductase [garR]. 1 294 60.27 T 18-10-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 CH53_1378 668167b391adf9c62d05369890f1d724 294 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 281 8.6E-39 T 18-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CH53_1378 668167b391adf9c62d05369890f1d724 294 SUPERFAMILY SSF51735 1 162 2.05E-48 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1378 668167b391adf9c62d05369890f1d724 294 SUPERFAMILY SSF48179 162 291 4.08E-37 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CH53_1378 668167b391adf9c62d05369890f1d724 294 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 18-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CH53_1378 668167b391adf9c62d05369890f1d724 294 Gene3D G3DSA:3.40.50.720 1 163 4.8E-58 T 18-10-2018 CH53_1378 668167b391adf9c62d05369890f1d724 294 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 2 292 4.1E-144 T 18-10-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 CH53_1378 668167b391adf9c62d05369890f1d724 294 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 4.3E-50 T 18-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 CH53_786 e8492e57f65fb820fa4c885c2f3b2912 238 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 23 237 7.9E-70 T 18-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CH53_786 e8492e57f65fb820fa4c885c2f3b2912 238 SUPERFAMILY SSF53901 40 159 1.32E-7 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_786 e8492e57f65fb820fa4c885c2f3b2912 238 Gene3D G3DSA:3.40.47.10 11 172 4.0E-5 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 CH53_3887 325b8b97d864545246cf7f16acd742a6 149 Pfam PF03061 Thioesterase superfamily 33 104 7.2E-19 T 18-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CH53_3887 325b8b97d864545246cf7f16acd742a6 149 Gene3D G3DSA:3.10.129.10 7 145 3.5E-44 T 18-10-2018 CH53_3887 325b8b97d864545246cf7f16acd742a6 149 SUPERFAMILY SSF54637 15 138 1.02E-39 T 18-10-2018 IPR029069 HotDog domain superfamily CH53_4357 6d05180d7510af74d601847fec9aa220 189 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 184 26.007 T 18-10-2018 IPR022929 Putative manganese efflux pump MntP CH53_4357 6d05180d7510af74d601847fec9aa220 189 Pfam PF02659 Putative manganese efflux pump 31 181 3.4E-56 T 18-10-2018 IPR003810 Putative manganese efflux pump CH53_3048 f932735ada8aa5c7a6af2b593ec79cf1 95 SUPERFAMILY SSF54909 1 87 4.13E-25 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_3048 f932735ada8aa5c7a6af2b593ec79cf1 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 4.3E-12 T 18-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CH53_3048 f932735ada8aa5c7a6af2b593ec79cf1 95 Gene3D G3DSA:3.30.70.100 2 94 1.7E-31 T 18-10-2018 CH53_475 b4c7fe34ca5f431f74f11cf3c7d6a05c 312 Pfam PF02470 MlaD protein 48 115 7.0E-12 T 18-10-2018 IPR003399 Mce/MlaD CH53_331 a45e54367a97be6a2d02aa476469a612 527 SUPERFAMILY SSF103473 10 442 4.32E-33 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_331 a45e54367a97be6a2d02aa476469a612 527 Gene3D G3DSA:1.20.1250.20 232 446 1.0E-5 T 18-10-2018 CH53_331 a45e54367a97be6a2d02aa476469a612 527 Pfam PF13347 MFS/sugar transport protein 13 449 1.1E-55 T 18-10-2018 CH53_331 a45e54367a97be6a2d02aa476469a612 527 Gene3D G3DSA:1.20.1250.20 10 219 4.5E-14 T 18-10-2018 CH53_2715 7d82a345d46e61e3b77512cfeb63dfde 149 SUPERFAMILY SSF52218 1 148 1.0E-39 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_2715 7d82a345d46e61e3b77512cfeb63dfde 149 Gene3D G3DSA:3.40.50.360 1 149 1.7E-42 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_2715 7d82a345d46e61e3b77512cfeb63dfde 149 Pfam PF00258 Flavodoxin 6 130 1.2E-21 T 18-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CH53_2715 7d82a345d46e61e3b77512cfeb63dfde 149 PRINTS PR00369 Flavodoxin signature 84 94 5.3E-7 T 18-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CH53_2715 7d82a345d46e61e3b77512cfeb63dfde 149 PRINTS PR00369 Flavodoxin signature 108 127 5.3E-7 T 18-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CH53_2715 7d82a345d46e61e3b77512cfeb63dfde 149 PRINTS PR00369 Flavodoxin signature 53 64 5.3E-7 T 18-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CH53_3907 6c7059a8cc8d5963fa09525d2484204f 83 Gene3D G3DSA:1.10.1900.30 9 77 1.8E-38 T 18-10-2018 IPR038191 YciN superfamily CH53_3907 6c7059a8cc8d5963fa09525d2484204f 83 Pfam PF10692 Protein of unknown function (DUF2498) 5 81 4.5E-44 T 18-10-2018 IPR019633 Protein of unknown function DUF2498 CH53_947 20ec8837e30fcf2203070ddbb8bd2f12 223 Gene3D G3DSA:3.20.20.70 2 223 4.4E-56 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_947 20ec8837e30fcf2203070ddbb8bd2f12 223 SUPERFAMILY SSF102114 24 119 1.96E-6 T 18-10-2018 CH53_947 20ec8837e30fcf2203070ddbb8bd2f12 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 36.515 T 18-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CH53_947 20ec8837e30fcf2203070ddbb8bd2f12 223 PIRSF PIRSF000370 1 223 3.9E-71 T 18-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CH53_947 20ec8837e30fcf2203070ddbb8bd2f12 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 2.3E-111 T 18-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CH53_947 20ec8837e30fcf2203070ddbb8bd2f12 223 Pfam PF04055 Radical SAM superfamily 26 124 1.9E-8 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_947 20ec8837e30fcf2203070ddbb8bd2f12 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 2.4E-13 T 18-10-2018 CH53_2340 c93d048f519bf94022736b83eac1442c 260 SUPERFAMILY SSF53213 5 259 3.14E-90 T 18-10-2018 CH53_2340 c93d048f519bf94022736b83eac1442c 260 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 258 1.2E-31 T 18-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CH53_2340 c93d048f519bf94022736b83eac1442c 260 Gene3D G3DSA:3.40.830.10 1 260 1.7E-92 T 18-10-2018 CH53_2340 c93d048f519bf94022736b83eac1442c 260 PIRSF PIRSF006157 1 260 2.2E-92 T 18-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 CH53_1089 61ac93d8e0bff991a23c32de04820f88 155 Pfam PF05981 CreA protein 24 155 1.6E-58 T 18-10-2018 IPR010292 Uncharacterised protein family CreA CH53_1089 61ac93d8e0bff991a23c32de04820f88 155 PIRSF PIRSF003174 1 155 1.1E-67 T 18-10-2018 IPR010292 Uncharacterised protein family CreA CH53_507 85d2ec11b5495238bd552ee7f2d8f35f 329 Gene3D G3DSA:3.20.20.100 15 329 1.7E-117 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CH53_507 85d2ec11b5495238bd552ee7f2d8f35f 329 SUPERFAMILY SSF51430 13 327 2.1E-86 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CH53_507 85d2ec11b5495238bd552ee7f2d8f35f 329 Pfam PF00248 Aldo/keto reductase family 28 327 1.1E-65 T 18-10-2018 IPR023210 NADP-dependent oxidoreductase domain CH53_554 a4bc35ceadb8ae85f6436b4f6eb47993 83 SUPERFAMILY SSF143120 11 68 2.75E-6 T 18-10-2018 IPR036165 YefM-like superfamily CH53_554 a4bc35ceadb8ae85f6436b4f6eb47993 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 70 2.5E-6 T 18-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CH53_1297 aeed02a49cf6bf6ac0e87905f7f881ed 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.5E-44 T 18-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1297 aeed02a49cf6bf6ac0e87905f7f881ed 103 SUPERFAMILY SSF141091 1 102 2.62E-38 T 18-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1297 aeed02a49cf6bf6ac0e87905f7f881ed 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.193 T 18-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1297 aeed02a49cf6bf6ac0e87905f7f881ed 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 18-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_1297 aeed02a49cf6bf6ac0e87905f7f881ed 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 9.1E-40 T 18-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_3284 8b2d7372065fa23f38a765e50a7e94b6 483 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 74 123 6.0E-8 T 18-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3284 8b2d7372065fa23f38a765e50a7e94b6 483 Pfam PF00361 Proton-conducting membrane transporter 137 417 1.8E-57 T 18-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_3284 8b2d7372065fa23f38a765e50a7e94b6 483 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 3.8E-30 T 18-10-2018 CH53_3284 8b2d7372065fa23f38a765e50a7e94b6 483 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 3.8E-30 T 18-10-2018 CH53_3284 8b2d7372065fa23f38a765e50a7e94b6 483 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 3.8E-30 T 18-10-2018 CH53_3284 8b2d7372065fa23f38a765e50a7e94b6 483 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 242 268 3.8E-30 T 18-10-2018 CH53_3284 8b2d7372065fa23f38a765e50a7e94b6 483 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 311 323 3.8E-30 T 18-10-2018 CH53_3284 8b2d7372065fa23f38a765e50a7e94b6 483 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 3.8E-30 T 18-10-2018 CH53_4051 f5eb6a71660c4b4074eb36624d636042 235 Pfam PF00246 Zinc carboxypeptidase 72 157 3.1E-11 T 18-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CH53_4051 f5eb6a71660c4b4074eb36624d636042 235 SUPERFAMILY SSF53187 19 214 2.25E-33 T 18-10-2018 CH53_4051 f5eb6a71660c4b4074eb36624d636042 235 Gene3D G3DSA:3.40.630.10 2 235 1.2E-55 T 18-10-2018 CH53_3572 de5e3b27f6a64cfe6ae227fb1ad82b20 242 PRINTS PR01003 Flagellar assembly protein FliH signature 170 197 1.8E-68 T 18-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CH53_3572 de5e3b27f6a64cfe6ae227fb1ad82b20 242 PRINTS PR01003 Flagellar assembly protein FliH signature 109 128 1.8E-68 T 18-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CH53_3572 de5e3b27f6a64cfe6ae227fb1ad82b20 242 PRINTS PR01003 Flagellar assembly protein FliH signature 129 146 1.8E-68 T 18-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CH53_3572 de5e3b27f6a64cfe6ae227fb1ad82b20 242 PRINTS PR01003 Flagellar assembly protein FliH signature 147 169 1.8E-68 T 18-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CH53_3572 de5e3b27f6a64cfe6ae227fb1ad82b20 242 PRINTS PR01003 Flagellar assembly protein FliH signature 90 108 1.8E-68 T 18-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CH53_3572 de5e3b27f6a64cfe6ae227fb1ad82b20 242 PRINTS PR01003 Flagellar assembly protein FliH signature 198 214 1.8E-68 T 18-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CH53_3572 de5e3b27f6a64cfe6ae227fb1ad82b20 242 PRINTS PR01003 Flagellar assembly protein FliH signature 215 240 1.8E-68 T 18-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CH53_3572 de5e3b27f6a64cfe6ae227fb1ad82b20 242 PRINTS PR01003 Flagellar assembly protein FliH signature 8 27 1.8E-68 T 18-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CH53_3572 de5e3b27f6a64cfe6ae227fb1ad82b20 242 Pfam PF02108 Flagellar assembly protein FliH 110 233 5.9E-38 T 18-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CH53_3280 04fd8686202bc8286c0fa81e03366572 184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_3280 04fd8686202bc8286c0fa81e03366572 184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_3280 04fd8686202bc8286c0fa81e03366572 184 Pfam PF12838 4Fe-4S dicluster domain 39 89 1.2E-12 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_3280 04fd8686202bc8286c0fa81e03366572 184 Gene3D G3DSA:3.30.70.3270 18 151 1.0E-26 T 18-10-2018 CH53_3280 04fd8686202bc8286c0fa81e03366572 184 SUPERFAMILY SSF54862 18 119 7.11E-24 T 18-10-2018 CH53_1763 06fbc92a3d3b1e7e9a5271564b5e0c73 647 SUPERFAMILY SSF48239 374 507 3.31E-9 T 18-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CH53_1763 06fbc92a3d3b1e7e9a5271564b5e0c73 647 Gene3D G3DSA:1.50.10.20 361 507 6.6E-7 T 18-10-2018 CH53_1746 37082b1b34403f6f76036345083248c0 442 PIRSF PIRSF005353 3 442 2.5E-178 T 18-10-2018 IPR026033 Purine permease PbuG-like CH53_1746 37082b1b34403f6f76036345083248c0 442 Pfam PF00860 Permease family 29 402 1.6E-44 T 18-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CH53_2343 ab7fb5a938f293c7168d833d700be192 493 Pfam PF02321 Outer membrane efflux protein 234 424 1.0E-35 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CH53_2343 ab7fb5a938f293c7168d833d700be192 493 Pfam PF02321 Outer membrane efflux protein 25 210 5.0E-28 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CH53_2343 ab7fb5a938f293c7168d833d700be192 493 Gene3D G3DSA:1.20.1600.10 23 447 8.6E-148 T 18-10-2018 CH53_2343 ab7fb5a938f293c7168d833d700be192 493 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 439 9.4E-132 T 18-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 CH53_2343 ab7fb5a938f293c7168d833d700be192 493 SUPERFAMILY SSF56954 25 442 6.67E-96 T 18-10-2018 CH53_4005 6fcb290f9619d9a0f44b4bebfa3aa02f 275 Pfam PF07313 Protein of unknown function (DUF1460) 59 256 4.0E-73 T 18-10-2018 IPR010846 Protein of unknown function DUF1460 CH53_4005 6fcb290f9619d9a0f44b4bebfa3aa02f 275 Gene3D G3DSA:2.30.260.10 162 269 1.4E-20 T 18-10-2018 CH53_4005 6fcb290f9619d9a0f44b4bebfa3aa02f 275 SUPERFAMILY SSF54001 29 266 1.77E-76 T 18-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CH53_4005 6fcb290f9619d9a0f44b4bebfa3aa02f 275 Gene3D G3DSA:1.10.3670.10 25 138 1.7E-18 T 18-10-2018 CH53_4350 c7ee0a50a3481769389149a215fb6684 183 ProSitePatterns PS01293 Nudix CoA signature. 40 60 - T 18-10-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918|Reactome: R-HSA-9033241 CH53_4350 c7ee0a50a3481769389149a215fb6684 183 Pfam PF00293 NUDIX domain 23 136 3.5E-13 T 18-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CH53_4350 c7ee0a50a3481769389149a215fb6684 183 SUPERFAMILY SSF55811 4 174 1.35E-32 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CH53_4350 c7ee0a50a3481769389149a215fb6684 183 Hamap MF_01592 Uncharacterized Nudix hydrolase NudL [nudL]. 1 183 49.812 T 18-10-2018 IPR023735 Uncharacterised nudix hydrolase NudL GO:0016818 CH53_4350 c7ee0a50a3481769389149a215fb6684 183 Gene3D G3DSA:3.90.79.10 9 182 3.4E-46 T 18-10-2018 CH53_2490 8528c16c192104fece2a0f824bc2d684 241 Pfam PF07103 Protein of unknown function (DUF1365) 5 234 1.9E-73 T 18-10-2018 IPR010775 Protein of unknown function DUF1365 CH53_3382 c09a92639598ea9a00ab2fa383ac3386 264 PIRSF PIRSF033579 1 264 6.4E-100 T 18-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CH53_3382 c09a92639598ea9a00ab2fa383ac3386 264 Pfam PF06180 Cobalt chelatase (CbiK) 3 256 9.2E-96 T 18-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CH53_3382 c09a92639598ea9a00ab2fa383ac3386 264 SUPERFAMILY SSF53800 2 257 5.23E-84 T 18-10-2018 CH53_3382 c09a92639598ea9a00ab2fa383ac3386 264 Gene3D G3DSA:3.40.50.1400 114 236 8.0E-98 T 18-10-2018 CH53_3382 c09a92639598ea9a00ab2fa383ac3386 264 Gene3D G3DSA:3.40.50.1400 3 255 8.0E-98 T 18-10-2018 CH53_4083 640380f90dc98213ade814175aac16c4 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 1.3E-7 T 18-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CH53_3084 5ed168e7455ce90755b05e808853dd6a 98 SMART SM00530 38 92 1.2E-4 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_3084 5ed168e7455ce90755b05e808853dd6a 98 SUPERFAMILY SSF47413 39 85 9.98E-11 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_3084 5ed168e7455ce90755b05e808853dd6a 98 Gene3D G3DSA:1.10.260.40 2 96 4.4E-17 T 18-10-2018 CH53_3084 5ed168e7455ce90755b05e808853dd6a 98 Pfam PF01381 Helix-turn-helix 40 82 3.1E-7 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_1752 a400458deca0240d7e32146c09634a29 240 PIRSF PIRSF003107 7 226 4.6E-69 T 18-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CH53_1752 a400458deca0240d7e32146c09634a29 240 SUPERFAMILY SSF109755 13 230 2.83E-71 T 18-10-2018 CH53_1752 a400458deca0240d7e32146c09634a29 240 Gene3D G3DSA:1.20.58.220 118 236 5.1E-33 T 18-10-2018 IPR038078 PhoU-like domain superfamily CH53_1752 a400458deca0240d7e32146c09634a29 240 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 1.3E-74 T 18-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CH53_1752 a400458deca0240d7e32146c09634a29 240 Pfam PF01895 PhoU domain 26 111 4.5E-22 T 18-10-2018 IPR026022 PhoU domain CH53_1752 a400458deca0240d7e32146c09634a29 240 Pfam PF01895 PhoU domain 128 212 4.8E-17 T 18-10-2018 IPR026022 PhoU domain CH53_1752 a400458deca0240d7e32146c09634a29 240 Gene3D G3DSA:1.20.58.220 1 116 1.2E-42 T 18-10-2018 IPR038078 PhoU-like domain superfamily CH53_814 53384172550ec2865f55efccd9b1dc60 142 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 10 109 4.0E-4 T 18-10-2018 IPR020143 Uncharacterised protein family, RP436 CH53_814 53384172550ec2865f55efccd9b1dc60 142 Pfam PF09335 SNARE associated Golgi protein 26 133 4.6E-8 T 18-10-2018 IPR032816 SNARE associated Golgi protein CH53_2740 69070a4373f9b6f8a09ab4dc83f4ad17 104 PRINTS PR00605 Class IC cytochrome C signature 77 99 2.6E-5 T 18-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CH53_2740 69070a4373f9b6f8a09ab4dc83f4ad17 104 PRINTS PR00605 Class IC cytochrome C signature 32 43 2.6E-5 T 18-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CH53_2740 69070a4373f9b6f8a09ab4dc83f4ad17 104 SUPERFAMILY SSF46626 8 103 3.87E-21 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CH53_2740 69070a4373f9b6f8a09ab4dc83f4ad17 104 Pfam PF00034 Cytochrome c 32 103 5.9E-8 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2740 69070a4373f9b6f8a09ab4dc83f4ad17 104 Gene3D G3DSA:1.10.760.10 21 104 1.6E-25 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CH53_4292 a84d49b6782a5695843587fc91bf2046 281 SUPERFAMILY SSF103481 38 135 3.79E-12 T 18-10-2018 CH53_4292 a84d49b6782a5695843587fc91bf2046 281 Pfam PF00892 EamA-like transporter family 145 278 1.1E-12 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_4292 a84d49b6782a5695843587fc91bf2046 281 SUPERFAMILY SSF103481 179 279 1.44E-14 T 18-10-2018 CH53_4413 29dda4477e1a259d1e2cc6bb0af0ecb2 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_4413 29dda4477e1a259d1e2cc6bb0af0ecb2 234 SMART SM00382 35 223 2.6E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_4413 29dda4477e1a259d1e2cc6bb0af0ecb2 234 SUPERFAMILY SSF52540 6 227 1.23E-67 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_4413 29dda4477e1a259d1e2cc6bb0af0ecb2 234 Gene3D G3DSA:3.40.50.300 4 230 2.0E-65 T 18-10-2018 CH53_4413 29dda4477e1a259d1e2cc6bb0af0ecb2 234 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 225 3.8E-109 T 18-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 CH53_4413 29dda4477e1a259d1e2cc6bb0af0ecb2 234 Pfam PF00005 ABC transporter 26 174 2.4E-36 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2750 ae4c4c98bf2e6a8513a756dce26edde8 217 Gene3D G3DSA:1.10.3720.10 1 217 4.1E-61 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2750 ae4c4c98bf2e6a8513a756dce26edde8 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 214 1.5E-21 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_2750 ae4c4c98bf2e6a8513a756dce26edde8 217 SUPERFAMILY SSF161098 10 201 8.5E-48 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2901 64c194f2cf6696c7b5d82ed01e5263bc 110 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 99 22.764 T 18-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CH53_2901 64c194f2cf6696c7b5d82ed01e5263bc 110 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 4.9E-35 T 18-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CH53_2901 64c194f2cf6696c7b5d82ed01e5263bc 110 PIRSF PIRSF004555 3 110 1.5E-39 T 18-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CH53_2901 64c194f2cf6696c7b5d82ed01e5263bc 110 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 106 3.1E-41 T 18-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CH53_2901 64c194f2cf6696c7b5d82ed01e5263bc 110 Gene3D G3DSA:3.30.1310.10 1 110 8.0E-47 T 18-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CH53_2901 64c194f2cf6696c7b5d82ed01e5263bc 110 SUPERFAMILY SSF82607 11 104 1.44E-34 T 18-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CH53_2486 011daead96c376f7369d0272c6d7b866 257 Pfam PF13411 MerR HTH family regulatory protein 4 71 4.0E-19 T 18-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CH53_2486 011daead96c376f7369d0272c6d7b866 257 SMART SM00422 4 73 9.1E-28 T 18-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CH53_2486 011daead96c376f7369d0272c6d7b866 257 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 18-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CH53_2486 011daead96c376f7369d0272c6d7b866 257 Gene3D G3DSA:1.10.1660.10 1 71 7.3E-25 T 18-10-2018 CH53_2486 011daead96c376f7369d0272c6d7b866 257 SUPERFAMILY SSF46955 4 89 1.42E-20 T 18-10-2018 IPR009061 Putative DNA-binding domain superfamily CH53_2776 783526f151db4b62bf04ba88caaa4f76 229 Gene3D G3DSA:3.40.50.1000 5 206 4.1E-70 T 18-10-2018 IPR023214 HAD superfamily CH53_2776 783526f151db4b62bf04ba88caaa4f76 229 SUPERFAMILY SSF56784 1 222 6.2E-54 T 18-10-2018 IPR036412 HAD-like superfamily CH53_2776 783526f151db4b62bf04ba88caaa4f76 229 Gene3D G3DSA:1.10.720.60 16 99 4.1E-70 T 18-10-2018 CH53_2776 783526f151db4b62bf04ba88caaa4f76 229 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 1 222 40.516 T 18-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 CH53_2776 783526f151db4b62bf04ba88caaa4f76 229 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 222 4.6E-86 T 18-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 CH53_1420 5ca09045622bfc6f7373257152524632 107 TIGRFAM TIGR02498 type_III_ssaH: type III secretion system protein, SsaH family 5 82 6.5E-32 T 18-10-2018 IPR010437 Type III secretion system SsaH CH53_1420 5ca09045622bfc6f7373257152524632 107 Pfam PF06287 Protein of unknown function (DUF1039) 17 81 4.4E-28 T 18-10-2018 IPR010437 Type III secretion system SsaH CH53_1861 708801d485d4f12ae848d645f48b4f28 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 3.5E-58 T 18-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CH53_1861 708801d485d4f12ae848d645f48b4f28 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.5E-47 T 18-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CH53_1861 708801d485d4f12ae848d645f48b4f28 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.5E-47 T 18-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CH53_1861 708801d485d4f12ae848d645f48b4f28 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.5E-47 T 18-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CH53_1861 708801d485d4f12ae848d645f48b4f28 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.5E-47 T 18-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CH53_1861 708801d485d4f12ae848d645f48b4f28 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.5E-47 T 18-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CH53_1861 708801d485d4f12ae848d645f48b4f28 159 Pfam PF01467 Cytidylyltransferase-like 6 134 2.0E-23 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CH53_1861 708801d485d4f12ae848d645f48b4f28 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 59 4.7E-16 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CH53_1861 708801d485d4f12ae848d645f48b4f28 159 SUPERFAMILY SSF52374 3 155 9.12E-44 T 18-10-2018 CH53_1861 708801d485d4f12ae848d645f48b4f28 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.432 T 18-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CH53_1861 708801d485d4f12ae848d645f48b4f28 159 Gene3D G3DSA:3.40.50.620 1 159 8.9E-56 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_3716 f7a93f1879021cda99e7aef10f7dbaa3 822 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 17 822 0.0 T 18-10-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:1901515 CH53_3716 f7a93f1879021cda99e7aef10f7dbaa3 822 SUPERFAMILY SSF48452 91 223 3.57E-10 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_3716 f7a93f1879021cda99e7aef10f7dbaa3 822 Gene3D G3DSA:1.25.40.10 78 249 9.0E-12 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CH53_3509 5dfba1ca8b8c47fb4c0ddf3128ce4581 156 SUPERFAMILY SSF55961 4 139 1.28E-17 T 18-10-2018 CH53_3509 5dfba1ca8b8c47fb4c0ddf3128ce4581 156 Gene3D G3DSA:3.30.530.20 1 154 1.1E-10 T 18-10-2018 IPR023393 START-like domain superfamily CH53_3139 2faa347fd8513780f5bf63d23c1ed77c 115 SUPERFAMILY SSF81343 5 114 5.23E-29 T 18-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_3139 2faa347fd8513780f5bf63d23c1ed77c 115 Gene3D G3DSA:1.20.1300.10 1 115 1.5E-30 T 18-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CH53_3139 2faa347fd8513780f5bf63d23c1ed77c 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 5.5E-36 T 18-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CH53_3139 2faa347fd8513780f5bf63d23c1ed77c 115 PIRSF PIRSF000169 1 115 2.4E-41 T 18-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CH53_2551 be2944d4afa2738c45d6277484a4e7d9 179 Gene3D G3DSA:2.60.40.4150 29 178 1.8E-27 T 18-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily CH53_2551 be2944d4afa2738c45d6277484a4e7d9 179 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 22 145 4.0E-30 T 18-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN CH53_2551 be2944d4afa2738c45d6277484a4e7d9 179 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 13 146 2.9E-40 T 18-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN CH53_648 75cb41c1dee8b3244196eb0bc0919ac4 257 SUPERFAMILY SSF75217 3 174 3.27E-39 T 18-10-2018 IPR029028 Alpha/beta knot methyltransferases CH53_648 75cb41c1dee8b3244196eb0bc0919ac4 257 Pfam PF00588 SpoU rRNA Methylase family 5 154 3.0E-34 T 18-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CH53_648 75cb41c1dee8b3244196eb0bc0919ac4 257 Gene3D G3DSA:1.10.8.590 168 251 8.2E-33 T 18-10-2018 CH53_648 75cb41c1dee8b3244196eb0bc0919ac4 257 Gene3D G3DSA:3.40.1280.10 1 164 3.4E-66 T 18-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH53_648 75cb41c1dee8b3244196eb0bc0919ac4 257 PIRSF PIRSF004808 1 246 1.2E-77 T 18-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 CH53_648 75cb41c1dee8b3244196eb0bc0919ac4 257 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 240 1.0E-87 T 18-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 CH53_3920 e3618552b2c383a67890eeb8300be588 71 Pfam PF05433 Glycine zipper 2TM domain 34 69 2.0E-7 T 18-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CH53_4424 4d4cabe5ff3fff7e55b60fee83257393 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 1.4E-83 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_4424 4d4cabe5ff3fff7e55b60fee83257393 477 Gene3D G3DSA:3.30.1360.60 397 477 5.3E-31 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_4424 4d4cabe5ff3fff7e55b60fee83257393 477 SUPERFAMILY SSF55604 401 474 1.83E-20 T 18-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CH53_4424 4d4cabe5ff3fff7e55b60fee83257393 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 1.1E-87 T 18-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CH53_4424 4d4cabe5ff3fff7e55b60fee83257393 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_4424 4d4cabe5ff3fff7e55b60fee83257393 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 3.6E-24 T 18-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CH53_4424 4d4cabe5ff3fff7e55b60fee83257393 477 Pfam PF00367 phosphotransferase system, EIIB 405 436 8.2E-14 T 18-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CH53_4424 4d4cabe5ff3fff7e55b60fee83257393 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 2.0E-228 T 18-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 CH53_2788 f6e85f49b966a63a465182245b09e4d1 413 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 1.4E-194 T 18-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 CH53_2788 f6e85f49b966a63a465182245b09e4d1 413 PIRSF PIRSF016055 1 413 1.3E-198 T 18-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 CH53_2788 f6e85f49b966a63a465182245b09e4d1 413 Pfam PF03116 NQR2, RnfD, RnfE family 43 405 1.7E-107 T 18-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 CH53_2788 f6e85f49b966a63a465182245b09e4d1 413 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.725 T 18-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 CH53_2886 d83b2f0bcef11fdb44881e767d51107f 292 Gene3D G3DSA:3.40.50.1980 23 163 1.2E-40 T 18-10-2018 CH53_2886 d83b2f0bcef11fdb44881e767d51107f 292 PRINTS PR00691 Adhesin B signature 23 44 2.6E-21 T 18-10-2018 IPR006129 Adhesin B GO:0007155 CH53_2886 d83b2f0bcef11fdb44881e767d51107f 292 PRINTS PR00691 Adhesin B signature 270 288 2.6E-21 T 18-10-2018 IPR006129 Adhesin B GO:0007155 CH53_2886 d83b2f0bcef11fdb44881e767d51107f 292 PRINTS PR00691 Adhesin B signature 48 66 2.6E-21 T 18-10-2018 IPR006129 Adhesin B GO:0007155 CH53_2886 d83b2f0bcef11fdb44881e767d51107f 292 PRINTS PR00691 Adhesin B signature 227 244 2.6E-21 T 18-10-2018 IPR006129 Adhesin B GO:0007155 CH53_2886 d83b2f0bcef11fdb44881e767d51107f 292 PRINTS PR00691 Adhesin B signature 67 86 2.6E-21 T 18-10-2018 IPR006129 Adhesin B GO:0007155 CH53_2886 d83b2f0bcef11fdb44881e767d51107f 292 PRINTS PR00691 Adhesin B signature 178 195 2.6E-21 T 18-10-2018 IPR006129 Adhesin B GO:0007155 CH53_2886 d83b2f0bcef11fdb44881e767d51107f 292 SUPERFAMILY SSF53807 20 292 2.06E-81 T 18-10-2018 CH53_2886 d83b2f0bcef11fdb44881e767d51107f 292 PRINTS PR00690 Adhesin family signature 231 249 3.1E-27 T 18-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CH53_2886 d83b2f0bcef11fdb44881e767d51107f 292 PRINTS PR00690 Adhesin family signature 257 276 3.1E-27 T 18-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CH53_2886 d83b2f0bcef11fdb44881e767d51107f 292 PRINTS PR00690 Adhesin family signature 67 84 3.1E-27 T 18-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CH53_2886 d83b2f0bcef11fdb44881e767d51107f 292 PRINTS PR00690 Adhesin family signature 54 67 3.1E-27 T 18-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CH53_2886 d83b2f0bcef11fdb44881e767d51107f 292 PRINTS PR00690 Adhesin family signature 23 41 3.1E-27 T 18-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CH53_2886 d83b2f0bcef11fdb44881e767d51107f 292 PRINTS PR00690 Adhesin family signature 178 199 3.1E-27 T 18-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CH53_2886 d83b2f0bcef11fdb44881e767d51107f 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 27 288 2.5E-76 T 18-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CH53_2886 d83b2f0bcef11fdb44881e767d51107f 292 Gene3D G3DSA:3.40.50.1980 164 292 1.9E-42 T 18-10-2018 CH53_3053 1339ef21ff0a5081bfdbd21af9627c3e 159 Pfam PF00313 'Cold-shock' DNA-binding domain 1 61 6.6E-10 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CH53_3053 1339ef21ff0a5081bfdbd21af9627c3e 159 SUPERFAMILY SSF50249 2 62 1.05E-10 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold CH53_3053 1339ef21ff0a5081bfdbd21af9627c3e 159 Gene3D G3DSA:2.40.50.140 1 68 5.5E-18 T 18-10-2018 CH53_2818 cc6bdae6da6ccc1a37a138d057259aa3 304 Pfam PF00480 ROK family 3 300 1.6E-85 T 18-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CH53_2818 cc6bdae6da6ccc1a37a138d057259aa3 304 SUPERFAMILY SSF53067 2 299 5.34E-59 T 18-10-2018 CH53_2818 cc6bdae6da6ccc1a37a138d057259aa3 304 Gene3D G3DSA:3.30.420.40 119 289 1.4E-79 T 18-10-2018 CH53_2818 cc6bdae6da6ccc1a37a138d057259aa3 304 ProSitePatterns PS01125 ROK family signature. 130 157 - T 18-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CH53_2818 cc6bdae6da6ccc1a37a138d057259aa3 304 Gene3D G3DSA:3.30.420.40 4 296 1.4E-79 T 18-10-2018 CH53_727 73dae5151be4f2b246f8c5e14750a5d8 228 Gene3D G3DSA:1.10.4190.10 2 204 3.3E-42 T 18-10-2018 IPR038277 UreF domain superfamily CH53_727 73dae5151be4f2b246f8c5e14750a5d8 228 Pfam PF01730 UreF 37 185 1.5E-22 T 18-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CH53_727 73dae5151be4f2b246f8c5e14750a5d8 228 PIRSF PIRSF009467 2 228 3.4E-58 T 18-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CH53_727 73dae5151be4f2b246f8c5e14750a5d8 228 Hamap MF_01385 Urease accessory protein UreF [ureF]. 5 228 21.983 T 18-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CH53_4284 8e8ecfaa03cd124b83cd09331482db82 129 SUPERFAMILY SSF88697 3 127 5.72E-43 T 18-10-2018 IPR015947 PUA-like superfamily CH53_4284 8e8ecfaa03cd124b83cd09331482db82 129 SMART SM01022 14 127 6.3E-35 T 18-10-2018 IPR007374 ASCH domain CH53_4284 8e8ecfaa03cd124b83cd09331482db82 129 Pfam PF04266 ASCH domain 19 126 1.2E-21 T 18-10-2018 IPR007374 ASCH domain CH53_4284 8e8ecfaa03cd124b83cd09331482db82 129 PIRSF PIRSF021320 1 129 2.8E-41 T 18-10-2018 IPR009326 Protein of unknown function DUF984 CH53_4284 8e8ecfaa03cd124b83cd09331482db82 129 Gene3D G3DSA:3.10.400.10 1 129 3.7E-42 T 18-10-2018 CH53_2283 8e2371c1bd1e6c9cd719697bd6ea9d20 297 Gene3D G3DSA:3.40.190.10 94 293 2.2E-54 T 18-10-2018 CH53_2283 8e2371c1bd1e6c9cd719697bd6ea9d20 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 7.0E-20 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2283 8e2371c1bd1e6c9cd719697bd6ea9d20 297 SUPERFAMILY SSF46785 4 85 8.17E-21 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2283 8e2371c1bd1e6c9cd719697bd6ea9d20 297 Gene3D G3DSA:3.40.190.10 166 269 2.2E-54 T 18-10-2018 CH53_2283 8e2371c1bd1e6c9cd719697bd6ea9d20 297 Pfam PF03466 LysR substrate binding domain 90 294 6.4E-41 T 18-10-2018 IPR005119 LysR, substrate-binding CH53_2283 8e2371c1bd1e6c9cd719697bd6ea9d20 297 Gene3D G3DSA:1.10.10.10 5 93 6.1E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2283 8e2371c1bd1e6c9cd719697bd6ea9d20 297 SUPERFAMILY SSF53850 92 294 4.16E-43 T 18-10-2018 CH53_2283 8e2371c1bd1e6c9cd719697bd6ea9d20 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.9E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2283 8e2371c1bd1e6c9cd719697bd6ea9d20 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.9E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_2283 8e2371c1bd1e6c9cd719697bd6ea9d20 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.9E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_4366 fd22ff0ec19c94777f965a03a38e6aff 463 PIRSF PIRSF006060 1 461 1.2E-76 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_4366 fd22ff0ec19c94777f965a03a38e6aff 463 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 18-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CH53_4366 fd22ff0ec19c94777f965a03a38e6aff 463 Pfam PF00324 Amino acid permease 18 452 2.9E-118 T 18-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CH53_4366 fd22ff0ec19c94777f965a03a38e6aff 463 Gene3D G3DSA:1.20.1740.10 9 461 1.6E-61 T 18-10-2018 CH53_1270 f03910cd6beb3af8b8655f4a165dfab9 331 Pfam PF01136 Peptidase family U32 76 330 3.6E-66 T 18-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CH53_1270 f03910cd6beb3af8b8655f4a165dfab9 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 18-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CH53_1270 f03910cd6beb3af8b8655f4a165dfab9 331 SUPERFAMILY SSF51391 11 160 3.66E-5 T 18-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CH53_1965 a379e15b89128f0dd5dbd1bf947f35f6 93 Gene3D G3DSA:3.10.50.40 2 93 9.9E-38 T 18-10-2018 CH53_1965 a379e15b89128f0dd5dbd1bf947f35f6 93 SUPERFAMILY SSF54534 4 90 9.16E-31 T 18-10-2018 CH53_1965 a379e15b89128f0dd5dbd1bf947f35f6 93 Pfam PF13616 PPIC-type PPIASE domain 15 90 6.6E-25 T 18-10-2018 CH53_2040 ae5d53265100c9d0bbc5942a94d88685 215 Gene3D G3DSA:2.60.40.10 19 142 2.0E-19 T 18-10-2018 IPR013783 Immunoglobulin-like fold CH53_12 a8fd7f02deddb9ed1c9b85e909022048 196 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 184 5.8E-53 T 18-10-2018 IPR003697 Maf-like protein GO:0047429 CH53_12 a8fd7f02deddb9ed1c9b85e909022048 196 SUPERFAMILY SSF52972 2 186 5.95E-56 T 18-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CH53_12 a8fd7f02deddb9ed1c9b85e909022048 196 Gene3D G3DSA:3.90.950.10 3 194 6.2E-57 T 18-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CH53_12 a8fd7f02deddb9ed1c9b85e909022048 196 Pfam PF02545 Maf-like protein 3 185 1.9E-42 T 18-10-2018 IPR003697 Maf-like protein GO:0047429 CH53_12 a8fd7f02deddb9ed1c9b85e909022048 196 PIRSF PIRSF006305 1 192 5.3E-37 T 18-10-2018 IPR003697 Maf-like protein GO:0047429 CH53_12 a8fd7f02deddb9ed1c9b85e909022048 196 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 28.035 T 18-10-2018 IPR003697 Maf-like protein GO:0047429 CH53_274 dca3ca7f16e5192929d6cafbeea828e1 244 Pfam PF00194 Eukaryotic-type carbonic anhydrase 24 242 1.9E-49 T 18-10-2018 IPR001148 Alpha carbonic anhydrase domain CH53_274 dca3ca7f16e5192929d6cafbeea828e1 244 Gene3D G3DSA:3.10.200.10 17 244 3.8E-82 T 18-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily CH53_274 dca3ca7f16e5192929d6cafbeea828e1 244 SUPERFAMILY SSF51069 24 242 1.67E-76 T 18-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily CH53_274 dca3ca7f16e5192929d6cafbeea828e1 244 SMART SM01057 25 243 1.4E-100 T 18-10-2018 IPR001148 Alpha carbonic anhydrase domain CH53_274 dca3ca7f16e5192929d6cafbeea828e1 244 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 114 130 - T 18-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 CH53_3198 a713b7fd2f21c2b9f4f45c639722658c 368 Pfam PF12698 ABC-2 family transporter protein 25 355 1.5E-49 T 18-10-2018 CH53_3198 a713b7fd2f21c2b9f4f45c639722658c 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 1.4E-6 T 18-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CH53_3198 a713b7fd2f21c2b9f4f45c639722658c 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 1.4E-6 T 18-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CH53_3198 a713b7fd2f21c2b9f4f45c639722658c 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 1.4E-6 T 18-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CH53_2769 a4ad45206698da0ad86d1e2828d94e93 400 Gene3D G3DSA:1.20.1250.20 11 385 2.1E-47 T 18-10-2018 CH53_2769 a4ad45206698da0ad86d1e2828d94e93 400 Pfam PF07690 Major Facilitator Superfamily 20 296 1.3E-32 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_2769 a4ad45206698da0ad86d1e2828d94e93 400 SUPERFAMILY SSF103473 9 390 4.71E-55 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_3494 85e60ed3545d1c7621a3ed65f941e76d 467 Gene3D G3DSA:3.30.930.30 2 193 5.2E-62 T 18-10-2018 CH53_3494 85e60ed3545d1c7621a3ed65f941e76d 467 Pfam PF03389 MobA/MobL family 17 196 1.4E-52 T 18-10-2018 IPR005053 MobA/MobL protein CH53_1240 fb927ede4a21e3d72dc5e29e390a2cc9 167 Gene3D G3DSA:3.40.630.30 16 153 6.5E-26 T 18-10-2018 CH53_1240 fb927ede4a21e3d72dc5e29e390a2cc9 167 SUPERFAMILY SSF55729 9 167 1.89E-30 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_1240 fb927ede4a21e3d72dc5e29e390a2cc9 167 Pfam PF00583 Acetyltransferase (GNAT) family 43 144 5.1E-15 T 18-10-2018 IPR000182 GNAT domain CH53_1040 4bb7350cfb402b1faeb66ea549424ebe 466 Gene3D G3DSA:3.40.640.10 58 319 1.5E-208 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CH53_1040 4bb7350cfb402b1faeb66ea549424ebe 466 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 2 465 3.1E-261 T 18-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 CH53_1040 4bb7350cfb402b1faeb66ea549424ebe 466 Gene3D G3DSA:3.90.1150.10 6 460 1.5E-208 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CH53_1040 4bb7350cfb402b1faeb66ea549424ebe 466 Pfam PF01212 Beta-eliminating lyase 46 431 1.8E-97 T 18-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CH53_1040 4bb7350cfb402b1faeb66ea549424ebe 466 Hamap MF_00544 Tryptophanase [tnaA]. 1 465 104.645 T 18-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 CH53_1040 4bb7350cfb402b1faeb66ea549424ebe 466 SUPERFAMILY SSF53383 2 465 4.75E-146 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CH53_1040 4bb7350cfb402b1faeb66ea549424ebe 466 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 255 273 - T 18-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 CH53_1040 4bb7350cfb402b1faeb66ea549424ebe 466 PIRSF PIRSF001386 1 466 1.5E-224 T 18-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 CH53_4236 5117aa6885b7824e5b26492ee93ab373 368 Gene3D G3DSA:3.40.50.2300 156 344 3.8E-15 T 18-10-2018 CH53_4236 5117aa6885b7824e5b26492ee93ab373 368 Pfam PF13407 Periplasmic binding protein domain 61 308 1.7E-26 T 18-10-2018 IPR025997 Periplasmic binding protein CH53_4236 5117aa6885b7824e5b26492ee93ab373 368 SUPERFAMILY SSF53822 58 341 2.06E-37 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_4236 5117aa6885b7824e5b26492ee93ab373 368 Gene3D G3DSA:3.40.50.2300 54 145 2.8E-15 T 18-10-2018 CH53_2726 d8eae4eac1c7ab84a2ac296cbf4ae532 282 Pfam PF01148 Cytidylyltransferase family 4 279 1.8E-69 T 18-10-2018 CH53_2726 d8eae4eac1c7ab84a2ac296cbf4ae532 282 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 18-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 CH53_3790 aee5d07b6160521496b8a868a4b78006 254 Gene3D G3DSA:3.20.20.380 1 250 2.9E-87 T 18-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 CH53_3790 aee5d07b6160521496b8a868a4b78006 254 Pfam PF03932 CutC family 3 201 7.6E-72 T 18-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 CH53_3790 aee5d07b6160521496b8a868a4b78006 254 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 204 27.924 T 18-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 CH53_3790 aee5d07b6160521496b8a868a4b78006 254 SUPERFAMILY SSF110395 3 244 6.67E-74 T 18-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 CH53_2915 04aed8d2c095a5e83340fd43302bc18d 434 SUPERFAMILY SSF53613 36 416 2.65E-43 T 18-10-2018 IPR029056 Ribokinase-like CH53_2915 04aed8d2c095a5e83340fd43302bc18d 434 Pfam PF00294 pfkB family carbohydrate kinase 138 294 6.3E-9 T 18-10-2018 IPR011611 Carbohydrate kinase PfkB CH53_3994 ba309bccc8028dd49da175a73638f566 230 SUPERFAMILY SSF161098 7 205 5.49E-39 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3994 ba309bccc8028dd49da175a73638f566 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 218 7.2E-22 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_3994 ba309bccc8028dd49da175a73638f566 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 114 3.4E-17 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CH53_3994 ba309bccc8028dd49da175a73638f566 230 Gene3D G3DSA:1.10.3720.10 1 221 7.3E-48 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3201 9f1a778f8588d31d9b83a2dc3e1aa6b4 328 Gene3D G3DSA:2.40.50.100 207 241 2.5E-25 T 18-10-2018 CH53_3201 9f1a778f8588d31d9b83a2dc3e1aa6b4 328 Gene3D G3DSA:2.40.30.170 242 321 2.5E-25 T 18-10-2018 CH53_3201 9f1a778f8588d31d9b83a2dc3e1aa6b4 328 SUPERFAMILY SSF111369 41 102 5.75E-8 T 18-10-2018 CH53_3201 9f1a778f8588d31d9b83a2dc3e1aa6b4 328 SUPERFAMILY SSF111369 178 292 1.06E-12 T 18-10-2018 CH53_3201 9f1a778f8588d31d9b83a2dc3e1aa6b4 328 Hamap MF_01304 UPF0194 membrane protein YbhG [ybhG]. 2 328 50.635 T 18-10-2018 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG CH53_3201 9f1a778f8588d31d9b83a2dc3e1aa6b4 328 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 40 319 7.3E-16 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CH53_3201 9f1a778f8588d31d9b83a2dc3e1aa6b4 328 Gene3D G3DSA:2.40.50.100 43 76 2.0E-14 T 18-10-2018 CH53_3201 9f1a778f8588d31d9b83a2dc3e1aa6b4 328 Gene3D G3DSA:1.10.287.470 179 206 2.5E-25 T 18-10-2018 CH53_3201 9f1a778f8588d31d9b83a2dc3e1aa6b4 328 Gene3D G3DSA:1.10.287.470 77 111 2.0E-14 T 18-10-2018 CH53_3201 9f1a778f8588d31d9b83a2dc3e1aa6b4 328 Gene3D G3DSA:1.10.287.470 112 173 5.9E-7 T 18-10-2018 CH53_508 4b3a73426d3f391a66563e2ababc6449 105 Pfam PF10697 Protein of unknown function (DUF2502) 6 93 1.0E-33 T 18-10-2018 IPR019638 Protein of unknown function DUF2502 CH53_2481 5640424b48d1aa2fe95d81046c4c71e9 218 SMART SM01236 73 170 6.3E-9 T 18-10-2018 CH53_2481 5640424b48d1aa2fe95d81046c4c71e9 218 Pfam PF14518 Iron-containing redox enzyme 39 206 6.7E-26 T 18-10-2018 CH53_2481 5640424b48d1aa2fe95d81046c4c71e9 218 SUPERFAMILY SSF48613 1 212 2.09E-59 T 18-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CH53_2481 5640424b48d1aa2fe95d81046c4c71e9 218 Gene3D G3DSA:1.20.910.10 3 218 6.2E-54 T 18-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CH53_2021 ec134c6b7237952e57ad669b132b654b 84 SUPERFAMILY SSF64307 4 80 1.27E-26 T 18-10-2018 IPR036868 TusA-like domain superfamily CH53_2021 ec134c6b7237952e57ad669b132b654b 84 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 29.479 T 18-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 CH53_2021 ec134c6b7237952e57ad669b132b654b 84 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 18-10-2018 IPR001455 TusA-like domain CH53_2021 ec134c6b7237952e57ad669b132b654b 84 Pfam PF01206 Sulfurtransferase TusA 10 79 1.5E-25 T 18-10-2018 IPR001455 TusA-like domain CH53_2021 ec134c6b7237952e57ad669b132b654b 84 Gene3D G3DSA:3.30.110.40 1 81 8.2E-32 T 18-10-2018 IPR036868 TusA-like domain superfamily CH53_4352 d5982c148e39d5920ffa75a805ab3ab1 514 Pfam PF03741 Integral membrane protein TerC family 14 203 1.9E-48 T 18-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 CH53_4352 d5982c148e39d5920ffa75a805ab3ab1 514 Pfam PF03471 Transporter associated domain 431 508 7.8E-18 T 18-10-2018 IPR005170 Transporter-associated domain CH53_4352 d5982c148e39d5920ffa75a805ab3ab1 514 Gene3D G3DSA:3.10.580.10 278 433 1.7E-44 T 18-10-2018 CH53_4352 d5982c148e39d5920ffa75a805ab3ab1 514 Gene3D G3DSA:3.30.465.10 434 509 1.2E-16 T 18-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CH53_4352 d5982c148e39d5920ffa75a805ab3ab1 514 Pfam PF00571 CBS domain 365 416 1.6E-5 T 18-10-2018 IPR000644 CBS domain CH53_4352 d5982c148e39d5920ffa75a805ab3ab1 514 SMART SM01091 428 509 5.4E-22 T 18-10-2018 IPR005170 Transporter-associated domain CH53_4352 d5982c148e39d5920ffa75a805ab3ab1 514 SUPERFAMILY SSF54631 285 419 9.35E-24 T 18-10-2018 CH53_4352 d5982c148e39d5920ffa75a805ab3ab1 514 SUPERFAMILY SSF56176 430 513 3.82E-18 T 18-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CH53_2680 2b8789fcf78fc75e7832fa1f124b3344 346 Pfam PF00248 Aldo/keto reductase family 16 337 6.3E-74 T 18-10-2018 IPR023210 NADP-dependent oxidoreductase domain CH53_2680 2b8789fcf78fc75e7832fa1f124b3344 346 SUPERFAMILY SSF51430 1 344 1.83E-107 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CH53_2680 2b8789fcf78fc75e7832fa1f124b3344 346 Gene3D G3DSA:3.20.20.100 1 346 3.3E-139 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CH53_4016 6288c83d41d43d610730ec89860eaec2 476 ProSitePatterns PS00123 Alkaline phosphatase active site. 126 134 - T 18-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CH53_4016 6288c83d41d43d610730ec89860eaec2 476 SUPERFAMILY SSF53649 43 475 8.9E-133 T 18-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CH53_4016 6288c83d41d43d610730ec89860eaec2 476 Pfam PF00245 Alkaline phosphatase 70 435 5.1E-119 T 18-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CH53_4016 6288c83d41d43d610730ec89860eaec2 476 PRINTS PR00113 Alkaline phosphatase signature 69 89 1.1E-48 T 18-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CH53_4016 6288c83d41d43d610730ec89860eaec2 476 PRINTS PR00113 Alkaline phosphatase signature 163 183 1.1E-48 T 18-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CH53_4016 6288c83d41d43d610730ec89860eaec2 476 PRINTS PR00113 Alkaline phosphatase signature 126 141 1.1E-48 T 18-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CH53_4016 6288c83d41d43d610730ec89860eaec2 476 PRINTS PR00113 Alkaline phosphatase signature 325 354 1.1E-48 T 18-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CH53_4016 6288c83d41d43d610730ec89860eaec2 476 PRINTS PR00113 Alkaline phosphatase signature 226 236 1.1E-48 T 18-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CH53_4016 6288c83d41d43d610730ec89860eaec2 476 Gene3D G3DSA:3.40.720.10 30 476 5.7E-147 T 18-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CH53_4016 6288c83d41d43d610730ec89860eaec2 476 SMART SM00098 70 476 1.4E-187 T 18-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CH53_2369 57cfe6df91d52862095c60def2f0f351 297 Gene3D G3DSA:1.10.10.60 187 295 7.0E-28 T 18-10-2018 CH53_2369 57cfe6df91d52862095c60def2f0f351 297 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 179 6.5E-43 T 18-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal CH53_2369 57cfe6df91d52862095c60def2f0f351 297 SUPERFAMILY SSF46689 191 242 4.12E-9 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_2369 57cfe6df91d52862095c60def2f0f351 297 Pfam PF12833 Helix-turn-helix domain 214 289 1.7E-21 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_2369 57cfe6df91d52862095c60def2f0f351 297 SMART SM00342 208 291 1.4E-26 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_2369 57cfe6df91d52862095c60def2f0f351 297 SUPERFAMILY SSF46689 244 291 1.21E-10 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3986 698b960b57c4007bd3bd87191a4d4ff0 391 SUPERFAMILY SSF46565 249 289 3.27E-5 T 18-10-2018 IPR036869 Chaperone J-domain superfamily CH53_1644 34e23dd12251624fc9535daebf59d8e0 339 SUPERFAMILY SSF161098 89 322 3.11E-22 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1644 34e23dd12251624fc9535daebf59d8e0 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 2.8E-47 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_2596 bdc2dfef565c10f52497e4be139f8708 170 Pfam PF17283 SprT-like zinc ribbon domain 125 165 3.0E-10 T 18-10-2018 IPR035240 SprT-like, zinc ribbon domain CH53_2596 bdc2dfef565c10f52497e4be139f8708 170 SMART SM00731 16 165 1.9E-65 T 18-10-2018 IPR006640 SprT-like CH53_2596 bdc2dfef565c10f52497e4be139f8708 170 Pfam PF10263 SprT-like family 22 119 6.3E-18 T 18-10-2018 IPR006640 SprT-like CH53_2596 bdc2dfef565c10f52497e4be139f8708 170 Hamap MF_00746 Protein SprT [sprT]. 12 165 41.443 T 18-10-2018 IPR023483 Uncharacterised protein family SprT CH53_2294 2f6582e82d6504ef0c75494e1dea8972 232 Pfam PF09335 SNARE associated Golgi protein 48 172 1.5E-19 T 18-10-2018 IPR032816 SNARE associated Golgi protein CH53_3287 3c1e954f983b4b992a2210cf3ff2dc62 213 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_3287 3c1e954f983b4b992a2210cf3ff2dc62 213 Pfam PF12798 4Fe-4S binding domain 147 167 0.021 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_3287 3c1e954f983b4b992a2210cf3ff2dc62 213 Pfam PF00037 4Fe-4S binding domain 76 98 5.1E-7 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_3287 3c1e954f983b4b992a2210cf3ff2dc62 213 Gene3D G3DSA:3.30.70.20 75 207 3.1E-14 T 18-10-2018 CH53_3287 3c1e954f983b4b992a2210cf3ff2dc62 213 SUPERFAMILY SSF54862 2 180 3.0E-38 T 18-10-2018 CH53_3287 3c1e954f983b4b992a2210cf3ff2dc62 213 Gene3D G3DSA:3.30.70.20 3 74 6.3E-8 T 18-10-2018 CH53_202 420588ad8518f45991087c7fa3974b28 281 Gene3D G3DSA:1.10.3720.10 15 269 7.1E-46 T 18-10-2018 IPR035906 MetI-like superfamily CH53_202 420588ad8518f45991087c7fa3974b28 281 SUPERFAMILY SSF161098 8 267 1.4E-52 T 18-10-2018 IPR035906 MetI-like superfamily CH53_202 420588ad8518f45991087c7fa3974b28 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 269 5.6E-14 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_1154 83f37e7dac98b7671fd11e8db1ad0371 427 Hamap MF_00242 Arginine deiminase [arcA]. 11 425 46.752 T 18-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CH53_1154 83f37e7dac98b7671fd11e8db1ad0371 427 Pfam PF02274 Amidinotransferase 28 422 3.0E-110 T 18-10-2018 CH53_1154 83f37e7dac98b7671fd11e8db1ad0371 427 Gene3D G3DSA:3.75.10.10 16 422 5.6E-149 T 18-10-2018 CH53_1154 83f37e7dac98b7671fd11e8db1ad0371 427 TIGRFAM TIGR01078 arcA: arginine deiminase 16 425 1.7E-153 T 18-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CH53_1154 83f37e7dac98b7671fd11e8db1ad0371 427 PRINTS PR01466 Bacterial arginine deiminase signature 361 378 1.0E-47 T 18-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CH53_1154 83f37e7dac98b7671fd11e8db1ad0371 427 PRINTS PR01466 Bacterial arginine deiminase signature 193 208 1.0E-47 T 18-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CH53_1154 83f37e7dac98b7671fd11e8db1ad0371 427 PRINTS PR01466 Bacterial arginine deiminase signature 165 183 1.0E-47 T 18-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CH53_1154 83f37e7dac98b7671fd11e8db1ad0371 427 PRINTS PR01466 Bacterial arginine deiminase signature 404 422 1.0E-47 T 18-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CH53_1154 83f37e7dac98b7671fd11e8db1ad0371 427 PRINTS PR01466 Bacterial arginine deiminase signature 381 395 1.0E-47 T 18-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CH53_1154 83f37e7dac98b7671fd11e8db1ad0371 427 PRINTS PR01466 Bacterial arginine deiminase signature 12 32 1.0E-47 T 18-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CH53_1154 83f37e7dac98b7671fd11e8db1ad0371 427 Gene3D G3DSA:1.10.3930.10 78 164 5.6E-149 T 18-10-2018 CH53_1154 83f37e7dac98b7671fd11e8db1ad0371 427 SUPERFAMILY SSF55909 13 425 2.75E-128 T 18-10-2018 CH53_1154 83f37e7dac98b7671fd11e8db1ad0371 427 PIRSF PIRSF006356 1 425 5.8E-140 T 18-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CH53_4095 074716541f041bfa97af8d1317b17147 116 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 3.1E-47 T 18-10-2018 IPR004480 Monothiol glutaredoxin-related CH53_4095 074716541f041bfa97af8d1317b17147 116 Gene3D G3DSA:3.40.30.10 1 107 1.1E-33 T 18-10-2018 CH53_4095 074716541f041bfa97af8d1317b17147 116 SUPERFAMILY SSF52833 2 101 6.51E-36 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_4095 074716541f041bfa97af8d1317b17147 116 Pfam PF00462 Glutaredoxin 16 80 9.3E-19 T 18-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CH53_4095 074716541f041bfa97af8d1317b17147 116 PIRSF PIRSF005894 1 107 4.4E-52 T 18-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 CH53_1951 5e5248e8cdbb2c1b5103b7fc6ce3ff8d 70 Pfam PF13710 ACT domain 1 58 5.1E-25 T 18-10-2018 CH53_1951 5e5248e8cdbb2c1b5103b7fc6ce3ff8d 70 SUPERFAMILY SSF55021 1 61 2.14E-8 T 18-10-2018 CH53_1951 5e5248e8cdbb2c1b5103b7fc6ce3ff8d 70 Gene3D G3DSA:3.30.70.260 1 70 1.9E-6 T 18-10-2018 CH53_2007 2e23e3a73bc3bf88d35a30b6ba632516 143 SUPERFAMILY SSF54637 4 142 7.88E-23 T 18-10-2018 IPR029069 HotDog domain superfamily CH53_2007 2e23e3a73bc3bf88d35a30b6ba632516 143 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 14 141 3.5E-15 T 18-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CH53_2007 2e23e3a73bc3bf88d35a30b6ba632516 143 Pfam PF03061 Thioesterase superfamily 46 131 2.3E-14 T 18-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CH53_2007 2e23e3a73bc3bf88d35a30b6ba632516 143 Gene3D G3DSA:3.10.129.10 1 143 2.2E-48 T 18-10-2018 CH53_2192 72ca13ddfe583068361afb9a42909c2a 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 79 5.0E-35 T 18-10-2018 IPR010398 Protein of unknown function DUF997 CH53_2192 72ca13ddfe583068361afb9a42909c2a 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 2.7E-30 T 18-10-2018 IPR010398 Protein of unknown function DUF997 CH53_1724 123bccd58312766e96d30ed3507b729e 293 SUPERFAMILY SSF53067 1 289 2.23E-52 T 18-10-2018 CH53_1724 123bccd58312766e96d30ed3507b729e 293 Pfam PF00480 ROK family 5 286 1.1E-36 T 18-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CH53_1724 123bccd58312766e96d30ed3507b729e 293 Gene3D G3DSA:3.30.420.40 1 101 5.1E-20 T 18-10-2018 CH53_1724 123bccd58312766e96d30ed3507b729e 293 Gene3D G3DSA:3.30.420.40 102 291 4.1E-50 T 18-10-2018 CH53_3196 9c121489933475d1ad46d347b2f60ca2 150 Gene3D G3DSA:3.90.1170.40 1 150 1.7E-56 T 18-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 CH53_3196 9c121489933475d1ad46d347b2f60ca2 150 SUPERFAMILY SSF54690 5 150 7.72E-56 T 18-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 CH53_3196 9c121489933475d1ad46d347b2f60ca2 150 Pfam PF02391 MoaE protein 11 120 6.9E-36 T 18-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 CH53_558 37d384915349d557cbfdea0586a5a411 88 Hamap MF_02200 Chaperone NapD [napD]. 6 83 18.269 T 18-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly CH53_558 37d384915349d557cbfdea0586a5a411 88 Gene3D G3DSA:3.30.70.920 6 76 5.6E-26 T 18-10-2018 CH53_558 37d384915349d557cbfdea0586a5a411 88 Pfam PF03927 NapD protein 6 81 1.5E-25 T 18-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly CH53_472 ec5df3e627624382cfcd626c210ffa7a 425 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 5 424 31.534 T 18-10-2018 IPR021144 Uncharacterised protein family UPF0597 CH53_472 ec5df3e627624382cfcd626c210ffa7a 425 Pfam PF03313 Serine dehydratase alpha chain 185 419 4.1E-42 T 18-10-2018 IPR005130 Serine dehydratase-like, alpha subunit CH53_472 ec5df3e627624382cfcd626c210ffa7a 425 PIRSF PIRSF006054 1 425 5.2E-135 T 18-10-2018 IPR021144 Uncharacterised protein family UPF0597 CH53_461 969ae25ee5699cc93748a2fefa178479 160 SUPERFAMILY SSF47598 64 122 5.84E-12 T 18-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 CH53_461 969ae25ee5699cc93748a2fefa178479 160 Gene3D G3DSA:1.10.1220.10 63 146 2.3E-16 T 18-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CH53_461 969ae25ee5699cc93748a2fefa178479 160 Pfam PF03869 Arc-like DNA binding domain 63 104 6.1E-11 T 18-10-2018 IPR005569 Arc-like DNA binding domain GO:0003677 CH53_2677 c9dd58705735b3fe664f60e90b4581ff 752 Pfam PF00384 Molybdopterin oxidoreductase 52 509 8.3E-61 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CH53_2677 c9dd58705735b3fe664f60e90b4581ff 752 Gene3D G3DSA:3.40.50.740 52 517 1.1E-192 T 18-10-2018 CH53_2677 c9dd58705735b3fe664f60e90b4581ff 752 Gene3D G3DSA:2.40.40.20 599 752 5.8E-40 T 18-10-2018 CH53_2677 c9dd58705735b3fe664f60e90b4581ff 752 SUPERFAMILY SSF50692 618 750 3.32E-33 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CH53_2677 c9dd58705735b3fe664f60e90b4581ff 752 Gene3D G3DSA:3.90.55.10 10 565 1.1E-192 T 18-10-2018 CH53_2677 c9dd58705735b3fe664f60e90b4581ff 752 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 453 470 - T 18-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CH53_2677 c9dd58705735b3fe664f60e90b4581ff 752 Gene3D G3DSA:3.40.228.10 145 591 1.1E-192 T 18-10-2018 CH53_2677 c9dd58705735b3fe664f60e90b4581ff 752 Pfam PF01568 Molydopterin dinucleotide binding domain 625 745 2.9E-25 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CH53_2677 c9dd58705735b3fe664f60e90b4581ff 752 SUPERFAMILY SSF53706 10 627 5.37E-152 T 18-10-2018 CH53_4132 619bd15f9a19a347101585d9df119a72 301 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 296 65.308 T 18-10-2018 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 CH53_4132 619bd15f9a19a347101585d9df119a72 301 Pfam PF01522 Polysaccharide deacetylase 15 167 3.6E-11 T 18-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CH53_4132 619bd15f9a19a347101585d9df119a72 301 SUPERFAMILY SSF88713 3 269 1.21E-26 T 18-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CH53_1755 2bda54ccc5df9dd1d4db103c96200711 318 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 311 1.8E-93 T 18-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CH53_1755 2bda54ccc5df9dd1d4db103c96200711 318 Gene3D G3DSA:1.10.3720.10 70 316 1.8E-32 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1755 2bda54ccc5df9dd1d4db103c96200711 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 307 5.5E-18 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_1755 2bda54ccc5df9dd1d4db103c96200711 318 SUPERFAMILY SSF161098 28 304 5.76E-34 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3471 49ac59c4e7112602d9e440533f2f7453 72 Gene3D G3DSA:1.10.238.160 11 68 1.6E-7 T 18-10-2018 CH53_3471 49ac59c4e7112602d9e440533f2f7453 72 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 11 60 9.2E-18 T 18-10-2018 IPR010260 DNA-binding transcriptional activator AlpA CH53_3347 76ec1663b8b100664c25ed75f3b5ddb6 286 SUPERFAMILY SSF54211 2 143 1.82E-20 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CH53_3347 76ec1663b8b100664c25ed75f3b5ddb6 286 PIRSF PIRSF033887 1 281 1.7E-64 T 18-10-2018 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443 CH53_3347 76ec1663b8b100664c25ed75f3b5ddb6 286 Pfam PF00288 GHMP kinases N terminal domain 72 117 1.6E-8 T 18-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CH53_3347 76ec1663b8b100664c25ed75f3b5ddb6 286 Gene3D G3DSA:3.30.230.10 2 144 2.2E-13 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH53_3468 8d3e2f1c29561aa61a1f39d584f53a07 391 Pfam PF08867 FRG domain 27 142 1.2E-19 T 18-10-2018 IPR014966 FRG domain CH53_3468 8d3e2f1c29561aa61a1f39d584f53a07 391 SMART SM00901 24 151 4.6E-21 T 18-10-2018 IPR014966 FRG domain CH53_608 fef00d80930dc5bf21aa1bb0051dd7fc 340 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 247 339 4.6E-42 T 18-10-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 CH53_608 fef00d80930dc5bf21aa1bb0051dd7fc 340 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 5 192 2.9E-72 T 18-10-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 CH53_608 fef00d80930dc5bf21aa1bb0051dd7fc 340 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 5 340 1.1E-180 T 18-10-2018 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 CH53_3734 e05fd082fc9fa8ff0f97baacd51c3629 345 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 4.7E-146 T 18-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CH53_3734 e05fd082fc9fa8ff0f97baacd51c3629 345 Gene3D G3DSA:3.40.630.30 1 272 6.2E-121 T 18-10-2018 CH53_3734 e05fd082fc9fa8ff0f97baacd51c3629 345 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 2.6E-156 T 18-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CH53_3734 e05fd082fc9fa8ff0f97baacd51c3629 345 Gene3D G3DSA:2.40.40.20 275 339 7.1E-11 T 18-10-2018 CH53_3734 e05fd082fc9fa8ff0f97baacd51c3629 345 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 344 72.195 T 18-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CH53_3734 e05fd082fc9fa8ff0f97baacd51c3629 345 SUPERFAMILY SSF55729 1 338 3.98E-131 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_3734 e05fd082fc9fa8ff0f97baacd51c3629 345 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 336 1.3E-141 T 18-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CH53_862 b47be42d67cf17643f901e3974049cd2 328 SUPERFAMILY SSF141130 28 327 2.09E-86 T 18-10-2018 CH53_862 b47be42d67cf17643f901e3974049cd2 328 Gene3D G3DSA:3.10.28.20 249 328 1.3E-14 T 18-10-2018 CH53_862 b47be42d67cf17643f901e3974049cd2 328 Gene3D G3DSA:2.60.120.580 17 135 1.5E-19 T 18-10-2018 CH53_862 b47be42d67cf17643f901e3974049cd2 328 Gene3D G3DSA:2.60.120.580 152 247 5.5E-28 T 18-10-2018 CH53_862 b47be42d67cf17643f901e3974049cd2 328 Pfam PF03069 Acetamidase/Formamidase family 182 313 4.1E-24 T 18-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 CH53_862 b47be42d67cf17643f901e3974049cd2 328 Pfam PF03069 Acetamidase/Formamidase family 31 176 2.0E-9 T 18-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 CH53_4375 ab740ef89c63df325f5efbf99659cb1f 500 PIRSF PIRSF006060 1 494 5.9E-49 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_4375 ab740ef89c63df325f5efbf99659cb1f 500 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 500 1.9E-155 T 18-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CH53_4375 ab740ef89c63df325f5efbf99659cb1f 500 Pfam PF13520 Amino acid permease 9 440 8.6E-67 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_675 f3021b3083a2d6719e761f4b13b01566 61 Gene3D G3DSA:3.30.70.20 1 61 2.1E-20 T 18-10-2018 CH53_675 f3021b3083a2d6719e761f4b13b01566 61 SUPERFAMILY SSF54862 3 40 3.35E-8 T 18-10-2018 CH53_482 e7d1bdbdf1e5fe9494e8be48725ec51b 359 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 352 9.0E-119 T 18-10-2018 IPR011757 Lytic transglycosylase MltB CH53_482 e7d1bdbdf1e5fe9494e8be48725ec51b 359 Gene3D G3DSA:1.10.8.350 60 232 1.9E-114 T 18-10-2018 CH53_482 e7d1bdbdf1e5fe9494e8be48725ec51b 359 SUPERFAMILY SSF53955 52 351 3.38E-90 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily CH53_482 e7d1bdbdf1e5fe9494e8be48725ec51b 359 Pfam PF13406 Transglycosylase SLT domain 57 349 1.4E-90 T 18-10-2018 IPR031304 Transglycosylase SLT domain 2 CH53_482 e7d1bdbdf1e5fe9494e8be48725ec51b 359 Gene3D G3DSA:1.10.530.10 97 352 1.9E-114 T 18-10-2018 CH53_2707 6907e24616e6bac88d6353c8e8bb4e4a 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 1.2E-23 T 18-10-2018 IPR006696 Protein of unknown function DUF423 CH53_1174 d4bcf53fd521d5943765ff07055b6435 75 SUPERFAMILY SSF47413 7 71 5.63E-13 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_1174 d4bcf53fd521d5943765ff07055b6435 75 Gene3D G3DSA:1.10.260.40 1 75 1.7E-27 T 18-10-2018 CH53_1174 d4bcf53fd521d5943765ff07055b6435 75 SMART SM00530 15 70 5.2E-5 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_1174 d4bcf53fd521d5943765ff07055b6435 75 Pfam PF01381 Helix-turn-helix 16 69 7.7E-9 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_2837 9137803d320947afb11a109174cec75d 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.02 T 18-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CH53_2837 9137803d320947afb11a109174cec75d 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 7.1E-76 T 18-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CH53_2837 9137803d320947afb11a109174cec75d 149 Pfam PF03477 ATP cone domain 50 136 2.9E-15 T 18-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CH53_4272 3aae76a9b092c6b87b48d54e7cc3c5b9 388 SUPERFAMILY SSF82171 15 381 1.02E-29 T 18-10-2018 CH53_4272 3aae76a9b092c6b87b48d54e7cc3c5b9 388 Pfam PF14583 Oligogalacturonate lyase 1 386 6.1E-257 T 18-10-2018 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6 CH53_4272 3aae76a9b092c6b87b48d54e7cc3c5b9 388 Gene3D G3DSA:2.130.10.10 1 388 6.0E-170 T 18-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CH53_2403 a9a779d0b88de2da596d3b2fd820c26e 241 Gene3D G3DSA:3.30.1330.60 35 228 4.0E-42 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_2403 a9a779d0b88de2da596d3b2fd820c26e 241 SUPERFAMILY SSF103088 94 212 6.67E-19 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_2403 a9a779d0b88de2da596d3b2fd820c26e 241 Pfam PF00691 OmpA family 109 204 1.0E-12 T 18-10-2018 IPR006665 OmpA-like domain CH53_2029 3286ab6247604e715286115549d8d955 222 SUPERFAMILY SSF52540 1 216 2.53E-65 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2029 3286ab6247604e715286115549d8d955 222 Pfam PF00005 ABC transporter 18 165 7.1E-36 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2029 3286ab6247604e715286115549d8d955 222 Gene3D G3DSA:3.40.50.300 1 221 1.4E-62 T 18-10-2018 CH53_2029 3286ab6247604e715286115549d8d955 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 7.3E-94 T 18-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 CH53_2029 3286ab6247604e715286115549d8d955 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2029 3286ab6247604e715286115549d8d955 222 SMART SM00382 27 214 1.7E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2556 ba3d8ee1f563c09fcb2d3973bd0cfed7 86 Gene3D G3DSA:2.60.200.60 15 85 5.1E-13 T 18-10-2018 CH53_2556 ba3d8ee1f563c09fcb2d3973bd0cfed7 86 Pfam PF05488 PAAR motif 8 77 2.6E-11 T 18-10-2018 IPR008727 PAAR motif CH53_3650 3c5d1d5e15447ad8fad68afd2239051e 224 Pfam PF10946 Protein of unknown function DUF2625 5 207 5.4E-80 T 18-10-2018 IPR021239 Protein of unknown function DUF2625 CH53_3827 f8cd82bd1bfbab2e66fce839a7a9217f 218 SUPERFAMILY SSF56529 11 211 3.92E-67 T 18-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CH53_3827 f8cd82bd1bfbab2e66fce839a7a9217f 218 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 205 1.0E-52 T 18-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CH53_3827 f8cd82bd1bfbab2e66fce839a7a9217f 218 Gene3D G3DSA:3.90.850.10 1 218 1.7E-75 T 18-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 Gene3D G3DSA:3.30.1340.10 153 239 3.8E-21 T 18-10-2018 IPR035895 HPr-like superfamily CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 SUPERFAMILY SSF47831 275 390 2.88E-28 T 18-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 156 232 1.4E-15 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 SUPERFAMILY SSF52009 373 473 1.19E-20 T 18-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 Pfam PF03610 PTS system fructose IIA component 4 119 3.5E-24 T 18-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 Pfam PF00381 PTS HPr component phosphorylation site 157 234 1.0E-17 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 Gene3D G3DSA:3.50.30.10 251 473 5.5E-55 T 18-10-2018 CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 Gene3D G3DSA:1.10.274.10 268 393 5.5E-55 T 18-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 Gene3D G3DSA:3.40.50.510 1 131 9.7E-43 T 18-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 SUPERFAMILY SSF55594 156 239 3.01E-20 T 18-10-2018 IPR035895 HPr-like superfamily CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 Pfam PF05524 PEP-utilising enzyme, N-terminal 251 373 1.0E-21 T 18-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 165 172 - T 18-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 PRINTS PR00107 Phosphocarrier protein signature 205 222 1.1E-8 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 PRINTS PR00107 Phosphocarrier protein signature 190 205 1.1E-8 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 PRINTS PR00107 Phosphocarrier protein signature 165 181 1.1E-8 T 18-10-2018 IPR000032 Phosphocarrier protein HPr-like CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 Pfam PF00391 PEP-utilising enzyme, mobile domain 401 469 1.8E-13 T 18-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 SUPERFAMILY SSF53062 1 128 4.97E-32 T 18-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CH53_1148 9e2a6ff5ce8e8470a624b3ccca963607 476 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 125 8.2E-37 T 18-10-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain CH53_2518 77bf30497d0182bcd2f2adc2831181b2 453 Gene3D G3DSA:3.20.20.70 142 453 5.8E-152 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2518 77bf30497d0182bcd2f2adc2831181b2 453 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 444 2.2E-199 T 18-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CH53_2518 77bf30497d0182bcd2f2adc2831181b2 453 Gene3D G3DSA:1.10.220.70 55 141 6.5E-40 T 18-10-2018 CH53_2518 77bf30497d0182bcd2f2adc2831181b2 453 Gene3D G3DSA:2.30.170.30 1 54 4.9E-27 T 18-10-2018 CH53_2518 77bf30497d0182bcd2f2adc2831181b2 453 PIRSF PIRSF018788 1 453 3.6E-228 T 18-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CH53_3707 6a81effd20ed1c8a46b68fffd6fbe19c 430 Pfam PF02687 FtsX-like permease family 335 420 6.2E-12 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CH53_3707 6a81effd20ed1c8a46b68fffd6fbe19c 430 Pfam PF12704 MacB-like periplasmic core domain 19 222 3.9E-6 T 18-10-2018 IPR025857 MacB-like periplasmic core domain CH53_2239 0705d6b13562cada2d3a711be69c9d22 331 SUPERFAMILY SSF51735 1 318 8.71E-46 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_2239 0705d6b13562cada2d3a711be69c9d22 331 Gene3D G3DSA:3.90.25.10 178 314 1.1E-116 T 18-10-2018 CH53_2239 0705d6b13562cada2d3a711be69c9d22 331 Gene3D G3DSA:3.40.50.720 6 305 1.1E-116 T 18-10-2018 CH53_2239 0705d6b13562cada2d3a711be69c9d22 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 205 2.9E-20 T 18-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CH53_2800 cadd8590571cfb7fc979a13041a3b511 152 SUPERFAMILY SSF53271 4 144 6.56E-31 T 18-10-2018 IPR029057 Phosphoribosyltransferase-like CH53_2800 cadd8590571cfb7fc979a13041a3b511 152 Pfam PF00156 Phosphoribosyl transferase domain 11 145 4.0E-17 T 18-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CH53_2800 cadd8590571cfb7fc979a13041a3b511 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.763 T 18-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 CH53_2800 cadd8590571cfb7fc979a13041a3b511 152 Gene3D G3DSA:3.40.50.2020 1 152 6.1E-43 T 18-10-2018 CH53_2182 07222df9a28435a5a089c6003dfe32b4 201 Gene3D G3DSA:3.40.50.10490 3 199 2.9E-48 T 18-10-2018 CH53_2182 07222df9a28435a5a089c6003dfe32b4 201 Pfam PF01380 SIS domain 40 169 3.4E-19 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CH53_2182 07222df9a28435a5a089c6003dfe32b4 201 SUPERFAMILY SSF53697 15 190 6.2E-35 T 18-10-2018 CH53_3408 31aee1b6af9ee525229c780185f43bf6 515 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 92 511 7.0E-171 T 18-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH53_3408 31aee1b6af9ee525229c780185f43bf6 515 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 49 511 2.8E-205 T 18-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH53_4164 6f959fe1d4632358755e55e41c6922d0 1011 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 764 839 1.4E-18 T 18-10-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal CH53_4164 6f959fe1d4632358755e55e41c6922d0 1011 Pfam PF06791 Prophage tail length tape measure protein 195 395 1.3E-65 T 18-10-2018 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal CH53_4164 6f959fe1d4632358755e55e41c6922d0 1011 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 489 751 0.007 T 18-10-2018 CH53_4164 6f959fe1d4632358755e55e41c6922d0 1011 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 629 954 4.2E-96 T 18-10-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal CH53_2226 05231f13db754c436b7b8e16f8bbf0bf 246 SUPERFAMILY SSF51569 72 209 7.87E-5 T 18-10-2018 CH53_2226 05231f13db754c436b7b8e16f8bbf0bf 246 Gene3D G3DSA:3.20.20.70 1 246 1.5E-118 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2226 05231f13db754c436b7b8e16f8bbf0bf 246 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 8 243 2.3E-123 T 18-10-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CH53_2226 05231f13db754c436b7b8e16f8bbf0bf 246 Pfam PF07071 KDGP aldolase 8 224 2.1E-110 T 18-10-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CH53_4403 797c74216ecac36cc172733c60eb634c 208 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 206 36.359 T 18-10-2018 IPR007451 High frequency lysogenization protein HflD CH53_4403 797c74216ecac36cc172733c60eb634c 208 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 197 6.0E-94 T 18-10-2018 CH53_4403 797c74216ecac36cc172733c60eb634c 208 Gene3D G3DSA:1.10.3890.10 1 208 5.3E-79 T 18-10-2018 IPR035932 HflD-like superfamily CH53_4403 797c74216ecac36cc172733c60eb634c 208 SUPERFAMILY SSF101322 2 207 5.36E-81 T 18-10-2018 IPR035932 HflD-like superfamily CH53_4403 797c74216ecac36cc172733c60eb634c 208 Pfam PF04356 Protein of unknown function (DUF489) 7 198 2.1E-76 T 18-10-2018 IPR007451 High frequency lysogenization protein HflD CH53_3784 ab1a5ec88ac6c5d89468467c3e95e980 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 4.6E-18 T 18-10-2018 IPR000182 GNAT domain CH53_3784 ab1a5ec88ac6c5d89468467c3e95e980 194 Gene3D G3DSA:3.40.630.30 10 191 3.1E-46 T 18-10-2018 CH53_3784 ab1a5ec88ac6c5d89468467c3e95e980 194 SUPERFAMILY SSF55729 12 186 1.87E-41 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_856 810ef580346e6f537556276b2b216bc9 547 Pfam PF05683 Fumarase C-terminus 332 537 1.7E-93 T 18-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CH53_856 810ef580346e6f537556276b2b216bc9 547 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 18-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CH53_856 810ef580346e6f537556276b2b216bc9 547 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 75 323 2.9E-30 T 18-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CH53_856 810ef580346e6f537556276b2b216bc9 547 PIRSF PIRSF001394 30 547 1.1E-229 T 18-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CH53_856 810ef580346e6f537556276b2b216bc9 547 SUPERFAMILY SSF117457 361 536 2.88E-62 T 18-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 CH53_856 810ef580346e6f537556276b2b216bc9 547 Gene3D G3DSA:3.20.130.10 347 537 2.9E-58 T 18-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 CH53_856 810ef580346e6f537556276b2b216bc9 547 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 2.6E-62 T 18-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CH53_856 810ef580346e6f537556276b2b216bc9 547 Pfam PF05681 Fumarate hydratase (Fumerase) 51 325 5.6E-83 T 18-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CH53_4367 4f3f26803b2a90b8b7e88aa05c5b548b 81 Pfam PF13269 Protein of unknown function (DUF4060) 3 75 2.4E-40 T 18-10-2018 IPR025135 Protein of unknown function DUF4060 CH53_2523 da91d22e8840bbab17aa095d2007ff35 349 Gene3D G3DSA:1.10.10.60 238 344 6.8E-28 T 18-10-2018 CH53_2523 da91d22e8840bbab17aa095d2007ff35 349 SMART SM00342 255 341 5.5E-21 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_2523 da91d22e8840bbab17aa095d2007ff35 349 Pfam PF12833 Helix-turn-helix domain 261 339 4.4E-22 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_2523 da91d22e8840bbab17aa095d2007ff35 349 SUPERFAMILY SSF46689 239 289 3.05E-5 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_2523 da91d22e8840bbab17aa095d2007ff35 349 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 292 337 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CH53_2420 616f43871d382f9d40f3ada163241b74 462 Gene3D G3DSA:3.20.20.70 141 453 4.1E-144 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2420 616f43871d382f9d40f3ada163241b74 462 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 11 445 1.1E-221 T 18-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CH53_2420 616f43871d382f9d40f3ada163241b74 462 PIRSF PIRSF018788 1 458 2.2E-236 T 18-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CH53_2420 616f43871d382f9d40f3ada163241b74 462 Gene3D G3DSA:1.10.220.70 54 140 1.3E-34 T 18-10-2018 CH53_2420 616f43871d382f9d40f3ada163241b74 462 Gene3D G3DSA:2.30.170.30 1 53 1.4E-23 T 18-10-2018 CH53_486 741534410e5ee976cbab445d6327cf77 175 Pfam PF09900 Predicted membrane protein (DUF2127) 23 161 2.0E-30 T 18-10-2018 IPR021125 Protein of unknown function DUF2127 CH53_486 741534410e5ee976cbab445d6327cf77 175 PIRSF PIRSF034455 3 171 5.4E-50 T 18-10-2018 IPR014591 Uncharacterised conserved protein UCP034455 CH53_3825 2ca2b7b2700249f84e078afffe7fee4a 90 SUPERFAMILY SSF160191 1 86 3.53E-37 T 18-10-2018 IPR038068 YcgL-like superfamily CH53_3825 2ca2b7b2700249f84e078afffe7fee4a 90 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.094 T 18-10-2018 IPR027354 YcgL domain CH53_3825 2ca2b7b2700249f84e078afffe7fee4a 90 Pfam PF05166 YcgL domain 3 75 1.1E-32 T 18-10-2018 IPR027354 YcgL domain CH53_3825 2ca2b7b2700249f84e078afffe7fee4a 90 Gene3D G3DSA:3.10.510.20 1 74 1.7E-30 T 18-10-2018 IPR038068 YcgL-like superfamily CH53_3825 2ca2b7b2700249f84e078afffe7fee4a 90 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 83 7.0E-40 T 18-10-2018 IPR027354 YcgL domain CH53_2648 2aa2f40e930305289803bd6abd3b64f4 360 SUPERFAMILY SSF53822 75 340 1.16E-40 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_2648 2aa2f40e930305289803bd6abd3b64f4 360 SMART SM00354 4 71 6.6E-4 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_2648 2aa2f40e930305289803bd6abd3b64f4 360 Pfam PF13377 Periplasmic binding protein-like domain 173 334 8.5E-27 T 18-10-2018 CH53_2648 2aa2f40e930305289803bd6abd3b64f4 360 Gene3D G3DSA:3.40.50.2300 164 333 1.2E-44 T 18-10-2018 CH53_2648 2aa2f40e930305289803bd6abd3b64f4 360 SUPERFAMILY SSF47413 5 59 3.94E-8 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_2648 2aa2f40e930305289803bd6abd3b64f4 360 Gene3D G3DSA:1.10.260.40 5 62 6.9E-9 T 18-10-2018 CH53_2648 2aa2f40e930305289803bd6abd3b64f4 360 Gene3D G3DSA:3.40.50.2300 75 330 1.2E-44 T 18-10-2018 CH53_2648 2aa2f40e930305289803bd6abd3b64f4 360 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 46 1.2E-7 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_22 b3fed7034f6874e0d915ec8b0c550297 347 Pfam PF01594 AI-2E family transporter 14 327 4.6E-70 T 18-10-2018 IPR002549 Transmembrane protein TqsA-like CH53_710 bf12d78e25f1896eeafc226ce1829fb2 109 Pfam PF14282 FlxA-like protein 10 95 3.4E-8 T 18-10-2018 IPR025577 FlxA-like protein CH53_3595 989165c26ede928e8f620fa522de0740 220 SUPERFAMILY SSF161098 13 206 4.45E-49 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3595 989165c26ede928e8f620fa522de0740 220 Gene3D G3DSA:1.10.3720.10 4 219 4.0E-61 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3595 989165c26ede928e8f620fa522de0740 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 5.8E-24 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_3595 989165c26ede928e8f620fa522de0740 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 1.7E-32 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CH53_684 35727c97dbcbae33df69e189a3e6f223 151 PIRSF PIRSF004923 1 150 6.5E-37 T 18-10-2018 IPR026268 Protein RseC CH53_684 35727c97dbcbae33df69e189a3e6f223 151 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 2.8E-34 T 18-10-2018 CH53_3849 f903122219d2aa4400e3e39b40577879 90 Pfam PF07023 Protein of unknown function (DUF1315) 5 81 3.5E-27 T 18-10-2018 IPR009749 Protein of unknown function DUF1315 CH53_700 aacfb61a4cb259a2aa64195316e5430b 144 Gene3D G3DSA:3.30.530.20 3 143 4.5E-40 T 18-10-2018 IPR023393 START-like domain superfamily CH53_700 aacfb61a4cb259a2aa64195316e5430b 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 3.4E-33 T 18-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 CH53_700 aacfb61a4cb259a2aa64195316e5430b 144 SUPERFAMILY SSF55961 1 142 6.77E-36 T 18-10-2018 CH53_912 6f78b1199aebed924b5eb1b7f4814b40 437 Pfam PF03432 Relaxase/Mobilisation nuclease domain 10 255 1.1E-12 T 18-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 CH53_3740 493edf46e037a267a00322807a6678bf 406 SUPERFAMILY SSF51338 6 404 1.36E-27 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_3740 493edf46e037a267a00322807a6678bf 406 Gene3D G3DSA:2.30.40.10 18 402 2.7E-161 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CH53_3740 493edf46e037a267a00322807a6678bf 406 SUPERFAMILY SSF51556 66 366 1.11E-86 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_3740 493edf46e037a267a00322807a6678bf 406 Pfam PF01979 Amidohydrolase family 64 403 2.3E-16 T 18-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CH53_3740 493edf46e037a267a00322807a6678bf 406 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 405 42.9 T 18-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CH53_3740 493edf46e037a267a00322807a6678bf 406 TIGRFAM TIGR01224 hutI: imidazolonepropionase 28 404 2.7E-163 T 18-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CH53_3740 493edf46e037a267a00322807a6678bf 406 Gene3D G3DSA:3.20.20.140 67 365 2.7E-161 T 18-10-2018 CH53_1249 0c3f29eed23b14a6607025457a822412 174 Pfam PF02525 Flavodoxin-like fold 4 165 1.1E-40 T 18-10-2018 IPR003680 Flavodoxin-like fold CH53_1249 0c3f29eed23b14a6607025457a822412 174 SUPERFAMILY SSF52218 1 173 1.21E-45 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_1249 0c3f29eed23b14a6607025457a822412 174 Gene3D G3DSA:3.40.50.360 1 171 9.6E-50 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_4187 f6c0a452c507332bb38810d15e20fdb9 274 Pfam PF03589 Antitermination protein 180 266 1.1E-24 T 18-10-2018 IPR003222 Antitermination protein GO:0003677|GO:0006355 CH53_4187 f6c0a452c507332bb38810d15e20fdb9 274 Pfam PF03589 Antitermination protein 23 109 1.3E-21 T 18-10-2018 IPR003222 Antitermination protein GO:0003677|GO:0006355 CH53_4187 f6c0a452c507332bb38810d15e20fdb9 274 Gene3D G3DSA:3.30.260.20 162 274 2.7E-39 T 18-10-2018 CH53_4187 f6c0a452c507332bb38810d15e20fdb9 274 Gene3D G3DSA:3.30.260.20 60 139 2.1E-18 T 18-10-2018 CH53_4187 f6c0a452c507332bb38810d15e20fdb9 274 SUPERFAMILY SSF57938 171 221 8.5E-6 T 18-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CH53_4162 742399e18ecec011c325771a7dc8251b 250 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 6 245 6.7E-64 T 18-10-2018 IPR006487 Bacteriophage lambda, GpL, minor tail CH53_4162 742399e18ecec011c325771a7dc8251b 250 Pfam PF05100 Phage minor tail protein L 28 247 1.7E-83 T 18-10-2018 IPR006487 Bacteriophage lambda, GpL, minor tail CH53_743 7b698d2f49e89f9d53afbca9863d35e8 149 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 149 1.0E-63 T 18-10-2018 IPR009587 Protein of unknown function DUF1198 CH53_743 7b698d2f49e89f9d53afbca9863d35e8 149 Pfam PF06711 Protein of unknown function (DUF1198) 1 143 6.4E-65 T 18-10-2018 IPR009587 Protein of unknown function DUF1198 CH53_1098 c41c25059c4207159845b6c745526a63 169 SUPERFAMILY SSF103088 52 166 1.18E-31 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_1098 c41c25059c4207159845b6c745526a63 169 Gene3D G3DSA:3.30.1330.60 33 168 2.8E-41 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_1098 c41c25059c4207159845b6c745526a63 169 Pfam PF00691 OmpA family 65 160 2.1E-17 T 18-10-2018 IPR006665 OmpA-like domain CH53_1098 c41c25059c4207159845b6c745526a63 169 PRINTS PR01021 OMPA domain signature 96 111 6.8E-11 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CH53_1098 c41c25059c4207159845b6c745526a63 169 PRINTS PR01021 OMPA domain signature 111 127 6.8E-11 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CH53_1098 c41c25059c4207159845b6c745526a63 169 PRINTS PR01021 OMPA domain signature 66 88 6.8E-11 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CH53_1563 e4fc2d586a006ffe742f880e3ba53049 82 Hamap MF_01586 Probable [Fe-S]-dependent transcriptional repressor [feoC]. 1 79 25.373 T 18-10-2018 IPR023732 Probable [Fe-S]-dependent transcriptional repressor CH53_1563 e4fc2d586a006ffe742f880e3ba53049 82 Pfam PF09012 FeoC like transcriptional regulator 3 76 1.1E-18 T 18-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC CH53_1563 e4fc2d586a006ffe742f880e3ba53049 82 SUPERFAMILY SSF46785 1 74 2.73E-20 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_1563 e4fc2d586a006ffe742f880e3ba53049 82 Gene3D G3DSA:1.10.10.10 1 80 1.3E-34 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_692 fc9db0a909efb7bb390f7db39d20fcec 322 Gene3D G3DSA:3.40.50.1820 101 227 1.6E-7 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_692 fc9db0a909efb7bb390f7db39d20fcec 322 SUPERFAMILY SSF53474 89 231 6.82E-17 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2358 b1c4b7f4ab523fcab19ca69c881626c5 259 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 1 259 5.5E-86 T 18-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CH53_2358 b1c4b7f4ab523fcab19ca69c881626c5 259 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 1 259 3.8E-97 T 18-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CH53_4383 e054e065ee5528200ddd9690cd9d6a4b 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 271 8.2E-6 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_4383 e054e065ee5528200ddd9690cd9d6a4b 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 287 8.2E-6 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CH53_4383 e054e065ee5528200ddd9690cd9d6a4b 289 Gene3D G3DSA:1.10.10.60 247 289 4.2E-14 T 18-10-2018 CH53_4383 e054e065ee5528200ddd9690cd9d6a4b 289 SMART SM00342 204 287 1.9E-29 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_4383 e054e065ee5528200ddd9690cd9d6a4b 289 Pfam PF12833 Helix-turn-helix domain 210 289 6.3E-23 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CH53_4383 e054e065ee5528200ddd9690cd9d6a4b 289 SUPERFAMILY SSF46689 189 238 4.44E-11 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_4383 e054e065ee5528200ddd9690cd9d6a4b 289 Gene3D G3DSA:1.10.10.60 186 246 6.5E-17 T 18-10-2018 CH53_4383 e054e065ee5528200ddd9690cd9d6a4b 289 SUPERFAMILY SSF46689 241 289 3.09E-12 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_3778 186f279580a749063792679dbfdcb8cc 401 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 40.617 T 18-10-2018 IPR022855 Multidrug resistance protein MdtH CH53_3778 186f279580a749063792679dbfdcb8cc 401 SUPERFAMILY SSF103473 14 392 1.83E-53 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_3778 186f279580a749063792679dbfdcb8cc 401 Gene3D G3DSA:1.20.1250.20 13 386 4.7E-48 T 18-10-2018 CH53_3778 186f279580a749063792679dbfdcb8cc 401 Pfam PF07690 Major Facilitator Superfamily 20 240 4.1E-24 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_2402 5c73f7439e3d03afc4f360a1f35e683e 564 Gene3D G3DSA:1.10.490.80 460 563 7.5E-10 T 18-10-2018 CH53_2402 5c73f7439e3d03afc4f360a1f35e683e 564 Pfam PF00771 FHIPEP family 1 555 3.2E-180 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_2402 5c73f7439e3d03afc4f360a1f35e683e 564 Gene3D G3DSA:3.40.30.60 226 369 1.5E-41 T 18-10-2018 CH53_2402 5c73f7439e3d03afc4f360a1f35e683e 564 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 53 70 6.0E-37 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_2402 5c73f7439e3d03afc4f360a1f35e683e 564 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 23 41 6.0E-37 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_2402 5c73f7439e3d03afc4f360a1f35e683e 564 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 104 118 6.0E-37 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_2402 5c73f7439e3d03afc4f360a1f35e683e 564 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 4 20 6.0E-37 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CH53_2402 5c73f7439e3d03afc4f360a1f35e683e 564 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 9 32 - T 18-10-2018 IPR025505 FHIPEP conserved site CH53_2402 5c73f7439e3d03afc4f360a1f35e683e 564 Gene3D G3DSA:1.10.8.540 370 457 6.3E-14 T 18-10-2018 CH53_1162 3511fa1aabbc3d3d19c38b0ef5eeb3e6 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 307 1.0E-46 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_2330 3e939036a248abbbe2df414ce72ad061 119 Pfam PF02152 Dihydroneopterin aldolase 4 112 1.7E-31 T 18-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CH53_2330 3e939036a248abbbe2df414ce72ad061 119 Gene3D G3DSA:3.30.1130.10 1 118 1.4E-44 T 18-10-2018 CH53_2330 3e939036a248abbbe2df414ce72ad061 119 SUPERFAMILY SSF55620 1 115 4.39E-37 T 18-10-2018 CH53_2330 3e939036a248abbbe2df414ce72ad061 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 1.2E-28 T 18-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CH53_2330 3e939036a248abbbe2df414ce72ad061 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 9.3E-40 T 18-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CH53_2330 3e939036a248abbbe2df414ce72ad061 119 SMART SM00905 4 114 2.3E-46 T 18-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CH53_3918 53ded2b6f4acaba3c5add720ea6a8aed 245 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 39.852 T 18-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_3918 53ded2b6f4acaba3c5add720ea6a8aed 245 SUPERFAMILY SSF51366 14 240 3.05E-81 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CH53_3918 53ded2b6f4acaba3c5add720ea6a8aed 245 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 236 5.5E-54 T 18-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_3918 53ded2b6f4acaba3c5add720ea6a8aed 245 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 18-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_3918 53ded2b6f4acaba3c5add720ea6a8aed 245 SMART SM00934 16 237 1.4E-101 T 18-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_3918 53ded2b6f4acaba3c5add720ea6a8aed 245 Gene3D G3DSA:3.20.20.70 2 245 3.0E-87 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3918 53ded2b6f4acaba3c5add720ea6a8aed 245 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 17 237 6.7E-57 T 18-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CH53_2997 21b8079f72ab8c7d94d4c9436b066a40 101 Pfam PF16083 LydA holin phage, holin superfamily III 15 92 2.0E-24 T 18-10-2018 IPR032126 LydA-like holin CH53_3395 b3d40da89fbe9897ce4618ad4c424448 287 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 33 280 8.0E-160 T 18-10-2018 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CH53_3395 b3d40da89fbe9897ce4618ad4c424448 287 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 35 279 3.0E-101 T 18-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CH53_3395 b3d40da89fbe9897ce4618ad4c424448 287 Pfam PF01048 Phosphorylase superfamily 35 280 7.8E-40 T 18-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CH53_3395 b3d40da89fbe9897ce4618ad4c424448 287 SUPERFAMILY SSF53167 18 280 2.36E-79 T 18-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CH53_3395 b3d40da89fbe9897ce4618ad4c424448 287 Gene3D G3DSA:3.40.50.1580 2 284 1.3E-108 T 18-10-2018 CH53_3395 b3d40da89fbe9897ce4618ad4c424448 287 PIRSF PIRSF000477 5 281 8.6E-110 T 18-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CH53_2618 beef74e92287f662eb556640e4c462ed 389 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 18-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CH53_2618 beef74e92287f662eb556640e4c462ed 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 6.6E-15 T 18-10-2018 CH53_2618 beef74e92287f662eb556640e4c462ed 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 6.6E-15 T 18-10-2018 CH53_2618 beef74e92287f662eb556640e4c462ed 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 6.6E-15 T 18-10-2018 CH53_2618 beef74e92287f662eb556640e4c462ed 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 6.6E-15 T 18-10-2018 CH53_2618 beef74e92287f662eb556640e4c462ed 389 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 385 2.2E-144 T 18-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 CH53_2618 beef74e92287f662eb556640e4c462ed 389 Pfam PF01494 FAD binding domain 2 338 4.8E-26 T 18-10-2018 IPR002938 FAD-binding domain GO:0071949 CH53_2618 beef74e92287f662eb556640e4c462ed 389 Gene3D G3DSA:3.30.9.50 78 267 8.3E-96 T 18-10-2018 CH53_2618 beef74e92287f662eb556640e4c462ed 389 Gene3D G3DSA:3.50.50.60 3 333 8.3E-96 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2618 beef74e92287f662eb556640e4c462ed 389 SUPERFAMILY SSF51905 2 379 2.11E-55 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_2618 beef74e92287f662eb556640e4c462ed 389 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 385 1.3E-130 T 18-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CH53_467 4876359a42a0ffbaa2ae79458400d4e1 504 Pfam PF03553 Na+/H+ antiporter family 187 478 6.7E-36 T 18-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CH53_537 adddd91abc31bf7b0d418ae335d0f0c3 675 Pfam PF05159 Capsule polysaccharide biosynthesis protein 365 450 1.3E-13 T 18-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 CH53_537 adddd91abc31bf7b0d418ae335d0f0c3 675 Pfam PF05159 Capsule polysaccharide biosynthesis protein 38 129 8.9E-10 T 18-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 CH53_537 adddd91abc31bf7b0d418ae335d0f0c3 675 Pfam PF05159 Capsule polysaccharide biosynthesis protein 143 298 1.1E-41 T 18-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 CH53_537 adddd91abc31bf7b0d418ae335d0f0c3 675 Pfam PF05159 Capsule polysaccharide biosynthesis protein 471 619 1.2E-27 T 18-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 CH53_4185 c2b7dca7c8ed9b9cc570c5cfb351ca60 147 Gene3D G3DSA:1.10.530.40 5 147 5.3E-57 T 18-10-2018 CH53_4185 c2b7dca7c8ed9b9cc570c5cfb351ca60 147 Pfam PF00959 Phage lysozyme 35 139 2.1E-22 T 18-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CH53_4185 c2b7dca7c8ed9b9cc570c5cfb351ca60 147 SUPERFAMILY SSF53955 3 146 3.73E-53 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily CH53_1832 9496325dfb79c1217eb8133de11f3980 394 Pfam PF07670 Nucleoside recognition 93 189 1.7E-5 T 18-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CH53_1832 9496325dfb79c1217eb8133de11f3980 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 4.1E-17 T 18-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CH53_1832 9496325dfb79c1217eb8133de11f3980 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 393 1.5E-55 T 18-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CH53_1392 b65f72893184edade29d6b7aeef49e31 444 Pfam PF01490 Transmembrane amino acid transporter protein 26 444 6.4E-7 T 18-10-2018 IPR013057 Amino acid transporter, transmembrane domain CH53_1392 b65f72893184edade29d6b7aeef49e31 444 Hamap MF_01583 Threonine/serine transporter TdcC [tdcC]. 1 444 50.149 T 18-10-2018 IPR023726 Threonine/serine transporter TdcC GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 CH53_1392 b65f72893184edade29d6b7aeef49e31 444 TIGRFAM TIGR00814 stp: serine transporter 18 434 1.1E-165 T 18-10-2018 IPR004694 Hydroxy amino acid transporter GO:0006865|GO:0015171|GO:0016021 CH53_1057 935708076994a1e38d9105178f58b4f8 331 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 325 4.1E-128 T 18-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 CH53_1057 935708076994a1e38d9105178f58b4f8 331 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 329 36.376 T 18-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 CH53_1057 935708076994a1e38d9105178f58b4f8 331 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 322 3.7E-106 T 18-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 CH53_1057 935708076994a1e38d9105178f58b4f8 331 SUPERFAMILY SSF53659 7 328 3.68E-113 T 18-10-2018 CH53_1057 935708076994a1e38d9105178f58b4f8 331 Gene3D G3DSA:3.40.718.10 1 331 1.2E-132 T 18-10-2018 CH53_3428 4f00fc8abeeba85cf5bc4fc2b02b9a95 465 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 112 1.8E-19 T 18-10-2018 IPR010657 ImpA, N-terminal CH53_3428 4f00fc8abeeba85cf5bc4fc2b02b9a95 465 Pfam PF12486 Type VI secretion system, EvfB, or VasL 313 458 2.8E-51 T 18-10-2018 IPR021069 ImpA, C-terminal CH53_1974 fafc50a74c930473cb8bec8b48f6a8af 376 Gene3D G3DSA:3.40.50.2000 187 356 4.5E-157 T 18-10-2018 CH53_1974 fafc50a74c930473cb8bec8b48f6a8af 376 Gene3D G3DSA:3.40.50.2000 2 367 4.5E-157 T 18-10-2018 CH53_1974 fafc50a74c930473cb8bec8b48f6a8af 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 8.5E-172 T 18-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 CH53_1974 fafc50a74c930473cb8bec8b48f6a8af 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 68.317 T 18-10-2018 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 CH53_1974 fafc50a74c930473cb8bec8b48f6a8af 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 9.3E-128 T 18-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CH53_1974 fafc50a74c930473cb8bec8b48f6a8af 376 SUPERFAMILY SSF53756 2 372 2.97E-142 T 18-10-2018 CH53_853 e2a3cf943119acbd30f10413569118e4 348 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 316 2.9E-23 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_2853 792948a5ba21dcecd247da14af0f9b40 204 Gene3D G3DSA:1.20.120.80 19 204 4.9E-60 T 18-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2853 792948a5ba21dcecd247da14af0f9b40 204 Pfam PF00510 Cytochrome c oxidase subunit III 16 202 1.5E-14 T 18-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2853 792948a5ba21dcecd247da14af0f9b40 204 SUPERFAMILY SSF81452 21 202 9.55E-59 T 18-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CH53_2853 792948a5ba21dcecd247da14af0f9b40 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 2.6E-89 T 18-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 CH53_243 5f580e3c36f0ad138afaaff178c105ec 144 Pfam PF03610 PTS system fructose IIA component 4 113 1.1E-28 T 18-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CH53_243 5f580e3c36f0ad138afaaff178c105ec 144 Gene3D G3DSA:3.40.50.510 1 138 2.7E-33 T 18-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CH53_243 5f580e3c36f0ad138afaaff178c105ec 144 SUPERFAMILY SSF53062 1 127 1.18E-33 T 18-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CH53_3513 5a3019a7236da4cacb729dd21fa8ace0 391 Pfam PF00419 Fimbrial protein 253 390 1.0E-11 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_3513 5a3019a7236da4cacb729dd21fa8ace0 391 SUPERFAMILY SSF49401 255 390 1.49E-22 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_3513 5a3019a7236da4cacb729dd21fa8ace0 391 Gene3D G3DSA:2.60.40.1090 254 391 1.5E-24 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_2462 c1c7d72bf3fba2c0a24238983de75564 269 Pfam PF07690 Major Facilitator Superfamily 11 156 2.6E-22 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_2462 c1c7d72bf3fba2c0a24238983de75564 269 Gene3D G3DSA:1.20.1250.20 2 160 6.4E-28 T 18-10-2018 CH53_2462 c1c7d72bf3fba2c0a24238983de75564 269 SUPERFAMILY SSF103473 5 268 4.71E-32 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_3438 0e31b8cd9753ed426d3cf0c0d326e794 370 SMART SM00382 51 234 2.1E-17 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3438 0e31b8cd9753ed426d3cf0c0d326e794 370 Gene3D G3DSA:2.40.50.940 245 360 1.1E-11 T 18-10-2018 CH53_3438 0e31b8cd9753ed426d3cf0c0d326e794 370 Gene3D G3DSA:3.40.50.300 26 244 2.1E-68 T 18-10-2018 CH53_3438 0e31b8cd9753ed426d3cf0c0d326e794 370 SUPERFAMILY SSF52540 27 266 4.84E-86 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3438 0e31b8cd9753ed426d3cf0c0d326e794 370 SUPERFAMILY SSF50331 260 365 1.17E-13 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CH53_3438 0e31b8cd9753ed426d3cf0c0d326e794 370 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3438 0e31b8cd9753ed426d3cf0c0d326e794 370 Gene3D G3DSA:2.40.50.140 301 357 1.1E-11 T 18-10-2018 CH53_3438 0e31b8cd9753ed426d3cf0c0d326e794 370 Pfam PF08402 TOBE domain 294 365 4.7E-10 T 18-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 CH53_3438 0e31b8cd9753ed426d3cf0c0d326e794 370 Pfam PF00005 ABC transporter 43 184 5.0E-35 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_1612 cf46817997e1e76108387cf4d36016b6 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 4.5E-112 T 18-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CH53_1612 cf46817997e1e76108387cf4d36016b6 280 SUPERFAMILY SSF53335 9 279 4.51E-101 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_1612 cf46817997e1e76108387cf4d36016b6 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.966 T 18-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CH53_1612 cf46817997e1e76108387cf4d36016b6 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 18-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CH53_1612 cf46817997e1e76108387cf4d36016b6 280 Gene3D G3DSA:3.40.50.150 1 280 2.1E-120 T 18-10-2018 CH53_322 f1e6d782bd5998078f4a4b81e8abc667 336 Pfam PF01594 AI-2E family transporter 13 328 1.5E-10 T 18-10-2018 IPR002549 Transmembrane protein TqsA-like CH53_3304 cddd3408d8c47144223ce782f690b0a0 615 Pfam PF05170 AsmA family 3 196 2.0E-21 T 18-10-2018 IPR007844 AsmA CH53_3304 cddd3408d8c47144223ce782f690b0a0 615 Pfam PF05170 AsmA family 253 507 2.6E-20 T 18-10-2018 IPR007844 AsmA CH53_2074 6d5c43a242378806f3be2ad1b00a36b4 483 Pfam PF02386 Cation transport protein 37 477 1.9E-91 T 18-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CH53_2074 6d5c43a242378806f3be2ad1b00a36b4 483 PIRSF PIRSF006247 1 483 4.8E-182 T 18-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 CH53_2074 6d5c43a242378806f3be2ad1b00a36b4 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 3.4E-126 T 18-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 CH53_1890 318f8e7a40cb7052b143d53b994c490f 201 Pfam PF07305 Protein of unknown function (DUF1454) 10 200 2.2E-84 T 18-10-2018 IPR009918 Protein of unknown function DUF1454 CH53_4337 a2b9f0dc350efb2cf6e58003b448bdbc 167 SUPERFAMILY SSF47240 1 159 1.57E-56 T 18-10-2018 IPR009078 Ferritin-like superfamily CH53_4337 a2b9f0dc350efb2cf6e58003b448bdbc 167 Gene3D G3DSA:1.20.1260.10 1 166 1.2E-47 T 18-10-2018 IPR012347 Ferritin-like CH53_4337 a2b9f0dc350efb2cf6e58003b448bdbc 167 Pfam PF00210 Ferritin-like domain 8 143 1.8E-39 T 18-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CH53_2289 d10c16929146650558e847e48ff7dbb0 94 Pfam PF13997 YqjK-like protein 13 85 1.0E-31 T 18-10-2018 IPR025612 YqjK-like protein CH53_1176 ea7a90618d8078c6b7bcc4eecc03972a 81 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 74 3.4E-33 T 18-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain CH53_1176 ea7a90618d8078c6b7bcc4eecc03972a 81 SUPERFAMILY SSF47413 3 70 2.08E-27 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_1176 ea7a90618d8078c6b7bcc4eecc03972a 81 Gene3D G3DSA:1.10.260.40 1 69 7.9E-32 T 18-10-2018 CH53_1172 272b5e893110ba68451a32107b7cea37 160 Pfam PF10696 Protein of unknown function (DUF2501) 79 157 2.9E-29 T 18-10-2018 IPR019637 Protein of unknown function DUF2501 CH53_3215 84b2cc24ab113ef689a053dc2faae6c1 287 SUPERFAMILY SSF161098 88 274 2.09E-33 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3215 84b2cc24ab113ef689a053dc2faae6c1 287 Gene3D G3DSA:1.10.3720.10 87 284 2.8E-33 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3215 84b2cc24ab113ef689a053dc2faae6c1 287 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 16 282 5.5E-85 T 18-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 CH53_3215 84b2cc24ab113ef689a053dc2faae6c1 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 271 3.2E-16 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_1531 c20071ec3f603b1b681910eceffa33e4 394 Pfam PF07690 Major Facilitator Superfamily 15 320 2.3E-21 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_1531 c20071ec3f603b1b681910eceffa33e4 394 Hamap MF_01044 Protein TsgA [tsgA]. 1 390 28.828 T 18-10-2018 IPR023528 Major facilitator superfamily transporter, TsgA CH53_1531 c20071ec3f603b1b681910eceffa33e4 394 SUPERFAMILY SSF103473 4 389 2.88E-39 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_1531 c20071ec3f603b1b681910eceffa33e4 394 Gene3D G3DSA:1.20.1250.20 206 388 6.6E-21 T 18-10-2018 CH53_1531 c20071ec3f603b1b681910eceffa33e4 394 Gene3D G3DSA:1.20.1250.20 2 188 6.3E-16 T 18-10-2018 CH53_3589 75a4e361160e3ee43067b948e39f77b9 468 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 225 454 1.1E-63 T 18-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 CH53_3589 75a4e361160e3ee43067b948e39f77b9 468 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 106 1.2E-17 T 18-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 CH53_3149 0a8b6f22e83a7f9344545900519a28ff 45 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.8E-15 T 18-10-2018 IPR012994 Membrane bound YbgT-like CH53_3149 0a8b6f22e83a7f9344545900519a28ff 45 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 8.3E-20 T 18-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 CH53_3980 20b8bec85659ead04f680987a063024d 165 SUPERFAMILY SSF55729 4 159 1.1E-29 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_3980 20b8bec85659ead04f680987a063024d 165 Gene3D G3DSA:3.40.630.30 1 162 3.1E-38 T 18-10-2018 CH53_3980 20b8bec85659ead04f680987a063024d 165 Pfam PF13420 Acetyltransferase (GNAT) domain 7 154 2.7E-15 T 18-10-2018 CH53_870 b70fd8cba2e6d268180ccf71ef3e11f4 276 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 7 275 2.5E-104 T 18-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CH53_870 b70fd8cba2e6d268180ccf71ef3e11f4 276 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 6 275 2.5E-136 T 18-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CH53_1155 65250f8c6e1a460bfe02515074a86f6d 502 Pfam PF13520 Amino acid permease 9 442 7.1E-63 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_1155 65250f8c6e1a460bfe02515074a86f6d 502 Gene3D G3DSA:1.20.1740.10 3 492 4.8E-49 T 18-10-2018 CH53_1155 65250f8c6e1a460bfe02515074a86f6d 502 PIRSF PIRSF006060 1 502 2.5E-41 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_2927 5e0cd5e4201c03bf520cbaa410cf9819 190 SUPERFAMILY SSF52266 8 185 1.03E-50 T 18-10-2018 CH53_2927 5e0cd5e4201c03bf520cbaa410cf9819 190 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 9 19 - T 18-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 CH53_2927 5e0cd5e4201c03bf520cbaa410cf9819 190 Gene3D G3DSA:3.40.50.1110 6 190 2.2E-71 T 18-10-2018 IPR036514 SGNH hydrolase superfamily CH53_2927 5e0cd5e4201c03bf520cbaa410cf9819 190 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 12 170 2.6E-24 T 18-10-2018 IPR013830 SGNH hydrolase-type esterase domain CH53_2372 3596a669c3b213f3e6467463eda5a573 336 Pfam PF01618 MotA/TolQ/ExbB proton channel family 188 298 3.3E-34 T 18-10-2018 IPR002898 MotA/TolQ/ExbB proton channel CH53_2372 3596a669c3b213f3e6467463eda5a573 336 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 103 314 2.8E-95 T 18-10-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0016020|GO:0022857|GO:0055085 CH53_838 8cf0fb6cac6cf9aad0386f8b1ffa7e2d 205 Gene3D G3DSA:3.30.70.20 1 204 2.9E-53 T 18-10-2018 CH53_838 8cf0fb6cac6cf9aad0386f8b1ffa7e2d 205 Pfam PF13247 4Fe-4S dicluster domain 59 152 4.7E-27 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_838 8cf0fb6cac6cf9aad0386f8b1ffa7e2d 205 SUPERFAMILY SSF54862 3 200 3.98E-68 T 18-10-2018 CH53_838 8cf0fb6cac6cf9aad0386f8b1ffa7e2d 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0022 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH53_838 8cf0fb6cac6cf9aad0386f8b1ffa7e2d 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH53_838 8cf0fb6cac6cf9aad0386f8b1ffa7e2d 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 1.5E-78 T 18-10-2018 IPR014297 Dimethylsulphoxide reductase, chain B CH53_3334 a83f8168aa36bc271ec42d238f689f1c 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 170 3.1E-5 T 18-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CH53_3334 a83f8168aa36bc271ec42d238f689f1c 275 SUPERFAMILY SSF51735 2 267 1.39E-27 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3334 a83f8168aa36bc271ec42d238f689f1c 275 Gene3D G3DSA:3.40.50.720 1 271 3.7E-59 T 18-10-2018 CH53_2025 aa7d77d66c51b65655e7ebc816bb1ffe 127 Pfam PF10694 Protein of unknown function (DUF2500) 5 121 2.3E-36 T 18-10-2018 IPR019635 Protein of unknown function DUF2500 CH53_2025 aa7d77d66c51b65655e7ebc816bb1ffe 127 Gene3D G3DSA:2.40.50.660 35 127 2.9E-24 T 18-10-2018 CH53_1686 afd18dc76015717bea749024c8e1554d 87 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 81 1.2E-22 T 18-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ CH53_1686 afd18dc76015717bea749024c8e1554d 87 Pfam PF04221 RelB antitoxin 1 68 2.9E-21 T 18-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ CH53_1686 afd18dc76015717bea749024c8e1554d 87 Gene3D G3DSA:1.10.1220.10 1 46 8.6E-16 T 18-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CH53_1686 afd18dc76015717bea749024c8e1554d 87 PIRSF PIRSF003108 1 85 1.4E-27 T 18-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 CH53_358 9b9f3d032d2e1500ad48c919a8d40be4 445 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 444 29.941 T 18-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CH53_358 9b9f3d032d2e1500ad48c919a8d40be4 445 SUPERFAMILY SSF56322 24 442 4.71E-101 T 18-10-2018 IPR005801 ADC synthase GO:0009058 CH53_358 9b9f3d032d2e1500ad48c919a8d40be4 445 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 115 441 5.0E-107 T 18-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CH53_358 9b9f3d032d2e1500ad48c919a8d40be4 445 Gene3D G3DSA:3.60.120.10 1 445 7.1E-161 T 18-10-2018 IPR005801 ADC synthase GO:0009058 CH53_358 9b9f3d032d2e1500ad48c919a8d40be4 445 Pfam PF00425 chorismate binding enzyme 185 434 1.7E-67 T 18-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CH53_3192 1f8377dec9e9a089212f1b43a6c82715 86 Gene3D G3DSA:1.10.720.30 14 72 2.1E-32 T 18-10-2018 IPR036361 SAP domain superfamily CH53_3192 1f8377dec9e9a089212f1b43a6c82715 86 Pfam PF09905 DNA-binding protein VF530 7 68 1.0E-35 T 18-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 CH53_2548 60bd603c59c8b2fb5cc7a7b71f935c70 174 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 164 2.8E-59 T 18-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CH53_2548 60bd603c59c8b2fb5cc7a7b71f935c70 174 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 162 1.2E-57 T 18-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CH53_2548 60bd603c59c8b2fb5cc7a7b71f935c70 174 PIRSF PIRSF028301 2 174 4.8E-61 T 18-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CH53_3251 c843b09c28e1257cbd6def872c89be1a 466 SUPERFAMILY SSF55920 198 404 3.4E-15 T 18-10-2018 IPR036005 Creatinase/aminopeptidase-like CH53_3251 c843b09c28e1257cbd6def872c89be1a 466 Gene3D G3DSA:3.90.230.10 194 413 7.7E-11 T 18-10-2018 CH53_3251 c843b09c28e1257cbd6def872c89be1a 466 Gene3D G3DSA:3.40.350.10 19 144 2.0E-5 T 18-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CH53_3077 f75900003d6101d4474e754f7d1cad69 194 Gene3D G3DSA:2.30.110.10 24 152 1.3E-24 T 18-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CH53_3077 f75900003d6101d4474e754f7d1cad69 194 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 14 187 1.6E-66 T 18-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent CH53_3077 f75900003d6101d4474e754f7d1cad69 194 SUPERFAMILY SSF50475 19 176 2.48E-18 T 18-10-2018 CH53_3077 f75900003d6101d4474e754f7d1cad69 194 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 35 127 2.2E-12 T 18-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CH53_3530 1c333173f4c6ed95ed662a22314ac6f2 344 Pfam PF16884 N-terminal domain of oxidoreductase 9 115 2.7E-40 T 18-10-2018 CH53_3530 1c333173f4c6ed95ed662a22314ac6f2 344 SUPERFAMILY SSF51735 126 307 7.59E-45 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3530 1c333173f4c6ed95ed662a22314ac6f2 344 SMART SM00829 22 339 4.7E-6 T 18-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CH53_3530 1c333173f4c6ed95ed662a22314ac6f2 344 SUPERFAMILY SSF50129 7 146 2.83E-41 T 18-10-2018 IPR011032 GroES-like superfamily CH53_3530 1c333173f4c6ed95ed662a22314ac6f2 344 Pfam PF00107 Zinc-binding dehydrogenase 161 289 8.9E-18 T 18-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CH53_3530 1c333173f4c6ed95ed662a22314ac6f2 344 Gene3D G3DSA:3.40.50.720 130 311 3.1E-131 T 18-10-2018 CH53_3530 1c333173f4c6ed95ed662a22314ac6f2 344 Gene3D G3DSA:3.90.180.10 20 339 3.1E-131 T 18-10-2018 CH53_3328 afa3ce5bc3ed3295bc310fe1cfaded9e 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 4.0E-79 T 18-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CH53_3328 afa3ce5bc3ed3295bc310fe1cfaded9e 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.382 T 18-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CH53_3328 afa3ce5bc3ed3295bc310fe1cfaded9e 245 Gene3D G3DSA:3.20.20.70 1 245 2.8E-95 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_3328 afa3ce5bc3ed3295bc310fe1cfaded9e 245 Pfam PF00977 Histidine biosynthesis protein 1 233 4.9E-77 T 18-10-2018 IPR006062 Histidine biosynthesis GO:0000105 CH53_3328 afa3ce5bc3ed3295bc310fe1cfaded9e 245 SUPERFAMILY SSF51366 1 242 3.1E-66 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CH53_3876 d7122e767f77da913391ca831bfcbdb3 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 4.3E-39 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_3876 d7122e767f77da913391ca831bfcbdb3 306 SUPERFAMILY SSF161098 92 291 4.69E-21 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3876 d7122e767f77da913391ca831bfcbdb3 306 Gene3D G3DSA:1.10.3720.10 85 301 4.3E-21 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2172 51cb757a8a55a2613cab3e2edbb81199 369 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 176 362 1.8E-26 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_2172 51cb757a8a55a2613cab3e2edbb81199 369 Gene3D G3DSA:1.10.3720.10 146 366 3.6E-45 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2172 51cb757a8a55a2613cab3e2edbb81199 369 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 158 254 4.6E-20 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CH53_2172 51cb757a8a55a2613cab3e2edbb81199 369 SUPERFAMILY SSF161098 156 354 2.75E-37 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1636 ec3b0049156f967082608908833874f3 246 Gene3D G3DSA:3.40.50.300 3 241 3.0E-27 T 18-10-2018 CH53_1636 ec3b0049156f967082608908833874f3 246 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 240 4.9E-84 T 18-10-2018 IPR017746 Cellulose synthase operon protein BcsQ CH53_1636 ec3b0049156f967082608908833874f3 246 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 237 1.5E-106 T 18-10-2018 IPR017746 Cellulose synthase operon protein BcsQ CH53_1636 ec3b0049156f967082608908833874f3 246 SUPERFAMILY SSF52540 1 236 4.5E-28 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2686 c5879412cf946c70855ef288006dcfda 290 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 285 20.466 T 18-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CH53_2686 c5879412cf946c70855ef288006dcfda 290 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 280 8.0E-80 T 18-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CH53_2686 c5879412cf946c70855ef288006dcfda 290 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 18-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CH53_2686 c5879412cf946c70855ef288006dcfda 290 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 286 1.3E-105 T 18-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CH53_4165 9c843da5f31806a159f9e8a0ed3aa5b9 103 Pfam PF08748 Phage tail assembly chaperone 1 103 1.5E-24 T 18-10-2018 IPR014859 Phage tail assembly chaperone CH53_676 56881e21e91ee49bea3134d3afe93ac0 126 Gene3D G3DSA:3.90.470.20 1 126 2.7E-40 T 18-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CH53_676 56881e21e91ee49bea3134d3afe93ac0 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 3.8E-26 T 18-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CH53_676 56881e21e91ee49bea3134d3afe93ac0 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.272 T 18-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 CH53_676 56881e21e91ee49bea3134d3afe93ac0 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 92 3.0E-42 T 18-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 CH53_676 56881e21e91ee49bea3134d3afe93ac0 126 SUPERFAMILY SSF56214 3 125 6.8E-31 T 18-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CH53_676 56881e21e91ee49bea3134d3afe93ac0 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 8.1E-53 T 18-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 CH53_676 56881e21e91ee49bea3134d3afe93ac0 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 1.2E-37 T 18-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 CH53_2986 d64adadce481d7d4a3cac9720c6e846d 196 Pfam PF04055 Radical SAM superfamily 5 138 2.4E-11 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CH53_2986 d64adadce481d7d4a3cac9720c6e846d 196 Gene3D G3DSA:3.20.20.70 2 189 6.4E-34 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2986 d64adadce481d7d4a3cac9720c6e846d 196 SUPERFAMILY SSF102114 5 183 4.9E-12 T 18-10-2018 CH53_3344 8272144e15c9c4280b2b8bbe44d2bb28 312 Pfam PF02653 Branched-chain amino acid transport system / permease component 27 297 2.4E-41 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_1185 2f5f4500a06b9aec80b930a465df5019 157 SUPERFAMILY SSF53098 73 140 2.28E-7 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily CH53_1185 2f5f4500a06b9aec80b930a465df5019 157 Pfam PF13610 DDE domain 75 142 2.2E-26 T 18-10-2018 IPR032874 DDE domain CH53_4110 6efe0d4f8470f83f1eff2a7b4ef2ba44 355 Gene3D G3DSA:2.40.440.10 23 306 1.0E-85 T 18-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CH53_4110 6efe0d4f8470f83f1eff2a7b4ef2ba44 355 Pfam PF03734 L,D-transpeptidase catalytic domain 100 235 2.6E-20 T 18-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CH53_4110 6efe0d4f8470f83f1eff2a7b4ef2ba44 355 SUPERFAMILY SSF141523 98 235 3.14E-30 T 18-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CH53_4199 127d79e3599699c32f1e4672f8a594a6 95 Gene3D G3DSA:1.10.260.40 2 80 3.0E-8 T 18-10-2018 CH53_4199 127d79e3599699c32f1e4672f8a594a6 95 Pfam PF05269 Bacteriophage CII protein 1 89 7.8E-10 T 18-10-2018 IPR007933 Transcription activator CII GO:0003677|GO:0006355 CH53_1480 8b2fd8a4265bcf8859aa63a35e3fcda4 63 Gene3D G3DSA:1.10.287.310 1 63 8.5E-30 T 18-10-2018 CH53_1480 8b2fd8a4265bcf8859aa63a35e3fcda4 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.366 T 18-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1480 8b2fd8a4265bcf8859aa63a35e3fcda4 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 3.4E-22 T 18-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1480 8b2fd8a4265bcf8859aa63a35e3fcda4 63 SUPERFAMILY SSF46561 1 61 1.03E-21 T 18-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1480 8b2fd8a4265bcf8859aa63a35e3fcda4 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.3E-22 T 18-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1100 0e6c60ff843dca7785855e87b1a82179 344 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 8 342 3.2E-98 T 18-10-2018 CH53_1100 0e6c60ff843dca7785855e87b1a82179 344 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 1 344 9.0E-224 T 18-10-2018 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 CH53_1100 0e6c60ff843dca7785855e87b1a82179 344 Hamap MF_01532 L-rhamnose-proton symporter [rhaT]. 1 344 43.151 T 18-10-2018 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 CH53_2542 0bd3b315c8868b21d7c2b9210038fe96 626 PIRSF PIRSF028304 1 626 2.2E-158 T 18-10-2018 IPR010272 Type VI secretion system, TssF-like CH53_2542 0bd3b315c8868b21d7c2b9210038fe96 626 Pfam PF05947 Type VI secretion system, TssF 6 623 9.6E-202 T 18-10-2018 IPR010272 Type VI secretion system, TssF-like CH53_2542 0bd3b315c8868b21d7c2b9210038fe96 626 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 625 7.6E-195 T 18-10-2018 IPR010272 Type VI secretion system, TssF-like CH53_180 eec6578631576ccbc2e7b63d200c9c49 319 Pfam PF04393 Protein of unknown function (DUF535) 33 310 1.0E-99 T 18-10-2018 IPR007488 Protein of unknown function DUF535 CH53_4277 c6752ab900e318e92bc1d70867674652 165 Pfam PF13185 GAF domain 39 142 2.8E-9 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_4277 c6752ab900e318e92bc1d70867674652 165 Gene3D G3DSA:3.30.450.40 1 165 2.9E-66 T 18-10-2018 IPR029016 GAF-like domain superfamily CH53_4277 c6752ab900e318e92bc1d70867674652 165 SMART SM00065 9 161 0.0045 T 18-10-2018 IPR003018 GAF domain GO:0005515 CH53_4277 c6752ab900e318e92bc1d70867674652 165 SUPERFAMILY SSF55781 2 148 4.91E-41 T 18-10-2018 CH53_617 ad6ce12953ac8f068407c33b907ee8e3 146 Pfam PF13673 Acetyltransferase (GNAT) domain 48 128 9.1E-14 T 18-10-2018 IPR000182 GNAT domain CH53_617 ad6ce12953ac8f068407c33b907ee8e3 146 Gene3D G3DSA:3.40.630.30 1 139 1.0E-20 T 18-10-2018 CH53_617 ad6ce12953ac8f068407c33b907ee8e3 146 SUPERFAMILY SSF55729 1 139 2.13E-22 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_3826 e542efe22557a8fd7e3c7fe658906f2c 360 Gene3D G3DSA:1.10.8.350 73 238 1.5E-87 T 18-10-2018 CH53_3826 e542efe22557a8fd7e3c7fe658906f2c 360 Pfam PF13406 Transglycosylase SLT domain 63 356 2.0E-106 T 18-10-2018 IPR031304 Transglycosylase SLT domain 2 CH53_3826 e542efe22557a8fd7e3c7fe658906f2c 360 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 62 359 3.4E-120 T 18-10-2018 IPR011970 Lytic murein transglycosylase CH53_3826 e542efe22557a8fd7e3c7fe658906f2c 360 Gene3D G3DSA:1.10.530.10 105 355 1.5E-87 T 18-10-2018 CH53_3826 e542efe22557a8fd7e3c7fe658906f2c 360 SUPERFAMILY SSF53955 53 358 8.72E-100 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily CH53_108 21e5714b707e9425ecf3b1b07b704ff0 227 Hamap MF_00789 UPF0319 protein YccT [yccT]. 4 223 25.643 T 18-10-2018 IPR018635 Uncharacterised protein family UPF0319 CH53_108 21e5714b707e9425ecf3b1b07b704ff0 227 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 220 2.5E-45 T 18-10-2018 IPR018635 Uncharacterised protein family UPF0319 CH53_463 2900bf98a448c998139f640fe006795f 105 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 4 95 9.8E-35 T 18-10-2018 IPR024476 Protein of unknown function DUF3861 CH53_463 2900bf98a448c998139f640fe006795f 105 Gene3D G3DSA:1.10.225.20 2 96 3.1E-30 T 18-10-2018 CH53_2578 786ebbd4114e8a375c58284b9cd069b0 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 31.213 T 18-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CH53_2578 786ebbd4114e8a375c58284b9cd069b0 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 6.7E-70 T 18-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CH53_2578 786ebbd4114e8a375c58284b9cd069b0 239 SUPERFAMILY SSF53335 16 237 8.12E-42 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_2578 786ebbd4114e8a375c58284b9cd069b0 239 Gene3D G3DSA:3.40.50.150 30 239 2.2E-72 T 18-10-2018 CH53_2578 786ebbd4114e8a375c58284b9cd069b0 239 Pfam PF02390 Putative methyltransferase 64 233 1.8E-60 T 18-10-2018 CH53_4281 8883bc2988218c4e5a231d4257c86ed7 480 Gene3D G3DSA:1.20.1250.20 279 479 3.6E-19 T 18-10-2018 CH53_4281 8883bc2988218c4e5a231d4257c86ed7 480 SUPERFAMILY SSF103473 20 477 2.75E-58 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_4281 8883bc2988218c4e5a231d4257c86ed7 480 Gene3D G3DSA:1.20.1720.10 21 260 2.5E-45 T 18-10-2018 CH53_4281 8883bc2988218c4e5a231d4257c86ed7 480 Pfam PF07690 Major Facilitator Superfamily 30 423 7.9E-48 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_4281 8883bc2988218c4e5a231d4257c86ed7 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 115 135 5.2E-13 T 18-10-2018 CH53_4281 8883bc2988218c4e5a231d4257c86ed7 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 169 5.2E-13 T 18-10-2018 CH53_4281 8883bc2988218c4e5a231d4257c86ed7 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 414 433 5.2E-13 T 18-10-2018 CH53_4281 8883bc2988218c4e5a231d4257c86ed7 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 24 48 5.2E-13 T 18-10-2018 CH53_928 1bb25dc3fd94295585e38ab29ee5aed4 349 Gene3D G3DSA:3.30.2350.20 16 336 1.1E-120 T 18-10-2018 CH53_928 1bb25dc3fd94295585e38ab29ee5aed4 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 8 166 1.8E-41 T 18-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_928 1bb25dc3fd94295585e38ab29ee5aed4 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 189 336 4.4E-17 T 18-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_928 1bb25dc3fd94295585e38ab29ee5aed4 349 SUPERFAMILY SSF55120 3 339 4.46E-105 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_928 1bb25dc3fd94295585e38ab29ee5aed4 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 76 89 - T 18-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 CH53_928 1bb25dc3fd94295585e38ab29ee5aed4 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 4 341 28.251 T 18-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_928 1bb25dc3fd94295585e38ab29ee5aed4 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 3 340 3.7E-82 T 18-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CH53_928 1bb25dc3fd94295585e38ab29ee5aed4 349 Gene3D G3DSA:3.30.2340.10 166 300 1.1E-120 T 18-10-2018 CH53_79 e75cd536e0f5ae17d7143fbe1b99cb21 450 Pfam PF11329 Protein of unknown function (DUF3131) 66 429 6.1E-142 T 18-10-2018 IPR021478 Protein of unknown function DUF3131 CH53_3199 d2051f53d7ef64fa1063ccad56bff7b4 396 Pfam PF12698 ABC-2 family transporter protein 49 388 3.0E-42 T 18-10-2018 CH53_1845 aca93466d921069b49ba8a51ba677861 114 ProDom PD070475 P4 PHAGE PROPHAGE-DERIVED CNR-LIKE ORF106 T2655 9 104 2.0E-15 T 18-10-2018 IPR035317 Protein of unknown function DUF5375 CH53_1845 aca93466d921069b49ba8a51ba677861 114 Pfam PF17345 Family of unknown function (DUF5375) 9 105 1.7E-20 T 18-10-2018 IPR035317 Protein of unknown function DUF5375 CH53_118 b9c33ea8f62bdfc9e8baaf81ccebed66 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.538 T 18-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CH53_118 b9c33ea8f62bdfc9e8baaf81ccebed66 172 SUPERFAMILY SSF54637 3 169 1.08E-56 T 18-10-2018 IPR029069 HotDog domain superfamily CH53_118 b9c33ea8f62bdfc9e8baaf81ccebed66 172 Gene3D G3DSA:3.10.129.10 1 172 4.1E-65 T 18-10-2018 CH53_118 b9c33ea8f62bdfc9e8baaf81ccebed66 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 171 1.9E-93 T 18-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CH53_118 b9c33ea8f62bdfc9e8baaf81ccebed66 172 Pfam PF07977 FabA-like domain 29 158 1.1E-53 T 18-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CH53_1171 12b7f305769428e1c0394a4647fcad0f 318 PIRSF PIRSF037004 1 318 5.2E-128 T 18-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 CH53_1171 12b7f305769428e1c0394a4647fcad0f 318 Pfam PF08349 Protein of unknown function (DUF1722) 192 309 5.1E-42 T 18-10-2018 IPR013560 Domain of unknown function DUF1722 CH53_1171 12b7f305769428e1c0394a4647fcad0f 318 Pfam PF04463 Protein of unknown function (DUF523) 7 149 1.6E-36 T 18-10-2018 IPR007553 Domain of unknown function DUF523 CH53_1722 f6f1a15e93f51d830197866e1cd2f586 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 93 1.3E-22 T 18-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CH53_1722 f6f1a15e93f51d830197866e1cd2f586 100 Gene3D G3DSA:3.40.50.2300 1 100 1.6E-37 T 18-10-2018 CH53_1722 f6f1a15e93f51d830197866e1cd2f586 100 SUPERFAMILY SSF52794 1 99 3.92E-35 T 18-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CH53_2561 556a5075f8d7720f2e5098b75ab33106 203 SUPERFAMILY SSF46894 142 199 4.76E-13 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_2561 556a5075f8d7720f2e5098b75ab33106 203 Gene3D G3DSA:1.10.10.10 140 202 5.9E-13 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2561 556a5075f8d7720f2e5098b75ab33106 203 SMART SM00421 146 203 8.3E-9 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2561 556a5075f8d7720f2e5098b75ab33106 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 192 1.0E-11 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2561 556a5075f8d7720f2e5098b75ab33106 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.4E-8 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2561 556a5075f8d7720f2e5098b75ab33106 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.4E-8 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2561 556a5075f8d7720f2e5098b75ab33106 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.4E-8 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_2561 556a5075f8d7720f2e5098b75ab33106 203 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_484 2e9ed1acdc0798f9b05178287c5509d9 528 Gene3D G3DSA:1.10.3720.10 275 526 3.5E-29 T 18-10-2018 IPR035906 MetI-like superfamily CH53_484 2e9ed1acdc0798f9b05178287c5509d9 528 Gene3D G3DSA:1.10.3720.10 27 265 7.2E-39 T 18-10-2018 IPR035906 MetI-like superfamily CH53_484 2e9ed1acdc0798f9b05178287c5509d9 528 SUPERFAMILY SSF161098 283 519 1.96E-35 T 18-10-2018 IPR035906 MetI-like superfamily CH53_484 2e9ed1acdc0798f9b05178287c5509d9 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 253 2.7E-6 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_484 2e9ed1acdc0798f9b05178287c5509d9 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 345 524 3.4E-18 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_484 2e9ed1acdc0798f9b05178287c5509d9 528 SUPERFAMILY SSF161098 27 254 1.53E-35 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2598 807844dd0fd9c0ea721cdc549a6ba571 143 Pfam PF04143 Sulphur transport 11 132 2.0E-6 T 18-10-2018 IPR007272 Sulphur transport domain CH53_2384 8bb15f7256eab9d56e00692d98e54edb 440 Pfam PF13629 Pilus formation protein N terminal region 33 102 2.6E-11 T 18-10-2018 IPR032789 Pilus formation protein, N-terminal CH53_2384 8bb15f7256eab9d56e00692d98e54edb 440 Pfam PF00263 Bacterial type II and III secretion system protein 235 392 1.7E-39 T 18-10-2018 IPR004846 Type II/III secretion system GO:0009306 CH53_2384 8bb15f7256eab9d56e00692d98e54edb 440 PRINTS PR00811 Bacterial general secretion pathway protein D signature 357 375 1.1E-5 T 18-10-2018 IPR001775 GspD/PilQ family CH53_2384 8bb15f7256eab9d56e00692d98e54edb 440 PRINTS PR00811 Bacterial general secretion pathway protein D signature 185 195 1.1E-5 T 18-10-2018 IPR001775 GspD/PilQ family CH53_4085 eb178dc993d9b50f93cad34bc781f401 78 Pfam PF07869 Protein of unknown function (DUF1656) 19 69 2.2E-13 T 18-10-2018 IPR012451 Protein of unknown function DUF1656 CH53_1365 94d335126c7735af822a03ef3f518d20 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 5.2E-29 T 18-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CH53_1365 94d335126c7735af822a03ef3f518d20 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 18-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CH53_1365 94d335126c7735af822a03ef3f518d20 97 PRINTS PR00297 10kDa chaperonin signature 25 46 2.1E-27 T 18-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CH53_1365 94d335126c7735af822a03ef3f518d20 97 PRINTS PR00297 10kDa chaperonin signature 3 18 2.1E-27 T 18-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CH53_1365 94d335126c7735af822a03ef3f518d20 97 PRINTS PR00297 10kDa chaperonin signature 60 72 2.1E-27 T 18-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CH53_1365 94d335126c7735af822a03ef3f518d20 97 PRINTS PR00297 10kDa chaperonin signature 82 95 2.1E-27 T 18-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CH53_1365 94d335126c7735af822a03ef3f518d20 97 SUPERFAMILY SSF50129 1 96 5.56E-31 T 18-10-2018 IPR011032 GroES-like superfamily CH53_1365 94d335126c7735af822a03ef3f518d20 97 Gene3D G3DSA:2.30.33.40 1 97 1.2E-36 T 18-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 CH53_1365 94d335126c7735af822a03ef3f518d20 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.817 T 18-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CH53_1365 94d335126c7735af822a03ef3f518d20 97 SMART SM00883 2 95 5.7E-49 T 18-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CH53_3156 d5d376f7f75164d1d9c41d286b7664bb 168 ProSitePatterns PS01068 OmpA-like domain. 100 144 - T 18-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CH53_3156 d5d376f7f75164d1d9c41d286b7664bb 168 Gene3D G3DSA:3.30.1330.60 39 168 5.8E-48 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_3156 d5d376f7f75164d1d9c41d286b7664bb 168 Pfam PF00691 OmpA family 67 162 5.1E-21 T 18-10-2018 IPR006665 OmpA-like domain CH53_3156 d5d376f7f75164d1d9c41d286b7664bb 168 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 66 168 3.9E-46 T 18-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 CH53_3156 d5d376f7f75164d1d9c41d286b7664bb 168 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 168 31.775 T 18-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 CH53_3156 d5d376f7f75164d1d9c41d286b7664bb 168 PRINTS PR01021 OMPA domain signature 113 129 2.9E-17 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CH53_3156 d5d376f7f75164d1d9c41d286b7664bb 168 PRINTS PR01021 OMPA domain signature 68 90 2.9E-17 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CH53_3156 d5d376f7f75164d1d9c41d286b7664bb 168 PRINTS PR01021 OMPA domain signature 98 113 2.9E-17 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CH53_3156 d5d376f7f75164d1d9c41d286b7664bb 168 SUPERFAMILY SSF103088 56 167 2.22E-34 T 18-10-2018 IPR036737 OmpA-like domain superfamily CH53_1368 8e20bb2fffa9b225e6f5b2721479408e 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 4.1E-141 T 18-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CH53_1368 8e20bb2fffa9b225e6f5b2721479408e 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 2.6E-194 T 18-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CH53_1368 8e20bb2fffa9b225e6f5b2721479408e 433 PIRSF PIRSF004539 1 433 4.8E-174 T 18-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CH53_1700 73345739fa426e56dbadc3cc35dbd645 720 SUPERFAMILY SSF55729 605 717 3.89E-6 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_1700 73345739fa426e56dbadc3cc35dbd645 720 Gene3D G3DSA:3.40.630.30 576 720 4.9E-6 T 18-10-2018 CH53_1700 73345739fa426e56dbadc3cc35dbd645 720 SUPERFAMILY SSF49695 30 120 4.24E-9 T 18-10-2018 IPR011024 Gamma-crystallin-like CH53_1700 73345739fa426e56dbadc3cc35dbd645 720 Gene3D G3DSA:2.60.20.10 29 121 7.3E-17 T 18-10-2018 CH53_2318 580a52465599a4d36711973fa5a81242 115 Gene3D G3DSA:3.30.70.100 1 105 3.1E-6 T 18-10-2018 CH53_2318 580a52465599a4d36711973fa5a81242 115 Pfam PF07978 NIPSNAP 7 94 1.2E-7 T 18-10-2018 IPR012577 NIPSNAP CH53_2318 580a52465599a4d36711973fa5a81242 115 SUPERFAMILY SSF54909 3 94 1.72E-16 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel CH53_1469 e34d84d1e046af74aec80a2293155302 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 18-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CH53_1469 e34d84d1e046af74aec80a2293155302 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.213 T 18-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CH53_1469 e34d84d1e046af74aec80a2293155302 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.2E-30 T 18-10-2018 IPR021131 Ribosomal protein L18e/L15P CH53_1469 e34d84d1e046af74aec80a2293155302 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 5.8E-51 T 18-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1469 e34d84d1e046af74aec80a2293155302 144 SUPERFAMILY SSF52080 4 143 1.7E-46 T 18-10-2018 IPR036227 Ribosomal L18e/L15P superfamily CH53_1469 e34d84d1e046af74aec80a2293155302 144 Gene3D G3DSA:3.100.10.10 70 144 2.1E-11 T 18-10-2018 CH53_447 df734f01b46249430bc2083e5d78573c 164 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 32.157 T 18-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 CH53_447 df734f01b46249430bc2083e5d78573c 164 Gene3D G3DSA:2.40.50.140 30 143 6.6E-43 T 18-10-2018 CH53_447 df734f01b46249430bc2083e5d78573c 164 SUPERFAMILY SSF82093 30 143 1.44E-40 T 18-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 CH53_447 df734f01b46249430bc2083e5d78573c 164 Pfam PF03100 CcmE 4 137 1.3E-44 T 18-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 CH53_19 f83b9851d6a91b0b54742ea3325c4564 373 SUPERFAMILY SSF51905 2 370 2.56E-47 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_19 f83b9851d6a91b0b54742ea3325c4564 373 Pfam PF01266 FAD dependent oxidoreductase 4 350 1.0E-46 T 18-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CH53_19 f83b9851d6a91b0b54742ea3325c4564 373 SUPERFAMILY SSF54373 213 313 4.71E-19 T 18-10-2018 CH53_19 f83b9851d6a91b0b54742ea3325c4564 373 Gene3D G3DSA:3.30.9.10 59 313 3.2E-129 T 18-10-2018 CH53_19 f83b9851d6a91b0b54742ea3325c4564 373 Gene3D G3DSA:3.50.50.60 4 367 3.2E-129 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CH53_19 f83b9851d6a91b0b54742ea3325c4564 373 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 371 76.409 T 18-10-2018 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 CH53_1305 b3360754710dd379ef0bf3b38fe78dd0 87 Gene3D G3DSA:3.30.1660.10 21 87 4.0E-20 T 18-10-2018 IPR025543 Dodecin-like CH53_1305 b3360754710dd379ef0bf3b38fe78dd0 87 Pfam PF07338 Protein of unknown function (DUF1471) 34 87 5.6E-19 T 18-10-2018 IPR010854 Domain of unknown function DUF1471 CH53_1305 b3360754710dd379ef0bf3b38fe78dd0 87 SUPERFAMILY SSF159871 2 87 1.06E-24 T 18-10-2018 IPR036275 YdgH-like superfamily CH53_866 4305f52282bbd297015fd0fa1cb36fd6 319 Pfam PF04198 Putative sugar-binding domain 58 315 2.6E-70 T 18-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 CH53_866 4305f52282bbd297015fd0fa1cb36fd6 319 Gene3D G3DSA:1.10.10.60 1 51 1.7E-23 T 18-10-2018 CH53_866 4305f52282bbd297015fd0fa1cb36fd6 319 SUPERFAMILY SSF100950 60 317 1.0E-62 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_866 4305f52282bbd297015fd0fa1cb36fd6 319 SUPERFAMILY SSF46785 17 53 8.43E-5 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_866 4305f52282bbd297015fd0fa1cb36fd6 319 Gene3D G3DSA:3.40.50.1360 52 316 2.3E-82 T 18-10-2018 CH53_1059 723cdfe67519c38aa4dfab11146f8671 125 Pfam PF04379 ApaG domain 18 102 1.5E-33 T 18-10-2018 IPR007474 ApaG domain CH53_1059 723cdfe67519c38aa4dfab11146f8671 125 Gene3D G3DSA:2.60.40.1470 1 125 2.3E-45 T 18-10-2018 IPR036767 ApaG domain superfamily CH53_1059 723cdfe67519c38aa4dfab11146f8671 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 31.717 T 18-10-2018 IPR023065 Uncharacterised protein family ApaG CH53_1059 723cdfe67519c38aa4dfab11146f8671 125 SUPERFAMILY SSF110069 5 125 4.45E-47 T 18-10-2018 IPR036767 ApaG domain superfamily CH53_3094 0b78cd6f33e4d423ed0fc5936c4f91f7 250 SUPERFAMILY SSF56784 1 247 6.98E-66 T 18-10-2018 IPR036412 HAD-like superfamily CH53_3094 0b78cd6f33e4d423ed0fc5936c4f91f7 250 Gene3D G3DSA:3.40.50.1000 71 174 2.2E-85 T 18-10-2018 IPR023214 HAD superfamily CH53_3094 0b78cd6f33e4d423ed0fc5936c4f91f7 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 5.2E-65 T 18-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CH53_3094 0b78cd6f33e4d423ed0fc5936c4f91f7 250 PIRSF PIRSF000915 1 113 1.3E-23 T 18-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CH53_3094 0b78cd6f33e4d423ed0fc5936c4f91f7 250 PIRSF PIRSF000915 107 250 4.5E-28 T 18-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CH53_3094 0b78cd6f33e4d423ed0fc5936c4f91f7 250 Pfam PF13242 HAD-hyrolase-like 174 246 1.1E-20 T 18-10-2018 CH53_3094 0b78cd6f33e4d423ed0fc5936c4f91f7 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 2.0E-25 T 18-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CH53_3094 0b78cd6f33e4d423ed0fc5936c4f91f7 250 Gene3D G3DSA:3.40.50.1000 6 232 2.2E-85 T 18-10-2018 IPR023214 HAD superfamily CH53_2865 58838589d72a1ca4ea45533b99c71915 628 SUPERFAMILY SSF109998 39 240 1.83E-36 T 18-10-2018 IPR027304 Trigger factor/SurA domain superfamily CH53_2865 58838589d72a1ca4ea45533b99c71915 628 Gene3D G3DSA:3.10.50.40 266 366 1.6E-31 T 18-10-2018 CH53_2865 58838589d72a1ca4ea45533b99c71915 628 Pfam PF13624 SurA N-terminal domain 1 166 5.2E-52 T 18-10-2018 CH53_2865 58838589d72a1ca4ea45533b99c71915 628 Pfam PF13145 PPIC-type PPIASE domain 250 370 2.6E-23 T 18-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 CH53_2865 58838589d72a1ca4ea45533b99c71915 628 SUPERFAMILY SSF54534 225 357 9.81E-24 T 18-10-2018 CH53_2037 f649e06953cc1c485dc6d196f88626ee 233 SMART SM00382 26 212 1.4E-4 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2037 f649e06953cc1c485dc6d196f88626ee 233 Pfam PF00005 ABC transporter 17 161 2.7E-33 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2037 f649e06953cc1c485dc6d196f88626ee 233 Gene3D G3DSA:3.40.50.300 1 233 5.0E-65 T 18-10-2018 CH53_2037 f649e06953cc1c485dc6d196f88626ee 233 SUPERFAMILY SSF52540 2 230 1.04E-60 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2037 f649e06953cc1c485dc6d196f88626ee 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_2037 f649e06953cc1c485dc6d196f88626ee 233 PIRSF PIRSF039137 1 233 5.1E-102 T 18-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 CH53_548 40e3ff3105a516ace5e51cb78d4aaf60 141 Pfam PF00583 Acetyltransferase (GNAT) family 22 123 3.1E-17 T 18-10-2018 IPR000182 GNAT domain CH53_548 40e3ff3105a516ace5e51cb78d4aaf60 141 SUPERFAMILY SSF55729 1 130 5.88E-28 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_548 40e3ff3105a516ace5e51cb78d4aaf60 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 54.714 T 18-10-2018 IPR023072 Acetyltransferase, YpeA GO:0016747 CH53_548 40e3ff3105a516ace5e51cb78d4aaf60 141 Gene3D G3DSA:3.40.630.30 1 141 7.7E-42 T 18-10-2018 CH53_2211 d567ba8e776aa19cb8f3a743aa67bb86 654 Pfam PF04632 Fusaric acid resistance protein family 8 649 3.7E-170 T 18-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 CH53_2211 d567ba8e776aa19cb8f3a743aa67bb86 654 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 1 651 56.221 T 18-10-2018 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0046942 CH53_478 ae03f859d9719cf6aa57bdf80c3434ca 503 Gene3D G3DSA:1.20.1250.20 274 494 1.8E-14 T 18-10-2018 CH53_478 ae03f859d9719cf6aa57bdf80c3434ca 503 Pfam PF07690 Major Facilitator Superfamily 12 403 1.5E-37 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_478 ae03f859d9719cf6aa57bdf80c3434ca 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 394 413 4.4E-10 T 18-10-2018 CH53_478 ae03f859d9719cf6aa57bdf80c3434ca 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 331 351 4.4E-10 T 18-10-2018 CH53_478 ae03f859d9719cf6aa57bdf80c3434ca 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 70 92 4.4E-10 T 18-10-2018 CH53_478 ae03f859d9719cf6aa57bdf80c3434ca 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 157 181 4.4E-10 T 18-10-2018 CH53_478 ae03f859d9719cf6aa57bdf80c3434ca 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 4.4E-10 T 18-10-2018 CH53_478 ae03f859d9719cf6aa57bdf80c3434ca 503 SUPERFAMILY SSF103473 3 495 2.49E-60 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_478 ae03f859d9719cf6aa57bdf80c3434ca 503 Gene3D G3DSA:1.20.1720.10 7 240 4.1E-33 T 18-10-2018 CH53_459 413a36be42994f1fbb4b6e2c6436180c 145 ProDom PD082093 YAFO SIMILAR YAFO-LIKE UNCHARACTERIZED PROTEIN ESCHERICHIA ECS0260 COLI 30 141 2.0E-9 T 18-10-2018 IPR020353 mRNA interferase toxin YafO CH53_459 413a36be42994f1fbb4b6e2c6436180c 145 Pfam PF13957 Toxin YafO, type II toxin-antitoxin system 37 141 1.1E-21 T 18-10-2018 IPR020353 mRNA interferase toxin YafO CH53_831 c844994fffea16dada42cf0c2138060c 371 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 339 1.4E-49 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_4066 dcbd9e6a0f1ef322babdf369e30658b7 550 PIRSF PIRSF002741 1 544 5.2E-99 T 18-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CH53_4066 dcbd9e6a0f1ef322babdf369e30658b7 550 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 110 - T 18-10-2018 IPR023765 Solute-binding protein family 5, conserved site CH53_4066 dcbd9e6a0f1ef322babdf369e30658b7 550 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 461 2.5E-88 T 18-10-2018 IPR000914 Solute-binding protein family 5 domain CH53_4066 dcbd9e6a0f1ef322babdf369e30658b7 550 Gene3D G3DSA:3.40.190.10 223 531 1.2E-150 T 18-10-2018 CH53_4066 dcbd9e6a0f1ef322babdf369e30658b7 550 SUPERFAMILY SSF53850 40 540 3.8E-138 T 18-10-2018 CH53_4066 dcbd9e6a0f1ef322babdf369e30658b7 550 Gene3D G3DSA:3.10.105.10 302 519 1.2E-150 T 18-10-2018 CH53_4066 dcbd9e6a0f1ef322babdf369e30658b7 550 Gene3D G3DSA:3.90.76.10 50 222 1.2E-150 T 18-10-2018 CH53_979 1ea2076ec3595b588606bd008613d231 436 Gene3D G3DSA:3.20.20.370 179 419 1.3E-59 T 18-10-2018 CH53_979 1ea2076ec3595b588606bd008613d231 436 SUPERFAMILY SSF88713 205 402 1.86E-28 T 18-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CH53_979 1ea2076ec3595b588606bd008613d231 436 Pfam PF01522 Polysaccharide deacetylase 242 380 8.4E-18 T 18-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CH53_785 acd7543942ebbd824d5935b74abb5737 271 Pfam PF01553 Acyltransferase 86 196 6.7E-14 T 18-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CH53_785 acd7543942ebbd824d5935b74abb5737 271 SUPERFAMILY SSF69593 59 244 7.59E-23 T 18-10-2018 CH53_785 acd7543942ebbd824d5935b74abb5737 271 SMART SM00563 99 207 2.3E-15 T 18-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CH53_2785 decc1ccc747218199ee519b2d963f33d 251 Pfam PF03734 L,D-transpeptidase catalytic domain 48 163 2.5E-7 T 18-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CH53_2785 decc1ccc747218199ee519b2d963f33d 251 SUPERFAMILY SSF141523 45 163 2.88E-9 T 18-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CH53_584 2973c5eace6f67f1e18ad43ebdb17d42 208 Gene3D G3DSA:3.40.50.2020 1 208 2.8E-72 T 18-10-2018 CH53_584 2973c5eace6f67f1e18ad43ebdb17d42 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 43.761 T 18-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CH53_584 2973c5eace6f67f1e18ad43ebdb17d42 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 2.3E-89 T 18-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CH53_584 2973c5eace6f67f1e18ad43ebdb17d42 208 SUPERFAMILY SSF53271 4 206 5.77E-67 T 18-10-2018 IPR029057 Phosphoribosyltransferase-like CH53_584 2973c5eace6f67f1e18ad43ebdb17d42 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 7.2E-64 T 18-10-2018 CH53_3021 48f7489573464c78676277c37c4c200d 70 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 45 4.6E-5 T 18-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CH53_3021 48f7489573464c78676277c37c4c200d 70 SUPERFAMILY SSF52833 3 43 4.26E-9 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_3021 48f7489573464c78676277c37c4c200d 70 Gene3D G3DSA:3.40.30.10 1 59 2.1E-11 T 18-10-2018 CH53_1595 8937a36e65535a16db77540ab94a5ee3 639 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 8 332 2.5E-124 T 18-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 CH53_1595 8937a36e65535a16db77540ab94a5ee3 639 SUPERFAMILY SSF53613 8 331 1.23E-69 T 18-10-2018 IPR029056 Ribokinase-like CH53_1595 8937a36e65535a16db77540ab94a5ee3 639 Gene3D G3DSA:2.20.150.10 16 111 9.9E-90 T 18-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 CH53_1595 8937a36e65535a16db77540ab94a5ee3 639 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 276 289 - T 18-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CH53_1595 8937a36e65535a16db77540ab94a5ee3 639 Pfam PF00294 pfkB family carbohydrate kinase 9 324 2.3E-44 T 18-10-2018 IPR011611 Carbohydrate kinase PfkB CH53_1595 8937a36e65535a16db77540ab94a5ee3 639 Gene3D G3DSA:3.40.1190.20 11 314 9.9E-90 T 18-10-2018 IPR029056 Ribokinase-like CH53_1595 8937a36e65535a16db77540ab94a5ee3 639 Gene3D G3DSA:3.20.20.70 343 637 4.2E-57 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_1595 8937a36e65535a16db77540ab94a5ee3 639 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 327 635 9.4E-144 T 18-10-2018 IPR018659 Protein of unknown function DUF2090 CH53_616 db8b868297337858875c686bc23ecb42 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 8.0E-102 T 18-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CH53_616 db8b868297337858875c686bc23ecb42 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 1.7E-92 T 18-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CH53_616 db8b868297337858875c686bc23ecb42 266 SUPERFAMILY SSF53613 5 266 4.37E-78 T 18-10-2018 IPR029056 Ribokinase-like CH53_616 db8b868297337858875c686bc23ecb42 266 Gene3D G3DSA:3.40.1190.20 1 266 6.2E-101 T 18-10-2018 IPR029056 Ribokinase-like CH53_777 dad90780a7b5232a30a884eb83c62cbe 201 Gene3D G3DSA:2.50.20.10 19 199 9.5E-23 T 18-10-2018 CH53_777 dad90780a7b5232a30a884eb83c62cbe 201 SUPERFAMILY SSF89392 21 189 3.14E-20 T 18-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CH53_777 dad90780a7b5232a30a884eb83c62cbe 201 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 34 188 6.8E-9 T 18-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CH53_1169 0516ed83078fb6e4ecc819dd404339af 143 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 10 137 2.9E-18 T 18-10-2018 IPR009936 Protein of unknown function DUF1468 CH53_1507 868cb733c5de634671693828d272a9b2 331 Gene3D G3DSA:3.90.550.10 4 204 8.6E-42 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_1507 868cb733c5de634671693828d272a9b2 331 Pfam PF00535 Glycosyl transferase family 2 7 128 6.2E-28 T 18-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CH53_1507 868cb733c5de634671693828d272a9b2 331 SUPERFAMILY SSF53448 6 240 2.91E-48 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_1690 34b411da3b0b9c570e69443619412cb6 202 Pfam PF01810 LysE type translocator 12 194 6.3E-13 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CH53_1586 cf937d4a8f485f0e3660bda6b26f977e 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 191 2.7E-31 T 18-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CH53_1586 cf937d4a8f485f0e3660bda6b26f977e 197 Pfam PF01914 MarC family integral membrane protein 2 193 1.1E-58 T 18-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CH53_776 38a2d276c488a6607dcfaf43f0c274d3 771 SUPERFAMILY SSF82866 608 764 1.11E-18 T 18-10-2018 CH53_776 38a2d276c488a6607dcfaf43f0c274d3 771 SUPERFAMILY SSF82866 225 398 4.19E-20 T 18-10-2018 CH53_776 38a2d276c488a6607dcfaf43f0c274d3 771 Pfam PF03176 MMPL family 237 397 7.0E-9 T 18-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CH53_588 5f4b6c503fc059a384363338d354da0c 399 Pfam PF03692 Putative zinc- or iron-chelating domain 19 125 1.4E-6 T 18-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CH53_588 5f4b6c503fc059a384363338d354da0c 399 ProDom PD035357 TRANSFERASE 2.1.1.- LYSINE METHYLTRANSFERASE N-METHYLTRANSFERASE FLAGELLUM LYSINE-N-METHYLASE BIOSYNTHETIC FLAGELLIN N-METHYLATION 235 398 1.0E-42 T 18-10-2018 IPR020193 Flagellin lysine-N-methylase, C-terminal CH53_3103 d70aaa3a8b3eaef3c0da5820c6b053f6 148 Pfam PF01475 Ferric uptake regulator family 11 130 4.6E-47 T 18-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CH53_3103 d70aaa3a8b3eaef3c0da5820c6b053f6 148 Gene3D G3DSA:3.30.1490.190 85 143 1.9E-24 T 18-10-2018 CH53_3103 d70aaa3a8b3eaef3c0da5820c6b053f6 148 Gene3D G3DSA:1.10.10.10 1 83 1.3E-33 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3103 d70aaa3a8b3eaef3c0da5820c6b053f6 148 SUPERFAMILY SSF46785 5 134 1.36E-44 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2421 29d9f28ecedad43a145ff885add61ca9 265 Gene3D G3DSA:3.40.50.11240 60 238 5.0E-65 T 18-10-2018 CH53_2421 29d9f28ecedad43a145ff885add61ca9 265 PIRSF PIRSF018982 2 250 6.5E-92 T 18-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CH53_2421 29d9f28ecedad43a145ff885add61ca9 265 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 5 239 3.7E-91 T 18-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CH53_2421 29d9f28ecedad43a145ff885add61ca9 265 Gene3D G3DSA:1.10.30.40 3 49 1.9E-8 T 18-10-2018 CH53_2525 b3256cd5a11ca4856af5a3e7efedb9bb 337 Pfam PF16946 OMPG-porin 1 family 43 337 5.4E-129 T 18-10-2018 IPR031605 Putative OMPG-porin 1 family CH53_2380 853adca50db8a7bf59bfbb9a9c41ff8a 293 Pfam PF00482 Type II secretion system (T2SS), protein F 129 250 4.1E-17 T 18-10-2018 IPR018076 Type II secretion system F domain CH53_3747 ac781f2c5a14468933e4fa7c3301955c 356 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 192 2.2E-27 T 18-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CH53_665 2b66a05a96ab8e41d51fe90a62688959 394 Pfam PF13942 YfhG lipoprotein 68 241 5.0E-77 T 18-10-2018 IPR025262 Quorum-sensing regulator protein G CH53_665 2b66a05a96ab8e41d51fe90a62688959 394 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 34 243 2.0E-101 T 18-10-2018 CH53_3020 7763d6c0b5854e12352706b5439fcd37 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 247 1.8E-59 T 18-10-2018 CH53_3020 7763d6c0b5854e12352706b5439fcd37 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CH53_3020 7763d6c0b5854e12352706b5439fcd37 248 SUPERFAMILY SSF51735 5 248 2.58E-75 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3020 7763d6c0b5854e12352706b5439fcd37 248 Gene3D G3DSA:3.40.50.720 1 248 1.2E-76 T 18-10-2018 CH53_3020 7763d6c0b5854e12352706b5439fcd37 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.0E-34 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3020 7763d6c0b5854e12352706b5439fcd37 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.0E-34 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3020 7763d6c0b5854e12352706b5439fcd37 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.0E-34 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3020 7763d6c0b5854e12352706b5439fcd37 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.0E-34 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3020 7763d6c0b5854e12352706b5439fcd37 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.0E-34 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_2355 ee0ceacaeaa03f1b1791102c2b57b677 285 SUPERFAMILY SSF51430 12 284 5.76E-63 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CH53_2355 ee0ceacaeaa03f1b1791102c2b57b677 285 PRINTS PR00069 Aldo-keto reductase signature 47 71 2.0E-8 T 18-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CH53_2355 ee0ceacaeaa03f1b1791102c2b57b677 285 PRINTS PR00069 Aldo-keto reductase signature 148 165 2.0E-8 T 18-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CH53_2355 ee0ceacaeaa03f1b1791102c2b57b677 285 PRINTS PR00069 Aldo-keto reductase signature 218 242 2.0E-8 T 18-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CH53_2355 ee0ceacaeaa03f1b1791102c2b57b677 285 Gene3D G3DSA:3.20.20.100 7 285 6.1E-63 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CH53_2355 ee0ceacaeaa03f1b1791102c2b57b677 285 Pfam PF00248 Aldo/keto reductase family 17 284 7.4E-47 T 18-10-2018 IPR023210 NADP-dependent oxidoreductase domain CH53_3597 ba0f998ceeab265c670c65c92cb7d36b 123 Gene3D G3DSA:1.10.10.10 38 119 2.7E-6 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3597 ba0f998ceeab265c670c65c92cb7d36b 123 SUPERFAMILY SSF46785 47 100 5.46E-7 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2447 f02742150e7a36f8154d17f0c3ffa5f9 290 SUPERFAMILY SSF46894 22 102 1.98E-14 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_2447 f02742150e7a36f8154d17f0c3ffa5f9 290 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 102 1.3E-12 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_2447 f02742150e7a36f8154d17f0c3ffa5f9 290 Gene3D G3DSA:1.10.10.10 8 108 2.6E-16 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2447 f02742150e7a36f8154d17f0c3ffa5f9 290 SMART SM00862 25 102 9.4E-13 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_114 634d69beeb790773ba4061f95bcf2d43 168 PIRSF PIRSF003093 1 168 3.0E-83 T 18-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CH53_114 634d69beeb790773ba4061f95bcf2d43 168 Gene3D G3DSA:3.40.50.300 32 145 3.4E-27 T 18-10-2018 CH53_114 634d69beeb790773ba4061f95bcf2d43 168 Pfam PF03846 Cell division inhibitor SulA 9 120 2.4E-54 T 18-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CH53_114 634d69beeb790773ba4061f95bcf2d43 168 SUPERFAMILY SSF52540 32 146 2.39E-34 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_114 634d69beeb790773ba4061f95bcf2d43 168 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 168 40.235 T 18-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CH53_3266 d31b5c3db427352a2e45012f5844824a 383 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 13 370 7.2E-89 T 18-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB CH53_3266 d31b5c3db427352a2e45012f5844824a 383 Gene3D G3DSA:1.20.1250.20 1 379 2.6E-14 T 18-10-2018 CH53_3266 d31b5c3db427352a2e45012f5844824a 383 SUPERFAMILY SSF103473 6 376 4.58E-22 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_3134 b9f03df87fbd9fbfe5996f7bd8a0d520 243 Pfam PF06149 Protein of unknown function (DUF969) 7 224 5.0E-88 T 18-10-2018 IPR010374 Protein of unknown function DUF969 CH53_1867 9b250ea737678b7b6286cf608896b27e 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 49.469 T 18-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CH53_1867 9b250ea737678b7b6286cf608896b27e 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 8.0E-47 T 18-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CH53_1867 9b250ea737678b7b6286cf608896b27e 310 SUPERFAMILY SSF51735 1 306 1.62E-64 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_1867 9b250ea737678b7b6286cf608896b27e 310 Gene3D G3DSA:3.90.25.10 168 290 1.9E-121 T 18-10-2018 CH53_1867 9b250ea737678b7b6286cf608896b27e 310 Gene3D G3DSA:3.40.50.720 3 302 1.9E-121 T 18-10-2018 CH53_1867 9b250ea737678b7b6286cf608896b27e 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 1.0E-136 T 18-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CH53_3766 69980a78a3cf14851f1c37494ac758e1 133 PIRSF PIRSF005610 1 125 8.2E-28 T 18-10-2018 IPR007360 Invasion gene expression up-regulator, SirB CH53_3766 69980a78a3cf14851f1c37494ac758e1 133 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 126 1.1E-44 T 18-10-2018 IPR007360 Invasion gene expression up-regulator, SirB CH53_297 a01fb396c4440809c228d7d5ccb48a05 240 Gene3D G3DSA:1.10.260.40 1 91 3.9E-36 T 18-10-2018 CH53_297 a01fb396c4440809c228d7d5ccb48a05 240 SUPERFAMILY SSF51306 109 233 8.55E-27 T 18-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CH53_297 a01fb396c4440809c228d7d5ccb48a05 240 Pfam PF01381 Helix-turn-helix 25 73 1.0E-8 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_297 a01fb396c4440809c228d7d5ccb48a05 240 SMART SM00530 16 75 1.7E-7 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CH53_297 a01fb396c4440809c228d7d5ccb48a05 240 Gene3D G3DSA:2.10.109.10 106 239 2.5E-50 T 18-10-2018 CH53_297 a01fb396c4440809c228d7d5ccb48a05 240 SUPERFAMILY SSF47413 1 93 1.47E-21 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_297 a01fb396c4440809c228d7d5ccb48a05 240 Pfam PF00717 Peptidase S24-like 152 223 3.6E-14 T 18-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CH53_1590 4c0bc69fa7042e9a7b6a43bf9e835928 231 Gene3D G3DSA:2.60.120.10 7 229 3.1E-99 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_1590 4c0bc69fa7042e9a7b6a43bf9e835928 231 PIRSF PIRSF006232 1 230 7.2E-56 T 18-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CH53_1590 4c0bc69fa7042e9a7b6a43bf9e835928 231 Gene3D G3DSA:2.60.120.10 11 135 3.1E-99 T 18-10-2018 IPR014710 RmlC-like jelly roll fold CH53_1590 4c0bc69fa7042e9a7b6a43bf9e835928 231 Pfam PF02678 Pirin 7 119 1.4E-37 T 18-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CH53_1590 4c0bc69fa7042e9a7b6a43bf9e835928 231 SUPERFAMILY SSF51182 1 231 5.84E-79 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_1178 3a0b1f0282d9b252ece29cfc026a8d31 180 Gene3D G3DSA:1.10.357.10 1 177 3.3E-21 T 18-10-2018 CH53_1178 3a0b1f0282d9b252ece29cfc026a8d31 180 SUPERFAMILY SSF46689 2 62 2.72E-12 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1178 3a0b1f0282d9b252ece29cfc026a8d31 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 46 4.9E-11 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_4073 15bae40ef75825eddd98d324c0013607 508 Pfam PF00854 POT family 96 452 9.7E-88 T 18-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 CH53_4073 15bae40ef75825eddd98d324c0013607 508 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 6 496 52.852 T 18-10-2018 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0016020|GO:1904680 CH53_4073 15bae40ef75825eddd98d324c0013607 508 SUPERFAMILY SSF103473 25 494 1.4E-30 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_4073 15bae40ef75825eddd98d324c0013607 508 Gene3D G3DSA:1.20.1250.20 18 493 9.0E-114 T 18-10-2018 CH53_4073 15bae40ef75825eddd98d324c0013607 508 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 159 171 - T 18-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CH53_4073 15bae40ef75825eddd98d324c0013607 508 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 24 492 1.9E-140 T 18-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 CH53_874 cdbd6f523f62540bb422e9c1abb5ceaf 610 Pfam PF02705 K+ potassium transporter 5 531 7.5E-203 T 18-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CH53_874 cdbd6f523f62540bb422e9c1abb5ceaf 610 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 1 610 30.426 T 18-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup CH53_2150 0672b8b6f1cb6091a774c0af0ceb5bae 122 Gene3D G3DSA:1.10.3830.10 2 122 7.4E-42 T 18-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CH53_2150 0672b8b6f1cb6091a774c0af0ceb5bae 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 5.2E-35 T 18-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CH53_2150 0672b8b6f1cb6091a774c0af0ceb5bae 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 18-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CH53_2559 2a426918ac69c17af06cd350e3d6f058 159 Pfam PF04965 Gene 25-like lysozyme 36 136 2.2E-15 T 18-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD CH53_2559 2a426918ac69c17af06cd350e3d6f058 159 SUPERFAMILY SSF160719 72 144 1.23E-11 T 18-10-2018 CH53_3673 da4116e3291324d13f2008841f342f21 189 Pfam PF00419 Fimbrial protein 28 188 1.4E-10 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_3673 da4116e3291324d13f2008841f342f21 189 SUPERFAMILY SSF49401 27 189 6.46E-30 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_3673 da4116e3291324d13f2008841f342f21 189 Gene3D G3DSA:2.60.40.1090 27 188 7.8E-30 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_2255 6e75c2a5b636d4979a79a0e3d0ace328 208 Gene3D G3DSA:3.10.450.710 21 200 2.7E-41 T 18-10-2018 CH53_2255 6e75c2a5b636d4979a79a0e3d0ace328 208 PIRSF PIRSF004649 1 208 2.1E-58 T 18-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CH53_2255 6e75c2a5b636d4979a79a0e3d0ace328 208 Pfam PF05494 MlaC protein 31 195 5.0E-52 T 18-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CH53_566 41c04be208df1d9368cb7d2dfac0dba1 216 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 16 172 2.6E-38 T 18-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 CH53_566 41c04be208df1d9368cb7d2dfac0dba1 216 Gene3D G3DSA:3.30.1380.10 2 194 7.1E-35 T 18-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CH53_566 41c04be208df1d9368cb7d2dfac0dba1 216 SUPERFAMILY SSF55166 14 178 1.26E-19 T 18-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CH53_2969 e70cefc050ec90ed6b7afd4a636d1535 246 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 3.1E-5 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_2969 e70cefc050ec90ed6b7afd4a636d1535 246 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 3.1E-5 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_2969 e70cefc050ec90ed6b7afd4a636d1535 246 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 3.1E-5 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_2969 e70cefc050ec90ed6b7afd4a636d1535 246 Pfam PF12840 Helix-turn-helix domain 14 72 7.7E-14 T 18-10-2018 CH53_2969 e70cefc050ec90ed6b7afd4a636d1535 246 SUPERFAMILY SSF46785 4 91 2.83E-18 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_2969 e70cefc050ec90ed6b7afd4a636d1535 246 Gene3D G3DSA:1.10.10.10 5 95 1.1E-16 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2969 e70cefc050ec90ed6b7afd4a636d1535 246 SMART SM00418 13 92 6.2E-15 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CH53_2166 8147230e551309ec914fc6fa845eaa56 455 Pfam PF00860 Permease family 32 415 3.9E-82 T 18-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CH53_1421 77367faac77828057e1ae78406c04e73 71 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 1 71 5.8E-24 T 18-10-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 CH53_1421 77367faac77828057e1ae78406c04e73 71 SUPERFAMILY SSF140129 1 67 1.2E-19 T 18-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 CH53_1421 77367faac77828057e1ae78406c04e73 71 Gene3D G3DSA:1.20.58.90 1 71 1.9E-9 T 18-10-2018 CH53_1421 77367faac77828057e1ae78406c04e73 71 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 3 71 1.4E-24 T 18-10-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 CH53_2221 4cb3772f225d67315dd21c590a74c6e7 98 TIGRFAM TIGR03578 EF_0831: conserved hypothetical protein EF_0831/AHA_3912 2 96 9.9E-40 T 18-10-2018 IPR020037 Protein of unknown function DUF4312 CH53_2221 4cb3772f225d67315dd21c590a74c6e7 98 Pfam PF14189 Domain of unknown function (DUF4312) 6 88 8.2E-38 T 18-10-2018 IPR020037 Protein of unknown function DUF4312 CH53_3295 a38796d45a095327b94e4977e759161f 135 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 23.987 T 18-10-2018 IPR022957 Uncharacterised protein family UPF0299 CH53_3295 a38796d45a095327b94e4977e759161f 135 Pfam PF03788 LrgA family 23 113 2.0E-30 T 18-10-2018 IPR005538 LrgA/CidA family GO:0016021 CH53_1947 f2b2efb6d6f05e1754959007a767132b 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 302 7.2E-42 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_3705 b4e260d7bf39bdd69191ce18ecb18aad 175 PIRSF PIRSF017018 1 175 3.2E-73 T 18-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type CH53_3705 b4e260d7bf39bdd69191ce18ecb18aad 175 Pfam PF10634 Fe2+ transport protein 25 173 1.7E-70 T 18-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type CH53_3705 b4e260d7bf39bdd69191ce18ecb18aad 175 Gene3D G3DSA:2.60.40.2480 23 175 2.7E-77 T 18-10-2018 IPR038482 Periplasmic metal-binding protein tp34-type superfamily CH53_3859 5e96e176570a5dbae50b0960428bb368 286 Gene3D G3DSA:1.10.10.10 3 91 4.9E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3859 5e96e176570a5dbae50b0960428bb368 286 SUPERFAMILY SSF46785 5 79 2.79E-14 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_3859 5e96e176570a5dbae50b0960428bb368 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 8.6E-15 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CH53_858 9cad8c23fe11f6acc081f365fabde777 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 18 274 2.3E-43 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_1982 5c361553ba27291fee27bf8ab1609e8c 458 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 442 1.9E-262 T 18-10-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 CH53_1982 5c361553ba27291fee27bf8ab1609e8c 458 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 447 38.314 T 18-10-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 CH53_1450 5a8ffd88a6f44cc89910befb5b674aea 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 41.249 T 18-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 CH53_1450 5a8ffd88a6f44cc89910befb5b674aea 190 Pfam PF01300 Telomere recombination 16 183 2.8E-43 T 18-10-2018 IPR006070 YrdC-like domain GO:0003725 CH53_1450 5a8ffd88a6f44cc89910befb5b674aea 190 SUPERFAMILY SSF55821 7 186 3.05E-54 T 18-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CH53_1450 5a8ffd88a6f44cc89910befb5b674aea 190 Gene3D G3DSA:3.90.870.10 1 188 1.7E-62 T 18-10-2018 CH53_1139 21625f9db81ac53e8e4592d480e01545 344 Gene3D G3DSA:3.40.50.2300 69 156 3.0E-18 T 18-10-2018 CH53_1139 21625f9db81ac53e8e4592d480e01545 344 Pfam PF13377 Periplasmic binding protein-like domain 185 333 3.0E-12 T 18-10-2018 CH53_1139 21625f9db81ac53e8e4592d480e01545 344 SUPERFAMILY SSF53822 66 325 5.3E-47 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_1139 21625f9db81ac53e8e4592d480e01545 344 SMART SM00354 6 79 1.9E-31 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_1139 21625f9db81ac53e8e4592d480e01545 344 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 8 333 1.5E-123 T 18-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 CH53_1139 21625f9db81ac53e8e4592d480e01545 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 56 6.8E-18 T 18-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CH53_1139 21625f9db81ac53e8e4592d480e01545 344 Gene3D G3DSA:3.40.50.2300 161 335 1.3E-31 T 18-10-2018 CH53_1139 21625f9db81ac53e8e4592d480e01545 344 SUPERFAMILY SSF47413 7 64 1.5E-16 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_1139 21625f9db81ac53e8e4592d480e01545 344 Gene3D G3DSA:1.10.260.40 7 68 2.0E-24 T 18-10-2018 CH53_18 fcf1fb31ababe7d4d8c22be8ed1541e3 84 Pfam PF13991 BssS protein family 11 81 1.7E-38 T 18-10-2018 IPR025730 Biofilm regulator BssS CH53_18 fcf1fb31ababe7d4d8c22be8ed1541e3 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 1.0E-40 T 18-10-2018 IPR025730 Biofilm regulator BssS CH53_833 a0b21fbdb2571f87f96f5a6098dbe1cd 205 PIRSF PIRSF033535 1 204 2.3E-73 T 18-10-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein CH53_833 a0b21fbdb2571f87f96f5a6098dbe1cd 205 SUPERFAMILY SSF141318 49 202 7.85E-44 T 18-10-2018 IPR036215 TM0957-like superfamily CH53_833 a0b21fbdb2571f87f96f5a6098dbe1cd 205 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 13 199 2.4E-35 T 18-10-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein CH53_299 5c377e5bf6af36d2e4ea6b449f77bcc6 313 Pfam PF01278 Omptin family 33 313 6.7E-111 T 18-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CH53_299 5c377e5bf6af36d2e4ea6b449f77bcc6 313 SUPERFAMILY SSF69917 32 313 1.18E-100 T 18-10-2018 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 CH53_299 5c377e5bf6af36d2e4ea6b449f77bcc6 313 PIRSF PIRSF001522 1 313 2.5E-115 T 18-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CH53_299 5c377e5bf6af36d2e4ea6b449f77bcc6 313 PRINTS PR00482 Omptin serine protease signature 59 84 3.1E-74 T 18-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CH53_299 5c377e5bf6af36d2e4ea6b449f77bcc6 313 PRINTS PR00482 Omptin serine protease signature 39 53 3.1E-74 T 18-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CH53_299 5c377e5bf6af36d2e4ea6b449f77bcc6 313 PRINTS PR00482 Omptin serine protease signature 85 110 3.1E-74 T 18-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CH53_299 5c377e5bf6af36d2e4ea6b449f77bcc6 313 PRINTS PR00482 Omptin serine protease signature 117 144 3.1E-74 T 18-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CH53_299 5c377e5bf6af36d2e4ea6b449f77bcc6 313 PRINTS PR00482 Omptin serine protease signature 236 256 3.1E-74 T 18-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CH53_299 5c377e5bf6af36d2e4ea6b449f77bcc6 313 PRINTS PR00482 Omptin serine protease signature 188 209 3.1E-74 T 18-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CH53_299 5c377e5bf6af36d2e4ea6b449f77bcc6 313 PRINTS PR00482 Omptin serine protease signature 210 231 3.1E-74 T 18-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CH53_299 5c377e5bf6af36d2e4ea6b449f77bcc6 313 PRINTS PR00482 Omptin serine protease signature 257 277 3.1E-74 T 18-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CH53_299 5c377e5bf6af36d2e4ea6b449f77bcc6 313 PRINTS PR00482 Omptin serine protease signature 145 172 3.1E-74 T 18-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CH53_299 5c377e5bf6af36d2e4ea6b449f77bcc6 313 Gene3D G3DSA:2.40.128.90 26 313 1.1E-99 T 18-10-2018 CH53_4003 3a24bf74ae44c308bafc38f6143baf12 996 Pfam PF07520 Virulence factor SrfB 1 993 0.0 T 18-10-2018 IPR009216 Virulence factor SrfB CH53_4003 3a24bf74ae44c308bafc38f6143baf12 996 PIRSF PIRSF034585 1 996 0.0 T 18-10-2018 IPR009216 Virulence factor SrfB CH53_2480 40723a5ef33f06a9819f9b96a99c9daa 479 Pfam PF00501 AMP-binding enzyme 9 368 5.5E-54 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CH53_2480 40723a5ef33f06a9819f9b96a99c9daa 479 ProSitePatterns PS00455 Putative AMP-binding domain signature. 135 146 - T 18-10-2018 IPR020845 AMP-binding, conserved site CH53_2480 40723a5ef33f06a9819f9b96a99c9daa 479 SUPERFAMILY SSF56801 3 467 4.71E-84 T 18-10-2018 CH53_2480 40723a5ef33f06a9819f9b96a99c9daa 479 Gene3D G3DSA:3.40.50.12780 3 364 4.8E-68 T 18-10-2018 CH53_3795 9e4d6d42ca8374a3058a5c86dcde42cd 191 SUPERFAMILY SSF52499 3 189 5.1E-48 T 18-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CH53_3795 9e4d6d42ca8374a3058a5c86dcde42cd 191 Pfam PF00857 Isochorismatase family 8 182 1.9E-37 T 18-10-2018 IPR000868 Isochorismatase-like GO:0003824 CH53_3795 9e4d6d42ca8374a3058a5c86dcde42cd 191 Gene3D G3DSA:3.40.50.850 1 189 3.4E-51 T 18-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CH53_2304 e15326c5cdbeb5270810831591824fd7 327 Pfam PF03741 Integral membrane protein TerC family 80 282 1.5E-56 T 18-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 CH53_2304 e15326c5cdbeb5270810831591824fd7 327 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 7 312 7.0E-122 T 18-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 CH53_2583 1f54aefef4bae74b960daf0b938f997b 197 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 50.245 T 18-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 CH53_2583 1f54aefef4bae74b960daf0b938f997b 197 Gene3D G3DSA:3.90.950.10 1 197 1.1E-82 T 18-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CH53_2583 1f54aefef4bae74b960daf0b938f997b 197 SUPERFAMILY SSF52972 1 196 1.31E-73 T 18-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CH53_2583 1f54aefef4bae74b960daf0b938f997b 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 2.4E-66 T 18-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 CH53_2583 1f54aefef4bae74b960daf0b938f997b 197 Pfam PF01725 Ham1 family 4 192 7.2E-57 T 18-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 CH53_2655 1af976e62c2628f673513ecffa4b2149 173 Pfam PF11356 Type II secretion system protein C 66 170 1.1E-14 T 18-10-2018 IPR024961 Type II secretion system protein C, N-terminal CH53_2655 1af976e62c2628f673513ecffa4b2149 173 Gene3D G3DSA:2.30.30.830 108 172 2.1E-12 T 18-10-2018 CH53_3247 a5c3e549ce9bb1531d07732ae8dd11cf 295 SUPERFAMILY SSF103481 187 281 4.05E-10 T 18-10-2018 CH53_3247 a5c3e549ce9bb1531d07732ae8dd11cf 295 Pfam PF00892 EamA-like transporter family 150 278 2.7E-16 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_2030 78829d61a9b88355bc2af8aa31bd3d89 317 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 19 316 1.8E-130 T 18-10-2018 IPR004513 Cell division protein FtsX GO:0016021 CH53_2030 78829d61a9b88355bc2af8aa31bd3d89 317 PIRSF PIRSF003097 16 313 7.4E-95 T 18-10-2018 IPR004513 Cell division protein FtsX GO:0016021 CH53_2030 78829d61a9b88355bc2af8aa31bd3d89 317 Pfam PF02687 FtsX-like permease family 218 307 3.4E-6 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CH53_835 5e569d48e79f18a22a6c6b39490b2e08 112 Pfam PF13744 Helix-turn-helix domain 19 112 6.1E-16 T 18-10-2018 IPR039554 HigA2-like, helix-turn-helix domain CH53_835 5e569d48e79f18a22a6c6b39490b2e08 112 SUPERFAMILY SSF47413 45 112 1.59E-12 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CH53_835 5e569d48e79f18a22a6c6b39490b2e08 112 Gene3D G3DSA:1.10.260.40 16 112 2.0E-19 T 18-10-2018 CH53_3006 fed9c746df961b4b85d54a0efc3c00a6 447 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 443 4.2E-115 T 18-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 CH53_3006 fed9c746df961b4b85d54a0efc3c00a6 447 SUPERFAMILY SSF56954 22 442 2.35E-70 T 18-10-2018 CH53_3006 fed9c746df961b4b85d54a0efc3c00a6 447 Pfam PF02321 Outer membrane efflux protein 242 426 6.9E-23 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CH53_3006 fed9c746df961b4b85d54a0efc3c00a6 447 Pfam PF02321 Outer membrane efflux protein 24 216 1.9E-19 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CH53_3006 fed9c746df961b4b85d54a0efc3c00a6 447 Gene3D G3DSA:1.20.1600.10 23 446 6.8E-81 T 18-10-2018 CH53_918 1a260716ff084fe1bcdc0006cac1d948 244 Pfam PF01026 TatD related DNase 3 239 1.1E-35 T 18-10-2018 IPR001130 TatD family GO:0016788 CH53_918 1a260716ff084fe1bcdc0006cac1d948 244 Gene3D G3DSA:3.20.20.140 2 242 5.3E-64 T 18-10-2018 CH53_918 1a260716ff084fe1bcdc0006cac1d948 244 SUPERFAMILY SSF51556 3 241 2.9E-44 T 18-10-2018 IPR032466 Metal-dependent hydrolase CH53_918 1a260716ff084fe1bcdc0006cac1d948 244 PIRSF PIRSF005902 2 243 1.1E-37 T 18-10-2018 IPR001130 TatD family GO:0016788 CH53_4269 3cd2924614ad125406e808c87b03d9f9 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 1.5E-25 T 18-10-2018 CH53_4269 3cd2924614ad125406e808c87b03d9f9 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.5E-25 T 18-10-2018 CH53_4269 3cd2924614ad125406e808c87b03d9f9 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.5E-25 T 18-10-2018 CH53_4269 3cd2924614ad125406e808c87b03d9f9 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 1.5E-25 T 18-10-2018 CH53_4269 3cd2924614ad125406e808c87b03d9f9 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 1.5E-25 T 18-10-2018 CH53_4269 3cd2924614ad125406e808c87b03d9f9 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.5E-25 T 18-10-2018 CH53_4269 3cd2924614ad125406e808c87b03d9f9 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 442 1.6E-104 T 18-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CH53_4269 3cd2924614ad125406e808c87b03d9f9 463 SUPERFAMILY SSF118215 29 442 6.15E-99 T 18-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CH53_4269 3cd2924614ad125406e808c87b03d9f9 463 Gene3D G3DSA:1.10.3860.10 19 459 4.1E-110 T 18-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CH53_660 655fef52d8e40f440c78be2f81a60a5e 117 Pfam PF10941 Protein of unknown function DUF2620 2 116 7.4E-48 T 18-10-2018 IPR021238 Protein of unknown function DUF2620 CH53_1723 83ec2b2c543c7bc38424b5b3a0024034 441 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 15 437 9.0E-101 T 18-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CH53_1723 83ec2b2c543c7bc38424b5b3a0024034 441 Pfam PF02378 Phosphotransferase system, EIIC 32 365 4.2E-45 T 18-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CH53_1723 83ec2b2c543c7bc38424b5b3a0024034 441 PIRSF PIRSF006351 4 441 1.4E-130 T 18-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CH53_1064 326a20f8c007fe3e46a6d0071ef57b38 204 Pfam PF01810 LysE type translocator 15 203 6.5E-38 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CH53_1064 326a20f8c007fe3e46a6d0071ef57b38 204 PIRSF PIRSF006324 1 204 2.9E-57 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CH53_2857 7ba5f16dc5ca5edeaed9c33e7acac026 492 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 4.3E-118 T 18-10-2018 CH53_2857 7ba5f16dc5ca5edeaed9c33e7acac026 492 Gene3D G3DSA:1.20.1250.20 4 197 3.6E-17 T 18-10-2018 CH53_2857 7ba5f16dc5ca5edeaed9c33e7acac026 492 Gene3D G3DSA:1.20.1250.20 213 418 2.1E-14 T 18-10-2018 CH53_2857 7ba5f16dc5ca5edeaed9c33e7acac026 492 SUPERFAMILY SSF103473 6 405 2.62E-44 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_2857 7ba5f16dc5ca5edeaed9c33e7acac026 492 Pfam PF07690 Major Facilitator Superfamily 17 366 2.9E-31 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_1566 0bf2675c123c244aaa686bb0ab2cbc11 227 Gene3D G3DSA:3.40.50.2020 111 226 3.7E-15 T 18-10-2018 CH53_1566 0bf2675c123c244aaa686bb0ab2cbc11 227 SUPERFAMILY SSF53271 43 225 2.75E-37 T 18-10-2018 IPR029057 Phosphoribosyltransferase-like CH53_1566 0bf2675c123c244aaa686bb0ab2cbc11 227 Pfam PF00156 Phosphoribosyl transferase domain 137 224 8.5E-7 T 18-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CH53_3351 ba4f3e2bc3e80da9cbaab3c2575dbbdf 150 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 2 142 5.7E-51 T 18-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CH53_3351 ba4f3e2bc3e80da9cbaab3c2575dbbdf 150 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 142 3.7E-55 T 18-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CH53_3351 ba4f3e2bc3e80da9cbaab3c2575dbbdf 150 PIRSF PIRSF036409 1 147 1.4E-51 T 18-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CH53_3351 ba4f3e2bc3e80da9cbaab3c2575dbbdf 150 Gene3D G3DSA:3.40.50.300 1 147 6.9E-14 T 18-10-2018 CH53_3351 ba4f3e2bc3e80da9cbaab3c2575dbbdf 150 SUPERFAMILY SSF52540 3 141 4.18E-16 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_1255 19f4f370c05307596c382732496e9c72 193 Gene3D G3DSA:3.40.50.11310 1 193 1.2E-63 T 18-10-2018 IPR038058 PhnH-like superfamily CH53_1255 19f4f370c05307596c382732496e9c72 193 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 189 8.2E-53 T 18-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 CH53_1255 19f4f370c05307596c382732496e9c72 193 SUPERFAMILY SSF159709 13 192 1.57E-56 T 18-10-2018 IPR038058 PhnH-like superfamily CH53_1255 19f4f370c05307596c382732496e9c72 193 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 191 2.5E-64 T 18-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 CH53_1255 19f4f370c05307596c382732496e9c72 193 PIRSF PIRSF020680 1 193 6.5E-57 T 18-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 CH53_1156 40be77301adc7e4f9bd495c07d5b0714 410 Pfam PF04932 O-Antigen ligase 195 342 1.2E-16 T 18-10-2018 IPR007016 O-antigen ligase-related CH53_4021 937ee3344b5b72309258d934f679c524 262 PIRSF PIRSF029730 7 261 2.8E-84 T 18-10-2018 IPR011227 Uncharacterised conserved protein UCP029730 CH53_4021 937ee3344b5b72309258d934f679c524 262 SUPERFAMILY SSF53187 11 258 9.1E-71 T 18-10-2018 CH53_4021 937ee3344b5b72309258d934f679c524 262 Pfam PF05013 N-formylglutamate amidohydrolase 27 234 1.1E-40 T 18-10-2018 IPR007709 N-formylglutamate amidohydrolase CH53_4021 937ee3344b5b72309258d934f679c524 262 Gene3D G3DSA:3.40.630.40 17 260 3.2E-76 T 18-10-2018 CH53_1732 9240acf8a3d6a0bb107ba66b40cbdf89 46 Pfam PF00468 Ribosomal protein L34 1 44 3.9E-23 T 18-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1732 9240acf8a3d6a0bb107ba66b40cbdf89 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 30 1.0E-10 T 18-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1732 9240acf8a3d6a0bb107ba66b40cbdf89 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.9E-26 T 18-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1732 9240acf8a3d6a0bb107ba66b40cbdf89 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.553 T 18-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CH53_1732 9240acf8a3d6a0bb107ba66b40cbdf89 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 18-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CH53_2654 648b5b9a3dc18b67907670380a269946 138 Gene3D G3DSA:1.10.10.10 23 124 5.3E-8 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2654 648b5b9a3dc18b67907670380a269946 138 SUPERFAMILY SSF46894 43 118 1.11E-6 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_65 7dfeb9a50c2bdcf67e2c5746905b144b 433 Pfam PF00860 Permease family 12 394 3.6E-64 T 18-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CH53_3879 ca634deda08ffe74b3c27fed01afc25e 333 SMART SM00382 48 241 3.9E-18 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_3879 ca634deda08ffe74b3c27fed01afc25e 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 310 1.0E-18 T 18-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CH53_3879 ca634deda08ffe74b3c27fed01afc25e 333 Pfam PF00005 ABC transporter 40 191 3.2E-31 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_3879 ca634deda08ffe74b3c27fed01afc25e 333 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3879 ca634deda08ffe74b3c27fed01afc25e 333 Gene3D G3DSA:3.40.50.300 8 332 4.8E-98 T 18-10-2018 CH53_3879 ca634deda08ffe74b3c27fed01afc25e 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 2.5E-29 T 18-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CH53_3879 ca634deda08ffe74b3c27fed01afc25e 333 SUPERFAMILY SSF52540 24 263 4.24E-74 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3666 40c39dcd18c903e17c70cdde769dff5f 267 Gene3D G3DSA:2.60.40.1090 145 267 2.9E-5 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_4248 0357093f5cb5344b16ba0b03e35e5126 296 SMART SM00382 36 222 3.3E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_4248 0357093f5cb5344b16ba0b03e35e5126 296 Pfam PF00005 ABC transporter 29 174 1.4E-28 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_4248 0357093f5cb5344b16ba0b03e35e5126 296 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_4248 0357093f5cb5344b16ba0b03e35e5126 296 Gene3D G3DSA:3.40.50.300 9 249 1.3E-59 T 18-10-2018 CH53_4248 0357093f5cb5344b16ba0b03e35e5126 296 SUPERFAMILY SSF52540 6 238 9.75E-55 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3097 95fd7669d2f90f37f121af95f54bd574 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 230 5.5E-21 T 18-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CH53_3097 95fd7669d2f90f37f121af95f54bd574 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 9.7E-137 T 18-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 CH53_3097 95fd7669d2f90f37f121af95f54bd574 266 Gene3D G3DSA:3.40.50.1360 1 266 3.4E-116 T 18-10-2018 CH53_3097 95fd7669d2f90f37f121af95f54bd574 266 SUPERFAMILY SSF100950 1 263 2.72E-104 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_3097 95fd7669d2f90f37f121af95f54bd574 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 18-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 CH53_3097 95fd7669d2f90f37f121af95f54bd574 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.337 T 18-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 CH53_2444 33a9bf737c7fcb7b38c536ab4f13109f 633 Pfam PF04632 Fusaric acid resistance protein family 254 525 1.7E-29 T 18-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 CH53_3298 940e46f7f92f8b9f5aeb9c9b183d1378 358 Pfam PF13407 Periplasmic binding protein domain 55 302 3.3E-26 T 18-10-2018 IPR025997 Periplasmic binding protein CH53_3298 940e46f7f92f8b9f5aeb9c9b183d1378 358 Gene3D G3DSA:3.40.50.2300 144 312 2.4E-68 T 18-10-2018 CH53_3298 940e46f7f92f8b9f5aeb9c9b183d1378 358 Gene3D G3DSA:3.40.50.2300 43 309 2.4E-68 T 18-10-2018 CH53_3298 940e46f7f92f8b9f5aeb9c9b183d1378 358 SUPERFAMILY SSF53822 40 305 5.62E-40 T 18-10-2018 IPR028082 Periplasmic binding protein-like I CH53_359 50612fbdfe80b3a60485c7efe734a095 102 Pfam PF05957 Bacterial protein of unknown function (DUF883) 10 102 4.4E-30 T 18-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 CH53_260 a86ba568f49c517c94599fbfbe2a8db1 366 Gene3D G3DSA:1.10.3720.10 123 355 5.3E-18 T 18-10-2018 IPR035906 MetI-like superfamily CH53_260 a86ba568f49c517c94599fbfbe2a8db1 366 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 153 360 1.3E-38 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_260 a86ba568f49c517c94599fbfbe2a8db1 366 SUPERFAMILY SSF161098 132 347 7.46E-15 T 18-10-2018 IPR035906 MetI-like superfamily CH53_859 f5386ab0f4d9f64d01c401e215575325 350 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 321 2.4E-32 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_4166 de4e3584f9ccac19e80827d17819f586 306 Gene3D G3DSA:2.60.40.1080 219 306 1.1E-21 T 18-10-2018 CH53_4166 de4e3584f9ccac19e80827d17819f586 306 Pfam PF08813 Phage tail tube protein, TTP 52 216 2.2E-49 T 18-10-2018 IPR014918 Phage tail tube protein 3 CH53_4166 de4e3584f9ccac19e80827d17819f586 306 SMART SM00635 223 301 9.6E-14 T 18-10-2018 IPR003343 Bacterial Ig-like, group 2 CH53_4166 de4e3584f9ccac19e80827d17819f586 306 SUPERFAMILY SSF49373 222 304 1.02E-12 T 18-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CH53_4166 de4e3584f9ccac19e80827d17819f586 306 Pfam PF02368 Bacterial Ig-like domain (group 2) 223 302 3.0E-15 T 18-10-2018 IPR003343 Bacterial Ig-like, group 2 CH53_852 f002ddd88c8d9333638ffe01fedf2e17 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 312 1.2E-36 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_3324 6162397b26f42eeef9a74a423132a766 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 273 6.1E-103 T 18-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 CH53_3324 6162397b26f42eeef9a74a423132a766 297 SUPERFAMILY SSF53448 1 289 4.06E-59 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_3324 6162397b26f42eeef9a74a423132a766 297 Gene3D G3DSA:3.90.550.10 2 297 3.4E-81 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_3324 6162397b26f42eeef9a74a423132a766 297 Pfam PF00483 Nucleotidyl transferase 5 253 1.1E-23 T 18-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CH53_423 9d954a16e1d4f3047386900b0d14c687 345 PIRSF PIRSF020588 1 344 4.0E-149 T 18-10-2018 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 CH53_749 55a4d0d2ff71b8851459cc65fb880ad3 102 Pfam PF05957 Bacterial protein of unknown function (DUF883) 11 102 1.1E-27 T 18-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 CH53_1263 1feac9ca07144f4bedd8916fc221e709 250 Gene3D G3DSA:3.60.15.10 1 249 1.7E-67 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_1263 1feac9ca07144f4bedd8916fc221e709 250 Pfam PF12706 Beta-lactamase superfamily domain 50 220 2.4E-17 T 18-10-2018 IPR001279 Metallo-beta-lactamase CH53_1263 1feac9ca07144f4bedd8916fc221e709 250 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 247 4.9E-126 T 18-10-2018 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CH53_1263 1feac9ca07144f4bedd8916fc221e709 250 SUPERFAMILY SSF56281 1 249 1.78E-37 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CH53_1448 b4e296c22d44005a4e857780dfda547c 180 Gene3D G3DSA:2.160.10.10 1 180 3.6E-55 T 18-10-2018 CH53_1448 b4e296c22d44005a4e857780dfda547c 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 7.1E-8 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_1448 b4e296c22d44005a4e857780dfda547c 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 46 7.3E-6 T 18-10-2018 IPR001451 Hexapeptide repeat CH53_1448 b4e296c22d44005a4e857780dfda547c 180 SUPERFAMILY SSF51161 3 175 6.65E-47 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily CH53_2801 7c245353dbf493e8d8b367dc61d165ee 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 4.0E-216 T 18-10-2018 IPR010520 UPF0255 family CH53_2801 7c245353dbf493e8d8b367dc61d165ee 415 Gene3D G3DSA:3.40.50.1820 16 414 1.6E-106 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2801 7c245353dbf493e8d8b367dc61d165ee 415 SUPERFAMILY SSF53474 46 411 2.48E-53 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_2801 7c245353dbf493e8d8b367dc61d165ee 415 Hamap MF_01063 Esterase FrsA [frsA]. 1 415 60.701 T 18-10-2018 IPR010520 UPF0255 family CH53_139 2d550da31ee875446e3dbedaa10a9501 242 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 240 51.704 T 18-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 CH53_139 2d550da31ee875446e3dbedaa10a9501 242 Pfam PF04288 MukE-like family 10 226 2.8E-126 T 18-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 CH53_139 2d550da31ee875446e3dbedaa10a9501 242 Gene3D G3DSA:1.10.10.2260 88 195 1.8E-53 T 18-10-2018 CH53_139 2d550da31ee875446e3dbedaa10a9501 242 Gene3D G3DSA:1.10.10.2250 1 78 3.1E-39 T 18-10-2018 CH53_2473 83dc01add21629cc82cdfe710356427c 85 Pfam PF01526 Tn3 transposase DDE domain 3 85 1.8E-27 T 18-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CH53_3950 6ce923252c0a1af412f7d5a0a1c9c1b5 341 Gene3D G3DSA:1.20.1530.20 7 327 7.6E-33 T 18-10-2018 IPR038770 Sodium/solute symporter superfamily CH53_3950 6ce923252c0a1af412f7d5a0a1c9c1b5 341 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 319 1.0E-103 T 18-10-2018 IPR016833 Putative sodium bile acid cotransporter CH53_3950 6ce923252c0a1af412f7d5a0a1c9c1b5 341 PIRSF PIRSF026166 1 336 3.3E-136 T 18-10-2018 IPR016833 Putative sodium bile acid cotransporter CH53_3904 43fcb333054c5dffa7e557afb12cefe6 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 1.4E-4 T 18-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 CH53_3904 43fcb333054c5dffa7e557afb12cefe6 196 PIRSF PIRSF015617 1 196 3.6E-68 T 18-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 CH53_3904 43fcb333054c5dffa7e557afb12cefe6 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 1.1E-78 T 18-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 CH53_3904 43fcb333054c5dffa7e557afb12cefe6 196 SUPERFAMILY SSF52540 7 196 2.53E-75 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_3904 43fcb333054c5dffa7e557afb12cefe6 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 6.7E-59 T 18-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 CH53_3904 43fcb333054c5dffa7e557afb12cefe6 196 Gene3D G3DSA:3.40.50.300 6 196 7.7E-72 T 18-10-2018 CH53_1397 082c3cf5f31a083fb32165e3197b9ea5 345 Gene3D G3DSA:3.40.1570.10 82 332 8.2E-133 T 18-10-2018 CH53_1397 082c3cf5f31a083fb32165e3197b9ea5 345 SUPERFAMILY SSF144064 5 339 9.52E-132 T 18-10-2018 CH53_1397 082c3cf5f31a083fb32165e3197b9ea5 345 Pfam PF05171 Haemin-degrading HemS.ChuX domain 207 338 1.2E-39 T 18-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 CH53_1397 082c3cf5f31a083fb32165e3197b9ea5 345 Pfam PF05171 Haemin-degrading HemS.ChuX domain 29 157 4.9E-42 T 18-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 CH53_1397 082c3cf5f31a083fb32165e3197b9ea5 345 Gene3D G3DSA:3.40.1570.10 13 281 8.2E-133 T 18-10-2018 CH53_4289 324aefac05056799ce0f6d1982ed4363 185 Gene3D G3DSA:3.40.630.30 1 158 1.2E-40 T 18-10-2018 CH53_4289 324aefac05056799ce0f6d1982ed4363 185 SUPERFAMILY SSF55729 4 154 1.28E-36 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_4289 324aefac05056799ce0f6d1982ed4363 185 Pfam PF13302 Acetyltransferase (GNAT) domain 11 151 6.4E-29 T 18-10-2018 IPR000182 GNAT domain CH53_366 d423a70ae27b4a8e3c8dfec6f3239e30 176 Pfam PF01202 Shikimate kinase 12 145 1.1E-10 T 18-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CH53_366 d423a70ae27b4a8e3c8dfec6f3239e30 176 SUPERFAMILY SSF52540 2 162 3.26E-26 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_366 d423a70ae27b4a8e3c8dfec6f3239e30 176 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 164 5.5E-64 T 18-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 CH53_366 d423a70ae27b4a8e3c8dfec6f3239e30 176 Gene3D G3DSA:3.40.50.300 2 169 1.8E-63 T 18-10-2018 CH53_4392 f96c512c2fe3a17e36fecaf25184e88e 232 PIRSF PIRSF028451 3 226 2.5E-32 T 18-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 CH53_4392 f96c512c2fe3a17e36fecaf25184e88e 232 Pfam PF09365 Conserved hypothetical protein (DUF2461) 12 217 1.2E-46 T 18-10-2018 IPR012808 Conserved hypothetical protein CHP02453 CH53_4392 f96c512c2fe3a17e36fecaf25184e88e 232 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 8 221 3.3E-34 T 18-10-2018 IPR012808 Conserved hypothetical protein CHP02453 CH53_3069 56d60b55719a9210853fa9ece3610e00 207 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 164 27.27 T 18-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CH53_3069 56d60b55719a9210853fa9ece3610e00 207 Pfam PF04390 Lipopolysaccharide-assembly 45 159 7.2E-15 T 18-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CH53_3069 56d60b55719a9210853fa9ece3610e00 207 Gene3D G3DSA:3.30.160.150 16 169 1.4E-60 T 18-10-2018 CH53_1096 9f1ba3ba5fc7abaf2f637b3462843daa 209 Pfam PF13689 Domain of unknown function (DUF4154) 66 203 4.0E-32 T 18-10-2018 IPR025293 YfiR-like CH53_677 6821c6d22cf425bee87067c9e1b3b100 243 Gene3D G3DSA:3.20.20.70 1 243 4.2E-109 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_677 6821c6d22cf425bee87067c9e1b3b100 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.278 T 18-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CH53_677 6821c6d22cf425bee87067c9e1b3b100 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 2.1E-103 T 18-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CH53_677 6821c6d22cf425bee87067c9e1b3b100 243 SUPERFAMILY SSF63892 4 242 1.29E-101 T 18-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CH53_677 6821c6d22cf425bee87067c9e1b3b100 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 2.7E-104 T 18-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CH53_2938 935d132c0758a30e137aa4ee484c1704 97 Gene3D G3DSA:3.30.160.390 1 67 5.2E-20 T 18-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CH53_2938 935d132c0758a30e137aa4ee484c1704 97 Pfam PF13356 Arm DNA-binding domain 3 53 2.8E-7 T 18-10-2018 IPR025166 Integrase, DNA-binding domain CH53_53 0bbf3cb96a7ab99cf0c335e063c94902 172 Gene3D G3DSA:1.10.10.10 46 148 6.6E-9 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_53 0bbf3cb96a7ab99cf0c335e063c94902 172 SUPERFAMILY SSF46894 61 144 5.1E-8 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_53 0bbf3cb96a7ab99cf0c335e063c94902 172 Pfam PF00486 Transcriptional regulatory protein, C terminal 68 141 6.2E-6 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_2786 785d8a55231e9828c92fcea6082eea22 254 Gene3D G3DSA:3.60.20.10 1 254 1.1E-97 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CH53_2786 785d8a55231e9828c92fcea6082eea22 254 Pfam PF13230 Glutamine amidotransferases class-II 1 252 1.4E-113 T 18-10-2018 IPR026869 Putative glutamine amidotransferase type 2 CH53_2786 785d8a55231e9828c92fcea6082eea22 254 SUPERFAMILY SSF56235 2 252 8.71E-51 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CH53_583 5dbf8091a96516cdf376355b49413849 428 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 404 1.7E-127 T 18-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CH53_583 5dbf8091a96516cdf376355b49413849 428 Pfam PF00860 Permease family 16 382 1.0E-104 T 18-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CH53_583 5dbf8091a96516cdf376355b49413849 428 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 18-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CH53_573 ef0f47d3e344b69a8fe3dfba9c6e48b0 289 Pfam PF04228 Putative neutral zinc metallopeptidase 1 286 1.3E-135 T 18-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CH53_1990 49351106864e725e58c16e89759ed0be 374 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 32 362 5.8E-142 T 18-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX CH53_2364 4a635c0d17b48c0755e18815b30d6682 91 Gene3D G3DSA:3.30.2310.20 1 91 9.4E-31 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CH53_2364 4a635c0d17b48c0755e18815b30d6682 91 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 90 5.2E-15 T 18-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CH53_2364 4a635c0d17b48c0755e18815b30d6682 91 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 88 9.3E-11 T 18-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CH53_2217 e3298da9f69ef708d14f71d8666b0978 128 Pfam PF07361 Cytochrome b562 24 128 1.3E-29 T 18-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 CH53_2217 e3298da9f69ef708d14f71d8666b0978 128 Gene3D G3DSA:1.20.120.10 18 128 5.3E-40 T 18-10-2018 CH53_2217 e3298da9f69ef708d14f71d8666b0978 128 PIRSF PIRSF000029 1 128 9.2E-52 T 18-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 CH53_2217 e3298da9f69ef708d14f71d8666b0978 128 SUPERFAMILY SSF47175 23 128 1.65E-31 T 18-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 CH53_1840 1453264947f99f3ff7a1b056f9991a7f 169 Gene3D G3DSA:1.20.120.330 1 133 7.1E-8 T 18-10-2018 CH53_2202 f0fbddaf237d27edcff6357ac38ed68a 162 Pfam PF04093 rod shape-determining protein MreD 6 154 2.9E-44 T 18-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CH53_2202 f0fbddaf237d27edcff6357ac38ed68a 162 PIRSF PIRSF018472 1 162 3.3E-58 T 18-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type CH53_2202 f0fbddaf237d27edcff6357ac38ed68a 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 8 154 6.5E-44 T 18-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CH53_909 45a35d7cc65649e029ba6e49a84fa8b3 297 Pfam PF16162 Domain of unknown function (DUF4868) 121 283 7.8E-10 T 18-10-2018 IPR032359 Protein of unknown function DUF4868 CH53_1039 09752221fe84884fd5d72029553f08e9 32 TIGRFAM TIGR02616 tnaC_leader: tryptophanase leader peptide 12 31 2.1E-8 T 18-10-2018 IPR012620 Tryptophanese operon leader peptide GO:0031554|GO:0031556 CH53_3394 67a9b1e635933259deebb30663811fee 293 SUPERFAMILY SSF103481 41 142 2.48E-10 T 18-10-2018 CH53_3394 67a9b1e635933259deebb30663811fee 293 Pfam PF00892 EamA-like transporter family 156 289 1.8E-10 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_3394 67a9b1e635933259deebb30663811fee 293 Pfam PF00892 EamA-like transporter family 12 140 4.2E-14 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_3394 67a9b1e635933259deebb30663811fee 293 SUPERFAMILY SSF103481 188 290 8.37E-5 T 18-10-2018 CH53_3710 50658b4f8a48cb527a4c2738494b5ccd 150 SUPERFAMILY SSF52833 11 148 9.28E-34 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_3710 50658b4f8a48cb527a4c2738494b5ccd 150 Gene3D G3DSA:3.40.30.10 4 149 5.7E-36 T 18-10-2018 CH53_3710 50658b4f8a48cb527a4c2738494b5ccd 150 Pfam PF08534 Redoxin 14 135 2.6E-19 T 18-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CH53_2 4db5410ccc4d6521abda91646d941601 341 Gene3D G3DSA:3.30.160.60 303 341 5.6E-20 T 18-10-2018 CH53_2 4db5410ccc4d6521abda91646d941601 341 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 9 333 33.618 T 18-10-2018 IPR003770 Endolytic murein transglycosylase CH53_2 4db5410ccc4d6521abda91646d941601 341 Gene3D G3DSA:3.30.160.60 72 110 8.7E-24 T 18-10-2018 CH53_2 4db5410ccc4d6521abda91646d941601 341 Pfam PF02618 YceG-like family 44 329 2.4E-83 T 18-10-2018 IPR003770 Endolytic murein transglycosylase CH53_2 4db5410ccc4d6521abda91646d941601 341 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 6 337 7.4E-125 T 18-10-2018 IPR003770 Endolytic murein transglycosylase CH53_1619 a324dba591cf18e07b0836a049d64050 263 SUPERFAMILY SSF141868 31 256 3.4E-28 T 18-10-2018 IPR035919 EAL domain superfamily CH53_1619 a324dba591cf18e07b0836a049d64050 263 Pfam PF00563 EAL domain 32 248 7.8E-26 T 18-10-2018 IPR001633 EAL domain CH53_1619 a324dba591cf18e07b0836a049d64050 263 Gene3D G3DSA:3.20.20.450 26 258 2.4E-33 T 18-10-2018 IPR035919 EAL domain superfamily CH53_1619 a324dba591cf18e07b0836a049d64050 263 SMART SM00052 23 253 3.2E-10 T 18-10-2018 IPR001633 EAL domain CH53_3403 1e8bb293e14bce91b8efec994e93ba3f 269 Gene3D G3DSA:3.40.50.1000 3 263 3.4E-70 T 18-10-2018 IPR023214 HAD superfamily CH53_3403 1e8bb293e14bce91b8efec994e93ba3f 269 Gene3D G3DSA:3.30.1240.10 86 192 3.4E-70 T 18-10-2018 CH53_3403 1e8bb293e14bce91b8efec994e93ba3f 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 236 5.3E-23 T 18-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CH53_3403 1e8bb293e14bce91b8efec994e93ba3f 269 SUPERFAMILY SSF56784 1 266 8.15E-66 T 18-10-2018 IPR036412 HAD-like superfamily CH53_3403 1e8bb293e14bce91b8efec994e93ba3f 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 263 2.8E-61 T 18-10-2018 CH53_3403 1e8bb293e14bce91b8efec994e93ba3f 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 263 5.3E-58 T 18-10-2018 IPR000150 Cof family GO:0016787 CH53_523 bbbe533fe4938a6e32ab88337c36bf45 255 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 10 250 29.109 T 18-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 CH53_523 bbbe533fe4938a6e32ab88337c36bf45 255 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 16 232 3.8E-44 T 18-10-2018 CH53_1007 10f7aa7876c2bf19f2eb4d3a306f2379 68 Pfam PF03884 DNA gyrase inhibitor YacG 8 58 4.0E-23 T 18-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CH53_1007 10f7aa7876c2bf19f2eb4d3a306f2379 68 Gene3D G3DSA:3.30.50.10 3 65 3.6E-25 T 18-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 CH53_1007 10f7aa7876c2bf19f2eb4d3a306f2379 68 SUPERFAMILY SSF57716 6 63 5.7E-20 T 18-10-2018 CH53_1007 10f7aa7876c2bf19f2eb4d3a306f2379 68 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 17.841 T 18-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CH53_2614 5a4dc98269dc1fca46b760000be59a8a 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 192 2.6E-50 T 18-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CH53_2614 5a4dc98269dc1fca46b760000be59a8a 198 SUPERFAMILY SSF100950 10 198 1.67E-57 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_2614 5a4dc98269dc1fca46b760000be59a8a 198 PIRSF PIRSF006806 7 195 2.5E-39 T 18-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CH53_2614 5a4dc98269dc1fca46b760000be59a8a 198 Gene3D G3DSA:3.40.50.10420 4 197 1.2E-58 T 18-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CH53_2614 5a4dc98269dc1fca46b760000be59a8a 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 192 1.6E-55 T 18-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CH53_4420 6c56a080364c94ec1095765d0bc6d440 288 SUPERFAMILY SSF56112 31 285 1.36E-37 T 18-10-2018 IPR011009 Protein kinase-like domain superfamily CH53_4420 6c56a080364c94ec1095765d0bc6d440 288 Pfam PF01636 Phosphotransferase enzyme family 37 236 1.3E-14 T 18-10-2018 IPR002575 Aminoglycoside phosphotransferase CH53_4420 6c56a080364c94ec1095765d0bc6d440 288 Gene3D G3DSA:3.90.1200.10 109 286 6.0E-19 T 18-10-2018 CH53_4420 6c56a080364c94ec1095765d0bc6d440 288 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 30 284 8.2E-98 T 18-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 CH53_4420 6c56a080364c94ec1095765d0bc6d440 288 Hamap MF_01604 Thiamine kinase [thiK]. 9 284 41.519 T 18-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 CH53_3377 7a1fb92ea13f6e02fa3b593d079d90e7 189 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 13 132 4.2E-37 T 18-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 CH53_3377 7a1fb92ea13f6e02fa3b593d079d90e7 189 Pfam PF05175 Methyltransferase small domain 23 85 3.0E-7 T 18-10-2018 IPR007848 Methyltransferase small domain GO:0008168 CH53_3377 7a1fb92ea13f6e02fa3b593d079d90e7 189 SUPERFAMILY SSF53335 2 147 7.07E-26 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_3377 7a1fb92ea13f6e02fa3b593d079d90e7 189 Gene3D G3DSA:3.40.50.150 1 189 8.3E-59 T 18-10-2018 CH53_542 a80d0e395900c1490d854a683552cdfc 291 SUPERFAMILY SSF161098 16 268 4.71E-53 T 18-10-2018 IPR035906 MetI-like superfamily CH53_542 a80d0e395900c1490d854a683552cdfc 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 267 8.6E-15 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_542 a80d0e395900c1490d854a683552cdfc 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 15 275 1.5E-107 T 18-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CH53_542 a80d0e395900c1490d854a683552cdfc 291 Gene3D G3DSA:1.10.3720.10 20 276 1.5E-59 T 18-10-2018 IPR035906 MetI-like superfamily CH53_542 a80d0e395900c1490d854a683552cdfc 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 3.0E-114 T 18-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 CH53_3774 3713abcdebedc8a828d627e12bcf7f2e 313 Gene3D G3DSA:3.40.50.720 15 308 1.3E-112 T 18-10-2018 CH53_3774 3713abcdebedc8a828d627e12bcf7f2e 313 Hamap MF_01666 Glyoxylate/hydroxypyruvate reductase A [ghrA]. 1 313 63.612 T 18-10-2018 IPR023514 Glyoxylate/hydroxypyruvate reductase A GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 CH53_3774 3713abcdebedc8a828d627e12bcf7f2e 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 278 3.3E-43 T 18-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CH53_3774 3713abcdebedc8a828d627e12bcf7f2e 313 SUPERFAMILY SSF51735 97 278 1.34E-44 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3774 3713abcdebedc8a828d627e12bcf7f2e 313 Gene3D G3DSA:3.40.50.720 94 279 1.3E-112 T 18-10-2018 CH53_2397 ced58169713ea4d28573dc4ebef3c8b3 347 SUPERFAMILY SSF81345 18 342 1.12E-69 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_2397 ced58169713ea4d28573dc4ebef3c8b3 347 Pfam PF01032 FecCD transport family 36 342 1.1E-81 T 18-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CH53_2397 ced58169713ea4d28573dc4ebef3c8b3 347 Gene3D G3DSA:1.10.3470.10 22 346 5.6E-86 T 18-10-2018 IPR037294 ABC transporter, BtuC-like CH53_2733 00121b9dce9f0d3c9a0c1b7f0ba5f4e8 394 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 16 391 3.5E-169 T 18-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 CH53_2733 00121b9dce9f0d3c9a0c1b7f0ba5f4e8 394 Pfam PF02684 Lipid-A-disaccharide synthetase 20 388 6.7E-141 T 18-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 CH53_2733 00121b9dce9f0d3c9a0c1b7f0ba5f4e8 394 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 17 393 42.406 T 18-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 CH53_2733 00121b9dce9f0d3c9a0c1b7f0ba5f4e8 394 SUPERFAMILY SSF53756 20 366 1.41E-25 T 18-10-2018 CH53_1518 519330e0386ec868c44c1104b1c6bce8 135 Pfam PF02566 OsmC-like protein 30 127 7.0E-19 T 18-10-2018 IPR003718 OsmC/Ohr family CH53_1518 519330e0386ec868c44c1104b1c6bce8 135 Gene3D G3DSA:3.30.300.20 35 133 6.1E-31 T 18-10-2018 IPR015946 K homology domain-like, alpha/beta CH53_1518 519330e0386ec868c44c1104b1c6bce8 135 Gene3D G3DSA:2.20.25.10 1 34 1.6E-21 T 18-10-2018 CH53_1518 519330e0386ec868c44c1104b1c6bce8 135 SUPERFAMILY SSF82784 1 132 6.81E-42 T 18-10-2018 IPR036102 OsmC/Ohr superfamily CH53_810 5fd208aaec6b4afaf6bce5ecfb9f75bd 263 Pfam PF01578 Cytochrome C assembly protein 37 261 5.1E-42 T 18-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CH53_826 bc506d1083b639152af5d33ed7f0373f 314 Gene3D G3DSA:3.40.50.1360 54 313 4.8E-82 T 18-10-2018 CH53_826 bc506d1083b639152af5d33ed7f0373f 314 Pfam PF01047 MarR family 14 51 9.7E-6 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CH53_826 bc506d1083b639152af5d33ed7f0373f 314 Gene3D G3DSA:1.10.10.60 1 53 3.7E-17 T 18-10-2018 CH53_826 bc506d1083b639152af5d33ed7f0373f 314 SUPERFAMILY SSF46785 13 55 8.71E-5 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_826 bc506d1083b639152af5d33ed7f0373f 314 SUPERFAMILY SSF100950 64 314 3.1E-65 T 18-10-2018 IPR037171 NagB/RpiA transferase-like CH53_826 bc506d1083b639152af5d33ed7f0373f 314 Pfam PF04198 Putative sugar-binding domain 64 314 4.1E-62 T 18-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 CH53_1092 ae5883378fbbd53258b96acc38c88731 178 Pfam PF01931 Protein of unknown function DUF84 7 165 2.9E-50 T 18-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 CH53_1092 ae5883378fbbd53258b96acc38c88731 178 SUPERFAMILY SSF52972 1 169 1.31E-54 T 18-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CH53_1092 ae5883378fbbd53258b96acc38c88731 178 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 170 4.3E-48 T 18-10-2018 IPR002786 Non-canonical purine NTP phosphatase CH53_1092 ae5883378fbbd53258b96acc38c88731 178 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 28.729 T 18-10-2018 IPR002786 Non-canonical purine NTP phosphatase CH53_1092 ae5883378fbbd53258b96acc38c88731 178 Gene3D G3DSA:3.90.950.10 1 176 2.7E-59 T 18-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CH53_4036 a76079b3df8e8c1237c9321bbf14d802 109 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 101 3.1E-23 T 18-10-2018 IPR009241 Toxin HigB-like CH53_3634 93ad015157d12c20ea129f0819fd6ea6 67 Pfam PF13973 Domain of unknown function (DUF4222) 11 66 5.3E-15 T 18-10-2018 IPR025317 Protein of unknown function DUF4222 CH53_1516 00763fcccce80b281fc8dcd631ff295f 78 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 68 5.0E-26 T 18-10-2018 IPR010648 Uncharacterised protein family UPF0270 CH53_1516 00763fcccce80b281fc8dcd631ff295f 78 Gene3D G3DSA:1.10.10.610 1 75 4.5E-28 T 18-10-2018 IPR036685 YehU-like superfamily CH53_1516 00763fcccce80b281fc8dcd631ff295f 78 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.024 T 18-10-2018 IPR010648 Uncharacterised protein family UPF0270 CH53_1516 00763fcccce80b281fc8dcd631ff295f 78 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 2.2E-32 T 18-10-2018 IPR010648 Uncharacterised protein family UPF0270 CH53_1516 00763fcccce80b281fc8dcd631ff295f 78 PIRSF PIRSF006169 1 76 3.6E-35 T 18-10-2018 IPR010648 Uncharacterised protein family UPF0270 CH53_1516 00763fcccce80b281fc8dcd631ff295f 78 SUPERFAMILY SSF118001 1 71 2.09E-27 T 18-10-2018 IPR036685 YehU-like superfamily CH53_2479 57a2683a37600940c94625530631d229 214 SUPERFAMILY SSF55729 8 154 1.59E-6 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_2479 57a2683a37600940c94625530631d229 214 Pfam PF12261 Thermostable hemolysin 16 185 3.0E-58 T 18-10-2018 IPR022050 Thermostable hemolysin CH53_289 2e387b9bbc6ea290e999602a1d5bd93a 502 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 212 375 2.0E-20 T 18-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain CH53_289 2e387b9bbc6ea290e999602a1d5bd93a 502 Pfam PF17482 Phage tail sheath C-terminal domain 384 496 4.9E-9 T 18-10-2018 IPR020287 Tail sheath protein, C-terminal domain CH53_289 2e387b9bbc6ea290e999602a1d5bd93a 502 PIRSF PIRSF007349 1 498 2.3E-161 T 18-10-2018 IPR007067 Tail sheath protein CH53_1740 63c91c551e4ea629773e459cb260a078 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 4.3E-18 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_1740 63c91c551e4ea629773e459cb260a078 219 SUPERFAMILY SSF161098 10 202 2.75E-43 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1740 63c91c551e4ea629773e459cb260a078 219 Gene3D G3DSA:1.10.3720.10 5 219 2.8E-47 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2396 8ffce1ee9034dfd68ec4a58226bae62b 277 Pfam PF00005 ABC transporter 35 182 1.6E-32 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CH53_2396 8ffce1ee9034dfd68ec4a58226bae62b 277 SMART SM00382 43 232 3.2E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain CH53_2396 8ffce1ee9034dfd68ec4a58226bae62b 277 Gene3D G3DSA:3.40.50.300 19 271 3.7E-66 T 18-10-2018 CH53_2396 8ffce1ee9034dfd68ec4a58226bae62b 277 SUPERFAMILY SSF52540 19 244 2.09E-59 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH53_2396 8ffce1ee9034dfd68ec4a58226bae62b 277 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CH53_3226 dff7242dc8d7ac4a8cf0cc782584b75b 310 SUPERFAMILY SSF53850 29 308 6.35E-61 T 18-10-2018 CH53_3226 dff7242dc8d7ac4a8cf0cc782584b75b 310 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 29 304 4.0E-56 T 18-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 CH53_3226 dff7242dc8d7ac4a8cf0cc782584b75b 310 Gene3D G3DSA:3.40.190.10 32 306 1.8E-98 T 18-10-2018 CH53_3226 dff7242dc8d7ac4a8cf0cc782584b75b 310 Gene3D G3DSA:3.40.190.120 133 246 1.8E-98 T 18-10-2018 CH53_1393 2b5127576b9eac007ba598bf4aeb655c 330 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 28 323 2.3E-116 T 18-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CH53_1393 2b5127576b9eac007ba598bf4aeb655c 330 SUPERFAMILY SSF53686 10 320 1.1E-92 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH53_1393 2b5127576b9eac007ba598bf4aeb655c 330 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 18-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CH53_1393 2b5127576b9eac007ba598bf4aeb655c 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 312 3.5E-77 T 18-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CH53_1393 2b5127576b9eac007ba598bf4aeb655c 330 Gene3D G3DSA:3.40.50.1100 15 317 1.0E-124 T 18-10-2018 CH53_1393 2b5127576b9eac007ba598bf4aeb655c 330 Gene3D G3DSA:3.40.50.1100 57 153 1.0E-124 T 18-10-2018 CH53_3719 03d56fce3ce43ef89da2b50c25944035 155 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 1 137 3.0E-55 T 18-10-2018 CH53_3719 03d56fce3ce43ef89da2b50c25944035 155 Pfam PF13994 PgaD-like protein 5 134 1.1E-32 T 18-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 CH53_3719 03d56fce3ce43ef89da2b50c25944035 155 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 4 138 7.0E-35 T 18-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 CH53_2665 d94d17ab69efdd334f942d2040c91c57 119 Gene3D G3DSA:1.20.58.1630 24 118 6.8E-17 T 18-10-2018 IPR038432 PulS/OutS-like superfamily CH53_2665 d94d17ab69efdd334f942d2040c91c57 119 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 17 114 1.4E-14 T 18-10-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like CH53_3450 2d4baa7894d6e8d35f80b1cccb32b661 182 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 14 176 1.7E-52 T 18-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CH53_3450 2d4baa7894d6e8d35f80b1cccb32b661 182 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 15 176 1.9E-53 T 18-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CH53_1958 a1db4863a820a5b57a88e88da21effb7 84 Pfam PF06530 Phage antitermination protein Q 2 53 3.1E-11 T 18-10-2018 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 CH53_997 87d33cf175690cacc29aca52f76a072a 454 PIRSF PIRSF006060 1 452 6.8E-72 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_997 87d33cf175690cacc29aca52f76a072a 454 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 18-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CH53_997 87d33cf175690cacc29aca52f76a072a 454 Gene3D G3DSA:1.20.1740.10 10 454 7.9E-58 T 18-10-2018 CH53_997 87d33cf175690cacc29aca52f76a072a 454 Pfam PF00324 Amino acid permease 18 453 3.6E-118 T 18-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CH53_3699 16a32d063db5b70f241cef951899236c 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 2.1E-20 T 18-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CH53_3699 16a32d063db5b70f241cef951899236c 104 Gene3D G3DSA:3.40.50.2300 1 103 4.6E-36 T 18-10-2018 CH53_3699 16a32d063db5b70f241cef951899236c 104 SUPERFAMILY SSF52794 1 101 1.1E-35 T 18-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CH53_2920 c03fb0455508a8cadf26fc70590cd3ac 269 Pfam PF01963 TraB family 32 265 7.9E-38 T 18-10-2018 IPR002816 Pheromone shutdown, TraB CH53_2281 45c2f13abc6aaaabe94af39e13db2935 560 SUPERFAMILY SSF53474 53 513 1.08E-16 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_1624 cf665ba429d44faa359a92249d5e44e5 159 Pfam PF00754 F5/8 type C domain 27 145 2.2E-17 T 18-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain CH53_1624 cf665ba429d44faa359a92249d5e44e5 159 Gene3D G3DSA:2.60.120.260 17 159 7.6E-39 T 18-10-2018 IPR008979 Galactose-binding-like domain superfamily CH53_1624 cf665ba429d44faa359a92249d5e44e5 159 SUPERFAMILY SSF49785 23 147 3.62E-22 T 18-10-2018 IPR008979 Galactose-binding-like domain superfamily CH53_3921 6333e6b470db54655ab245328c2ec5be 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 3.1E-127 T 18-10-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 CH53_3921 6333e6b470db54655ab245328c2ec5be 231 SUPERFAMILY SSF53639 1 223 4.12E-68 T 18-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CH53_3921 6333e6b470db54655ab245328c2ec5be 231 SMART SM01007 7 198 3.5E-66 T 18-10-2018 IPR001303 Class II aldolase/adducin N-terminal CH53_3921 6333e6b470db54655ab245328c2ec5be 231 Gene3D G3DSA:3.40.225.10 1 231 2.4E-60 T 18-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CH53_3921 6333e6b470db54655ab245328c2ec5be 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 1.3E-44 T 18-10-2018 IPR001303 Class II aldolase/adducin N-terminal CH53_17 595a5397e22fd00b01abf19aa8ae690b 81 Pfam PF06183 DinI-like family 14 78 1.2E-28 T 18-10-2018 IPR010391 DNA damage-inducible protein DinI-like CH53_17 595a5397e22fd00b01abf19aa8ae690b 81 SUPERFAMILY SSF54857 1 80 4.18E-28 T 18-10-2018 IPR036687 DinI-like superfamily CH53_17 595a5397e22fd00b01abf19aa8ae690b 81 Gene3D G3DSA:3.30.910.10 1 81 6.3E-35 T 18-10-2018 IPR036687 DinI-like superfamily CH53_288 fbc518194047749f768f8f326bb8fa33 122 Pfam PF10618 Phage tail tube protein 6 121 4.5E-42 T 18-10-2018 IPR019596 Bacteriophage Mu, GpM, tail tube CH53_3607 6e1fbb326e002ba285a7fb462a1e336b 473 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 18-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CH53_3607 6e1fbb326e002ba285a7fb462a1e336b 473 Pfam PF00324 Amino acid permease 27 464 1.6E-113 T 18-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CH53_3607 6e1fbb326e002ba285a7fb462a1e336b 473 PIRSF PIRSF006060 2 473 2.7E-70 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_3607 6e1fbb326e002ba285a7fb462a1e336b 473 Gene3D G3DSA:1.20.1740.10 17 472 2.5E-60 T 18-10-2018 CH53_1667 0e4645202cd24975f7c984b3898061a1 328 SUPERFAMILY SSF49401 206 327 2.69E-9 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_1667 0e4645202cd24975f7c984b3898061a1 328 Pfam PF00419 Fimbrial protein 207 327 1.6E-10 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_2812 ac77a4587ef4f71214d21c9d008e6887 256 SUPERFAMILY SSF53335 12 250 4.45E-45 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_2812 ac77a4587ef4f71214d21c9d008e6887 256 Gene3D G3DSA:3.40.50.150 25 254 1.0E-55 T 18-10-2018 CH53_2812 ac77a4587ef4f71214d21c9d008e6887 256 Pfam PF08241 Methyltransferase domain 50 146 7.9E-26 T 18-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CH53_3565 8b7bb0609de9bed9bcab8530cad5f3b3 124 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 14 82 1.9E-20 T 18-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CH53_3565 8b7bb0609de9bed9bcab8530cad5f3b3 124 Pfam PF04347 Flagellar biosynthesis protein, FliO 26 111 3.7E-21 T 18-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CH53_2590 50ad9f6ceca1dabc106f02aa9c1d78a7 294 SUPERFAMILY SSF56317 1 285 1.31E-81 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CH53_2590 50ad9f6ceca1dabc106f02aa9c1d78a7 294 Pfam PF00795 Carbon-nitrogen hydrolase 5 268 2.0E-53 T 18-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CH53_2590 50ad9f6ceca1dabc106f02aa9c1d78a7 294 Gene3D G3DSA:3.60.110.10 1 293 3.0E-105 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CH53_2590 50ad9f6ceca1dabc106f02aa9c1d78a7 294 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 4 285 5.3E-146 T 18-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 CH53_448 3612b2d14466c221b87a4a97762c94d6 77 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 57 1.9E-15 T 18-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CH53_448 3612b2d14466c221b87a4a97762c94d6 77 Pfam PF04995 Heme exporter protein D (CcmD) 15 57 1.2E-14 T 18-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CH53_159 201aceed2f33cf35b8269a3771714c3c 588 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 3.5E-79 T 18-10-2018 IPR003776 YcaO-like domain CH53_159 201aceed2f33cf35b8269a3771714c3c 588 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 6.2E-159 T 18-10-2018 IPR003776 YcaO-like domain CH53_83 0671c71050863908a722a7707ff78ae5 115 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 100 4.7E-17 T 18-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 CH53_83 0671c71050863908a722a7707ff78ae5 115 Pfam PF01740 STAS domain 3 99 2.9E-12 T 18-10-2018 IPR002645 STAS domain CH53_83 0671c71050863908a722a7707ff78ae5 115 Gene3D G3DSA:3.30.750.24 1 113 8.9E-28 T 18-10-2018 IPR036513 STAS domain superfamily CH53_83 0671c71050863908a722a7707ff78ae5 115 SUPERFAMILY SSF52091 1 107 6.28E-22 T 18-10-2018 IPR036513 STAS domain superfamily CH53_1304 a1647d63cc7b5ed26fc108b7516dae8e 87 Gene3D G3DSA:3.30.1660.10 21 87 3.3E-24 T 18-10-2018 IPR025543 Dodecin-like CH53_1304 a1647d63cc7b5ed26fc108b7516dae8e 87 SUPERFAMILY SSF159871 4 87 2.22E-26 T 18-10-2018 IPR036275 YdgH-like superfamily CH53_1304 a1647d63cc7b5ed26fc108b7516dae8e 87 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 3.0E-23 T 18-10-2018 IPR010854 Domain of unknown function DUF1471 CH53_2910 fca38ba3dabfc0f4082080e45eac5e76 342 SUPERFAMILY SSF53756 3 338 8.03E-72 T 18-10-2018 CH53_2910 fca38ba3dabfc0f4082080e45eac5e76 342 Pfam PF00534 Glycosyl transferases group 1 149 307 2.6E-32 T 18-10-2018 IPR001296 Glycosyl transferase, family 1 CH53_2910 fca38ba3dabfc0f4082080e45eac5e76 342 Pfam PF13439 Glycosyltransferase Family 4 4 141 8.3E-15 T 18-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CH53_2910 fca38ba3dabfc0f4082080e45eac5e76 342 Gene3D G3DSA:3.40.50.2000 4 337 5.1E-73 T 18-10-2018 CH53_2910 fca38ba3dabfc0f4082080e45eac5e76 342 Gene3D G3DSA:3.40.50.2000 138 324 5.1E-73 T 18-10-2018 CH53_1236 8365ffe4e6feb2fbd081c73bc6d51807 364 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 1.6E-117 T 18-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 CH53_1236 8365ffe4e6feb2fbd081c73bc6d51807 364 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 5.8E-75 T 18-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CH53_3973 7087c86cb6aa43aec98e23444e0d5f69 238 Pfam PF00196 Bacterial regulatory proteins, luxR family 162 208 3.2E-6 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3973 7087c86cb6aa43aec98e23444e0d5f69 238 Pfam PF08448 PAS fold 28 130 7.8E-7 T 18-10-2018 IPR013656 PAS fold-4 CH53_3973 7087c86cb6aa43aec98e23444e0d5f69 238 Gene3D G3DSA:1.10.10.10 136 217 9.0E-8 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3973 7087c86cb6aa43aec98e23444e0d5f69 238 SUPERFAMILY SSF46894 144 211 3.74E-10 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_3973 7087c86cb6aa43aec98e23444e0d5f69 238 SMART SM00421 159 216 8.6E-4 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CH53_3728 b6af9125de9fef655abef441643ef0c5 60 Pfam PF10617 Protein of unknown function (DUF2474) 22 59 9.5E-20 T 18-10-2018 IPR018895 Protein of unknown function DUF2474 CH53_3100 160c1250fd71b30bf177cccb0179912f 467 Gene3D G3DSA:2.40.160.10 24 444 1.7E-33 T 18-10-2018 IPR023614 Porin domain superfamily CH53_3100 160c1250fd71b30bf177cccb0179912f 467 Pfam PF03573 outer membrane porin, OprD family 33 436 5.8E-23 T 18-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 CH53_1025 4e37b35074558ab8e9e58d30cfbe536b 106 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 103 16.977 T 18-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 CH53_1025 4e37b35074558ab8e9e58d30cfbe536b 106 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 22 103 1.2E-27 T 18-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 CH53_1025 4e37b35074558ab8e9e58d30cfbe536b 106 Pfam PF04999 Cell division protein FtsL 10 104 5.0E-34 T 18-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 CH53_1526 ee512a48cc14e6b885e1fa595d322e4b 189 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 187 8.1E-48 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CH53_1526 ee512a48cc14e6b885e1fa595d322e4b 189 Gene3D G3DSA:2.40.100.10 24 189 3.2E-69 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily CH53_1526 ee512a48cc14e6b885e1fa595d322e4b 189 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 18-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CH53_1526 ee512a48cc14e6b885e1fa595d322e4b 189 SUPERFAMILY SSF50891 26 188 2.34E-57 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily CH53_1526 ee512a48cc14e6b885e1fa595d322e4b 189 PIRSF PIRSF001467 15 187 5.2E-29 T 18-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CH53_1526 ee512a48cc14e6b885e1fa595d322e4b 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 5.8E-11 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CH53_1526 ee512a48cc14e6b885e1fa595d322e4b 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 5.8E-11 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CH53_1526 ee512a48cc14e6b885e1fa595d322e4b 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 158 5.8E-11 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CH53_4278 5ad41c6948d15e9cd067f663b183c343 415 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 5 405 1.8E-172 T 18-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type CH53_4278 5ad41c6948d15e9cd067f663b183c343 415 Pfam PF04403 Paraquat-inducible protein A 250 405 3.2E-46 T 18-10-2018 IPR007498 Intermembrane transport protein PqiA-like CH53_4278 5ad41c6948d15e9cd067f663b183c343 415 Pfam PF04403 Paraquat-inducible protein A 53 204 1.5E-39 T 18-10-2018 IPR007498 Intermembrane transport protein PqiA-like CH53_1662 a3d8f2d2d9cc8818cdcf3667b46d6773 394 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 384 2.2E-49 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_4092 9d57ed0c491557ccd46f0976e4d7680a 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 9.8E-95 T 18-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CH53_4092 9d57ed0c491557ccd46f0976e4d7680a 365 SUPERFAMILY SSF51395 3 364 6.02E-125 T 18-10-2018 CH53_4092 9d57ed0c491557ccd46f0976e4d7680a 365 Gene3D G3DSA:3.20.20.70 3 365 1.8E-142 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_1321 421aa9b6b5c6c9d42ae6ef2819eb27f0 260 Gene3D G3DSA:3.10.450.350 167 259 9.1E-13 T 18-10-2018 CH53_1321 421aa9b6b5c6c9d42ae6ef2819eb27f0 260 Pfam PF08525 Opacity-associated protein A N-terminal motif 100 126 1.8E-8 T 18-10-2018 IPR013731 Opacity-associated protein A, N-terminal CH53_1321 421aa9b6b5c6c9d42ae6ef2819eb27f0 260 Pfam PF04225 Opacity-associated protein A LysM-like domain 175 259 7.7E-38 T 18-10-2018 IPR007340 Opacity-associated protein A CH53_804 a5110f08d911241bf628dfb47e2b60bc 255 Pfam PF04338 Protein of unknown function, DUF481 50 254 1.7E-56 T 18-10-2018 IPR007433 Protein of unknown function DUF481 CH53_4354 6bf953825696fd8886cb07adb8c0ad57 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 265 2.9E-124 T 18-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CH53_4354 6bf953825696fd8886cb07adb8c0ad57 265 Pfam PF03609 PTS system sorbose-specific iic component 6 237 9.5E-75 T 18-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CH53_2274 50f41c25b3f21bcce746d5705d7be1a4 191 SMART SM00749 51 114 2.9E-8 T 18-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria CH53_2274 50f41c25b3f21bcce746d5705d7be1a4 191 SMART SM00749 129 190 0.0021 T 18-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria CH53_2274 50f41c25b3f21bcce746d5705d7be1a4 191 Pfam PF04972 BON domain 46 114 7.6E-14 T 18-10-2018 IPR007055 BON domain CH53_2274 50f41c25b3f21bcce746d5705d7be1a4 191 Pfam PF04972 BON domain 125 190 3.1E-17 T 18-10-2018 IPR007055 BON domain CH53_449 b2196a0cdb9ca14b7984456ed8ea37e3 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 8.7E-63 T 18-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_449 b2196a0cdb9ca14b7984456ed8ea37e3 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 8.7E-63 T 18-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_449 b2196a0cdb9ca14b7984456ed8ea37e3 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 8.7E-63 T 18-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_449 b2196a0cdb9ca14b7984456ed8ea37e3 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 8.7E-63 T 18-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_449 b2196a0cdb9ca14b7984456ed8ea37e3 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 8.7E-63 T 18-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_449 b2196a0cdb9ca14b7984456ed8ea37e3 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 8.7E-63 T 18-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_449 b2196a0cdb9ca14b7984456ed8ea37e3 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 2.5E-83 T 18-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CH53_449 b2196a0cdb9ca14b7984456ed8ea37e3 245 Pfam PF01578 Cytochrome C assembly protein 14 184 1.1E-32 T 18-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CH53_803 523cb512887e172255ef277265ac3d32 447 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 443 3.1E-159 T 18-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CH53_803 523cb512887e172255ef277265ac3d32 447 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 379 2.1E-151 T 18-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CH53_803 523cb512887e172255ef277265ac3d32 447 PIRSF PIRSF004539 1 447 3.8E-186 T 18-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CH53_4405 2cea5aea7533b69fdaf8c6e1bdce531c 207 SUPERFAMILY SSF56925 24 167 2.25E-10 T 18-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CH53_4405 2cea5aea7533b69fdaf8c6e1bdce531c 207 Pfam PF13505 Outer membrane protein beta-barrel domain 7 188 1.9E-8 T 18-10-2018 IPR027385 Outer membrane protein beta-barrel CH53_1334 d04668ef6fe2eeb29b1e37602c116cc5 66 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 2.2E-22 T 18-10-2018 IPR019201 Protein of unknown function DUF2065 CH53_3231 11935af94d5df411c7abc6c29c789a04 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 6.0E-18 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3231 11935af94d5df411c7abc6c29c789a04 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.0E-18 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3231 11935af94d5df411c7abc6c29c789a04 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 6.0E-18 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3231 11935af94d5df411c7abc6c29c789a04 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.0E-18 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3231 11935af94d5df411c7abc6c29c789a04 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 6.0E-18 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CH53_3231 11935af94d5df411c7abc6c29c789a04 248 SUPERFAMILY SSF51735 14 246 9.36E-48 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily CH53_3231 11935af94d5df411c7abc6c29c789a04 248 Gene3D G3DSA:3.40.50.720 15 247 8.7E-54 T 18-10-2018 CH53_3231 11935af94d5df411c7abc6c29c789a04 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 27 245 4.9E-36 T 18-10-2018 CH53_3635 241be5248d5f6e7d736c4e58933e7e4a 335 Gene3D G3DSA:1.10.10.10 3 113 8.1E-13 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3635 241be5248d5f6e7d736c4e58933e7e4a 335 Pfam PF09524 Conserved phage C-terminus (Phg_2220_C) 177 245 2.8E-19 T 18-10-2018 IPR011741 Phage conserved hypothetical protein, C-terminal CH53_3635 241be5248d5f6e7d736c4e58933e7e4a 335 Pfam PF13730 Helix-turn-helix domain 25 70 2.0E-10 T 18-10-2018 CH53_3553 9d4290b5681f5fdfcd45b3e02cd3ef40 230 Pfam PF13860 FlgD Ig-like domain 119 187 2.6E-21 T 18-10-2018 IPR025965 FlgD Ig-like domain CH53_3553 9d4290b5681f5fdfcd45b3e02cd3ef40 230 Gene3D G3DSA:2.30.30.910 90 224 2.8E-34 T 18-10-2018 CH53_3553 9d4290b5681f5fdfcd45b3e02cd3ef40 230 Pfam PF13861 FlgD Tudor-like domain 89 227 1.3E-17 T 18-10-2018 IPR025963 FlgD Tudor-like domain CH53_3553 9d4290b5681f5fdfcd45b3e02cd3ef40 230 Pfam PF03963 Flagellar hook capping protein - N-terminal region 15 81 1.2E-23 T 18-10-2018 IPR005648 Flagellar hook capping protein CH53_3553 9d4290b5681f5fdfcd45b3e02cd3ef40 230 Gene3D G3DSA:2.60.40.4070 106 196 2.8E-34 T 18-10-2018 CH53_1142 d3a5065bb8b483d7d9393c87032f5759 288 Pfam PF10014 2OG-Fe dioxygenase 91 282 5.5E-28 T 18-10-2018 IPR018724 2OG-Fe dioxygenase CH53_1142 d3a5065bb8b483d7d9393c87032f5759 288 Gene3D G3DSA:2.60.120.620 83 287 3.6E-25 T 18-10-2018 CH53_3009 2640580aaddcb56b882334928eb962e2 34 Gene3D G3DSA:3.20.20.100 1 34 1.4E-6 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CH53_3197 59886b7aa38fe3b810605fea36246fe3 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 232 4.1E-61 T 18-10-2018 IPR006214 Bax inhibitor 1-related CH53_242 66bee400752abf20949c4c8f066c9b9c 291 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 35 289 5.3E-92 T 18-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CH53_2107 ee6b17314d84418b06a2b4bf0a5afa96 196 Gene3D G3DSA:1.20.1590.10 3 194 1.0E-63 T 18-10-2018 IPR023381 YP001051499.1-like domain superfamily CH53_2107 ee6b17314d84418b06a2b4bf0a5afa96 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 3.0E-76 T 18-10-2018 IPR007338 Protein of unknown function DUF416 CH53_1063 10b8757f5777f853761ecfa8ecdc220e 265 Pfam PF06738 Putative threonine/serine exporter 21 260 8.3E-69 T 18-10-2018 IPR010619 Putative threonine/serine exporter CH53_1232 60aa0ca7a02368cf3aa928400948dad8 628 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 391 413 4.7E-18 T 18-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CH53_1232 60aa0ca7a02368cf3aa928400948dad8 628 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 416 430 4.7E-18 T 18-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CH53_1232 60aa0ca7a02368cf3aa928400948dad8 628 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 178 197 4.7E-18 T 18-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CH53_1232 60aa0ca7a02368cf3aa928400948dad8 628 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 116 128 4.7E-18 T 18-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CH53_1232 60aa0ca7a02368cf3aa928400948dad8 628 PIRSF PIRSF015855 5 626 7.9E-182 T 18-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CH53_1232 60aa0ca7a02368cf3aa928400948dad8 628 Pfam PF01555 DNA methylase 116 445 1.3E-41 T 18-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CH53_1232 60aa0ca7a02368cf3aa928400948dad8 628 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 18-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CH53_1232 60aa0ca7a02368cf3aa928400948dad8 628 SUPERFAMILY SSF53335 83 461 1.39E-71 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_1710 051451c423f70bbe468f481e4c7fe02e 112 Pfam PF07119 Protein of unknown function (DUF1375) 13 76 2.0E-15 T 18-10-2018 IPR010780 Protein of unknown function DUF1375 CH53_895 0fc9c04110c7177d505d93a8e79c6596 270 Gene3D G3DSA:2.60.40.1090 157 270 7.3E-6 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_1245 37b3a099ea5cf506cb0c16836248e263 349 SUPERFAMILY SSF161098 106 337 4.71E-20 T 18-10-2018 IPR035906 MetI-like superfamily CH53_1245 37b3a099ea5cf506cb0c16836248e263 349 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 349 3.2E-42 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_1245 37b3a099ea5cf506cb0c16836248e263 349 Gene3D G3DSA:1.10.3720.10 101 345 3.2E-27 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2388 82840772a498cfe4a49e335463d11622 197 SMART SM00862 28 102 0.0053 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_2388 82840772a498cfe4a49e335463d11622 197 Gene3D G3DSA:1.10.10.10 3 105 3.0E-7 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2388 82840772a498cfe4a49e335463d11622 197 SUPERFAMILY SSF46894 18 99 2.66E-7 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_2388 82840772a498cfe4a49e335463d11622 197 Pfam PF00486 Transcriptional regulatory protein, C terminal 30 99 8.3E-5 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_998 ec026868f4ceb88c1e9adcf56222bfb3 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 4.4E-160 T 18-10-2018 IPR031347 Protein AmpE CH53_2446 514712f646077e7f86aa07a31968fe24 159 Pfam PF15941 FidL-like putative membrane protein 71 156 3.1E-13 T 18-10-2018 IPR031854 Putative membrane protein FidL-like CH53_2315 63a0e7d6a81d91d813937dca0dcfb5b4 189 Pfam PF03729 Short repeat of unknown function (DUF308) 26 97 3.1E-13 T 18-10-2018 IPR005325 Protein of unknown function DUF308, membrane CH53_2315 63a0e7d6a81d91d813937dca0dcfb5b4 189 Pfam PF03729 Short repeat of unknown function (DUF308) 84 152 1.3E-9 T 18-10-2018 IPR005325 Protein of unknown function DUF308, membrane CH53_2290 ee0b3db0efe906c457e6e357da698596 131 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 16 127 1.0E-19 T 18-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III CH53_2510 d07169963b717063d96e50796a983a30 340 Gene3D G3DSA:3.40.50.10950 14 319 1.0E-111 T 18-10-2018 CH53_2510 d07169963b717063d96e50796a983a30 340 Gene3D G3DSA:3.40.50.10750 140 296 1.0E-111 T 18-10-2018 CH53_2510 d07169963b717063d96e50796a983a30 340 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 17 318 1.1E-94 T 18-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CH53_2510 d07169963b717063d96e50796a983a30 340 SUPERFAMILY SSF53659 3 323 2.3E-77 T 18-10-2018 CH53_2510 d07169963b717063d96e50796a983a30 340 Pfam PF01515 Phosphate acetyl/butaryl transferase 2 319 5.1E-110 T 18-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CH53_2510 d07169963b717063d96e50796a983a30 340 PIRSF PIRSF000428 1 325 4.2E-100 T 18-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CH53_497 3e79b343923f0763b562503dd6e391b0 174 SUPERFAMILY SSF81342 3 174 2.2E-27 T 18-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CH53_497 3e79b343923f0763b562503dd6e391b0 174 Pfam PF01292 Prokaryotic cytochrome b561 4 173 2.0E-21 T 18-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CH53_4320 5ac8e0d431612d559f01cf11aaa0784f 108 Pfam PF07377 Protein of unknown function (DUF1493) 1 108 7.4E-43 T 18-10-2018 IPR010862 Protein of unknown function DUF1493 CH53_440 ea173508a4c603866c08fd3f2ef424ff 98 Pfam PF04175 Protein of unknown function (DUF406) 8 98 5.2E-39 T 18-10-2018 IPR005272 Conserved hypothetical protein CHP00743 CH53_440 ea173508a4c603866c08fd3f2ef424ff 98 Gene3D G3DSA:3.30.70.860 27 98 3.2E-27 T 18-10-2018 IPR035571 UPF0234-like, C-terminal CH53_440 ea173508a4c603866c08fd3f2ef424ff 98 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 5 98 8.2E-40 T 18-10-2018 IPR005272 Conserved hypothetical protein CHP00743 CH53_2741 c5101d4161fa113bb1467ab5ae8e61bc 86 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 83 8.8E-28 T 18-10-2018 IPR009778 Modulator of Rho-dependent transcription termination CH53_2741 c5101d4161fa113bb1467ab5ae8e61bc 86 SUPERFAMILY SSF101744 1 84 6.28E-30 T 18-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 CH53_2741 c5101d4161fa113bb1467ab5ae8e61bc 86 Gene3D G3DSA:2.30.30.400 10 86 1.0E-31 T 18-10-2018 IPR038626 Rof-like superfamily CH53_4394 6f0dcc353e145f563bdf0ad3ee3f6d52 216 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 10 212 8.7E-22 T 18-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal CH53_4394 6f0dcc353e145f563bdf0ad3ee3f6d52 216 SUPERFAMILY SSF81296 10 215 2.24E-35 T 18-10-2018 IPR014756 Immunoglobulin E-set CH53_4394 6f0dcc353e145f563bdf0ad3ee3f6d52 216 Gene3D G3DSA:2.70.50.50 13 215 2.6E-62 T 18-10-2018 CH53_2539 139f240737f1126af283d30e0b50f19e 334 Gene3D G3DSA:2.60.40.1090 201 332 9.5E-6 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_2539 139f240737f1126af283d30e0b50f19e 334 SUPERFAMILY SSF49401 199 332 6.71E-13 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_2539 139f240737f1126af283d30e0b50f19e 334 Pfam PF00419 Fimbrial protein 194 333 7.4E-13 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_2539 139f240737f1126af283d30e0b50f19e 334 Gene3D G3DSA:2.60.40.3310 32 200 4.4E-7 T 18-10-2018 CH53_3101 6247316b31c52433d67e94092b4771e1 112 Pfam PF13982 YbfN-like lipoprotein 22 108 4.1E-47 T 18-10-2018 IPR025727 YbfN-like lipoprotein CH53_1062 7854d11a27b0ab7ecbe7817ad46befaa 155 Pfam PF12821 Threonine/Serine exporter, ThrE 11 145 3.3E-36 T 18-10-2018 IPR024528 Threonine/Serine exporter, ThrE CH53_1062 7854d11a27b0ab7ecbe7817ad46befaa 155 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 155 35.818 T 18-10-2018 IPR020914 Uncharacterised protein family UPF0442 CH53_3217 43a9213ab91d1db2a27f67e1f15b1f42 156 Pfam PF07308 Protein of unknown function (DUF1456) 86 153 3.0E-25 T 18-10-2018 IPR009921 Domain of unknown function DUF1456 CH53_3217 43a9213ab91d1db2a27f67e1f15b1f42 156 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 3.4E-27 T 18-10-2018 IPR009921 Domain of unknown function DUF1456 CH53_3646 0726b2e59ff8f851769e3d94f0e86f25 135 Pfam PF13554 Bacteriophage related domain of unknown function 6 130 8.3E-35 T 18-10-2018 IPR025395 Protein of unknown function DUF4128 CH53_3646 0726b2e59ff8f851769e3d94f0e86f25 135 Gene3D G3DSA:3.30.2000.20 1 135 1.0E-39 T 18-10-2018 CH53_1225 94fd71b1f1afd84c925220b2f4d6331a 465 Pfam PF03389 MobA/MobL family 18 197 2.7E-53 T 18-10-2018 IPR005053 MobA/MobL protein CH53_1225 94fd71b1f1afd84c925220b2f4d6331a 465 Gene3D G3DSA:3.30.930.30 2 191 6.9E-63 T 18-10-2018 CH53_2351 139eeee5ee1810b2f6a699660824d4e7 197 Pfam PF02525 Flavodoxin-like fold 3 188 2.2E-34 T 18-10-2018 IPR003680 Flavodoxin-like fold CH53_2351 139eeee5ee1810b2f6a699660824d4e7 197 Gene3D G3DSA:3.40.50.360 1 194 1.1E-62 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_2351 139eeee5ee1810b2f6a699660824d4e7 197 SUPERFAMILY SSF52218 1 193 2.0E-42 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_78 e4f61138d3550b433fcb29b356ee7b27 510 Gene3D G3DSA:1.50.10.140 26 164 2.5E-7 T 18-10-2018 CH53_78 e4f61138d3550b433fcb29b356ee7b27 510 Pfam PF11329 Protein of unknown function (DUF3131) 39 416 1.1E-144 T 18-10-2018 IPR021478 Protein of unknown function DUF3131 CH53_1640 5fcca524a2ebc4f3da18bca5d9f5c024 556 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 21 554 1.7E-228 T 18-10-2018 IPR017744 Cellulose biosynthesis protein BcsG CH53_1640 5fcca524a2ebc4f3da18bca5d9f5c024 556 Pfam PF11658 Cellulose biosynthesis protein BcsG 23 551 6.8E-234 T 18-10-2018 IPR017744 Cellulose biosynthesis protein BcsG CH53_3654 67d5bf5d6bde89d08ac1998064f098e1 108 Gene3D G3DSA:1.10.10.10 2 108 1.1E-37 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_3654 67d5bf5d6bde89d08ac1998064f098e1 108 Pfam PF01638 HxlR-like helix-turn-helix 20 105 2.9E-34 T 18-10-2018 IPR002577 Helix-turn-helix, HxlR type CH53_3654 67d5bf5d6bde89d08ac1998064f098e1 108 SUPERFAMILY SSF46785 6 106 1.08E-31 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CH53_56 06cc5f10abf4bd1ca2f1db14b8609a8a 100 Pfam PF00577 Outer membrane usher protein 13 90 1.3E-16 T 18-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 CH53_1945 82b6469ddd0052c59e26c582b55d8127 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 315 2.2E-43 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_702 76b85a2a0338b4ecd6a7d95db82d099e 141 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 37 141 1.0E-18 T 18-10-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CH53_3723 59947ab1125ae4688b68ffc77c821706 369 Pfam PF01699 Sodium/calcium exchanger protein 227 366 1.8E-7 T 18-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CH53_3723 59947ab1125ae4688b68ffc77c821706 369 Pfam PF01699 Sodium/calcium exchanger protein 42 192 1.1E-13 T 18-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CH53_3723 59947ab1125ae4688b68ffc77c821706 369 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 11 367 1.1E-103 T 18-10-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 CH53_4013 e086a084568be87ff6942c2376ef5519 337 Gene3D G3DSA:2.70.98.80 220 337 2.4E-7 T 18-10-2018 CH53_4013 e086a084568be87ff6942c2376ef5519 337 Gene3D G3DSA:2.70.98.80 9 189 2.7E-10 T 18-10-2018 CH53_4013 e086a084568be87ff6942c2376ef5519 337 Pfam PF14486 Domain of unknown function (DUF4432) 34 335 7.0E-16 T 18-10-2018 IPR027839 Protein of unknown function DUF4432 CH53_4013 e086a084568be87ff6942c2376ef5519 337 SUPERFAMILY SSF74650 38 334 3.45E-5 T 18-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CH53_3227 86db01084ae28adb20c281d0294bfb05 384 Gene3D G3DSA:1.10.3720.10 166 377 4.8E-31 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3227 86db01084ae28adb20c281d0294bfb05 384 SUPERFAMILY SSF161098 172 371 9.42E-35 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3227 86db01084ae28adb20c281d0294bfb05 384 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 373 7.0E-19 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_136 76807e245839b465c6b2bb34a851b156 182 Gene3D G3DSA:3.30.1380.10 61 182 1.5E-10 T 18-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CH53_136 76807e245839b465c6b2bb34a851b156 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 9.1E-61 T 18-10-2018 IPR010275 Protein of unknown function DUF882 CH53_136 76807e245839b465c6b2bb34a851b156 182 SUPERFAMILY SSF55166 66 182 1.07E-31 T 18-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CH53_2485 704e2662c411c2e58220b950bc0b9c1c 177 Pfam PF01292 Prokaryotic cytochrome b561 6 175 2.1E-22 T 18-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CH53_2485 704e2662c411c2e58220b950bc0b9c1c 177 SUPERFAMILY SSF81342 4 176 1.88E-26 T 18-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CH53_3922 fba3127302246d38c060b09e99364761 82 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 77 2.4E-26 T 18-10-2018 IPR018680 Protein of unknown function DUF2164 CH53_1995 c4a7b0f764702081f69441d603cf48f2 66 Pfam PF13627 Prokaryotic lipoprotein-attachment site 9 29 8.4E-9 T 18-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site CH53_4040 5bafa7fe4cc95d67db01108e7c573b8f 64 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 18 64 1.0E-19 T 18-10-2018 CH53_4040 5bafa7fe4cc95d67db01108e7c573b8f 64 Pfam PF13617 YnbE-like lipoprotein 10 62 1.5E-25 T 18-10-2018 IPR025985 YnbE-like lipoprotein CH53_4131 288fd9f6ca4fba4871f7055f6baa7e0f 554 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 11 239 4.6E-42 T 18-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 CH53_4131 288fd9f6ca4fba4871f7055f6baa7e0f 554 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 3 553 43.72 T 18-10-2018 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 CH53_3147 547eb54d28e7cffbff9879acdbe6cd3f 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 6.2E-172 T 18-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CH53_3147 547eb54d28e7cffbff9879acdbe6cd3f 522 PIRSF PIRSF006446 1 521 1.0E-139 T 18-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CH53_481 05f4e1505f11d3f834d4636161234d86 446 PIRSF PIRSF006060 3 443 5.4E-67 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CH53_481 05f4e1505f11d3f834d4636161234d86 446 Pfam PF00324 Amino acid permease 18 367 2.2E-36 T 18-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CH53_481 05f4e1505f11d3f834d4636161234d86 446 Gene3D G3DSA:1.20.1740.10 6 437 4.7E-77 T 18-10-2018 CH53_2952 b56e94456d9bce3891dd071541a6428a 162 Gene3D G3DSA:3.40.50.360 2 160 2.2E-45 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_2952 b56e94456d9bce3891dd071541a6428a 162 SUPERFAMILY SSF52218 13 157 1.2E-33 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_2952 b56e94456d9bce3891dd071541a6428a 162 Pfam PF03358 NADPH-dependent FMN reductase 14 75 1.2E-7 T 18-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CH53_3011 3845b9d80a3814234de72ec4f70c5fd9 441 Pfam PF10117 McrBC 5-methylcytosine restriction system component 55 384 4.8E-97 T 18-10-2018 IPR019292 5-methylcytosine restriction system component CH53_3249 6537d5a57d152ec1c852fc822e3841bd 231 Pfam PF12697 Alpha/beta hydrolase family 7 220 1.8E-15 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CH53_3249 6537d5a57d152ec1c852fc822e3841bd 231 SUPERFAMILY SSF53474 6 224 2.75E-28 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_3249 6537d5a57d152ec1c852fc822e3841bd 231 Gene3D G3DSA:3.40.50.1820 2 228 3.5E-39 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold CH53_3384 9d59f74402f51e1e9abd1f4bc6709191 245 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 32 238 5.9E-53 T 18-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 CH53_3384 9d59f74402f51e1e9abd1f4bc6709191 245 Gene3D G3DSA:1.10.1760.20 31 241 1.8E-52 T 18-10-2018 CH53_3384 9d59f74402f51e1e9abd1f4bc6709191 245 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 31 243 27.821 T 18-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 CH53_3384 9d59f74402f51e1e9abd1f4bc6709191 245 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 31 240 2.5E-109 T 18-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 CH53_4061 b7730141b689c2c78e4eed92c1e5aa33 221 Pfam PF04012 PspA/IM30 family 2 216 1.5E-44 T 18-10-2018 IPR007157 PspA/IM30 CH53_4061 b7730141b689c2c78e4eed92c1e5aa33 221 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 1.0E-94 T 18-10-2018 IPR014319 Phage shock protein, PspA CH53_1745 830362ce3db11f4417709cc6541e4b95 164 SUPERFAMILY SSF143744 26 158 4.97E-33 T 18-10-2018 IPR038084 GlcG-like domain superfamily CH53_1745 830362ce3db11f4417709cc6541e4b95 164 Pfam PF03928 Haem-degrading 31 156 4.4E-26 T 18-10-2018 IPR005624 Haem-degrading CH53_1745 830362ce3db11f4417709cc6541e4b95 164 Gene3D G3DSA:3.30.450.150 32 160 3.2E-36 T 18-10-2018 IPR038084 GlcG-like domain superfamily CH53_2207 dfc41d0827a7a0dd321377fb366f7e5d 481 SUPERFAMILY SSF111283 18 480 1.57E-131 T 18-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 CH53_2207 dfc41d0827a7a0dd321377fb366f7e5d 481 PIRSF PIRSF004919 14 481 6.5E-148 T 18-10-2018 IPR025502 TldD CH53_2207 dfc41d0827a7a0dd321377fb366f7e5d 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 2.3E-68 T 18-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CH53_2207 dfc41d0827a7a0dd321377fb366f7e5d 481 Gene3D G3DSA:3.30.2290.10 11 240 2.5E-18 T 18-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal CH53_2898 2ff6f7fc1d44f15c2a24ea5850679b91 151 Pfam PF00583 Acetyltransferase (GNAT) family 39 130 2.0E-11 T 18-10-2018 IPR000182 GNAT domain CH53_2898 2ff6f7fc1d44f15c2a24ea5850679b91 151 Gene3D G3DSA:3.40.630.30 7 138 3.4E-17 T 18-10-2018 CH53_2898 2ff6f7fc1d44f15c2a24ea5850679b91 151 SUPERFAMILY SSF55729 30 151 1.66E-19 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_190 1ba9b2f345157d9b67fb0100b998da1c 191 Pfam PF12883 Protein of unknown function (DUF3828) 41 174 8.7E-13 T 18-10-2018 IPR024289 Domain of unknown function DUF3828 CH53_3498 aa0223ca54b072aa11777b5db3f3e169 117 Pfam PF06412 Conjugal transfer protein TraD 52 109 2.8E-13 T 18-10-2018 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 CH53_1417 9a6c5b75c9adbfa6bee1c9879b5b4b9f 197 Pfam PF13327 Type III secretion system subunit 10 171 2.9E-59 T 18-10-2018 IPR025292 Type III secretion system protein CH53_742 50feb8ae1336282add1e5b9e37a1eb03 112 Pfam PF04899 MbeD/MobD like 3 61 2.0E-8 T 18-10-2018 IPR006983 MbeD/MobD-like CH53_4167 f61c5e8a77dfb8d44aa971294df59f35 135 Gene3D G3DSA:3.30.2000.20 1 135 1.1E-39 T 18-10-2018 CH53_4167 f61c5e8a77dfb8d44aa971294df59f35 135 Pfam PF13554 Bacteriophage related domain of unknown function 6 130 7.0E-35 T 18-10-2018 IPR025395 Protein of unknown function DUF4128 CH53_3638 90df719f8cb562b63540098b27a4e169 310 Gene3D G3DSA:1.10.1070.20 136 309 1.3E-23 T 18-10-2018 CH53_445 29ec86688f3e45f1fea6fe30688934f8 188 SUPERFAMILY SSF52833 51 184 1.25E-38 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_445 29ec86688f3e45f1fea6fe30688934f8 188 Gene3D G3DSA:3.40.30.10 26 186 2.3E-43 T 18-10-2018 CH53_445 29ec86688f3e45f1fea6fe30688934f8 188 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 11 183 3.2E-74 T 18-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 CH53_445 29ec86688f3e45f1fea6fe30688934f8 188 ProSitePatterns PS00194 Thioredoxin family active site. 77 95 - T 18-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CH53_445 29ec86688f3e45f1fea6fe30688934f8 188 Pfam PF08534 Redoxin 47 169 3.0E-23 T 18-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CH53_2426 a96807757ca33bb92b00126500ddcf83 518 Pfam PF03806 AbgT putative transporter family 14 514 3.8E-160 T 18-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 CH53_2882 ac8f4d83c6f155e6443d9b543a430287 122 Pfam PF10757 Biofilm formation regulator YbaJ 1 118 1.3E-65 T 18-10-2018 IPR019693 Biofilm formation regulator YbaJ CH53_3884 4df61ad1f9858dfe9d0118afe952c953 88 Pfam PF13453 Transcription factor zinc-finger 2 42 5.4E-21 T 18-10-2018 IPR027392 Transcription factor zinc-finger CH53_3916 95836135ac0b19b478538ab1b55a792d 99 SUPERFAMILY SSF47598 1 59 1.87E-8 T 18-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 CH53_3916 95836135ac0b19b478538ab1b55a792d 99 Gene3D G3DSA:1.10.1220.10 1 46 2.5E-7 T 18-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CH53_725 d0487f54544fe0245850f8b561e8dacd 321 Pfam PF01774 UreD urease accessory protein 88 295 7.7E-43 T 18-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 CH53_725 d0487f54544fe0245850f8b561e8dacd 321 Hamap MF_01384 Urease accessory protein UreD [ureD]. 44 306 23.253 T 18-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 CH53_2240 b71e448beea22f74398035ca09912e01 436 Pfam PF07690 Major Facilitator Superfamily 33 395 4.7E-47 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_2240 b71e448beea22f74398035ca09912e01 436 SUPERFAMILY SSF103473 19 435 4.19E-85 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_2240 b71e448beea22f74398035ca09912e01 436 Gene3D G3DSA:1.20.1250.20 12 434 1.6E-85 T 18-10-2018 CH53_2974 64d2cc3ba280eb3738514d0ecdc2ad73 132 ProDom PD034160 PRECURSOR SIGNAL YFJT INTERGENIC-REGION C0283 YKFB 1 127 2.0E-38 T 18-10-2018 CH53_1200 7381cdc1ccb94dae0c174473a533b1ef 331 Pfam PF00419 Fimbrial protein 208 331 6.2E-6 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_1200 7381cdc1ccb94dae0c174473a533b1ef 331 SUPERFAMILY SSF49401 209 331 1.99E-6 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_2146 64dceb8696a5a521a077925acb00920d 302 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 74 205 1.9E-53 T 18-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 CH53_3114 30df7862decdb66667bcb88e633a6bb2 103 Pfam PF15572 Immunity protein 45 3 93 6.2E-30 T 18-10-2018 IPR029077 Immunity protein 45 CH53_3420 b5f3cc4b0e749c6a60e4f6419225b013 88 Gene3D G3DSA:2.60.200.60 4 47 1.0E-6 T 18-10-2018 CH53_3420 b5f3cc4b0e749c6a60e4f6419225b013 88 Pfam PF05488 PAAR motif 8 79 2.5E-21 T 18-10-2018 IPR008727 PAAR motif CH53_3575 98f671f2ad8506006f7c8ccf5aed57ba 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 21 103 4.9E-27 T 18-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CH53_3575 98f671f2ad8506006f7c8ccf5aed57ba 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 103 17.887 T 18-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CH53_3575 98f671f2ad8506006f7c8ccf5aed57ba 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 3 102 1.8E-27 T 18-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CH53_3575 98f671f2ad8506006f7c8ccf5aed57ba 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 7.6E-18 T 18-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CH53_3575 98f671f2ad8506006f7c8ccf5aed57ba 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 7.6E-18 T 18-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CH53_3575 98f671f2ad8506006f7c8ccf5aed57ba 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 7.6E-18 T 18-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CH53_433 d19b813bbc7f4ac6d5359b9b542e9885 281 Pfam PF03411 Penicillin-insensitive murein endopeptidase 42 275 2.0E-95 T 18-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CH53_433 d19b813bbc7f4ac6d5359b9b542e9885 281 PIRSF PIRSF018455 1 281 9.2E-119 T 18-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CH53_433 d19b813bbc7f4ac6d5359b9b542e9885 281 SUPERFAMILY SSF55166 27 277 2.12E-99 T 18-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CH53_433 d19b813bbc7f4ac6d5359b9b542e9885 281 Gene3D G3DSA:3.30.1380.10 26 279 4.8E-100 T 18-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CH53_2813 a2342d5abc4e3df56d950d45a7f54f04 89 Pfam PF07338 Protein of unknown function (DUF1471) 33 88 9.8E-18 T 18-10-2018 IPR010854 Domain of unknown function DUF1471 CH53_2813 a2342d5abc4e3df56d950d45a7f54f04 89 Gene3D G3DSA:3.30.1660.10 20 89 3.4E-20 T 18-10-2018 IPR025543 Dodecin-like CH53_2813 a2342d5abc4e3df56d950d45a7f54f04 89 SUPERFAMILY SSF159871 2 89 2.75E-23 T 18-10-2018 IPR036275 YdgH-like superfamily CH53_4397 a57a29f104b6167b1043788f8ca85233 413 Pfam PF04932 O-Antigen ligase 195 342 1.5E-13 T 18-10-2018 IPR007016 O-antigen ligase-related CH53_2058 11963337b358a8dba74d4b90667f41da 506 Pfam PF02646 RmuC family 171 467 4.0E-105 T 18-10-2018 IPR003798 DNA recombination RmuC CH53_1551 0b3a0d945d0aed6546d0b948609cc741 708 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 11 697 0.0 T 18-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 CH53_1551 0b3a0d945d0aed6546d0b948609cc741 708 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 703 0.0 T 18-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 CH53_2858 f05b6596b0a335a76ea6dbde3da00c9f 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 7.4E-54 T 18-10-2018 IPR005619 Uncharacterised protein family, YajG CH53_2858 f05b6596b0a335a76ea6dbde3da00c9f 192 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 1 20 4.3E-5 T 18-10-2018 IPR012640 Membrane lipoprotein, lipid attachment site CH53_2581 1c2c8dc4142d74c36ab07b8fd457449b 246 Pfam PF11101 Protein of unknown function (DUF2884) 29 245 2.3E-48 T 18-10-2018 IPR021307 Protein of unknown function DUF2884 CH53_3335 9820f5044fa6ead04f90a98ab7ac1be0 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 322 1.6E-37 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_1179 6eb677da009e15904518bef19b796b44 435 Gene3D G3DSA:1.10.4160.10 10 434 2.6E-47 T 18-10-2018 IPR038271 Purine-cytosine permease superfamily CH53_1179 6eb677da009e15904518bef19b796b44 435 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 12 398 7.8E-22 T 18-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 CH53_2632 2bb4bae965721a1f4c84e43c07f8927a 468 Pfam PF06123 Inner membrane protein CreD 6 428 2.0E-151 T 18-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD CH53_2632 2bb4bae965721a1f4c84e43c07f8927a 468 PIRSF PIRSF004548 1 450 2.0E-182 T 18-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD CH53_2650 f33a2102fa082d7a4c77ece4b901f1b9 101 Gene3D G3DSA:1.10.1660.10 1 100 1.2E-27 T 18-10-2018 CH53_2650 f33a2102fa082d7a4c77ece4b901f1b9 101 Pfam PF13591 MerR HTH family regulatory protein 9 92 8.2E-24 T 18-10-2018 CH53_1403 0cc93b6b1c8732b118c98e86ac844cd2 79 Pfam PF06568 Domain of unknown function (DUF1127) 40 69 6.2E-12 T 18-10-2018 IPR009506 Protein of unknown function DUF1127 CH53_4077 df11e47ce409d3bd20da2589999a18fb 202 Gene3D G3DSA:1.20.1050.10 82 188 8.9E-78 T 18-10-2018 CH53_4077 df11e47ce409d3bd20da2589999a18fb 202 SUPERFAMILY SSF52833 1 79 3.16E-19 T 18-10-2018 IPR036249 Thioredoxin-like superfamily CH53_4077 df11e47ce409d3bd20da2589999a18fb 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 101 189 4.2E-16 T 18-10-2018 IPR004046 Glutathione S-transferase, C-terminal CH53_4077 df11e47ce409d3bd20da2589999a18fb 202 SUPERFAMILY SSF47616 84 199 6.4E-28 T 18-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CH53_4077 df11e47ce409d3bd20da2589999a18fb 202 Gene3D G3DSA:3.40.30.10 3 193 8.9E-78 T 18-10-2018 CH53_4077 df11e47ce409d3bd20da2589999a18fb 202 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 6.1E-12 T 18-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CH53_614 d196ac978b6b1452b33dcdf0cdf4f948 173 SUPERFAMILY SSF89872 46 173 1.7E-43 T 18-10-2018 IPR036501 Inhibitor of vertebrate lysozyme superfamily CH53_614 d196ac978b6b1452b33dcdf0cdf4f948 173 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 53 171 1.1E-46 T 18-10-2018 CH53_614 d196ac978b6b1452b33dcdf0cdf4f948 173 PIRSF PIRSF009103 15 173 3.1E-53 T 18-10-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 CH53_614 d196ac978b6b1452b33dcdf0cdf4f948 173 Gene3D G3DSA:3.40.1420.10 43 173 2.4E-42 T 18-10-2018 IPR036501 Inhibitor of vertebrate lysozyme superfamily CH53_3637 9f89c55edb3dd2e7eec8a779535c4919 140 SUPERFAMILY SSF88659 67 102 8.22E-5 T 18-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CH53_3637 9f89c55edb3dd2e7eec8a779535c4919 140 Pfam PF06530 Phage antitermination protein Q 2 124 2.4E-42 T 18-10-2018 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 CH53_263 81c87f2714cfa9974165ed8e548d66ac 115 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 115 3.0E-52 T 18-10-2018 IPR020489 Uncharacterised protein family YejG CH53_263 81c87f2714cfa9974165ed8e548d66ac 115 Pfam PF13989 YejG-like protein 4 109 3.1E-50 T 18-10-2018 IPR020489 Uncharacterised protein family YejG CH53_4267 c0a066dbf06a2173eb5b6d6491f0a153 232 Gene3D G3DSA:2.40.160.40 21 232 7.1E-76 T 18-10-2018 CH53_4267 c0a066dbf06a2173eb5b6d6491f0a153 232 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 15 232 5.3E-77 T 18-10-2018 IPR009331 Oligogalacturonate-specific porin CH53_4267 c0a066dbf06a2173eb5b6d6491f0a153 232 SUPERFAMILY SSF56935 50 232 2.69E-13 T 18-10-2018 CH53_203 68a66cc883a636a19a7843082d687789 321 Gene3D G3DSA:1.10.3720.10 33 316 2.6E-55 T 18-10-2018 IPR035906 MetI-like superfamily CH53_203 68a66cc883a636a19a7843082d687789 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 316 1.3E-23 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_203 68a66cc883a636a19a7843082d687789 321 SUPERFAMILY SSF161098 32 312 3.46E-57 T 18-10-2018 IPR035906 MetI-like superfamily CH53_4178 67b390e4fd998d2449bc5527c24bc963 149 Pfam PF10045 Uncharacterized conserved protein (DUF2280) 1 102 2.8E-46 T 18-10-2018 IPR018738 Protein of unknown function DUF2280 CH53_2438 f2d141617dcdc42195ae1227dfbaeb59 407 SUPERFAMILY SSF103473 20 395 2.35E-29 T 18-10-2018 IPR036259 MFS transporter superfamily CH53_2438 f2d141617dcdc42195ae1227dfbaeb59 407 Pfam PF07690 Major Facilitator Superfamily 22 359 1.3E-18 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CH53_2438 f2d141617dcdc42195ae1227dfbaeb59 407 Gene3D G3DSA:1.20.1250.20 16 391 1.2E-25 T 18-10-2018 CH53_3461 747ee8611b8446b5c255e69ed45eaccd 355 Gene3D G3DSA:3.20.20.80 27 341 1.4E-29 T 18-10-2018 CH53_3461 747ee8611b8446b5c255e69ed45eaccd 355 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 31 339 1.9E-11 T 18-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 CH53_3461 747ee8611b8446b5c255e69ed45eaccd 355 SUPERFAMILY SSF51445 6 334 1.36E-53 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily CH53_4186 892007ea6a8fca932da6daae6b77e1ba 104 Pfam PF16083 LydA holin phage, holin superfamily III 16 90 2.1E-13 T 18-10-2018 IPR032126 LydA-like holin CH53_3120 38d79f858719fae192af59c005b33314 142 Pfam PF00892 EamA-like transporter family 4 140 1.7E-21 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_3120 38d79f858719fae192af59c005b33314 142 SUPERFAMILY SSF103481 40 141 9.02E-16 T 18-10-2018 CH53_4044 5714ef042db2a5d5cba27388f33e3091 219 Pfam PF02308 MgtC family 9 138 1.1E-40 T 18-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CH53_4044 5714ef042db2a5d5cba27388f33e3091 219 PRINTS PR01837 MgtC/SapB protein signature 12 31 4.3E-48 T 18-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CH53_4044 5714ef042db2a5d5cba27388f33e3091 219 PRINTS PR01837 MgtC/SapB protein signature 65 87 4.3E-48 T 18-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CH53_4044 5714ef042db2a5d5cba27388f33e3091 219 PRINTS PR01837 MgtC/SapB protein signature 92 116 4.3E-48 T 18-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CH53_4044 5714ef042db2a5d5cba27388f33e3091 219 PRINTS PR01837 MgtC/SapB protein signature 31 49 4.3E-48 T 18-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CH53_1496 9732015d27154822786b991a8b23afa5 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 7.0E-29 T 18-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CH53_1496 9732015d27154822786b991a8b23afa5 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 28.081 T 18-10-2018 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 CH53_1496 9732015d27154822786b991a8b23afa5 95 Gene3D G3DSA:3.40.1260.10 1 95 9.5E-29 T 18-10-2018 IPR027396 DsrEFH-like CH53_1496 9732015d27154822786b991a8b23afa5 95 Pfam PF04077 DsrH like protein 7 92 3.2E-27 T 18-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CH53_1496 9732015d27154822786b991a8b23afa5 95 SUPERFAMILY SSF75169 1 95 1.91E-28 T 18-10-2018 IPR027396 DsrEFH-like CH53_2981 b8b1cbfa1fc1a531886e0e519fe66829 283 Pfam PF13708 Domain of unknown function (DUF4942) 91 278 2.7E-60 T 18-10-2018 IPR031339 Domain of unknown function DUF4942 CH53_3216 b1ef00474836c192bfbe8fd277cd71b2 301 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 31 282 1.0E-75 T 18-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 CH53_3216 b1ef00474836c192bfbe8fd277cd71b2 301 Gene3D G3DSA:1.10.3720.10 79 282 2.0E-24 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3216 b1ef00474836c192bfbe8fd277cd71b2 301 SUPERFAMILY SSF161098 84 273 1.57E-26 T 18-10-2018 IPR035906 MetI-like superfamily CH53_2055 7ff7bb20fe6aedc1db71ce5b1fd7ab96 265 SUPERFAMILY SSF52799 12 264 5.65E-48 T 18-10-2018 IPR029021 Protein-tyrosine phosphatase-like CH53_2055 7ff7bb20fe6aedc1db71ce5b1fd7ab96 265 Pfam PF13350 Tyrosine phosphatase family 12 265 7.9E-59 T 18-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type CH53_2055 7ff7bb20fe6aedc1db71ce5b1fd7ab96 265 Gene3D G3DSA:3.90.190.10 13 264 1.6E-54 T 18-10-2018 IPR029021 Protein-tyrosine phosphatase-like CH53_1884 3bfd55296a4b330fdd1250c6e672f5f8 110 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 101 9.6E-25 T 18-10-2018 IPR009241 Toxin HigB-like CH53_4153 34251fe0a882620ccf4b8368ca4ceab6 197 Pfam PF06805 Bacteriophage lambda tail assembly protein I 1 85 5.2E-8 T 18-10-2018 IPR010654 Bacteriophage lambda tail assembly I CH53_2895 717fded08281a583853dd883326dc7f2 178 Pfam PF07445 Primosomal replication protein priC 9 175 5.6E-54 T 18-10-2018 IPR010890 Primosomal replication PriB/PriC CH53_2895 717fded08281a583853dd883326dc7f2 178 Gene3D G3DSA:1.20.1270.340 1 98 5.0E-34 T 18-10-2018 IPR038338 PriB/PriC superfamily CH53_2768 fdeca3efe9aab23e878d18e72c6e60d4 257 Pfam PF03591 AzlC protein 27 167 7.6E-38 T 18-10-2018 IPR011606 Branched-chain amino acid transport, permease CH53_2660 2a8e69a1a0542ba1c80e056bbd6f2f2a 110 Pfam PF02501 Type II secretion system (T2SS), protein I 28 105 1.8E-14 T 18-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 CH53_2660 2a8e69a1a0542ba1c80e056bbd6f2f2a 110 Gene3D G3DSA:3.30.1300.30 21 107 1.9E-13 T 18-10-2018 CH53_2660 2a8e69a1a0542ba1c80e056bbd6f2f2a 110 SUPERFAMILY SSF54523 27 106 3.22E-20 T 18-10-2018 CH53_2056 d15b4a675921fe493bcbdbb8a3168132 603 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 417 538 3.1E-27 T 18-10-2018 IPR025299 CstA, C-terminal domain CH53_2056 d15b4a675921fe493bcbdbb8a3168132 603 Pfam PF02554 Carbon starvation protein CstA 4 368 5.3E-138 T 18-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CH53_1144 54727c9955391c4f213d6623ad880a38 466 Gene3D G3DSA:3.40.50.2000 246 436 1.2E-14 T 18-10-2018 CH53_1144 54727c9955391c4f213d6623ad880a38 466 SUPERFAMILY SSF53756 130 450 3.39E-15 T 18-10-2018 CH53_4177 e2b1ecbb46b6d7eae5c9915bb05be075 495 Gene3D G3DSA:3.40.50.300 3 202 1.1E-39 T 18-10-2018 CH53_2979 46b2129b34e607ad8ba50d4c721677df 121 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 12 100 1.3E-31 T 18-10-2018 IPR009610 CbtA toxin of type IV toxin-antitoxin system CH53_2218 964d114673fc91c70a89e50a8b3503c8 136 Gene3D G3DSA:1.10.286.20 1 44 1.8E-25 T 18-10-2018 CH53_2218 964d114673fc91c70a89e50a8b3503c8 136 SUPERFAMILY SSF54534 49 126 1.7E-17 T 18-10-2018 CH53_2218 964d114673fc91c70a89e50a8b3503c8 136 PIRSF PIRSF006092 27 128 9.6E-23 T 18-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CH53_2218 964d114673fc91c70a89e50a8b3503c8 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.542 T 18-10-2018 IPR028625 Regulator of nucleoside diphosphate kinase GO:0070063 CH53_2218 964d114673fc91c70a89e50a8b3503c8 136 Pfam PF14760 Rnk N-terminus 4 43 4.7E-13 T 18-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CH53_2218 964d114673fc91c70a89e50a8b3503c8 136 Gene3D G3DSA:3.10.50.30 46 136 2.4E-30 T 18-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 CH53_2218 964d114673fc91c70a89e50a8b3503c8 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 3.4E-17 T 18-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CH53_1170 d9e1997e8ec1f65405494e11921c10ea 505 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 6.7E-146 T 18-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane CH53_4316 1b7367310142a14b23da8785097ed391 654 Pfam PF01757 Acyltransferase family 17 329 8.6E-27 T 18-10-2018 IPR002656 Acyltransferase 3 GO:0016747 CH53_4173 e3ca44eb36a11d2d656c43bd498adc4b 382 Pfam PF11651 P22 coat protein - gene protein 5 110 269 7.0E-16 T 18-10-2018 IPR024659 Major capsid protein Gp5 CH53_2653 8fb571e5ca2fe235ec1bbc97e083f8f2 251 SUPERFAMILY SSF53056 42 250 1.15E-52 T 18-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CH53_2653 8fb571e5ca2fe235ec1bbc97e083f8f2 251 Pfam PF00484 Carbonic anhydrase 99 246 1.3E-34 T 18-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CH53_2653 8fb571e5ca2fe235ec1bbc97e083f8f2 251 Gene3D G3DSA:3.40.1050.10 47 251 6.0E-55 T 18-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CH53_2653 8fb571e5ca2fe235ec1bbc97e083f8f2 251 SMART SM00947 91 251 1.7E-42 T 18-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CH53_2592 3514ec124dd98d51cb1b8242bc694284 168 Gene3D G3DSA:3.40.1740.10 1 168 8.5E-55 T 18-10-2018 CH53_2592 3514ec124dd98d51cb1b8242bc694284 168 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 168 30.508 T 18-10-2018 IPR003774 Protein of unknown function UPF0301 CH53_2592 3514ec124dd98d51cb1b8242bc694284 168 SUPERFAMILY SSF143456 2 168 5.76E-56 T 18-10-2018 CH53_2592 3514ec124dd98d51cb1b8242bc694284 168 Pfam PF02622 Uncharacterized ACR, COG1678 2 155 2.7E-45 T 18-10-2018 IPR003774 Protein of unknown function UPF0301 CH53_1830 5b56628b32816e601b464721bf3eaec4 205 Pfam PF03458 UPF0126 domain 91 164 2.4E-20 T 18-10-2018 IPR005115 Uncharacterised domain UPF0126 CH53_1830 5b56628b32816e601b464721bf3eaec4 205 Pfam PF03458 UPF0126 domain 5 78 2.3E-19 T 18-10-2018 IPR005115 Uncharacterised domain UPF0126 CH53_699 b35914e28b5e78542d31493abbf56303 94 SUPERFAMILY SSF54285 4 77 2.29E-26 T 18-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CH53_699 b35914e28b5e78542d31493abbf56303 94 Pfam PF03658 RnfH family Ubiquitin 4 86 1.2E-34 T 18-10-2018 IPR005346 RnfH protein CH53_699 b35914e28b5e78542d31493abbf56303 94 Gene3D G3DSA:3.10.20.280 1 88 1.2E-34 T 18-10-2018 IPR037021 RnfH superfamily CH53_699 b35914e28b5e78542d31493abbf56303 94 Hamap MF_00460 Protein RnfH [rnfH]. 4 94 26.293 T 18-10-2018 IPR005346 RnfH protein CH53_3291 f0b3452c40257d92f925d7dd39b62aff 249 Pfam PF02698 DUF218 domain 48 170 1.9E-17 T 18-10-2018 IPR003848 Domain of unknown function DUF218 CH53_3291 f0b3452c40257d92f925d7dd39b62aff 249 PIRSF PIRSF005011 1 247 1.6E-151 T 18-10-2018 IPR023604 Uncharacterised protein family SanA CH53_351 e5f5e33efd9c1645e6e6b201a1c3d0f2 180 SUPERFAMILY SSF56925 45 180 1.65E-11 T 18-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CH53_351 e5f5e33efd9c1645e6e6b201a1c3d0f2 180 Pfam PF07437 YfaZ precursor 1 180 1.0E-85 T 18-10-2018 IPR009998 YfaZ CH53_493 5885d6d5c36654e21be3024bc04f105c 258 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 252 2.3E-28 T 18-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 CH53_235 42faf7abde11433a31010e062220b175 140 Pfam PF00293 NUDIX domain 5 126 1.9E-27 T 18-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CH53_235 42faf7abde11433a31010e062220b175 140 SUPERFAMILY SSF55811 4 133 4.74E-34 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CH53_235 42faf7abde11433a31010e062220b175 140 Gene3D G3DSA:3.90.79.10 1 132 4.4E-38 T 18-10-2018 CH53_235 42faf7abde11433a31010e062220b175 140 PRINTS PR00502 NUDIX hydrolase family signature 45 60 5.1E-9 T 18-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CH53_235 42faf7abde11433a31010e062220b175 140 PRINTS PR00502 NUDIX hydrolase family signature 31 45 5.1E-9 T 18-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CH53_235 42faf7abde11433a31010e062220b175 140 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 18-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CH53_1235 ac2198f26652bcae61686ca9d098efe5 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 354 9.3E-75 T 18-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CH53_1235 ac2198f26652bcae61686ca9d098efe5 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 7.6E-142 T 18-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 CH53_4398 cc7611d6f1c198678d9c595b3b7ca0ea 286 Pfam PF00535 Glycosyl transferase family 2 36 163 1.9E-9 T 18-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CH53_4398 cc7611d6f1c198678d9c595b3b7ca0ea 286 Gene3D G3DSA:3.90.550.10 32 213 1.1E-12 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_4398 cc7611d6f1c198678d9c595b3b7ca0ea 286 SUPERFAMILY SSF53448 47 208 2.7E-16 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CH53_4355 50dbfd8aee6f84de4f7141daeac39c78 282 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 11 280 1.7E-111 T 18-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CH53_4355 50dbfd8aee6f84de4f7141daeac39c78 282 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 10 280 2.5E-142 T 18-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CH53_2458 a2246036b0b26c97e35d4115d804d696 172 Pfam PF02371 Transposase IS116/IS110/IS902 family 35 119 1.4E-16 T 18-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CH53_324 15c7390c9d8f7411415dfb34c4e786db 120 Pfam PF07784 Protein of unknown function (DUF1622) 47 106 2.4E-22 T 18-10-2018 IPR012427 Protein of unknown function DUF1622 CH53_2423 0dc7919abc8ad65d2c328e2bca8ab73b 186 Gene3D G3DSA:2.60.40.3700 25 185 1.6E-63 T 18-10-2018 CH53_1114 d51b675a9fdec994fe5003d15e406df4 451 Pfam PF07804 HipA-like C-terminal domain 206 416 1.4E-18 T 18-10-2018 IPR012893 HipA-like, C-terminal CH53_2024 d98c79194ae716e3bc06a13665a5ae0a 106 PIRSF PIRSF028538 1 106 7.9E-44 T 18-10-2018 IPR014949 Protein of unknown function DUF1820 CH53_2024 d98c79194ae716e3bc06a13665a5ae0a 106 Pfam PF08850 Domain of unknown function (DUF1820) 7 99 1.6E-40 T 18-10-2018 IPR014949 Protein of unknown function DUF1820 CH53_3984 d9729122be5ee5ee6f606624865d62e8 120 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 120 2.0E-48 T 18-10-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 CH53_3984 d9729122be5ee5ee6f606624865d62e8 120 Gene3D G3DSA:3.40.30.10 1 110 5.3E-46 T 18-10-2018 CH53_2560 794fb259340aac09b8100113568407ed 232 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 54 152 2.2E-6 T 18-10-2018 IPR002654 Glycosyl transferase, family 25 CH53_1380 d6ae621549e22bd3f612eab60d998f88 191 SUPERFAMILY SSF46689 3 64 1.03E-9 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CH53_1380 d6ae621549e22bd3f612eab60d998f88 191 Gene3D G3DSA:1.10.357.10 1 184 7.7E-26 T 18-10-2018 CH53_1380 d6ae621549e22bd3f612eab60d998f88 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 49 4.4E-6 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CH53_3126 e883e9e97d75676fea044ed7e30da065 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 64 3.7E-38 T 18-10-2018 IPR019663 Uncharacterised protein YbfA CH53_1501 37f991655781fd88689f1b51eb6e4c5d 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 16.829 T 18-10-2018 IPR007236 SlyX CH53_1501 37f991655781fd88689f1b51eb6e4c5d 72 Pfam PF04102 SlyX 7 72 2.1E-24 T 18-10-2018 IPR007236 SlyX CH53_323 2e6efa01ad5e218c35e9677fe12e26bf 98 SUPERFAMILY SSF159871 8 98 4.45E-5 T 18-10-2018 IPR036275 YdgH-like superfamily CH53_2516 d0f723d2e4b30c2f687633ee3edc96a4 415 Pfam PF04346 Ethanolamine utilisation protein, EutH 3 396 1.0E-137 T 18-10-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 CH53_2516 d0f723d2e4b30c2f687633ee3edc96a4 415 PIRSF PIRSF019466 1 411 3.1E-128 T 18-10-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 CH53_3309 71a5c56213c25e9d0a0f3be5c39afe16 265 Pfam PF01061 ABC-2 type transporter 20 222 1.1E-21 T 18-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CH53_4119 68d2aee7c1a9001aa3921499e8395315 367 Pfam PF01594 AI-2E family transporter 17 346 1.2E-49 T 18-10-2018 IPR002549 Transmembrane protein TqsA-like CH53_2019 763cf974a2eab1955e1cc20bcb83b251 174 Pfam PF08786 DcrB 41 170 1.9E-27 T 18-10-2018 IPR014894 Protein DcrB CH53_2019 763cf974a2eab1955e1cc20bcb83b251 174 Gene3D G3DSA:3.40.1000.10 37 174 4.6E-8 T 18-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich CH53_3135 d021147626398cd8cf907de57cc1a9c5 339 Pfam PF06166 Protein of unknown function (DUF979) 6 338 5.2E-131 T 18-10-2018 IPR009323 Protein of unknown function DUF979 CH53_734 070328f9faf45b7780fe19bc9681a3c8 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 261 5.5E-21 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CH53_734 070328f9faf45b7780fe19bc9681a3c8 268 SUPERFAMILY SSF161098 65 256 3.79E-24 T 18-10-2018 IPR035906 MetI-like superfamily CH53_734 070328f9faf45b7780fe19bc9681a3c8 268 Gene3D G3DSA:1.10.3720.10 61 262 4.7E-20 T 18-10-2018 IPR035906 MetI-like superfamily CH53_3603 e478615b7e0ef4041f5de63d1476398c 199 Pfam PF03358 NADPH-dependent FMN reductase 13 142 9.8E-13 T 18-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CH53_3603 e478615b7e0ef4041f5de63d1476398c 199 SUPERFAMILY SSF52218 1 197 2.1E-61 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_3603 e478615b7e0ef4041f5de63d1476398c 199 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 199 45.768 T 18-10-2018 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CH53_3603 e478615b7e0ef4041f5de63d1476398c 199 Gene3D G3DSA:3.40.50.360 1 198 6.5E-77 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_3603 e478615b7e0ef4041f5de63d1476398c 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 197 1.0E-99 T 18-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CH53_4212 c668b82a603922996593a6aaae83cea8 237 Pfam PF04098 Rad52/22 family double-strand break repair protein 4 134 1.1E-16 T 18-10-2018 IPR007232 DNA repair protein Rad52/59/22 GO:0006281|GO:0006310 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938 CH53_2929 10ffc7723b9c7555ce0f9fce0eaaa5a9 810 Pfam PF02687 FtsX-like permease family 714 794 2.5E-7 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CH53_2544 bd04770146174f9ddb456ddf8c705809 182 SUPERFAMILY SSF49401 27 182 1.59E-25 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_2544 bd04770146174f9ddb456ddf8c705809 182 Pfam PF16970 Type-1 fimbrial protein, A 52 181 2.4E-8 T 18-10-2018 IPR039458 Type-1 fimbrial protein, A CH53_2544 bd04770146174f9ddb456ddf8c705809 182 Gene3D G3DSA:2.60.40.1090 24 182 9.6E-29 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_127 884e0487b79cdbe8e772794f81cee02c 183 Pfam PF07126 Cell-division protein ZapC 3 168 4.0E-69 T 18-10-2018 IPR009809 Cell division protein ZapC CH53_127 884e0487b79cdbe8e772794f81cee02c 183 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 176 40.487 T 18-10-2018 IPR009809 Cell division protein ZapC CH53_127 884e0487b79cdbe8e772794f81cee02c 183 PIRSF PIRSF010252 1 178 2.5E-62 T 18-10-2018 IPR009809 Cell division protein ZapC CH53_3085 2b2e6ffffedcd179ad21fc52ea6afcd9 108 PIRSF PIRSF039032 1 107 1.8E-39 T 18-10-2018 IPR009387 Toxin HigB-2 CH53_1835 829bcecacd391a90d26b3a6618639769 79 Pfam PF14110 Domain of unknown function (DUF4282) 6 76 3.2E-7 T 18-10-2018 IPR025557 Protein of unknown function DUF4282 CH53_1699 a1d4a8510583d31470b11fc198cbdc3f 484 Gene3D G3DSA:3.40.630.30 357 484 3.6E-5 T 18-10-2018 CH53_1634 3a521b11c08c3787227c836540e407c0 760 Gene3D G3DSA:2.60.120.260 52 183 1.6E-27 T 18-10-2018 IPR008979 Galactose-binding-like domain superfamily CH53_1634 3a521b11c08c3787227c836540e407c0 760 Pfam PF03170 Bacterial cellulose synthase subunit 53 660 5.5E-223 T 18-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 CH53_1634 3a521b11c08c3787227c836540e407c0 760 Gene3D G3DSA:2.60.120.260 342 501 3.5E-24 T 18-10-2018 IPR008979 Galactose-binding-like domain superfamily CH53_1634 3a521b11c08c3787227c836540e407c0 760 PRINTS PR01440 Cellulose synthase subunit B signature 546 566 1.9E-34 T 18-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CH53_1634 3a521b11c08c3787227c836540e407c0 760 PRINTS PR01440 Cellulose synthase subunit B signature 80 101 1.9E-34 T 18-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CH53_1634 3a521b11c08c3787227c836540e407c0 760 PRINTS PR01440 Cellulose synthase subunit B signature 170 191 1.9E-34 T 18-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CH53_1634 3a521b11c08c3787227c836540e407c0 760 PRINTS PR01440 Cellulose synthase subunit B signature 212 235 1.9E-34 T 18-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CH53_1634 3a521b11c08c3787227c836540e407c0 760 PRINTS PR01440 Cellulose synthase subunit B signature 293 314 1.9E-34 T 18-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CH53_1634 3a521b11c08c3787227c836540e407c0 760 PRINTS PR01440 Cellulose synthase subunit B signature 376 397 1.9E-34 T 18-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CH53_1634 3a521b11c08c3787227c836540e407c0 760 PRINTS PR01440 Cellulose synthase subunit B signature 509 528 1.9E-34 T 18-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CH53_1634 3a521b11c08c3787227c836540e407c0 760 PRINTS PR01440 Cellulose synthase subunit B signature 699 719 1.9E-34 T 18-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CH53_241 d4b1eb5565a7c0f466e481b691493a1b 260 Pfam PF03609 PTS system sorbose-specific iic component 5 236 1.9E-69 T 18-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CH53_3643 848815fe49b83d8215b43d677a5ee222 179 Pfam PF07278 Protein of unknown function (DUF1441) 13 161 4.4E-51 T 18-10-2018 IPR009901 Bacteriophage VT1-Sakai, H0025 CH53_1316 20128863b752cb7e69d04f567b988fcb 187 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 185 8.7E-83 T 18-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CH53_1316 20128863b752cb7e69d04f567b988fcb 187 Gene3D G3DSA:3.40.30.10 24 185 2.9E-6 T 18-10-2018 CH53_1316 20128863b752cb7e69d04f567b988fcb 187 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 183 3.5E-75 T 18-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CH53_1654 d9c02838145274082ac95fd519326766 186 Pfam PF06210 Protein of unknown function (DUF1003) 50 150 3.3E-25 T 18-10-2018 IPR010406 Protein of unknown function DUF1003 CH53_282 1933a78cd4f47e5ee507795e8ff06207 145 Pfam PF07409 Phage protein GP46 30 141 3.8E-39 T 18-10-2018 IPR010877 Bacteriophage Mu, Gp46 CH53_3867 268b6bf02400059f22fbbd1bcf86e361 338 SUPERFAMILY SSF52172 7 137 2.42E-33 T 18-10-2018 IPR011006 CheY-like superfamily CH53_3867 268b6bf02400059f22fbbd1bcf86e361 338 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 55.796 T 18-10-2018 IPR028616 Regulator of RpoS CH53_3867 268b6bf02400059f22fbbd1bcf86e361 338 Pfam PF00072 Response regulator receiver domain 10 120 9.0E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_3867 268b6bf02400059f22fbbd1bcf86e361 338 Gene3D G3DSA:3.40.50.2300 2 129 5.6E-33 T 18-10-2018 CH53_3867 268b6bf02400059f22fbbd1bcf86e361 338 Gene3D G3DSA:3.60.40.10 138 321 9.7E-10 T 18-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CH53_3867 268b6bf02400059f22fbbd1bcf86e361 338 SMART SM00448 8 120 1.2E-28 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CH53_2761 283f739c11eb7b8e349783f2d3787e79 251 Pfam PF03942 DTW domain 47 231 9.6E-45 T 18-10-2018 IPR005636 DTW CH53_2761 283f739c11eb7b8e349783f2d3787e79 251 SMART SM01144 44 236 1.0E-77 T 18-10-2018 IPR005636 DTW CH53_1271 ef62e4d7a1d4a029cc5164a3c536d472 292 Pfam PF01136 Peptidase family U32 92 197 4.1E-11 T 18-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CH53_4317 c805a256f63f4c0dd50b5ff74241cb6e 157 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 65 157 7.9E-26 T 18-10-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CH53_3856 19ff0cf9daee3f1470433ef79311d5f7 96 Pfam PF07383 Protein of unknown function (DUF1496) 36 94 1.7E-25 T 18-10-2018 IPR009971 Protein of unknown function DUF1496 CH53_4058 ca03e1d7c04f6f5d85b35237801011b1 79 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 9 69 3.6E-26 T 18-10-2018 IPR014321 Phage shock protein, PspD CH53_4058 ca03e1d7c04f6f5d85b35237801011b1 79 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 9 69 4.2E-27 T 18-10-2018 IPR014321 Phage shock protein, PspD CH53_4288 e214ae7b4ff8b8498ddc27e7c063c3f8 413 Gene3D G3DSA:3.40.1090.10 83 196 2.0E-12 T 18-10-2018 CH53_4288 e214ae7b4ff8b8498ddc27e7c063c3f8 413 SUPERFAMILY SSF52151 86 271 2.88E-31 T 18-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CH53_4288 e214ae7b4ff8b8498ddc27e7c063c3f8 413 Pfam PF01734 Patatin-like phospholipase 86 271 8.1E-24 T 18-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CH53_58 25da17cd9eee46d1f9427360ab556e01 277 Pfam PF11392 Protein of unknown function (DUF2877) 160 264 4.7E-23 T 18-10-2018 IPR021530 Protein of unknown function DUF2877 CH53_922 68e14ff8ac071b18a1ec6f797648da6b 486 Gene3D G3DSA:1.10.443.10 265 468 2.3E-18 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CH53_922 68e14ff8ac071b18a1ec6f797648da6b 486 Pfam PF00589 Phage integrase family 289 445 4.1E-9 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CH53_922 68e14ff8ac071b18a1ec6f797648da6b 486 SUPERFAMILY SSF56349 133 454 7.36E-23 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CH53_3873 2e7508173f3d2e597930016f8f1732c3 214 Pfam PF01914 MarC family integral membrane protein 10 210 4.2E-73 T 18-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CH53_3873 2e7508173f3d2e597930016f8f1732c3 214 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 1.1E-79 T 18-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CH53_499 ec39cecf2c8b794ae1b6122f1cb77161 169 SUPERFAMILY SSF55729 3 163 4.4E-40 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_499 ec39cecf2c8b794ae1b6122f1cb77161 169 Pfam PF13302 Acetyltransferase (GNAT) domain 2 139 2.7E-24 T 18-10-2018 IPR000182 GNAT domain CH53_499 ec39cecf2c8b794ae1b6122f1cb77161 169 Gene3D G3DSA:3.40.630.30 1 167 5.7E-37 T 18-10-2018 CH53_3071 717a0ae2828d15aa9ad0f72cd70e5ea7 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 1.4E-54 T 18-10-2018 IPR009912 Zinc-ribbon containing domain CH53_2098 4c8dc04df20fe59e2acda868d31a6391 262 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 248 3.7E-106 T 18-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CH53_2098 4c8dc04df20fe59e2acda868d31a6391 262 SUPERFAMILY SSF110399 1 236 3.14E-84 T 18-10-2018 CH53_2098 4c8dc04df20fe59e2acda868d31a6391 262 Hamap MF_00443 Thiazole synthase [thiG]. 1 254 43.272 T 18-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CH53_2098 4c8dc04df20fe59e2acda868d31a6391 262 Gene3D G3DSA:3.20.20.70 1 254 7.5E-108 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CH53_2527 9aa8fdaa0f329de01761c14564959c76 428 Pfam PF16946 OMPG-porin 1 family 127 428 1.5E-129 T 18-10-2018 IPR031605 Putative OMPG-porin 1 family CH53_4336 674a8042a94a242ead5bf42b64ceed12 128 SUPERFAMILY SSF81296 30 128 2.17E-26 T 18-10-2018 IPR014756 Immunoglobulin E-set CH53_4336 674a8042a94a242ead5bf42b64ceed12 128 Gene3D G3DSA:2.60.40.1220 30 128 1.5E-25 T 18-10-2018 CH53_4336 674a8042a94a242ead5bf42b64ceed12 128 Pfam PF04234 CopC domain 31 127 1.2E-22 T 18-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 25 3.0E-4 T 18-10-2018 IPR024973 ESPR domain CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 625 646 1200.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 804 842 3100.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 698 732 3400.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 1724 1748 1800.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 1964 1994 2000.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 2185 2210 8900.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 1017 1039 3600.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 1138 1159 8500.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 2116 2140 810.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 1510 1531 5900.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 1910 1941 6300.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 1578 1602 2200.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 1051 1083 680.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 1819 1849 2000.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 1538 1559 3200.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 1431 1453 1200.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 1400 1424 980.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 1673 1703 1900.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 1164 1185 4300.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 2055 2086 4000.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 1764 1795 6400.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00710 2145 2165 2100.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SUPERFAMILY SSF51126 74 363 3.45E-49 T 18-10-2018 IPR011050 Pectin lyase fold/virulence factor CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 Gene3D G3DSA:2.160.20.10 74 452 9.5E-94 T 18-10-2018 IPR012334 Pectin lyase fold CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 104 178 2.3E-26 T 18-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal CH53_2781 dcc2f3e5c1f0a2378c51bd2ef93c647f 2322 SMART SM00912 70 182 1.2E-39 T 18-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal CH53_3531 32a54c69a27cb29f06335000d1b7752f 139 SUPERFAMILY SSF52402 3 138 1.26E-23 T 18-10-2018 CH53_3531 32a54c69a27cb29f06335000d1b7752f 139 Pfam PF00582 Universal stress protein family 2 138 1.0E-15 T 18-10-2018 IPR006016 UspA CH53_3531 32a54c69a27cb29f06335000d1b7752f 139 PIRSF PIRSF006276 1 139 1.7E-41 T 18-10-2018 IPR006015 Universal stress protein A CH53_3531 32a54c69a27cb29f06335000d1b7752f 139 Gene3D G3DSA:3.40.50.620 3 139 8.0E-30 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH53_3672 91786727bf7b4f97321935d72f29de87 177 SUPERFAMILY SSF49401 30 176 1.64E-32 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_3672 91786727bf7b4f97321935d72f29de87 177 Gene3D G3DSA:2.60.40.1090 42 176 6.3E-26 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_368 733620018e2ac3eaa9f294b962a7d2af 163 Pfam PF06496 Protein of unknown function (DUF1097) 8 141 1.4E-36 T 18-10-2018 IPR009476 Protein of unknown function DUF1097 CH53_3566 cd2a8def69378104731f58d992e71f3c 138 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 129 2.0E-33 T 18-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CH53_3566 cd2a8def69378104731f58d992e71f3c 138 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 50 1.0E-23 T 18-10-2018 IPR031576 Flagellar motor switch protein FliN, N-terminal CH53_3566 cd2a8def69378104731f58d992e71f3c 138 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 57 127 1.1E-25 T 18-10-2018 IPR001543 Surface presentation of antigen (SpoA) CH53_3566 cd2a8def69378104731f58d992e71f3c 138 Gene3D G3DSA:2.30.330.10 46 138 6.2E-35 T 18-10-2018 IPR036429 SpoA-like superfamily CH53_3566 cd2a8def69378104731f58d992e71f3c 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 103 1.9E-30 T 18-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CH53_3566 cd2a8def69378104731f58d992e71f3c 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 103 118 1.9E-30 T 18-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CH53_3566 cd2a8def69378104731f58d992e71f3c 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 57 73 1.9E-30 T 18-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CH53_3566 cd2a8def69378104731f58d992e71f3c 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 74 90 1.9E-30 T 18-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CH53_3566 cd2a8def69378104731f58d992e71f3c 138 SUPERFAMILY SSF101801 55 136 7.32E-27 T 18-10-2018 IPR036429 SpoA-like superfamily CH53_1360 af50826102eb748d78d1b0d9fa12b8ec 43 Pfam PF08085 Entericidin EcnA/B family 22 42 7.7E-11 T 18-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 CH53_1694 e92ab12a052d64af41b6db8aedf59167 239 Pfam PF11254 Protein of unknown function (DUF3053) 17 234 3.4E-93 T 18-10-2018 IPR021413 Protein of unknown function DUF3053 CH53_2689 52c47b09e1232aea0e4366c9521cc032 197 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 32 7.0E-6 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site CH53_2689 52c47b09e1232aea0e4366c9521cc032 197 PIRSF PIRSF004525 6 197 2.2E-69 T 18-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted CH53_2689 52c47b09e1232aea0e4366c9521cc032 197 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site CH53_2689 52c47b09e1232aea0e4366c9521cc032 197 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 32 8.6E-6 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site CH53_1416 8df78549d37791c1ca059fd4fe5d1320 207 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 194 1.5E-26 T 18-10-2018 IPR012842 Type III secretion system HrpE/YscL CH53_1416 8df78549d37791c1ca059fd4fe5d1320 207 Pfam PF06188 HrpE/YscL/FliH and V-type ATPase subunit E 19 163 2.3E-5 T 18-10-2018 IPR009335 Type III secretion system HrpE /V-type ATP synthase subunit E CH53_2780 136913792692bfd6dcb64eac78114f30 597 Gene3D G3DSA:2.40.160.50 213 594 3.2E-62 T 18-10-2018 CH53_2780 136913792692bfd6dcb64eac78114f30 597 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 243 549 2.8E-16 T 18-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal CH53_2780 136913792692bfd6dcb64eac78114f30 597 Gene3D G3DSA:3.10.20.310 80 167 3.1E-16 T 18-10-2018 CH53_2780 136913792692bfd6dcb64eac78114f30 597 Pfam PF08479 POTRA domain, ShlB-type 88 167 1.2E-14 T 18-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type CH53_704 fc0e741067c2c80af9cd80eab03eff5c 609 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 445 607 1.4E-33 T 18-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 CH53_704 fc0e741067c2c80af9cd80eab03eff5c 609 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 48 386 4.5E-13 T 18-10-2018 IPR010090 Phage tail tape measure protein CH53_704 fc0e741067c2c80af9cd80eab03eff5c 609 Pfam PF10145 Phage-related minor tail protein 85 284 3.5E-19 T 18-10-2018 IPR010090 Phage tail tape measure protein CH53_657 0b031194a6b2f461a158d1e3e7fcf136 126 SUPERFAMILY SSF63520 21 115 4.58E-7 T 18-10-2018 IPR036634 PRD domain superfamily GO:0006355 CH53_1783 cf258238617b6029bf560cc40f1f8f6b 223 Pfam PF07077 Protein of unknown function (DUF1345) 40 213 2.6E-53 T 18-10-2018 IPR009781 Protein of unknown function DUF1345 CH53_367 e02c59cf3de3434c7e4748eeee634eba 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 154 3.9E-35 T 18-10-2018 IPR004375 YhcH/YjgK/YiaL family CH53_367 e02c59cf3de3434c7e4748eeee634eba 155 Gene3D G3DSA:2.60.120.370 1 155 1.4E-37 T 18-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily CH53_367 e02c59cf3de3434c7e4748eeee634eba 155 SUPERFAMILY SSF51197 1 153 7.42E-40 T 18-10-2018 CH53_367 e02c59cf3de3434c7e4748eeee634eba 155 Pfam PF04074 Domain of unknown function (DUF386) 1 150 2.0E-36 T 18-10-2018 IPR004375 YhcH/YjgK/YiaL family CH53_1311 97ec337de3b6ba5936d2e2efdd43b730 1275 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 939 1275 1.2E-64 T 18-10-2018 IPR007452 Translocation and assembly module TamB CH53_2742 24830ac608ec8c76ac5fa0e49293fbea 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 4.0E-37 T 18-10-2018 IPR009624 Uncharacterised protein family UPF0253 CH53_2742 24830ac608ec8c76ac5fa0e49293fbea 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 26.143 T 18-10-2018 IPR009624 Uncharacterised protein family UPF0253 CH53_2742 24830ac608ec8c76ac5fa0e49293fbea 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 4.0E-30 T 18-10-2018 IPR009624 Uncharacterised protein family UPF0253 CH53_3127 4a73208c687ae7ce5bfb64329a0a45c7 161 Pfam PF08349 Protein of unknown function (DUF1722) 41 157 3.8E-36 T 18-10-2018 IPR013560 Domain of unknown function DUF1722 CH53_2042 55f7b4ad1b424e7d2f2172888d8361a7 765 Pfam PF16967 E-set like domain 263 331 8.8E-23 T 18-10-2018 IPR032636 Pilus assembly protein, E-set like domain CH53_3268 fcf2dd982c14f166f5958263d0fbacc7 388 Pfam PF04235 Protein of unknown function (DUF418) 216 374 2.6E-47 T 18-10-2018 IPR007349 Domain of unknown function DUF418 CH53_3959 679720822426a58df3e3b0876a5028c1 508 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 474 4.5E-144 T 18-10-2018 IPR010352 Protein of unknown function DUF945 CH53_1639 59c426694bd5f94d6c1838fabcacb6ab 64 Pfam PF11120 Cellulose biosynthesis protein BcsF 1 59 2.6E-30 T 18-10-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT CH53_1639 59c426694bd5f94d6c1838fabcacb6ab 64 TIGRFAM TIGR03493 cellullose_BcsF: celllulose biosynthesis operon protein BcsF/YhjT 1 62 2.8E-20 T 18-10-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT CH53_1639 59c426694bd5f94d6c1838fabcacb6ab 64 ProDom PD053231 YHJT MEMBRANE INNER BCSF 1 62 3.0E-7 T 18-10-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT CH53_3645 a31eb0025b3d737ec8f3aede541a99f8 253 Pfam PF05876 Phage terminase large subunit (GpA) 13 104 1.9E-14 T 18-10-2018 IPR008866 Bacteriophage lambda, GpA CH53_2911 92b36078569f2b0c8c4ae8e70236ef9e 341 Pfam PF00953 Glycosyl transferase family 4 77 231 9.6E-30 T 18-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 CH53_2842 42f2004bd77d8a7a89565becd3dd934b 165 PIRSF PIRSF006162 4 162 4.6E-61 T 18-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CH53_2842 42f2004bd77d8a7a89565becd3dd934b 165 SUPERFAMILY SSF101307 9 155 3.66E-50 T 18-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 CH53_2842 42f2004bd77d8a7a89565becd3dd934b 165 Pfam PF04608 Phosphatidylglycerophosphatase A 15 154 8.0E-54 T 18-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CH53_3833 06d602d6ebb504ba4372e3b1a04657c0 699 Pfam PF13332 Haemagluttinin repeat 39 125 2.2E-6 T 18-10-2018 IPR025157 Hemagglutinin repeat CH53_3833 06d602d6ebb504ba4372e3b1a04657c0 699 Pfam PF13332 Haemagluttinin repeat 439 610 1.1E-14 T 18-10-2018 IPR025157 Hemagglutinin repeat CH53_3833 06d602d6ebb504ba4372e3b1a04657c0 699 Pfam PF13332 Haemagluttinin repeat 160 305 5.0E-7 T 18-10-2018 IPR025157 Hemagglutinin repeat CH53_4163 ab4462bf2b8ad4329e6e64c06bafb9c1 113 Pfam PF05939 Phage minor tail protein 4 111 1.2E-30 T 18-10-2018 IPR010265 Bacteriophage lambda, GpM, minor tail CH53_1821 1e3b2f3938e21411a0d393bd5efde83a 569 Pfam PF05170 AsmA family 260 551 2.3E-14 T 18-10-2018 IPR007844 AsmA CH53_2939 e5ebbe1e7fc6dc1c882dace2d5a9c45b 179 Pfam PF13079 Protein of unknown function (DUF3916) 28 178 5.1E-52 T 18-10-2018 IPR025075 Protein of unknown function DUF3916 CH53_4369 05848c0bde8e76ccbe2e69ed01a25a54 91 Pfam PF13974 YebO-like protein 16 91 1.0E-29 T 18-10-2018 IPR025594 YebO-like protein CH53_3425 4389dbd8928b91a1db31662c0d898236 365 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 23 322 1.7E-68 T 18-10-2018 IPR010732 Type VI secretion, TssG-like CH53_3425 4389dbd8928b91a1db31662c0d898236 365 Pfam PF06996 Type VI secretion, TssG 23 322 6.5E-74 T 18-10-2018 IPR010732 Type VI secretion, TssG-like CH53_2404 d4521eb3205bc7737d835b246df52bf9 155 Pfam PF05433 Glycine zipper 2TM domain 62 103 1.3E-9 T 18-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CH53_3627 482e9e91c40cc153961f2d0f0390a247 75 Pfam PF13986 Domain of unknown function (DUF4224) 8 52 3.1E-16 T 18-10-2018 IPR025319 Domain of unknown function DUF4224 CH53_123 b81cc522161c2c84397a572387cfc4b5 409 Pfam PF04403 Paraquat-inducible protein A 236 396 1.7E-54 T 18-10-2018 IPR007498 Intermembrane transport protein PqiA-like CH53_123 b81cc522161c2c84397a572387cfc4b5 409 Pfam PF04403 Paraquat-inducible protein A 33 183 7.8E-40 T 18-10-2018 IPR007498 Intermembrane transport protein PqiA-like CH53_123 b81cc522161c2c84397a572387cfc4b5 409 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 1 395 4.0E-153 T 18-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type CH53_87 85e48843475da9e08ceae88b44a57abb 408 Pfam PF10129 OpgC protein 30 399 1.2E-61 T 18-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC CH53_546 1aac6b2710f799da1d548fdc28fbddf7 202 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 24 198 1.0E-76 T 18-10-2018 IPR010938 Protein of unknown function DUF1131 CH53_546 1aac6b2710f799da1d548fdc28fbddf7 202 Gene3D G3DSA:2.60.460.10 33 199 4.2E-67 T 18-10-2018 IPR038714 YfeY-like superfamily CH53_546 1aac6b2710f799da1d548fdc28fbddf7 202 Pfam PF06572 Protein of unknown function (DUF1131) 30 198 1.6E-83 T 18-10-2018 IPR010938 Protein of unknown function DUF1131 CH53_1011 064677665868c412f9f8614fbf3835de 174 Pfam PF05258 Protein of unknown function (DUF721) 26 98 4.9E-13 T 18-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 CH53_1440 700947ccb9ac2494ca1af29590a7f8a1 103 Pfam PF04341 Protein of unknown function, DUF485 11 98 2.3E-34 T 18-10-2018 IPR007436 Protein of unknown function DUF485 CH53_4232 2884d4387bfe183a7b1db206a8222465 237 Pfam PF04474 Protein of unknown function (DUF554) 2 229 1.2E-62 T 18-10-2018 IPR007563 Protein of unknown function DUF554 CH53_2170 d8c8081cdfd5d6a1318dfe0549073a3a 229 Pfam PF04172 LrgB-like family 14 225 7.4E-71 T 18-10-2018 IPR007300 CidB/LrgB family CH53_3619 4bffec3e33016016e51e34234bfa2602 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 7.0E-39 T 18-10-2018 CH53_3697 b25b3c517317a9fb20993910dd00a4ac 170 Gene3D G3DSA:3.30.420.150 32 169 9.7E-6 T 18-10-2018 CH53_36 d15153efbe61f8ca0675090d63565741 76 Pfam PF07119 Protein of unknown function (DUF1375) 11 42 2.2E-4 T 18-10-2018 IPR010780 Protein of unknown function DUF1375 CH53_3675 ae08ef1de73eff459266630d9d6388d3 127 SUPERFAMILY SSF54593 2 126 1.38E-18 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_3675 ae08ef1de73eff459266630d9d6388d3 127 Gene3D G3DSA:3.10.180.10 1 126 3.4E-32 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH53_3675 ae08ef1de73eff459266630d9d6388d3 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 65 121 1.8E-5 T 18-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CH53_3704 0d6b13fe6c24711cd6eed14bb37ea0ba 644 Pfam PF03239 Iron permease FTR1 family 156 561 7.3E-82 T 18-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 CH53_1891 c1901a89a606ed93bdb514d889fc8ed6 144 Pfam PF05656 Protein of unknown function (DUF805) 7 132 7.5E-21 T 18-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 CH53_3702 d5378ecf410776666d0ea38135f708a1 101 PIRSF PIRSF000699 1 101 2.3E-34 T 18-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CH53_3702 d5378ecf410776666d0ea38135f708a1 101 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 3.2E-33 T 18-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CH53_3702 d5378ecf410776666d0ea38135f708a1 101 SUPERFAMILY SSF46973 1 100 6.41E-34 T 18-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 CH53_3702 d5378ecf410776666d0ea38135f708a1 101 Gene3D G3DSA:1.20.58.280 2 101 6.5E-36 T 18-10-2018 CH53_1395 1446b9d6c787d0d81585f697b7ebbbea 59 Gene3D G3DSA:2.10.70.10 22 59 1.5E-18 T 18-10-2018 CH53_1395 1446b9d6c787d0d81585f697b7ebbbea 59 Pfam PF10636 Hemin uptake protein hemP 24 59 3.1E-17 T 18-10-2018 IPR019600 Hemin uptake protein HemP CH53_897 981e3a4738f169e699cafe56747210b3 164 Gene3D G3DSA:2.60.40.1090 40 164 1.4E-32 T 18-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 CH53_897 981e3a4738f169e699cafe56747210b3 164 SUPERFAMILY SSF49401 37 164 1.04E-20 T 18-10-2018 IPR008966 Adhesion domain superfamily CH53_897 981e3a4738f169e699cafe56747210b3 164 Pfam PF00419 Fimbrial protein 29 164 1.2E-14 T 18-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CH53_904 d3397debd9af33143e3333fd7173564c 87 Gene3D G3DSA:1.10.10.10 25 81 2.4E-9 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_4283 580d4330d32412caf1647657cef127da 80 Pfam PF07351 Protein of unknown function (DUF1480) 1 79 2.9E-43 T 18-10-2018 IPR009950 Protein of unknown function DUF1480 CH53_4283 580d4330d32412caf1647657cef127da 80 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 3 79 2.0E-32 T 18-10-2018 IPR009950 Protein of unknown function DUF1480 CH53_3027 4be25d8e795f9e1d7679ef2a05a8dce1 73 SUPERFAMILY SSF55729 1 47 2.9E-8 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase CH53_3027 4be25d8e795f9e1d7679ef2a05a8dce1 73 Gene3D G3DSA:3.40.630.30 1 52 7.5E-8 T 18-10-2018 CH53_1726 61b34ece905ac9fccb18a9f47bed6037 107 SUPERFAMILY SSF46973 1 98 1.44E-35 T 18-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 CH53_1726 61b34ece905ac9fccb18a9f47bed6037 107 Gene3D G3DSA:1.20.58.280 1 101 3.8E-35 T 18-10-2018 CH53_1726 61b34ece905ac9fccb18a9f47bed6037 107 PIRSF PIRSF000699 1 105 3.4E-33 T 18-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CH53_1726 61b34ece905ac9fccb18a9f47bed6037 107 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 97 3.1E-34 T 18-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CH53_2375 159d1608c98f5c7a7912abd0f21c8685 193 Pfam PF16964 Putative tight adherence pilin protein F 10 193 7.6E-45 T 18-10-2018 IPR031582 Putative tight adherence pilin protein F CH53_3982 8d120a7df4bfaf90fa9b82fc10101914 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 1.5E-119 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CH53_3982 8d120a7df4bfaf90fa9b82fc10101914 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 1.5E-119 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CH53_3982 8d120a7df4bfaf90fa9b82fc10101914 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 1.5E-119 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CH53_3982 8d120a7df4bfaf90fa9b82fc10101914 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 1.5E-119 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CH53_3982 8d120a7df4bfaf90fa9b82fc10101914 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 1.5E-119 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CH53_3982 8d120a7df4bfaf90fa9b82fc10101914 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 1.5E-119 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CH53_3982 8d120a7df4bfaf90fa9b82fc10101914 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 1.5E-119 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CH53_3982 8d120a7df4bfaf90fa9b82fc10101914 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 1.5E-119 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CH53_3982 8d120a7df4bfaf90fa9b82fc10101914 429 Pfam PF02040 Arsenical pump membrane protein 3 423 4.2E-156 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CH53_3982 8d120a7df4bfaf90fa9b82fc10101914 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 427 2.4E-220 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CH53_1453 cc3c2b84b495bcae0beacf4feef1d96e 373 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 65 280 2.5E-80 T 18-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CH53_1453 cc3c2b84b495bcae0beacf4feef1d96e 373 SUPERFAMILY SSF102405 77 281 2.75E-41 T 18-10-2018 CH53_1453 cc3c2b84b495bcae0beacf4feef1d96e 373 Gene3D G3DSA:3.40.50.450 2 285 1.6E-88 T 18-10-2018 CH53_1453 cc3c2b84b495bcae0beacf4feef1d96e 373 Pfam PF02481 DNA recombination-mediator protein A 68 274 3.4E-76 T 18-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CH53_3211 dd7a6e1dbd7d99212d3d3c53266b9927 367 Pfam PF05076 Suppressor of fused protein (SUFU) 201 363 1.7E-21 T 18-10-2018 IPR020941 Suppressor of fused-like domain Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 CH53_894 d70fd38926cfd27830ee36d66c424a65 62 Pfam PF15959 Domain of unknown function (DUF4762) 1 62 1.2E-18 T 18-10-2018 IPR031882 Protein of unknown function DUF4762 CH53_1842 8a4d8dbb2c278e708b5f88ef43c0305d 235 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 3 213 6.0E-34 T 18-10-2018 CH53_520 4800483b2a0ee8ffbe0b2f86bf99bedc 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 4.0E-23 T 18-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CH53_520 4800483b2a0ee8ffbe0b2f86bf99bedc 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 5.3E-31 T 18-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CH53_2386 1d92ad85d06b8add3606fe54594b4567 140 Pfam PF01478 Type IV leader peptidase family 11 108 3.4E-10 T 18-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CH53_1530 eaccaa12a8b9de527c85ae249e85e30e 150 Pfam PF11162 Protein of unknown function (DUF2946) 13 146 6.8E-16 T 18-10-2018 IPR021333 Protein of unknown function DUF2946 CH53_748 59a27c256269e1d804a366ea08cd1d71 132 Hamap MF_00546 Acid shock protein [asr]. 1 132 15.486 T 18-10-2018 IPR023497 Acid shock protein CH53_1196 6ca038fbc3aab12a6a0aa889ea026952 671 SUPERFAMILY SSF53649 284 593 1.13E-24 T 18-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CH53_1196 6ca038fbc3aab12a6a0aa889ea026952 671 Gene3D G3DSA:3.40.720.10 272 588 1.1E-36 T 18-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CH53_1196 6ca038fbc3aab12a6a0aa889ea026952 671 Pfam PF00884 Sulfatase 286 577 3.4E-23 T 18-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CH53_207 3abeeb393073d0ca3eed54f32e9825dd 102 Pfam PF07214 Protein of unknown function (DUF1418) 1 96 1.9E-39 T 18-10-2018 IPR010815 Protein of unknown function DUF1418 CH53_3177 f6c81efd12a15e80608b65ebd0549a51 46 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 45 1.4E-29 T 18-10-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 CH53_3177 f6c81efd12a15e80608b65ebd0549a51 46 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 18.883 T 18-10-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 CH53_4182 87e3757c4f20e98bbc5e71f75184c124 229 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 15 94 1.1E-13 T 18-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family CH53_4182 87e3757c4f20e98bbc5e71f75184c124 229 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 9 101 3.3E-16 T 18-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family CH53_2852 baf7bd2aeb1f2ec3d1cac4fbacf49e3d 115 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 18 113 2.9E-40 T 18-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 CH53_2852 baf7bd2aeb1f2ec3d1cac4fbacf49e3d 115 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 25 98 8.5E-19 T 18-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 CH53_26 6c5f8c8807354046ad1921d40a4253b9 362 Pfam PF03916 Polysulphide reductase, NrfD 8 283 4.6E-20 T 18-10-2018 IPR005614 NrfD family CH53_4298 5ba3e85ccc5673eb4c8be206f61954a3 58 Pfam PF10753 Toxin GhoT_OrtT 8 58 6.7E-17 T 18-10-2018 IPR019689 Toxin GhoT/OrtT CH53_3682 7cb96febf8cd8035b9c1474ef12350b7 116 Pfam PF04343 Protein of unknown function, DUF488 7 112 1.3E-23 T 18-10-2018 IPR007438 Protein of unknown function DUF488 CH53_293 8ce8f27e1ef14242e6678130676c085b 109 Pfam PF10828 Protein of unknown function (DUF2570) 9 106 1.3E-7 T 18-10-2018 IPR022538 Protein of unknown function DUF2570 CH53_1776 86f67eb7eaf842967695a24dcd31a001 127 Pfam PF03899 ATP synthase I chain 13 109 1.8E-17 T 18-10-2018 IPR005598 ATP synthase protein I CH53_3169 c2480a25a0ab08f92659b88ded73ce45 111 Pfam PF07769 psiF repeat 33 65 3.5E-17 T 18-10-2018 IPR011690 Phosphate-starvation-induced PsiF repeat CH53_3169 c2480a25a0ab08f92659b88ded73ce45 111 Pfam PF07769 psiF repeat 76 108 6.3E-20 T 18-10-2018 IPR011690 Phosphate-starvation-induced PsiF repeat CH53_442 1046252225f7acdbef84b3aa936a2912 254 Pfam PF04333 MlaA lipoprotein 31 224 3.5E-66 T 18-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CH53_442 1046252225f7acdbef84b3aa936a2912 254 PRINTS PR01805 VacJ lipoprotein signature 32 45 8.8E-33 T 18-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CH53_442 1046252225f7acdbef84b3aa936a2912 254 PRINTS PR01805 VacJ lipoprotein signature 140 157 8.8E-33 T 18-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CH53_442 1046252225f7acdbef84b3aa936a2912 254 PRINTS PR01805 VacJ lipoprotein signature 50 66 8.8E-33 T 18-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CH53_442 1046252225f7acdbef84b3aa936a2912 254 PRINTS PR01805 VacJ lipoprotein signature 101 118 8.8E-33 T 18-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CH53_3582 cf5e1438c4e9a6a03f26b1a6ff548f08 820 Gene3D G3DSA:2.160.20.10 177 553 5.3E-20 T 18-10-2018 IPR012334 Pectin lyase fold CH53_3582 cf5e1438c4e9a6a03f26b1a6ff548f08 820 SUPERFAMILY SSF51126 224 553 3.43E-10 T 18-10-2018 IPR011050 Pectin lyase fold/virulence factor CH53_3582 cf5e1438c4e9a6a03f26b1a6ff548f08 820 Gene3D G3DSA:1.10.10.10 706 820 6.2E-28 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_2288 755548c1649afb2ceee2814de043bb65 131 Pfam PF07681 DoxX 8 88 4.2E-16 T 18-10-2018 IPR032808 DoxX family CH53_1221 d8d90a6ca260d8bfad256562fbc0855f 168 ProDom PD030925 PLASMID TRANSCRIPTION REP DNA-BINDING REGULATION 14-3 REPLICATION ORF REP14-2 CMK25 53 152 0.006 T 18-10-2018 CH53_1221 d8d90a6ca260d8bfad256562fbc0855f 168 Pfam PF05732 Firmicute plasmid replication protein (RepL) 45 154 2.4E-5 T 18-10-2018 IPR008813 Plasmid replication protein, RepL GO:0006260|GO:0006276 CH53_411 31cf53b89061955ffa2f57673af56d0c 220 Pfam PF09335 SNARE associated Golgi protein 49 177 2.5E-26 T 18-10-2018 IPR032816 SNARE associated Golgi protein CH53_4243 8538782744f33beb7b3365445345fd4d 80 Gene3D G3DSA:1.10.150.20 9 76 3.1E-5 T 18-10-2018 CH53_1831 f22ac3d84ecd6615acb3fc56c27b0462 154 Pfam PF12098 Protein of unknown function (DUF3574) 55 154 2.5E-36 T 18-10-2018 IPR021957 Protein of unknown function DUF3574 CH53_1545 bbb0b1db64bb5f82707f170706ba2bc4 119 Pfam PF10748 Protein of unknown function (DUF2531) 23 99 1.3E-6 T 18-10-2018 IPR019684 HofP protein CH53_4175 95eaf3418c246199511c430491e6cbb4 370 PIRSF PIRSF034565 6 370 1.5E-167 T 18-10-2018 IPR017029 Putative phage head morphogenesis protein CH53_4060 0e075b3f59e1526cd5d0687be7c46df6 75 Pfam PF06667 Phage shock protein B 4 74 1.2E-34 T 18-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 CH53_4060 0e075b3f59e1526cd5d0687be7c46df6 75 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 6.6E-36 T 18-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 CH53_4192 1ad7771f22889b92c0cc734b0981117e 149 Pfam PF07105 Protein of unknown function (DUF1367) 73 147 3.2E-11 T 18-10-2018 IPR009797 Protein of unknown function DUF1367 CH53_4192 1ad7771f22889b92c0cc734b0981117e 149 Pfam PF07105 Protein of unknown function (DUF1367) 2 71 1.9E-11 T 18-10-2018 IPR009797 Protein of unknown function DUF1367 CH53_1078 0963c402dbc439aaa5ccdc6b2e74b667 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 181 5.7E-44 T 18-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 CH53_2574 5cfc79bc48eae04f2ee6c5f2abc0e2a7 249 Pfam PF01925 Sulfite exporter TauE/SafE 15 240 9.8E-32 T 18-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CH53_650 37f6ece023495339ab1ba80f77c4ee85 338 Pfam PF03824 High-affinity nickel-transport protein 74 324 4.3E-43 T 18-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CH53_4224 87a7332bb2eaad02c0f13e5b3a2d3a75 211 SUPERFAMILY SSF53335 4 91 4.04E-6 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CH53_4224 87a7332bb2eaad02c0f13e5b3a2d3a75 211 Pfam PF05063 MT-A70 4 91 2.3E-13 T 18-10-2018 IPR007757 MT-A70-like CH53_4224 87a7332bb2eaad02c0f13e5b3a2d3a75 211 Pfam PF05063 MT-A70 120 196 1.6E-9 T 18-10-2018 IPR007757 MT-A70-like CH53_280 fbf9d5a0bfcf8f727a686d93e469c08a 198 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 12 196 3.6E-39 T 18-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 CH53_4129 39eb00ade171be8de28c3be8f8dbbdaa 128 Gene3D G3DSA:1.10.3730.20 34 126 3.7E-7 T 18-10-2018 CH53_4129 39eb00ade171be8de28c3be8f8dbbdaa 128 SUPERFAMILY SSF103481 42 123 3.14E-10 T 18-10-2018 CH53_4129 39eb00ade171be8de28c3be8f8dbbdaa 128 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 2 126 22.475 T 18-10-2018 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF CH53_1452 5764ad0f06b9c074510dd1746ec939c8 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 8.7E-61 T 18-10-2018 IPR007456 Smg CH53_1452 5764ad0f06b9c074510dd1746ec939c8 157 Hamap MF_00598 Protein Smg [smg]. 1 157 32.486 T 18-10-2018 IPR007456 Smg CH53_88 86d4e4daa23710c3ecb4397a59b41870 247 Gene3D G3DSA:1.10.10.10 14 116 4.6E-8 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CH53_88 86d4e4daa23710c3ecb4397a59b41870 247 Pfam PF00486 Transcriptional regulatory protein, C terminal 30 101 6.7E-5 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CH53_88 86d4e4daa23710c3ecb4397a59b41870 247 SUPERFAMILY SSF46894 24 102 1.19E-7 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CH53_314 da637c80604830b9fd717af516f2f064 457 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 62 308 6.6E-21 T 18-10-2018 IPR010839 Acyclic terpene utilisation CH53_3519 bea83bd350742211bc4b96a4f2c719e3 301 Pfam PF11004 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 27 300 3.0E-111 T 18-10-2018 IPR021266 Kdo hydroxylase CH53_4321 0998a607c118dabebb29a518c6d5a533 55 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 24 55 8.1E-11 T 18-10-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CH53_4089 92aebe81b8c6c3aad7874748b931f5f4 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 4.0E-19 T 18-10-2018 IPR010710 Protein of unknown function DUF1289 CH53_2949 4d062c85b4b420852e70cdc6c6a4e655 157 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 143 3.0E-32 T 18-10-2018 IPR006750 Putative inner membrane exporter, YdcZ CH53_21 a38d2b018f577f9c6cf00372e6f32769 37 Pfam PF10968 Protein of unknown function (DUF2770) 2 37 2.2E-19 T 18-10-2018 IPR024494 Protein of unknown function DUF2770 CH53_1841 d6626dfeac2036f376fa8a62bf86294a 82 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 8.2E-19 T 18-10-2018 IPR007684 Zinc finger, Ogr/Delta-type CH53_4294 8e985786a7a38bd1023d225d7e52637a 325 SUPERFAMILY SSF103481 66 146 1.29E-5 T 18-10-2018 CH53_4294 8e985786a7a38bd1023d225d7e52637a 325 SUPERFAMILY SSF103481 198 296 2.48E-12 T 18-10-2018 CH53_4294 8e985786a7a38bd1023d225d7e52637a 325 Pfam PF00892 EamA-like transporter family 10 143 9.1E-12 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_4294 8e985786a7a38bd1023d225d7e52637a 325 Pfam PF00892 EamA-like transporter family 160 295 1.9E-20 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CH53_77 df4007ac996831e50c415c1cd6707fb7 446 Pfam PF11329 Protein of unknown function (DUF3131) 42 406 1.2E-113 T 18-10-2018 IPR021478 Protein of unknown function DUF3131 CH53_4139 2f94de53d672baf49d1e914221d4f152 154 Pfam PF10697 Protein of unknown function (DUF2502) 23 104 4.9E-32 T 18-10-2018 IPR019638 Protein of unknown function DUF2502 CH53_4323 da256b11e56e1aed044a6e6d6188ea4a 155 TIGRFAM TIGR02642 phage_xxxx: uncharacterized phage protein 1 130 3.0E-56 T 18-10-2018 IPR013464 Conserved hypothetical protein CHP02642 CH53_496 0b69f8a7e5082ef00e1efe690a7c0cc2 143 Pfam PF15970 HicB_like antitoxin of bacterial toxin-antitoxin system 4 83 8.0E-43 T 18-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system CH53_206 a0a83733d8be17203a5a24886dbe7f50 161 Pfam PF10722 Putative bacterial sensory transduction regulator 9 130 4.1E-14 T 18-10-2018 IPR019660 Putative sensory transduction regulator YbjN CH53_3665 4e0f8ee958d08347b53e669408ec24b2 157 Gene3D G3DSA:3.10.450.160 58 157 2.0E-41 T 18-10-2018 CH53_2892 4ff6d2d28f1cbc619d5bb930ae77ac9f 118 Pfam PF02635 DsrE/DsrF-like family 5 118 5.6E-21 T 18-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein CH53_2892 4ff6d2d28f1cbc619d5bb930ae77ac9f 118 SUPERFAMILY SSF75169 4 118 1.19E-32 T 18-10-2018 IPR027396 DsrEFH-like CH53_2892 4ff6d2d28f1cbc619d5bb930ae77ac9f 118 Gene3D G3DSA:3.40.1260.10 3 118 1.4E-31 T 18-10-2018 IPR027396 DsrEFH-like CH53_2292 c7f72fca4ab13e25d05c0b74b5d97587 125 Pfam PF06476 Protein of unknown function (DUF1090) 14 120 3.0E-35 T 18-10-2018 IPR009468 Protein of unknown function DUF1090 CH53_1742 10c54e58f5f12f566ccd419e903eba4b 190 Gene3D G3DSA:3.40.50.360 3 190 4.7E-60 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_1742 10c54e58f5f12f566ccd419e903eba4b 190 Pfam PF03358 NADPH-dependent FMN reductase 7 149 2.1E-38 T 18-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CH53_1742 10c54e58f5f12f566ccd419e903eba4b 190 SUPERFAMILY SSF52218 7 180 2.48E-44 T 18-10-2018 IPR029039 Flavoprotein-like superfamily CH53_3381 9de64b7e6bea318d28e1911217d38c2d 268 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 10 258 5.4E-52 T 18-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 CH53_3381 9de64b7e6bea318d28e1911217d38c2d 268 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 9 259 2.8E-71 T 18-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 CH53_2540 387663260bc825cebaf7733e60357373 375 Pfam PF06812 ImpA, N-terminal, type VI secretion system 17 140 1.9E-24 T 18-10-2018 IPR010657 ImpA, N-terminal CH53_579 3421142b9d67a1daf052b871b0d4a437 354 Pfam PF01594 AI-2E family transporter 19 345 2.7E-80 T 18-10-2018 IPR002549 Transmembrane protein TqsA-like CH53_1547 17e7c011d236b4cbb9680fa34acc208e 181 Pfam PF05137 Fimbrial assembly protein (PilN) 101 166 1.0E-11 T 18-10-2018 IPR007813 Fimbrial assembly PilN CH53_3947 022079dd18bc5b526d52ac74d811ac6c 351 Pfam PF02653 Branched-chain amino acid transport system / permease component 81 338 3.4E-43 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_279 21b30dc66294053fb0f9a89c5159451b 226 Gene3D G3DSA:2.60.40.3940 127 226 1.5E-8 T 18-10-2018 CH53_3508 d824e674a85e8672054e7b704e008c44 224 Pfam PF07608 Protein of unknown function (DUF1571) 69 209 6.4E-6 T 18-10-2018 IPR011465 Protein of unknown function DUF1571 CH53_281 a73ac8a64e3961974321c7b22ed50c2a 378 Pfam PF04865 Baseplate J-like protein 66 340 1.7E-77 T 18-10-2018 IPR006949 Baseplate protein J-like CH53_2599 a2767001c39aeb0e288588c2a3198814 137 Pfam PF04143 Sulphur transport 42 130 4.2E-8 T 18-10-2018 IPR007272 Sulphur transport domain CH53_1428 baa17ae2a50a9dd383a4863e2369689a 461 Pfam PF04888 Secretion system effector C (SseC) like family 97 458 2.2E-52 T 18-10-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 CH53_3112 075563f2c4faf97199e8010a5dbe59fe 70 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 16 65 2.1E-15 T 18-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 CH53_3937 e919f17edeefb4f9ad865260d730b84e 147 Pfam PF10754 Protein of unknown function (DUF2569) 7 145 2.6E-45 T 18-10-2018 IPR019690 Protein of unknown function DUF2569 CH53_2370 a4b2c528b206983de0792376028f11ea 220 Pfam PF09335 SNARE associated Golgi protein 48 173 1.3E-16 T 18-10-2018 IPR032816 SNARE associated Golgi protein CH53_3343 5300a3f076bbf917ae2177d5ebee9f98 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 306 1.5E-34 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CH53_3547 a0d86ffac9567378a1378da94d0ecaf6 140 Pfam PF06366 Flagellar protein FlhE 35 140 2.2E-37 T 18-10-2018 IPR009420 Flagellar protein FlhE CH53_4334 1407865e654542fd7dfa2761a4a36dc6 113 Pfam PF10709 Protein of unknown function (DUF2511) 25 111 4.4E-43 T 18-10-2018 IPR019648 Protein of unknown function DUF2511 CH53_518 d29637ee562ed1958019b0cb794f5e49 190 Pfam PF06042 Nucleotidyltransferase 23 183 1.2E-63 T 18-10-2018 IPR009267 Putative nucleotidyltransferase CH53_4325 fed80566e4cd90d4f1f10db23d49e5e6 313 Pfam PF13391 HNH endonuclease 210 261 2.1E-8 T 18-10-2018 IPR003615 HNH nuclease CH53_3611 f844f1d45b370ae5fb5c062b43cca62b 63 Pfam PF08410 Domain of unknown function (DUF1737) 12 59 1.6E-19 T 18-10-2018 IPR013619 Domain of unknown function DUF1737 CH53_624 6e5154ce5af1ba5f3b3f30e360db6672 318 Pfam PF03547 Membrane transport protein 16 147 2.1E-8 T 18-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CH53_624 6e5154ce5af1ba5f3b3f30e360db6672 318 Pfam PF03547 Membrane transport protein 168 307 2.7E-10 T 18-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CH53_2440 0fdc28396570dcf317e4cf55a4c0d3b8 72 Pfam PF01810 LysE type translocator 17 67 1.1E-6 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CH53_4318 a9ccf10c2c44698e7b4836a20e3f7e0f 412 Gene3D G3DSA:2.20.70.120 301 332 4.0E-7 T 18-10-2018 CH53_1514 6e59278fcf27c85717fbae7335eb1f9f 200 Pfam PF01810 LysE type translocator 16 181 6.4E-16 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CH53_430 77f9076a02bd5a0cd5499cc5681d16be 91 Pfam PF08891 YfcL protein 4 86 5.4E-36 T 18-10-2018 IPR014987 Uncharacterised protein family YfcL CH53_1228 72090e33169bac9b629861602810e114 94 Pfam PF06412 Conjugal transfer protein TraD 27 86 8.4E-13 T 18-10-2018 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 CH53_1618 0a32d95a2076677c614a468f52abf89e 704 Pfam PF05170 AsmA family 1 597 3.0E-133 T 18-10-2018 IPR007844 AsmA CH53_2169 d4ad29d57a97f86be38b2e3a8aa8fd7e 141 Pfam PF03788 LrgA family 30 122 5.8E-27 T 18-10-2018 IPR005538 LrgA/CidA family GO:0016021 CH53_3614 dce120b11cee36e5eca52e3e64b2f108 109 SUPERFAMILY SSF51182 30 100 5.18E-7 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily CH53_3479 1791ec5ff9486d9250c421c5da4f5a7b 159 Pfam PF15948 Domain of unknown function (DUF4756) 1 157 1.6E-93 T 18-10-2018 IPR031864 Protein of unknown function DUF4756 CH53_2492 0bd19eb28c8d6c78993c1b0523cdae7b 174 Pfam PF12915 Protein of unknown function (DUF3833) 12 172 3.7E-65 T 18-10-2018 IPR024409 Protein of unknown function DUF3833 CH53_4370 ac4521455bb92125203ff080c71f5b13 77 Pfam PF13996 YobH-like protein 3 70 1.0E-35 T 18-10-2018 IPR025611 YobH-like protein CH53_3106 eb5d15846a7c771eaab27a9db4170503 95 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 88 6.7E-8 T 18-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 CH53_2878 17b147e9036e2fc20f13f6c57966d0f9 184 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 48 152 1.1E-41 T 18-10-2018 IPR039366 YscW/ExsB