locus-tag class description HRD70_00005 PF01966 HD domain HRD70_00005 PF01909 Nucleotidyltransferase domain HRD70_00005 PF08335 GlnD PII-uridylyltransferase HRD70_00005 PF01842 ACT domain HRD70_00010 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HRD70_00010 PF14602 Hexapeptide repeat of succinyl-transferase HRD70_00010 PF00132 Bacterial transferase hexapeptide (six repeats) HRD70_00015 PF11944 Protein of unknown function (DUF3461) HRD70_00020 PF00258 Flavodoxin HRD70_00025 PF00849 RNA pseudouridylate synthase HRD70_00030 PF04287 tRNA pseudouridine synthase C HRD70_00040 PF07348 Syd protein (SUKH-2) HRD70_00045 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HRD70_00045 PF14489 QueF-like protein HRD70_00050 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HRD70_00050 PF11892 Domain of unknown function (DUF3412) HRD70_00050 PF03641 Possible lysine decarboxylase HRD70_00055 PF01367 5'-3' exonuclease, C-terminal SAM fold HRD70_00055 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HRD70_00060 PF18125 RlmM ferredoxin-like domain HRD70_00060 PF01728 FtsJ-like methyltransferase HRD70_00065 PF04241 Protein of unknown function (DUF423) HRD70_00070 PF03466 LysR substrate binding domain HRD70_00070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_00080 PF06004 Bacterial protein of unknown function (DUF903) HRD70_00085 PF00266 Aminotransferase class-V HRD70_00090 PF02657 Fe-S metabolism associated domain HRD70_00095 PF00899 ThiF family HRD70_00100 PF06725 3D domain HRD70_00100 PF03562 MltA specific insert domain HRD70_00120 PF01520 N-acetylmuramoyl-L-alanine amidase HRD70_00120 PF11741 AMIN domain HRD70_00125 PF00696 Amino acid kinase family HRD70_00125 PF00583 Acetyltransferase (GNAT) family HRD70_00130 PF13538 UvrD-like helicase C-terminal domain HRD70_00140 PF05193 Peptidase M16 inactive domain HRD70_00140 PF16187 Middle or third domain of peptidase_M16 HRD70_00140 PF00675 Insulinase (Peptidase family M16) HRD70_00145 PF17946 RecC C-terminal domain HRD70_00150 PF12528 Type II secretion prepilin peptidase dependent protein C HRD70_00150 PF07963 Prokaryotic N-terminal methylation motif HRD70_00165 PF07963 Prokaryotic N-terminal methylation motif HRD70_00165 PF00114 Pilin (bacterial filament) HRD70_00170 PF00303 Thymidylate synthase HRD70_00175 PF01790 Prolipoprotein diacylglyceryl transferase HRD70_00180 PF01590 GAF domain HRD70_00180 PF02896 PEP-utilising enzyme, TIM barrel domain HRD70_00180 PF00391 PEP-utilising enzyme, mobile domain HRD70_00180 PF05524 PEP-utilising enzyme, N-terminal HRD70_00185 PF00293 NUDIX domain HRD70_00190 PF02976 DNA mismatch repair enzyme MutH HRD70_00195 PF03741 Integral membrane protein TerC family HRD70_00200 PF00248 Aldo/keto reductase family HRD70_00205 PF07690 Major Facilitator Superfamily HRD70_00210 PF13193 AMP-binding enzyme C-terminal domain HRD70_00210 PF00501 AMP-binding enzyme HRD70_00210 PF01553 Acyltransferase HRD70_00215 PF01568 Molydopterin dinucleotide binding domain HRD70_00215 PF00384 Molybdopterin oxidoreductase HRD70_00220 PF00356 Bacterial regulatory proteins, lacI family HRD70_00225 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HRD70_00225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HRD70_00230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_00230 PF03466 LysR substrate binding domain HRD70_00235 PF07690 Major Facilitator Superfamily HRD70_00240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_00240 PF03466 LysR substrate binding domain HRD70_00255 PF00672 HAMP domain HRD70_00255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRD70_00255 PF02203 Tar ligand binding domain homologue HRD70_00275 PF06750 Bacterial Peptidase A24 N-terminal domain HRD70_00275 PF01478 Type IV leader peptidase family HRD70_00305 PF08334 Type II secretion system (T2SS), protein G HRD70_00305 PF07963 Prokaryotic N-terminal methylation motif HRD70_00310 PF00482 Type II secretion system (T2SS), protein F HRD70_00315 PF00437 Type II/IV secretion system protein HRD70_00320 PF00263 Bacterial type II and III secretion system protein HRD70_00320 PF03958 Bacterial type II/III secretion system short domain HRD70_00335 PF00484 Carbonic anhydrase HRD70_00340 PF01638 HxlR-like helix-turn-helix HRD70_00360 PF01556 DnaJ C terminal domain HRD70_00360 PF00226 DnaJ domain HRD70_00365 PF00356 Bacterial regulatory proteins, lacI family HRD70_00370 PF07690 Major Facilitator Superfamily HRD70_00375 PF01055 Glycosyl hydrolases family 31 HRD70_00375 PF13802 Galactose mutarotase-like HRD70_00375 PF16338 Domain of unknown function (DUF4968) HRD70_00375 PF17137 Domain of unknown function (DUF5110) HRD70_00385 PF01037 Lrp/AsnC ligand binding domain HRD70_00390 PF08448 PAS fold HRD70_00390 PF00990 Diguanylate cyclase, GGDEF domain HRD70_00395 PF00440 Bacterial regulatory proteins, tetR family HRD70_00395 PF17754 MftR C-terminal domain HRD70_00400 PF07690 Major Facilitator Superfamily HRD70_00405 PF13474 SnoaL-like domain HRD70_00410 PF03797 Autotransporter beta-domain HRD70_00435 PF00005 ABC transporter HRD70_00440 PF02653 Branched-chain amino acid transport system / permease component HRD70_00445 PF02653 Branched-chain amino acid transport system / permease component HRD70_00450 PF00480 ROK family HRD70_00470 PF02899 Phage integrase, N-terminal SAM-like domain HRD70_00470 PF00589 Phage integrase family HRD70_00480 PF01336 OB-fold nucleic acid binding domain HRD70_00480 PF00152 tRNA synthetases class II (D, K and N) HRD70_00490 PF17768 RecJ OB domain HRD70_00490 PF02272 DHHA1 domain HRD70_00490 PF01368 DHH family HRD70_00495 PF13098 Thioredoxin-like domain HRD70_00495 PF10411 Disulfide bond isomerase protein N-terminus HRD70_00500 PF00589 Phage integrase family HRD70_00500 PF02899 Phage integrase, N-terminal SAM-like domain HRD70_00505 PF00258 Flavodoxin HRD70_00510 PF06123 Inner membrane protein CreD HRD70_00515 PF00512 His Kinase A (phospho-acceptor) domain HRD70_00515 PF00672 HAMP domain HRD70_00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_00520 PF00072 Response regulator receiver domain HRD70_00520 PF00486 Transcriptional regulatory protein, C terminal HRD70_00525 PF07254 Membrane-bound toxin component of toxin-antitoxin system HRD70_00530 PF03937 Flavinator of succinate dehydrogenase HRD70_00535 PF01571 Aminomethyltransferase folate-binding domain HRD70_00540 PF03006 Haemolysin-III related HRD70_00560 PF02347 Glycine cleavage system P-protein HRD70_00565 PF01597 Glycine cleavage H-protein HRD70_00570 PF01571 Aminomethyltransferase folate-binding domain HRD70_00570 PF08669 Glycine cleavage T-protein C-terminal barrel domain HRD70_00575 PF01494 FAD binding domain HRD70_00580 PF01494 FAD binding domain HRD70_00585 PF00557 Metallopeptidase family M24 HRD70_00585 PF05195 Aminopeptidase P, N-terminal domain HRD70_00590 PF03695 Uncharacterised protein family (UPF0149) HRD70_00595 PF05164 Cell division protein ZapA HRD70_00605 PF01812 5-formyltetrahydrofolate cyclo-ligase family HRD70_00610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRD70_00610 PF01842 ACT domain HRD70_00610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRD70_00615 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HRD70_00620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_00620 PF03466 LysR substrate binding domain HRD70_00625 PF04402 Protein of unknown function (DUF541) HRD70_00630 PF01810 LysE type translocator HRD70_00635 PF00924 Mechanosensitive ion channel HRD70_00635 PF05552 Conserved TM helix HRD70_00640 PF01116 Fructose-bisphosphate aldolase class-II HRD70_00645 PF00162 Phosphoglycerate kinase HRD70_00650 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HRD70_00650 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HRD70_00655 PF00456 Transketolase, thiamine diphosphate binding domain HRD70_00655 PF02780 Transketolase, C-terminal domain HRD70_00655 PF02779 Transketolase, pyrimidine binding domain HRD70_00660 PF01435 Peptidase family M48 HRD70_00665 PF00355 Rieske [2Fe-2S] domain HRD70_00670 PF17810 Arginine decarboxylase helical bundle domain HRD70_00670 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HRD70_00670 PF17944 Arginine decarboxylase C-terminal helical extension HRD70_00675 PF00438 S-adenosylmethionine synthetase, N-terminal domain HRD70_00675 PF02772 S-adenosylmethionine synthetase, central domain HRD70_00675 PF02773 S-adenosylmethionine synthetase, C-terminal domain HRD70_00685 PF04143 Sulphur transport HRD70_00695 PF17283 SprT-like zinc ribbon domain HRD70_00695 PF10263 SprT-like family HRD70_00700 PF04231 Endonuclease I HRD70_00705 PF04452 RNA methyltransferase HRD70_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HRD70_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HRD70_00715 PF02622 Uncharacterized ACR, COG1678 HRD70_00720 PF03652 Holliday junction resolvase HRD70_00725 PF00795 Carbon-nitrogen hydrolase HRD70_00730 PF04371 Porphyromonas-type peptidyl-arginine deiminase HRD70_00735 PF00437 Type II/IV secretion system protein HRD70_00740 PF01168 Alanine racemase, N-terminal domain HRD70_00745 PF14748 Pyrroline-5-carboxylate reductase dimerisation HRD70_00745 PF03807 NADP oxidoreductase coenzyme F420-dependent HRD70_00750 PF02325 YGGT family HRD70_00755 PF02594 Uncharacterised ACR, YggU family COG1872 HRD70_00760 PF01725 Ham1 family HRD70_00765 PF04055 Radical SAM superfamily HRD70_00765 PF06969 HemN C-terminal domain HRD70_00770 PF11101 Protein of unknown function (DUF2884) HRD70_00775 PF04960 Glutaminase HRD70_00780 PF04320 Protein with unknown function (DUF469) HRD70_00785 PF02390 Putative methyltransferase HRD70_00790 PF00633 Helix-hairpin-helix motif HRD70_00790 PF14815 NUDIX domain HRD70_00790 PF10576 Iron-sulfur binding domain of endonuclease III HRD70_00790 PF00730 HhH-GPD superfamily base excision DNA repair protein HRD70_00795 PF04362 Bacterial Fe(2+) trafficking HRD70_00800 PF01464 Transglycosylase SLT domain HRD70_00800 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HRD70_00810 PF01276 Orn/Lys/Arg decarboxylase, major domain HRD70_00810 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HRD70_00810 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HRD70_00820 PF01228 Glycine radical HRD70_00820 PF02901 Pyruvate formate lyase-like HRD70_00825 PF00871 Acetokinase family HRD70_00830 PF01490 Transmembrane amino acid transporter protein HRD70_00835 PF00291 Pyridoxal-phosphate dependent enzyme HRD70_00855 PF04041 beta-1,4-mannooligosaccharide phosphorylase HRD70_00860 PF16657 Maltogenic Amylase, C-terminal domain HRD70_00860 PF00128 Alpha amylase, catalytic domain HRD70_00865 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_00870 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_00880 PF00356 Bacterial regulatory proteins, lacI family HRD70_00885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRD70_00885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRD70_00885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRD70_00885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRD70_00890 PF00005 ABC transporter HRD70_00890 PF08402 TOBE domain HRD70_00975 PF00182 Chitinase class I HRD70_00985 PF10431 C-terminal, D2-small domain, of ClpB protein HRD70_00985 PF17871 AAA lid domain HRD70_00985 PF07724 AAA domain (Cdc48 subfamily) HRD70_00985 PF00004 ATPase family associated with various cellular activities (AAA) HRD70_00995 PF00691 OmpA family HRD70_00995 PF13488 Glycine zipper HRD70_01020 PF02311 AraC-like ligand binding domain HRD70_01020 PF12833 Helix-turn-helix domain HRD70_01025 PF08502 LeuA allosteric (dimerisation) domain HRD70_01025 PF00682 HMGL-like HRD70_01040 PF04632 Fusaric acid resistance protein family HRD70_01045 PF00529 HlyD membrane-fusion protein of T1SS HRD70_01045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRD70_01065 PF00557 Metallopeptidase family M24 HRD70_01070 PF00005 ABC transporter HRD70_01075 PF01032 FecCD transport family HRD70_01080 PF01032 FecCD transport family HRD70_01085 PF01497 Periplasmic binding protein HRD70_01100 PF00083 Sugar (and other) transporter HRD70_01100 PF07690 Major Facilitator Superfamily HRD70_01105 PF00356 Bacterial regulatory proteins, lacI family HRD70_01110 PF01156 Inosine-uridine preferring nucleoside hydrolase HRD70_01115 PF02690 Na+/Pi-cotransporter HRD70_01120 PF01546 Peptidase family M20/M25/M40 HRD70_01120 PF07687 Peptidase dimerisation domain HRD70_01125 PF03806 AbgT putative transporter family HRD70_01130 PF03797 Autotransporter beta-domain HRD70_01140 PF00891 O-methyltransferase domain HRD70_01145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRD70_01145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRD70_01145 PF00205 Thiamine pyrophosphate enzyme, central domain HRD70_01155 PF08946 Osmosensory transporter coiled coil HRD70_01155 PF00083 Sugar (and other) transporter HRD70_01160 PF00873 AcrB/AcrD/AcrF family HRD70_01165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRD70_01170 PF00563 EAL domain HRD70_01170 PF08448 PAS fold HRD70_01170 PF08447 PAS fold HRD70_01170 PF00990 Diguanylate cyclase, GGDEF domain HRD70_01180 PF02110 Hydroxyethylthiazole kinase family HRD70_01185 PF07503 HypF finger HRD70_01185 PF00708 Acylphosphatase HRD70_01185 PF01300 Telomere recombination HRD70_01185 PF17788 HypF Kae1-like domain HRD70_01190 PF00586 AIR synthase related protein, N-terminal domain HRD70_01190 PF02769 AIR synthase related protein, C-terminal domain HRD70_01195 PF01924 Hydrogenase formation hypA family HRD70_01200 PF01455 HupF/HypC family HRD70_01205 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRD70_01210 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HRD70_01215 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE HRD70_01220 PF01750 Hydrogenase maturation protease HRD70_01225 PF00374 Nickel-dependent hydrogenase HRD70_01230 PF03916 Polysulphide reductase, NrfD HRD70_01235 PF13247 4Fe-4S dicluster domain HRD70_01240 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HRD70_01240 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HRD70_01245 PF05433 Glycine zipper 2TM domain HRD70_01250 PF13677 Membrane MotB of proton-channel complex MotA/MotB HRD70_01250 PF00691 OmpA family HRD70_01265 PF01370 NAD dependent epimerase/dehydratase family HRD70_01270 PF07690 Major Facilitator Superfamily HRD70_01280 PF00550 Phosphopantetheine attachment site HRD70_01280 PF00857 Isochorismatase family HRD70_01285 PF13193 AMP-binding enzyme C-terminal domain HRD70_01285 PF00501 AMP-binding enzyme HRD70_01290 PF00425 chorismate binding enzyme HRD70_01295 PF01497 Periplasmic binding protein HRD70_01305 PF00005 ABC transporter HRD70_01310 PF01032 FecCD transport family HRD70_01315 PF01032 FecCD transport family HRD70_01320 PF05977 Transmembrane secretion effector HRD70_01325 PF00975 Thioesterase domain HRD70_01325 PF00501 AMP-binding enzyme HRD70_01325 PF13193 AMP-binding enzyme C-terminal domain HRD70_01325 PF00668 Condensation domain HRD70_01325 PF00550 Phosphopantetheine attachment site HRD70_01330 PF03621 MbtH-like protein HRD70_01335 PF00756 Putative esterase HRD70_01335 PF11806 Domain of unknown function (DUF3327) HRD70_01340 PF00593 TonB dependent receptor HRD70_01340 PF07715 TonB-dependent Receptor Plug Domain HRD70_01360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRD70_01360 PF00529 HlyD membrane-fusion protein of T1SS HRD70_01365 PF00873 AcrB/AcrD/AcrF family HRD70_01370 PF13532 2OG-Fe(II) oxygenase superfamily HRD70_01395 PF00263 Bacterial type II and III secretion system protein HRD70_01395 PF13629 Pilus formation protein N terminal region HRD70_01395 PF04972 BON domain HRD70_01410 PF00437 Type II/IV secretion system protein HRD70_01445 PF02472 Biopolymer transport protein ExbD/TolR HRD70_01450 PF01618 MotA/TolQ/ExbB proton channel family HRD70_01455 PF01053 Cys/Met metabolism PLP-dependent enzyme HRD70_01460 PF09335 SNARE associated Golgi protein HRD70_01465 PF06719 AraC-type transcriptional regulator N-terminus HRD70_01465 PF12833 Helix-turn-helix domain HRD70_01470 PF00465 Iron-containing alcohol dehydrogenase HRD70_01475 PF00248 Aldo/keto reductase family HRD70_01480 PF11842 Domain of unknown function (DUF3362) HRD70_01480 PF04055 Radical SAM superfamily HRD70_01480 PF08497 Radical SAM N-terminal HRD70_01485 PF07731 Multicopper oxidase HRD70_01485 PF07732 Multicopper oxidase HRD70_01490 PF01553 Acyltransferase HRD70_01495 PF00521 DNA gyrase/topoisomerase IV, subunit A HRD70_01495 PF03989 DNA gyrase C-terminal domain, beta-propeller HRD70_01500 PF03830 PTS system sorbose subfamily IIB component HRD70_01505 PF03609 PTS system sorbose-specific iic component HRD70_01510 PF03613 PTS system mannose/fructose/sorbose family IID component HRD70_01520 PF01547 Bacterial extracellular solute-binding protein HRD70_01525 PF00672 HAMP domain HRD70_01525 PF00512 His Kinase A (phospho-acceptor) domain HRD70_01525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_01530 PF00486 Transcriptional regulatory protein, C terminal HRD70_01530 PF00072 Response regulator receiver domain HRD70_01535 PF02525 Flavodoxin-like fold HRD70_01540 PF03992 Antibiotic biosynthesis monooxygenase HRD70_01545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_01545 PF03466 LysR substrate binding domain HRD70_01550 PF01751 Toprim domain HRD70_01550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_01550 PF00986 DNA gyrase B subunit, carboxyl terminus HRD70_01550 PF00204 DNA gyrase B HRD70_01555 PF05728 Uncharacterised protein family (UPF0227) HRD70_01560 PF00149 Calcineurin-like phosphoesterase HRD70_01565 PF06853 Protein of unknown function (DUF1249) HRD70_01570 PF00293 NUDIX domain HRD70_01575 PF02321 Outer membrane efflux protein HRD70_01580 PF06693 Protein of unknown function (DUF1190) HRD70_01585 PF03738 Glutathionylspermidine synthase preATP-grasp HRD70_01590 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HRD70_01595 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HRD70_01600 PF04380 Membrane fusogenic activity HRD70_01605 PF13520 Amino acid permease HRD70_01610 PF01467 Cytidylyltransferase-like HRD70_01610 PF00294 pfkB family carbohydrate kinase HRD70_01615 PF03710 Glutamate-ammonia ligase adenylyltransferase HRD70_01615 PF08335 GlnD PII-uridylyltransferase HRD70_01620 PF01928 CYTH domain HRD70_01625 PF08239 Bacterial SH3 domain HRD70_01630 PF12627 Probable RNA and SrmB- binding site of polymerase A HRD70_01630 PF01743 Poly A polymerase head domain HRD70_01630 PF01966 HD domain HRD70_01635 PF02673 Bacitracin resistance protein BacA HRD70_01640 PF02152 Dihydroneopterin aldolase HRD70_01645 PF02660 Glycerol-3-phosphate acyltransferase HRD70_01650 PF00814 Glycoprotease family HRD70_01655 PF01165 Ribosomal protein S21 HRD70_01660 PF10410 DnaB-helicase binding domain of primase HRD70_01660 PF08278 DNA primase DnaG DnaB-binding HRD70_01660 PF01807 CHC2 zinc finger HRD70_01660 PF08275 DNA primase catalytic core, N-terminal domain HRD70_01665 PF04545 Sigma-70, region 4 HRD70_01665 PF04539 Sigma-70 region 3 HRD70_01665 PF04542 Sigma-70 region 2 HRD70_01665 PF00140 Sigma-70 factor, region 1.2 HRD70_01665 PF03979 Sigma-70 factor, region 1.1 HRD70_01665 PF04546 Sigma-70, non-essential region HRD70_01680 PF02016 LD-carboxypeptidase N-terminal domain HRD70_01680 PF17676 LD-carboxypeptidase C-terminal domain HRD70_01685 PF07075 Protein of unknown function (DUF1343) HRD70_01695 PF01915 Glycosyl hydrolase family 3 C-terminal domain HRD70_01695 PF00933 Glycosyl hydrolase family 3 N terminal domain HRD70_01700 PF01380 SIS domain HRD70_01700 PF01418 Helix-turn-helix domain, rpiR family HRD70_01705 PF13580 SIS domain HRD70_01710 PF02378 Phosphotransferase system, EIIC HRD70_01710 PF00367 phosphotransferase system, EIIB HRD70_01715 PF04960 Glutaminase HRD70_01720 PF13520 Amino acid permease HRD70_01725 PF00282 Pyridoxal-dependent decarboxylase conserved domain HRD70_01730 PF01638 HxlR-like helix-turn-helix HRD70_01735 PF07690 Major Facilitator Superfamily HRD70_01740 PF03729 Short repeat of unknown function (DUF308) HRD70_01745 PF00892 EamA-like transporter family HRD70_01755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HRD70_01755 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRD70_01760 PF05175 Methyltransferase small domain HRD70_01765 PF03797 Autotransporter beta-domain HRD70_01770 PF01863 Protein of unknown function DUF45 HRD70_01775 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HRD70_01780 PF03741 Integral membrane protein TerC family HRD70_01785 PF00375 Sodium:dicarboxylate symporter family HRD70_01790 PF10688 Bacterial inner membrane protein HRD70_01795 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HRD70_01795 PF08666 SAF domain HRD70_01800 PF01232 Mannitol dehydrogenase Rossmann domain HRD70_01800 PF08125 Mannitol dehydrogenase C-terminal domain HRD70_01805 PF02614 Glucuronate isomerase HRD70_01810 PF07690 Major Facilitator Superfamily HRD70_01815 PF00392 Bacterial regulatory proteins, gntR family HRD70_01815 PF07729 FCD domain HRD70_01825 PF09335 SNARE associated Golgi protein HRD70_01830 PF13721 SecD export protein N-terminal TM region HRD70_01840 PF05957 Bacterial protein of unknown function (DUF883) HRD70_01845 PF07332 Putative Actinobacterial Holin-X, holin superfamily III HRD70_01850 PF13997 YqjK-like protein HRD70_01855 PF07681 DoxX HRD70_01860 PF13409 Glutathione S-transferase, N-terminal domain HRD70_01865 PF03466 LysR substrate binding domain HRD70_01865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_01870 PF17954 Quercetinase C-terminal cupin domain HRD70_01870 PF02678 Pirin HRD70_01875 PF08240 Alcohol dehydrogenase GroES-like domain HRD70_01875 PF00107 Zinc-binding dehydrogenase HRD70_01880 PF00106 short chain dehydrogenase HRD70_01890 PF00248 Aldo/keto reductase family HRD70_01895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_01895 PF03466 LysR substrate binding domain HRD70_01915 PF13599 Pentapeptide repeats (9 copies) HRD70_01930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRD70_01935 PF04348 LppC putative lipoprotein HRD70_01940 PF02021 Uncharacterised protein family UPF0102 HRD70_01945 PF13580 SIS domain HRD70_01950 PF04972 BON domain HRD70_01955 PF00912 Transglycosylase HRD70_01965 PF01627 Hpt domain HRD70_01965 PF00989 PAS fold HRD70_01965 PF00072 Response regulator receiver domain HRD70_01965 PF00512 His Kinase A (phospho-acceptor) domain HRD70_01965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_01965 PF18415 Histidine kinase receptor ArcB trans-membrane domain HRD70_01970 PF04055 Radical SAM superfamily HRD70_01970 PF16199 Radical_SAM C-terminal domain HRD70_01975 PF00310 Glutamine amidotransferases class-II HRD70_01975 PF04898 Glutamate synthase central domain HRD70_01975 PF01645 Conserved region in glutamate synthase HRD70_01975 PF01493 GXGXG motif HRD70_01980 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRD70_01980 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HRD70_01990 PF04386 Stringent starvation protein B HRD70_01995 PF00043 Glutathione S-transferase, C-terminal domain HRD70_01995 PF02798 Glutathione S-transferase, N-terminal domain HRD70_02000 PF00380 Ribosomal protein S9/S16 HRD70_02005 PF00572 Ribosomal protein L13 HRD70_02010 PF03969 AFG1-like ATPase HRD70_02015 PF06295 Protein of unknown function (DUF1043) HRD70_02020 PF13180 PDZ domain HRD70_02020 PF00595 PDZ domain HRD70_02025 PF13180 PDZ domain HRD70_02030 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HRD70_02035 PF01722 BolA-like protein HRD70_02040 PF13466 STAS domain HRD70_02045 PF05494 MlaC protein HRD70_02050 PF02470 MlaD protein HRD70_02055 PF02405 Permease MlaE HRD70_02060 PF00005 ABC transporter HRD70_02065 PF01699 Sodium/calcium exchanger protein HRD70_02070 PF00571 CBS domain HRD70_02070 PF01380 SIS domain HRD70_02080 PF06835 Lipopolysaccharide-assembly, LptC-related HRD70_02085 PF03968 OstA-like protein HRD70_02090 PF00005 ABC transporter HRD70_02090 PF12399 Branched-chain amino acid ATP-binding cassette transporter HRD70_02095 PF04963 Sigma-54 factor, core binding domain HRD70_02095 PF00309 Sigma-54 factor, Activator interacting domain (AID) HRD70_02095 PF04552 Sigma-54, DNA binding domain HRD70_02100 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HRD70_02105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HRD70_02110 PF03668 P-loop ATPase protein family HRD70_02115 PF00381 PTS HPr component phosphorylation site HRD70_02120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRD70_02120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRD70_02125 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HRD70_02125 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HRD70_02130 PF01042 Endoribonuclease L-PSP HRD70_02135 PF00128 Alpha amylase, catalytic domain HRD70_02135 PF11941 Domain of unknown function (DUF3459) HRD70_02140 PF00367 phosphotransferase system, EIIB HRD70_02140 PF02378 Phosphotransferase system, EIIC HRD70_02145 PF00356 Bacterial regulatory proteins, lacI family HRD70_02150 PF00690 Cation transporter/ATPase, N-terminus HRD70_02150 PF00689 Cation transporting ATPase, C-terminus HRD70_02155 PF08279 HTH domain HRD70_02155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HRD70_02155 PF05043 Mga helix-turn-helix domain HRD70_02155 PF00874 PRD domain HRD70_02160 PF10282 Lactonase, 7-bladed beta-propeller HRD70_02165 PF07071 KDGP aldolase HRD70_02170 PF03841 L-seryl-tRNA selenium transferase HRD70_02175 PF01979 Amidohydrolase family HRD70_02205 PF01272 Transcription elongation factor, GreA/GreB, C-term HRD70_02205 PF14760 Rnk N-terminus HRD70_02210 PF07361 Cytochrome b562 HRD70_02215 PF01523 Putative modulator of DNA gyrase HRD70_02220 PF04751 Protein of unknown function (DUF615) HRD70_02225 PF01337 Barstar (barnase inhibitor) HRD70_02235 PF00171 Aldehyde dehydrogenase family HRD70_02240 PF04632 Fusaric acid resistance protein family HRD70_02245 PF13533 Biotin-lipoyl like HRD70_02250 PF07869 Protein of unknown function (DUF1656) HRD70_02255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_02255 PF03466 LysR substrate binding domain HRD70_02260 PF01523 Putative modulator of DNA gyrase HRD70_02265 PF00795 Carbon-nitrogen hydrolase HRD70_02270 PF13116 Protein of unknown function HRD70_02270 PF13502 AsmA-like C-terminal region HRD70_02275 PF10150 Ribonuclease E/G family HRD70_02275 PF00575 S1 RNA binding domain HRD70_02280 PF02545 Maf-like protein HRD70_02285 PF04093 rod shape-determining protein MreD HRD70_02290 PF04085 rod shape-determining protein MreC HRD70_02300 PF00990 Diguanylate cyclase, GGDEF domain HRD70_02300 PF00563 EAL domain HRD70_02300 PF17157 Gammaproteobacterial periplasmic sensor domain HRD70_02305 PF08240 Alcohol dehydrogenase GroES-like domain HRD70_02305 PF00107 Zinc-binding dehydrogenase HRD70_02310 PF00174 Oxidoreductase molybdopterin binding domain HRD70_02315 PF01794 Ferric reductase like transmembrane component HRD70_02320 PF01220 Dehydroquinase class II HRD70_02325 PF00364 Biotin-requiring enzyme HRD70_02330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HRD70_02330 PF00289 Biotin carboxylase, N-terminal domain HRD70_02330 PF02785 Biotin carboxylase C-terminal domain HRD70_02335 PF06196 Protein of unknown function (DUF997) HRD70_02340 PF00474 Sodium:solute symporter family HRD70_02350 PF01207 Dihydrouridine synthase (Dus) HRD70_02355 PF02954 Bacterial regulatory protein, Fis family HRD70_02365 PF00990 Diguanylate cyclase, GGDEF domain HRD70_02365 PF08448 PAS fold HRD70_02370 PF05433 Glycine zipper 2TM domain HRD70_02375 PF00313 'Cold-shock' DNA-binding domain HRD70_02380 PF00313 'Cold-shock' DNA-binding domain HRD70_02385 PF00313 'Cold-shock' DNA-binding domain HRD70_02390 PF00939 Sodium:sulfate symporter transmembrane region HRD70_02395 PF03279 Bacterial lipid A biosynthesis acyltransferase HRD70_02410 PF03788 LrgA family HRD70_02415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_02415 PF03466 LysR substrate binding domain HRD70_02420 PF00999 Sodium/hydrogen exchanger family HRD70_02425 PF00860 Permease family HRD70_02435 PF00436 Single-strand binding protein family HRD70_02440 PF17760 UvrA interaction domain HRD70_02440 PF17755 UvrA DNA-binding domain HRD70_02440 PF00005 ABC transporter HRD70_02445 PF04237 YjbR HRD70_02450 PF00155 Aminotransferase class I and II HRD70_02455 PF00842 Alanine racemase, C-terminal domain HRD70_02455 PF01168 Alanine racemase, N-terminal domain HRD70_02460 PF03796 DnaB-like helicase C terminal domain HRD70_02460 PF00772 DnaB-like helicase N terminal domain HRD70_02465 PF08240 Alcohol dehydrogenase GroES-like domain HRD70_02465 PF00107 Zinc-binding dehydrogenase HRD70_02470 PF09583 Phage shock protein G (Phageshock_PspG) HRD70_02475 PF01207 Dihydrouridine synthase (Dus) HRD70_02480 PF01475 Ferric uptake regulator family HRD70_02485 PF05532 CsbD-like HRD70_02490 PF00717 Peptidase S24-like HRD70_02490 PF01726 LexA DNA binding domain HRD70_02495 PF01219 Prokaryotic diacylglycerol kinase HRD70_02500 PF01553 Acyltransferase HRD70_02505 PF01040 UbiA prenyltransferase family HRD70_02510 PF04345 Chorismate lyase HRD70_02520 PF07148 Maltose operon periplasmic protein precursor (MalM) HRD70_02525 PF02264 LamB porin HRD70_02530 PF00005 ABC transporter HRD70_02530 PF17912 MalK OB fold domain HRD70_02535 PF01547 Bacterial extracellular solute-binding protein HRD70_02540 PF14785 Maltose transport system permease protein MalF P2 domain HRD70_02540 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_02545 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_02550 PF06146 Phosphate-starvation-inducible E HRD70_02555 PF00342 Phosphoglucose isomerase HRD70_02560 PF01842 ACT domain HRD70_02560 PF00696 Amino acid kinase family HRD70_02565 PF01758 Sodium Bile acid symporter family HRD70_02570 PF08479 POTRA domain, ShlB-type HRD70_02570 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HRD70_02570 PF17287 POTRA domain HRD70_02575 PF05860 haemagglutination activity domain HRD70_02575 PF13332 Hemagglutinin repeat HRD70_02580 PF02310 B12 binding domain HRD70_02580 PF02607 B12 binding domain HRD70_02580 PF02965 Vitamin B12 dependent methionine synthase, activation domain HRD70_02580 PF00809 Pterin binding enzyme HRD70_02580 PF02574 Homocysteine S-methyltransferase HRD70_02585 PF01614 Bacterial transcriptional regulator HRD70_02585 PF09339 IclR helix-turn-helix domain HRD70_02590 PF00512 His Kinase A (phospho-acceptor) domain HRD70_02590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_02590 PF00989 PAS fold HRD70_02595 PF02954 Bacterial regulatory protein, Fis family HRD70_02595 PF00072 Response regulator receiver domain HRD70_02595 PF00158 Sigma-54 interaction domain HRD70_02600 PF01144 Coenzyme A transferase HRD70_02605 PF01144 Coenzyme A transferase HRD70_02610 PF02667 Short chain fatty acid transporter HRD70_02615 PF00108 Thiolase, N-terminal domain HRD70_02615 PF02803 Thiolase, C-terminal domain HRD70_02620 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) HRD70_02625 PF00463 Isocitrate lyase family HRD70_02630 PF01274 Malate synthase HRD70_02635 PF04204 Homoserine O-succinyltransferase HRD70_02680 PF02142 MGS-like domain HRD70_02680 PF01808 AICARFT/IMPCHase bienzyme HRD70_02685 PF02843 Phosphoribosylglycinamide synthetase, C domain HRD70_02685 PF02844 Phosphoribosylglycinamide synthetase, N domain HRD70_02685 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HRD70_02690 PF07356 Protein of unknown function (DUF1481) HRD70_02695 PF00216 Bacterial DNA-binding protein HRD70_02700 PF04222 Protein of unknown function (DUF416) HRD70_02705 PF04493 Endonuclease V HRD70_02710 PF01208 Uroporphyrinogen decarboxylase (URO-D) HRD70_02715 PF09297 NADH pyrophosphatase zinc ribbon domain HRD70_02715 PF00293 NUDIX domain HRD70_02720 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HRD70_02725 PF13667 ThiC-associated domain HRD70_02725 PF01964 Radical SAM ThiC family HRD70_02730 PF02581 Thiamine monophosphate synthase HRD70_02735 PF00899 ThiF family HRD70_02740 PF02597 ThiS family HRD70_02745 PF05690 Thiazole biosynthesis protein ThiG HRD70_02750 PF06968 Biotin and Thiamin Synthesis associated domain HRD70_02750 PF04055 Radical SAM superfamily HRD70_02755 PF04997 RNA polymerase Rpb1, domain 1 HRD70_02755 PF00623 RNA polymerase Rpb1, domain 2 HRD70_02755 PF04983 RNA polymerase Rpb1, domain 3 HRD70_02755 PF05000 RNA polymerase Rpb1, domain 4 HRD70_02755 PF04998 RNA polymerase Rpb1, domain 5 HRD70_02760 PF00562 RNA polymerase Rpb2, domain 6 HRD70_02760 PF10385 RNA polymerase beta subunit external 1 domain HRD70_02760 PF04565 RNA polymerase Rpb2, domain 3 HRD70_02760 PF04563 RNA polymerase beta subunit HRD70_02760 PF04561 RNA polymerase Rpb2, domain 2 HRD70_02760 PF04560 RNA polymerase Rpb2, domain 7 HRD70_02765 PF16320 Ribosomal protein L7/L12 dimerisation domain HRD70_02765 PF00542 Ribosomal protein L7/L12 C-terminal domain HRD70_02770 PF00466 Ribosomal protein L10 HRD70_02775 PF00687 Ribosomal protein L1p/L10e family HRD70_02780 PF00298 Ribosomal protein L11, RNA binding domain HRD70_02780 PF03946 Ribosomal protein L11, N-terminal domain HRD70_02785 PF02357 Transcription termination factor nusG HRD70_02785 PF00467 KOW motif HRD70_02790 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HRD70_02795 PF03143 Elongation factor Tu C-terminal domain HRD70_02795 PF03144 Elongation factor Tu domain 2 HRD70_02795 PF00009 Elongation factor Tu GTP binding domain HRD70_02825 PF13673 Acetyltransferase (GNAT) domain HRD70_02830 PF00485 Phosphoribulokinase / Uridine kinase family HRD70_02835 PF02237 Biotin protein ligase C terminal domain HRD70_02835 PF03099 Biotin/lipoate A/B protein ligase family HRD70_02835 PF08279 HTH domain HRD70_02840 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HRD70_02840 PF01565 FAD binding domain HRD70_02870 PF00132 Bacterial transferase hexapeptide (six repeats) HRD70_02875 PF08501 Shikimate dehydrogenase substrate binding domain HRD70_02875 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HRD70_02875 PF01488 Shikimate / quinate 5-dehydrogenase HRD70_02880 PF01300 Telomere recombination HRD70_02885 PF01396 Topoisomerase DNA binding C4 zinc finger HRD70_02890 PF04361 Protein of unknown function (DUF494) HRD70_02895 PF02481 DNA recombination-mediator protein A HRD70_02895 PF17782 DprA winged helix domain HRD70_02900 PF01327 Polypeptide deformylase HRD70_02905 PF00551 Formyl transferase HRD70_02905 PF02911 Formyl transferase, C-terminal domain HRD70_02910 PF01189 16S rRNA methyltransferase RsmB/F HRD70_02910 PF01029 NusB family HRD70_02915 PF02254 TrkA-N domain HRD70_02915 PF02080 TrkA-C domain HRD70_02920 PF01741 Large-conductance mechanosensitive channel, MscL HRD70_02925 PF03889 Alternative ribosome-rescue factor A HRD70_02930 PF13411 MerR HTH family regulatory protein HRD70_02935 PF09350 Domain of unknown function (DUF1992) HRD70_02940 PF01196 Ribosomal protein L17 HRD70_02945 PF01000 RNA polymerase Rpb3/RpoA insert domain HRD70_02945 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HRD70_02945 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HRD70_02950 PF01479 S4 domain HRD70_02950 PF00163 Ribosomal protein S4/S9 N-terminal domain HRD70_02955 PF00411 Ribosomal protein S11 HRD70_02960 PF00416 Ribosomal protein S13/S18 HRD70_02965 PF00444 Ribosomal protein L36 HRD70_02970 PF00344 SecY translocase HRD70_02975 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HRD70_02980 PF00327 Ribosomal protein L30p/L7e HRD70_02985 PF03719 Ribosomal protein S5, C-terminal domain HRD70_02985 PF00333 Ribosomal protein S5, N-terminal domain HRD70_02990 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HRD70_02995 PF00347 Ribosomal protein L6 HRD70_03000 PF00410 Ribosomal protein S8 HRD70_03005 PF00253 Ribosomal protein S14p/S29e HRD70_03010 PF00281 Ribosomal protein L5 HRD70_03010 PF00673 ribosomal L5P family C-terminus HRD70_03015 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HRD70_03015 PF00467 KOW motif HRD70_03020 PF00238 Ribosomal protein L14p/L23e HRD70_03025 PF00366 Ribosomal protein S17 HRD70_03030 PF00831 Ribosomal L29 protein HRD70_03035 PF00252 Ribosomal protein L16p/L10e HRD70_03040 PF07650 KH domain HRD70_03040 PF00189 Ribosomal protein S3, C-terminal domain HRD70_03045 PF00237 Ribosomal protein L22p/L17e HRD70_03050 PF00203 Ribosomal protein S19 HRD70_03055 PF00181 Ribosomal Proteins L2, RNA binding domain HRD70_03055 PF03947 Ribosomal Proteins L2, C-terminal domain HRD70_03060 PF00276 Ribosomal protein L23 HRD70_03065 PF00573 Ribosomal protein L4/L1 family HRD70_03070 PF00297 Ribosomal protein L3 HRD70_03075 PF00338 Ribosomal protein S10p/S20e HRD70_03080 PF00210 Ferritin-like domain HRD70_03085 PF04324 BFD-like [2Fe-2S] binding domain HRD70_03090 PF03144 Elongation factor Tu domain 2 HRD70_03090 PF00009 Elongation factor Tu GTP binding domain HRD70_03090 PF03143 Elongation factor Tu C-terminal domain HRD70_03095 PF00679 Elongation factor G C-terminus HRD70_03095 PF03144 Elongation factor Tu domain 2 HRD70_03095 PF14492 Elongation Factor G, domain II HRD70_03095 PF00009 Elongation factor Tu GTP binding domain HRD70_03095 PF03764 Elongation factor G, domain IV HRD70_03100 PF00177 Ribosomal protein S7p/S5e HRD70_03105 PF00164 Ribosomal protein S12/S23 HRD70_03110 PF04077 DsrH like protein HRD70_03115 PF02635 DsrE/DsrF-like family HRD70_03120 PF02635 DsrE/DsrF-like family HRD70_03125 PF13309 HTH domain HRD70_03125 PF08348 YheO-like PAS domain HRD70_03135 PF04102 SlyX HRD70_03140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRD70_03145 PF09526 Probable metal-binding protein (DUF2387) HRD70_03150 PF00999 Sodium/hydrogen exchanger family HRD70_03150 PF02254 TrkA-N domain HRD70_03155 PF02525 Flavodoxin-like fold HRD70_03160 PF00005 ABC transporter HRD70_03160 PF12848 ABC transporter HRD70_03170 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HRD70_03175 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_03180 PF00005 ABC transporter HRD70_03185 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HRD70_03190 PF02567 Phenazine biosynthesis-like protein HRD70_03195 PF01810 LysE type translocator HRD70_03200 PF00561 alpha/beta hydrolase fold HRD70_03205 PF06794 Uncharacterised protein family (UPF0270) HRD70_03210 PF00485 Phosphoribulokinase / Uridine kinase family HRD70_03215 PF02566 OsmC-like protein HRD70_03220 PF13545 Crp-like helix-turn-helix domain HRD70_03220 PF00027 Cyclic nucleotide-binding domain HRD70_03225 PF12805 FUSC-like inner membrane protein yccS HRD70_03230 PF00202 Aminotransferase class-III HRD70_03235 PF00117 Glutamine amidotransferase class-I HRD70_03245 PF05872 Bacterial protein of unknown function (DUF853) HRD70_03250 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HRD70_03255 PF11975 Family 4 glycosyl hydrolase C-terminal domain HRD70_03255 PF02056 Family 4 glycosyl hydrolase HRD70_03260 PF00356 Bacterial regulatory proteins, lacI family HRD70_03265 PF07690 Major Facilitator Superfamily HRD70_03270 PF07969 Amidohydrolase family HRD70_03275 PF04324 BFD-like [2Fe-2S] binding domain HRD70_03275 PF18267 Rubredoxin NAD+ reductase C-terminal domain HRD70_03275 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HRD70_03275 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRD70_03275 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HRD70_03280 PF13806 Rieske-like [2Fe-2S] domain HRD70_03285 PF01226 Formate/nitrite transporter HRD70_03290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRD70_03290 PF10414 Sirohaem synthase dimerisation region HRD70_03290 PF14824 Sirohaem biosynthesis protein central HRD70_03295 PF00579 tRNA synthetases class I (W and Y) HRD70_03300 PF13419 Haloacid dehalogenase-like hydrolase HRD70_03305 PF00834 Ribulose-phosphate 3 epimerase family HRD70_03310 PF02086 D12 class N6 adenine-specific DNA methyltransferase HRD70_03315 PF05036 Sporulation related domain HRD70_03320 PF01761 3-dehydroquinate synthase HRD70_03325 PF01202 Shikimate kinase HRD70_03355 PF00905 Penicillin binding protein transpeptidase domain HRD70_03355 PF00912 Transglycosylase HRD70_03355 PF17092 Penicillin-binding protein OB-like domain HRD70_03360 PF00293 NUDIX domain HRD70_03365 PF07095 Intracellular growth attenuator protein IgaA HRD70_03370 PF13419 Haloacid dehalogenase-like hydrolase HRD70_03375 PF01479 S4 domain HRD70_03380 PF01430 Hsp33 protein HRD70_03385 PF01293 Phosphoenolpyruvate carboxykinase HRD70_03390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_03390 PF00512 His Kinase A (phospho-acceptor) domain HRD70_03390 PF00672 HAMP domain HRD70_03395 PF00486 Transcriptional regulatory protein, C terminal HRD70_03395 PF00072 Response regulator receiver domain HRD70_03400 PF01272 Transcription elongation factor, GreA/GreB, C-term HRD70_03400 PF03449 Transcription elongation factor, N-terminal HRD70_03405 PF09371 Tex-like protein N-terminal domain HRD70_03405 PF16921 Tex protein YqgF-like domain HRD70_03405 PF17674 HHH domain HRD70_03405 PF00575 S1 RNA binding domain HRD70_03410 PF04023 FeoA domain HRD70_03415 PF07670 Nucleoside recognition HRD70_03415 PF02421 Ferrous iron transport protein B HRD70_03415 PF07664 Ferrous iron transport protein B C terminus HRD70_03415 PF17910 FeoB cytosolic helical domain HRD70_03420 PF09012 FeoC like transcriptional regulator HRD70_03425 PF07338 Protein of unknown function (DUF1471) HRD70_03430 PF00561 alpha/beta hydrolase fold HRD70_03435 PF00156 Phosphoribosyl transferase domain HRD70_03440 PF01521 Iron-sulphur cluster biosynthesis HRD70_03440 PF01106 NifU-like domain HRD70_03445 PF02446 4-alpha-glucanotransferase HRD70_03450 PF00343 Carbohydrate phosphorylase HRD70_03455 PF17874 MalT-like TPR region HRD70_03455 PF00196 Bacterial regulatory proteins, luxR family HRD70_03460 PF00581 Rhodanese-like domain HRD70_03465 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HRD70_03465 PF01694 Rhomboid family HRD70_03470 PF00455 DeoR C terminal sensor domain HRD70_03470 PF08220 DeoR-like helix-turn-helix domain HRD70_03475 PF01266 FAD dependent oxidoreductase HRD70_03475 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HRD70_03480 PF00343 Carbohydrate phosphorylase HRD70_03485 PF00534 Glycosyl transferases group 1 HRD70_03485 PF08323 Starch synthase catalytic domain HRD70_03490 PF00483 Nucleotidyl transferase HRD70_03495 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HRD70_03495 PF18390 Glycogen debranching enzyme C-terminal domain HRD70_03495 PF00128 Alpha amylase, catalytic domain HRD70_03500 PF02806 Alpha amylase, C-terminal all-beta domain HRD70_03500 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HRD70_03500 PF00128 Alpha amylase, catalytic domain HRD70_03505 PF07694 5TMR of 5TMR-LYT HRD70_03505 PF06580 Histidine kinase HRD70_03510 PF02774 Semialdehyde dehydrogenase, dimerisation domain HRD70_03510 PF01118 Semialdehyde dehydrogenase, NAD binding domain HRD70_03515 PF01914 MarC family integral membrane protein HRD70_03520 PF01202 Shikimate kinase HRD70_03525 PF02447 GntP family permease HRD70_03530 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HRD70_03530 PF00356 Bacterial regulatory proteins, lacI family HRD70_03535 PF17954 Quercetinase C-terminal cupin domain HRD70_03535 PF02678 Pirin HRD70_03540 PF00583 Acetyltransferase (GNAT) family HRD70_03545 PF01261 Xylose isomerase-like TIM barrel HRD70_03550 PF01261 Xylose isomerase-like TIM barrel HRD70_03555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HRD70_03555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HRD70_03560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRD70_03560 PF00205 Thiamine pyrophosphate enzyme, central domain HRD70_03560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRD70_03565 PF00294 pfkB family carbohydrate kinase HRD70_03575 PF04962 KduI/IolB family HRD70_03580 PF00171 Aldehyde dehydrogenase family HRD70_03590 PF01872 RibD C-terminal domain HRD70_03610 PF01384 Phosphate transporter family HRD70_03615 PF10625 Universal stress protein B (UspB) HRD70_03620 PF00582 Universal stress protein family HRD70_03625 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HRD70_03625 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HRD70_03630 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HRD70_03630 PF00413 Matrixin HRD70_03630 PF08548 Peptidase M10 serralysin C terminal HRD70_03635 PF04445 Putative SAM-dependent methyltransferase HRD70_03640 PF01432 Peptidase family M3 HRD70_03645 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HRD70_03650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRD70_03650 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRD70_03660 PF08671 Anti-repressor SinI HRD70_03660 PF01381 Helix-turn-helix HRD70_03665 PF03631 Virulence factor BrkB HRD70_03670 PF02611 CDP-diacylglycerol pyrophosphatase HRD70_03675 PF05170 AsmA family HRD70_03680 PF00563 EAL domain HRD70_03685 PF01361 Tautomerase enzyme HRD70_03690 PF00294 pfkB family carbohydrate kinase HRD70_03695 PF05193 Peptidase M16 inactive domain HRD70_03695 PF00675 Insulinase (Peptidase family M16) HRD70_03700 PF00375 Sodium:dicarboxylate symporter family HRD70_03705 PF06917 Periplasmic pectate lyase HRD70_03710 PF06178 Oligogalacturonate-specific porin protein (KdgM) HRD70_03715 PF00563 EAL domain HRD70_03715 PF17154 Gammaproteobacterial periplasmic sensor domain HRD70_03715 PF00990 Diguanylate cyclase, GGDEF domain HRD70_03715 PF00672 HAMP domain HRD70_03720 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) HRD70_03725 PF01270 Glycosyl hydrolases family 8 HRD70_03730 PF03170 Bacterial cellulose synthase subunit HRD70_03735 PF07238 PilZ domain HRD70_03735 PF00535 Glycosyl transferase family 2 HRD70_03735 PF03552 Cellulose synthase HRD70_03740 PF06564 Cellulose biosynthesis protein BcsQ HRD70_03750 PF10995 Cellulose biosynthesis GIL HRD70_03755 PF11120 Cellulose biosynthesis protein BcsF HRD70_03760 PF11658 Cellulose biosynthesis protein BcsG HRD70_03765 PF00005 ABC transporter HRD70_03765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRD70_03770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRD70_03770 PF00005 ABC transporter HRD70_03775 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_03775 PF12911 N-terminal TM domain of oligopeptide transport permease C HRD70_03780 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_03785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRD70_03790 PF13332 Hemagglutinin repeat HRD70_03790 PF05860 haemagglutination activity domain HRD70_03790 PF04829 Pre-toxin domain with VENN motif HRD70_03790 PF13018 Extended Signal Peptide of Type V secretion system HRD70_03795 PF17287 POTRA domain HRD70_03795 PF08479 POTRA domain, ShlB-type HRD70_03795 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HRD70_03800 PF13332 Hemagglutinin repeat HRD70_03800 PF05860 haemagglutination activity domain HRD70_03800 PF15526 Novel toxin 21 HRD70_03800 PF04829 Pre-toxin domain with VENN motif HRD70_03800 PF05594 Haemagluttinin repeat HRD70_03810 PF07690 Major Facilitator Superfamily HRD70_03815 PF07730 Histidine kinase HRD70_03815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_03815 PF05231 MASE1 HRD70_03820 PF00196 Bacterial regulatory proteins, luxR family HRD70_03820 PF00072 Response regulator receiver domain HRD70_03825 PF00884 Sulfatase HRD70_03825 PF08019 Phosphoethanolamine transferase EptA/EptB HRD70_03830 PF02566 OsmC-like protein HRD70_03835 PF12146 Serine aminopeptidase, S33 HRD70_03845 PF00324 Amino acid permease HRD70_03850 PF00221 Aromatic amino acid lyase HRD70_03855 PF17391 Urocanase N-terminal domain HRD70_03855 PF17392 Urocanase C-terminal domain HRD70_03855 PF01175 Urocanase Rossmann-like domain HRD70_03860 PF00356 Bacterial regulatory proteins, lacI family HRD70_03870 PF00294 pfkB family carbohydrate kinase HRD70_03875 PF07690 Major Facilitator Superfamily HRD70_03890 PF06755 CbtA_toxin of type IV toxin-antitoxin system HRD70_03900 PF00072 Response regulator receiver domain HRD70_03900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_03900 PF01627 Hpt domain HRD70_03900 PF00989 PAS fold HRD70_03900 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRD70_03900 PF00512 His Kinase A (phospho-acceptor) domain HRD70_03915 PF17345 Family of unknown function (DUF5375) HRD70_03945 PF04606 Ogr/Delta-like zinc finger HRD70_03955 PF00589 Phage integrase family HRD70_03955 PF14659 Phage integrase, N-terminal SAM-like domain HRD70_03955 PF13356 Arm DNA-binding domain HRD70_03965 PF12833 Helix-turn-helix domain HRD70_03970 PF02653 Branched-chain amino acid transport system / permease component HRD70_03975 PF00005 ABC transporter HRD70_03980 PF13407 Periplasmic binding protein domain HRD70_03990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRD70_03990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRD70_03995 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HRD70_03995 PF02753 Pili assembly chaperone PapD, C-terminal domain HRD70_04000 PF00857 Isochorismatase family HRD70_04010 PF01757 Acyltransferase family HRD70_04015 PF07690 Major Facilitator Superfamily HRD70_04020 PF09107 Elongation factor SelB, winged helix HRD70_04020 PF09106 Elongation factor SelB, winged helix HRD70_04020 PF03144 Elongation factor Tu domain 2 HRD70_04020 PF00009 Elongation factor Tu GTP binding domain HRD70_04025 PF03841 L-seryl-tRNA selenium transferase HRD70_04025 PF12390 Selenocysteine synthase N terminal HRD70_04030 PF04216 Protein involved in formate dehydrogenase formation HRD70_04035 PF01292 Prokaryotic cytochrome b561 HRD70_04040 PF13247 4Fe-4S dicluster domain HRD70_04040 PF09163 Formate dehydrogenase N, transmembrane HRD70_04050 PF02634 FdhD/NarQ family HRD70_04055 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HRD70_04060 PF01381 Helix-turn-helix HRD70_04065 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HRD70_04065 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HRD70_04070 PF02203 Tar ligand binding domain homologue HRD70_04070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRD70_04070 PF00672 HAMP domain HRD70_04075 PF10928 Protein of unknown function (DUF2810) HRD70_04080 PF00155 Aminotransferase class I and II HRD70_04080 PF00392 Bacterial regulatory proteins, gntR family HRD70_04090 PF05068 Mannitol repressor HRD70_04095 PF01232 Mannitol dehydrogenase Rossmann domain HRD70_04095 PF08125 Mannitol dehydrogenase C-terminal domain HRD70_04100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HRD70_04100 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HRD70_04100 PF02378 Phosphotransferase system, EIIC HRD70_04110 PF11254 Protein of unknown function (DUF3053) HRD70_04115 PF02092 Glycyl-tRNA synthetase beta subunit HRD70_04115 PF05746 DALR anticodon binding domain HRD70_04120 PF02091 Glycyl-tRNA synthetase alpha subunit HRD70_04125 PF03352 Methyladenine glycosylase HRD70_04130 PF00583 Acetyltransferase (GNAT) family HRD70_04155 PF07690 Major Facilitator Superfamily HRD70_04160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRD70_04160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRD70_04165 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HRD70_04170 PF01402 Ribbon-helix-helix protein, copG family HRD70_04175 PF00128 Alpha amylase, catalytic domain HRD70_04180 PF00155 Aminotransferase class I and II HRD70_04185 PF06826 Predicted Permease Membrane Region HRD70_04185 PF02080 TrkA-C domain HRD70_04190 PF00011 Hsp20/alpha crystallin family HRD70_04195 PF00011 Hsp20/alpha crystallin family HRD70_04200 PF07119 Protein of unknown function (DUF1375) HRD70_04205 PF12566 Protein of unknown function (DUF3748) HRD70_04205 PF07676 WD40-like Beta Propeller Repeat HRD70_04210 PF13309 HTH domain HRD70_04210 PF08348 YheO-like PAS domain HRD70_04215 PF00291 Pyridoxal-phosphate dependent enzyme HRD70_04220 PF02423 Ornithine cyclodeaminase/mu-crystallin family HRD70_04225 PF00392 Bacterial regulatory proteins, gntR family HRD70_04225 PF07702 UTRA domain HRD70_04230 PF00232 Glycosyl hydrolase family 1 HRD70_04235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HRD70_04240 PF02378 Phosphotransferase system, EIIC HRD70_04245 PF00480 ROK family HRD70_04250 PF02264 LamB porin HRD70_04250 PF11471 Maltoporin periplasmic N-terminal extension HRD70_04255 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HRD70_04265 PF00204 DNA gyrase B HRD70_04265 PF00986 DNA gyrase B subunit, carboxyl terminus HRD70_04265 PF18053 DNA gyrase B subunit insert domain HRD70_04265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_04265 PF01751 Toprim domain HRD70_04270 PF02463 RecF/RecN/SMC N terminal domain HRD70_04275 PF00712 DNA polymerase III beta subunit, N-terminal domain HRD70_04275 PF02767 DNA polymerase III beta subunit, central domain HRD70_04275 PF02768 DNA polymerase III beta subunit, C-terminal domain HRD70_04280 PF00308 Bacterial dnaA protein HRD70_04280 PF08299 Bacterial dnaA protein helix-turn-helix HRD70_04280 PF11638 DnaA N-terminal domain HRD70_04285 PF00468 Ribosomal protein L34 HRD70_04290 PF00825 Ribonuclease P HRD70_04295 PF01809 Putative membrane protein insertion efficiency factor HRD70_04300 PF02096 60Kd inner membrane protein HRD70_04300 PF14849 YidC periplasmic domain HRD70_04305 PF12631 MnmE helical domain HRD70_04305 PF01926 50S ribosome-binding GTPase HRD70_04305 PF10396 GTP-binding protein TrmE N-terminus HRD70_04310 PF07055 Enoyl reductase FAD binding domain HRD70_04310 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HRD70_04310 PF12241 Trans-2-enoyl-CoA reductase catalytic region HRD70_04320 PF00005 ABC transporter HRD70_04320 PF09383 NIL domain HRD70_04325 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_04330 PF00672 HAMP domain HRD70_04330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRD70_04330 PF02203 Tar ligand binding domain homologue HRD70_04335 PF03358 NADPH-dependent FMN reductase HRD70_04340 PF00512 His Kinase A (phospho-acceptor) domain HRD70_04340 PF00989 PAS fold HRD70_04340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_04345 PF00072 Response regulator receiver domain HRD70_04345 PF00196 Bacterial regulatory proteins, luxR family HRD70_04355 PF00860 Permease family HRD70_04360 PF13419 Haloacid dehalogenase-like hydrolase HRD70_04365 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_04370 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_04375 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRD70_04385 PF01895 PhoU domain HRD70_04390 PF00005 ABC transporter HRD70_04395 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_04400 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_04405 PF12849 PBP superfamily domain HRD70_04410 PF01380 SIS domain HRD70_04415 PF12804 MobA-like NTP transferase domain HRD70_04415 PF00132 Bacterial transferase hexapeptide (six repeats) HRD70_04420 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HRD70_04420 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HRD70_04425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRD70_04425 PF02874 ATP synthase alpha/beta family, beta-barrel domain HRD70_04430 PF00231 ATP synthase HRD70_04435 PF02874 ATP synthase alpha/beta family, beta-barrel domain HRD70_04435 PF00306 ATP synthase alpha/beta chain, C terminal domain HRD70_04435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRD70_04440 PF00213 ATP synthase delta (OSCP) subunit HRD70_04445 PF00430 ATP synthase B/B' CF(0) HRD70_04450 PF00137 ATP synthase subunit C HRD70_04455 PF00119 ATP synthase A chain HRD70_04460 PF03899 ATP synthase I chain HRD70_04465 PF02527 rRNA small subunit methyltransferase G HRD70_04470 PF13932 GidA associated domain HRD70_04470 PF01134 Glucose inhibited division protein A HRD70_04475 PF00258 Flavodoxin HRD70_04480 PF01037 Lrp/AsnC ligand binding domain HRD70_04485 PF03590 Aspartate-ammonia ligase HRD70_04495 PF05762 VWA domain containing CoxE-like protein HRD70_04500 PF07728 AAA domain (dynein-related subfamily) HRD70_04500 PF17868 AAA lid domain HRD70_04500 PF12592 Protein of unknown function (DUF3763) HRD70_04505 PF02705 K+ potassium transporter HRD70_04510 PF05025 RbsD / FucU transport protein family HRD70_04515 PF00005 ABC transporter HRD70_04520 PF02653 Branched-chain amino acid transport system / permease component HRD70_04525 PF13407 Periplasmic binding protein domain HRD70_04530 PF00294 pfkB family carbohydrate kinase HRD70_04535 PF00356 Bacterial regulatory proteins, lacI family HRD70_04540 PF07690 Major Facilitator Superfamily HRD70_04545 PF00392 Bacterial regulatory proteins, gntR family HRD70_04545 PF07729 FCD domain HRD70_04570 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HRD70_04575 PF12804 MobA-like NTP transferase domain HRD70_04580 PF06288 Protein of unknown function (DUF1040) HRD70_04585 PF01636 Phosphotransferase enzyme family HRD70_04590 PF01323 DSBA-like thioredoxin domain HRD70_04595 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HRD70_04595 PF01612 3'-5' exonuclease HRD70_04595 PF00476 DNA polymerase family A HRD70_04595 PF01367 5'-3' exonuclease, C-terminal SAM fold HRD70_04600 PF01926 50S ribosome-binding GTPase HRD70_04605 PF04220 Der GTPase activator (YihI) HRD70_04610 PF04055 Radical SAM superfamily HRD70_04610 PF06969 HemN C-terminal domain HRD70_04615 PF00072 Response regulator receiver domain HRD70_04615 PF00158 Sigma-54 interaction domain HRD70_04615 PF02954 Bacterial regulatory protein, Fis family HRD70_04620 PF00512 His Kinase A (phospho-acceptor) domain HRD70_04620 PF00989 PAS fold HRD70_04620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_04625 PF03951 Glutamine synthetase, beta-Grasp domain HRD70_04625 PF00120 Glutamine synthetase, catalytic domain HRD70_04635 PF13419 Haloacid dehalogenase-like hydrolase HRD70_04640 PF03631 Virulence factor BrkB HRD70_04645 PF02580 D-Tyr-tRNA(Tyr) deacylase HRD70_04650 PF00583 Acetyltransferase (GNAT) family HRD70_04650 PF09500 Putative thioesterase (yiiD_Cterm) HRD70_04655 PF13693 Winged helix-turn-helix DNA-binding HRD70_04665 PF05170 AsmA family HRD70_04670 PF00860 Permease family HRD70_04675 PF03616 Sodium/glutamate symporter HRD70_04680 PF17191 RecG wedge domain HRD70_04680 PF00270 DEAD/DEAH box helicase HRD70_04680 PF00271 Helicase conserved C-terminal domain HRD70_04685 PF12105 SpoU, rRNA methylase, C-terminal HRD70_04685 PF00588 SpoU rRNA Methylase family HRD70_04690 PF13291 ACT domain HRD70_04690 PF02824 TGS domain HRD70_04690 PF04607 Region found in RelA / SpoT proteins HRD70_04695 PF01192 RNA polymerase Rpb6 HRD70_04700 PF00625 Guanylate kinase HRD70_04705 PF01653 NAD-dependent DNA ligase adenylation domain HRD70_04705 PF03120 NAD-dependent DNA ligase OB-fold domain HRD70_04710 PF03458 UPF0126 domain HRD70_04720 PF01773 Na+ dependent nucleoside transporter N-terminus HRD70_04720 PF07662 Na+ dependent nucleoside transporter C-terminus HRD70_04720 PF07670 Nucleoside recognition HRD70_04725 PF00378 Enoyl-CoA hydratase/isomerase HRD70_04730 PF00990 Diguanylate cyclase, GGDEF domain HRD70_04730 PF00563 EAL domain HRD70_04730 PF13426 PAS domain HRD70_04745 PF13302 Acetyltransferase (GNAT) domain HRD70_04745 PF03352 Methyladenine glycosylase HRD70_04745 PF13673 Acetyltransferase (GNAT) domain HRD70_04745 PF00117 Glutamine amidotransferase class-I HRD70_04745 PF00958 GMP synthase C terminal domain HRD70_04765 PF01381 Helix-turn-helix HRD70_04805 PF03755 YicC-like family, N-terminal region HRD70_04805 PF08340 Domain of unknown function (DUF1732) HRD70_04810 PF01138 3' exoribonuclease family, domain 1 HRD70_04810 PF03725 3' exoribonuclease family, domain 2 HRD70_04815 PF00156 Phosphoribosyl transferase domain HRD70_04820 PF00440 Bacterial regulatory proteins, tetR family HRD70_04825 PF00692 dUTPase HRD70_04830 PF04127 DNA / pantothenate metabolism flavoprotein HRD70_04830 PF02441 Flavoprotein HRD70_04835 PF04002 RadC-like JAB domain HRD70_04840 PF00830 Ribosomal L28 family HRD70_04845 PF00471 Ribosomal protein L33 HRD70_04850 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HRD70_04850 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HRD70_04850 PF06827 Zinc finger found in FPG and IleRS HRD70_04860 PF00535 Glycosyl transferase family 2 HRD70_04865 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HRD70_04870 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HRD70_04875 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HRD70_04880 PF01370 NAD dependent epimerase/dehydratase family HRD70_04885 PF00155 Aminotransferase class I and II HRD70_04890 PF00107 Zinc-binding dehydrogenase HRD70_04890 PF08240 Alcohol dehydrogenase GroES-like domain HRD70_04895 PF04748 Divergent polysaccharide deacetylase HRD70_04900 PF01551 Peptidase family M23 HRD70_04905 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HRD70_04905 PF01676 Metalloenzyme superfamily HRD70_04910 PF00581 Rhodanese-like domain HRD70_04915 PF00462 Glutaredoxin HRD70_04920 PF02556 Preprotein translocase subunit SecB HRD70_04925 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HRD70_04925 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HRD70_04930 PF06426 Serine acetyltransferase, N-terminal HRD70_04930 PF00132 Bacterial transferase hexapeptide (six repeats) HRD70_04935 PF00588 SpoU rRNA Methylase family HRD70_04940 PF12833 Helix-turn-helix domain HRD70_04940 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HRD70_04940 PF02805 Metal binding domain of Ada HRD70_04940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HRD70_04945 PF00512 His Kinase A (phospho-acceptor) domain HRD70_04945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_04945 PF00672 HAMP domain HRD70_04945 PF16527 Two-component sensor protein CpxA, periplasmic domain HRD70_04950 PF00072 Response regulator receiver domain HRD70_04950 PF00486 Transcriptional regulatory protein, C terminal HRD70_04955 PF07813 LTXXQ motif family protein HRD70_04960 PF16916 Dimerisation domain of Zinc Transporter HRD70_04960 PF01545 Cation efflux family HRD70_04965 PF00365 Phosphofructokinase HRD70_04980 PF00121 Triosephosphate isomerase HRD70_04985 PF07305 Protein of unknown function (DUF1454) HRD70_04990 PF05656 Protein of unknown function (DUF805) HRD70_04995 PF00175 Oxidoreductase NAD-binding domain HRD70_04995 PF00970 Oxidoreductase FAD-binding domain HRD70_05000 PF07690 Major Facilitator Superfamily HRD70_05005 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HRD70_05010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRD70_05010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRD70_05015 PF00230 Major intrinsic protein HRD70_05020 PF06005 Cell division protein ZapB HRD70_05025 PF03737 Aldolase/RraA HRD70_05030 PF01040 UbiA prenyltransferase family HRD70_05035 PF00004 ATPase family associated with various cellular activities (AAA) HRD70_05035 PF07724 AAA domain (Cdc48 subfamily) HRD70_05035 PF10431 C-terminal, D2-small domain, of ClpB protein HRD70_05040 PF00227 Proteasome subunit HRD70_05045 PF05036 Sporulation related domain HRD70_05050 PF00356 Bacterial regulatory proteins, lacI family HRD70_05055 PF00270 DEAD/DEAH box helicase HRD70_05055 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HRD70_05055 PF17764 3′ DNA-binding domain (3′BD) HRD70_05055 PF18074 Primosomal protein N C-terminal domain HRD70_05055 PF00271 Helicase conserved C-terminal domain HRD70_05060 PF01197 Ribosomal protein L31 HRD70_05065 PF01340 Met Apo-repressor, MetJ HRD70_05070 PF01053 Cys/Met metabolism PLP-dependent enzyme HRD70_05075 PF00696 Amino acid kinase family HRD70_05075 PF03447 Homoserine dehydrogenase, NAD binding domain HRD70_05075 PF00742 Homoserine dehydrogenase HRD70_05080 PF02219 Methylenetetrahydrofolate reductase HRD70_05085 PF00311 Phosphoenolpyruvate carboxylase HRD70_05090 PF01546 Peptidase family M20/M25/M40 HRD70_05090 PF07687 Peptidase dimerisation domain HRD70_05095 PF01118 Semialdehyde dehydrogenase, NAD binding domain HRD70_05095 PF02774 Semialdehyde dehydrogenase, dimerisation domain HRD70_05100 PF00696 Amino acid kinase family HRD70_05105 PF00206 Lyase HRD70_05105 PF14698 Argininosuccinate lyase C-terminal HRD70_05110 PF07715 TonB-dependent Receptor Plug Domain HRD70_05110 PF00593 TonB dependent receptor HRD70_05130 PF00005 ABC transporter HRD70_05130 PF00664 ABC transporter transmembrane region HRD70_05135 PF00529 HlyD membrane-fusion protein of T1SS HRD70_05145 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRD70_05145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRD70_05150 PF08534 Redoxin HRD70_05150 PF00462 Glutaredoxin HRD70_05155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_05155 PF03466 LysR substrate binding domain HRD70_05160 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRD70_05160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRD70_05165 PF00440 Bacterial regulatory proteins, tetR family HRD70_05170 PF07226 Protein of unknown function (DUF1422) HRD70_05175 PF05958 tRNA (Uracil-5-)-methyltransferase HRD70_05180 PF00593 TonB dependent receptor HRD70_05180 PF07715 TonB-dependent Receptor Plug Domain HRD70_05185 PF01177 Asp/Glu/Hydantoin racemase HRD70_05225 PF03466 LysR substrate binding domain HRD70_05225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_05230 PF04219 Protein of unknown function, DUF HRD70_05235 PF01078 Magnesium chelatase, subunit ChlI HRD70_05235 PF13335 Magnesium chelatase, subunit ChlI C-terminal HRD70_05240 PF08046 IlvGEDA operon leader peptide HRD70_05245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRD70_05245 PF00205 Thiamine pyrophosphate enzyme, central domain HRD70_05245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRD70_05255 PF01063 Amino-transferase class IV HRD70_05260 PF00920 Dehydratase family HRD70_05265 PF00291 Pyridoxal-phosphate dependent enzyme HRD70_05265 PF00585 C-terminal regulatory domain of Threonine dehydratase HRD70_05275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_05275 PF03466 LysR substrate binding domain HRD70_05280 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HRD70_05280 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HRD70_05290 PF01320 Colicin immunity protein / pyocin immunity protein HRD70_05295 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 HRD70_05295 PF03515 Colicin-like bacteriocin tRNase domain HRD70_05300 PF01320 Colicin immunity protein / pyocin immunity protein HRD70_05305 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 HRD70_05305 PF03515 Colicin-like bacteriocin tRNase domain HRD70_05310 PF01320 Colicin immunity protein / pyocin immunity protein HRD70_05325 PF07690 Major Facilitator Superfamily HRD70_05330 PF03737 Aldolase/RraA HRD70_05330 PF00180 Isocitrate/isopropylmalate dehydrogenase HRD70_05335 PF00920 Dehydratase family HRD70_05340 PF02753 Pili assembly chaperone PapD, C-terminal domain HRD70_05340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HRD70_05350 PF13954 PapC N-terminal domain HRD70_05350 PF13953 PapC C-terminal domain HRD70_05350 PF00577 Outer membrane usher protein HRD70_05355 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HRD70_05355 PF02753 Pili assembly chaperone PapD, C-terminal domain HRD70_05370 PF00580 UvrD/REP helicase N-terminal domain HRD70_05370 PF13361 UvrD-like helicase C-terminal domain HRD70_05375 PF02541 Ppx/GppA phosphatase family HRD70_05380 PF00270 DEAD/DEAH box helicase HRD70_05380 PF00271 Helicase conserved C-terminal domain HRD70_05385 PF00085 Thioredoxin HRD70_05390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRD70_05390 PF07498 Rho termination factor, N-terminal domain HRD70_05390 PF07497 Rho termination factor, RNA-binding domain HRD70_05395 PF00953 Glycosyl transferase family 4 HRD70_05400 PF02706 Chain length determinant protein HRD70_05405 PF02350 UDP-N-acetylglucosamine 2-epimerase HRD70_05410 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HRD70_05410 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HRD70_05410 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HRD70_05415 PF16363 GDP-mannose 4,6 dehydratase HRD70_05420 PF00483 Nucleotidyl transferase HRD70_05430 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HRD70_05435 PF01943 Polysaccharide biosynthesis protein HRD70_05440 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 HRD70_05445 PF06899 WzyE protein, O-antigen assembly polymerase HRD70_05450 PF03808 Glycosyl transferase WecB/TagA/CpsF family HRD70_05455 PF00324 Amino acid permease HRD70_05480 PF07719 Tetratricopeptide repeat HRD70_05480 PF07219 HemY protein N-terminus HRD70_05485 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HRD70_05490 PF02602 Uroporphyrinogen-III synthase HemD HRD70_05495 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HRD70_05495 PF03900 Porphobilinogen deaminase, C-terminal domain HRD70_05500 PF01295 Adenylate cyclase, class-I HRD70_05500 PF12633 Adenylate cyclase NT domain HRD70_05505 PF01491 Frataxin-like domain HRD70_05510 PF13627 Prokaryotic lipoprotein-attachment site HRD70_05515 PF01678 Diaminopimelate epimerase HRD70_05520 PF04340 Protein of unknown function, DUF484 HRD70_05525 PF02899 Phage integrase, N-terminal SAM-like domain HRD70_05525 PF00589 Phage integrase family HRD70_05530 PF13419 Haloacid dehalogenase-like hydrolase HRD70_05535 PF13361 UvrD-like helicase C-terminal domain HRD70_05535 PF00580 UvrD/REP helicase N-terminal domain HRD70_05550 PF09370 Phosphoenolpyruvate hydrolase-like HRD70_05560 PF01544 CorA-like Mg2+ transporter protein HRD70_05565 PF00892 EamA-like transporter family HRD70_05570 PF03061 Thioesterase superfamily HRD70_05575 PF02253 Phospholipase A1 HRD70_05580 PF09382 RQC domain HRD70_05580 PF00570 HRDC domain HRD70_05580 PF00271 Helicase conserved C-terminal domain HRD70_05580 PF16124 RecQ zinc-binding HRD70_05580 PF00270 DEAD/DEAH box helicase HRD70_05590 PF01810 LysE type translocator HRD70_05595 PF12146 Serine aminopeptidase, S33 HRD70_05605 PF03009 Glycerophosphoryl diester phosphodiesterase family HRD70_05610 PF07690 Major Facilitator Superfamily HRD70_05620 PF01266 FAD dependent oxidoreductase HRD70_05620 PF04324 BFD-like [2Fe-2S] binding domain HRD70_05625 PF00890 FAD binding domain HRD70_05630 PF02754 Cysteine-rich domain HRD70_05630 PF13183 4Fe-4S dicluster domain HRD70_05635 PF08786 DcrB HRD70_05640 PF02592 Putative vitamin uptake transporter HRD70_05645 PF01206 Sulfurtransferase TusA HRD70_05650 PF00403 Heavy-metal-associated domain HRD70_05655 PF07947 YhhN family HRD70_05670 PF06611 Protein of unknown function (DUF1145) HRD70_05680 PF00448 SRP54-type protein, GTPase domain HRD70_05680 PF02881 SRP54-type protein, helical bundle domain HRD70_05685 PF00005 ABC transporter HRD70_05690 PF02687 FtsX-like permease family HRD70_05690 PF18075 FtsX extracellular domain HRD70_05695 PF04545 Sigma-70, region 4 HRD70_05695 PF04542 Sigma-70 region 2 HRD70_05695 PF00140 Sigma-70 factor, region 1.2 HRD70_05710 PF12568 Acetyltransferase (GNAT) domain, PanZ HRD70_05715 PF13458 Periplasmic binding protein HRD70_05720 PF02653 Branched-chain amino acid transport system / permease component HRD70_05725 PF11862 Domain of unknown function (DUF3382) HRD70_05725 PF02653 Branched-chain amino acid transport system / permease component HRD70_05730 PF12399 Branched-chain amino acid ATP-binding cassette transporter HRD70_05730 PF00005 ABC transporter HRD70_05735 PF00005 ABC transporter HRD70_05770 PF13416 Bacterial extracellular solute-binding protein HRD70_05775 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_05780 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_05785 PF00005 ABC transporter HRD70_05785 PF17912 MalK OB fold domain HRD70_05790 PF03009 Glycerophosphoryl diester phosphodiesterase family HRD70_05795 PF03547 Membrane transport protein HRD70_05800 PF00892 EamA-like transporter family HRD70_05805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_05805 PF03466 LysR substrate binding domain HRD70_05810 PF08267 Cobalamin-independent synthase, N-terminal domain HRD70_05810 PF01717 Cobalamin-independent synthase, Catalytic domain HRD70_05815 PF01738 Dienelactone hydrolase family HRD70_05820 PF01048 Phosphorylase superfamily HRD70_05830 PF02554 Carbon starvation protein CstA HRD70_05830 PF13722 5TM C-terminal transporter carbon starvation CstA HRD70_05835 PF09335 SNARE associated Golgi protein HRD70_05840 PF02646 RmuC family HRD70_05845 PF01209 ubiE/COQ5 methyltransferase family HRD70_05850 PF02036 SCP-2 sterol transfer family HRD70_05855 PF03109 ABC1 family HRD70_05860 PF02416 mttA/Hcf106 family HRD70_05870 PF00902 Sec-independent protein translocase protein (TatC) HRD70_05875 PF01026 TatD related DNase HRD70_05880 PF00490 Delta-aminolevulinic acid dehydratase HRD70_05885 PF02357 Transcription termination factor nusG HRD70_05890 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HRD70_05895 PF00175 Oxidoreductase NAD-binding domain HRD70_05895 PF00970 Oxidoreductase FAD-binding domain HRD70_05900 PF00108 Thiolase, N-terminal domain HRD70_05900 PF02803 Thiolase, C-terminal domain HRD70_05905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HRD70_05905 PF00378 Enoyl-CoA hydratase/isomerase HRD70_05905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HRD70_05910 PF00557 Metallopeptidase family M24 HRD70_05915 PF09186 Domain of unknown function (DUF1949) HRD70_05915 PF01205 Uncharacterized protein family UPF0029 HRD70_05920 PF02386 Cation transport protein HRD70_05925 PF12724 Flavodoxin domain HRD70_05950 PF00474 Sodium:solute symporter family HRD70_05955 PF04341 Protein of unknown function, DUF485 HRD70_05960 PF00501 AMP-binding enzyme HRD70_05960 PF16177 Acetyl-coenzyme A synthetase N-terminus HRD70_05960 PF13193 AMP-binding enzyme C-terminal domain HRD70_05965 PF00375 Sodium:dicarboxylate symporter family HRD70_05970 PF00072 Response regulator receiver domain HRD70_05970 PF00196 Bacterial regulatory proteins, luxR family HRD70_05975 PF00672 HAMP domain HRD70_05975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_05975 PF00512 His Kinase A (phospho-acceptor) domain HRD70_05975 PF01627 Hpt domain HRD70_05975 PF00072 Response regulator receiver domain HRD70_05975 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HRD70_05985 PF03958 Bacterial type II/III secretion system short domain HRD70_05985 PF00263 Bacterial type II and III secretion system protein HRD70_06005 PF03433 EspA-like secreted protein HRD70_06015 PF04888 Secretion system effector C (SseC) like family HRD70_06020 PF05802 Enterobacterial EspB protein HRD70_06040 PF14525 AraC-binding-like domain HRD70_06040 PF12833 Helix-turn-helix domain HRD70_06060 PF01514 Secretory protein of YscJ/FliF family HRD70_06075 PF07201 HrpJ-like domain HRD70_06085 PF00771 FHIPEP family HRD70_06090 PF18269 T3SS EscN ATPase C-terminal domain HRD70_06090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRD70_06105 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HRD70_06110 PF00813 FliP family HRD70_06115 PF01313 Bacterial export proteins, family 3 HRD70_06120 PF01311 Bacterial export proteins, family 1 HRD70_06125 PF01312 FlhB HrpN YscU SpaS Family HRD70_06130 PF04143 Sulphur transport HRD70_06135 PF01206 Sulfurtransferase TusA HRD70_06145 PF04542 Sigma-70 region 2 HRD70_06145 PF04545 Sigma-70, region 4 HRD70_06145 PF04539 Sigma-70 region 3 HRD70_06150 PF16220 Domain of unknown function (DUF4880) HRD70_06150 PF04773 FecR protein HRD70_06155 PF07715 TonB-dependent Receptor Plug Domain HRD70_06160 PF06472 ABC transporter transmembrane region 2 HRD70_06160 PF00005 ABC transporter HRD70_06165 PF00675 Insulinase (Peptidase family M16) HRD70_06165 PF05193 Peptidase M16 inactive domain HRD70_06170 PF00924 Mechanosensitive ion channel HRD70_06170 PF12794 Mechanosensitive ion channel inner membrane domain 1 HRD70_06170 PF12795 Mechanosensitive ion channel porin domain HRD70_06175 PF07715 TonB-dependent Receptor Plug Domain HRD70_06175 PF00593 TonB dependent receptor HRD70_06185 PF00155 Aminotransferase class I and II HRD70_06185 PF00392 Bacterial regulatory proteins, gntR family HRD70_06190 PF00005 ABC transporter HRD70_06195 PF01032 FecCD transport family HRD70_06200 PF01497 Periplasmic binding protein HRD70_06205 PF05171 Haemin-degrading HemS.ChuX domain HRD70_06210 PF00593 TonB dependent receptor HRD70_06210 PF07715 TonB-dependent Receptor Plug Domain HRD70_06215 PF10636 Hemin uptake protein hemP HRD70_06220 PF00106 short chain dehydrogenase HRD70_06225 PF01032 FecCD transport family HRD70_06235 PF07715 TonB-dependent Receptor Plug Domain HRD70_06235 PF00593 TonB dependent receptor HRD70_06245 PF04542 Sigma-70 region 2 HRD70_06245 PF08281 Sigma-70, region 4 HRD70_06255 PF13614 AAA domain HRD70_06265 PF00772 DnaB-like helicase N terminal domain HRD70_06265 PF03796 DnaB-like helicase C terminal domain HRD70_06305 PF01751 Toprim domain HRD70_06305 PF01131 DNA topoisomerase HRD70_06370 PF13614 AAA domain HRD70_06430 PF00271 Helicase conserved C-terminal domain HRD70_06465 PF06406 StbA protein HRD70_06490 PF04002 RadC-like JAB domain HRD70_06495 PF03230 Antirestriction protein HRD70_06520 PF06755 CbtA_toxin of type IV toxin-antitoxin system HRD70_06535 PF00394 Multicopper oxidase HRD70_06535 PF07731 Multicopper oxidase HRD70_06535 PF07732 Multicopper oxidase HRD70_06535 PF10518 TAT (twin-arginine translocation) pathway signal sequence HRD70_06550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_06550 PF00672 HAMP domain HRD70_06550 PF00512 His Kinase A (phospho-acceptor) domain HRD70_06555 PF00486 Transcriptional regulatory protein, C terminal HRD70_06555 PF00072 Response regulator receiver domain HRD70_06560 PF05425 Copper resistance protein D HRD70_06565 PF04234 CopC domain HRD70_06570 PF05275 Copper resistance protein B precursor (CopB) HRD70_06575 PF07731 Multicopper oxidase HRD70_06575 PF07732 Multicopper oxidase HRD70_06575 PF00394 Multicopper oxidase HRD70_06590 PF01551 Peptidase family M23 HRD70_06590 PF08525 Opacity-associated protein A N-terminal motif HRD70_06590 PF01476 LysM domain HRD70_06600 PF04945 YHS domain HRD70_06610 PF00873 AcrB/AcrD/AcrF family HRD70_06615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRD70_06620 PF11604 Copper binding periplasmic protein CusF HRD70_06625 PF02321 Outer membrane efflux protein HRD70_06630 PF00486 Transcriptional regulatory protein, C terminal HRD70_06630 PF00072 Response regulator receiver domain HRD70_06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_06635 PF00512 His Kinase A (phospho-acceptor) domain HRD70_06635 PF00672 HAMP domain HRD70_06650 PF00589 Phage integrase family HRD70_06650 PF02899 Phage integrase, N-terminal SAM-like domain HRD70_06665 PF02595 Glycerate kinase family HRD70_06670 PF02683 Cytochrome C biogenesis protein transmembrane region HRD70_06670 PF11412 Disulphide bond corrector protein DsbC HRD70_06675 PF03091 CutA1 divalent ion tolerance protein HRD70_06680 PF03605 Anaerobic c4-dicarboxylate membrane transporter HRD70_06685 PF00206 Lyase HRD70_06685 PF10415 Fumarase C C-terminus HRD70_06690 PF04186 FxsA cytoplasmic membrane protein HRD70_06695 PF00166 Chaperonin 10 Kd subunit HRD70_06700 PF00118 TCP-1/cpn60 chaperonin family HRD70_06705 PF13698 Domain of unknown function (DUF4156) HRD70_06710 PF04055 Radical SAM superfamily HRD70_06715 PF09285 Elongation factor P, C-terminal HRD70_06715 PF08207 Elongation factor P (EF-P) KOW-like domain HRD70_06715 PF01132 Elongation factor P (EF-P) OB domain HRD70_06720 PF08085 Entericidin EcnA/B family HRD70_06725 PF00893 Small Multidrug Resistance protein HRD70_06730 PF08212 Lipocalin-like domain HRD70_06735 PF02313 Fumarate reductase subunit D HRD70_06740 PF02300 Fumarate reductase subunit C HRD70_06745 PF13085 2Fe-2S iron-sulfur cluster binding domain HRD70_06745 PF13183 4Fe-4S dicluster domain HRD70_06750 PF00890 FAD binding domain HRD70_06750 PF02910 Fumarate reductase flavoprotein C-term HRD70_06755 PF00152 tRNA synthetases class II (D, K and N) HRD70_06760 PF12794 Mechanosensitive ion channel inner membrane domain 1 HRD70_06760 PF12795 Mechanosensitive ion channel porin domain HRD70_06760 PF00924 Mechanosensitive ion channel HRD70_06765 PF02666 Phosphatidylserine decarboxylase HRD70_06770 PF03193 RsgA GTPase HRD70_06775 PF00929 Exonuclease HRD70_06795 PF08331 Domain of unknown function (DUF1730) HRD70_06800 PF01256 Carbohydrate kinase HRD70_06800 PF03853 YjeF-related protein N-terminus HRD70_06810 PF01520 N-acetylmuramoyl-L-alanine amidase HRD70_06815 PF01119 DNA mismatch repair protein, C-terminal domain HRD70_06815 PF08676 MutL C terminal dimerisation domain HRD70_06825 PF17209 Hfq protein HRD70_06830 PF13167 GTP-binding GTPase N-terminal HRD70_06830 PF01926 50S ribosome-binding GTPase HRD70_06830 PF16360 GTP-binding GTPase Middle Region HRD70_06835 PF01145 SPFH domain / Band 7 family HRD70_06835 PF12221 Bacterial membrane protein N terminal HRD70_06840 PF01145 SPFH domain / Band 7 family HRD70_06845 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) HRD70_06850 PF00709 Adenylosuccinate synthetase HRD70_06855 PF02082 Transcriptional regulator HRD70_06860 PF00773 RNB domain HRD70_06860 PF00575 S1 RNA binding domain HRD70_06860 PF17876 Cold shock domain HRD70_06860 PF08461 Ribonuclease R winged-helix domain HRD70_06860 PF08206 Ribonuclease B OB domain HRD70_06865 PF08032 RNA 2'-O ribose methyltransferase substrate binding HRD70_06865 PF00588 SpoU rRNA Methylase family HRD70_06870 PF02770 Acyl-CoA dehydrogenase, middle domain HRD70_06870 PF18158 Adaptive response protein AidB N-terminal domain HRD70_06870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRD70_06875 PF07338 Protein of unknown function (DUF1471) HRD70_06880 PF00326 Prolyl oligopeptidase family HRD70_06890 PF01250 Ribosomal protein S6 HRD70_06895 PF00436 Single-strand binding protein family HRD70_06900 PF01084 Ribosomal protein S18 HRD70_06905 PF03948 Ribosomal protein L9, C-terminal domain HRD70_06905 PF01281 Ribosomal protein L9, N-terminal domain HRD70_06915 PF08525 Opacity-associated protein A N-terminal motif HRD70_06915 PF04225 Opacity-associated protein A LysM-like domain HRD70_06920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRD70_06920 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HRD70_06925 PF02872 5'-nucleotidase, C-terminal domain HRD70_06925 PF00149 Calcineurin-like phosphoesterase HRD70_06930 PF00459 Inositol monophosphatase family HRD70_06935 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HRD70_06940 PF06526 Protein of unknown function (DUF1107) HRD70_06945 PF01595 Cyclin M transmembrane N-terminal domain HRD70_06945 PF03471 Transporter associated domain HRD70_06945 PF00571 CBS domain HRD70_06950 PF01625 Peptide methionine sulfoxide reductase HRD70_06960 PF04357 TamB, inner membrane protein subunit of TAM complex HRD70_06965 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HRD70_06970 PF00719 Inorganic pyrophosphatase HRD70_06975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRD70_06975 PF00672 HAMP domain HRD70_06975 PF02203 Tar ligand binding domain homologue HRD70_06980 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HRD70_06985 PF08245 Mur ligase middle domain HRD70_06985 PF01225 Mur ligase family, catalytic domain HRD70_06985 PF02875 Mur ligase family, glutamate ligase domain HRD70_07000 PF01316 Arginine repressor, DNA binding domain HRD70_07000 PF02863 Arginine repressor, C-terminal domain HRD70_07005 PF00056 lactate/malate dehydrogenase, NAD binding domain HRD70_07005 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HRD70_07010 PF13693 Winged helix-turn-helix DNA-binding HRD70_07020 PF00348 Polyprenyl synthetase HRD70_07025 PF00829 Ribosomal prokaryotic L21 protein HRD70_07030 PF01016 Ribosomal L27 protein HRD70_07035 PF00892 EamA-like transporter family HRD70_07040 PF01926 50S ribosome-binding GTPase HRD70_07040 PF01018 GTP1/OBG HRD70_07045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_07045 PF00672 HAMP domain HRD70_07045 PF00512 His Kinase A (phospho-acceptor) domain HRD70_07050 PF00486 Transcriptional regulatory protein, C terminal HRD70_07050 PF00072 Response regulator receiver domain HRD70_07055 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HRD70_07060 PF01272 Transcription elongation factor, GreA/GreB, C-term HRD70_07060 PF03449 Transcription elongation factor, N-terminal HRD70_07065 PF01985 CRS1 / YhbY (CRM) domain HRD70_07070 PF01728 FtsJ-like methyltransferase HRD70_07075 PF01434 Peptidase family M41 HRD70_07075 PF00004 ATPase family associated with various cellular activities (AAA) HRD70_07075 PF17862 AAA+ lid domain HRD70_07075 PF06480 FtsH Extracellular HRD70_07080 PF00809 Pterin binding enzyme HRD70_07085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRD70_07085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRD70_07085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRD70_07085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRD70_07090 PF03840 Preprotein translocase SecG subunit HRD70_07105 PF02576 RimP N-terminal domain HRD70_07105 PF17384 RimP C-terminal SH3 domain HRD70_07110 PF13184 NusA-like KH domain HRD70_07110 PF08529 NusA N-terminal domain HRD70_07110 PF00575 S1 RNA binding domain HRD70_07115 PF11987 Translation-initiation factor 2 HRD70_07115 PF03144 Elongation factor Tu domain 2 HRD70_07115 PF04760 Translation initiation factor IF-2, N-terminal region HRD70_07115 PF08364 Bacterial translation initiation factor IF-2 associated region HRD70_07115 PF00009 Elongation factor Tu GTP binding domain HRD70_07120 PF02033 Ribosome-binding factor A HRD70_07125 PF16198 tRNA pseudouridylate synthase B C-terminal domain HRD70_07125 PF01509 TruB family pseudouridylate synthase (N terminal domain) HRD70_07125 PF09157 Pseudouridine synthase II TruB, C-terminal HRD70_07130 PF00312 Ribosomal protein S15 HRD70_07135 PF03725 3' exoribonuclease family, domain 2 HRD70_07135 PF00013 KH domain HRD70_07135 PF00575 S1 RNA binding domain HRD70_07135 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HRD70_07135 PF01138 3' exoribonuclease family, domain 1 HRD70_07140 PF07719 Tetratricopeptide repeat HRD70_07140 PF13181 Tetratricopeptide repeat HRD70_07150 PF12343 Cold shock protein DEAD box A HRD70_07150 PF00271 Helicase conserved C-terminal domain HRD70_07150 PF00270 DEAD/DEAH box helicase HRD70_07150 PF03880 DbpA RNA binding domain HRD70_07155 PF00296 Luciferase-like monooxygenase HRD70_07160 PF01136 Peptidase family U32 HRD70_07165 PF01136 Peptidase family U32 HRD70_07170 PF02036 SCP-2 sterol transfer family HRD70_07175 PF13508 Acetyltransferase (GNAT) domain HRD70_07180 PF01541 GIY-YIG catalytic domain HRD70_07185 PF13520 Amino acid permease HRD70_07190 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HRD70_07190 PF01276 Orn/Lys/Arg decarboxylase, major domain HRD70_07190 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HRD70_07210 PF13416 Bacterial extracellular solute-binding protein HRD70_07215 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_07220 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_07225 PF00005 ABC transporter HRD70_07225 PF03459 TOBE domain HRD70_07225 PF17912 MalK OB fold domain HRD70_07240 PF13460 NAD(P)H-binding HRD70_07245 PF12706 Beta-lactamase superfamily domain HRD70_07255 PF07969 Amidohydrolase family HRD70_07260 PF00005 ABC transporter HRD70_07265 PF00005 ABC transporter HRD70_07270 PF06007 Phosphonate metabolism protein PhnJ HRD70_07275 PF05861 Bacterial phosphonate metabolism protein (PhnI) HRD70_07280 PF05845 Bacterial phosphonate metabolism protein (PhnH) HRD70_07285 PF06754 Phosphonate metabolism protein PhnG HRD70_07290 PF00392 Bacterial regulatory proteins, gntR family HRD70_07290 PF07702 UTRA domain HRD70_07300 PF13597 Anaerobic ribonucleoside-triphosphate reductase HRD70_07300 PF03477 ATP cone domain HRD70_07310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRD70_07310 PF00005 ABC transporter HRD70_07315 PF00005 ABC transporter HRD70_07315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRD70_07325 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_07335 PF04074 YhcH/YjgK/YiaL HRD70_07340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRD70_07340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRD70_07345 PF06877 Regulator of ribonuclease activity B HRD70_07350 PF00583 Acetyltransferase (GNAT) family HRD70_07355 PF00133 tRNA synthetases class I (I, L, M and V) HRD70_07355 PF10458 Valyl tRNA synthetase tRNA binding arm HRD70_07355 PF08264 Anticodon-binding domain of tRNA HRD70_07360 PF04364 DNA polymerase III chi subunit, HolC HRD70_07365 PF02789 Cytosol aminopeptidase family, N-terminal domain HRD70_07365 PF00883 Cytosol aminopeptidase family, catalytic domain HRD70_07370 PF03739 Lipopolysaccharide export system permease LptF/LptG HRD70_07375 PF03739 Lipopolysaccharide export system permease LptF/LptG HRD70_07385 PF13356 Arm DNA-binding domain HRD70_07385 PF00589 Phage integrase family HRD70_07395 PF08676 MutL C terminal dimerisation domain HRD70_07395 PF01119 DNA mismatch repair protein, C-terminal domain HRD70_07410 PF10544 T5orf172 domain HRD70_07475 PF06067 Domain of unknown function (DUF932) HRD70_07480 PF03230 Antirestriction protein HRD70_07485 PF06755 CbtA_toxin of type IV toxin-antitoxin system HRD70_07490 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HRD70_07505 PF03466 LysR substrate binding domain HRD70_07505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_07510 PF00107 Zinc-binding dehydrogenase HRD70_07510 PF08240 Alcohol dehydrogenase GroES-like domain HRD70_07515 PF00583 Acetyltransferase (GNAT) family HRD70_07530 PF00440 Bacterial regulatory proteins, tetR family HRD70_07535 PF02525 Flavodoxin-like fold HRD70_07550 PF03466 LysR substrate binding domain HRD70_07550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_07565 PF10696 Protein of unknown function (DUF2501) HRD70_07575 PF03992 Antibiotic biosynthesis monooxygenase HRD70_07580 PF01791 DeoC/LacD family aldolase HRD70_07585 PF13407 Periplasmic binding protein domain HRD70_07590 PF02653 Branched-chain amino acid transport system / permease component HRD70_07595 PF02653 Branched-chain amino acid transport system / permease component HRD70_07600 PF00005 ABC transporter HRD70_07605 PF04198 Putative sugar-binding domain HRD70_07605 PF00325 Bacterial regulatory proteins, crp family HRD70_07610 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRD70_07610 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRD70_07615 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HRD70_07625 PF13520 Amino acid permease HRD70_07640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRD70_07645 PF00873 AcrB/AcrD/AcrF family HRD70_07650 PF00465 Iron-containing alcohol dehydrogenase HRD70_07655 PF02733 Dak1 domain HRD70_07660 PF02734 DAK2 domain HRD70_07665 PF03610 PTS system fructose IIA component HRD70_07665 PF05524 PEP-utilising enzyme, N-terminal HRD70_07665 PF00391 PEP-utilising enzyme, mobile domain HRD70_07665 PF00381 PTS HPr component phosphorylation site HRD70_07675 PF02543 Carbamoyltransferase N-terminus HRD70_07675 PF16861 Carbamoyltransferase C-terminus HRD70_07700 PF02954 Bacterial regulatory protein, Fis family HRD70_07700 PF00989 PAS fold HRD70_07700 PF00158 Sigma-54 interaction domain HRD70_07710 PF07660 Secretin and TonB N terminus short domain HRD70_07710 PF00593 TonB dependent receptor HRD70_07710 PF07715 TonB-dependent Receptor Plug Domain HRD70_07715 PF00990 Diguanylate cyclase, GGDEF domain HRD70_07720 PF07256 Protein of unknown function (DUF1435) HRD70_07735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_07735 PF03466 LysR substrate binding domain HRD70_07740 PF00248 Aldo/keto reductase family HRD70_07745 PF08468 Methyltransferase small domain N-terminal HRD70_07745 PF05175 Methyltransferase small domain HRD70_07760 PF03603 DNA polymerase III psi subunit HRD70_07765 PF00583 Acetyltransferase (GNAT) family HRD70_07770 PF16658 Class II release factor RF3, C-terminal domain HRD70_07770 PF03144 Elongation factor Tu domain 2 HRD70_07770 PF00009 Elongation factor Tu GTP binding domain HRD70_07775 PF04972 BON domain HRD70_07780 PF07043 Protein of unknown function (DUF1328) HRD70_07785 PF01734 Patatin-like phospholipase HRD70_07790 PF01026 TatD related DNase HRD70_07795 PF07670 Nucleoside recognition HRD70_07795 PF01773 Na+ dependent nucleoside transporter N-terminus HRD70_07795 PF07662 Na+ dependent nucleoside transporter C-terminus HRD70_07800 PF01791 DeoC/LacD family aldolase HRD70_07805 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HRD70_07805 PF00591 Glycosyl transferase family, a/b domain HRD70_07805 PF02885 Glycosyl transferase family, helical bundle domain HRD70_07810 PF01676 Metalloenzyme superfamily HRD70_07815 PF01048 Phosphorylase superfamily HRD70_07820 PF07804 HipA-like C-terminal domain HRD70_07825 PF10144 Bacterial virulence factor haemolysin HRD70_07830 PF18429 Domain of unknown function (DUF5609) HRD70_07835 PF18073 Rubredoxin metal binding domain HRD70_07850 PF01381 Helix-turn-helix HRD70_07850 PF13521 AAA domain HRD70_07855 PF00107 Zinc-binding dehydrogenase HRD70_07855 PF08240 Alcohol dehydrogenase GroES-like domain HRD70_07860 PF03466 LysR substrate binding domain HRD70_07860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_07865 PF00005 ABC transporter HRD70_07865 PF12848 ABC transporter HRD70_07870 PF00691 OmpA family HRD70_07875 PF00990 Diguanylate cyclase, GGDEF domain HRD70_07875 PF17152 Periplasmic sensor domain HRD70_07880 PF13689 YfiR/HmsC-like HRD70_07885 PF00690 Cation transporter/ATPase, N-terminus HRD70_07885 PF00689 Cation transporting ATPase, C-terminus HRD70_07890 PF14718 Soluble lytic murein transglycosylase L domain HRD70_07890 PF01464 Transglycosylase SLT domain HRD70_07895 PF01371 Trp repressor protein HRD70_07900 PF01931 Protein of unknown function DUF84 HRD70_07905 PF00300 Histidine phosphatase superfamily (branch 1) HRD70_07910 PF12833 Helix-turn-helix domain HRD70_07910 PF06445 GyrI-like small molecule binding domain HRD70_07915 PF05981 CreA protein HRD70_07920 PF00486 Transcriptional regulatory protein, C terminal HRD70_07920 PF00072 Response regulator receiver domain HRD70_07925 PF08254 Threonine leader peptide HRD70_07930 PF00696 Amino acid kinase family HRD70_07930 PF00742 Homoserine dehydrogenase HRD70_07930 PF13840 ACT domain HRD70_07930 PF01842 ACT domain HRD70_07930 PF03447 Homoserine dehydrogenase, NAD binding domain HRD70_07935 PF00288 GHMP kinases N terminal domain HRD70_07935 PF08544 GHMP kinases C terminal HRD70_07940 PF14821 Threonine synthase N terminus HRD70_07940 PF00291 Pyridoxal-phosphate dependent enzyme HRD70_07945 PF03883 Peroxide stress protein YaaA HRD70_07950 PF00923 Transaldolase/Fructose-6-phosphate aldolase HRD70_07955 PF00994 Probable molybdopterin binding domain HRD70_07960 PF07690 Major Facilitator Superfamily HRD70_07970 PF01184 GPR1/FUN34/yaaH family HRD70_07975 PF00012 Hsp70 protein HRD70_07980 PF01556 DnaJ C terminal domain HRD70_07980 PF00226 DnaJ domain HRD70_07980 PF00684 DnaJ central domain HRD70_07985 PF06965 Na+/H+ antiporter 1 HRD70_07990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_07990 PF03466 LysR substrate binding domain HRD70_07995 PF01649 Ribosomal protein S20 HRD70_08010 PF06574 FAD synthetase HRD70_08010 PF01687 Riboflavin kinase HRD70_08015 PF08264 Anticodon-binding domain of tRNA HRD70_08015 PF06827 Zinc finger found in FPG and IleRS HRD70_08015 PF00133 tRNA synthetases class I (I, L, M and V) HRD70_08020 PF01252 Signal peptidase (SPase) II HRD70_08025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRD70_08030 PF02401 LytB protein HRD70_08035 PF05173 Dihydrodipicolinate reductase, C-terminus HRD70_08035 PF01113 Dihydrodipicolinate reductase, N-terminus HRD70_08040 PF00117 Glutamine amidotransferase class-I HRD70_08040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HRD70_08045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HRD70_08045 PF02142 MGS-like domain HRD70_08045 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HRD70_08050 PF01810 LysE type translocator HRD70_08055 PF06738 Putative threonine/serine exporter HRD70_08060 PF12821 Threonine/Serine exporter, ThrE HRD70_08065 PF00186 Dihydrofolate reductase HRD70_08070 PF00149 Calcineurin-like phosphoesterase HRD70_08075 PF04379 ApaG domain HRD70_08080 PF00398 Ribosomal RNA adenine dimethylase HRD70_08085 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HRD70_08090 PF09312 SurA N-terminal domain HRD70_08090 PF00639 PPIC-type PPIASE domain HRD70_08095 PF03968 OstA-like protein HRD70_08095 PF04453 LPS transport system D HRD70_08100 PF00226 DnaJ domain HRD70_08100 PF05099 Tellurite resistance protein TerB HRD70_08105 PF00849 RNA pseudouridylate synthase HRD70_08110 PF18337 RapA N-terminal Tudor like domain HRD70_08110 PF00271 Helicase conserved C-terminal domain HRD70_08110 PF00176 SNF2 family N-terminal domain HRD70_08110 PF18339 RapA N-terminal Tudor like domain 1 HRD70_08110 PF12137 RNA polymerase recycling family C-terminal HRD70_08115 PF03104 DNA polymerase family B, exonuclease domain HRD70_08115 PF00136 DNA polymerase family B HRD70_08120 PF09335 SNARE associated Golgi protein HRD70_08125 PF00005 ABC transporter HRD70_08130 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_08145 PF12793 Sugar transport-related sRNA regulator N-term HRD70_08145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRD70_08150 PF04055 Radical SAM superfamily HRD70_08155 PF01228 Glycine radical HRD70_08155 PF02901 Pyruvate formate lyase-like HRD70_08160 PF07690 Major Facilitator Superfamily HRD70_08165 PF01212 Beta-eliminating lyase HRD70_08175 PF00694 Aconitase C-terminal domain HRD70_08180 PF00330 Aconitase family (aconitate hydratase) HRD70_08185 PF00180 Isocitrate/isopropylmalate dehydrogenase HRD70_08190 PF08502 LeuA allosteric (dimerisation) domain HRD70_08190 PF00682 HMGL-like HRD70_08200 PF03466 LysR substrate binding domain HRD70_08200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_08205 PF00501 AMP-binding enzyme HRD70_08210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRD70_08210 PF00205 Thiamine pyrophosphate enzyme, central domain HRD70_08210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRD70_08215 PF10369 Small subunit of acetolactate synthase HRD70_08220 PF00356 Bacterial regulatory proteins, lacI family HRD70_08220 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HRD70_08225 PF06610 L-alanine exporter HRD70_08230 PF02381 MraZ protein, putative antitoxin-like HRD70_08235 PF01795 MraW methylase family HRD70_08240 PF04999 Cell division protein FtsL HRD70_08245 PF03717 Penicillin-binding Protein dimerisation domain HRD70_08245 PF00905 Penicillin binding protein transpeptidase domain HRD70_08250 PF08245 Mur ligase middle domain HRD70_08250 PF01225 Mur ligase family, catalytic domain HRD70_08250 PF02875 Mur ligase family, glutamate ligase domain HRD70_08255 PF08245 Mur ligase middle domain HRD70_08255 PF01225 Mur ligase family, catalytic domain HRD70_08255 PF02875 Mur ligase family, glutamate ligase domain HRD70_08260 PF00953 Glycosyl transferase family 4 HRD70_08260 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HRD70_08265 PF02875 Mur ligase family, glutamate ligase domain HRD70_08265 PF08245 Mur ligase middle domain HRD70_08270 PF01098 Cell cycle protein HRD70_08275 PF03033 Glycosyltransferase family 28 N-terminal domain HRD70_08275 PF04101 Glycosyltransferase family 28 C-terminal domain HRD70_08280 PF02875 Mur ligase family, glutamate ligase domain HRD70_08280 PF08245 Mur ligase middle domain HRD70_08280 PF01225 Mur ligase family, catalytic domain HRD70_08285 PF01820 D-ala D-ala ligase N-terminus HRD70_08285 PF07478 D-ala D-ala ligase C-terminus HRD70_08290 PF03799 Cell division protein FtsQ HRD70_08290 PF08478 POTRA domain, FtsQ-type HRD70_08295 PF02491 SHS2 domain inserted in FTSA HRD70_08300 PF12327 FtsZ family, C-terminal domain HRD70_08300 PF00091 Tubulin/FtsZ family, GTPase domain HRD70_08305 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HRD70_08315 PF06558 Secretion monitor precursor protein (SecM) HRD70_08320 PF07517 SecA DEAD-like domain HRD70_08320 PF07516 SecA Wing and Scaffold domain HRD70_08320 PF02810 SEC-C motif HRD70_08320 PF01043 SecA preprotein cross-linking domain HRD70_08325 PF00293 NUDIX domain HRD70_08330 PF03884 DNA gyrase inhibitor YacG HRD70_08335 PF07072 Cell division protein HRD70_08340 PF01121 Dephospho-CoA kinase HRD70_08345 PF00478 IMP dehydrogenase / GMP reductase domain HRD70_08350 PF00482 Type II secretion system (T2SS), protein F HRD70_08355 PF00437 Type II/IV secretion system protein HRD70_08355 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HRD70_08360 PF07963 Prokaryotic N-terminal methylation motif HRD70_08365 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HRD70_08365 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HRD70_08370 PF01510 N-acetylmuramoyl-L-alanine amidase HRD70_08375 PF17113 Regulatory signalling modulator protein AmpE HRD70_08380 PF00324 Amino acid permease HRD70_08385 PF07729 FCD domain HRD70_08385 PF00392 Bacterial regulatory proteins, gntR family HRD70_08390 PF17831 Pyruvate dehydrogenase E1 component middle domain HRD70_08390 PF00456 Transketolase, thiamine diphosphate binding domain HRD70_08395 PF00364 Biotin-requiring enzyme HRD70_08395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HRD70_08395 PF02817 e3 binding domain HRD70_08400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRD70_08400 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRD70_08415 PF00593 TonB dependent receptor HRD70_08415 PF07715 TonB-dependent Receptor Plug Domain HRD70_08420 PF06434 Aconitate hydratase 2 N-terminus HRD70_08420 PF11791 Aconitate B N-terminal domain HRD70_08420 PF00330 Aconitase family (aconitate hydratase) HRD70_08425 PF06062 Uncharacterised protein family (UPF0231) HRD70_08430 PF00892 EamA-like transporter family HRD70_08445 PF02675 S-adenosylmethionine decarboxylase HRD70_08450 PF17284 Spermidine synthase tetramerisation domain HRD70_08455 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) HRD70_08460 PF10518 TAT (twin-arginine translocation) pathway signal sequence HRD70_08460 PF07731 Multicopper oxidase HRD70_08460 PF00394 Multicopper oxidase HRD70_08460 PF07732 Multicopper oxidase HRD70_08470 PF00156 Phosphoribosyl transferase domain HRD70_08475 PF00484 Carbonic anhydrase HRD70_08480 PF00005 ABC transporter HRD70_08485 PF01061 ABC-2 type transporter HRD70_08490 PF01522 Polysaccharide deacetylase HRD70_08495 PF02261 Aspartate decarboxylase HRD70_08500 PF02569 Pantoate-beta-alanine ligase HRD70_08505 PF02548 Ketopantoate hydroxymethyltransferase HRD70_08510 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HRD70_08515 PF12626 Polymerase A arginine-rich C-terminus HRD70_08515 PF01743 Poly A polymerase head domain HRD70_08515 PF12627 Probable RNA and SrmB- binding site of polymerase A HRD70_08520 PF00749 tRNA synthetases class I (E and Q), catalytic domain HRD70_08525 PF01258 Prokaryotic dksA/traR C4-type zinc finger HRD70_08530 PF03749 Sugar fermentation stimulation protein RE domain HRD70_08530 PF17746 SfsA N-terminal OB domain HRD70_08535 PF02834 LigT like Phosphoesterase HRD70_08540 PF00271 Helicase conserved C-terminal domain HRD70_08540 PF00270 DEAD/DEAH box helicase HRD70_08540 PF04408 Helicase associated domain (HA2) HRD70_08540 PF08482 ATP-dependent helicase C-terminal HRD70_08545 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal HRD70_08545 PF00905 Penicillin binding protein transpeptidase domain HRD70_08545 PF14814 Bifunctional transglycosylase second domain HRD70_08545 PF00912 Transglycosylase HRD70_08550 PF00005 ABC transporter HRD70_08555 PF01497 Periplasmic binding protein HRD70_08560 PF01032 FecCD transport family HRD70_08570 PF00202 Aminotransferase class-III HRD70_08575 PF00654 Voltage gated chloride channel HRD70_08580 PF01521 Iron-sulphur cluster biosynthesis HRD70_08590 PF03458 UPF0126 domain HRD70_08595 PF01497 Periplasmic binding protein HRD70_08600 PF01048 Phosphorylase superfamily HRD70_08605 PF01966 HD domain HRD70_08605 PF13286 Phosphohydrolase-associated domain HRD70_08610 PF00595 PDZ domain HRD70_08615 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HRD70_08615 PF01627 Hpt domain HRD70_08615 PF00512 His Kinase A (phospho-acceptor) domain HRD70_08615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_08615 PF00672 HAMP domain HRD70_08615 PF00072 Response regulator receiver domain HRD70_08625 PF13291 ACT domain HRD70_08625 PF04607 Region found in RelA / SpoT proteins HRD70_08625 PF02824 TGS domain HRD70_08630 PF03819 MazG nucleotide pyrophosphohydrolase domain HRD70_08635 PF00117 Glutamine amidotransferase class-I HRD70_08635 PF06418 CTP synthase N-terminus HRD70_08640 PF03952 Enolase, N-terminal domain HRD70_08640 PF00113 Enolase, C-terminal TIM barrel domain HRD70_08655 PF01053 Cys/Met metabolism PLP-dependent enzyme HRD70_08660 PF00080 Copper/zinc superoxide dismutase (SODC) HRD70_08665 PF04055 Radical SAM superfamily HRD70_08670 PF01242 6-pyruvoyl tetrahydropterin synthase HRD70_08675 PF00175 Oxidoreductase NAD-binding domain HRD70_08675 PF00667 FAD binding domain HRD70_08675 PF00258 Flavodoxin HRD70_08680 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HRD70_08680 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HRD70_08685 PF01507 Phosphoadenosine phosphosulfate reductase family HRD70_08690 PF04389 Peptidase family M28 HRD70_08695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRD70_08695 PF14824 Sirohaem biosynthesis protein central HRD70_08695 PF10414 Sirohaem synthase dimerisation region HRD70_08700 PF01507 Phosphoadenosine phosphosulfate reductase family HRD70_08705 PF00009 Elongation factor Tu GTP binding domain HRD70_08715 PF12084 Protein of unknown function (DUF3561) HRD70_08720 PF00005 ABC transporter HRD70_08725 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_08730 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRD70_08735 PF04977 Septum formation initiator HRD70_08740 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HRD70_08745 PF02542 YgbB family HRD70_08750 PF01142 tRNA pseudouridine synthase D (TruD) HRD70_08755 PF01975 Survival protein SurE HRD70_08765 PF01551 Peptidase family M23 HRD70_08765 PF01476 LysM domain HRD70_08770 PF04542 Sigma-70 region 2 HRD70_08770 PF04539 Sigma-70 region 3 HRD70_08770 PF04545 Sigma-70, region 4 HRD70_08770 PF00140 Sigma-70 factor, region 1.2 HRD70_08775 PF05188 MutS domain II HRD70_08775 PF05192 MutS domain III HRD70_08775 PF00488 MutS domain V HRD70_08775 PF05190 MutS family domain IV HRD70_08775 PF01624 MutS domain I HRD70_08790 PF00419 Fimbrial protein HRD70_08795 PF00419 Fimbrial protein HRD70_08800 PF13954 PapC N-terminal domain HRD70_08800 PF13953 PapC C-terminal domain HRD70_08800 PF00577 Outer membrane usher protein HRD70_08805 PF02753 Pili assembly chaperone PapD, C-terminal domain HRD70_08805 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HRD70_08820 PF00419 Fimbrial protein HRD70_08825 PF00419 Fimbrial protein HRD70_08850 PF00005 ABC transporter HRD70_08850 PF03412 Peptidase C39 family HRD70_08850 PF00664 ABC transporter transmembrane region HRD70_08855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRD70_08860 PF00005 ABC transporter HRD70_08860 PF02687 FtsX-like permease family HRD70_08860 PF12704 MacB-like periplasmic core domain HRD70_08865 PF02321 Outer membrane efflux protein HRD70_08870 PF00109 Beta-ketoacyl synthase, N-terminal domain HRD70_08870 PF02801 Beta-ketoacyl synthase, C-terminal domain HRD70_08890 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRD70_08895 PF13018 Extended Signal Peptide of Type V secretion system HRD70_08895 PF03212 Pertactin HRD70_08895 PF16168 Adhesin of bacterial autotransporter system, probable stalk HRD70_08895 PF03797 Autotransporter beta-domain HRD70_08900 PF14376 Haem-binding domain HRD70_08900 PF03150 Di-haem cytochrome c peroxidase HRD70_08900 PF00034 Cytochrome c HRD70_08915 PF00291 Pyridoxal-phosphate dependent enzyme HRD70_08920 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRD70_08925 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_08930 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_08935 PF00005 ABC transporter HRD70_08940 PF01546 Peptidase family M20/M25/M40 HRD70_08945 PF09347 Domain of unknown function (DUF1989) HRD70_08960 PF03144 Elongation factor Tu domain 2 HRD70_08960 PF00009 Elongation factor Tu GTP binding domain HRD70_08960 PF03764 Elongation factor G, domain IV HRD70_08960 PF14492 Elongation Factor G, domain II HRD70_08960 PF00679 Elongation factor G C-terminus HRD70_08965 PF01022 Bacterial regulatory protein, arsR family HRD70_08970 PF08240 Alcohol dehydrogenase GroES-like domain HRD70_08970 PF00107 Zinc-binding dehydrogenase HRD70_08975 PF03613 PTS system mannose/fructose/sorbose family IID component HRD70_08980 PF03609 PTS system sorbose-specific iic component HRD70_08985 PF03830 PTS system sorbose subfamily IIB component HRD70_08990 PF03610 PTS system fructose IIA component HRD70_08995 PF00106 short chain dehydrogenase HRD70_09000 PF13936 Helix-turn-helix domain HRD70_09000 PF04198 Putative sugar-binding domain HRD70_09005 PF00795 Carbon-nitrogen hydrolase HRD70_09025 PF00005 ABC transporter HRD70_09030 PF00005 ABC transporter HRD70_09035 PF11862 Domain of unknown function (DUF3382) HRD70_09035 PF02653 Branched-chain amino acid transport system / permease component HRD70_09040 PF02653 Branched-chain amino acid transport system / permease component HRD70_09045 PF13458 Periplasmic binding protein HRD70_09050 PF05681 Fumarate hydratase (Fumerase) HRD70_09050 PF05683 Fumarase C-terminus HRD70_09055 PF08220 DeoR-like helix-turn-helix domain HRD70_09055 PF00455 DeoR C terminal sensor domain HRD70_09060 PF05025 RbsD / FucU transport protein family HRD70_09065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRD70_09065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRD70_09070 PF02952 L-fucose isomerase, C-terminal domain HRD70_09070 PF07881 L-fucose isomerase, first N-terminal domain HRD70_09070 PF07882 L-fucose isomerase, second N-terminal domain HRD70_09075 PF07690 Major Facilitator Superfamily HRD70_09080 PF00596 Class II Aldolase and Adducin N-terminal domain HRD70_09085 PF00465 Iron-containing alcohol dehydrogenase HRD70_09090 PF01568 Molydopterin dinucleotide binding domain HRD70_09090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRD70_09090 PF00384 Molybdopterin oxidoreductase HRD70_09095 PF12800 4Fe-4S binding domain HRD70_09095 PF13247 4Fe-4S dicluster domain HRD70_09100 PF04976 DMSO reductase anchor subunit (DmsC) HRD70_09105 PF02613 Nitrate reductase delta subunit HRD70_09110 PF07690 Major Facilitator Superfamily HRD70_09115 PF02464 Competence-damaged protein HRD70_09120 PF00154 recA bacterial DNA recombination protein HRD70_09125 PF02631 RecX family HRD70_09130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HRD70_09130 PF01411 tRNA synthetases class II (A) HRD70_09130 PF02272 DHHA1 domain HRD70_09135 PF02599 Global regulator protein family HRD70_09160 PF13419 Haloacid dehalogenase-like hydrolase HRD70_09165 PF09335 SNARE associated Golgi protein HRD70_09170 PF04262 Glutamate-cysteine ligase HRD70_09175 PF02664 S-Ribosylhomocysteinase (LuxS) HRD70_09180 PF03471 Transporter associated domain HRD70_09180 PF00571 CBS domain HRD70_09180 PF01595 Cyclin M transmembrane N-terminal domain HRD70_09185 PF01578 Cytochrome C assembly protein HRD70_09190 PF00448 SRP54-type protein, GTPase domain HRD70_09190 PF02881 SRP54-type protein, helical bundle domain HRD70_09190 PF02978 Signal peptide binding domain HRD70_09195 PF00886 Ribosomal protein S16 HRD70_09200 PF05239 PRC-barrel domain HRD70_09200 PF01782 RimM N-terminal domain HRD70_09205 PF01746 tRNA (Guanine-1)-methyltransferase HRD70_09210 PF01245 Ribosomal protein L19 HRD70_09215 PF04338 Protein of unknown function, DUF481 HRD70_09220 PF03605 Anaerobic c4-dicarboxylate membrane transporter HRD70_09225 PF04397 LytTr DNA-binding domain HRD70_09225 PF00072 Response regulator receiver domain HRD70_09230 PF00793 DAHP synthetase I family HRD70_09235 PF02153 Prephenate dehydrogenase HRD70_09235 PF01817 Chorismate mutase type II HRD70_09240 PF01817 Chorismate mutase type II HRD70_09240 PF00800 Prephenate dehydratase HRD70_09245 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HRD70_09250 PF13525 Outer membrane lipoprotein HRD70_09255 PF01479 S4 domain HRD70_09255 PF00849 RNA pseudouridylate synthase HRD70_09265 PF10431 C-terminal, D2-small domain, of ClpB protein HRD70_09265 PF00004 ATPase family associated with various cellular activities (AAA) HRD70_09265 PF02861 Clp amino terminal domain, pathogenicity island component HRD70_09265 PF17871 AAA lid domain HRD70_09265 PF07724 AAA domain (Cdc48 subfamily) HRD70_09295 PF00248 Aldo/keto reductase family HRD70_09300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_09300 PF03466 LysR substrate binding domain HRD70_09305 PF07690 Major Facilitator Superfamily HRD70_09310 PF03372 Endonuclease/Exonuclease/phosphatase family HRD70_09315 PF01476 LysM domain HRD70_09315 PF01464 Transglycosylase SLT domain HRD70_09320 PF16123 Hydroxyacylglutathione hydrolase C-terminus HRD70_09320 PF00753 Metallo-beta-lactamase superfamily HRD70_09325 PF08241 Methyltransferase domain HRD70_09330 PF00075 RNase H HRD70_09335 PF00929 Exonuclease HRD70_09345 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HRD70_09355 PF01177 Asp/Glu/Hydantoin racemase HRD70_09365 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HRD70_09370 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_09375 PF00005 ABC transporter HRD70_09375 PF00571 CBS domain HRD70_09380 PF00268 Ribonucleotide reductase, small chain HRD70_09385 PF08343 Ribonucleotide reductase N-terminal HRD70_09385 PF00317 Ribonucleotide reductase, all-alpha domain HRD70_09385 PF02867 Ribonucleotide reductase, barrel domain HRD70_09390 PF07972 NrdI Flavodoxin like HRD70_09395 PF00462 Glutaredoxin HRD70_09400 PF02627 Carboxymuconolactone decarboxylase family HRD70_09405 PF00155 Aminotransferase class I and II HRD70_09405 PF00392 Bacterial regulatory proteins, gntR family HRD70_09410 PF05957 Bacterial protein of unknown function (DUF883) HRD70_09415 PF06392 Acid shock protein repeat HRD70_09420 PF07690 Major Facilitator Superfamily HRD70_09425 PF09400 Protein of unknown function (DUF2002) HRD70_09430 PF06711 Protein of unknown function (DUF1198) HRD70_09440 PF00313 'Cold-shock' DNA-binding domain HRD70_09445 PF01965 DJ-1/PfpI family HRD70_09460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRD70_09465 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_09470 PF12911 N-terminal TM domain of oligopeptide transport permease C HRD70_09470 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_09475 PF00005 ABC transporter HRD70_09480 PF00005 ABC transporter HRD70_09485 PF00547 Urease, gamma subunit HRD70_09490 PF00699 Urease beta subunit HRD70_09495 PF00449 Urease alpha-subunit, N-terminal domain HRD70_09495 PF01979 Amidohydrolase family HRD70_09500 PF02814 UreE urease accessory protein, N-terminal domain HRD70_09500 PF05194 UreE urease accessory protein, C-terminal domain HRD70_09505 PF01730 UreF HRD70_09510 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRD70_09515 PF01774 UreD urease accessory protein HRD70_09520 PF03253 Urea transporter HRD70_09525 PF03824 High-affinity nickel-transport protein HRD70_09530 PF06411 HdeA/HdeB family HRD70_09535 PF07885 Ion channel HRD70_09535 PF02254 TrkA-N domain HRD70_09540 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HRD70_09545 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HRD70_09550 PF00248 Aldo/keto reductase family HRD70_09555 PF07995 Glucose / Sorbosone dehydrogenase HRD70_09560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HRD70_09565 PF02378 Phosphotransferase system, EIIC HRD70_09570 PF00232 Glycosyl hydrolase family 1 HRD70_09575 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HRD70_09580 PF07883 Cupin domain HRD70_09580 PF12833 Helix-turn-helix domain HRD70_09585 PF04794 YdjC-like protein HRD70_09590 PF01810 LysE type translocator HRD70_09595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_09595 PF03466 LysR substrate binding domain HRD70_09605 PF03781 Sulfatase-modifying factor enzyme 1 HRD70_09615 PF02687 FtsX-like permease family HRD70_09615 PF12704 MacB-like periplasmic core domain HRD70_09615 PF00005 ABC transporter HRD70_09645 PF02342 TerD domain HRD70_09660 PF03466 LysR substrate binding domain HRD70_09660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_09665 PF00583 Acetyltransferase (GNAT) family HRD70_09675 PF06755 CbtA_toxin of type IV toxin-antitoxin system HRD70_09680 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HRD70_09685 PF04002 RadC-like JAB domain HRD70_09690 PF06067 Domain of unknown function (DUF932) HRD70_09720 PF13148 Protein of unknown function (DUF3987) HRD70_09725 PF05930 Prophage CP4-57 regulatory protein (AlpA) HRD70_09730 PF01527 Transposase HRD70_09755 PF01048 Phosphorylase superfamily HRD70_09760 PF13356 Arm DNA-binding domain HRD70_09760 PF00589 Phage integrase family HRD70_09770 PF01668 SmpB protein HRD70_09775 PF03364 Polyketide cyclase / dehydrase and lipid transport HRD70_09780 PF03658 RnfH family Ubiquitin HRD70_09785 PF04355 SmpA / OmlA family HRD70_09790 PF02463 RecF/RecN/SMC N terminal domain HRD70_09795 PF01513 ATP-NAD kinase HRD70_09800 PF01025 GrpE HRD70_09805 PF03167 Uracil DNA glycosylase superfamily HRD70_09810 PF01228 Glycine radical HRD70_09825 PF12796 Ankyrin repeats (3 copies) HRD70_09830 PF00271 Helicase conserved C-terminal domain HRD70_09830 PF00270 DEAD/DEAH box helicase HRD70_09835 PF05175 Methyltransferase small domain HRD70_09840 PF02910 Fumarate reductase flavoprotein C-term HRD70_09840 PF00890 FAD binding domain HRD70_09845 PF04542 Sigma-70 region 2 HRD70_09845 PF08281 Sigma-70, region 4 HRD70_09850 PF03872 Anti sigma-E protein RseA, N-terminal domain HRD70_09850 PF03873 Anti sigma-E protein RseA, C-terminal domain HRD70_09855 PF17188 MucB/RseB C-terminal domain HRD70_09855 PF03888 MucB/RseB N-terminal domain HRD70_09870 PF06421 GTP-binding protein LepA C-terminus HRD70_09870 PF03144 Elongation factor Tu domain 2 HRD70_09870 PF00009 Elongation factor Tu GTP binding domain HRD70_09870 PF00679 Elongation factor G C-terminus HRD70_09875 PF10502 Signal peptidase, peptidase S26 HRD70_09880 PF00035 Double-stranded RNA binding motif HRD70_09880 PF14622 Ribonuclease-III-like HRD70_09885 PF01926 50S ribosome-binding GTPase HRD70_09885 PF07650 KH domain HRD70_09890 PF02565 Recombination protein O C terminal HRD70_09890 PF11967 Recombination protein O N terminal HRD70_09895 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HRD70_09900 PF01648 4'-phosphopantetheinyl transferase superfamily HRD70_09905 PF02447 GntP family permease HRD70_09910 PF12838 4Fe-4S dicluster domain HRD70_09915 PF01418 Helix-turn-helix domain, rpiR family HRD70_09915 PF01380 SIS domain HRD70_09920 PF01380 SIS domain HRD70_09935 PF14437 MafB19-like deaminase HRD70_09940 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRD70_09940 PF01464 Transglycosylase SLT domain HRD70_09945 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HRD70_09945 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HRD70_09945 PF02769 AIR synthase related protein, C-terminal domain HRD70_09955 PF00512 His Kinase A (phospho-acceptor) domain HRD70_09955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_09960 PF13942 YfhG lipoprotein HRD70_09965 PF00158 Sigma-54 interaction domain HRD70_09965 PF00072 Response regulator receiver domain HRD70_09970 PF00795 Carbon-nitrogen hydrolase HRD70_09970 PF02540 NAD synthase HRD70_09975 PF00543 Nitrogen regulatory protein P-II HRD70_09985 PF14502 Helix-turn-helix domain HRD70_09985 PF14503 YhfZ C-terminal domain HRD70_09990 PF00175 Oxidoreductase NAD-binding domain HRD70_09990 PF00970 Oxidoreductase FAD-binding domain HRD70_09990 PF00042 Globin HRD70_09995 PF00464 Serine hydroxymethyltransferase HRD70_10000 PF12832 MFS_1 like family HRD70_10005 PF00874 PRD domain HRD70_10010 PF06226 Protein of unknown function (DUF1007) HRD70_10015 PF03824 High-affinity nickel-transport protein HRD70_10020 PF00459 Inositol monophosphatase family HRD70_10025 PF00588 SpoU rRNA Methylase family HRD70_10030 PF02082 Transcriptional regulator HRD70_10035 PF00266 Aminotransferase class-V HRD70_10040 PF01592 NifU-like N terminal domain HRD70_10045 PF01521 Iron-sulphur cluster biosynthesis HRD70_10050 PF07743 HSCB C-terminal oligomerisation domain HRD70_10050 PF00226 DnaJ domain HRD70_10055 PF00012 Hsp70 protein HRD70_10060 PF00111 2Fe-2S iron-sulfur cluster binding domain HRD70_10065 PF04384 Iron-sulphur cluster assembly HRD70_10070 PF00883 Cytosol aminopeptidase family, catalytic domain HRD70_10070 PF12404 Peptidase HRD70_10075 PF07179 SseB protein N-terminal domain HRD70_10075 PF14581 SseB protein C-terminal domain HRD70_10080 PF03212 Pertactin HRD70_10080 PF16168 Adhesin of bacterial autotransporter system, probable stalk HRD70_10080 PF03797 Autotransporter beta-domain HRD70_10085 PF00207 Alpha-2-macroglobulin family HRD70_10085 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain HRD70_10085 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain HRD70_10085 PF17962 Bacterial macroglobulin domain 6 HRD70_10085 PF07703 Alpha-2-macroglobulin bait region domain HRD70_10085 PF01835 MG2 domain HRD70_10085 PF11974 Bacterial alpha-2-macroglobulin MG3 domain HRD70_10085 PF07678 A-macroglobulin TED domain HRD70_10085 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HRD70_10090 PF00912 Transglycosylase HRD70_10090 PF06832 Penicillin-Binding Protein C-terminus Family HRD70_10090 PF00905 Penicillin binding protein transpeptidase domain HRD70_10100 PF00334 Nucleoside diphosphate kinase HRD70_10105 PF04055 Radical SAM superfamily HRD70_10115 PF13464 Domain of unknown function (DUF4115) HRD70_10120 PF04551 GcpE protein HRD70_10125 PF13393 Histidyl-tRNA synthetase HRD70_10125 PF03129 Anticodon binding domain HRD70_10130 PF09976 Tetratricopeptide repeat-like domain HRD70_10135 PF13360 PQQ-like domain HRD70_10140 PF01926 50S ribosome-binding GTPase HRD70_10140 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HRD70_10150 PF07191 zinc-ribbons HRD70_10155 PF02601 Exonuclease VII, large subunit HRD70_10155 PF13742 OB-fold nucleic acid binding domain HRD70_10160 PF00571 CBS domain HRD70_10160 PF00478 IMP dehydrogenase / GMP reductase domain HRD70_10165 PF00117 Glutamine amidotransferase class-I HRD70_10165 PF02540 NAD synthase HRD70_10165 PF00958 GMP synthase C terminal domain HRD70_10180 PF00732 GMC oxidoreductase HRD70_10180 PF05199 GMC oxidoreductase HRD70_10185 PF00034 Cytochrome c HRD70_10185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HRD70_10200 PF08543 Phosphomethylpyrimidine kinase HRD70_10215 PF01380 SIS domain HRD70_10215 PF00571 CBS domain HRD70_10220 PF08220 DeoR-like helix-turn-helix domain HRD70_10220 PF00455 DeoR C terminal sensor domain HRD70_10225 PF06923 Glucitol operon activator protein (GutM) HRD70_10230 PF00106 short chain dehydrogenase HRD70_10235 PF03829 PTS system glucitol/sorbitol-specific IIA component HRD70_10240 PF03612 Sorbitol phosphotransferase enzyme II N-terminus HRD70_10240 PF07663 Sorbitol phosphotransferase enzyme II C-terminus HRD70_10245 PF03608 PTS system enzyme II sorbitol-specific factor HRD70_10250 PF00781 Diacylglycerol kinase catalytic domain HRD70_10260 PF07411 Domain of unknown function (DUF1508) HRD70_10265 PF00486 Transcriptional regulatory protein, C terminal HRD70_10265 PF00072 Response regulator receiver domain HRD70_10270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_10270 PF00512 His Kinase A (phospho-acceptor) domain HRD70_10270 PF00672 HAMP domain HRD70_10275 PF07690 Major Facilitator Superfamily HRD70_10280 PF00873 AcrB/AcrD/AcrF family HRD70_10285 PF00873 AcrB/AcrD/AcrF family HRD70_10290 PF13533 Biotin-lipoyl like HRD70_10295 PF00012 Hsp70 protein HRD70_10300 PF08447 PAS fold HRD70_10300 PF08448 PAS fold HRD70_10300 PF13426 PAS domain HRD70_10300 PF00563 EAL domain HRD70_10300 PF00990 Diguanylate cyclase, GGDEF domain HRD70_10300 PF05231 MASE1 HRD70_10305 PF03448 MgtE intracellular N domain HRD70_10305 PF01769 Divalent cation transporter HRD70_10305 PF00571 CBS domain HRD70_10315 PF02541 Ppx/GppA phosphatase family HRD70_10320 PF17941 Polyphosphate kinase C-terminal domain 1 HRD70_10320 PF13090 Polyphosphate kinase C-terminal domain 2 HRD70_10320 PF13089 Polyphosphate kinase N-terminal domain HRD70_10320 PF02503 Polyphosphate kinase middle domain HRD70_10325 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_10330 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_10335 PF00005 ABC transporter HRD70_10345 PF13302 Acetyltransferase (GNAT) domain HRD70_10350 PF00551 Formyl transferase HRD70_10355 PF02769 AIR synthase related protein, C-terminal domain HRD70_10355 PF00586 AIR synthase related protein, N-terminal domain HRD70_10365 PF00860 Permease family HRD70_10370 PF00308 Bacterial dnaA protein HRD70_10375 PF03960 ArsC family HRD70_10380 PF07720 Tetratricopeptide repeat HRD70_10380 PF01435 Peptidase family M48 HRD70_10385 PF01594 AI-2E family transporter HRD70_10390 PF00578 AhpC/TSA family HRD70_10395 PF01842 ACT domain HRD70_10400 PF00701 Dihydrodipicolinate synthetase family HRD70_10405 PF06804 NlpB/DapX lipoprotein HRD70_10410 PF01259 SAICAR synthetase HRD70_10415 PF04228 Putative neutral zinc metallopeptidase HRD70_10420 PF04284 Protein of unknown function (DUF441) HRD70_10425 PF05127 Helicase HRD70_10425 PF13718 GNAT acetyltransferase 2 HRD70_10425 PF17176 tRNA-binding domain HRD70_10430 PF02230 Phospholipase/Carboxylesterase HRD70_10435 PF13980 Uncharacterised protein family (UPF0370) HRD70_10440 PF02557 D-alanyl-D-alanine carboxypeptidase HRD70_10445 PF01546 Peptidase family M20/M25/M40 HRD70_10445 PF07687 Peptidase dimerisation domain HRD70_10450 PF03960 ArsC family HRD70_10630 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_10635 PF00005 ABC transporter HRD70_10635 PF08402 TOBE domain HRD70_10645 PF00873 AcrB/AcrD/AcrF family HRD70_10655 PF00196 Bacterial regulatory proteins, luxR family HRD70_10655 PF00072 Response regulator receiver domain HRD70_10665 PF03927 NapD protein HRD70_10670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRD70_10670 PF01568 Molydopterin dinucleotide binding domain HRD70_10670 PF00384 Molybdopterin oxidoreductase HRD70_10670 PF10518 TAT (twin-arginine translocation) pathway signal sequence HRD70_10675 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HRD70_10680 PF03264 NapC/NirT cytochrome c family, N-terminal region HRD70_10685 PF00293 NUDIX domain HRD70_10690 PF00390 Malic enzyme, N-terminal domain HRD70_10690 PF01515 Phosphate acetyl/butaryl transferase HRD70_10690 PF03949 Malic enzyme, NAD binding domain HRD70_10695 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HRD70_10700 PF01218 Coproporphyrinogen III oxidase HRD70_10705 PF00583 Acetyltransferase (GNAT) family HRD70_10715 PF07690 Major Facilitator Superfamily HRD70_10720 PF13407 Periplasmic binding protein domain HRD70_10725 PF00005 ABC transporter HRD70_10730 PF02653 Branched-chain amino acid transport system / permease component HRD70_10740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HRD70_10740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HRD70_10745 PF00248 Aldo/keto reductase family HRD70_10750 PF00581 Rhodanese-like domain HRD70_10755 PF00106 short chain dehydrogenase HRD70_10765 PF04076 Bacterial OB fold (BOF) protein HRD70_10770 PF06572 Protein of unknown function (DUF1131) HRD70_10775 PF04261 Dyp-type peroxidase family HRD70_10780 PF00701 Dihydrodipicolinate synthetase family HRD70_10785 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HRD70_10790 PF00480 ROK family HRD70_10795 PF04074 YhcH/YjgK/YiaL HRD70_10800 PF01418 Helix-turn-helix domain, rpiR family HRD70_10800 PF01380 SIS domain HRD70_10805 PF07690 Major Facilitator Superfamily HRD70_10815 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_10820 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_10825 PF00005 ABC transporter HRD70_10830 PF00291 Pyridoxal-phosphate dependent enzyme HRD70_10835 PF12468 Type III secretion system leucine rich repeat protein HRD70_10845 PF02687 FtsX-like permease family HRD70_10845 PF12704 MacB-like periplasmic core domain HRD70_10845 PF00005 ABC transporter HRD70_10850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRD70_10855 PF00072 Response regulator receiver domain HRD70_10855 PF00486 Transcriptional regulatory protein, C terminal HRD70_10860 PF00672 HAMP domain HRD70_10860 PF00512 His Kinase A (phospho-acceptor) domain HRD70_10860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_10860 PF16527 Two-component sensor protein CpxA, periplasmic domain HRD70_10865 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HRD70_10870 PF02896 PEP-utilising enzyme, TIM barrel domain HRD70_10870 PF00391 PEP-utilising enzyme, mobile domain HRD70_10870 PF05524 PEP-utilising enzyme, N-terminal HRD70_10875 PF00381 PTS HPr component phosphorylation site HRD70_10880 PF00291 Pyridoxal-phosphate dependent enzyme HRD70_10890 PF04354 ZipA, C-terminal FtsZ-binding domain HRD70_10895 PF00533 BRCA1 C Terminus (BRCT) domain HRD70_10895 PF12826 Helix-hairpin-helix motif HRD70_10895 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HRD70_10895 PF03120 NAD-dependent DNA ligase OB-fold domain HRD70_10895 PF01653 NAD-dependent DNA ligase adenylation domain HRD70_10900 PF12843 Putative quorum-sensing-regulated virulence factor HRD70_10925 PF00749 tRNA synthetases class I (E and Q), catalytic domain HRD70_10970 PF07662 Na+ dependent nucleoside transporter C-terminus HRD70_10970 PF01773 Na+ dependent nucleoside transporter N-terminus HRD70_10970 PF07670 Nucleoside recognition HRD70_10975 PF01566 Natural resistance-associated macrophage protein HRD70_10985 PF00248 Aldo/keto reductase family HRD70_10990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRD70_10990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRD70_10990 PF00205 Thiamine pyrophosphate enzyme, central domain HRD70_10995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_10995 PF03466 LysR substrate binding domain HRD70_11005 PF02685 Glucokinase HRD70_11010 PF07690 Major Facilitator Superfamily HRD70_11015 PF00072 Response regulator receiver domain HRD70_11015 PF04397 LytTr DNA-binding domain HRD70_11020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_11020 PF07694 5TMR of 5TMR-LYT HRD70_11020 PF06580 Histidine kinase HRD70_11025 PF07350 Protein of unknown function (DUF1479) HRD70_11035 PF00155 Aminotransferase class I and II HRD70_11040 PF01292 Prokaryotic cytochrome b561 HRD70_11055 PF08241 Methyltransferase domain HRD70_11065 PF00501 AMP-binding enzyme HRD70_11065 PF13193 AMP-binding enzyme C-terminal domain HRD70_11065 PF00668 Condensation domain HRD70_11065 PF00550 Phosphopantetheine attachment site HRD70_11085 PF04976 DMSO reductase anchor subunit (DmsC) HRD70_11090 PF12800 4Fe-4S binding domain HRD70_11090 PF13247 4Fe-4S dicluster domain HRD70_11095 PF01568 Molydopterin dinucleotide binding domain HRD70_11095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRD70_11095 PF00384 Molybdopterin oxidoreductase HRD70_11105 PF01810 LysE type translocator HRD70_11110 PF00005 ABC transporter HRD70_11115 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_11125 PF13406 Transglycosylase SLT domain HRD70_11130 PF00324 Amino acid permease HRD70_11135 PF07969 Amidohydrolase family HRD70_11145 PF07690 Major Facilitator Superfamily HRD70_11150 PF02405 Permease MlaE HRD70_11155 PF00005 ABC transporter HRD70_11170 PF01292 Prokaryotic cytochrome b561 HRD70_11175 PF04264 YceI-like domain HRD70_11180 PF00356 Bacterial regulatory proteins, lacI family HRD70_11185 PF02378 Phosphotransferase system, EIIC HRD70_11185 PF00367 phosphotransferase system, EIIB HRD70_11190 PF00232 Glycosyl hydrolase family 1 HRD70_11200 PF03551 Transcriptional regulator PadR-like family HRD70_11215 PF08274 PhnA Zinc-Ribbon HRD70_11215 PF03831 PhnA domain HRD70_11220 PF03180 NLPA lipoprotein HRD70_11225 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_11230 PF09383 NIL domain HRD70_11230 PF00005 ABC transporter HRD70_11240 PF01226 Formate/nitrite transporter HRD70_11245 PF00005 ABC transporter HRD70_11250 PF03379 CcmB protein HRD70_11255 PF01578 Cytochrome C assembly protein HRD70_11260 PF04995 Heme exporter protein D (CcmD) HRD70_11265 PF03100 CcmE HRD70_11270 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HRD70_11270 PF01578 Cytochrome C assembly protein HRD70_11275 PF08534 Redoxin HRD70_11280 PF03918 Cytochrome C biogenesis protein HRD70_11285 PF03918 Cytochrome C biogenesis protein HRD70_11290 PF04333 MlaA lipoprotein HRD70_11300 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HRD70_11305 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HRD70_11310 PF04175 Protein of unknown function (DUF406) HRD70_11315 PF02803 Thiolase, C-terminal domain HRD70_11315 PF00108 Thiolase, N-terminal domain HRD70_11320 PF00378 Enoyl-CoA hydratase/isomerase HRD70_11320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HRD70_11320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HRD70_11325 PF00300 Histidine phosphatase superfamily (branch 1) HRD70_11330 PF01713 Smr domain HRD70_11335 PF05175 Methyltransferase small domain HRD70_11340 PF01264 Chorismate synthase HRD70_11345 PF03411 Penicillin-insensitive murein endopeptidase HRD70_11350 PF01925 Sulfite exporter TauE/SafE HRD70_11355 PF04315 Elongation factor P hydroxylase HRD70_11360 PF08891 YfcL protein HRD70_11365 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HRD70_11365 PF01266 FAD dependent oxidoreductase HRD70_11370 PF02801 Beta-ketoacyl synthase, C-terminal domain HRD70_11370 PF00109 Beta-ketoacyl synthase, N-terminal domain HRD70_11375 PF00990 Diguanylate cyclase, GGDEF domain HRD70_11375 PF17151 Periplasmic sensor domain HRD70_11380 PF01177 Asp/Glu/Hydantoin racemase HRD70_11390 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HRD70_11395 PF00232 Glycosyl hydrolase family 1 HRD70_11400 PF02378 Phosphotransferase system, EIIC HRD70_11405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HRD70_11410 PF00356 Bacterial regulatory proteins, lacI family HRD70_11415 PF00328 Histidine phosphatase superfamily (branch 2) HRD70_11420 PF03600 Citrate transporter HRD70_11430 PF11412 Disulphide bond corrector protein DsbC HRD70_11430 PF02683 Cytochrome C biogenesis protein transmembrane region HRD70_11440 PF00578 AhpC/TSA family HRD70_11445 PF00155 Aminotransferase class I and II HRD70_11455 PF00892 EamA-like transporter family HRD70_11465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRD70_11465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRD70_11465 PF11890 Domain of unknown function (DUF3410) HRD70_11470 PF01118 Semialdehyde dehydrogenase, NAD binding domain HRD70_11470 PF02774 Semialdehyde dehydrogenase, dimerisation domain HRD70_11475 PF01416 tRNA pseudouridine synthase HRD70_11480 PF09335 SNARE associated Golgi protein HRD70_11485 PF01039 Carboxyl transferase domain HRD70_11485 PF17848 Acetyl-coA carboxylase zinc finger domain HRD70_11490 PF02875 Mur ligase family, glutamate ligase domain HRD70_11490 PF08245 Mur ligase middle domain HRD70_11495 PF05036 Sporulation related domain HRD70_11500 PF02674 Colicin V production protein HRD70_11505 PF00156 Phosphoribosyl transferase domain HRD70_11510 PF02441 Flavoprotein HRD70_11515 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRD70_11520 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_11525 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_11530 PF00005 ABC transporter HRD70_11535 PF01370 NAD dependent epimerase/dehydratase family HRD70_11535 PF08338 Domain of unknown function (DUF1731) HRD70_11545 PF12850 Calcineurin-like phosphoesterase superfamily domain HRD70_11550 PF00293 NUDIX domain HRD70_11555 PF03611 PTS system sugar-specific permease component HRD70_11565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HRD70_11570 PF00356 Bacterial regulatory proteins, lacI family HRD70_11570 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HRD70_11575 PF01515 Phosphate acetyl/butaryl transferase HRD70_11575 PF07085 DRTGG domain HRD70_11580 PF00871 Acetokinase family HRD70_11585 PF04217 Protein of unknown function, DUF412 HRD70_11590 PF03887 YfbU domain HRD70_11595 PF13419 Haloacid dehalogenase-like hydrolase HRD70_11600 PF02080 TrkA-C domain HRD70_11600 PF03600 Citrate transporter HRD70_11615 PF00155 Aminotransferase class I and II HRD70_11625 PF03466 LysR substrate binding domain HRD70_11625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_11630 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HRD70_11635 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HRD70_11640 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HRD70_11640 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HRD70_11650 PF10531 SLBB domain HRD70_11650 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HRD70_11650 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HRD70_11655 PF01568 Molydopterin dinucleotide binding domain HRD70_11655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRD70_11655 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HRD70_11655 PF00384 Molybdopterin oxidoreductase HRD70_11660 PF00146 NADH dehydrogenase HRD70_11665 PF12838 4Fe-4S dicluster domain HRD70_11670 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HRD70_11675 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HRD70_11680 PF00361 Proton-conducting membrane transporter HRD70_11680 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HRD70_11685 PF00361 Proton-conducting membrane transporter HRD70_11690 PF00361 Proton-conducting membrane transporter HRD70_11695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_11695 PF03466 LysR substrate binding domain HRD70_11710 PF06496 Protein of unknown function (DUF1097) HRD70_11720 PF01202 Shikimate kinase HRD70_11725 PF00106 short chain dehydrogenase HRD70_11730 PF00356 Bacterial regulatory proteins, lacI family HRD70_11735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRD70_11735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRD70_11740 PF07690 Major Facilitator Superfamily HRD70_11745 PF03928 Haem-degrading HRD70_11750 PF00920 Dehydratase family HRD70_11755 PF05957 Bacterial protein of unknown function (DUF883) HRD70_11760 PF00425 chorismate binding enzyme HRD70_11765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRD70_11765 PF16582 Middle domain of thiamine pyrophosphate HRD70_11765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRD70_11770 PF12697 Alpha/beta hydrolase family HRD70_11775 PF00378 Enoyl-CoA hydratase/isomerase HRD70_11780 PF13378 Enolase C-terminal domain-like HRD70_11785 PF13193 AMP-binding enzyme C-terminal domain HRD70_11785 PF00501 AMP-binding enzyme HRD70_11790 PF06628 Catalase-related immune-responsive HRD70_11790 PF00199 Catalase HRD70_11795 PF07437 YfaZ precursor HRD70_11800 PF03222 Tryptophan/tyrosine permease family HRD70_11805 PF00994 Probable molybdopterin binding domain HRD70_11810 PF03974 Ecotin HRD70_11815 PF00111 2Fe-2S iron-sulfur cluster binding domain HRD70_11820 PF00268 Ribonucleotide reductase, small chain HRD70_11825 PF02867 Ribonucleotide reductase, barrel domain HRD70_11825 PF03477 ATP cone domain HRD70_11825 PF00317 Ribonucleotide reductase, all-alpha domain HRD70_11835 PF03989 DNA gyrase C-terminal domain, beta-propeller HRD70_11835 PF00521 DNA gyrase/topoisomerase IV, subunit A HRD70_11840 PF00512 His Kinase A (phospho-acceptor) domain HRD70_11840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_11840 PF00072 Response regulator receiver domain HRD70_11840 PF09456 RcsC Alpha-Beta-Loop (ABL) HRD70_11845 PF00196 Bacterial regulatory proteins, luxR family HRD70_11845 PF00072 Response regulator receiver domain HRD70_11850 PF16359 RcsD-ABL domain HRD70_11850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_11850 PF01627 Hpt domain HRD70_11855 PF07690 Major Facilitator Superfamily HRD70_11865 PF08240 Alcohol dehydrogenase GroES-like domain HRD70_11865 PF00107 Zinc-binding dehydrogenase HRD70_11870 PF09278 MerR, DNA binding HRD70_11870 PF00376 MerR family regulatory protein HRD70_11875 PF00267 Gram-negative porin HRD70_11890 PF00144 Beta-lactamase HRD70_11910 PF12706 Beta-lactamase superfamily domain HRD70_11915 PF00672 HAMP domain HRD70_11915 PF02743 Cache domain HRD70_11915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRD70_11920 PF01278 Omptin family HRD70_11925 PF06183 DinI-like family HRD70_11930 PF01381 Helix-turn-helix HRD70_11930 PF00717 Peptidase S24-like HRD70_11935 PF06530 Phage antitermination protein Q HRD70_11945 PF00959 Phage lysozyme HRD70_11970 PF04984 Phage tail sheath protein subtilisin-like domain HRD70_11970 PF17482 Phage tail sheath C-terminal domain HRD70_12010 PF04865 Baseplate J-like protein HRD70_12020 PF07484 Phage Tail Collar Domain HRD70_12025 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HRD70_12030 PF01418 Helix-turn-helix domain, rpiR family HRD70_12030 PF01380 SIS domain HRD70_12035 PF02378 Phosphotransferase system, EIIC HRD70_12035 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HRD70_12035 PF00367 phosphotransferase system, EIIB HRD70_12040 PF00232 Glycosyl hydrolase family 1 HRD70_12055 PF01965 DJ-1/PfpI family HRD70_12070 PF11893 Domain of unknown function (DUF3413) HRD70_12070 PF00884 Sulfatase HRD70_12075 PF07208 Protein of unknown function (DUF1414) HRD70_12080 PF04245 37-kD nucleoid-associated bacterial protein HRD70_12085 PF01386 Ribosomal L25p family HRD70_12090 PF00271 Helicase conserved C-terminal domain HRD70_12090 PF04851 Type III restriction enzyme, res subunit HRD70_12095 PF01479 S4 domain HRD70_12095 PF00849 RNA pseudouridylate synthase HRD70_12100 PF07690 Major Facilitator Superfamily HRD70_12105 PF13989 YejG-like protein HRD70_12110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRD70_12110 PF00005 ABC transporter HRD70_12115 PF12911 N-terminal TM domain of oligopeptide transport permease C HRD70_12115 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_12120 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_12125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRD70_12130 PF00563 EAL domain HRD70_12130 PF12792 CSS motif domain associated with EAL HRD70_12135 PF00877 NlpC/P60 family HRD70_12140 PF01569 PAP2 superfamily HRD70_12145 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRD70_12145 PF07683 Cobalamin synthesis protein cobW C-terminal domain HRD70_12150 PF07729 FCD domain HRD70_12150 PF00392 Bacterial regulatory proteins, gntR family HRD70_12155 PF08125 Mannitol dehydrogenase C-terminal domain HRD70_12155 PF01232 Mannitol dehydrogenase Rossmann domain HRD70_12160 PF03786 D-mannonate dehydratase (UxuA) HRD70_12165 PF08207 Elongation factor P (EF-P) KOW-like domain HRD70_12165 PF01132 Elongation factor P (EF-P) OB domain HRD70_12165 PF09285 Elongation factor P, C-terminal HRD70_12170 PF03222 Tryptophan/tyrosine permease family HRD70_12175 PF03692 Putative zinc- or iron-chelating domain HRD70_12180 PF01568 Molydopterin dinucleotide binding domain HRD70_12180 PF18364 Molybdopterin oxidoreductase N-terminal domain HRD70_12180 PF00384 Molybdopterin oxidoreductase HRD70_12185 PF03264 NapC/NirT cytochrome c family, N-terminal region HRD70_12190 PF00293 NUDIX domain HRD70_12195 PF00381 PTS HPr component phosphorylation site HRD70_12195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HRD70_12200 PF00294 pfkB family carbohydrate kinase HRD70_12205 PF02378 Phosphotransferase system, EIIC HRD70_12205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HRD70_12210 PF01261 Xylose isomerase-like TIM barrel HRD70_12215 PF03601 Conserved hypothetical protein 698 HRD70_12225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_12225 PF03466 LysR substrate binding domain HRD70_12230 PF00324 Amino acid permease HRD70_12235 PF01032 FecCD transport family HRD70_12240 PF00005 ABC transporter HRD70_12245 PF07715 TonB-dependent Receptor Plug Domain HRD70_12245 PF00593 TonB dependent receptor HRD70_12250 PF13417 Glutathione S-transferase, N-terminal domain HRD70_12250 PF00043 Glutathione S-transferase, C-terminal domain HRD70_12265 PF03180 NLPA lipoprotein HRD70_12270 PF00005 ABC transporter HRD70_12270 PF09383 NIL domain HRD70_12275 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_12280 PF01053 Cys/Met metabolism PLP-dependent enzyme HRD70_12285 PF00571 CBS domain HRD70_12285 PF00291 Pyridoxal-phosphate dependent enzyme HRD70_12290 PF00768 D-alanyl-D-alanine carboxypeptidase HRD70_12290 PF07943 Penicillin-binding protein 5, C-terminal domain HRD70_12295 PF03315 Serine dehydratase beta chain HRD70_12295 PF03313 Serine dehydratase alpha chain HRD70_12305 PF08220 DeoR-like helix-turn-helix domain HRD70_12305 PF00455 DeoR C terminal sensor domain HRD70_12310 PF01791 DeoC/LacD family aldolase HRD70_12315 PF01569 PAP2 superfamily HRD70_12325 PF02080 TrkA-C domain HRD70_12325 PF06826 Predicted Permease Membrane Region HRD70_12330 PF00462 Glutaredoxin HRD70_12335 PF07214 Protein of unknown function (DUF1418) HRD70_12340 PF10722 Putative bacterial sensory transduction regulator HRD70_12345 PF13416 Bacterial extracellular solute-binding protein HRD70_12350 PF00005 ABC transporter HRD70_12350 PF08402 TOBE domain HRD70_12355 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_12360 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_12365 PF10767 Protein of unknown function (DUF2593) HRD70_12370 PF05958 tRNA (Uracil-5-)-methyltransferase HRD70_12375 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRD70_12380 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_12385 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_12390 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRD70_12395 PF00005 ABC transporter HRD70_12400 PF12883 Protein of unknown function (DUF3828) HRD70_12410 PF01370 NAD dependent epimerase/dehydratase family HRD70_12415 PF11066 Protein of unknown function (DUF2867) HRD70_12415 PF13460 NAD(P)H-binding HRD70_12420 PF01212 Beta-eliminating lyase HRD70_12430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRD70_12430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRD70_12430 PF00205 Thiamine pyrophosphate enzyme, central domain HRD70_12435 PF00970 Oxidoreductase FAD-binding domain HRD70_12435 PF00175 Oxidoreductase NAD-binding domain HRD70_12435 PF00111 2Fe-2S iron-sulfur cluster binding domain HRD70_12440 PF03063 Prismane/CO dehydrogenase family HRD70_12445 PF03956 Lysine exporter LysO HRD70_12450 PF11398 Protein of unknown function (DUF2813) HRD70_12455 PF04393 Protein of unknown function (DUF535) HRD70_12460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRD70_12465 PF12704 MacB-like periplasmic core domain HRD70_12465 PF00005 ABC transporter HRD70_12465 PF02687 FtsX-like permease family HRD70_12470 PF00313 'Cold-shock' DNA-binding domain HRD70_12475 PF02617 ATP-dependent Clp protease adaptor protein ClpS HRD70_12480 PF02861 Clp amino terminal domain, pathogenicity island component HRD70_12480 PF07724 AAA domain (Cdc48 subfamily) HRD70_12480 PF17871 AAA lid domain HRD70_12480 PF10431 C-terminal, D2-small domain, of ClpB protein HRD70_12480 PF00004 ATPase family associated with various cellular activities (AAA) HRD70_12485 PF01176 Translation initiation factor 1A / IF-1 HRD70_12490 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HRD70_12495 PF00664 ABC transporter transmembrane region HRD70_12495 PF00005 ABC transporter HRD70_12500 PF00005 ABC transporter HRD70_12500 PF00664 ABC transporter transmembrane region HRD70_12505 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRD70_12510 PF01037 Lrp/AsnC ligand binding domain HRD70_12515 PF17854 FtsK alpha domain HRD70_12515 PF01580 FtsK/SpoIIIE family HRD70_12515 PF09397 Ftsk gamma domain HRD70_12515 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HRD70_12520 PF03548 Outer membrane lipoprotein carrier protein LolA HRD70_12525 PF00004 ATPase family associated with various cellular activities (AAA) HRD70_12525 PF16193 AAA C-terminal domain HRD70_12525 PF12002 MgsA AAA+ ATPase C terminal HRD70_12530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRD70_12530 PF02403 Seryl-tRNA synthetase N-terminal domain HRD70_12535 PF07690 Major Facilitator Superfamily HRD70_12540 PF04055 Radical SAM superfamily HRD70_12545 PF02901 Pyruvate formate lyase-like HRD70_12545 PF01228 Glycine radical HRD70_12550 PF01226 Formate/nitrite transporter HRD70_12555 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding HRD70_12555 PF18381 YcaO cyclodehydratase C-terminal domain HRD70_12560 PF17763 Glutaminase/Asparaginase C-terminal domain HRD70_12560 PF00710 Asparaginase, N-terminal HRD70_12565 PF04239 Protein of unknown function (DUF421) HRD70_12570 PF00266 Aminotransferase class-V HRD70_12575 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HRD70_12580 PF02224 Cytidylate kinase HRD70_12585 PF00575 S1 RNA binding domain HRD70_12590 PF00216 Bacterial DNA-binding protein HRD70_12595 PF03772 Competence protein HRD70_12595 PF00753 Metallo-beta-lactamase superfamily HRD70_12600 PF00005 ABC transporter HRD70_12600 PF00664 ABC transporter transmembrane region HRD70_12605 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HRD70_12610 PF07063 Domain of unknown function (DUF1338) HRD70_12615 PF00313 'Cold-shock' DNA-binding domain HRD70_12620 PF03966 Trm112p-like protein HRD70_12625 PF02348 Cytidylyltransferase HRD70_12630 PF01636 Phosphotransferase enzyme family HRD70_12635 PF02698 DUF218 domain HRD70_12640 PF13847 Methyltransferase domain HRD70_12645 PF17193 MukF C-terminal domain HRD70_12645 PF03882 MukF winged-helix domain HRD70_12645 PF17192 MukF middle domain HRD70_12650 PF04288 MukE-like family HRD70_12655 PF04310 MukB N-terminal HRD70_12655 PF16330 MukB hinge domain HRD70_12660 PF03734 L,D-transpeptidase catalytic domain HRD70_12660 PF01471 Putative peptidoglycan binding domain HRD70_12665 PF05951 Bacterial protein of unknown function (DUF882) HRD70_12670 PF00753 Metallo-beta-lactamase superfamily HRD70_12675 PF12792 CSS motif domain associated with EAL HRD70_12675 PF00563 EAL domain HRD70_12680 PF00155 Aminotransferase class I and II HRD70_12685 PF00267 Gram-negative porin HRD70_12690 PF01336 OB-fold nucleic acid binding domain HRD70_12690 PF00152 tRNA synthetases class II (D, K and N) HRD70_12695 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HRD70_12695 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HRD70_12700 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HRD70_12700 PF01433 Peptidase family M1 domain HRD70_12700 PF11940 Domain of unknown function (DUF3458) Ig-like fold HRD70_12705 PF01180 Dihydroorotate dehydrogenase HRD70_12710 PF07126 Cell-division protein ZapC HRD70_12715 PF03473 MOSC domain HRD70_12715 PF00111 2Fe-2S iron-sulfur cluster binding domain HRD70_12715 PF03476 MOSC N-terminal beta barrel domain HRD70_12720 PF10672 S-adenosylmethionine-dependent methyltransferase HRD70_12720 PF02926 THUMP domain HRD70_12720 PF01170 Putative RNA methylase family UPF0020 HRD70_12725 PF00005 ABC transporter HRD70_12725 PF16326 ABC transporter C-terminal domain HRD70_12725 PF12848 ABC transporter HRD70_12730 PF04403 Paraquat-inducible protein A HRD70_12735 PF02470 MlaD protein HRD70_12740 PF03886 ABC-type transport auxiliary lipoprotein component HRD70_12745 PF04957 Ribosome modulation factor HRD70_12750 PF00109 Beta-ketoacyl synthase, N-terminal domain HRD70_12750 PF02801 Beta-ketoacyl synthase, C-terminal domain HRD70_12760 PF07977 FabA-like domain HRD70_12765 PF05362 Lon protease (S16) C-terminal proteolytic domain HRD70_12765 PF13654 AAA domain HRD70_12770 PF06303 MatP N-terminal domain HRD70_12770 PF17414 MatP C-terminal ribbon-helix-helix domain HRD70_12775 PF01389 OmpA-like transmembrane domain HRD70_12775 PF00691 OmpA family HRD70_12780 PF03846 Cell division inhibitor SulA HRD70_12785 PF04993 TfoX N-terminal domain HRD70_12785 PF04994 TfoX C-terminal domain HRD70_12790 PF12805 FUSC-like inner membrane protein yccS HRD70_12795 PF03733 Inner membrane component domain HRD70_12800 PF12462 DNA helicase IV / RNA helicase N terminal HRD70_12800 PF00580 UvrD/REP helicase N-terminal domain HRD70_12800 PF13361 UvrD-like helicase C-terminal domain HRD70_12805 PF02142 MGS-like domain HRD70_12810 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HRD70_12815 PF13380 CoA binding domain HRD70_12820 PF08755 Hemimethylated DNA-binding protein YccV like HRD70_12825 PF17785 PUA-like domain HRD70_12825 PF10672 S-adenosylmethionine-dependent methyltransferase HRD70_12835 PF00708 Acylphosphatase HRD70_12840 PF04358 DsrC like protein HRD70_12855 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HRD70_12860 PF06755 CbtA_toxin of type IV toxin-antitoxin system HRD70_12870 PF04002 RadC-like JAB domain HRD70_12875 PF03230 Antirestriction protein HRD70_12880 PF06067 Domain of unknown function (DUF932) HRD70_12930 PF01548 Transposase HRD70_12930 PF02371 Transposase IS116/IS110/IS902 family HRD70_12945 PF14282 FlxA-like protein HRD70_12995 PF01548 Transposase HRD70_12995 PF02371 Transposase IS116/IS110/IS902 family HRD70_13000 PF00005 ABC transporter HRD70_13000 PF00664 ABC transporter transmembrane region HRD70_13000 PF03412 Peptidase C39 family HRD70_13005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRD70_13005 PF00529 HlyD membrane-fusion protein of T1SS HRD70_13015 PF01527 Transposase HRD70_13025 PF13148 Protein of unknown function (DUF3987) HRD70_13030 PF05930 Prophage CP4-57 regulatory protein (AlpA) HRD70_13040 PF01527 Transposase HRD70_13040 PF13276 HTH-like domain HRD70_13040 PF13333 Integrase core domain HRD70_13040 PF00665 Integrase core domain HRD70_13050 PF04851 Type III restriction enzyme, res subunit HRD70_13050 PF00271 Helicase conserved C-terminal domain HRD70_13050 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) HRD70_13050 PF08463 EcoEI R protein C-terminal HRD70_13055 PF12161 HsdM N-terminal domain HRD70_13055 PF02384 N-6 DNA Methylase HRD70_13060 PF01420 Type I restriction modification DNA specificity domain HRD70_13075 PF00589 Phage integrase family HRD70_13075 PF13356 Arm DNA-binding domain HRD70_13080 PF01867 CRISPR associated protein Cas1 HRD70_13090 PF09611 CRISPR-associated protein (Cas_Csy1) HRD70_13095 PF09614 CRISPR-associated protein (Cas_Csy2) HRD70_13100 PF09615 CRISPR-associated protein (Cas_Csy3) HRD70_13105 PF09618 CRISPR-associated protein (Cas_Csy4) HRD70_13110 PF02335 Cytochrome c552 HRD70_13115 PF13435 Cytochrome c554 and c-prime HRD70_13115 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) HRD70_13120 PF00037 4Fe-4S binding domain HRD70_13120 PF13247 4Fe-4S dicluster domain HRD70_13125 PF03916 Polysulphide reductase, NrfD HRD70_13130 PF01578 Cytochrome C assembly protein HRD70_13130 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HRD70_13135 PF08534 Redoxin HRD70_13140 PF03918 Cytochrome C biogenesis protein HRD70_13155 PF02080 TrkA-C domain HRD70_13155 PF00999 Sodium/hydrogen exchanger family HRD70_13155 PF03471 Transporter associated domain HRD70_13165 PF01757 Acyltransferase family HRD70_13170 PF04349 Periplasmic glucan biosynthesis protein, MdoG HRD70_13175 PF00535 Glycosyl transferase family 2 HRD70_13180 PF07119 Protein of unknown function (DUF1375) HRD70_13195 PF00171 Aldehyde dehydrogenase family HRD70_13200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_13200 PF03466 LysR substrate binding domain HRD70_13205 PF00854 POT family HRD70_13210 PF07690 Major Facilitator Superfamily HRD70_13215 PF07681 DoxX HRD70_13220 PF03279 Bacterial lipid A biosynthesis acyltransferase HRD70_13225 PF00072 Response regulator receiver domain HRD70_13225 PF00196 Bacterial regulatory proteins, luxR family HRD70_13230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_13230 PF00512 His Kinase A (phospho-acceptor) domain HRD70_13235 PF13247 4Fe-4S dicluster domain HRD70_13240 PF03916 Polysulphide reductase, NrfD HRD70_13245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRD70_13245 PF00384 Molybdopterin oxidoreductase HRD70_13245 PF01568 Molydopterin dinucleotide binding domain HRD70_13260 PF01594 AI-2E family transporter HRD70_13270 PF00196 Bacterial regulatory proteins, luxR family HRD70_13275 PF01266 FAD dependent oxidoreductase HRD70_13280 PF13991 BssS protein family HRD70_13285 PF06183 DinI-like family HRD70_13290 PF01979 Amidohydrolase family HRD70_13295 PF03992 Antibiotic biosynthesis monooxygenase HRD70_13300 PF10150 Ribonuclease E/G family HRD70_13300 PF00575 S1 RNA binding domain HRD70_13300 PF10150 Ribonuclease E/G family HRD70_13300 PF00575 S1 RNA binding domain HRD70_13300 PF12111 Polyribonucleotide phosphorylase C terminal HRD70_13300 PF12111 Polyribonucleotide phosphorylase C terminal HRD70_13305 PF01479 S4 domain HRD70_13305 PF00849 RNA pseudouridylate synthase HRD70_13310 PF02545 Maf-like protein HRD70_13315 PF02620 Large ribosomal RNA subunit accumulation protein YceD HRD70_13320 PF01783 Ribosomal L32p protein family HRD70_13325 PF02504 Fatty acid synthesis protein HRD70_13330 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HRD70_13330 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HRD70_13335 PF00698 Acyl transferase domain HRD70_13345 PF00550 Phosphopantetheine attachment site HRD70_13350 PF00109 Beta-ketoacyl synthase, N-terminal domain HRD70_13350 PF02801 Beta-ketoacyl synthase, C-terminal domain HRD70_13355 PF01063 Amino-transferase class IV HRD70_13360 PF02618 YceG-like family HRD70_13365 PF02223 Thymidylate kinase HRD70_13370 PF09115 DNA polymerase III, delta subunit, C terminal HRD70_13375 PF01026 TatD related DNase HRD70_13380 PF00367 phosphotransferase system, EIIB HRD70_13380 PF02378 Phosphotransferase system, EIIC HRD70_13410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRD70_13410 PF12793 Sugar transport-related sRNA regulator N-term HRD70_13415 PF08501 Shikimate dehydrogenase substrate binding domain HRD70_13420 PF01230 HIT domain HRD70_13425 PF07233 Protein of unknown function (DUF1425) HRD70_13430 PF13036 Peptidoglycan-synthase activator LpoB HRD70_13430 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HRD70_13435 PF01636 Phosphotransferase enzyme family HRD70_13440 PF00933 Glycosyl hydrolase family 3 N terminal domain HRD70_13445 PF05728 Uncharacterised protein family (UPF0227) HRD70_13450 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRD70_13465 PF05433 Glycine zipper 2TM domain HRD70_13470 PF17757 UvrB interaction domain HRD70_13470 PF03461 TRCF domain HRD70_13470 PF00271 Helicase conserved C-terminal domain HRD70_13470 PF00270 DEAD/DEAH box helicase HRD70_13470 PF02559 CarD-like/TRCF domain HRD70_13475 PF02687 FtsX-like permease family HRD70_13475 PF12704 MacB-like periplasmic core domain HRD70_13480 PF00005 ABC transporter HRD70_13485 PF02687 FtsX-like permease family HRD70_13485 PF12704 MacB-like periplasmic core domain HRD70_13490 PF00480 ROK family HRD70_13495 PF02146 Sir2 family HRD70_13500 PF01546 Peptidase family M20/M25/M40 HRD70_13500 PF07687 Peptidase dimerisation domain HRD70_13505 PF08007 Cupin superfamily protein HRD70_13510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_13510 PF08918 PhoQ Sensor HRD70_13515 PF00486 Transcriptional regulatory protein, C terminal HRD70_13515 PF00072 Response regulator receiver domain HRD70_13525 PF08328 Adenylosuccinate lyase C-terminal HRD70_13525 PF00206 Lyase HRD70_13530 PF04356 Protein of unknown function (DUF489) HRD70_13540 PF00293 NUDIX domain HRD70_13545 PF00849 RNA pseudouridylate synthase HRD70_13550 PF00180 Isocitrate/isopropylmalate dehydrogenase HRD70_13555 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain HRD70_13555 PF00589 Phage integrase family HRD70_13580 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HRD70_13580 PF00356 Bacterial regulatory proteins, lacI family HRD70_13590 PF08447 PAS fold HRD70_13590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRD70_13595 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HRD70_13595 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HRD70_13600 PF01965 DJ-1/PfpI family HRD70_13600 PF12833 Helix-turn-helix domain HRD70_13605 PF01053 Cys/Met metabolism PLP-dependent enzyme HRD70_13610 PF05368 NmrA-like family HRD70_13615 PF01638 HxlR-like helix-turn-helix HRD70_13640 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_13645 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_13650 PF00005 ABC transporter HRD70_13670 PF06411 HdeA/HdeB family HRD70_13675 PF01590 GAF domain HRD70_13675 PF00563 EAL domain HRD70_13675 PF00990 Diguanylate cyclase, GGDEF domain HRD70_13675 PF00360 Phytochrome region HRD70_13685 PF00005 ABC transporter HRD70_13685 PF00664 ABC transporter transmembrane region HRD70_13695 PF13520 Amino acid permease HRD70_13705 PF12833 Helix-turn-helix domain HRD70_13710 PF10964 Protein of unknown function (DUF2766) HRD70_13715 PF13996 YobH-like protein HRD70_13720 PF13998 MgrB protein HRD70_13725 PF13974 YebO-like protein HRD70_13740 PF00324 Amino acid permease HRD70_13745 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP HRD70_13750 PF10736 Protein of unknown function (DUF2627) HRD70_13755 PF00313 'Cold-shock' DNA-binding domain HRD70_13765 PF00905 Penicillin binding protein transpeptidase domain HRD70_13765 PF03717 Penicillin-binding Protein dimerisation domain HRD70_13770 PF13847 Methyltransferase domain HRD70_13780 PF00990 Diguanylate cyclase, GGDEF domain HRD70_13780 PF05231 MASE1 HRD70_13780 PF08447 PAS fold HRD70_13780 PF08448 PAS fold HRD70_13780 PF13426 PAS domain HRD70_13780 PF00563 EAL domain HRD70_13785 PF00593 TonB dependent receptor HRD70_13785 PF07715 TonB-dependent Receptor Plug Domain HRD70_13790 PF02659 Putative manganese efflux pump HRD70_13795 PF06173 Protein of unknown function (DUF986) HRD70_13800 PF03613 PTS system mannose/fructose/sorbose family IID component HRD70_13805 PF03609 PTS system sorbose-specific iic component HRD70_13810 PF03610 PTS system fructose IIA component HRD70_13810 PF03830 PTS system sorbose subfamily IIB component HRD70_13815 PF03741 Integral membrane protein TerC family HRD70_13815 PF03471 Transporter associated domain HRD70_13820 PF02048 Heat-stable enterotoxin ST HRD70_13825 PF03313 Serine dehydratase alpha chain HRD70_13825 PF03315 Serine dehydratase beta chain HRD70_13830 PF00293 NUDIX domain HRD70_13835 PF00425 chorismate binding enzyme HRD70_13835 PF04715 Anthranilate synthase component I, N terminal region HRD70_13840 PF03701 Uncharacterised protein family (UPF0181) HRD70_13845 PF02222 ATP-grasp domain HRD70_13850 PF00270 DEAD/DEAH box helicase HRD70_13850 PF03880 DbpA RNA binding domain HRD70_13850 PF00271 Helicase conserved C-terminal domain HRD70_13855 PF07130 YebG protein HRD70_13865 PF13995 YebF-like protein HRD70_13870 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HRD70_13870 PF00326 Prolyl oligopeptidase family HRD70_13875 PF00929 Exonuclease HRD70_13880 PF00561 alpha/beta hydrolase fold HRD70_13885 PF06440 DNA polymerase III, theta subunit HRD70_13890 PF00210 Ferritin-like domain HRD70_13895 PF04234 CopC domain HRD70_13900 PF05425 Copper resistance protein D HRD70_13905 PF10709 Protein of unknown function (DUF2511) HRD70_14010 PF00717 Peptidase S24-like HRD70_14010 PF01381 Helix-turn-helix HRD70_14045 PF04381 Putative exonuclease, RdgC HRD70_14055 PF01555 DNA methylase HRD70_14060 PF05869 DNA N-6-adenine-methyltransferase (Dam) HRD70_14075 PF07102 Protein of unknown function (DUF1364) HRD70_14105 PF00959 Phage lysozyme HRD70_14260 PF00144 Beta-lactamase HRD70_14270 PF01479 S4 domain HRD70_14270 PF00849 RNA pseudouridylate synthase HRD70_14275 PF03616 Sodium/glutamate symporter HRD70_14295 PF00924 Mechanosensitive ion channel HRD70_14300 PF02798 Glutathione S-transferase, N-terminal domain HRD70_14300 PF14834 Glutathione S-transferase, C-terminal domain HRD70_14320 PF07351 Protein of unknown function (DUF1480) HRD70_14325 PF00990 Diguanylate cyclase, GGDEF domain HRD70_14325 PF00360 Phytochrome region HRD70_14325 PF01590 GAF domain HRD70_14325 PF00563 EAL domain HRD70_14360 PF07690 Major Facilitator Superfamily HRD70_14365 PF03466 LysR substrate binding domain HRD70_14365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_14370 PF02470 MlaD protein HRD70_14375 PF04403 Paraquat-inducible protein A HRD70_14380 PF13185 GAF domain HRD70_14385 PF04352 ProQ/FINO family HRD70_14385 PF17516 ProQ C-terminal domain HRD70_14390 PF17804 Tail specific protease N-terminal domain HRD70_14390 PF03572 Peptidase family S41 HRD70_14390 PF00595 PDZ domain HRD70_14390 PF11818 C-terminal domain of tail specific protease (DUF3340) HRD70_14395 PF01435 Peptidase family M48 HRD70_14405 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HRD70_14405 PF02753 Pili assembly chaperone PapD, C-terminal domain HRD70_14415 PF02753 Pili assembly chaperone PapD, C-terminal domain HRD70_14415 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HRD70_14420 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HRD70_14420 PF02753 Pili assembly chaperone PapD, C-terminal domain HRD70_14425 PF00577 Outer membrane usher protein HRD70_14425 PF13953 PapC C-terminal domain HRD70_14425 PF13954 PapC N-terminal domain HRD70_14435 PF00196 Bacterial regulatory proteins, luxR family HRD70_14435 PF00072 Response regulator receiver domain HRD70_14440 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRD70_14440 PF00072 Response regulator receiver domain HRD70_14440 PF01627 Hpt domain HRD70_14440 PF00512 His Kinase A (phospho-acceptor) domain HRD70_14440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_14445 PF07690 Major Facilitator Superfamily HRD70_14450 PF14583 Oligogalacturonate lyase HRD70_14455 PF01614 Bacterial transcriptional regulator HRD70_14455 PF09339 IclR helix-turn-helix domain HRD70_14460 PF01510 N-acetylmuramoyl-L-alanine amidase HRD70_14470 PF04307 LexA-binding, inner membrane-associated putative hydrolase HRD70_14475 PF06178 Oligogalacturonate-specific porin protein (KdgM) HRD70_14480 PF01547 Bacterial extracellular solute-binding protein HRD70_14485 PF00005 ABC transporter HRD70_14485 PF17912 MalK OB fold domain HRD70_14485 PF03459 TOBE domain HRD70_14490 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_14495 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_14500 PF06917 Periplasmic pectate lyase HRD70_14510 PF04962 KduI/IolB family HRD70_14515 PF07883 Cupin domain HRD70_14520 PF13419 Haloacid dehalogenase-like hydrolase HRD70_14525 PF14002 YniB-like protein HRD70_14530 PF03881 Fructosamine kinase HRD70_14535 PF00950 ABC 3 transport family HRD70_14540 PF00950 ABC 3 transport family HRD70_14545 PF00005 ABC transporter HRD70_14550 PF01297 Zinc-uptake complex component A periplasmic HRD70_14555 PF01464 Transglycosylase SLT domain HRD70_14560 PF01914 MarC family integral membrane protein HRD70_14585 PF13619 KTSC domain HRD70_14605 PF03129 Anticodon binding domain HRD70_14605 PF02824 TGS domain HRD70_14605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRD70_14605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HRD70_14610 PF05198 Translation initiation factor IF-3, N-terminal domain HRD70_14610 PF00707 Translation initiation factor IF-3, C-terminal domain HRD70_14620 PF00453 Ribosomal protein L20 HRD70_14630 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HRD70_14630 PF01409 tRNA synthetases class II core domain (F) HRD70_14635 PF01588 Putative tRNA binding domain HRD70_14635 PF03483 B3/4 domain HRD70_14635 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HRD70_14635 PF03484 tRNA synthetase B5 domain HRD70_14635 PF03147 Ferredoxin-fold anticodon binding domain HRD70_14640 PF00216 Bacterial DNA-binding protein HRD70_14645 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HRD70_14655 PF01032 FecCD transport family HRD70_14660 PF00255 Glutathione peroxidase HRD70_14665 PF00005 ABC transporter HRD70_14670 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HRD70_14675 PF00535 Glycosyl transferase family 2 HRD70_14680 PF01370 NAD dependent epimerase/dehydratase family HRD70_14680 PF02911 Formyl transferase, C-terminal domain HRD70_14680 PF00551 Formyl transferase HRD70_14685 PF01522 Polysaccharide deacetylase HRD70_14690 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HRD70_14695 PF00892 EamA-like transporter family HRD70_14705 PF00877 NlpC/P60 family HRD70_14710 PF10437 Bacterial lipoate protein ligase C-terminus HRD70_14710 PF03099 Biotin/lipoate A/B protein ligase family HRD70_14715 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HRD70_14720 PF01497 Periplasmic binding protein HRD70_14725 PF05171 Haemin-degrading HemS.ChuX domain HRD70_14730 PF07715 TonB-dependent Receptor Plug Domain HRD70_14730 PF00593 TonB dependent receptor HRD70_14735 PF10636 Hemin uptake protein hemP HRD70_14740 PF00793 DAHP synthetase I family HRD70_14745 PF03618 Kinase/pyrophosphorylase HRD70_14750 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HRD70_14750 PF02896 PEP-utilising enzyme, TIM barrel domain HRD70_14750 PF00391 PEP-utilising enzyme, mobile domain HRD70_14760 PF01594 AI-2E family transporter HRD70_14770 PF02913 FAD linked oxidases, C-terminal domain HRD70_14770 PF13183 4Fe-4S dicluster domain HRD70_14770 PF01565 FAD binding domain HRD70_14775 PF03061 Thioesterase superfamily HRD70_14780 PF01521 Iron-sulphur cluster biosynthesis HRD70_14785 PF01458 Uncharacterized protein family (UPF0051) HRD70_14790 PF00005 ABC transporter HRD70_14795 PF01458 Uncharacterized protein family (UPF0051) HRD70_14800 PF00266 Aminotransferase class-V HRD70_14805 PF02657 Fe-S metabolism associated domain HRD70_14810 PF17969 L,D-transpeptidase C-terminal domain HRD70_14810 PF01476 LysM domain HRD70_14810 PF03734 L,D-transpeptidase catalytic domain HRD70_14815 PF04728 Lipoprotein leucine-zipper HRD70_14820 PF00224 Pyruvate kinase, barrel domain HRD70_14820 PF02887 Pyruvate kinase, alpha/beta domain HRD70_14840 PF01554 MatE HRD70_14845 PF00677 Lumazine binding domain HRD70_14855 PF07690 Major Facilitator Superfamily HRD70_14860 PF03466 LysR substrate binding domain HRD70_14860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_14865 PF00356 Bacterial regulatory proteins, lacI family HRD70_14875 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HRD70_14875 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HRD70_14880 PF00877 NlpC/P60 family HRD70_14885 PF00462 Glutaredoxin HRD70_14890 PF00929 Exonuclease HRD70_14895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRD70_14905 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HRD70_14910 PF00440 Bacterial regulatory proteins, tetR family HRD70_14910 PF16925 Tetracyclin repressor-like, C-terminal domain HRD70_14915 PF08019 Phosphoethanolamine transferase EptA/EptB HRD70_14915 PF00884 Sulfatase HRD70_14920 PF06945 Protein of unknown function (DUF1289) HRD70_14925 PF00248 Aldo/keto reductase family HRD70_14930 PF04632 Fusaric acid resistance protein family HRD70_14935 PF00529 HlyD membrane-fusion protein of T1SS HRD70_14935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRD70_14940 PF07869 Protein of unknown function (DUF1656) HRD70_14945 PF01047 MarR family HRD70_14950 PF05433 Glycine zipper 2TM domain HRD70_14955 PF03702 Anhydro-N-acetylmuramic acid kinase HRD70_14960 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme HRD70_14965 PF01243 Pyridoxamine 5'-phosphate oxidase HRD70_14965 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HRD70_14970 PF00579 tRNA synthetases class I (W and Y) HRD70_14970 PF01479 S4 domain HRD70_14975 PF08543 Phosphomethylpyrimidine kinase HRD70_14980 PF02798 Glutathione S-transferase, N-terminal domain HRD70_14980 PF00043 Glutathione S-transferase, C-terminal domain HRD70_14985 PF11656 YjbD family (DUF3811) HRD70_14990 PF04893 Yip1 domain HRD70_15000 PF00854 POT family HRD70_15005 PF03466 LysR substrate binding domain HRD70_15005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_15015 PF00005 ABC transporter HRD70_15020 PF00005 ABC transporter HRD70_15020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRD70_15025 PF12911 N-terminal TM domain of oligopeptide transport permease C HRD70_15025 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_15030 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_15035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRD70_15040 PF02917 Pertussis toxin, subunit 1 HRD70_15050 PF02954 Bacterial regulatory protein, Fis family HRD70_15050 PF00158 Sigma-54 interaction domain HRD70_15055 PF04012 PspA/IM30 family HRD70_15060 PF06667 Phage shock protein B HRD70_15065 PF04024 PspC domain HRD70_15075 PF04317 YcjX-like family, DUF463 HRD70_15080 PF05128 Domain of unknown function (DUF697) HRD70_15085 PF08808 RES domain HRD70_15090 PF09722 Protein of unknown function (DUF2384) HRD70_15095 PF00158 Sigma-54 interaction domain HRD70_15095 PF18024 Helix-turn-helix domain HRD70_15100 PF08534 Redoxin HRD70_15105 PF13378 Enolase C-terminal domain-like HRD70_15105 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HRD70_15110 PF00246 Zinc carboxypeptidase HRD70_15115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRD70_15125 PF01544 CorA-like Mg2+ transporter protein HRD70_15130 PF01171 PP-loop family HRD70_15135 PF00388 Phosphatidylinositol-specific phospholipase C, X domain HRD70_15140 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HRD70_15140 PF10371 Domain of unknown function HRD70_15140 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HRD70_15140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRD70_15140 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HRD70_15145 PF00893 Small Multidrug Resistance protein HRD70_15150 PF02308 MgtC family HRD70_15155 PF03891 Domain of unknown function (DUF333) HRD70_15160 PF03724 META domain HRD70_15165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRD70_15165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRD70_15170 PF11739 Dicarboxylate transport HRD70_15175 PF13617 YnbE-like lipoprotein HRD70_15180 PF07027 Protein of unknown function (DUF1318) HRD70_15185 PF07690 Major Facilitator Superfamily HRD70_15190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRD70_15190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRD70_15195 PF01232 Mannitol dehydrogenase Rossmann domain HRD70_15195 PF08125 Mannitol dehydrogenase C-terminal domain HRD70_15200 PF04198 Putative sugar-binding domain HRD70_15205 PF02525 Flavodoxin-like fold HRD70_15210 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HRD70_15210 PF11898 Domain of unknown function (DUF3418) HRD70_15210 PF04408 Helicase associated domain (HA2) HRD70_15210 PF00271 Helicase conserved C-terminal domain HRD70_15210 PF00270 DEAD/DEAH box helicase HRD70_15225 PF00089 Trypsin HRD70_15235 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HRD70_15240 PF00512 His Kinase A (phospho-acceptor) domain HRD70_15240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_15240 PF00672 HAMP domain HRD70_15245 PF00486 Transcriptional regulatory protein, C terminal HRD70_15245 PF00072 Response regulator receiver domain HRD70_15255 PF13520 Amino acid permease HRD70_15260 PF07338 Protein of unknown function (DUF1471) HRD70_15265 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HRD70_15265 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HRD70_15265 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HRD70_15270 PF02233 NAD(P) transhydrogenase beta subunit HRD70_15275 PF00582 Universal stress protein family HRD70_15280 PF13545 Crp-like helix-turn-helix domain HRD70_15280 PF00027 Cyclic nucleotide-binding domain HRD70_15285 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HRD70_15285 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HRD70_15300 PF06445 GyrI-like small molecule binding domain HRD70_15305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_15305 PF03466 LysR substrate binding domain HRD70_15315 PF00245 Alkaline phosphatase HRD70_15330 PF13419 Haloacid dehalogenase-like hydrolase HRD70_15340 PF01842 ACT domain HRD70_15345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRD70_15345 PF00205 Thiamine pyrophosphate enzyme, central domain HRD70_15345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRD70_15360 PF01510 N-acetylmuramoyl-L-alanine amidase HRD70_15385 PF03466 LysR substrate binding domain HRD70_15385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_15390 PF01048 Phosphorylase superfamily HRD70_15390 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus HRD70_15395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_15395 PF03466 LysR substrate binding domain HRD70_15410 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRD70_15415 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_15420 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_15425 PF01037 Lrp/AsnC ligand binding domain HRD70_15435 PF02798 Glutathione S-transferase, N-terminal domain HRD70_15475 PF07690 Major Facilitator Superfamily HRD70_15480 PF00106 short chain dehydrogenase HRD70_15485 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HRD70_15490 PF06932 Protein of unknown function (DUF1283) HRD70_15495 PF06649 Protein of unknown function (DUF1161) HRD70_15505 PF00654 Voltage gated chloride channel HRD70_15515 PF00480 ROK family HRD70_15520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_15520 PF03466 LysR substrate binding domain HRD70_15525 PF07690 Major Facilitator Superfamily HRD70_15535 PF05472 DNA replication terminus site-binding protein (Ter protein) HRD70_15540 PF00196 Bacterial regulatory proteins, luxR family HRD70_15545 PF00206 Lyase HRD70_15545 PF10415 Fumarase C C-terminus HRD70_15550 PF01238 Phosphomannose isomerase type I HRD70_15555 PF06097 Bacterial protein of unknown function (DUF945) HRD70_15560 PF00132 Bacterial transferase hexapeptide (six repeats) HRD70_15565 PF00356 Bacterial regulatory proteins, lacI family HRD70_15565 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HRD70_15570 PF00367 phosphotransferase system, EIIB HRD70_15570 PF02378 Phosphotransferase system, EIIC HRD70_15575 PF00155 Aminotransferase class I and II HRD70_15580 PF00962 Adenosine/AMP deaminase HRD70_15585 PF13593 SBF-like CPA transporter family (DUF4137) HRD70_15590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HRD70_15590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HRD70_15595 PF02311 AraC-like ligand binding domain HRD70_15595 PF12833 Helix-turn-helix domain HRD70_15600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRD70_15605 PF02610 L-arabinose isomerase HRD70_15605 PF11762 L-arabinose isomerase C-terminal domain HRD70_15610 PF02463 RecF/RecN/SMC N terminal domain HRD70_15615 PF00005 ABC transporter HRD70_15615 PF03412 Peptidase C39 family HRD70_15615 PF00664 ABC transporter transmembrane region HRD70_15620 PF13533 Biotin-lipoyl like HRD70_15625 PF00005 ABC transporter HRD70_15625 PF03412 Peptidase C39 family HRD70_15625 PF00664 ABC transporter transmembrane region HRD70_15630 PF01268 Formate--tetrahydrofolate ligase HRD70_15635 PF10754 Protein of unknown function (DUF2569) HRD70_15640 PF02508 Rnf-Nqr subunit, membrane protein HRD70_15645 PF04060 Putative Fe-S cluster HRD70_15650 PF13237 4Fe-4S dicluster domain HRD70_15650 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HRD70_15650 PF10531 SLBB domain HRD70_15650 PF13375 RnfC Barrel sandwich hybrid domain HRD70_15655 PF06445 GyrI-like small molecule binding domain HRD70_15655 PF12833 Helix-turn-helix domain HRD70_15660 PF03116 NQR2, RnfD, RnfE family HRD70_15665 PF04205 FMN-binding domain HRD70_15670 PF02508 Rnf-Nqr subunit, membrane protein HRD70_15675 PF00633 Helix-hairpin-helix motif HRD70_15675 PF00730 HhH-GPD superfamily base excision DNA repair protein HRD70_15675 PF10576 Iron-sulfur binding domain of endonuclease III HRD70_15695 PF00384 Molybdopterin oxidoreductase HRD70_15700 PF08206 Ribonuclease B OB domain HRD70_15700 PF00575 S1 RNA binding domain HRD70_15700 PF00773 RNB domain HRD70_15705 PF02554 Carbon starvation protein CstA HRD70_15705 PF13722 5TM C-terminal transporter carbon starvation CstA HRD70_15710 PF04328 Selenoprotein, putative HRD70_15715 PF00923 Transaldolase/Fructose-6-phosphate aldolase HRD70_15720 PF00455 DeoR C terminal sensor domain HRD70_15720 PF08220 DeoR-like helix-turn-helix domain HRD70_15730 PF00596 Class II Aldolase and Adducin N-terminal domain HRD70_15735 PF05433 Glycine zipper 2TM domain HRD70_15740 PF01253 Translation initiation factor SUI1 HRD70_15745 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HRD70_15750 PF07338 Protein of unknown function (DUF1471) HRD70_15765 PF01638 HxlR-like helix-turn-helix HRD70_15775 PF18073 Rubredoxin metal binding domain HRD70_15780 PF06305 Lipopolysaccharide assembly protein A domain HRD70_15785 PF01569 PAP2 superfamily HRD70_15790 PF00925 GTP cyclohydrolase II HRD70_15795 PF00694 Aconitase C-terminal domain HRD70_15795 PF00330 Aconitase family (aconitate hydratase) HRD70_15810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_15810 PF03466 LysR substrate binding domain HRD70_15815 PF01396 Topoisomerase DNA binding C4 zinc finger HRD70_15815 PF08272 Topoisomerase I zinc-ribbon-like HRD70_15815 PF01131 DNA topoisomerase HRD70_15815 PF01751 Toprim domain HRD70_15820 PF10692 Protein of unknown function (DUF2498) HRD70_15825 PF08496 Peptidase family S49 N-terminal HRD70_15825 PF01343 Peptidase family S49 HRD70_15830 PF00106 short chain dehydrogenase HRD70_15835 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HRD70_15835 PF12557 Cob(I)alamin adenosyltransferase N terminal HRD70_15845 PF01479 S4 domain HRD70_15845 PF00849 RNA pseudouridylate synthase HRD70_15850 PF00072 Response regulator receiver domain HRD70_15850 PF00196 Bacterial regulatory proteins, luxR family HRD70_15865 PF02369 Bacterial Ig-like domain (group 1) HRD70_15865 PF09134 Invasin, domain 3 HRD70_15865 PF11924 Inverse autotransporter, beta-domain HRD70_15875 PF00196 Bacterial regulatory proteins, luxR family HRD70_15875 PF00072 Response regulator receiver domain HRD70_15880 PF03797 Autotransporter beta-domain HRD70_15885 PF01300 Telomere recombination HRD70_15890 PF02811 PHP domain HRD70_15895 PF00425 chorismate binding enzyme HRD70_15895 PF04715 Anthranilate synthase component I, N terminal region HRD70_15900 PF00117 Glutamine amidotransferase class-I HRD70_15905 PF02885 Glycosyl transferase family, helical bundle domain HRD70_15905 PF00591 Glycosyl transferase family, a/b domain HRD70_15910 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HRD70_15910 PF00218 Indole-3-glycerol phosphate synthase HRD70_15915 PF00291 Pyridoxal-phosphate dependent enzyme HRD70_15920 PF00290 Tryptophan synthase alpha chain HRD70_15930 PF03922 OmpW family HRD70_15935 PF03692 Putative zinc- or iron-chelating domain HRD70_15950 PF04279 Intracellular septation protein A HRD70_15955 PF03061 Thioesterase superfamily HRD70_15960 PF03544 Gram-negative bacterial TonB protein C-terminal HRD70_15965 PF03795 YCII-related domain HRD70_15980 PF00563 EAL domain HRD70_15990 PF13396 Phospholipase_D-nuclease N-terminal HRD70_15990 PF13091 PLD-like domain HRD70_15995 PF04269 Protein of unknown function, DUF440 HRD70_16000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRD70_16000 PF00005 ABC transporter HRD70_16005 PF00005 ABC transporter HRD70_16005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRD70_16010 PF12911 N-terminal TM domain of oligopeptide transport permease C HRD70_16010 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_16015 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_16020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRD70_16025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRD70_16030 PF01914 MarC family integral membrane protein HRD70_16035 PF00465 Iron-containing alcohol dehydrogenase HRD70_16035 PF00171 Aldehyde dehydrogenase family HRD70_16040 PF00265 Thymidine kinase HRD70_16045 PF00816 H-NS histone family HRD70_16050 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HRD70_16050 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HRD70_16050 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HRD70_16055 PF00072 Response regulator receiver domain HRD70_16060 PF01734 Patatin-like phospholipase HRD70_16070 PF02810 SEC-C motif HRD70_16075 PF00551 Formyl transferase HRD70_16075 PF01842 ACT domain HRD70_16090 PF03466 LysR substrate binding domain HRD70_16090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_16095 PF03372 Endonuclease/Exonuclease/phosphatase family HRD70_16100 PF00293 NUDIX domain HRD70_16105 PF07383 Protein of unknown function (DUF1496) HRD70_16110 PF01751 Toprim domain HRD70_16110 PF01131 DNA topoisomerase HRD70_16115 PF00586 AIR synthase related protein, N-terminal domain HRD70_16115 PF02769 AIR synthase related protein, C-terminal domain HRD70_16120 PF00881 Nitroreductase family HRD70_16125 PF01343 Peptidase family S49 HRD70_16130 PF00710 Asparaginase, N-terminal HRD70_16130 PF17763 Glutaminase/Asparaginase C-terminal domain HRD70_16135 PF00857 Isochorismatase family HRD70_16140 PF07023 Protein of unknown function (DUF1315) HRD70_16145 PF01641 SelR domain HRD70_16150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HRD70_16150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HRD70_16155 PF01263 Aldose 1-epimerase HRD70_16160 PF06629 MltA-interacting protein MipA HRD70_16165 PF08298 PrkA AAA domain HRD70_16165 PF06798 PrkA serine protein kinase C-terminal domain HRD70_16170 PF04285 Protein of unknown function (DUF444) HRD70_16185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_16185 PF03466 LysR substrate binding domain HRD70_16190 PF05726 Pirin C-terminal cupin domain HRD70_16190 PF02678 Pirin HRD70_16195 PF00563 EAL domain HRD70_16195 PF13426 PAS domain HRD70_16195 PF00990 Diguanylate cyclase, GGDEF domain HRD70_16200 PF07690 Major Facilitator Superfamily HRD70_16205 PF00842 Alanine racemase, C-terminal domain HRD70_16205 PF01168 Alanine racemase, N-terminal domain HRD70_16210 PF01266 FAD dependent oxidoreductase HRD70_16215 PF04293 SpoVR like protein HRD70_16220 PF07840 FadR C-terminal domain HRD70_16220 PF00392 Bacterial regulatory proteins, gntR family HRD70_16225 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HRD70_16230 PF02600 Disulfide bond formation protein DsbB HRD70_16235 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HRD70_16235 PF00132 Bacterial transferase hexapeptide (six repeats) HRD70_16305 PF00717 Peptidase S24-like HRD70_16305 PF01381 Helix-turn-helix HRD70_16400 PF03592 Terminase small subunit HRD70_16400 PF10668 Phage terminase small subunit HRD70_16415 PF00959 Phage lysozyme HRD70_16470 PF03796 DnaB-like helicase C terminal domain HRD70_16470 PF00772 DnaB-like helicase N terminal domain HRD70_16570 PF12684 PDDEXK-like domain of unknown function (DUF3799) HRD70_16570 PF06630 Enterobacterial exodeoxyribonuclease VIII HRD70_16620 PF00589 Phage integrase family HRD70_16620 PF12167 Arm DNA-binding domain HRD70_16625 PF03692 Putative zinc- or iron-chelating domain HRD70_16630 PF01557 Fumarylacetoacetate (FAA) hydrolase family HRD70_16635 PF13406 Transglycosylase SLT domain HRD70_16640 PF05166 YcgL domain HRD70_16650 PF03775 Septum formation inhibitor MinC, C-terminal domain HRD70_16650 PF05209 Septum formation inhibitor MinC, N-terminal domain HRD70_16655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HRD70_16660 PF03776 Septum formation topological specificity factor MinE HRD70_16665 PF01612 3'-5' exonuclease HRD70_16665 PF00570 HRDC domain HRD70_16670 PF13193 AMP-binding enzyme C-terminal domain HRD70_16670 PF00501 AMP-binding enzyme HRD70_16675 PF03843 Outer membrane lipoprotein Slp family HRD70_16680 PF00814 Glycoprotease family HRD70_16685 PF13307 Helicase C-terminal domain HRD70_16685 PF04851 Type III restriction enzyme, res subunit HRD70_16690 PF01042 Endoribonuclease L-PSP HRD70_16695 PF00893 Small Multidrug Resistance protein HRD70_16700 PF00893 Small Multidrug Resistance protein HRD70_16705 PF01081 KDPG and KHG aldolase HRD70_16710 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HRD70_16710 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HRD70_16715 PF01380 SIS domain HRD70_16715 PF01418 Helix-turn-helix domain, rpiR family HRD70_16720 PF00224 Pyruvate kinase, barrel domain HRD70_16720 PF02887 Pyruvate kinase, alpha/beta domain HRD70_16725 PF03279 Bacterial lipid A biosynthesis acyltransferase HRD70_16730 PF08525 Opacity-associated protein A N-terminal motif HRD70_16730 PF01551 Peptidase family M23 HRD70_16730 PF01476 LysM domain HRD70_16735 PF01297 Zinc-uptake complex component A periplasmic HRD70_16740 PF00005 ABC transporter HRD70_16745 PF00950 ABC 3 transport family HRD70_16750 PF05491 RuvB C-terminal winged helix domain HRD70_16750 PF17864 RuvB AAA lid domain HRD70_16750 PF05496 Holliday junction DNA helicase RuvB P-loop domain HRD70_16755 PF01330 RuvA N terminal domain HRD70_16755 PF07499 RuvA, C-terminal domain HRD70_16760 PF02075 Crossover junction endodeoxyribonuclease RuvC HRD70_16765 PF01709 Transcriptional regulator HRD70_16770 PF00293 NUDIX domain HRD70_16775 PF00152 tRNA synthetases class II (D, K and N) HRD70_16775 PF02938 GAD domain HRD70_16775 PF01336 OB-fold nucleic acid binding domain HRD70_16780 PF00857 Isochorismatase family HRD70_16785 PF01904 Protein of unknown function DUF72 HRD70_16790 PF01124 MAPEG family HRD70_16795 PF13649 Methyltransferase domain HRD70_16800 PF08003 Protein of unknown function (DUF1698) HRD70_16805 PF03932 CutC family HRD70_16810 PF06185 YecM protein HRD70_16815 PF05746 DALR anticodon binding domain HRD70_16815 PF03485 Arginyl tRNA synthetase N terminal domain HRD70_16815 PF00750 tRNA synthetases class I (R) HRD70_16825 PF03023 Lipid II flippase MurJ HRD70_16830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HRD70_16835 PF04337 Protein of unknown function, DUF480 HRD70_16840 PF13302 Acetyltransferase (GNAT) domain HRD70_16845 PF07690 Major Facilitator Superfamily HRD70_16850 PF07273 Protein of unknown function (DUF1439) HRD70_16855 PF02613 Nitrate reductase delta subunit HRD70_16860 PF02811 PHP domain HRD70_16865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRD70_16875 PF03009 Glycerophosphoryl diester phosphodiesterase family HRD70_16885 PF00990 Diguanylate cyclase, GGDEF domain HRD70_16890 PF01740 STAS domain HRD70_16890 PF00916 Sulfate permease family HRD70_16895 PF00793 DAHP synthetase I family HRD70_16900 PF13369 Transglutaminase-like superfamily HRD70_16905 PF04247 Invasion gene expression up-regulator, SirB HRD70_16910 PF13847 Methyltransferase domain HRD70_16910 PF17827 PrmC N-terminal domain HRD70_16915 PF03462 PCRF domain HRD70_16915 PF00472 RF-1 domain HRD70_16920 PF01488 Shikimate / quinate 5-dehydrogenase HRD70_16920 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HRD70_16920 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HRD70_16925 PF03550 Outer membrane lipoprotein LolB HRD70_16930 PF08544 GHMP kinases C terminal HRD70_16930 PF00288 GHMP kinases N terminal domain HRD70_16935 PF14572 Phosphoribosyl synthetase-associated domain HRD70_16935 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HRD70_16940 PF10762 Protein of unknown function (DUF2583) HRD70_16945 PF01195 Peptidyl-tRNA hydrolase HRD70_16955 PF01926 50S ribosome-binding GTPase HRD70_16955 PF06071 Protein of unknown function (DUF933) HRD70_16960 PF04237 YjbR HRD70_16965 PF08220 DeoR-like helix-turn-helix domain HRD70_16965 PF00455 DeoR C terminal sensor domain HRD70_16970 PF08013 Tagatose 6 phosphate kinase HRD70_16975 PF03830 PTS system sorbose subfamily IIB component HRD70_16980 PF03609 PTS system sorbose-specific iic component HRD70_16985 PF03613 PTS system mannose/fructose/sorbose family IID component HRD70_16990 PF03610 PTS system fructose IIA component HRD70_16995 PF01380 SIS domain HRD70_17000 PF01116 Fructose-bisphosphate aldolase class-II HRD70_17010 PF01476 LysM domain HRD70_17010 PF01551 Peptidase family M23 HRD70_17020 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HRD70_17025 PF02653 Branched-chain amino acid transport system / permease component HRD70_17030 PF00005 ABC transporter HRD70_17035 PF13407 Periplasmic binding protein domain HRD70_17040 PF05962 HutD HRD70_17045 PF01979 Amidohydrolase family HRD70_17050 PF07702 UTRA domain HRD70_17050 PF00392 Bacterial regulatory proteins, gntR family HRD70_17055 PF01979 Amidohydrolase family HRD70_17065 PF00267 Gram-negative porin HRD70_17070 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HRD70_17075 PF04996 Succinylarginine dihydrolase HRD70_17080 PF00171 Aldehyde dehydrogenase family HRD70_17085 PF04958 Arginine N-succinyltransferase beta subunit HRD70_17100 PF01654 Cytochrome bd terminal oxidase subunit I HRD70_17105 PF02322 Cytochrome bd terminal oxidase subunit II HRD70_17115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_17115 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HRD70_17115 PF00672 HAMP domain HRD70_17115 PF07730 Histidine kinase HRD70_17120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_17120 PF03466 LysR substrate binding domain HRD70_17130 PF01699 Sodium/calcium exchanger protein HRD70_17135 PF02562 PhoH-like protein HRD70_17145 PF13994 PgaD-like protein HRD70_17150 PF00535 Glycosyl transferase family 2 HRD70_17155 PF01522 Polysaccharide deacetylase HRD70_17155 PF14883 Hypothetical glycosyl hydrolase family 13 HRD70_17165 PF00557 Metallopeptidase family M24 HRD70_17165 PF05195 Aminopeptidase P, N-terminal domain HRD70_17170 PF06276 Ferric iron reductase FhuF-like transporter HRD70_17170 PF11575 FhuF 2Fe-2S C-terminal domain HRD70_17175 PF01411 tRNA synthetases class II (A) HRD70_17175 PF02272 DHHA1 domain HRD70_17175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HRD70_17180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_17180 PF03466 LysR substrate binding domain HRD70_17185 PF09313 Domain of unknown function (DUF1971) HRD70_17185 PF03848 Tellurite resistance protein TehB HRD70_17195 PF00578 AhpC/TSA family HRD70_17200 PF12704 MacB-like periplasmic core domain HRD70_17200 PF00005 ABC transporter HRD70_17200 PF02687 FtsX-like permease family HRD70_17210 PF12704 MacB-like periplasmic core domain HRD70_17210 PF00005 ABC transporter HRD70_17210 PF02687 FtsX-like permease family HRD70_17220 PF10634 Fe2+ transport protein HRD70_17225 PF03239 Iron permease FTR1 family HRD70_17235 PF01804 Penicillin amidase HRD70_17245 PF04960 Glutaminase HRD70_17250 PF01261 Xylose isomerase-like TIM barrel HRD70_17255 PF00596 Class II Aldolase and Adducin N-terminal domain HRD70_17260 PF07005 Sugar-binding N-terminal domain HRD70_17260 PF17042 Nucleotide-binding C-terminal domain HRD70_17265 PF00455 DeoR C terminal sensor domain HRD70_17265 PF08220 DeoR-like helix-turn-helix domain HRD70_17270 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HRD70_17270 PF17203 Single cache domain 3 HRD70_17270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_17270 PF00989 PAS fold HRD70_17275 PF00072 Response regulator receiver domain HRD70_17280 PF03390 2-hydroxycarboxylate transporter family HRD70_17285 PF00324 Amino acid permease HRD70_17295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRD70_17305 PF07690 Major Facilitator Superfamily HRD70_17315 PF16168 Adhesin of bacterial autotransporter system, probable stalk HRD70_17315 PF03797 Autotransporter beta-domain HRD70_17315 PF13018 Extended Signal Peptide of Type V secretion system HRD70_17325 PF02899 Phage integrase, N-terminal SAM-like domain HRD70_17325 PF00589 Phage integrase family HRD70_17395 PF00929 Exonuclease HRD70_17400 PF02086 D12 class N6 adenine-specific DNA methyltransferase HRD70_17405 PF00145 C-5 cytosine-specific DNA methylase HRD70_17410 PF05840 Bacteriophage replication gene A protein (GPA) HRD70_17520 PF17482 Phage tail sheath C-terminal domain HRD70_17520 PF04984 Phage tail sheath protein subtilisin-like domain HRD70_17555 PF04606 Ogr/Delta-like zinc finger HRD70_17575 PF01066 CDP-alcohol phosphatidyltransferase HRD70_17580 PF08459 UvrC Helix-hairpin-helix N-terminal HRD70_17580 PF02151 UvrB/uvrC motif HRD70_17580 PF01541 GIY-YIG catalytic domain HRD70_17585 PF00196 Bacterial regulatory proteins, luxR family HRD70_17585 PF00072 Response regulator receiver domain HRD70_17590 PF10769 Protein of unknown function (DUF2594) HRD70_17595 PF06942 GlpM protein HRD70_17605 PF02806 Alpha amylase, C-terminal all-beta domain HRD70_17605 PF00128 Alpha amylase, catalytic domain HRD70_17615 PF08241 Methyltransferase domain HRD70_17620 PF04138 GtrA-like protein HRD70_17625 PF00535 Glycosyl transferase family 2 HRD70_17655 PF00324 Amino acid permease HRD70_17660 PF12833 Helix-turn-helix domain HRD70_17660 PF12852 Cupin HRD70_17665 PF01161 Phosphatidylethanolamine-binding protein HRD70_17670 PF01344 Kelch motif HRD70_17680 PF03358 NADPH-dependent FMN reductase HRD70_17685 PF04261 Dyp-type peroxidase family HRD70_17690 PF09375 Imelysin HRD70_17690 PF13473 Cupredoxin-like domain HRD70_17695 PF03239 Iron permease FTR1 family HRD70_17700 PF00474 Sodium:solute symporter family HRD70_17705 PF01619 Proline dehydrogenase HRD70_17705 PF00171 Aldehyde dehydrogenase family HRD70_17705 PF14850 DNA-binding domain of Proline dehydrogenase HRD70_17705 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HRD70_17735 PF00291 Pyridoxal-phosphate dependent enzyme HRD70_17740 PF02899 Phage integrase, N-terminal SAM-like domain HRD70_17745 PF04539 Sigma-70 region 3 HRD70_17745 PF04545 Sigma-70, region 4 HRD70_17745 PF04542 Sigma-70 region 2 HRD70_17750 PF00700 Bacterial flagellin C-terminal helical region HRD70_17750 PF12445 Flagellin protein HRD70_17750 PF00669 Bacterial flagellin N-terminal helical region HRD70_17755 PF07196 Flagellin hook IN motif HRD70_17755 PF02465 Flagellar hook-associated protein 2 N-terminus HRD70_17755 PF07195 Flagellar hook-associated protein 2 C-terminus HRD70_17760 PF02561 Flagellar protein FliS HRD70_17765 PF05400 Flagellar protein FliT HRD70_17770 PF12833 Helix-turn-helix domain HRD70_17775 PF01966 HD domain HRD70_17780 PF06150 ChaB HRD70_17790 PF00730 HhH-GPD superfamily base excision DNA repair protein HRD70_17795 PF02049 Flagellar hook-basal body complex protein FliE HRD70_17800 PF01514 Secretory protein of YscJ/FliF family HRD70_17800 PF08345 Flagellar M-ring protein C-terminal HRD70_17805 PF14841 FliG middle domain HRD70_17805 PF14842 FliG N-terminal domain HRD70_17805 PF01706 FliG C-terminal domain HRD70_17810 PF02108 Flagellar assembly protein FliH HRD70_17815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRD70_17815 PF18269 T3SS EscN ATPase C-terminal domain HRD70_17825 PF02120 Flagellar hook-length control protein FliK HRD70_17830 PF03748 Flagellar basal body-associated protein FliL HRD70_17835 PF02154 Flagellar motor switch protein FliM HRD70_17835 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HRD70_17840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HRD70_17840 PF16973 Flagellar motor switch protein FliN N-terminal HRD70_17845 PF04347 Flagellar biosynthesis protein, FliO HRD70_17850 PF00813 FliP family HRD70_17855 PF01313 Bacterial export proteins, family 3 HRD70_17860 PF01311 Bacterial export proteins, family 1 HRD70_17865 PF00669 Bacterial flagellin N-terminal helical region HRD70_17870 PF00460 Flagella basal body rod protein HRD70_17870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HRD70_17875 PF10135 Rod binding protein HRD70_17875 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HRD70_17880 PF02119 Flagellar P-ring protein HRD70_17885 PF02107 Flagellar L-ring protein HRD70_17890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HRD70_17890 PF00460 Flagella basal body rod protein HRD70_17895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HRD70_17895 PF00460 Flagella basal body rod protein HRD70_17900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HRD70_17900 PF07559 Flagellar basal body protein FlaE HRD70_17900 PF00460 Flagella basal body rod protein HRD70_17905 PF13860 FlgD Ig-like domain HRD70_17905 PF13861 FlgD Tudor-like domain HRD70_17905 PF03963 Flagellar hook capping protein - N-terminal region HRD70_17910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HRD70_17910 PF00460 Flagella basal body rod protein HRD70_17915 PF00460 Flagella basal body rod protein HRD70_17920 PF13144 Chaperone for flagella basal body P-ring formation HRD70_17920 PF17656 FlgA N-terminal domain HRD70_17925 PF04316 Anti-sigma-28 factor, FlgM HRD70_17930 PF05130 FlgN protein HRD70_17935 PF11924 Inverse autotransporter, beta-domain HRD70_17935 PF07979 Intimin C-type lectin domain HRD70_17935 PF09134 Invasin, domain 3 HRD70_17935 PF02369 Bacterial Ig-like domain (group 1) HRD70_17945 PF06366 Flagellar protein FlhE HRD70_17950 PF00771 FHIPEP family HRD70_17955 PF01312 FlhB HrpN YscU SpaS Family HRD70_17960 PF00082 Subtilase family HRD70_17960 PF01483 Proprotein convertase P-domain HRD70_17965 PF04344 Chemotaxis phosphatase, CheZ HRD70_17970 PF00072 Response regulator receiver domain HRD70_17975 PF00072 Response regulator receiver domain HRD70_17975 PF01339 CheB methylesterase HRD70_17980 PF03705 CheR methyltransferase, all-alpha domain HRD70_17980 PF01739 CheR methyltransferase, SAM binding domain HRD70_17985 PF02203 Tar ligand binding domain homologue HRD70_17985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRD70_17985 PF00672 HAMP domain HRD70_17990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRD70_17990 PF00672 HAMP domain HRD70_17990 PF02203 Tar ligand binding domain homologue HRD70_17995 PF00132 Bacterial transferase hexapeptide (six repeats) HRD70_18000 PF00291 Pyridoxal-phosphate dependent enzyme HRD70_18010 PF02597 ThiS family HRD70_18015 PF00899 ThiF family HRD70_18015 PF00581 Rhodanese-like domain HRD70_18025 PF00266 Aminotransferase class-V HRD70_18030 PF01584 CheW-like domain HRD70_18035 PF09078 CheY binding HRD70_18035 PF01584 CheW-like domain HRD70_18035 PF01627 Hpt domain HRD70_18035 PF02895 Signal transducing histidine kinase, homodimeric domain HRD70_18035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_18040 PF13677 Membrane MotB of proton-channel complex MotA/MotB HRD70_18040 PF00691 OmpA family HRD70_18045 PF01618 MotA/TolQ/ExbB proton channel family HRD70_18050 PF05280 Flagellar transcriptional activator (FlhC) HRD70_18055 PF05247 Flagellar transcriptional activator (FlhD) HRD70_18060 PF00582 Universal stress protein family HRD70_18065 PF16884 N-terminal domain of oxidoreductase HRD70_18065 PF00107 Zinc-binding dehydrogenase HRD70_18070 PF00690 Cation transporter/ATPase, N-terminus HRD70_18070 PF00689 Cation transporting ATPase, C-terminus HRD70_18075 PF02308 MgtC family HRD70_18080 PF02203 Tar ligand binding domain homologue HRD70_18080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRD70_18080 PF00672 HAMP domain HRD70_18085 PF10781 Dextransucrase DSRB HRD70_18090 PF00313 'Cold-shock' DNA-binding domain HRD70_18095 PF00356 Bacterial regulatory proteins, lacI family HRD70_18100 PF02929 Beta galactosidase small chain HRD70_18100 PF02837 Glycosyl hydrolases family 2, sugar binding domain HRD70_18100 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HRD70_18100 PF00703 Glycosyl hydrolases family 2 HRD70_18100 PF16353 Domain of unknown function(DUF4981) HRD70_18105 PF00698 Acyl transferase domain HRD70_18105 PF00107 Zinc-binding dehydrogenase HRD70_18105 PF00109 Beta-ketoacyl synthase, N-terminal domain HRD70_18105 PF02801 Beta-ketoacyl synthase, C-terminal domain HRD70_18105 PF08659 KR domain HRD70_18105 PF08240 Alcohol dehydrogenase GroES-like domain HRD70_18105 PF16197 Ketoacyl-synthetase C-terminal extension HRD70_18105 PF00550 Phosphopantetheine attachment site HRD70_18105 PF14765 Polyketide synthase dehydratase HRD70_18110 PF10777 Inner membrane protein YlaC HRD70_18125 PF14001 YdfZ protein HRD70_18130 PF00328 Histidine phosphatase superfamily (branch 2) HRD70_18135 PF00483 Nucleotidyl transferase HRD70_18140 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HRD70_18145 PF13953 PapC C-terminal domain HRD70_18145 PF13954 PapC N-terminal domain HRD70_18145 PF00577 Outer membrane usher protein HRD70_18165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRD70_18165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRD70_18170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRD70_18170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRD70_18175 PF00294 pfkB family carbohydrate kinase HRD70_18180 PF02653 Branched-chain amino acid transport system / permease component HRD70_18185 PF02653 Branched-chain amino acid transport system / permease component HRD70_18210 PF06167 Glucose-regulated metallo-peptidase M90 HRD70_18220 PF00849 RNA pseudouridylate synthase HRD70_18235 PF01648 4'-phosphopantetheinyl transferase superfamily HRD70_18235 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HRD70_18240 PF03480 Bacterial extracellular solute-binding protein, family 7 HRD70_18250 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HRD70_18255 PF00939 Sodium:sulfate symporter transmembrane region HRD70_18260 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HRD70_18265 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HRD70_18265 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HRD70_18270 PF04223 Citrate lyase, alpha subunit (CitF) HRD70_18275 PF03328 HpcH/HpaI aldolase/citrate lyase family HRD70_18280 PF06857 Malonate decarboxylase delta subunit (MdcD) HRD70_18285 PF08218 Citrate lyase ligase C-terminal domain HRD70_18290 PF00989 PAS fold HRD70_18290 PF17203 Single cache domain 3 HRD70_18290 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HRD70_18290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_18295 PF12431 Transcriptional regulator HRD70_18295 PF00072 Response regulator receiver domain HRD70_18300 PF00072 Response regulator receiver domain HRD70_18300 PF00196 Bacterial regulatory proteins, luxR family HRD70_18305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_18305 PF05231 MASE1 HRD70_18305 PF07730 Histidine kinase HRD70_18325 PF00005 ABC transporter HRD70_18325 PF08402 TOBE domain HRD70_18335 PF00072 Response regulator receiver domain HRD70_18335 PF00196 Bacterial regulatory proteins, luxR family HRD70_18340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_18340 PF00512 His Kinase A (phospho-acceptor) domain HRD70_18340 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRD70_18340 PF00072 Response regulator receiver domain HRD70_18340 PF01627 Hpt domain HRD70_18340 PF00989 PAS fold HRD70_18350 PF02753 Pili assembly chaperone PapD, C-terminal domain HRD70_18350 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HRD70_18355 PF13954 PapC N-terminal domain HRD70_18355 PF13953 PapC C-terminal domain HRD70_18355 PF00577 Outer membrane usher protein HRD70_18365 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HRD70_18365 PF02753 Pili assembly chaperone PapD, C-terminal domain HRD70_18375 PF02653 Branched-chain amino acid transport system / permease component HRD70_18385 PF02653 Branched-chain amino acid transport system / permease component HRD70_18395 PF00005 ABC transporter HRD70_18405 PF00106 short chain dehydrogenase HRD70_18410 PF00248 Aldo/keto reductase family HRD70_18420 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HRD70_18420 PF00132 Bacterial transferase hexapeptide (six repeats) HRD70_18425 PF00072 Response regulator receiver domain HRD70_18425 PF01584 CheW-like domain HRD70_18430 PF03466 LysR substrate binding domain HRD70_18430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_18435 PF00144 Beta-lactamase HRD70_18445 PF08220 DeoR-like helix-turn-helix domain HRD70_18445 PF00455 DeoR C terminal sensor domain HRD70_18455 PF02581 Thiamine monophosphate synthase HRD70_18475 PF01554 MatE HRD70_18480 PF00764 Arginosuccinate synthase HRD70_18485 PF03825 Nucleoside H+ symporter HRD70_18490 PF01048 Phosphorylase superfamily HRD70_18500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_18500 PF03466 LysR substrate binding domain HRD70_18505 PF02277 Phosphoribosyltransferase HRD70_18510 PF00300 Histidine phosphatase superfamily (branch 1) HRD70_18515 PF02654 Cobalamin-5-phosphate synthase HRD70_18520 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HRD70_18525 PF07685 CobB/CobQ-like glutamine amidotransferase domain HRD70_18530 PF00005 ABC transporter HRD70_18535 PF02361 Cobalt transport protein HRD70_18540 PF02553 Cobalt transport protein component CbiN HRD70_18545 PF01891 Cobalt uptake substrate-specific transmembrane region HRD70_18550 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRD70_18555 PF06180 Cobalt chelatase (CbiK) HRD70_18560 PF02571 Precorrin-6x reductase CbiJ/CobK HRD70_18565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRD70_18570 PF11761 Cobalamin biosynthesis central region HRD70_18570 PF01890 Cobalamin synthesis G C-terminus HRD70_18570 PF11760 Cobalamin synthesis G N-terminal HRD70_18575 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRD70_18580 PF05175 Methyltransferase small domain HRD70_18585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRD70_18590 PF01888 CbiD HRD70_18595 PF02570 Precorrin-8X methylmutase HRD70_18600 PF03186 CobD/Cbib protein HRD70_18605 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HRD70_18605 PF07685 CobB/CobQ-like glutamine amidotransferase domain HRD70_18610 PF10114 Sensory domain found in PocR HRD70_18610 PF12833 Helix-turn-helix domain HRD70_18615 PF00230 Major intrinsic protein HRD70_18620 PF00936 BMC domain HRD70_18625 PF00936 BMC domain HRD70_18630 PF02286 Dehydratase large subunit HRD70_18635 PF02288 Dehydratase medium subunit HRD70_18640 PF02287 Dehydratase small subunit HRD70_18645 PF18427 DD-reactivating factor swiveling domain HRD70_18645 PF08841 Diol dehydratase reactivase ATPase-like domain HRD70_18655 PF00936 BMC domain HRD70_18665 PF06130 Phosphate propanoyltransferase HRD70_18675 PF03319 Ethanolamine utilisation protein EutN/carboxysome HRD70_18680 PF01923 Cobalamin adenosyltransferase HRD70_18685 PF00171 Aldehyde dehydrogenase family HRD70_18690 PF00465 Iron-containing alcohol dehydrogenase HRD70_18695 PF13237 4Fe-4S dicluster domain HRD70_18695 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HRD70_18695 PF13375 RnfC Barrel sandwich hybrid domain HRD70_18695 PF10531 SLBB domain HRD70_18705 PF00936 BMC domain HRD70_18710 PF10662 Ethanolamine utilisation - propanediol utilisation HRD70_18715 PF00871 Acetokinase family HRD70_18720 PF10414 Sirohaem synthase dimerisation region HRD70_18720 PF14824 Sirohaem biosynthesis protein central HRD70_18720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRD70_18725 PF00155 Aminotransferase class I and II HRD70_18730 PF00288 GHMP kinases N terminal domain HRD70_18735 PF13407 Periplasmic binding protein domain HRD70_18740 PF00005 ABC transporter HRD70_18745 PF02653 Branched-chain amino acid transport system / permease component HRD70_18750 PF02653 Branched-chain amino acid transport system / permease component HRD70_18755 PF04363 Protein of unknown function (DUF496) HRD70_18760 PF04632 Fusaric acid resistance protein family HRD70_18765 PF00550 Phosphopantetheine attachment site HRD70_18765 PF07993 Male sterility protein HRD70_18765 PF00501 AMP-binding enzyme HRD70_18770 PF08411 Exonuclease C-terminal HRD70_18770 PF00929 Exonuclease HRD70_18775 PF13520 Amino acid permease HRD70_18780 PF00465 Iron-containing alcohol dehydrogenase HRD70_18785 PF00005 ABC transporter HRD70_18790 PF02653 Branched-chain amino acid transport system / permease component HRD70_18795 PF01370 NAD dependent epimerase/dehydratase family HRD70_18805 PF08029 HisG, C-terminal domain HRD70_18805 PF01634 ATP phosphoribosyltransferase HRD70_18810 PF00815 Histidinol dehydrogenase HRD70_18815 PF00155 Aminotransferase class I and II HRD70_18820 PF00475 Imidazoleglycerol-phosphate dehydratase HRD70_18825 PF00117 Glutamine amidotransferase class-I HRD70_18830 PF00977 Histidine biosynthesis protein HRD70_18835 PF00977 Histidine biosynthesis protein HRD70_18840 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HRD70_18840 PF01502 Phosphoribosyl-AMP cyclohydrolase HRD70_18845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HRD70_18845 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HRD70_18850 PF00483 Nucleotidyl transferase HRD70_18855 PF00483 Nucleotidyl transferase HRD70_18860 PF00571 CBS domain HRD70_18860 PF03741 Integral membrane protein TerC family HRD70_18860 PF03471 Transporter associated domain HRD70_18865 PF03606 C4-dicarboxylate anaerobic carrier HRD70_18870 PF05170 AsmA family HRD70_18875 PF00692 dUTPase HRD70_18880 PF00485 Phosphoribulokinase / Uridine kinase family HRD70_18885 PF10609 NUBPL iron-transfer P-loop NTPase HRD70_18890 PF09334 tRNA synthetases class I (M) HRD70_18890 PF01588 Putative tRNA binding domain HRD70_18910 PF07690 Major Facilitator Superfamily HRD70_18915 PF03788 LrgA family HRD70_18920 PF04172 LrgB-like family HRD70_18925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HRD70_18925 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HRD70_18935 PF00390 Malic enzyme, N-terminal domain HRD70_18935 PF03949 Malic enzyme, NAD binding domain HRD70_18940 PF02698 DUF218 domain HRD70_18945 PF01455 HupF/HypC family HRD70_18950 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HRD70_18955 PF12798 4Fe-4S binding domain HRD70_18955 PF00037 4Fe-4S binding domain HRD70_18960 PF00361 Proton-conducting membrane transporter HRD70_18965 PF00146 NADH dehydrogenase HRD70_18970 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HRD70_18970 PF00361 Proton-conducting membrane transporter HRD70_18975 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HRD70_18980 PF00361 Proton-conducting membrane transporter HRD70_18980 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HRD70_18985 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HRD70_18985 PF00374 Nickel-dependent hydrogenase HRD70_18985 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HRD70_18990 PF12838 4Fe-4S dicluster domain HRD70_18995 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HRD70_19000 PF07450 Formate hydrogenlyase maturation protein HycH HRD70_19005 PF01750 Hydrogenase maturation protease HRD70_19010 PF13247 4Fe-4S dicluster domain HRD70_19010 PF12800 4Fe-4S binding domain HRD70_19015 PF00384 Molybdopterin oxidoreductase HRD70_19015 PF01568 Molydopterin dinucleotide binding domain HRD70_19015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRD70_19020 PF01590 GAF domain HRD70_19020 PF00158 Sigma-54 interaction domain HRD70_19025 PF01226 Formate/nitrite transporter HRD70_19030 PF02653 Branched-chain amino acid transport system / permease component HRD70_19035 PF00005 ABC transporter HRD70_19040 PF13407 Periplasmic binding protein domain HRD70_19045 PF00356 Bacterial regulatory proteins, lacI family HRD70_19050 PF04235 Protein of unknown function (DUF418) HRD70_19055 PF01227 GTP cyclohydrolase I HRD70_19060 PF06779 Uncharacterised MFS-type transporter YbfB HRD70_19065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_19065 PF03466 LysR substrate binding domain HRD70_19070 PF00107 Zinc-binding dehydrogenase HRD70_19070 PF08240 Alcohol dehydrogenase GroES-like domain HRD70_19075 PF00756 Putative esterase HRD70_19105 PF00083 Sugar (and other) transporter HRD70_19115 PF03453 MoeA N-terminal region (domain I and II) HRD70_19115 PF00994 Probable molybdopterin binding domain HRD70_19115 PF03454 MoeA C-terminal region (domain IV) HRD70_19120 PF00899 ThiF family HRD70_19125 PF00005 ABC transporter HRD70_19125 PF12848 ABC transporter HRD70_19135 PF13505 Outer membrane protein beta-barrel domain HRD70_19140 PF00892 EamA-like transporter family HRD70_19150 PF02469 Fasciclin domain HRD70_19165 PF13847 Methyltransferase domain HRD70_19170 PF00210 Ferritin-like domain HRD70_19175 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRD70_19180 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_19185 PF00005 ABC transporter HRD70_19190 PF13426 PAS domain HRD70_19190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRD70_19190 PF08447 PAS fold HRD70_19195 PF05971 RNA methyltransferase HRD70_19215 PF02885 Glycosyl transferase family, helical bundle domain HRD70_19220 PF03466 LysR substrate binding domain HRD70_19220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_19225 PF07690 Major Facilitator Superfamily HRD70_19230 PF00230 Major intrinsic protein HRD70_19235 PF00270 DEAD/DEAH box helicase HRD70_19235 PF06733 DEAD_2 HRD70_19235 PF13307 Helicase C-terminal domain HRD70_19240 PF00267 Gram-negative porin HRD70_19250 PF00892 EamA-like transporter family HRD70_19265 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_19270 PF00005 ABC transporter HRD70_19275 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_19280 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HRD70_19295 PF00581 Rhodanese-like domain HRD70_19300 PF07308 Protein of unknown function (DUF1456) HRD70_19305 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_19310 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_19320 PF00005 ABC transporter HRD70_19325 PF04226 Transglycosylase associated protein HRD70_19335 PF01844 HNH endonuclease HRD70_19340 PF01928 CYTH domain HRD70_19345 PF01565 FAD binding domain HRD70_19345 PF09330 D-lactate dehydrogenase, membrane binding HRD70_19350 PF00768 D-alanyl-D-alanine carboxypeptidase HRD70_19360 PF00571 CBS domain HRD70_19360 PF01769 Divalent cation transporter HRD70_19360 PF03448 MgtE intracellular N domain HRD70_19370 PF01207 Dihydrouridine synthase (Dus) HRD70_19375 PF00271 Helicase conserved C-terminal domain HRD70_19375 PF00270 DEAD/DEAH box helicase HRD70_19380 PF09209 Tetracyclin repressor-like, C-terminal domain HRD70_19380 PF00440 Bacterial regulatory proteins, tetR family HRD70_19385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRD70_19390 PF00005 ABC transporter HRD70_19405 PF01027 Inhibitor of apoptosis-promoting Bax1 HRD70_19410 PF02391 MoaE protein HRD70_19415 PF02597 ThiS family HRD70_19420 PF01967 MoaC family HRD70_19425 PF06463 Molybdenum Cofactor Synthesis C HRD70_19425 PF04055 Radical SAM superfamily HRD70_19430 PF01933 Uncharacterised protein family UPF0052 HRD70_19435 PF09905 DNA-binding protein VF530 HRD70_19440 PF00271 Helicase conserved C-terminal domain HRD70_19440 PF04851 Type III restriction enzyme, res subunit HRD70_19440 PF02151 UvrB/uvrC motif HRD70_19440 PF17757 UvrB interaction domain HRD70_19440 PF12344 Ultra-violet resistance protein B HRD70_19445 PF00005 ABC transporter HRD70_19455 PF08241 Methyltransferase domain HRD70_19460 PF00155 Aminotransferase class I and II HRD70_19465 PF04055 Radical SAM superfamily HRD70_19465 PF06968 Biotin and Thiamin Synthesis associated domain HRD70_19470 PF00202 Aminotransferase class-III HRD70_19475 PF10282 Lactonase, 7-bladed beta-propeller HRD70_19485 PF03459 TOBE domain HRD70_19485 PF00005 ABC transporter HRD70_19490 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_19500 PF10766 Multidrug efflux pump-associated protein AcrZ HRD70_19505 PF03459 TOBE domain HRD70_19505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_19510 PF00005 ABC transporter HRD70_19520 PF16363 GDP-mannose 4,6 dehydratase HRD70_19525 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HRD70_19525 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HRD70_19530 PF10509 Galactokinase galactose-binding signature HRD70_19530 PF08544 GHMP kinases C terminal HRD70_19530 PF00288 GHMP kinases N terminal domain HRD70_19535 PF01263 Aldose 1-epimerase HRD70_19545 PF00300 Histidine phosphatase superfamily (branch 1) HRD70_19550 PF00793 DAHP synthetase I family HRD70_19555 PF01545 Cation efflux family HRD70_19560 PF04973 Nicotinamide mononucleotide transporter HRD70_19565 PF02445 Quinolinate synthetase A protein HRD70_19605 PF13174 Tetratricopeptide repeat HRD70_19605 PF16331 TolA binding protein trimerisation HRD70_19610 PF00691 OmpA family HRD70_19615 PF07676 WD40-like Beta Propeller Repeat HRD70_19615 PF04052 TolB amino-terminal domain HRD70_19620 PF06519 TolA C-terminal HRD70_19620 PF06519 TolA C-terminal HRD70_19625 PF02472 Biopolymer transport protein ExbD/TolR HRD70_19630 PF01618 MotA/TolQ/ExbB proton channel family HRD70_19635 PF03061 Thioesterase superfamily HRD70_19640 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HRD70_19645 PF08173 Membrane bound YbgT-like protein HRD70_19650 PF02322 Cytochrome bd terminal oxidase subunit II HRD70_19655 PF01654 Cytochrome bd terminal oxidase subunit I HRD70_19660 PF00149 Calcineurin-like phosphoesterase HRD70_19660 PF02872 5'-nucleotidase, C-terminal domain HRD70_19665 PF02629 CoA binding domain HRD70_19665 PF00549 CoA-ligase HRD70_19670 PF08442 ATP-grasp domain HRD70_19670 PF00549 CoA-ligase HRD70_19675 PF02817 e3 binding domain HRD70_19675 PF00364 Biotin-requiring enzyme HRD70_19675 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HRD70_19680 PF16870 2-oxoglutarate dehydrogenase C-terminal HRD70_19680 PF00676 Dehydrogenase E1 component HRD70_19680 PF02779 Transketolase, pyrimidine binding domain HRD70_19680 PF16078 2-oxoglutarate dehydrogenase N-terminus HRD70_19685 PF13085 2Fe-2S iron-sulfur cluster binding domain HRD70_19690 PF00890 FAD binding domain HRD70_19690 PF02910 Fumarate reductase flavoprotein C-term HRD70_19695 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HRD70_19700 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HRD70_19705 PF00285 Citrate synthase, C-terminal domain HRD70_19710 PF01470 Pyroglutamyl peptidase HRD70_19725 PF03746 LamB/YcsF family HRD70_19730 PF02626 Carboxyltransferase domain, subdomain A and B HRD70_19735 PF02682 Carboxyltransferase domain, subdomain C and D HRD70_19740 PF01784 NIF3 (NGG1p interacting factor 3) HRD70_19745 PF02112 cAMP phosphodiesterases class-II HRD70_19750 PF00875 DNA photolyase HRD70_19750 PF03441 FAD binding domain of DNA photolyase HRD70_19755 PF08349 Protein of unknown function (DUF1722) HRD70_19760 PF16671 Actin cross-linking domain HRD70_19760 PF16671 Actin cross-linking domain HRD70_19760 PF11647 Membrane Localization Domain HRD70_19760 PF12146 Serine aminopeptidase, S33 HRD70_19760 PF11713 Peptidase C80 family HRD70_19760 PF07634 RtxA repeat HRD70_19760 PF12146 Serine aminopeptidase, S33 HRD70_19760 PF11647 Membrane Localization Domain HRD70_19760 PF11713 Peptidase C80 family HRD70_19760 PF07634 RtxA repeat HRD70_19765 PF02794 RTX toxin acyltransferase family HRD70_19775 PF10725 Protein of unknown function (DUF2517) HRD70_19780 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) HRD70_19785 PF03814 Potassium-transporting ATPase A subunit HRD70_19795 PF02669 K+-transporting ATPase, c chain HRD70_19800 PF13493 Domain of unknown function (DUF4118) HRD70_19800 PF13492 GAF domain HRD70_19800 PF02702 Osmosensitive K+ channel His kinase sensor domain HRD70_19800 PF00512 His Kinase A (phospho-acceptor) domain HRD70_19800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_19805 PF00486 Transcriptional regulatory protein, C terminal HRD70_19805 PF00072 Response regulator receiver domain HRD70_19820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRD70_19820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRD70_19820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRD70_19820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRD70_19825 PF03925 SeqA protein C-terminal domain HRD70_19825 PF17206 SeqA protein N-terminal domain HRD70_19830 PF00672 HAMP domain HRD70_19830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRD70_19830 PF02203 Tar ligand binding domain homologue HRD70_19835 PF12697 Alpha/beta hydrolase family HRD70_19840 PF01402 Ribbon-helix-helix protein, copG family HRD70_19845 PF00672 HAMP domain HRD70_19845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRD70_19845 PF02203 Tar ligand binding domain homologue HRD70_19850 PF00258 Flavodoxin HRD70_19855 PF01475 Ferric uptake regulator family HRD70_19860 PF03173 Putative carbohydrate binding domain HRD70_19860 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain HRD70_19860 PF00728 Glycosyl hydrolase family 20, catalytic domain HRD70_19860 PF02838 Glycosyl hydrolase family 20, domain 2 HRD70_19865 PF13982 YbfN-like lipoprotein HRD70_19870 PF03573 outer membrane porin, OprD family HRD70_19880 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HRD70_19880 PF02378 Phosphotransferase system, EIIC HRD70_19880 PF00367 phosphotransferase system, EIIB HRD70_19885 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HRD70_19890 PF01979 Amidohydrolase family HRD70_19895 PF00480 ROK family HRD70_19895 PF01047 MarR family HRD70_19900 PF13344 Haloacid dehalogenase-like hydrolase HRD70_19905 PF00733 Asparagine synthase HRD70_19905 PF13537 Glutamine amidotransferase domain HRD70_19940 PF01494 FAD binding domain HRD70_19945 PF00919 Uncharacterized protein family UPF0004 HRD70_19945 PF01938 TRAM domain HRD70_19945 PF04055 Radical SAM superfamily HRD70_19950 PF02562 PhoH-like protein HRD70_19955 PF02130 Uncharacterized protein family UPF0054 HRD70_19960 PF00571 CBS domain HRD70_19960 PF03471 Transporter associated domain HRD70_19965 PF00795 Carbon-nitrogen hydrolase HRD70_19975 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRD70_19980 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_19985 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_19990 PF00005 ABC transporter HRD70_19995 PF01156 Inosine-uridine preferring nucleoside hydrolase HRD70_20000 PF07295 Zinc-ribbon containing domain HRD70_20005 PF13603 Leucyl-tRNA synthetase, Domain 2 HRD70_20005 PF08264 Anticodon-binding domain of tRNA HRD70_20005 PF00133 tRNA synthetases class I (I, L, M and V) HRD70_20010 PF04390 Lipopolysaccharide-assembly HRD70_20015 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HRD70_20015 PF06144 DNA polymerase III, delta subunit HRD70_20020 PF01467 Cytidylyltransferase-like HRD70_20030 PF02590 Predicted SPOUT methyltransferase HRD70_20035 PF03717 Penicillin-binding Protein dimerisation domain HRD70_20035 PF00905 Penicillin binding protein transpeptidase domain HRD70_20040 PF01098 Cell cycle protein HRD70_20045 PF05036 Sporulation related domain HRD70_20045 PF03330 Lytic transglycolase HRD70_20050 PF00768 D-alanyl-D-alanine carboxypeptidase HRD70_20050 PF07943 Penicillin-binding protein 5, C-terminal domain HRD70_20055 PF04359 Protein of unknown function (DUF493) HRD70_20060 PF03099 Biotin/lipoate A/B protein ligase family HRD70_20065 PF04055 Radical SAM superfamily HRD70_20065 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HRD70_20070 PF02416 mttA/Hcf106 family HRD70_20075 PF00990 Diguanylate cyclase, GGDEF domain HRD70_20075 PF05230 MASE2 domain HRD70_20080 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HRD70_20085 PF00313 'Cold-shock' DNA-binding domain HRD70_20090 PF00313 'Cold-shock' DNA-binding domain HRD70_20095 PF00196 Bacterial regulatory proteins, luxR family HRD70_20105 PF03459 TOBE domain HRD70_20120 PF00664 ABC transporter transmembrane region HRD70_20120 PF00005 ABC transporter HRD70_20125 PF00440 Bacterial regulatory proteins, tetR family HRD70_20130 PF00703 Glycosyl hydrolases family 2 HRD70_20130 PF02837 Glycosyl hydrolases family 2, sugar binding domain HRD70_20130 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HRD70_20140 PF03573 outer membrane porin, OprD family HRD70_20145 PF08007 Cupin superfamily protein HRD70_20160 PF02040 Arsenical pump membrane protein HRD70_20165 PF06953 Arsenical resistance operon trans-acting repressor ArsD HRD70_20170 PF01022 Bacterial regulatory protein, arsR family HRD70_20280 PF03245 Bacteriophage Rz lysis protein HRD70_20370 PF01381 Helix-turn-helix HRD70_20370 PF00717 Peptidase S24-like HRD70_20430 PF12684 PDDEXK-like domain of unknown function (DUF3799) HRD70_20430 PF06630 Enterobacterial exodeoxyribonuclease VIII HRD70_20470 PF01555 DNA methylase HRD70_20485 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HRD70_20485 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HRD70_20495 PF09190 DALR domain HRD70_20495 PF01406 tRNA synthetases class I (C) catalytic domain HRD70_20500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HRD70_20505 PF00149 Calcineurin-like phosphoesterase HRD70_20510 PF00731 AIR carboxylase HRD70_20515 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HRD70_20515 PF02222 ATP-grasp domain HRD70_20525 PF00005 ABC transporter HRD70_20530 PF13472 GDSL-like Lipase/Acylhydrolase family HRD70_20535 PF00106 short chain dehydrogenase HRD70_20540 PF00085 Thioredoxin HRD70_20545 PF16200 C-terminal region of band_7 HRD70_20545 PF01145 SPFH domain / Band 7 family HRD70_20550 PF01957 NfeD-like C-terminal, partner-binding HRD70_20555 PF13411 MerR HTH family regulatory protein HRD70_20560 PF00403 Heavy-metal-associated domain HRD70_20565 PF01963 TraB family HRD70_20570 PF04073 Aminoacyl-tRNA editing domain HRD70_20575 PF00149 Calcineurin-like phosphoesterase HRD70_20575 PF02872 5'-nucleotidase, C-terminal domain HRD70_20580 PF07690 Major Facilitator Superfamily HRD70_20585 PF02254 TrkA-N domain HRD70_20585 PF00999 Sodium/hydrogen exchanger family HRD70_20590 PF00294 pfkB family carbohydrate kinase HRD70_20595 PF16363 GDP-mannose 4,6 dehydratase HRD70_20600 PF00534 Glycosyl transferases group 1 HRD70_20600 PF13439 Glycosyltransferase Family 4 HRD70_20605 PF02719 Polysaccharide biosynthesis protein HRD70_20610 PF00953 Glycosyl transferase family 4 HRD70_20615 PF13439 Glycosyltransferase Family 4 HRD70_20615 PF00534 Glycosyl transferases group 1 HRD70_20620 PF00534 Glycosyl transferases group 1 HRD70_20620 PF13439 Glycosyltransferase Family 4 HRD70_20625 PF00535 Glycosyl transferase family 2 HRD70_20630 PF01501 Glycosyl transferase family 8 HRD70_20630 PF00535 Glycosyl transferase family 2 HRD70_20635 PF01943 Polysaccharide biosynthesis protein HRD70_20640 PF00762 Ferrochelatase HRD70_20645 PF05191 Adenylate kinase, active site lid HRD70_20650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_20650 PF00183 Hsp90 protein HRD70_20655 PF13662 Toprim domain HRD70_20655 PF02132 RecR protein HRD70_20660 PF02575 YbaB/EbfC DNA-binding family HRD70_20665 PF12170 DNA polymerase III tau subunit V interacting with alpha HRD70_20665 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HRD70_20665 PF12169 DNA polymerase III subunits gamma and tau domain III HRD70_20685 PF13018 Extended Signal Peptide of Type V secretion system HRD70_20685 PF05860 haemagglutination activity domain HRD70_20685 PF04829 Pre-toxin domain with VENN motif HRD70_20685 PF13332 Hemagglutinin repeat HRD70_20690 PF05860 haemagglutination activity domain HRD70_20690 PF04829 Pre-toxin domain with VENN motif HRD70_20690 PF13332 Hemagglutinin repeat HRD70_20705 PF04829 Pre-toxin domain with VENN motif HRD70_20705 PF05860 haemagglutination activity domain HRD70_20705 PF13332 Hemagglutinin repeat HRD70_20715 PF13018 Extended Signal Peptide of Type V secretion system HRD70_20715 PF13332 Hemagglutinin repeat HRD70_20715 PF05860 haemagglutination activity domain HRD70_20715 PF04829 Pre-toxin domain with VENN motif HRD70_20720 PF08479 POTRA domain, ShlB-type HRD70_20720 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HRD70_20720 PF17287 POTRA domain HRD70_20725 PF00156 Phosphoribosyl transferase domain HRD70_20730 PF04304 Protein of unknown function (DUF454) HRD70_20740 PF10689 Protein of unknown function (DUF2496) HRD70_20745 PF12794 Mechanosensitive ion channel inner membrane domain 1 HRD70_20745 PF00924 Mechanosensitive ion channel HRD70_20745 PF12795 Mechanosensitive ion channel porin domain HRD70_20750 PF02635 DsrE/DsrF-like family HRD70_20755 PF00440 Bacterial regulatory proteins, tetR family HRD70_20755 PF08361 MAATS-type transcriptional repressor, C-terminal region HRD70_20760 PF00529 HlyD membrane-fusion protein of T1SS HRD70_20760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRD70_20765 PF00873 AcrB/AcrD/AcrF family HRD70_20775 PF01168 Alanine racemase, N-terminal domain HRD70_20780 PF01676 Metalloenzyme superfamily HRD70_20785 PF10941 Protein of unknown function DUF2620 HRD70_20790 PF10797 Protein of unknown function HRD70_20795 PF01197 Ribosomal protein L31 HRD70_20800 PF00444 Ribosomal protein L36 HRD70_20805 PF01297 Zinc-uptake complex component A periplasmic HRD70_20810 PF00950 ABC 3 transport family HRD70_20815 PF00005 ABC transporter HRD70_20825 PF10757 Biofilm formation regulator YbaJ HRD70_20830 PF05321 Haemolysin expression modulating protein HRD70_20840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HRD70_20845 PF09619 Type III secretion system lipoprotein chaperone (YscW) HRD70_20855 PF00909 Ammonium Transporter Family HRD70_20860 PF00543 Nitrogen regulatory protein P-II HRD70_20865 PF00005 ABC transporter HRD70_20865 PF00664 ABC transporter transmembrane region HRD70_20870 PF00005 ABC transporter HRD70_20870 PF00664 ABC transporter transmembrane region HRD70_20875 PF01037 Lrp/AsnC ligand binding domain HRD70_20875 PF13404 AsnC-type helix-turn-helix domain HRD70_20890 PF12793 Sugar transport-related sRNA regulator N-term HRD70_20890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRD70_20895 PF06508 Queuosine biosynthesis protein QueC HRD70_20910 PF13145 PPIC-type PPIASE domain HRD70_20915 PF00216 Bacterial DNA-binding protein HRD70_20920 PF02190 ATP-dependent protease La (LON) substrate-binding domain HRD70_20920 PF05362 Lon protease (S16) C-terminal proteolytic domain HRD70_20920 PF00004 ATPase family associated with various cellular activities (AAA) HRD70_20925 PF10431 C-terminal, D2-small domain, of ClpB protein HRD70_20925 PF06689 ClpX C4-type zinc finger HRD70_20925 PF07724 AAA domain (Cdc48 subfamily) HRD70_20930 PF00574 Clp protease HRD70_20935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRD70_20935 PF05697 Bacterial trigger factor protein (TF) HRD70_20935 PF05698 Bacterial trigger factor protein (TF) C-terminus HRD70_20940 PF01722 BolA-like protein HRD70_20945 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HRD70_20945 PF03923 Uncharacterized lipoprotein HRD70_20950 PF07690 Major Facilitator Superfamily HRD70_20960 PF03502 Nucleoside-specific channel-forming protein, Tsx HRD70_20965 PF06481 COX Aromatic Rich Motif HRD70_20965 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HRD70_20970 PF00115 Cytochrome C and Quinol oxidase polypeptide I HRD70_20975 PF00510 Cytochrome c oxidase subunit III HRD70_20980 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HRD70_20985 PF01040 UbiA prenyltransferase family HRD70_20990 PF07690 Major Facilitator Superfamily HRD70_20995 PF04461 Protein of unknown function (DUF520) HRD70_21000 PF08546 Ketopantoate reductase PanE/ApbA C terminal HRD70_21000 PF02558 Ketopantoate reductase PanE/ApbA HRD70_21005 PF01965 DJ-1/PfpI family HRD70_21010 PF02926 THUMP domain HRD70_21010 PF02568 Thiamine biosynthesis protein (ThiI) HRD70_21015 PF02609 Exonuclease VII small subunit HRD70_21020 PF00348 Polyprenyl synthetase HRD70_21025 PF02780 Transketolase, C-terminal domain HRD70_21025 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HRD70_21025 PF02779 Transketolase, pyrimidine binding domain HRD70_21030 PF04608 Phosphatidylglycerophosphatase A HRD70_21035 PF02769 AIR synthase related protein, C-terminal domain HRD70_21035 PF00586 AIR synthase related protein, N-terminal domain HRD70_21040 PF01029 NusB family HRD70_21045 PF00885 6,7-dimethyl-8-ribityllumazine synthase HRD70_21050 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HRD70_21050 PF01872 RibD C-terminal domain HRD70_21055 PF03477 ATP cone domain HRD70_21065 PF02355 Protein export membrane protein HRD70_21065 PF07549 SecD/SecF GG Motif HRD70_21070 PF02355 Protein export membrane protein HRD70_21070 PF07549 SecD/SecF GG Motif HRD70_21070 PF13721 SecD export protein N-terminal TM region HRD70_21075 PF02699 Preprotein translocase subunit HRD70_21080 PF01702 Queuine tRNA-ribosyltransferase HRD70_21225 PF00959 Phage lysozyme HRD70_21260 PF00149 Calcineurin-like phosphoesterase HRD70_21315 PF00717 Peptidase S24-like HRD70_21315 PF01381 Helix-turn-helix HRD70_21320 PF01726 LexA DNA binding domain HRD70_21320 PF00717 Peptidase S24-like HRD70_21350 PF12684 PDDEXK-like domain of unknown function (DUF3799) HRD70_21350 PF06630 Enterobacterial exodeoxyribonuclease VIII HRD70_21400 PF00589 Phage integrase family HRD70_21405 PF02547 Queuosine biosynthesis protein HRD70_21410 PF04336 Acyl carrier protein phosphodiesterase HRD70_21415 PF10417 C-terminal domain of 1-Cys peroxiredoxin HRD70_21415 PF00578 AhpC/TSA family HRD70_21430 PF00128 Alpha amylase, catalytic domain HRD70_21430 PF02903 Alpha amylase, N-terminal ig-like domain HRD70_21435 PF00324 Amino acid permease HRD70_21440 PF05525 Branched-chain amino acid transport protein HRD70_21450 PF11808 Phosphate regulon sensor protein PhoR HRD70_21450 PF00989 PAS fold HRD70_21450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRD70_21450 PF00512 His Kinase A (phospho-acceptor) domain HRD70_21455 PF00072 Response regulator receiver domain HRD70_21455 PF00486 Transcriptional regulatory protein, C terminal HRD70_21460 PF12320 Type 5 capsule protein repressor C-terminal domain HRD70_21460 PF00149 Calcineurin-like phosphoesterase HRD70_21465 PF13476 AAA domain HRD70_21470 PF00480 ROK family HRD70_21475 PF04381 Putative exonuclease, RdgC HRD70_21480 PF06865 Pyrimidine/purine nucleoside phosphorylase HRD70_21485 PF01202 Shikimate kinase HRD70_21490 PF07715 TonB-dependent Receptor Plug Domain HRD70_21490 PF00593 TonB dependent receptor HRD70_21495 PF01497 Periplasmic binding protein HRD70_21510 PF08241 Methyltransferase domain HRD70_21525 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain HRD70_21525 PF10091 Putative glucoamylase HRD70_21525 PF06165 Glycosyltransferase family 36 HRD70_21530 PF07238 PilZ domain HRD70_21530 PF07317 Flagellar regulator YcgR HRD70_21535 PF11975 Family 4 glycosyl hydrolase C-terminal domain HRD70_21535 PF02056 Family 4 glycosyl hydrolase HRD70_21540 PF00367 phosphotransferase system, EIIB HRD70_21540 PF02378 Phosphotransferase system, EIIC HRD70_21545 PF00392 Bacterial regulatory proteins, gntR family HRD70_21545 PF07702 UTRA domain HRD70_21550 PF07662 Na+ dependent nucleoside transporter C-terminus HRD70_21550 PF01773 Na+ dependent nucleoside transporter N-terminus HRD70_21555 PF04227 Indigoidine synthase A like protein HRD70_21560 PF00294 pfkB family carbohydrate kinase HRD70_21565 PF00171 Aldehyde dehydrogenase family HRD70_21570 PF01472 PUA domain HRD70_21570 PF00696 Amino acid kinase family HRD70_21575 PF07417 Sigma factor-binding transcriptional regulator Crl HRD70_21585 PF00156 Phosphoribosyl transferase domain HRD70_21590 PF01467 Cytidylyltransferase-like HRD70_21595 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HRD70_21600 PF00534 Glycosyl transferases group 1 HRD70_21605 PF00534 Glycosyl transferases group 1 HRD70_21605 PF13439 Glycosyltransferase Family 4 HRD70_21630 PF02719 Polysaccharide biosynthesis protein HRD70_21630 PF08485 Polysaccharide biosynthesis protein C-terminal HRD70_21635 PF01370 NAD dependent epimerase/dehydratase family HRD70_21640 PF02350 UDP-N-acetylglucosamine 2-epimerase HRD70_21650 PF02706 Chain length determinant protein HRD70_21655 PF07687 Peptidase dimerisation domain HRD70_21655 PF01546 Peptidase family M20/M25/M40 HRD70_21660 PF00817 impB/mucB/samB family HRD70_21660 PF11799 impB/mucB/samB family C-terminal domain HRD70_21660 PF11798 IMS family HHH motif HRD70_21670 PF00291 Pyridoxal-phosphate dependent enzyme HRD70_21675 PF08348 YheO-like PAS domain HRD70_21675 PF13309 HTH domain HRD70_21680 PF01820 D-ala D-ala ligase N-terminus HRD70_21680 PF07478 D-ala D-ala ligase C-terminus HRD70_21690 PF04400 (Na+)-NQR maturation NqrM HRD70_21695 PF02424 ApbE family HRD70_21700 PF00970 Oxidoreductase FAD-binding domain HRD70_21700 PF00111 2Fe-2S iron-sulfur cluster binding domain HRD70_21700 PF00175 Oxidoreductase NAD-binding domain HRD70_21705 PF02508 Rnf-Nqr subunit, membrane protein HRD70_21710 PF02508 Rnf-Nqr subunit, membrane protein HRD70_21715 PF04205 FMN-binding domain HRD70_21720 PF03116 NQR2, RnfD, RnfE family HRD70_21725 PF11973 NQRA C-terminal domain HRD70_21725 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HRD70_21730 PF03734 L,D-transpeptidase catalytic domain HRD70_21735 PF13230 Glutamine amidotransferases class-II HRD70_21740 PF13580 SIS domain HRD70_21745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRD70_21745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRD70_21745 PF09317 Domain of unknown function (DUF1974) HRD70_21750 PF18254 HMW1 domain 2 HRD70_21750 PF18071 HMW1C N-terminal HRD70_21760 PF08479 POTRA domain, ShlB-type HRD70_21760 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HRD70_21765 PF01636 Phosphotransferase enzyme family HRD70_21770 PF01008 Initiation factor 2 subunit family HRD70_21775 PF03079 ARD/ARD' family HRD70_21785 PF00596 Class II Aldolase and Adducin N-terminal domain HRD70_21795 PF00155 Aminotransferase class I and II HRD70_21800 PF00795 Carbon-nitrogen hydrolase HRD70_21805 PF07687 Peptidase dimerisation domain HRD70_21805 PF01546 Peptidase family M20/M25/M40 HRD70_21810 PF00266 Aminotransferase class-V HRD70_21815 PF00005 ABC transporter HRD70_21820 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_21825 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_21830 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRD70_21850 PF01425 Amidase HRD70_21880 PF03466 LysR substrate binding domain HRD70_21880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRD70_21885 PF07690 Major Facilitator Superfamily HRD70_21890 PF03591 AzlC protein HRD70_21895 PF05437 Branched-chain amino acid transport protein (AzlD) HRD70_21900 PF01047 MarR family HRD70_21905 PF02321 Outer membrane efflux protein HRD70_21910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRD70_21910 PF00529 HlyD membrane-fusion protein of T1SS HRD70_21915 PF07690 Major Facilitator Superfamily HRD70_21920 PF00588 SpoU rRNA Methylase family HRD70_21920 PF08032 RNA 2'-O ribose methyltransferase substrate binding HRD70_21925 PF00085 Thioredoxin HRD70_21940 PF13091 PLD-like domain HRD70_21945 PF10043 Predicted periplasmic lipoprotein (DUF2279) HRD70_21985 PF00005 ABC transporter HRD70_21985 PF09383 NIL domain HRD70_21990 PF00528 Binding-protein-dependent transport system inner membrane component HRD70_21995 PF03180 NLPA lipoprotein HRD70_22000 PF16358 RcsF lipoprotein HRD70_22005 PF18389 TrmO C-terminal domain HRD70_22005 PF01980 tRNA-methyltransferase O HRD70_22010 PF03129 Anticodon binding domain HRD70_22010 PF04073 Aminoacyl-tRNA editing domain HRD70_22010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRD70_22015 PF17185 NlpE C-terminal OB domain HRD70_22015 PF04170 NlpE N-terminal domain HRD70_22020 PF00472 RF-1 domain HRD70_22025 PF07152 YaeQ protein HRD70_22030 PF06786 Uncharacterised protein family (UPF0253) HRD70_22035 PF07073 Modulator of Rho-dependent transcription termination (ROF) HRD70_22040 PF00034 Cytochrome c HRD70_22045 PF11734 TilS substrate C-terminal domain HRD70_22045 PF09179 TilS substrate binding domain HRD70_22045 PF01171 PP-loop family HRD70_22050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRD70_22060 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HRD70_22065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HRD70_22065 PF07733 Bacterial DNA polymerase III alpha NTPase domain HRD70_22065 PF01336 OB-fold nucleic acid binding domain HRD70_22065 PF14579 Helix-hairpin-helix motif HRD70_22065 PF02811 PHP domain HRD70_22070 PF01351 Ribonuclease HII HRD70_22075 PF02684 Lipid-A-disaccharide synthetase HRD70_22080 PF00132 Bacterial transferase hexapeptide (six repeats) HRD70_22080 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HRD70_22085 PF07977 FabA-like domain HRD70_22090 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HRD70_22090 PF00132 Bacterial transferase hexapeptide (six repeats) HRD70_22095 PF03938 Outer membrane protein (OmpH-like) HRD70_22100 PF01103 Surface antigen HRD70_22100 PF07244 Surface antigen variable number repeat HRD70_22105 PF02163 Peptidase family M50 HRD70_22105 PF17820 PDZ domain HRD70_22115 PF01255 Putative undecaprenyl diphosphate synthase HRD70_22120 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HRD70_22120 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HRD70_22120 PF13288 DXP reductoisomerase C-terminal domain HRD70_22125 PF01765 Ribosome recycling factor HRD70_22130 PF00696 Amino acid kinase family HRD70_22135 PF00889 Elongation factor TS HRD70_22140 PF00318 Ribosomal protein S2 HRD70_22145 PF00557 Metallopeptidase family M24