DA391_00005 SM00382 ATPases associated with a variety of cellular activities DA391_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain DA391_00010 SM00480 DNA polymerase III beta subunit DA391_00020 SM00387 Histidine kinase-like ATPases DA391_00020 SM00433 TopoisomeraseII DA391_00080 SM00642 Alpha-amylase domain DA391_00195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DA391_00195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_00195 SM01358 DA391_00195 DA391_00215 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA391_00245 SM00342 helix_turn_helix, arabinose operon control protein DA391_00290 SM00382 ATPases associated with a variety of cellular activities DA391_00300 SM00342 helix_turn_helix, arabinose operon control protein DA391_00315 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DA391_00325 SM00478 endonuclease III DA391_00500 SM00052 Putative diguanylate phosphodiesterase DA391_00530 SM01022 DA391_00530 DA391_00545 SM00235 Zinc-dependent metalloprotease DA391_00550 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DA391_00580 SM00421 helix_turn_helix, Lux Regulon DA391_00660 SM00354 helix_turn _helix lactose operon repressor DA391_00680 SM00859 Semialdehyde dehydrogenase, NAD binding domain DA391_00690 SM00642 Alpha-amylase domain DA391_00695 SM00642 Alpha-amylase domain DA391_00730 SM00420 helix_turn_helix, Deoxyribose operon repressor DA391_00730 SM01134 DA391_00730 DA391_00740 SM00450 Rhodanese Homology Domain DA391_00750 SM00421 helix_turn_helix, Lux Regulon DA391_00795 SM00899 DA391_00795 DA391_00800 SM00316 Ribosomal protein S1-like RNA-binding domain DA391_00800 SM00732 Likely ribonuclease with RNase H fold. DA391_00810 SM00448 cheY-homologous receiver domain DA391_00810 SM00862 Transcriptional regulatory protein, C terminal DA391_00815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_00815 SM00387 Histidine kinase-like ATPases DA391_00815 SM00388 His Kinase A (phosphoacceptor) domain DA391_00865 SM00363 S4 RNA-binding domain DA391_00910 SM00965 Secretin and TonB N terminus short domain DA391_00995 SM00354 helix_turn _helix lactose operon repressor DA391_01025 SM00421 helix_turn_helix, Lux Regulon DA391_01060 SM00421 helix_turn_helix, Lux Regulon DA391_01065 SM00869 Autotransporter beta-domain DA391_01075 SM00100 Cyclic nucleotide-monophosphate binding domain DA391_01075 SM00419 helix_turn_helix, cAMP Regulatory protein DA391_01110 SM00062 Bacterial periplasmic substrate-binding proteins DA391_01115 SM00382 ATPases associated with a variety of cellular activities DA391_01135 SM00382 ATPases associated with a variety of cellular activities DA391_01200 SM00838 Elongation factor G C-terminus DA391_01200 SM00889 Elongation factor G, domain IV DA391_01225 SM01403 DA391_01225 DA391_01245 SM01382 DA391_01245 DA391_01245 SM01383 DA391_01245 DA391_01260 SM00322 K homology RNA-binding domain DA391_01280 SM01374 DA391_01280 DA391_01285 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DA391_01350 SM00363 S4 RNA-binding domain DA391_01350 SM01390 DA391_01350 DA391_01355 SM00662 RNA polymerases D DA391_01370 SM00422 helix_turn_helix, mercury resistance DA391_01490 SM00346 helix_turn_helix isocitrate lyase regulation DA391_01495 SM01018 B12 binding domain DA391_01540 SM00382 ATPases associated with a variety of cellular activities DA391_01565 SM00563 Phosphate acyltransferases DA391_01590 SM00869 Autotransporter beta-domain DA391_01605 SM00829 Enoylreductase DA391_01610 SM00382 ATPases associated with a variety of cellular activities DA391_01615 SM01005 Alanine racemase, C-terminal domain DA391_01680 SM00382 ATPases associated with a variety of cellular activities DA391_01695 SM00062 Bacterial periplasmic substrate-binding proteins DA391_01715 SM00382 ATPases associated with a variety of cellular activities DA391_01745 SM00357 Cold shock protein domain DA391_01750 SM00357 Cold shock protein domain DA391_01765 SM00267 diguanylate cyclase DA391_01800 SM00878 Biotin carboxylase C-terminal domain DA391_01825 SM00829 Enoylreductase DA391_01830 SM00052 Putative diguanylate phosphodiesterase DA391_01830 SM00267 diguanylate cyclase DA391_01855 SM00316 Ribosomal protein S1-like RNA-binding domain DA391_01990 SM00831 Cation transporter/ATPase, N-terminus DA391_01995 SM00354 helix_turn _helix lactose operon repressor DA391_02005 SM00642 Alpha-amylase domain DA391_02020 SM00460 Transglutaminase/protease-like homologues DA391_02080 SM00382 ATPases associated with a variety of cellular activities DA391_02110 SM00382 ATPases associated with a variety of cellular activities DA391_02145 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DA391_02150 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DA391_02205 SM00729 Elongator protein 3, MiaB family, Radical SAM DA391_02210 SM00073 Histidine Phosphotransfer domain DA391_02210 SM00091 PAS domain DA391_02210 SM00387 Histidine kinase-like ATPases DA391_02210 SM00388 His Kinase A (phosphoacceptor) domain DA391_02210 SM00448 cheY-homologous receiver domain DA391_02230 SM00749 bacterial OsmY and nodulation domain DA391_02285 SM00829 Enoylreductase DA391_02345 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA391_02345 SM00895 DA391_02345 DA391_02365 SM00858 DA391_02365 DA391_02405 SM00869 Autotransporter beta-domain DA391_02420 SM00346 helix_turn_helix isocitrate lyase regulation DA391_02455 SM00347 helix_turn_helix multiple antibiotic resistance protein DA391_02655 SM00857 Resolvase, N terminal domain DA391_02720 SM00400 zinc finger DA391_02720 SM00493 DA391_02720 DA391_02720 SM00766 DNA primase DnaG DnaB-binding DA391_02735 SM01207 DA391_02735 DA391_02740 SM00905 Dihydroneopterin aldolase DA391_02750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DA391_02755 SM00287 Bacterial SH3 domain homologues DA391_02760 SM01118 DA391_02760 DA391_02835 SM00387 Histidine kinase-like ATPases DA391_02835 SM00433 TopoisomeraseII DA391_02855 SM00434 DNA Topoisomerase IV DA391_02860 SM00563 Phosphate acyltransferases DA391_02880 SM00729 Elongator protein 3, MiaB family, Radical SAM DA391_02895 SM00342 helix_turn_helix, arabinose operon control protein DA391_03030 SM00382 ATPases associated with a variety of cellular activities DA391_03060 SM00354 helix_turn _helix lactose operon repressor DA391_03070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DA391_03070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_03215 SM00869 Autotransporter beta-domain DA391_03230 SM00354 helix_turn _helix lactose operon repressor DA391_03255 SM00382 ATPases associated with a variety of cellular activities DA391_03320 SM00420 helix_turn_helix, Deoxyribose operon repressor DA391_03320 SM01134 DA391_03320 DA391_03345 SM00382 ATPases associated with a variety of cellular activities DA391_03350 SM00382 ATPases associated with a variety of cellular activities DA391_03450 SM00382 ATPases associated with a variety of cellular activities DA391_03450 SM01086 C-terminal, D2-small domain, of ClpB protein DA391_03470 SM00257 Lysin motif DA391_03525 SM00028 Tetratricopeptide repeats DA391_03570 SM00257 Lysin motif DA391_03570 SM00634 Bacterial Ig-like domain (group 1) DA391_03580 SM00014 Acid phosphatase homologues DA391_03635 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA391_03660 SM00382 ATPases associated with a variety of cellular activities DA391_03690 SM00155 Phospholipase D. Active site motifs. DA391_03690 SM00634 Bacterial Ig-like domain (group 1) DA391_03705 SM00421 helix_turn_helix, Lux Regulon DA391_03720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DA391_03720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_03720 SM00319 Homologues of the ligand binding domain of Tar DA391_03725 SM00421 helix_turn_helix, Lux Regulon DA391_03725 SM00448 cheY-homologous receiver domain DA391_03755 SM00858 DA391_03755 DA391_03800 SM00047 Lysozyme subfamily 2 DA391_03840 SM00073 Histidine Phosphotransfer domain DA391_03840 SM00260 Two component signalling adaptor domain DA391_03840 SM00387 Histidine kinase-like ATPases DA391_03840 SM01231 DA391_03840 DA391_03845 SM00260 Two component signalling adaptor domain DA391_03855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DA391_03855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_03905 SM00448 cheY-homologous receiver domain DA391_03910 SM00448 cheY-homologous receiver domain DA391_03915 SM00138 Methyltransferase, chemotaxis proteins DA391_03940 SM00382 ATPases associated with a variety of cellular activities DA391_03995 SM00862 Transcriptional regulatory protein, C terminal DA391_04085 SM00530 Helix-turn-helix XRE-family like proteins DA391_04120 SM00421 helix_turn_helix, Lux Regulon DA391_04160 SM00478 endonuclease III DA391_04160 SM00525 DA391_04160 DA391_04185 SM00729 Elongator protein 3, MiaB family, Radical SAM DA391_04195 SM01152 DA391_04195 DA391_04215 SM00382 ATPases associated with a variety of cellular activities DA391_04230 SM00732 Likely ribonuclease with RNase H fold. DA391_04255 SM00731 SprT homologues. DA391_04260 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DA391_04295 SM00861 Transketolase, pyrimidine binding domain DA391_04300 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DA391_04315 SM00194 Protein tyrosine phosphatase, catalytic domain DA391_04315 SM00404 Protein tyrosine phosphatase, catalytic domain motif DA391_04370 SM01011 Aminopeptidase P, N-terminal domain DA391_04400 SM00822 DA391_04400 DA391_04425 SM00448 cheY-homologous receiver domain DA391_04425 SM00862 Transcriptional regulatory protein, C terminal DA391_04430 SM00387 Histidine kinase-like ATPases DA391_04430 SM00388 His Kinase A (phosphoacceptor) domain DA391_04500 SM00091 PAS domain DA391_04500 SM00267 diguanylate cyclase DA391_04505 SM00344 helix_turn_helix ASNC type DA391_04525 SM00354 helix_turn _helix lactose operon repressor DA391_04530 SM00271 DnaJ molecular chaperone homology domain DA391_04540 SM00822 DA391_04540 DA391_04560 SM00862 Transcriptional regulatory protein, C terminal DA391_04580 SM00849 Metallo-beta-lactamase superfamily DA391_04610 SM00354 helix_turn _helix lactose operon repressor DA391_04620 SM00563 Phosphate acyltransferases DA391_04630 SM00530 Helix-turn-helix XRE-family like proteins DA391_04645 SM00927 DNA mismatch repair enzyme MutH DA391_04660 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DA391_04720 SM00646 DA391_04720 DA391_04740 SM00925 MltA specific insert domain DA391_04780 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DA391_04780 SM00475 5'-3' exonuclease DA391_04830 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DA391_04880 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DA391_04890 SM00935 Outer membrane protein (OmpH-like) DA391_04920 SM00481 DNA polymerase alpha chain like domain DA391_04935 SM00977 TilS substrate C-terminal domain DA391_04955 SM01322 DA391_04955 DA391_04995 SM00382 ATPases associated with a variety of cellular activities DA391_04995 SM00930 DA391_04995 DA391_05055 SM00257 Lysin motif DA391_05060 SM00849 Metallo-beta-lactamase superfamily DA391_05075 SM00479 DA391_05075 DA391_05095 SM00382 ATPases associated with a variety of cellular activities DA391_05125 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA391_05170 SM00382 ATPases associated with a variety of cellular activities DA391_05175 SM00382 ATPases associated with a variety of cellular activities DA391_05200 SM00988 UreE urease accessory protein, N-terminal domain DA391_05270 SM00342 helix_turn_helix, arabinose operon control protein DA391_05295 SM00965 Secretin and TonB N terminus short domain DA391_05315 SM00382 ATPases associated with a variety of cellular activities DA391_05330 SM00422 helix_turn_helix, mercury resistance DA391_05370 SM00530 Helix-turn-helix XRE-family like proteins DA391_05450 SM00986 Uracil DNA glycosylase superfamily DA391_05450 SM00987 UreE urease accessory protein, C-terminal domain DA391_05465 SM00487 DEAD-like helicases superfamily DA391_05465 SM00490 helicase superfamily c-terminal domain DA391_05515 SM00358 Double-stranded RNA binding motif DA391_05515 SM00535 Ribonuclease III family DA391_05560 SM00062 Bacterial periplasmic substrate-binding proteins DA391_05565 SM01211 DA391_05565 DA391_05575 SM00387 Histidine kinase-like ATPases DA391_05575 SM00388 His Kinase A (phosphoacceptor) domain DA391_05585 SM00382 ATPases associated with a variety of cellular activities DA391_05585 SM00448 cheY-homologous receiver domain DA391_05595 SM00938 Nitrogen regulatory protein P-II DA391_05695 SM00271 DnaJ molecular chaperone homology domain DA391_05725 SM00869 Autotransporter beta-domain DA391_05730 SM01359 DA391_05730 DA391_05730 SM01360 DA391_05730 DA391_05740 SM00247 Beta/gamma crystallins DA391_05745 SM00562 DA391_05745 DA391_05755 SM00028 Tetratricopeptide repeats DA391_05760 SM00530 Helix-turn-helix XRE-family like proteins DA391_05780 SM00564 beta-propeller repeat DA391_05805 SM00116 Domain in cystathionine beta-synthase and other proteins. DA391_05805 SM01240 DA391_05805 DA391_05820 SM00862 Transcriptional regulatory protein, C terminal DA391_05830 SM00421 helix_turn_helix, Lux Regulon DA391_05890 SM00116 Domain in cystathionine beta-synthase and other proteins. DA391_05895 SM00420 helix_turn_helix, Deoxyribose operon repressor DA391_05895 SM01134 DA391_05895 DA391_05925 SM00046 Diacylglycerol kinase catalytic domain (presumed) DA391_05940 SM00448 cheY-homologous receiver domain DA391_05940 SM00862 Transcriptional regulatory protein, C terminal DA391_05945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_05945 SM00387 Histidine kinase-like ATPases DA391_05945 SM00388 His Kinase A (phosphoacceptor) domain DA391_05995 SM00052 Putative diguanylate phosphodiesterase DA391_05995 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DA391_05995 SM00091 PAS domain DA391_05995 SM00267 diguanylate cyclase DA391_06000 SM00116 Domain in cystathionine beta-synthase and other proteins. DA391_06000 SM00924 MgtE intracellular N domain DA391_06030 SM00382 ATPases associated with a variety of cellular activities DA391_06095 SM01130 DA391_06095 DA391_06155 SM00421 helix_turn_helix, Lux Regulon DA391_06160 SM00028 Tetratricopeptide repeats DA391_06175 SM00382 ATPases associated with a variety of cellular activities DA391_06195 SM00421 helix_turn_helix, Lux Regulon DA391_06195 SM00448 cheY-homologous receiver domain DA391_06210 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DA391_06230 SM00919 Malic enzyme, NAD binding domain DA391_06230 SM01274 DA391_06230 DA391_06255 SM00382 ATPases associated with a variety of cellular activities DA391_06280 SM00450 Rhodanese Homology Domain DA391_06285 SM00822 DA391_06285 DA391_06305 SM01130 DA391_06305 DA391_06355 SM00382 ATPases associated with a variety of cellular activities DA391_06400 SM00382 ATPases associated with a variety of cellular activities DA391_06410 SM00382 ATPases associated with a variety of cellular activities DA391_06420 SM00448 cheY-homologous receiver domain DA391_06420 SM00862 Transcriptional regulatory protein, C terminal DA391_06425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_06425 SM00387 Histidine kinase-like ATPases DA391_06425 SM00388 His Kinase A (phosphoacceptor) domain DA391_06455 SM00771 ZipA, C-terminal domain (FtsZ-binding) DA391_06460 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DA391_06460 SM00292 breast cancer carboxy-terminal domain DA391_06460 SM00532 Ligase N family DA391_06590 SM00448 cheY-homologous receiver domain DA391_06590 SM00850 LytTr DNA-binding domain DA391_06595 SM00387 Histidine kinase-like ATPases DA391_06645 SM00855 Phosphoglycerate mutase family DA391_06685 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DA391_06690 SM01061 CAT RNA binding domain DA391_06730 SM00382 ATPases associated with a variety of cellular activities DA391_06750 SM00867 YceI-like domain DA391_06755 SM00354 helix_turn _helix lactose operon repressor DA391_06820 SM00062 Bacterial periplasmic substrate-binding proteins DA391_06820 SM00387 Histidine kinase-like ATPases DA391_06820 SM00388 His Kinase A (phosphoacceptor) domain DA391_06820 SM00448 cheY-homologous receiver domain DA391_06825 SM00421 helix_turn_helix, Lux Regulon DA391_06825 SM00448 cheY-homologous receiver domain DA391_06845 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DA391_06855 SM00421 helix_turn_helix, Lux Regulon DA391_06855 SM00448 cheY-homologous receiver domain DA391_06880 SM00382 ATPases associated with a variety of cellular activities DA391_06975 SM00463 Small MutS-related domain DA391_07020 SM00825 Beta-ketoacyl synthase DA391_07025 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DA391_07025 SM00091 PAS domain DA391_07025 SM00267 diguanylate cyclase DA391_07080 SM00342 helix_turn_helix, arabinose operon control protein DA391_07090 SM00859 Semialdehyde dehydrogenase, NAD binding domain DA391_07140 SM00062 Bacterial periplasmic substrate-binding proteins DA391_07155 SM00382 ATPases associated with a variety of cellular activities DA391_07165 SM00052 Putative diguanylate phosphodiesterase DA391_07195 SM00729 Elongator protein 3, MiaB family, Radical SAM DA391_07195 SM00876 Biotin and Thiamin Synthesis associated domain DA391_07215 SM00382 ATPases associated with a variety of cellular activities DA391_07220 SM00487 DEAD-like helicases superfamily DA391_07220 SM00490 helicase superfamily c-terminal domain DA391_07235 SM00729 Elongator protein 3, MiaB family, Radical SAM DA391_07270 SM00923 MbtH-like protein DA391_07275 SM00823 Phosphopantetheine attachment site DA391_07275 SM00824 Thioesterase DA391_07320 SM00382 ATPases associated with a variety of cellular activities DA391_07335 SM00487 DEAD-like helicases superfamily DA391_07335 SM00490 helicase superfamily c-terminal domain DA391_07360 SM01118 DA391_07360 DA391_07365 SM00507 HNH nucleases DA391_07380 SM00382 ATPases associated with a variety of cellular activities DA391_07425 SM00382 ATPases associated with a variety of cellular activities DA391_07430 SM00450 Rhodanese Homology Domain DA391_07455 SM00382 ATPases associated with a variety of cellular activities DA391_07500 SM00487 DEAD-like helicases superfamily DA391_07500 SM00488 DA391_07500 DA391_07500 SM00491 DA391_07500 DA391_07525 SM00903 Flavin reductase like domain DA391_07535 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DA391_07535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DA391_07540 SM00382 ATPases associated with a variety of cellular activities DA391_07550 SM00062 Bacterial periplasmic substrate-binding proteins DA391_07550 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DA391_07580 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. DA391_07620 SM00382 ATPases associated with a variety of cellular activities DA391_07630 SM00852 Probable molybdopterin binding domain DA391_07650 SM00829 Enoylreductase DA391_07675 SM00354 helix_turn _helix lactose operon repressor DA391_07685 SM00382 ATPases associated with a variety of cellular activities DA391_07700 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DA391_07700 SM00382 ATPases associated with a variety of cellular activities DA391_07705 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DA391_07790 SM00919 Malic enzyme, NAD binding domain DA391_07790 SM01274 DA391_07790 DA391_07855 SM01091 Transporter associated domain DA391_07875 SM00382 ATPases associated with a variety of cellular activities DA391_07920 SM01350 DA391_07920 DA391_07980 SM00382 ATPases associated with a variety of cellular activities DA391_08030 SM00382 ATPases associated with a variety of cellular activities DA391_08065 SM00877 DA391_08065 DA391_08070 SM00877 DA391_08070 DA391_08110 SM00877 DA391_08110 DA391_08115 SM00877 DA391_08115 DA391_08145 SM00877 DA391_08145 DA391_08150 SM00877 DA391_08150 DA391_08160 SM00342 helix_turn_helix, arabinose operon control protein DA391_08240 SM00382 ATPases associated with a variety of cellular activities DA391_08260 SM00855 Phosphoglycerate mutase family DA391_08300 SM00260 Two component signalling adaptor domain DA391_08300 SM00448 cheY-homologous receiver domain DA391_08355 SM00363 S4 RNA-binding domain DA391_08385 SM00062 Bacterial periplasmic substrate-binding proteins DA391_08385 SM00387 Histidine kinase-like ATPases DA391_08385 SM00388 His Kinase A (phosphoacceptor) domain DA391_08385 SM00448 cheY-homologous receiver domain DA391_08390 SM00421 helix_turn_helix, Lux Regulon DA391_08390 SM00448 cheY-homologous receiver domain DA391_08400 SM00382 ATPases associated with a variety of cellular activities DA391_08420 SM00387 Histidine kinase-like ATPases DA391_08425 SM00421 helix_turn_helix, Lux Regulon DA391_08425 SM00448 cheY-homologous receiver domain DA391_08430 SM00448 cheY-homologous receiver domain DA391_08435 SM00091 PAS domain DA391_08435 SM00387 Histidine kinase-like ATPases DA391_08440 SM00764 Citrate lyase ligase C-terminal domain DA391_08560 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DA391_08570 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DA391_08570 SM00382 ATPases associated with a variety of cellular activities DA391_08575 SM00849 Metallo-beta-lactamase superfamily DA391_08595 SM00344 helix_turn_helix ASNC type DA391_08665 SM00344 helix_turn_helix ASNC type DA391_08675 SM00829 Enoylreductase DA391_08680 SM01038 Beta galactosidase small chain DA391_08685 SM00354 helix_turn _helix lactose operon repressor DA391_08690 SM00357 Cold shock protein domain DA391_08700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DA391_08700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_08710 SM00831 Cation transporter/ATPase, N-terminus DA391_08715 SM00829 Enoylreductase DA391_08745 SM00073 Histidine Phosphotransfer domain DA391_08745 SM00260 Two component signalling adaptor domain DA391_08745 SM00387 Histidine kinase-like ATPases DA391_08745 SM01231 DA391_08745 DA391_08750 SM00260 Two component signalling adaptor domain DA391_08760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DA391_08760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_08760 SM00319 Homologues of the ligand binding domain of Tar DA391_08765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DA391_08765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_08765 SM00319 Homologues of the ligand binding domain of Tar DA391_08770 SM00138 Methyltransferase, chemotaxis proteins DA391_08775 SM00448 cheY-homologous receiver domain DA391_08780 SM00448 cheY-homologous receiver domain DA391_08815 SM00858 DA391_08815 DA391_08860 SM00047 Lysozyme subfamily 2 DA391_08920 SM00382 ATPases associated with a variety of cellular activities DA391_09010 SM00382 ATPases associated with a variety of cellular activities DA391_09060 SM00530 Helix-turn-helix XRE-family like proteins DA391_09240 SM00635 Bacterial Ig-like domain 2 DA391_09310 SM00060 Fibronectin type 3 domain DA391_09330 SM00478 endonuclease III DA391_09335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DA391_09340 SM00342 helix_turn_helix, arabinose operon control protein DA391_09385 SM00062 Bacterial periplasmic substrate-binding proteins DA391_09385 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DA391_09395 SM00382 ATPases associated with a variety of cellular activities DA391_09460 SM00903 Flavin reductase like domain DA391_09530 SM00642 Alpha-amylase domain DA391_09550 SM00421 helix_turn_helix, Lux Regulon DA391_09550 SM00448 cheY-homologous receiver domain DA391_09555 SM00465 GIY-YIG type nucleases (URI domain) DA391_09600 SM00530 Helix-turn-helix XRE-family like proteins DA391_09635 SM00507 HNH nucleases DA391_09675 SM00507 HNH nucleases DA391_09735 SM00635 Bacterial Ig-like domain 2 DA391_09765 SM00232 JAB/MPN domain DA391_09780 SM00060 Fibronectin type 3 domain DA391_09795 SM00869 Autotransporter beta-domain DA391_09835 SM00998 Adenylosuccinate lyase C-terminus DA391_09865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DA391_09865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DA391_09905 SM00895 DA391_09905 DA391_09920 SM00342 helix_turn_helix, arabinose operon control protein DA391_09940 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DA391_09940 SM00091 PAS domain DA391_09940 SM00267 diguanylate cyclase DA391_09945 SM00090 RIO-like kinase DA391_09950 SM00382 ATPases associated with a variety of cellular activities DA391_09965 SM00342 helix_turn_helix, arabinose operon control protein DA391_10015 SM00357 Cold shock protein domain DA391_10040 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DA391_10040 SM00091 PAS domain DA391_10040 SM00267 diguanylate cyclase DA391_10080 SM00116 Domain in cystathionine beta-synthase and other proteins. DA391_10080 SM01091 Transporter associated domain DA391_10115 SM00487 DEAD-like helicases superfamily DA391_10115 SM00490 helicase superfamily c-terminal domain DA391_10125 SM01022 DA391_10125 DA391_10140 SM00479 DA391_10140 DA391_10190 SM00869 Autotransporter beta-domain DA391_10230 SM01022 DA391_10230 DA391_10240 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DA391_10240 SM00091 PAS domain DA391_10240 SM00267 diguanylate cyclase DA391_10245 SM00972 Spore Coat Protein U domain DA391_10260 SM00972 Spore Coat Protein U domain DA391_10265 SM00972 Spore Coat Protein U domain DA391_10270 SM00972 Spore Coat Protein U domain DA391_10295 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DA391_10300 SM00945 ProQ/FINO family DA391_10305 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DA391_10305 SM00245 tail specific protease DA391_10325 SM00346 helix_turn_helix isocitrate lyase regulation DA391_10330 SM00644 DA391_10330 DA391_10355 SM00382 ATPases associated with a variety of cellular activities DA391_10410 SM00382 ATPases associated with a variety of cellular activities DA391_10445 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DA391_10475 SM00382 ATPases associated with a variety of cellular activities DA391_10480 SM00346 helix_turn_helix isocitrate lyase regulation DA391_10500 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DA391_10525 SM00873 B3/4 domain DA391_10525 SM00874 tRNA synthetase B5 domain DA391_10525 SM00896 Ferredoxin-fold anticodon binding domain DA391_10530 SM00411 bacterial (prokaryotic) histone like domain DA391_10545 SM01005 Alanine racemase, C-terminal domain DA391_10550 SM00387 Histidine kinase-like ATPases DA391_10550 SM00388 His Kinase A (phosphoacceptor) domain DA391_10555 SM00448 cheY-homologous receiver domain DA391_10555 SM00862 Transcriptional regulatory protein, C terminal DA391_10570 SM00052 Putative diguanylate phosphodiesterase DA391_10570 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DA391_10570 SM00091 PAS domain DA391_10570 SM00267 diguanylate cyclase DA391_10595 SM00763 PrkA AAA domain DA391_10625 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DA391_10645 SM00870 DA391_10645 DA391_10665 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DA391_10665 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DA391_10665 SM00493 DA391_10665 DA391_10725 SM00448 cheY-homologous receiver domain DA391_10730 SM00984 UDP binding domain DA391_10735 SM00528 Domain in histone-like proteins of HNS family DA391_10775 SM00382 ATPases associated with a variety of cellular activities DA391_10780 SM00382 ATPases associated with a variety of cellular activities DA391_10790 SM00155 Phospholipase D. Active site motifs. DA391_10800 SM00052 Putative diguanylate phosphodiesterase DA391_10845 SM00749 bacterial OsmY and nodulation domain DA391_10885 SM00481 DNA polymerase alpha chain like domain DA391_10895 SM00869 Autotransporter beta-domain DA391_10900 SM00421 helix_turn_helix, Lux Regulon DA391_10910 SM00363 S4 RNA-binding domain DA391_10920 SM00822 DA391_10920 DA391_10940 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DA391_10940 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DA391_10940 SM00493 DA391_10940 DA391_10965 SM00014 Acid phosphatase homologues DA391_10975 SM00028 Tetratricopeptide repeats DA391_10990 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DA391_11005 SM01007 Class II Aldolase and Adducin N-terminal domain DA391_11015 SM00420 helix_turn_helix, Deoxyribose operon repressor DA391_11015 SM01134 DA391_11015 DA391_11045 SM00357 Cold shock protein domain DA391_11045 SM00955 DA391_11045 DA391_11055 SM00478 endonuclease III DA391_11055 SM00525 DA391_11055 DA391_11065 SM00900 DA391_11065 DA391_11075 SM00342 helix_turn_helix, arabinose operon control protein DA391_11105 SM00382 ATPases associated with a variety of cellular activities DA391_11115 SM00382 ATPases associated with a variety of cellular activities DA391_11140 SM00382 ATPases associated with a variety of cellular activities DA391_11150 SM00342 helix_turn_helix, arabinose operon control protein DA391_11180 SM00354 helix_turn _helix lactose operon repressor DA391_11185 SM00342 helix_turn_helix, arabinose operon control protein DA391_11280 SM01057 Eukaryotic-type carbonic anhydrase DA391_11320 SM00344 helix_turn_helix ASNC type DA391_11335 SM00062 Bacterial periplasmic substrate-binding proteins DA391_11405 SM00098 Alkaline phosphatase homologues DA391_11420 SM00871 Bacterial transcription activator, effector binding domain DA391_11440 SM00100 Cyclic nucleotide-monophosphate binding domain DA391_11440 SM00419 helix_turn_helix, cAMP Regulatory protein DA391_11455 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DA391_11455 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DA391_11480 SM00448 cheY-homologous receiver domain DA391_11480 SM00862 Transcriptional regulatory protein, C terminal DA391_11485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_11485 SM00387 Histidine kinase-like ATPases DA391_11485 SM00388 His Kinase A (phosphoacceptor) domain DA391_11500 SM00020 Trypsin-like serine protease DA391_11505 SM00530 Helix-turn-helix XRE-family like proteins DA391_11515 SM00382 ATPases associated with a variety of cellular activities DA391_11515 SM00487 DEAD-like helicases superfamily DA391_11515 SM00490 helicase superfamily c-terminal domain DA391_11515 SM00847 Helicase associated domain (HA2) Add an annotation DA391_11590 SM00890 Domain of unknown function DA391_11605 SM01061 CAT RNA binding domain DA391_11630 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DA391_11640 SM00091 PAS domain DA391_11640 SM00382 ATPases associated with a variety of cellular activities DA391_11650 SM00953 DA391_11650 DA391_11685 SM00382 ATPases associated with a variety of cellular activities DA391_11710 SM00382 ATPases associated with a variety of cellular activities DA391_11715 SM00382 ATPases associated with a variety of cellular activities DA391_11735 SM00849 Metallo-beta-lactamase superfamily DA391_11765 SM00363 S4 RNA-binding domain DA391_11790 SM00347 helix_turn_helix multiple antibiotic resistance protein DA391_11840 SM00479 DA391_11840 DA391_11865 SM00354 helix_turn _helix lactose operon repressor DA391_11935 SM00382 ATPases associated with a variety of cellular activities DA391_12040 SM00382 ATPases associated with a variety of cellular activities DA391_12065 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA391_12120 SM00341 Helicase and RNase D C-terminal DA391_12120 SM00474 3'-5' exonuclease DA391_12140 SM00487 DEAD-like helicases superfamily DA391_12140 SM00491 DA391_12140 DA391_12160 SM01276 DA391_12160 DA391_12190 SM00257 Lysin motif DA391_12200 SM00382 ATPases associated with a variety of cellular activities DA391_12210 SM00382 ATPases associated with a variety of cellular activities DA391_12215 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DA391_12275 SM00836 DALR anticodon binding domain DA391_12275 SM01016 Arginyl tRNA synthetase N terminal dom DA391_12315 SM00481 DNA polymerase alpha chain like domain DA391_12335 SM00267 diguanylate cyclase DA391_12365 SM00937 DA391_12365 DA391_12385 SM01400 DA391_12385 DA391_12425 SM00507 HNH nucleases DA391_12505 SM00487 DEAD-like helicases superfamily DA391_12505 SM00490 helicase superfamily c-terminal domain DA391_12555 SM00912 haemagglutination activity domain DA391_12600 SM00947 Carbonic anhydrase DA391_12610 SM00448 cheY-homologous receiver domain DA391_12610 SM00862 Transcriptional regulatory protein, C terminal DA391_12615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_12615 SM00387 Histidine kinase-like ATPases DA391_12615 SM00388 His Kinase A (phosphoacceptor) domain DA391_12650 SM00893 Electron transfer flavoprotein domain DA391_12655 SM00893 Electron transfer flavoprotein domain DA391_12660 SM00342 helix_turn_helix, arabinose operon control protein DA391_12670 SM00882 Coenzyme A transferase DA391_12705 SM00257 Lysin motif DA391_12725 SM00382 ATPases associated with a variety of cellular activities DA391_12745 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA391_12745 SM00866 DA391_12745 DA391_12790 SM00656 DA391_12790 DA391_12795 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA391_12815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_12815 SM00387 Histidine kinase-like ATPases DA391_12900 SM00382 ATPases associated with a variety of cellular activities DA391_12955 SM00354 helix_turn _helix lactose operon repressor DA391_12975 SM00387 Histidine kinase-like ATPases DA391_12980 SM00448 cheY-homologous receiver domain DA391_13210 SM00778 Zinc-binding domain of primase-helicase DA391_13215 SM00487 DEAD-like helicases superfamily DA391_13215 SM00490 helicase superfamily c-terminal domain DA391_13225 SM01040 BRO family, N-terminal domain DA391_13230 SM00530 Helix-turn-helix XRE-family like proteins DA391_13235 SM00530 Helix-turn-helix XRE-family like proteins DA391_13345 SM01329 DA391_13345 DA391_13380 SM00448 cheY-homologous receiver domain DA391_13380 SM00862 Transcriptional regulatory protein, C terminal DA391_13385 SM00387 Histidine kinase-like ATPases DA391_13385 SM00388 His Kinase A (phosphoacceptor) domain DA391_13390 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. DA391_13415 SM00382 ATPases associated with a variety of cellular activities DA391_13425 SM00487 DEAD-like helicases superfamily DA391_13425 SM00490 helicase superfamily c-terminal domain DA391_13425 SM00982 DA391_13425 DA391_13425 SM01058 CarD-like/TRCF domain DA391_13515 SM00825 Beta-ketoacyl synthase DA391_13525 SM00822 DA391_13525 DA391_13530 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DA391_13560 SM00363 S4 RNA-binding domain DA391_13570 SM00316 Ribosomal protein S1-like RNA-binding domain DA391_13600 SM00421 helix_turn_helix, Lux Regulon DA391_13615 SM00450 Rhodanese Homology Domain DA391_13630 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DA391_13645 SM00387 Histidine kinase-like ATPases DA391_13645 SM00388 His Kinase A (phosphoacceptor) domain DA391_13650 SM00421 helix_turn_helix, Lux Regulon DA391_13650 SM00448 cheY-homologous receiver domain DA391_13705 SM01091 Transporter associated domain DA391_13720 SM00421 helix_turn_helix, Lux Regulon DA391_13765 SM00421 helix_turn_helix, Lux Regulon DA391_13790 SM00998 Adenylosuccinate lyase C-terminus DA391_13820 SM00382 ATPases associated with a variety of cellular activities DA391_13840 SM00420 helix_turn_helix, Deoxyribose operon repressor DA391_13840 SM01134 DA391_13840 DA391_13860 SM01133 DA391_13860 DA391_13880 SM00869 Autotransporter beta-domain DA391_14065 SM00778 Zinc-binding domain of primase-helicase DA391_14155 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DA391_14160 SM00992 Hemimethylated DNA-binding protein YccV like DA391_14165 SM00881 CoA binding domain DA391_14175 SM00851 MGS-like domain DA391_14230 SM00825 Beta-ketoacyl synthase DA391_14255 SM00382 ATPases associated with a variety of cellular activities DA391_14260 SM00981 DA391_14260 DA391_14305 SM00052 Putative diguanylate phosphodiesterase DA391_14310 SM00849 Metallo-beta-lactamase superfamily DA391_14365 SM00357 Cold shock protein domain DA391_14375 SM01150 DA391_14375 DA391_14385 SM00382 ATPases associated with a variety of cellular activities DA391_14395 SM00411 bacterial (prokaryotic) histone like domain DA391_14400 SM00316 Ribosomal protein S1-like RNA-binding domain DA391_14425 SM00870 DA391_14425 DA391_14460 SM00382 ATPases associated with a variety of cellular activities DA391_14470 SM00843 DA391_14470 DA391_14475 SM00344 helix_turn_helix ASNC type DA391_14485 SM00382 ATPases associated with a variety of cellular activities DA391_14490 SM00382 ATPases associated with a variety of cellular activities DA391_14500 SM00316 Ribosomal protein S1-like RNA-binding domain DA391_14505 SM00382 ATPases associated with a variety of cellular activities DA391_14505 SM01086 C-terminal, D2-small domain, of ClpB protein DA391_14515 SM00357 Cold shock protein domain DA391_14520 SM00382 ATPases associated with a variety of cellular activities DA391_14585 SM00830 Chorismate mutase type II DA391_14590 SM00382 ATPases associated with a variety of cellular activities DA391_14595 SM00062 Bacterial periplasmic substrate-binding proteins DA391_14595 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DA391_14610 SM00062 Bacterial periplasmic substrate-binding proteins DA391_14610 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DA391_14635 SM00382 ATPases associated with a variety of cellular activities DA391_14690 SM00014 Acid phosphatase homologues DA391_14695 SM01133 DA391_14695 DA391_14700 SM00420 helix_turn_helix, Deoxyribose operon repressor DA391_14700 SM01134 DA391_14700 DA391_14715 SM00936 Penicillin-binding protein 5, C-terminal domain DA391_14720 SM00116 Domain in cystathionine beta-synthase and other proteins. DA391_14745 SM00382 ATPases associated with a variety of cellular activities DA391_14745 SM00930 DA391_14745 DA391_14795 SM00518 AP endonuclease family 2 DA391_14830 SM00841 Elongation factor P, C-terminal DA391_14830 SM01185 DA391_14830 DA391_14850 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA391_14850 SM00895 DA391_14850 DA391_14865 SM00014 Acid phosphatase homologues DA391_14875 SM00052 Putative diguanylate phosphodiesterase DA391_14895 SM00382 ATPases associated with a variety of cellular activities DA391_14910 SM00363 S4 RNA-binding domain DA391_14915 SM00487 DEAD-like helicases superfamily DA391_14915 SM00490 helicase superfamily c-terminal domain DA391_15040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DA391_15040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_15080 SM00382 ATPases associated with a variety of cellular activities DA391_15100 SM00387 Histidine kinase-like ATPases DA391_15100 SM00388 His Kinase A (phosphoacceptor) domain DA391_15105 SM00421 helix_turn_helix, Lux Regulon DA391_15105 SM00448 cheY-homologous receiver domain DA391_15110 SM00387 Histidine kinase-like ATPases DA391_15110 SM00388 His Kinase A (phosphoacceptor) domain DA391_15110 SM00448 cheY-homologous receiver domain DA391_15115 SM00434 DNA Topoisomerase IV DA391_15145 SM00852 Probable molybdopterin binding domain DA391_15160 SM01060 DA391_15160 DA391_15180 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DA391_15235 SM00354 helix_turn _helix lactose operon repressor DA391_15305 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DA391_15305 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DA391_15310 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DA391_15350 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DA391_15390 SM00354 helix_turn _helix lactose operon repressor DA391_15410 SM00382 ATPases associated with a variety of cellular activities DA391_15435 SM00382 ATPases associated with a variety of cellular activities DA391_15470 SM00855 Phosphoglycerate mutase family DA391_15580 SM00881 CoA binding domain DA391_15595 SM00861 Transketolase, pyrimidine binding domain DA391_15645 SM00797 Allophanate hydrolase subunit 2 DA391_15650 SM00796 Allophanate hydrolase subunit 1 DA391_15700 SM00387 Histidine kinase-like ATPases DA391_15700 SM00388 His Kinase A (phosphoacceptor) domain DA391_15705 SM00448 cheY-homologous receiver domain DA391_15705 SM00862 Transcriptional regulatory protein, C terminal DA391_15735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DA391_15755 SM01081 Putative carbohydrate binding domain DA391_15840 SM00729 Elongator protein 3, MiaB family, Radical SAM DA391_15855 SM00116 Domain in cystathionine beta-synthase and other proteins. DA391_15855 SM01091 Transporter associated domain DA391_15870 SM00062 Bacterial periplasmic substrate-binding proteins DA391_15885 SM00382 ATPases associated with a variety of cellular activities DA391_16035 SM01252 DA391_16035 DA391_16140 SM00530 Helix-turn-helix XRE-family like proteins DA391_16270 SM00936 Penicillin-binding protein 5, C-terminal domain DA391_16285 SM00729 Elongator protein 3, MiaB family, Radical SAM DA391_16295 SM00267 diguanylate cyclase DA391_16305 SM00357 Cold shock protein domain DA391_16315 SM00421 helix_turn_helix, Lux Regulon DA391_16340 SM00382 ATPases associated with a variety of cellular activities DA391_16345 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. DA391_16350 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA391_16350 SM00866 DA391_16350 DA391_16355 SM00998 Adenylosuccinate lyase C-terminus DA391_16390 SM00640 Glycosyl hydrolases family 32 DA391_16395 SM00354 helix_turn _helix lactose operon repressor DA391_16535 SM00862 Transcriptional regulatory protein, C terminal DA391_16545 SM00840 DA391_16545 DA391_16560 SM01001 AIR carboxylase DA391_16575 SM00382 ATPases associated with a variety of cellular activities DA391_16585 SM00822 DA391_16585 DA391_16595 SM00244 prohibitin homologues DA391_16700 SM00387 Histidine kinase-like ATPases DA391_16705 SM00493 DA391_16705 DA391_16715 SM00382 ATPases associated with a variety of cellular activities DA391_16800 SM00382 ATPases associated with a variety of cellular activities DA391_16820 SM00869 Autotransporter beta-domain DA391_16860 SM00938 Nitrogen regulatory protein P-II DA391_16865 SM00382 ATPases associated with a variety of cellular activities DA391_16870 SM00382 ATPases associated with a variety of cellular activities DA391_16875 SM00344 helix_turn_helix ASNC type DA391_16915 SM00411 bacterial (prokaryotic) histone like domain DA391_16920 SM00382 ATPases associated with a variety of cellular activities DA391_16920 SM00464 Found in ATP-dependent protease La (LON) DA391_16925 SM00382 ATPases associated with a variety of cellular activities DA391_16925 SM00994 ClpX C4-type zinc finger DA391_16925 SM01086 C-terminal, D2-small domain, of ClpB protein DA391_17010 SM00981 DA391_17010 DA391_17025 SM00861 Transketolase, pyrimidine binding domain DA391_17075 SM01323 DA391_17075 DA391_17115 SM00642 Alpha-amylase domain DA391_17135 SM00091 PAS domain DA391_17135 SM00387 Histidine kinase-like ATPases DA391_17135 SM00388 His Kinase A (phosphoacceptor) domain DA391_17140 SM00448 cheY-homologous receiver domain DA391_17140 SM00862 Transcriptional regulatory protein, C terminal DA391_17200 SM01068 Putative carbohydrate binding domain DA391_17215 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DA391_17275 SM00900 DA391_17275 DA391_17315 SM00710 Parallel beta-helix repeats DA391_17315 SM00912 haemagglutination activity domain DA391_17345 SM01007 Class II Aldolase and Adducin N-terminal domain DA391_17380 SM00347 helix_turn_helix multiple antibiotic resistance protein DA391_17395 SM00967 RNA 2'-O ribose methyltransferase substrate binding DA391_17405 SM01144 DA391_17405 DA391_17410 SM00881 CoA binding domain DA391_17415 SM00155 Phospholipase D. Active site motifs. DA391_17455 SM00382 ATPases associated with a variety of cellular activities DA391_17455 SM01086 C-terminal, D2-small domain, of ClpB protein DA391_17465 SM00363 S4 RNA-binding domain DA391_17490 SM00830 Chorismate mutase type II DA391_17495 SM00830 Chorismate mutase type II DA391_17505 SM00448 cheY-homologous receiver domain DA391_17505 SM00850 LytTr DNA-binding domain DA391_17545 SM00382 ATPases associated with a variety of cellular activities DA391_17545 SM00962 SRP54-type protein, GTPase domain DA391_17545 SM00963 SRP54-type protein, helical bundle domain DA391_17555 SM01091 Transporter associated domain DA391_17605 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DA391_17615 SM00382 ATPases associated with a variety of cellular activities DA391_17645 SM00861 Transketolase, pyrimidine binding domain DA391_17660 SM00382 ATPases associated with a variety of cellular activities DA391_17700 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DA391_17710 SM01007 Class II Aldolase and Adducin N-terminal domain DA391_17735 SM00420 helix_turn_helix, Deoxyribose operon repressor DA391_17735 SM01134 DA391_17735 DA391_17740 SM01007 Class II Aldolase and Adducin N-terminal domain DA391_17745 SM00420 helix_turn_helix, Deoxyribose operon repressor DA391_17745 SM01134 DA391_17745 DA391_17755 SM00382 ATPases associated with a variety of cellular activities DA391_17805 SM00382 ATPases associated with a variety of cellular activities DA391_17820 SM01012 DA391_17820 DA391_17860 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DA391_17865 SM00838 Elongation factor G C-terminus DA391_17865 SM00889 Elongation factor G, domain IV DA391_17870 SM00530 Helix-turn-helix XRE-family like proteins DA391_17885 SM00382 ATPases associated with a variety of cellular activities DA391_17900 SM00062 Bacterial periplasmic substrate-binding proteins DA391_17925 SM00382 ATPases associated with a variety of cellular activities DA391_17930 SM00382 ATPases associated with a variety of cellular activities DA391_17950 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DA391_17960 SM00062 Bacterial periplasmic substrate-binding proteins DA391_17970 SM00822 DA391_17970 DA391_17985 SM00825 Beta-ketoacyl synthase DA391_17995 SM00382 ATPases associated with a variety of cellular activities DA391_18005 SM00382 ATPases associated with a variety of cellular activities DA391_18165 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DA391_18165 SM00534 ATPase domain of DNA mismatch repair MUTS family DA391_18175 SM00257 Lysin motif DA391_18215 SM00062 Bacterial periplasmic substrate-binding proteins DA391_18215 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DA391_18225 SM00382 ATPases associated with a variety of cellular activities DA391_18290 SM01192 DA391_18290 DA391_18290 SM01193 DA391_18290 DA391_18305 SM00954 Region found in RelA / SpoT proteins DA391_18315 SM00073 Histidine Phosphotransfer domain DA391_18315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_18315 SM00387 Histidine kinase-like ATPases DA391_18315 SM00388 His Kinase A (phosphoacceptor) domain DA391_18315 SM00448 cheY-homologous receiver domain DA391_18320 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DA391_18325 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DA391_18380 SM00382 ATPases associated with a variety of cellular activities DA391_18390 SM00487 DEAD-like helicases superfamily DA391_18390 SM00490 helicase superfamily c-terminal domain DA391_18390 SM00847 Helicase associated domain (HA2) Add an annotation DA391_18455 SM00382 ATPases associated with a variety of cellular activities DA391_18460 SM00947 Carbonic anhydrase DA391_18515 SM00342 helix_turn_helix, arabinose operon control protein DA391_18535 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA391_18535 SM00895 DA391_18535 DA391_18545 SM00634 Bacterial Ig-like domain (group 1) DA391_18555 SM00644 DA391_18555 DA391_18580 SM01240 DA391_18580 DA391_18610 SM00957 SecA DEAD-like domain DA391_18610 SM00958 SecA preprotein cross-linking domain DA391_18630 SM00864 Tubulin/FtsZ family, GTPase domain DA391_18630 SM00865 Tubulin/FtsZ family, C-terminal domain DA391_18635 SM00842 Cell division protein FtsA DA391_18710 SM00354 helix_turn _helix lactose operon repressor DA391_18740 SM00917 LeuA allosteric (dimerisation) domain DA391_18745 SM01329 DA391_18745 DA391_18805 SM00382 ATPases associated with a variety of cellular activities DA391_18815 SM00486 DNA polymerase type-B family DA391_18820 SM00487 DEAD-like helicases superfamily DA391_18820 SM00490 helicase superfamily c-terminal domain DA391_18840 SM01006 Siderophore biosynthesis protein domain DA391_18870 SM00271 DnaJ molecular chaperone homology domain DA391_18890 SM00650 Ribosomal RNA adenine dimethylases DA391_18925 SM00851 MGS-like domain DA391_18925 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DA391_18930 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DA391_18960 SM00904 Riboflavin kinase DA391_18995 SM00271 DnaJ molecular chaperone homology domain DA391_19020 SM00852 Probable molybdopterin binding domain DA391_19060 SM00448 cheY-homologous receiver domain DA391_19060 SM00862 Transcriptional regulatory protein, C terminal DA391_19075 SM00342 helix_turn_helix, arabinose operon control protein DA391_19075 SM00871 Bacterial transcription activator, effector binding domain DA391_19080 SM00855 Phosphoglycerate mutase family DA391_19100 SM00831 Cation transporter/ATPase, N-terminus DA391_19110 SM00267 diguanylate cyclase DA391_19120 SM00382 ATPases associated with a variety of cellular activities DA391_19130 SM00342 helix_turn_helix, arabinose operon control protein DA391_19135 SM00342 helix_turn_helix, arabinose operon control protein DA391_19155 SM01007 Class II Aldolase and Adducin N-terminal domain DA391_19175 SM00829 Enoylreductase DA391_19180 SM00530 Helix-turn-helix XRE-family like proteins DA391_19185 SM00382 ATPases associated with a variety of cellular activities DA391_19220 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain DA391_19225 SM01133 DA391_19225 DA391_19250 SM00749 bacterial OsmY and nodulation domain DA391_19305 SM00267 diguanylate cyclase DA391_19310 SM00091 PAS domain DA391_19350 SM01120 DA391_19350 DA391_19405 SM00382 ATPases associated with a variety of cellular activities DA391_19425 SM01133 DA391_19425 DA391_19445 SM00530 Helix-turn-helix XRE-family like proteins DA391_19460 SM00421 helix_turn_helix, Lux Regulon DA391_19475 SM00382 ATPases associated with a variety of cellular activities DA391_19520 SM00778 Zinc-binding domain of primase-helicase DA391_19520 SM00885 D5 N terminal like DA391_19600 SM00382 ATPases associated with a variety of cellular activities DA391_19605 SM00382 ATPases associated with a variety of cellular activities DA391_19640 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA391_19640 SM00866 DA391_19640 DA391_19665 SM00382 ATPases associated with a variety of cellular activities DA391_19670 SM00382 ATPases associated with a variety of cellular activities DA391_19680 SM00072 Guanylate kinase homologues. DA391_19690 SM00859 Semialdehyde dehydrogenase, NAD binding domain DA391_19705 SM00382 ATPases associated with a variety of cellular activities DA391_19790 SM00487 DEAD-like helicases superfamily DA391_19790 SM00490 helicase superfamily c-terminal domain DA391_19800 SM00028 Tetratricopeptide repeats DA391_19805 SM00316 Ribosomal protein S1-like RNA-binding domain DA391_19805 SM00322 K homology RNA-binding domain DA391_19810 SM01387 DA391_19810 DA391_19830 SM00316 Ribosomal protein S1-like RNA-binding domain DA391_19830 SM00322 K homology RNA-binding domain DA391_19865 SM00382 ATPases associated with a variety of cellular activities DA391_19875 SM01103 DA391_19875 DA391_19890 SM00448 cheY-homologous receiver domain DA391_19890 SM00862 Transcriptional regulatory protein, C terminal DA391_19895 SM00387 Histidine kinase-like ATPases DA391_19895 SM00388 His Kinase A (phosphoacceptor) domain DA391_19960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DA391_19960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_19990 SM01091 Transporter associated domain DA391_20260 SM00530 Helix-turn-helix XRE-family like proteins DA391_20285 SM00382 ATPases associated with a variety of cellular activities DA391_20345 SM00967 RNA 2'-O ribose methyltransferase substrate binding DA391_20350 SM00316 Ribosomal protein S1-like RNA-binding domain DA391_20350 SM00357 Cold shock protein domain DA391_20350 SM00955 DA391_20350 DA391_20360 SM00788 Adenylosuccinate synthetase DA391_20370 SM00244 prohibitin homologues DA391_20375 SM00244 prohibitin homologues DA391_20395 SM00853 MutL C terminal dimerisation domain DA391_20395 SM01340 DA391_20395 DA391_20400 SM00257 Lysin motif DA391_20400 SM00646 DA391_20400 DA391_20440 SM00479 DA391_20440 DA391_20510 SM00841 Elongation factor P, C-terminal DA391_20510 SM01185 DA391_20510 DA391_20530 SM00883 Chaperonin 10 Kd subunit DA391_20560 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DA391_20585 SM00858 DA391_20585 DA391_20690 SM00028 Tetratricopeptide repeats DA391_20705 SM00729 Elongator protein 3, MiaB family, Radical SAM DA391_20745 SM00382 ATPases associated with a variety of cellular activities DA391_20750 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA391_20835 SM00382 ATPases associated with a variety of cellular activities DA391_20860 SM00342 helix_turn_helix, arabinose operon control protein DA391_20915 SM00421 helix_turn_helix, Lux Regulon DA391_20915 SM00448 cheY-homologous receiver domain DA391_20920 SM00062 Bacterial periplasmic substrate-binding proteins DA391_20920 SM00387 Histidine kinase-like ATPases DA391_20920 SM00388 His Kinase A (phosphoacceptor) domain DA391_20920 SM00448 cheY-homologous receiver domain DA391_20930 SM00324 GTPase-activator protein for Rho-like GTPases DA391_20960 SM00382 ATPases associated with a variety of cellular activities DA391_21015 SM00495 Chitin-binding domain type 3 DA391_21030 SM00382 ATPases associated with a variety of cellular activities DA391_21035 SM00965 Secretin and TonB N terminus short domain DA391_21060 SM00530 Helix-turn-helix XRE-family like proteins DA391_21110 SM00382 ATPases associated with a variety of cellular activities DA391_21160 SM00342 helix_turn_helix, arabinose operon control protein DA391_21170 SM00028 Tetratricopeptide repeats DA391_21225 SM00387 Histidine kinase-like ATPases DA391_21225 SM00388 His Kinase A (phosphoacceptor) domain DA391_21225 SM00448 cheY-homologous receiver domain DA391_21230 SM00421 helix_turn_helix, Lux Regulon DA391_21230 SM00448 cheY-homologous receiver domain DA391_21300 SM00798 AICARFT/IMPCHase bienzyme DA391_21300 SM00851 MGS-like domain DA391_21305 SM01209 DA391_21305 DA391_21305 SM01210 DA391_21305 DA391_21315 SM00411 bacterial (prokaryotic) histone like domain DA391_21370 SM00876 Biotin and Thiamin Synthesis associated domain DA391_21375 SM00663 RNA polymerase I subunit A N-terminus DA391_21400 SM00649 Ribosomal protein L11/L12 DA391_21405 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DA391_21405 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DA391_21525 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DA391_21530 SM01004 Delta-aminolevulinic acid dehydratase DA391_21625 SM00382 ATPases associated with a variety of cellular activities DA391_21675 SM00382 ATPases associated with a variety of cellular activities DA391_21680 SM00382 ATPases associated with a variety of cellular activities DA391_21720 SM00382 ATPases associated with a variety of cellular activities DA391_21725 SM00382 ATPases associated with a variety of cellular activities DA391_21725 SM00962 SRP54-type protein, GTPase domain DA391_21725 SM00963 SRP54-type protein, helical bundle domain DA391_21820 SM00341 Helicase and RNase D C-terminal DA391_21820 SM00487 DEAD-like helicases superfamily DA391_21820 SM00490 helicase superfamily c-terminal domain DA391_21820 SM00956 DA391_21820 DA391_21895 SM01219 DA391_21895 DA391_21990 SM00984 UDP binding domain DA391_22010 SM00357 Cold shock protein domain DA391_22010 SM00382 ATPases associated with a variety of cellular activities DA391_22010 SM00959 Rho termination factor, N-terminal domain DA391_22020 SM00487 DEAD-like helicases superfamily DA391_22020 SM00490 helicase superfamily c-terminal domain DA391_22030 SM00060 Fibronectin type 3 domain DA391_22115 SM00382 ATPases associated with a variety of cellular activities DA391_22140 SM00382 ATPases associated with a variety of cellular activities DA391_22245 SM00382 ATPases associated with a variety of cellular activities DA391_22270 SM00859 Semialdehyde dehydrogenase, NAD binding domain DA391_22330 SM00382 ATPases associated with a variety of cellular activities DA391_22330 SM01086 C-terminal, D2-small domain, of ClpB protein DA391_22345 SM00354 helix_turn _helix lactose operon repressor DA391_22350 SM00487 DEAD-like helicases superfamily DA391_22350 SM00490 helicase superfamily c-terminal domain DA391_22425 SM00448 cheY-homologous receiver domain DA391_22425 SM00862 Transcriptional regulatory protein, C terminal DA391_22430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_22430 SM00387 Histidine kinase-like ATPases DA391_22430 SM00388 His Kinase A (phosphoacceptor) domain DA391_22435 SM00342 helix_turn_helix, arabinose operon control protein DA391_22445 SM00971 Serine acetyltransferase, N-terminal DA391_22465 SM00450 Rhodanese Homology Domain DA391_22485 SM00829 Enoylreductase DA391_22525 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DA391_22525 SM01232 DA391_22525 DA391_22575 SM00052 Putative diguanylate phosphodiesterase DA391_22580 SM00382 ATPases associated with a variety of cellular activities DA391_22585 SM00382 ATPases associated with a variety of cellular activities DA391_22605 SM00912 haemagglutination activity domain DA391_22625 SM00387 Histidine kinase-like ATPases DA391_22630 SM00421 helix_turn_helix, Lux Regulon DA391_22630 SM00448 cheY-homologous receiver domain DA391_22665 SM00052 Putative diguanylate phosphodiesterase DA391_22665 SM00091 PAS domain DA391_22665 SM00267 diguanylate cyclase DA391_22690 SM00532 Ligase N family DA391_22695 SM00072 Guanylate kinase homologues. DA391_22700 SM01409 DA391_22700 DA391_22705 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DA391_22705 SM00954 Region found in RelA / SpoT proteins DA391_22715 SM00487 DEAD-like helicases superfamily DA391_22715 SM00490 helicase superfamily c-terminal domain DA391_22745 SM00382 ATPases associated with a variety of cellular activities DA391_22775 SM01230 DA391_22775 DA391_22780 SM00091 PAS domain DA391_22780 SM00387 Histidine kinase-like ATPases DA391_22780 SM00388 His Kinase A (phosphoacceptor) domain DA391_22785 SM00382 ATPases associated with a variety of cellular activities DA391_22785 SM00448 cheY-homologous receiver domain DA391_22790 SM00729 Elongator protein 3, MiaB family, Radical SAM DA391_22815 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DA391_22815 SM00474 3'-5' exonuclease DA391_22815 SM00475 5'-3' exonuclease DA391_22815 SM00482 DNA polymerase A domain DA391_22870 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA391_22870 SM00895 DA391_22870 DA391_22880 SM00354 helix_turn _helix lactose operon repressor DA391_22900 SM00382 ATPases associated with a variety of cellular activities DA391_22915 SM00382 ATPases associated with a variety of cellular activities DA391_22920 SM00327 von Willebrand factor (vWF) type A domain DA391_22935 SM00344 helix_turn_helix ASNC type DA391_22945 SM01228 DA391_22945 DA391_22990 SM00382 ATPases associated with a variety of cellular activities DA391_23025 SM00382 ATPases associated with a variety of cellular activities DA391_23035 SM00062 Bacterial periplasmic substrate-binding proteins DA391_23065 SM00421 helix_turn_helix, Lux Regulon DA391_23065 SM00448 cheY-homologous receiver domain DA391_23070 SM00387 Histidine kinase-like ATPases DA391_23070 SM00388 His Kinase A (phosphoacceptor) domain DA391_23080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DA391_23080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA391_23090 SM00382 ATPases associated with a variety of cellular activities DA391_23090 SM00930 DA391_23090 DA391_23135 SM01234 DA391_23135 DA391_23155 SM00869 Autotransporter beta-domain DA391_23160 SM00421 helix_turn_helix, Lux Regulon DA391_23200 SM00857 Resolvase, N terminal domain DA391_23305 SM00470 ParB-like nuclease domain DA391_23345 SM00530 Helix-turn-helix XRE-family like proteins DA391_23355 SM00530 Helix-turn-helix XRE-family like proteins DA391_23395 SM00470 ParB-like nuclease domain DA391_23640 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DA391_23655 SM00901 DA391_23655 DA391_23665 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DA391_23690 SM00857 Resolvase, N terminal domain DA391_23725 SM00421 helix_turn_helix, Lux Regulon DA391_23770 SM00530 Helix-turn-helix XRE-family like proteins DA391_23800 SM00493 DA391_23800 DA391_23940 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DA391_24005 SM00530 Helix-turn-helix XRE-family like proteins DA391_24015 SM00382 ATPases associated with a variety of cellular activities DA391_24050 SM00470 ParB-like nuclease domain DA391_24120 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DA391_24120 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DA391_24120 SM00493 DA391_24120